Query 044410
Match_columns 402
No_of_seqs 202 out of 1899
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 03:02:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044410.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044410hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03172 chalcone synthase fam 100.0 2.9E-64 6.4E-69 497.2 38.3 378 15-395 9-387 (393)
2 PLN03170 chalcone synthase; Pr 100.0 2.4E-64 5.2E-69 499.5 35.0 377 15-394 13-390 (401)
3 PLN03168 chalcone synthase; Pr 100.0 1.8E-63 4E-68 491.8 36.2 377 16-395 9-386 (389)
4 PLN03173 chalcone synthase; Pr 100.0 2E-63 4.3E-68 491.0 34.5 378 15-395 9-387 (391)
5 PLN03169 chalcone synthase fam 100.0 1.6E-61 3.5E-66 479.0 35.2 368 17-394 16-388 (391)
6 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 2.8E-62 6E-67 464.3 22.8 313 24-395 4-323 (323)
7 PLN03171 chalcone synthase-lik 100.0 5.6E-60 1.2E-64 468.8 35.8 375 15-398 15-398 (399)
8 cd00831 CHS_like Chalcone and 100.0 8.5E-56 1.9E-60 436.2 34.3 354 24-392 2-361 (361)
9 COG3424 BcsA Predicted naringe 100.0 3.4E-54 7.4E-59 392.1 29.3 352 24-397 2-355 (356)
10 PRK12880 3-oxoacyl-(acyl carri 100.0 7.5E-53 1.6E-57 412.3 25.5 317 24-399 8-343 (353)
11 PRK05963 3-oxoacyl-(acyl carri 100.0 2E-52 4.3E-57 406.9 25.6 312 24-394 4-326 (326)
12 PLN02326 3-oxoacyl-[acyl-carri 100.0 6.9E-52 1.5E-56 410.2 26.0 319 18-394 43-379 (379)
13 PRK07204 3-oxoacyl-(acyl carri 100.0 3.2E-51 6.9E-56 399.0 26.5 314 24-394 5-329 (329)
14 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 8.8E-51 1.9E-55 395.2 23.0 313 24-395 3-326 (326)
15 PRK12879 3-oxoacyl-(acyl carri 100.0 2.8E-50 6.1E-55 391.6 25.7 314 24-395 5-325 (325)
16 PRK09258 3-oxoacyl-(acyl carri 100.0 6.8E-50 1.5E-54 391.0 24.5 320 24-394 6-338 (338)
17 PLN02932 3-ketoacyl-CoA syntha 100.0 5.3E-49 1.1E-53 392.2 29.6 352 21-396 66-455 (478)
18 cd00830 KAS_III Ketoacyl-acyl 100.0 1.9E-48 4.1E-53 377.8 23.2 306 24-392 2-320 (320)
19 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 6.2E-48 1.3E-52 374.1 24.0 310 24-394 3-318 (318)
20 PRK06840 hypothetical protein; 100.0 2E-47 4.4E-52 373.7 27.7 317 24-397 5-338 (339)
21 PLN02377 3-ketoacyl-CoA syntha 100.0 2.1E-46 4.6E-51 375.6 32.8 351 21-397 96-480 (502)
22 PRK04262 hypothetical protein; 100.0 2E-47 4.3E-52 374.5 23.6 303 24-396 3-310 (347)
23 PRK09352 3-oxoacyl-(acyl carri 100.0 7.3E-47 1.6E-51 366.7 26.1 310 24-395 4-319 (319)
24 PRK06816 3-oxoacyl-(acyl carri 100.0 4.6E-47 1E-51 375.6 24.0 330 24-395 3-378 (378)
25 PLN02854 3-ketoacyl-CoA syntha 100.0 4.3E-46 9.3E-51 373.2 30.3 350 21-397 112-496 (521)
26 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 8.9E-47 1.9E-51 369.0 22.8 304 24-396 2-309 (345)
27 PLN02192 3-ketoacyl-CoA syntha 100.0 1.2E-45 2.6E-50 369.2 29.5 351 21-397 100-484 (511)
28 PRK07515 3-oxoacyl-(acyl carri 100.0 2.3E-46 5.1E-51 370.4 23.5 342 24-394 3-371 (372)
29 PLN00415 3-ketoacyl-CoA syntha 100.0 1.8E-44 4E-49 355.4 29.9 347 21-396 58-441 (466)
30 cd00827 init_cond_enzymes "ini 100.0 3.4E-43 7.4E-48 341.6 21.2 307 24-392 2-324 (324)
31 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 2.3E-40 4.9E-45 327.4 27.3 304 24-395 1-318 (379)
32 PF00195 Chal_sti_synt_N: Chal 100.0 6.2E-39 1.3E-43 289.7 19.2 222 13-235 5-226 (226)
33 PLN02577 hydroxymethylglutaryl 100.0 1.3E-36 2.9E-41 302.8 25.6 303 24-396 5-372 (459)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 6.3E-35 1.4E-39 278.0 23.0 305 24-395 3-311 (377)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 1.6E-32 3.5E-37 273.1 23.2 310 24-397 2-376 (454)
36 cd00327 cond_enzymes Condensin 100.0 9.3E-30 2E-34 238.6 15.5 236 109-392 7-254 (254)
37 cd00825 decarbox_cond_enzymes 99.9 8E-28 1.7E-32 234.3 12.6 254 109-392 11-332 (332)
38 PF08392 FAE1_CUT1_RppA: FAE1/ 99.9 7.1E-26 1.5E-30 210.1 23.7 255 21-294 7-268 (290)
39 PF02797 Chal_sti_synt_C: Chal 99.9 2.2E-25 4.7E-30 190.8 17.4 149 246-395 1-150 (151)
40 PRK06147 3-oxoacyl-(acyl carri 99.9 5.2E-21 1.1E-25 187.4 18.4 280 64-398 46-346 (348)
41 PF08541 ACP_syn_III_C: 3-Oxoa 99.9 9.2E-22 2E-26 154.9 8.1 89 295-394 1-90 (90)
42 TIGR02845 spore_V_AD stage V s 99.8 5.6E-19 1.2E-23 166.3 20.9 250 108-399 49-319 (327)
43 PRK08304 stage V sporulation p 99.8 3.9E-18 8.6E-23 160.9 20.8 256 108-399 55-326 (337)
44 PF01154 HMG_CoA_synt_N: Hydro 99.8 1.4E-19 3E-24 156.1 9.7 164 24-235 5-173 (174)
45 cd00834 KAS_I_II Beta-ketoacyl 99.7 1.5E-16 3.2E-21 159.4 18.8 259 106-392 68-406 (406)
46 PRK05656 acetyl-CoA acetyltran 99.7 5.9E-16 1.3E-20 154.1 19.2 95 108-203 25-120 (393)
47 smart00825 PKS_KS Beta-ketoacy 99.7 5.9E-16 1.3E-20 156.1 19.2 262 104-393 82-422 (424)
48 cd00751 thiolase Thiolase are 99.7 5.2E-16 1.1E-20 154.4 18.0 252 108-393 21-385 (386)
49 PRK09051 beta-ketothiolase; Pr 99.7 2.7E-15 5.8E-20 149.2 19.5 95 108-203 26-122 (394)
50 PRK12404 stage V sporulation p 99.7 9.5E-15 2E-19 137.3 20.7 257 107-399 52-324 (334)
51 PRK06064 acetyl-CoA acetyltran 99.7 5.3E-15 1.1E-19 147.4 19.6 252 108-384 21-376 (389)
52 TIGR01930 AcCoA-C-Actrans acet 99.7 2.5E-15 5.4E-20 149.4 16.7 94 108-203 20-115 (386)
53 PRK07108 acetyl-CoA acetyltran 99.6 4.2E-15 9.1E-20 147.7 17.0 95 108-203 26-122 (392)
54 PRK08242 acetyl-CoA acetyltran 99.6 1.5E-14 3.2E-19 143.8 19.9 95 108-203 27-123 (402)
55 PRK05790 putative acyltransfer 99.6 1.5E-14 3.3E-19 144.3 19.8 253 108-394 25-392 (393)
56 KOG1393 Hydroxymethylglutaryl- 99.6 1.6E-14 3.5E-19 136.0 17.6 308 24-396 12-378 (462)
57 PRK09052 acetyl-CoA acetyltran 99.6 1.2E-14 2.6E-19 144.6 17.5 95 108-203 30-127 (399)
58 cd00829 SCP-x_thiolase Thiolas 99.6 3.6E-14 7.8E-19 140.8 20.3 233 108-360 15-343 (375)
59 cd00828 elong_cond_enzymes "el 99.6 1.9E-14 4.2E-19 144.3 18.5 257 107-392 70-407 (407)
60 PRK08235 acetyl-CoA acetyltran 99.6 2.8E-14 6.1E-19 141.9 18.7 95 108-203 25-120 (393)
61 TIGR03150 fabF beta-ketoacyl-a 99.6 2.5E-14 5.4E-19 143.4 18.2 261 105-393 67-407 (407)
62 PRK06205 acetyl-CoA acetyltran 99.6 3E-14 6.6E-19 142.3 17.3 95 108-203 25-120 (404)
63 PRK12578 acetyl-CoA acetyltran 99.6 9.9E-14 2.2E-18 138.0 20.4 234 108-360 20-349 (385)
64 PRK06954 acetyl-CoA acetyltran 99.6 4.6E-14 9.9E-19 140.7 16.9 95 108-203 30-125 (397)
65 PRK06059 lipid-transfer protei 99.6 1.5E-13 3.2E-18 137.4 19.8 274 109-393 23-398 (399)
66 PRK08313 acetyl-CoA acetyltran 99.6 2.1E-13 4.6E-18 135.5 20.7 257 108-391 23-379 (386)
67 cd00833 PKS polyketide synthas 99.6 5.6E-14 1.2E-18 141.4 16.3 227 105-358 83-359 (421)
68 PRK06445 acetyl-CoA acetyltran 99.6 1.4E-13 2.9E-18 137.3 17.6 252 108-394 31-393 (394)
69 PRK07314 3-oxoacyl-(acyl carri 99.5 1.3E-13 2.9E-18 138.4 17.2 261 106-394 69-409 (411)
70 PRK06501 3-oxoacyl-(acyl carri 99.5 1.9E-13 4.2E-18 137.6 18.2 259 109-395 75-423 (425)
71 PRK08722 3-oxoacyl-(acyl carri 99.5 7.7E-13 1.7E-17 132.7 22.1 259 105-394 70-413 (414)
72 PRK07661 acetyl-CoA acetyltran 99.5 2.6E-13 5.7E-18 134.8 17.5 94 108-203 26-122 (391)
73 PLN02787 3-oxoacyl-[acyl-carri 99.5 1.9E-12 4E-17 133.0 23.6 261 105-394 195-538 (540)
74 PRK07850 acetyl-CoA acetyltran 99.5 1.2E-12 2.5E-17 130.0 20.7 95 108-203 25-121 (387)
75 PRK07851 acetyl-CoA acetyltran 99.5 3.8E-13 8.1E-18 134.4 16.3 94 108-203 26-122 (406)
76 PRK06025 acetyl-CoA acetyltran 99.5 7.3E-13 1.6E-17 131.3 17.9 95 108-203 28-124 (417)
77 PRK06333 3-oxoacyl-(acyl carri 99.5 1E-12 2.2E-17 132.6 18.5 263 103-394 76-421 (424)
78 PLN02287 3-ketoacyl-CoA thiola 99.5 2.1E-12 4.6E-17 130.2 19.6 95 108-203 70-166 (452)
79 PLN02644 acetyl-CoA C-acetyltr 99.5 1.9E-12 4.2E-17 129.0 19.1 94 108-202 24-118 (394)
80 PRK06633 acetyl-CoA acetyltran 99.5 1.3E-12 2.9E-17 129.5 17.5 95 108-203 26-121 (392)
81 PRK06065 acetyl-CoA acetyltran 99.5 8.5E-12 1.8E-16 124.0 23.1 234 108-360 28-356 (392)
82 PRK06158 thiolase; Provisional 99.5 3.3E-12 7.2E-17 126.9 19.9 228 109-360 28-345 (384)
83 cd00826 nondecarbox_cond_enzym 99.5 1.5E-12 3.2E-17 129.7 17.2 94 108-203 22-117 (393)
84 PRK07103 polyketide beta-ketoa 99.5 1.4E-12 3.1E-17 130.8 16.7 256 108-393 79-409 (410)
85 PRK06690 acetyl-CoA acetyltran 99.5 2.9E-12 6.3E-17 125.6 18.2 222 109-359 25-335 (361)
86 PRK08256 lipid-transfer protei 99.5 5.3E-12 1.1E-16 125.9 20.2 260 108-389 21-385 (391)
87 PRK08963 fadI 3-ketoacyl-CoA t 99.4 6.6E-12 1.4E-16 126.4 20.1 95 108-203 28-123 (428)
88 PRK13359 beta-ketoadipyl CoA t 99.4 4.2E-12 9.2E-17 126.3 18.4 95 108-203 25-122 (400)
89 PRK07910 3-oxoacyl-(acyl carri 99.4 1.5E-11 3.3E-16 123.4 22.4 334 13-394 4-417 (418)
90 PRK07516 acetyl-CoA acetyltran 99.4 7E-12 1.5E-16 124.9 19.7 230 108-360 21-352 (389)
91 PRK09116 3-oxoacyl-(acyl carri 99.4 3.6E-12 7.8E-17 127.5 17.5 255 106-393 70-405 (405)
92 PRK06289 acetyl-CoA acetyltran 99.4 4.7E-12 1E-16 126.7 18.4 237 108-360 25-368 (403)
93 TIGR02430 pcaF beta-ketoadipyl 99.4 2.1E-12 4.6E-17 128.5 15.7 95 108-203 24-121 (400)
94 PTZ00050 3-oxoacyl-acyl carrie 99.4 4.1E-12 9E-17 127.9 17.7 259 108-394 76-420 (421)
95 PRK08439 3-oxoacyl-(acyl carri 99.4 8.6E-12 1.9E-16 125.0 19.6 255 105-394 68-405 (406)
96 PRK06366 acetyl-CoA acetyltran 99.4 9.6E-12 2.1E-16 123.7 19.3 94 108-202 25-119 (388)
97 PRK05952 3-oxoacyl-(acyl carri 99.4 1.3E-11 2.7E-16 122.4 19.6 251 111-393 58-380 (381)
98 PRK09050 beta-ketoadipyl CoA t 99.4 4.8E-12 1E-16 126.1 16.7 95 108-203 25-122 (401)
99 PRK09185 3-oxoacyl-(acyl carri 99.4 2.6E-11 5.6E-16 121.0 21.6 213 146-395 138-391 (392)
100 PRK08131 acetyl-CoA acetyltran 99.4 7.6E-12 1.6E-16 124.7 17.4 95 108-203 25-121 (401)
101 PRK06519 3-oxoacyl-(acyl carri 99.4 3.8E-11 8.3E-16 119.4 22.2 248 107-394 71-396 (398)
102 PRK14691 3-oxoacyl-(acyl carri 99.4 2.3E-11 4.9E-16 118.7 19.8 253 109-394 4-339 (342)
103 PRK06504 acetyl-CoA acetyltran 99.4 2.1E-11 4.6E-16 121.0 19.8 95 108-203 25-121 (390)
104 TIGR02446 FadI fatty oxidation 99.4 2.8E-11 6.1E-16 121.6 19.9 95 108-203 30-125 (430)
105 PRK07801 acetyl-CoA acetyltran 99.4 2E-11 4.3E-16 121.4 18.4 254 108-394 25-381 (382)
106 cd00832 CLF Chain-length facto 99.4 2.1E-11 4.5E-16 121.8 18.5 253 105-392 67-399 (399)
107 PF08545 ACP_syn_III: 3-Oxoacy 99.4 7.5E-13 1.6E-17 101.6 5.9 66 165-236 1-66 (80)
108 PLN02836 3-oxoacyl-[acyl-carri 99.4 1.5E-11 3.2E-16 124.4 16.1 260 108-395 92-436 (437)
109 PRK08947 fadA 3-ketoacyl-CoA t 99.3 4.6E-11 9.9E-16 118.8 18.5 94 109-203 27-123 (387)
110 PRK06157 acetyl-CoA acetyltran 99.3 1.3E-10 2.9E-15 116.0 20.2 92 109-202 27-119 (398)
111 PRK06365 acetyl-CoA acetyltran 99.3 1.8E-10 3.9E-15 115.9 20.6 92 109-202 37-130 (430)
112 TIGR02445 fadA fatty oxidation 99.3 8.2E-11 1.8E-15 116.8 17.9 95 108-203 24-121 (385)
113 PRK06066 acetyl-CoA acetyltran 99.3 8.6E-10 1.9E-14 109.2 22.2 230 108-360 24-350 (385)
114 PRK07967 3-oxoacyl-(acyl carri 99.3 4.3E-10 9.4E-15 112.4 19.3 254 104-395 66-404 (406)
115 PRK08257 acetyl-CoA acetyltran 99.2 5.9E-10 1.3E-14 114.0 20.2 260 109-394 27-397 (498)
116 PRK08142 acetyl-CoA acetyltran 99.2 6.1E-10 1.3E-14 110.6 19.6 228 109-360 25-348 (388)
117 PF07451 SpoVAD: Stage V sporu 99.2 7.7E-10 1.7E-14 102.7 18.5 245 107-386 49-309 (329)
118 COG0304 FabB 3-oxoacyl-(acyl-c 99.2 2.7E-10 5.8E-15 113.0 15.5 267 99-394 61-410 (412)
119 TIGR02813 omega_3_PfaA polyket 99.2 1.9E-09 4E-14 127.0 21.2 221 147-395 185-462 (2582)
120 PRK08170 acetyl-CoA acetyltran 99.2 1.5E-10 3.2E-15 116.6 10.4 95 108-203 26-121 (426)
121 PF00108 Thiolase_N: Thiolase, 99.1 2.1E-10 4.6E-15 108.2 9.8 95 108-203 25-120 (264)
122 PRK07855 lipid-transfer protei 99.0 1.9E-08 4.1E-13 100.1 19.7 85 109-198 24-108 (386)
123 KOG1390 Acetyl-CoA acetyltrans 99.0 1.6E-09 3.5E-14 100.5 8.0 94 109-203 30-124 (396)
124 KOG1394 3-oxoacyl-(acyl-carrie 98.9 2.6E-09 5.5E-14 100.7 8.0 221 99-348 84-368 (440)
125 PTZ00455 3-ketoacyl-CoA thiola 98.9 1.1E-08 2.4E-13 103.1 10.8 94 108-203 47-152 (438)
126 PRK07937 lipid-transfer protei 98.8 3.6E-07 7.9E-12 89.6 19.8 240 110-383 25-337 (352)
127 PF00109 ketoacyl-synt: Beta-k 98.8 2.3E-08 4.9E-13 93.7 10.9 132 96-234 74-251 (254)
128 PRK09268 acetyl-CoA acetyltran 98.7 5.3E-08 1.1E-12 98.0 10.5 95 108-203 30-125 (427)
129 COG3321 Polyketide synthase mo 98.7 7.4E-07 1.6E-11 98.9 18.7 347 21-395 4-427 (1061)
130 KOG1389 3-oxoacyl CoA thiolase 98.4 1.9E-06 4.1E-11 80.2 10.8 94 109-203 61-155 (435)
131 COG0183 PaaJ Acetyl-CoA acetyl 98.1 9.8E-06 2.1E-10 80.8 9.2 94 109-203 27-124 (392)
132 KOG1406 Peroxisomal 3-ketoacyl 97.9 1.5E-05 3.2E-10 72.8 5.3 91 109-203 29-119 (408)
133 KOG1391 Acetyl-CoA acetyltrans 97.5 0.00014 3E-09 66.3 5.5 95 108-203 27-123 (396)
134 KOG1392 Acetyl-CoA acetyltrans 97.1 0.00048 1E-08 63.8 3.4 93 109-202 66-159 (465)
135 PF08540 HMG_CoA_synt_C: Hydro 97.0 0.0044 9.5E-08 58.7 9.4 53 339-396 151-203 (282)
136 PF13723 Ketoacyl-synt_2: Beta 96.3 0.036 7.7E-07 50.6 10.3 115 108-236 33-172 (218)
137 PF02803 Thiolase_C: Thiolase, 96.0 0.031 6.7E-07 46.3 7.2 97 288-393 25-122 (123)
138 KOG1202 Animal-type fatty acid 95.9 0.034 7.4E-07 60.8 8.8 258 109-396 87-417 (2376)
139 PF08541 ACP_syn_III_C: 3-Oxoa 95.1 0.036 7.8E-07 43.0 4.5 74 121-199 1-78 (90)
140 PRK08170 acetyl-CoA acetyltran 94.9 0.1 2.2E-06 52.9 8.2 70 288-359 310-397 (426)
141 PRK06816 3-oxoacyl-(acyl carri 93.6 0.34 7.3E-06 48.2 8.8 91 107-201 268-366 (378)
142 PTZ00455 3-ketoacyl-CoA thiola 93.2 0.6 1.3E-05 47.4 9.9 71 288-360 312-401 (438)
143 PRK09258 3-oxoacyl-(acyl carri 93.1 0.29 6.3E-06 47.7 7.3 85 108-199 236-326 (338)
144 TIGR00747 fabH 3-oxoacyl-(acyl 92.6 0.31 6.7E-06 47.0 6.7 82 109-198 217-305 (318)
145 TIGR00748 HMG_CoA_syn_Arc hydr 92.6 0.41 8.9E-06 47.0 7.6 82 110-197 207-293 (345)
146 PRK07204 3-oxoacyl-(acyl carri 92.1 0.63 1.4E-05 45.2 8.2 83 108-197 227-315 (329)
147 PRK05963 3-oxoacyl-(acyl carri 92.1 0.4 8.8E-06 46.5 6.9 83 109-198 225-313 (326)
148 PRK09268 acetyl-CoA acetyltran 92.0 0.97 2.1E-05 45.8 9.6 97 289-393 313-426 (427)
149 PRK12879 3-oxoacyl-(acyl carri 91.0 0.96 2.1E-05 43.7 8.2 82 110-198 224-311 (325)
150 PRK06840 hypothetical protein; 90.4 0.95 2.1E-05 44.1 7.6 82 110-198 236-322 (339)
151 PF02801 Ketoacyl-synt_C: Beta 90.4 0.23 5E-06 40.7 2.7 74 285-360 25-106 (119)
152 CHL00203 fabH 3-oxoacyl-acyl-c 90.1 1.1 2.5E-05 43.3 7.8 80 111-198 226-312 (326)
153 cd00830 KAS_III Ketoacyl-acyl 90.0 1.1 2.5E-05 43.0 7.6 82 109-198 221-309 (320)
154 PRK06147 3-oxoacyl-(acyl carri 89.6 0.79 1.7E-05 45.1 6.3 89 112-200 235-331 (348)
155 PRK07515 3-oxoacyl-(acyl carri 89.5 1.2 2.5E-05 44.2 7.5 86 107-198 267-358 (372)
156 cd00825 decarbox_cond_enzymes 89.3 1.6 3.5E-05 42.1 8.2 77 111-188 205-286 (332)
157 PLN02326 3-oxoacyl-[acyl-carri 88.9 1.8 4E-05 43.0 8.4 83 109-198 278-366 (379)
158 PRK09352 3-oxoacyl-(acyl carri 88.8 1.7 3.7E-05 41.8 7.9 82 109-198 217-305 (319)
159 cd00327 cond_enzymes Condensin 88.2 2.2 4.7E-05 39.4 8.0 87 110-197 144-242 (254)
160 PRK06025 acetyl-CoA acetyltran 87.8 1.3 2.8E-05 44.6 6.5 73 114-194 318-399 (417)
161 PF08392 FAE1_CUT1_RppA: FAE1/ 87.8 2.4 5.2E-05 40.3 7.8 85 283-381 83-172 (290)
162 COG0332 FabH 3-oxoacyl-[acyl-c 86.5 1.8 3.8E-05 42.0 6.3 85 105-197 217-308 (323)
163 PF00195 Chal_sti_synt_N: Chal 86.1 1.9 4.2E-05 39.5 6.1 88 281-382 98-190 (226)
164 PRK04262 hypothetical protein; 85.9 2.2 4.8E-05 41.8 6.9 81 111-197 209-294 (347)
165 PF02801 Ketoacyl-synt_C: Beta 82.6 0.8 1.7E-05 37.4 1.8 77 112-188 26-110 (119)
166 cd00831 CHS_like Chalcone and 82.4 4.2 9.1E-05 40.0 7.2 87 108-198 256-350 (361)
167 PF02803 Thiolase_C: Thiolase, 80.7 5.9 0.00013 32.7 6.3 74 114-195 25-107 (123)
168 PRK08257 acetyl-CoA acetyltran 80.5 5.8 0.00013 41.0 7.7 81 113-197 294-382 (498)
169 PRK06690 acetyl-CoA acetyltran 80.1 5.5 0.00012 39.4 7.0 78 112-194 259-342 (361)
170 PRK12404 stage V sporulation p 78.5 17 0.00037 35.2 9.4 73 276-358 46-122 (334)
171 PLN03173 chalcone synthase; Pr 77.3 10 0.00022 37.9 8.1 86 281-380 100-190 (391)
172 PLN03170 chalcone synthase; Pr 76.9 12 0.00026 37.5 8.5 85 282-380 105-194 (401)
173 PLN03172 chalcone synthase fam 76.9 9.4 0.0002 38.2 7.7 87 281-381 100-191 (393)
174 PLN03168 chalcone synthase; Pr 76.7 10 0.00023 37.8 7.9 86 282-381 100-190 (389)
175 PLN02377 3-ketoacyl-CoA syntha 76.5 8.2 0.00018 39.9 7.2 70 282-358 171-245 (502)
176 PLN02192 3-ketoacyl-CoA syntha 76.5 9 0.0002 39.6 7.5 85 282-380 175-264 (511)
177 cd00827 init_cond_enzymes "ini 76.4 8.2 0.00018 37.0 7.0 87 107-200 219-315 (324)
178 PLN02932 3-ketoacyl-CoA syntha 76.3 8.8 0.00019 39.4 7.3 70 283-359 148-222 (478)
179 PRK12880 3-oxoacyl-(acyl carri 76.2 11 0.00024 37.1 7.9 81 109-197 240-324 (353)
180 PRK07314 3-oxoacyl-(acyl carri 74.7 4.6 0.0001 40.4 4.9 76 113-188 278-359 (411)
181 PLN00415 3-ketoacyl-CoA syntha 74.4 12 0.00025 38.3 7.5 81 286-380 137-222 (466)
182 PLN02787 3-oxoacyl-[acyl-carri 74.3 6.1 0.00013 41.3 5.7 75 113-188 407-487 (540)
183 PRK09052 acetyl-CoA acetyltran 74.1 7.3 0.00016 39.1 6.1 45 112-160 298-342 (399)
184 PRK06519 3-oxoacyl-(acyl carri 73.9 9.9 0.00021 38.1 7.0 76 112-188 281-357 (398)
185 TIGR02845 spore_V_AD stage V s 72.9 28 0.00061 33.7 9.4 45 284-329 51-98 (327)
186 PRK08242 acetyl-CoA acetyltran 72.4 12 0.00025 37.7 7.0 73 114-194 303-384 (402)
187 COG0304 FabB 3-oxoacyl-(acyl-c 71.8 8.1 0.00017 38.9 5.7 45 112-156 277-322 (412)
188 PRK07910 3-oxoacyl-(acyl carri 71.6 7.5 0.00016 39.2 5.6 46 112-157 287-333 (418)
189 PLN02854 3-ketoacyl-CoA syntha 71.2 13 0.00027 38.7 7.0 70 283-359 188-262 (521)
190 PRK08722 3-oxoacyl-(acyl carri 71.0 7.5 0.00016 39.2 5.4 45 112-156 279-324 (414)
191 PRK05952 3-oxoacyl-(acyl carri 71.0 6.4 0.00014 39.2 4.8 78 111-188 254-334 (381)
192 PRK09051 beta-ketothiolase; Pr 70.8 11 0.00024 37.7 6.5 44 113-160 294-337 (394)
193 PRK06445 acetyl-CoA acetyltran 70.2 19 0.00041 36.0 8.1 78 113-195 294-377 (394)
194 PLN03169 chalcone synthase fam 70.1 22 0.00047 35.6 8.4 87 109-198 279-375 (391)
195 KOG1394 3-oxoacyl-(acyl-carrie 70.0 3.5 7.6E-05 40.1 2.5 46 111-156 301-347 (440)
196 PRK14691 3-oxoacyl-(acyl carri 69.9 8.8 0.00019 37.6 5.4 48 110-157 205-253 (342)
197 PRK09050 beta-ketoadipyl CoA t 67.8 14 0.00031 37.0 6.6 43 113-159 299-341 (401)
198 KOG1391 Acetyl-CoA acetyltrans 67.5 11 0.00024 35.1 5.0 59 289-349 297-356 (396)
199 PRK05790 putative acyltransfer 67.1 17 0.00038 36.2 7.1 43 113-159 293-335 (393)
200 TIGR01930 AcCoA-C-Actrans acet 66.9 15 0.00032 36.7 6.4 42 113-158 288-329 (386)
201 PRK07850 acetyl-CoA acetyltran 66.6 23 0.0005 35.3 7.8 44 112-159 286-329 (387)
202 cd00834 KAS_I_II Beta-ketoacyl 66.5 11 0.00023 37.6 5.4 78 111-188 275-358 (406)
203 COG3425 PksG 3-hydroxy-3-methy 66.4 30 0.00065 34.2 8.2 84 108-197 206-296 (377)
204 PRK09116 3-oxoacyl-(acyl carri 66.1 9.2 0.0002 38.4 4.8 45 112-156 276-321 (405)
205 TIGR02430 pcaF beta-ketoadipyl 65.9 11 0.00024 37.7 5.4 43 113-159 298-340 (400)
206 PRK06333 3-oxoacyl-(acyl carri 65.9 9 0.0002 38.6 4.8 46 111-156 288-334 (424)
207 PRK07661 acetyl-CoA acetyltran 65.7 13 0.00028 37.2 5.7 78 112-194 290-373 (391)
208 cd00751 thiolase Thiolase are 64.7 31 0.00066 34.3 8.3 82 285-381 24-111 (386)
209 PRK05656 acetyl-CoA acetyltran 64.5 19 0.00041 36.0 6.7 42 114-159 294-335 (393)
210 PLN03171 chalcone synthase-lik 64.2 28 0.00062 34.8 7.9 71 282-359 107-182 (399)
211 PRK09185 3-oxoacyl-(acyl carri 63.5 17 0.00036 36.3 6.1 75 113-188 262-340 (392)
212 PRK06366 acetyl-CoA acetyltran 62.6 21 0.00046 35.6 6.7 82 284-380 27-114 (388)
213 cd00828 elong_cond_enzymes "el 62.4 15 0.00031 36.7 5.5 78 111-188 274-357 (407)
214 PRK06064 acetyl-CoA acetyltran 62.4 27 0.0006 34.7 7.4 42 113-158 260-301 (389)
215 PRK07851 acetyl-CoA acetyltran 62.2 14 0.00031 37.1 5.3 43 113-159 305-347 (406)
216 PLN02287 3-ketoacyl-CoA thiola 62.1 20 0.00044 36.6 6.5 72 113-188 333-410 (452)
217 cd00832 CLF Chain-length facto 62.0 16 0.00035 36.5 5.7 78 111-188 270-351 (399)
218 TIGR03150 fabF beta-ketoacyl-a 61.9 15 0.00033 36.5 5.6 45 113-157 277-322 (407)
219 PRK13359 beta-ketoadipyl CoA t 61.8 25 0.00054 35.3 7.0 42 113-158 298-339 (400)
220 PRK08304 stage V sporulation p 61.6 45 0.00097 32.5 8.3 80 284-382 57-139 (337)
221 TIGR01835 HMG-CoA-S_prok 3-hyd 61.1 30 0.00064 34.4 7.4 49 109-158 203-252 (379)
222 PRK06504 acetyl-CoA acetyltran 60.3 19 0.00042 35.9 5.9 45 112-160 289-333 (390)
223 TIGR01991 HscA Fe-S protein as 59.9 64 0.0014 34.2 10.0 50 108-158 290-339 (599)
224 PRK07516 acetyl-CoA acetyltran 58.7 24 0.00051 35.2 6.2 44 112-159 261-304 (389)
225 PRK05183 hscA chaperone protei 58.7 64 0.0014 34.4 9.8 49 109-158 307-355 (616)
226 PRK06501 3-oxoacyl-(acyl carri 58.6 17 0.00038 36.6 5.3 44 113-156 291-335 (425)
227 PRK09585 anmK anhydro-N-acetyl 58.4 33 0.00071 34.0 7.0 52 108-159 68-127 (365)
228 PRK06158 thiolase; Provisional 57.4 35 0.00076 34.0 7.2 79 285-379 30-110 (384)
229 COG3424 BcsA Predicted naringe 56.9 38 0.00082 32.5 6.7 91 277-381 69-165 (356)
230 PRK07937 lipid-transfer protei 56.8 51 0.0011 32.4 8.1 42 115-160 250-292 (352)
231 PRK06205 acetyl-CoA acetyltran 56.4 33 0.00071 34.4 6.8 83 284-381 27-115 (404)
232 PRK13410 molecular chaperone D 56.1 44 0.00096 36.0 8.1 51 107-158 305-355 (668)
233 COG3053 CitC Citrate lyase syn 55.8 76 0.0016 30.3 8.4 112 12-155 202-313 (352)
234 PTZ00050 3-oxoacyl-acyl carrie 55.8 23 0.00051 35.6 5.7 78 111-188 283-368 (421)
235 PRK12578 acetyl-CoA acetyltran 55.7 25 0.00053 35.0 5.8 82 286-383 24-111 (385)
236 PRK06954 acetyl-CoA acetyltran 55.5 23 0.0005 35.4 5.6 44 113-160 297-340 (397)
237 PRK06365 acetyl-CoA acetyltran 55.4 35 0.00075 34.6 6.8 82 285-382 39-127 (430)
238 PRK08235 acetyl-CoA acetyltran 55.1 35 0.00076 34.1 6.8 84 284-382 27-116 (393)
239 PTZ00186 heat shock 70 kDa pre 53.7 59 0.0013 34.9 8.5 50 109-159 332-381 (657)
240 cd00833 PKS polyketide synthas 53.4 31 0.00067 34.4 6.2 78 110-188 278-365 (421)
241 PRK07801 acetyl-CoA acetyltran 52.9 28 0.00062 34.5 5.7 43 114-160 283-325 (382)
242 PRK08256 lipid-transfer protei 51.8 37 0.00081 33.8 6.4 44 113-160 266-309 (391)
243 PRK08142 acetyl-CoA acetyltran 51.8 55 0.0012 32.7 7.5 84 284-383 26-111 (388)
244 PRK06289 acetyl-CoA acetyltran 51.5 35 0.00075 34.2 6.1 43 113-159 278-320 (403)
245 TIGR02445 fadA fatty oxidation 51.3 67 0.0015 32.0 8.1 41 113-157 282-322 (385)
246 PLN03184 chloroplast Hsp70; Pr 51.2 57 0.0012 35.2 8.0 52 107-159 342-393 (673)
247 CHL00094 dnaK heat shock prote 51.1 59 0.0013 34.6 8.1 50 108-158 306-355 (621)
248 PLN02836 3-oxoacyl-[acyl-carri 50.4 35 0.00075 34.6 6.0 25 112-136 300-324 (437)
249 smart00825 PKS_KS Beta-ketoacy 50.1 38 0.00083 33.9 6.2 47 111-157 279-326 (424)
250 COG0533 QRI7 Metal-dependent p 49.7 48 0.001 32.3 6.4 83 110-202 51-139 (342)
251 cd00829 SCP-x_thiolase Thiolas 49.4 22 0.00047 35.1 4.2 44 112-159 252-295 (375)
252 PRK08131 acetyl-CoA acetyltran 49.0 46 0.001 33.4 6.5 50 284-334 27-83 (401)
253 PRK08947 fadA 3-ketoacyl-CoA t 48.2 83 0.0018 31.3 8.2 42 113-158 284-325 (387)
254 PRK06059 lipid-transfer protei 48.1 60 0.0013 32.4 7.2 82 285-382 25-113 (399)
255 PRK13411 molecular chaperone D 47.6 67 0.0015 34.5 7.8 48 109-157 306-353 (653)
256 PF07451 SpoVAD: Stage V sporu 47.6 31 0.00066 33.1 4.6 86 114-201 206-307 (329)
257 PLN02644 acetyl-CoA C-acetyltr 47.6 47 0.001 33.2 6.3 82 284-380 26-113 (394)
258 TIGR03285 methan_mark_14 putat 47.3 37 0.0008 33.3 5.1 33 107-139 63-95 (445)
259 cd00826 nondecarbox_cond_enzym 46.4 47 0.001 33.2 6.1 43 113-159 271-313 (393)
260 PRK00290 dnaK molecular chaper 46.4 83 0.0018 33.6 8.3 51 107-158 303-353 (627)
261 PRK06633 acetyl-CoA acetyltran 45.4 42 0.00092 33.6 5.6 49 285-334 29-83 (392)
262 PRK07855 lipid-transfer protei 45.3 77 0.0017 31.6 7.4 82 285-381 26-108 (386)
263 PRK06157 acetyl-CoA acetyltran 45.0 66 0.0014 32.2 6.9 84 284-383 28-117 (398)
264 PRK08313 acetyl-CoA acetyltran 44.1 62 0.0013 32.2 6.5 83 285-383 26-115 (386)
265 TIGR02350 prok_dnaK chaperone 44.0 79 0.0017 33.4 7.7 51 107-158 301-351 (595)
266 PTZ00009 heat shock 70 kDa pro 43.7 93 0.002 33.4 8.2 44 113-157 315-358 (653)
267 PTZ00400 DnaK-type molecular c 42.7 70 0.0015 34.4 7.1 49 109-158 346-394 (663)
268 PRK08963 fadI 3-ketoacyl-CoA t 42.2 80 0.0017 32.0 7.1 49 285-334 31-85 (428)
269 PF00814 Peptidase_M22: Glycop 41.7 26 0.00057 33.0 3.3 31 109-139 29-59 (268)
270 COG4126 Hydantoin racemase [Am 41.7 2.1E+02 0.0045 26.2 8.7 61 109-188 158-218 (230)
271 PRK07108 acetyl-CoA acetyltran 40.2 92 0.002 31.1 7.1 84 284-382 28-118 (392)
272 TIGR01796 CM_mono_aroH monofun 39.6 83 0.0018 25.7 5.3 44 115-161 24-70 (117)
273 PRK14878 UGMP family protein; 39.1 65 0.0014 31.2 5.7 46 112-158 47-98 (323)
274 COG1214 Inactive homolog of me 38.6 1.2E+02 0.0026 27.6 7.0 50 109-158 37-91 (220)
275 PRK00768 nadE NAD synthetase; 37.4 3.6E+02 0.0078 25.5 10.2 31 146-178 90-120 (268)
276 TIGR03725 bact_YeaZ universal 37.1 57 0.0012 29.2 4.6 31 109-139 33-63 (202)
277 KOG2707 Predicted metalloprote 37.0 60 0.0013 31.8 4.8 45 113-158 86-136 (405)
278 PF09887 DUF2114: Uncharacteri 35.7 81 0.0018 31.1 5.5 33 107-139 65-98 (448)
279 TIGR00329 gcp_kae1 metallohydr 35.4 77 0.0017 30.4 5.5 50 109-158 48-102 (305)
280 PRK09604 UGMP family protein; 35.0 1E+02 0.0023 29.9 6.4 49 109-158 51-105 (332)
281 KOG2708 Predicted metalloprote 34.8 1.1E+02 0.0023 28.3 5.8 85 111-201 51-136 (336)
282 KOG1406 Peroxisomal 3-ketoacyl 33.8 53 0.0012 30.8 3.8 31 109-139 270-300 (408)
283 PRK06065 acetyl-CoA acetyltran 33.7 97 0.0021 31.0 6.0 83 285-383 31-120 (392)
284 COG0443 DnaK Molecular chapero 32.8 1.8E+02 0.0039 30.8 8.1 69 111-184 290-358 (579)
285 PF08218 Citrate_ly_lig: Citra 32.6 67 0.0015 28.3 4.0 89 12-132 56-144 (182)
286 PRK07103 polyketide beta-ketoa 32.2 73 0.0016 31.9 4.9 22 114-135 284-305 (410)
287 TIGR02446 FadI fatty oxidation 31.5 1.4E+02 0.003 30.3 6.7 49 284-333 32-86 (430)
288 COG0241 HisB Histidinol phosph 31.2 86 0.0019 27.7 4.6 51 283-334 68-127 (181)
289 TIGR02813 omega_3_PfaA polyket 31.1 80 0.0017 39.6 5.7 75 113-188 317-401 (2582)
290 PF03702 UPF0075: Uncharacteri 29.2 79 0.0017 31.3 4.4 67 108-174 65-142 (364)
291 PRK08439 3-oxoacyl-(acyl carri 29.1 1.3E+02 0.0027 30.2 6.0 76 111-188 274-355 (406)
292 PLN02666 5-oxoprolinase 28.8 1.5E+02 0.0033 34.5 7.1 59 98-160 456-514 (1275)
293 PF00108 Thiolase_N: Thiolase, 28.2 1E+02 0.0022 28.9 4.9 83 284-381 27-115 (264)
294 TIGR03723 bact_gcp putative gl 27.9 1.2E+02 0.0026 29.3 5.4 50 109-158 49-103 (314)
295 PRK06066 acetyl-CoA acetyltran 25.7 98 0.0021 30.9 4.5 42 114-159 259-302 (385)
296 COG4065 Uncharacterized protei 25.7 1.6E+02 0.0035 28.4 5.5 39 107-145 95-136 (480)
297 TIGR03722 arch_KAE1 universal 25.2 87 0.0019 30.3 3.9 45 113-158 49-99 (322)
298 PRK09605 bifunctional UGMP fam 24.8 1.4E+02 0.0029 31.2 5.5 48 109-158 49-102 (535)
299 PF07736 CM_1: Chorismate muta 24.8 1.2E+02 0.0026 24.8 4.0 37 275-312 10-47 (118)
300 PTZ00340 O-sialoglycoprotein e 24.2 1.6E+02 0.0035 28.9 5.6 48 110-158 50-103 (345)
301 TIGR02177 PorB_KorB 2-oxoacid: 23.5 4E+02 0.0086 25.4 7.9 19 112-130 11-29 (287)
302 PF11392 DUF2877: Protein of u 23.4 1.5E+02 0.0033 23.7 4.4 21 338-358 89-109 (110)
303 KOG1794 N-Acetylglucosamine ki 21.8 2.9E+02 0.0062 26.6 6.3 115 109-235 45-165 (336)
304 PRK00035 hemH ferrochelatase; 21.5 6E+02 0.013 24.5 9.1 93 109-202 168-274 (333)
305 cd02185 AroH Chorismate mutase 21.4 1.4E+02 0.003 24.4 3.7 49 276-325 11-63 (117)
306 PF12244 DUF3606: Protein of u 21.3 76 0.0016 22.3 1.9 35 307-346 14-48 (57)
307 PF07736 CM_1: Chorismate muta 21.1 2.6E+02 0.0056 22.9 5.2 45 114-161 23-70 (118)
308 KOG0102 Molecular chaperones m 21.1 1.6E+02 0.0034 30.7 4.8 90 103-199 323-415 (640)
309 TIGR01796 CM_mono_aroH monofun 20.7 1.4E+02 0.0031 24.3 3.6 51 276-327 11-66 (117)
310 PRK01433 hscA chaperone protei 20.6 4.5E+02 0.0098 27.9 8.4 48 108-158 288-335 (595)
311 COG0054 RibH Riboflavin syntha 20.4 1.8E+02 0.004 24.9 4.4 29 108-136 25-53 (152)
312 COG3737 Uncharacterized conser 20.4 3.5E+02 0.0077 22.2 5.7 60 109-175 52-112 (127)
No 1
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.9e-64 Score=497.20 Aligned_cols=378 Identities=66% Similarity=1.075 Sum_probs=330.8
Q ss_pred cccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410 15 TVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE 94 (402)
Q Consensus 15 ~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 94 (402)
+.++.++| ++|.|+|+++|++.++|+++.+.+.+..+.++.++++++..+|++++||++||++.+++.+..++++..++
T Consensus 9 ~~~~~~~~-~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~ 87 (393)
T PLN03172 9 KAQRAEGP-ATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYM 87 (393)
T ss_pred ccCCCCCC-eEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccC
Confidence 44566788 99999999999999999999998876665444455666678899999999999999776666666666678
Q ss_pred CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 044410 95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMG 174 (402)
Q Consensus 95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~ 174 (402)
.|++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++.+++++++||+|+
T Consensus 88 ~p~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~ 167 (393)
T PLN03172 88 APSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAG 167 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHH
Confidence 89999999999999999999999999999999999999999999999669999999999999998764468899999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee
Q 044410 175 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT 254 (402)
Q Consensus 175 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~ 254 (402)
+.||++|.+++++++.++||||++|.+|..|.++.|.+.++.++..+|||||+|+||++++. .+...+.+++.+..+.+
T Consensus 168 ~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~-~~~~~~~~~i~~~~~~~ 246 (393)
T PLN03172 168 GTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIERPLFEIVSAAQTI 246 (393)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCC-CcccCceeEEeeeccEE
Confidence 99999999999999999999999999997676665544555677899999999999998655 32223457888888888
Q ss_pred cCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccH
Q 044410 255 VPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLW 333 (402)
Q Consensus 255 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~ 333 (402)
+|.+++.+.|.+...|+.+.+.+++|+++.++++++++++|+++|++. .|| +|++||+|++|++.++++||++++++.
T Consensus 247 ~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~-~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~ 325 (393)
T PLN03172 247 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGIND-WNSIFWIAHPGGPAILDQVEIKLDLKEEKLR 325 (393)
T ss_pred ecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHHHH
Confidence 899999999999888888888899999999999999999999999996 888 999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410 334 ASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 334 ~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
.+|+++++||||+|||+|++|++++++..++|++++|++.+++++++||+|+||+++||||.
T Consensus 326 ~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 326 ATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred HHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEec
Confidence 99999999999999999999999885322337777774447899999999999999999994
No 2
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=2.4e-64 Score=499.52 Aligned_cols=377 Identities=63% Similarity=1.059 Sum_probs=328.7
Q ss_pred cccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410 15 TVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE 94 (402)
Q Consensus 15 ~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 94 (402)
+.++..+| ++|.++|+.+|++.++|+++.+.+.+..+.++.++++++..+|++++||++||++.+++.+..++++..++
T Consensus 13 ~~~~~~~~-~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~ 91 (401)
T PLN03170 13 KAQRATGP-ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYM 91 (401)
T ss_pred cCCCCCCC-eEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccC
Confidence 34455688 89999999999999999999999877664444455666678899999999999998766555566666678
Q ss_pred CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 044410 95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMG 174 (402)
Q Consensus 95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~ 174 (402)
.|++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+.+++++++||+|+
T Consensus 92 ~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~ 171 (401)
T PLN03170 92 APSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAG 171 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcChhHHH
Confidence 89999999999999999999999999999999999999999999999779999999999999998865689999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee
Q 044410 175 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT 254 (402)
Q Consensus 175 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~ 254 (402)
+.||++|.+++++++.++||||++|.+|..|++|.+.+.+++.+..+|||||+|+||++++. .++..+.+++.+..+.+
T Consensus 172 ~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~-~~~~~~~~~l~~~~~~~ 250 (401)
T PLN03170 172 GTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPD-ERVERPLFQLVSASQTI 250 (401)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCc-ccccCCceEEeeccceE
Confidence 99999999999999999999999999998675555433456677889999999999998765 32222356788777777
Q ss_pred cCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccH
Q 044410 255 VPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLW 333 (402)
Q Consensus 255 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~ 333 (402)
+|++++.+.|.+++.|+.+.+++++|..+.+.++++++++|+++|++. +|+ +|++||+|++|++.+++.||++++|+.
T Consensus 251 ~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~-~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~ 329 (401)
T PLN03170 251 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITD-YNSIFWVAHPGGPAILDQVEAKVGLEKERMR 329 (401)
T ss_pred ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEecCCcHHHHHHHHHHcCCChHHHH
Confidence 898888788888888888888999999999999999999999999997 888 999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410 334 ASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 334 ~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
.+|+++++||||+|+|+|++|++++++..++|++++|++.|++++++||+|++|+++||+|
T Consensus 330 ~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 330 ATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred HHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHhee
Confidence 8899999999999999999999998532223778887434789999999999999999999
No 3
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=1.8e-63 Score=491.80 Aligned_cols=377 Identities=49% Similarity=0.863 Sum_probs=322.4
Q ss_pred ccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCC
Q 044410 16 VKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEA 95 (402)
Q Consensus 16 ~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~ 95 (402)
.++.++| ++|.++|+.+|++.++|+++.+.+.+...+++.+.++++..+|++++||++||++.+++.+..++++..+..
T Consensus 9 ~~~~~~~-~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ 87 (389)
T PLN03168 9 QPRAEGP-ACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYME 87 (389)
T ss_pred CCCCCCC-eEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccC
Confidence 3466688 999999999999999999999998776644444556666788999999999999987766666776666688
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHH
Q 044410 96 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGG 175 (402)
Q Consensus 96 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~ 175 (402)
|++++|++.|.+.+.+|+.+|+++||+++|++++|||+||++|+|++..|+++.+|+++||+++.+.+++++++||+|++
T Consensus 88 ps~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~ 167 (389)
T PLN03168 88 PSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGA 167 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHH
Confidence 99999999999999999999999999999999999999999999997789999999999999987666899999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeec
Q 044410 176 TVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTV 255 (402)
Q Consensus 176 ~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~ 255 (402)
+||++|++++++++.++||||++|.+|..+.++++.+.+++.+..+|||||+|+||++++. .......+++....+.++
T Consensus 168 ~aL~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~-~~~~~~~~~~~~~~~~~~ 246 (389)
T PLN03168 168 SVLRVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPK-PEVEKALFEVHWAGETIL 246 (389)
T ss_pred HHHHHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCC-CccCCcceEEEeeeeEEE
Confidence 9999999999999999999999999998675443333455678899999999999998654 221223567776666788
Q ss_pred CCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHH
Q 044410 256 PDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWA 334 (402)
Q Consensus 256 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~ 334 (402)
|++++.+.|.+...|+.+.+.+++++.+.++++.+++++|+..|+.. .++ +|++||+|++|++.++++||+++||+..
T Consensus 247 p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~-~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~ 325 (389)
T PLN03168 247 PESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPD-WNEMFWAVHPGGPAILDQVEAKLKLTKDKMQG 325 (389)
T ss_pred cCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHHHHH
Confidence 98888888988888887877889999999999999999999999875 555 9999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410 335 SRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 335 ~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
+|+++++||||+|||+|+.|++++++.+++|....|.++|++++++||+|++|++++|||.
T Consensus 326 s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~ 386 (389)
T PLN03168 326 SRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAA 386 (389)
T ss_pred HHHHHHHhCccHhhhHHHHHHHHHHHHhhcCCCCCCCCccEEEEEEEcchhhhhhhhheec
Confidence 9999999999999999999999876422212100011238999999999999999999993
No 4
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=2e-63 Score=490.97 Aligned_cols=378 Identities=65% Similarity=1.046 Sum_probs=327.8
Q ss_pred cccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410 15 TVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE 94 (402)
Q Consensus 15 ~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 94 (402)
+.++.++| ++|.++|+.+|++.++|+++.+.+.+...+++...++++..+|++++||++||++.+++.+..+|.+..++
T Consensus 9 ~~~~~~~~-~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~ 87 (391)
T PLN03173 9 KAQRAEGP-ATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYM 87 (391)
T ss_pred cCCCCCCC-eEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCccccccc
Confidence 34466688 99999999999999999999999876664333344555678899999999999999776555566666677
Q ss_pred CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 044410 95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMG 174 (402)
Q Consensus 95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~ 174 (402)
.|++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++.+++++++||+|+
T Consensus 88 ~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~ 167 (391)
T PLN03173 88 APSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAG 167 (391)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHH
Confidence 89999999999999999999999999999999999999999999999668999999999999998765578899999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee
Q 044410 175 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT 254 (402)
Q Consensus 175 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~ 254 (402)
+.||++|++++++++.++||||++|.+|..|+++.|.+.++..+..+|||||+|+||+.++. .++..+.+++.+..+..
T Consensus 168 ~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~-~~~~~~~~~l~~~~~~~ 246 (391)
T PLN03173 168 GTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPV-LGVEKPLFELVSAAQTI 246 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCC-CCcCCcceEEEeeeeEE
Confidence 99999999999999999999999999996676665544455567899999999999998654 33223457888888888
Q ss_pred cCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccH
Q 044410 255 VPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLW 333 (402)
Q Consensus 255 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~ 333 (402)
+|.+++.+.|.++..|+.+.+.+++|+.+.+.++++++++|+++|++. +|| +|++||+|++|++.++++||++++|+.
T Consensus 247 ~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~-~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~ 325 (391)
T PLN03173 247 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISD-WNSLFWIAHPGGPAILDQVEAKLALKPEKLR 325 (391)
T ss_pred ecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEECCCcHHHHHHHHHHcCCChHHHH
Confidence 999998889998888888888899999999999999999999999997 888 999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410 334 ASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 334 ~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
.+|+++++||||+|||+|++|++++++..+++.+++|++++++++++||+|+|+++++|+|.
T Consensus 326 ~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~ 387 (391)
T PLN03173 326 ATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLHSV 387 (391)
T ss_pred HHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHhhc
Confidence 99999999999999999999999996422124444553348899999999999999999994
No 5
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.6e-61 Score=479.00 Aligned_cols=368 Identities=40% Similarity=0.703 Sum_probs=311.0
Q ss_pred cCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCC
Q 044410 17 KSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAP 96 (402)
Q Consensus 17 ~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~ 96 (402)
..+.++ ++|.|+|+++|++.++|+++.+.+....... .+.++++.++|++++||++||++.+++....+|.+.....|
T Consensus 16 ~~~~~~-~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~ 93 (391)
T PLN03169 16 AANPGK-ATILALGKAFPSQLVPQEYLVDGYFRDTKCD-DPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTP 93 (391)
T ss_pred cCCCCC-eEEEEEEeeCCCeecCHHHHHHHHHHHhccc-CHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCC
Confidence 344566 8999999999999999999998655422111 23455567889999999999999754444445655555679
Q ss_pred ChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHH
Q 044410 97 SLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGT 176 (402)
Q Consensus 97 ~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~ 176 (402)
++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++.+..|+++.+|+++||+++.+.+++++++||+|+++
T Consensus 94 ~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~ 173 (391)
T PLN03169 94 TIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVA 173 (391)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHH
Confidence 99999999999999999999999999999999999999999986688999999999999998876447999999999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecC
Q 044410 177 VIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVP 256 (402)
Q Consensus 177 al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p 256 (402)
||++|.+++++++.++||||++|.+|..+..+.+....++.+..+|||||+|+||+.++. .......+.+...++..+|
T Consensus 174 aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~-~~~~~~~~~l~~~~~~~ip 252 (391)
T PLN03169 174 GLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPI-PVSESPFFELHTAIQQFLP 252 (391)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCC-cccCCcceEEEeeeeeEcC
Confidence 999999999999999999999999987554332222345678899999999999998664 2101234667666667788
Q ss_pred CCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCC--CcceEEEEcCCCHHHHHHHHHHcCCCccccHH
Q 044410 257 DTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISD--WNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWA 334 (402)
Q Consensus 257 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~--~~di~~i~H~~~~~~~~~~~~~lgi~~ek~~~ 334 (402)
.+.+.+.|.+...|+.+.+++++|+++.+.++++++++|+++|+++ .++++|++||+|++|++.++++||++++|+..
T Consensus 253 ~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~ 332 (391)
T PLN03169 253 GTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLEC 332 (391)
T ss_pred CCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHH
Confidence 8777677777778888888999999999999999999999999984 13448899999999999999999999999998
Q ss_pred HHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc---CCCCCceEEEEEEcccccceeeEEee
Q 044410 335 SRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT---TGEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 335 ~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~---~G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
+|+++++||||+|||+|++|++++++ ++++ +| |++++++||+|++|++++|||
T Consensus 333 s~~~l~~~GNtsSasip~~L~~~~~~----~~~~~~~~g---d~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 333 SRRALMDYGNVSSNTIVYVLEYMREE----LKKKGEEDE---EWGLILAFGPGITFEGILARN 388 (391)
T ss_pred HHHHHHHhCCchHhHHHHHHHHHHHh----hcccCCCCC---cEEEEEEEcccHhHHHHHHhh
Confidence 88899999999999999999999887 6665 56 999999999999999999998
No 6
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=2.8e-62 Score=464.29 Aligned_cols=313 Identities=23% Similarity=0.286 Sum_probs=268.9
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.|+|.|+|+++++|+++++.+ ..++ +||..++||++||++.++|.
T Consensus 4 a~i~g~G~~lP~~~vtn~d~e~~~---~tsd---------ewI~~rtGir~R~~a~~~e~-------------------- 51 (323)
T COG0332 4 AKILGIGSYLPERVVTNADLEKRV---DTSD---------EWIETRTGIRERRIAADDET-------------------- 51 (323)
T ss_pred ceEEEEEeecCCcccChHHHHhcc---CCCc---------ceeeeecCCceeeecCCCcc--------------------
Confidence 689999999999999999998653 4443 89999999999999988763
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
.++|+++|+++||+++|++|+|||+||++|++| +.+|++|+.||++||+.... +||++.+|+|+++||.+|.
T Consensus 52 -----~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~--afDl~aaCsgf~yaL~~A~ 124 (323)
T COG0332 52 -----TSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP--AFDLQAACSGFLYALSVAD 124 (323)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcc--eeechhhhHHHHHHHHHHH
Confidence 899999999999999999999999999999999 78899999999999999865 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee----ecCCC
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT----TVPDT 258 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~----~~p~~ 258 (402)
.+|++|.+++||||++|++|+ +.+++ ++.+.++|||||+|+||++.+...++. .+.+.+++.. ..|.+
T Consensus 125 ~~i~sG~~k~vLVVg~e~~S~-~ld~~-----dR~t~vlFgDGAgAvvl~~~~~~~~i~--~~~l~sdg~~~~~l~~~~~ 196 (323)
T COG0332 125 GLIRSGGYKNVLVVGAETLSR-ILDWT-----DRDTCVLFGDGAGAVVLEATEDDNGIL--DTDLGSDGSQGDLLYLPGG 196 (323)
T ss_pred HHHHcCCCCEEEEEehhHhhc-cCCHh-----hccceEEEcCCceEEEEecCCCCcCee--eeeeeccccCCCeeeccCC
Confidence 999999999999999999997 44543 456899999999999999987313321 2344443332 12222
Q ss_pred cccccceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHH
Q 044410 259 ENYISGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASR 336 (402)
Q Consensus 259 ~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~ 336 (402)
..... ........+.| |+++|+++++.++++++++|+++++++ +|| +|+|||+|.+|++.++++||+|++|+..+
T Consensus 197 ~~~~~-~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~-~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~- 273 (323)
T COG0332 197 GSATP-KEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTP-EDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVT- 273 (323)
T ss_pred CCccc-cccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEccccccHHHHHHHHHHcCCCHHHHhhH-
Confidence 11110 00011123344 999999999999999999999999998 999 99999999999999999999999999986
Q ss_pred HHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410 337 YVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 337 ~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
+++||||++||+|++|++++++ |++++| |+++|++||+|++||++++||.
T Consensus 274 --~~~yGNtsaAsiplaL~~~~~~----g~ik~G---d~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 274 --VDKYGNTSAASIPLALDEALRE----GRIKPG---DLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred --HHHhcccccchHHHHHHHHhhh----CCCCCC---CEEEEEeecCcceeeeEEEEeC
Confidence 9999999999999999999998 999999 9999999999999999999984
No 7
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=5.6e-60 Score=468.83 Aligned_cols=375 Identities=48% Similarity=0.839 Sum_probs=308.9
Q ss_pred cccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410 15 TVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE 94 (402)
Q Consensus 15 ~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 94 (402)
..++.++| ++|.|+|+|+|+++++|+++.+.+.+....+..++++++.+||++++||++||++.+++.+..+|.+....
T Consensus 15 ~~~~~~~~-~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~ 93 (399)
T PLN03171 15 RAQRADGL-AAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHD 93 (399)
T ss_pred cccCCCCC-cEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccC
Confidence 34455677 99999999999999999999988644322333344555678999999999999998765555566666667
Q ss_pred CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 044410 95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMG 174 (402)
Q Consensus 95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~ 174 (402)
.|++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+.+++++.+||+|+
T Consensus 94 ~~~~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~ 173 (399)
T PLN03171 94 APSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAG 173 (399)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHH
Confidence 89999999999999999999999999999999999999999999999558999999999999987653356778899999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccc-hhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee
Q 044410 175 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETH-LDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT 253 (402)
Q Consensus 175 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~-~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~ 253 (402)
++||++|.+++++++.++||||++|.+|..+ ++.+++ .++.+...+|||||+|+||++.++ .. ....+++......
T Consensus 174 ~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~-~~-~~~~~~l~~~~~~ 250 (399)
T PLN03171 174 AAALRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADAD-AA-ERPLFEIVSAAQA 250 (399)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCC-CC-CCCceEEEEeeeE
Confidence 9999999999999999999999999999755 343322 233445689999999999998664 21 1124677766666
Q ss_pred ecCCCcccccceeecCceEEEeC-CchhHHHHHhHHHHHHHhhcc-----CCCCCCcceEEEEcCCCHHHHHHHHHHcCC
Q 044410 254 TVPDTENYISGQLKEMGTYCHLS-RDVPVAIGNYVDKCLSNAMSP-----IGISDWNSLFYVVHPGGDGLLDQVEKTLGL 327 (402)
Q Consensus 254 ~~p~~~~~~~~~~~~~g~~~~~~-~~v~~~~~~~~~~~i~~~L~~-----~gl~~~~di~~i~H~~~~~~~~~~~~~lgi 327 (402)
.+|.+.+.+.|.....++.+.++ +.+++.+.+.+.++++++|.+ .|++. +|+.|++||+|++|++.++++||+
T Consensus 251 ~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~-~di~~~~Hq~~~~il~~v~~~Lgl 329 (399)
T PLN03171 251 IIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEW-NDLFWAVHPGSSAILDQVDAALGL 329 (399)
T ss_pred EecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCc-ccceEEEcCCcHHHHHHHHHHcCC
Confidence 78888777777766666666665 788887777777777766553 57776 888566799999999999999999
Q ss_pred CccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc--ccCCCCCceEEEEEEcccccceeeEEeeeccC
Q 044410 328 RKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK--ATTGEGLECGVLFGFGPGLTVETVVLQSVSTN 398 (402)
Q Consensus 328 ~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~--i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~ 398 (402)
+++|+..+|.++++||||+|||+|++|++++++ ++ +++|.+.|++++++||+|++|++++|+|.+.|
T Consensus 330 ~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~----~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~~~ 398 (399)
T PLN03171 330 EPEKLAASRRVLSDYGNMFGATVIFALDELRRQ----MEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASGHP 398 (399)
T ss_pred CHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhh----HhhcCCCCCCcceEEEEEEcccHHHHHHHhhcccCC
Confidence 999999888899999999999999999999876 53 45553238999999999999999999999988
No 8
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=8.5e-56 Score=436.23 Aligned_cols=354 Identities=41% Similarity=0.668 Sum_probs=296.5
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccc--hhHhhhCCCCccCCCCChHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLT--EEILKENPNMCCYEAPSLDAR 101 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~--~~~~~~~~~~~~~~~~~~~~~ 101 (402)
++|.|+|+++|+++++|+++.+.+.........+..+++.+||.+++||++||++.+ ++... + .....|.+++|
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~--~--~~~~~~~~~~~ 77 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYA--P--RPEMSPSLDER 77 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcC--C--ccccCCCcCcc
Confidence 689999999999999999999886432211001234455689999999999999987 33210 0 00134778999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccchHHHHHHH
Q 044410 102 QAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT-QGCYMGGTVIRL 180 (402)
Q Consensus 102 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~C~~~~~al~~ 180 (402)
+..+.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+++.+|+++||+++... +++++ ++|+|++.||++
T Consensus 78 ~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~-~~dv~~~~C~~~~~al~~ 156 (361)
T cd00831 78 NDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVK-RYNLGGMGCSAGAIALDL 156 (361)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccc-hhccccccchhHHHHHHH
Confidence 9999999999999999999999999999999999999988889999999999999986443 78998 899999999999
Q ss_pred HHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcc
Q 044410 181 AKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTEN 260 (402)
Q Consensus 181 A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 260 (402)
|.+++++++.++||||++|.+|..+ ++.+ +++.....++|||||+|+||++++.........+++.+.....+|.+.+
T Consensus 157 A~~~~~~~~~~~aLvv~~e~~s~~~-~~~d-~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 234 (361)
T cd00831 157 AKDLLEANPGARVLVVSTELCSLWY-RGPD-HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSED 234 (361)
T ss_pred HHHHHHHCCCCEEEEEEeeccccee-CCCC-cHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCC
Confidence 9999999999999999999999744 4433 1344446789999999999998765211112345666555566787766
Q ss_pred cccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccC--CCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 044410 261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI--GISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRY 337 (402)
Q Consensus 261 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~--gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~ 337 (402)
.+.|.+...++.+.++++++..+...++++++++|+++ |++. +|| +|++||+|+++++.+++.||++++|+..+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~-~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~ 313 (361)
T cd00831 235 AMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFK-LAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRM 313 (361)
T ss_pred ceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCcc-ccceEEEECCCChHHHHHHHHHcCCCHHHHHHHHH
Confidence 66676666677778888999999999999999999999 9997 999 9999999999999999999999999987777
Q ss_pred HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEE
Q 044410 338 VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL 392 (402)
Q Consensus 338 ~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll 392 (402)
++++||||+|||+|++|++++++ |++++| |+|++++||+|++|+++||
T Consensus 314 ~l~~~GN~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 314 VLRRYGNMSSSSVLYVLAYMEAK----GRVKRG---DRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHHHhCCchhccHHHHHHHHHHh----CCCCCC---CEEEEEEEcCCceeeeeeC
Confidence 89999999999999999999998 889999 9999999999999999885
No 9
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.4e-54 Score=392.12 Aligned_cols=352 Identities=29% Similarity=0.503 Sum_probs=311.6
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHH-HcCcceeecccchhHhhhCCCCccCCCCChHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICE-RQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQ 102 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (402)
..|.|+++++|++.+.|.|+.+.+......+ + .+...+.+. +.+|++|+++.|.+..+ .-+++.+||
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~---~-~~~I~r~l~~~~~i~~R~~v~Pl~~y~--------e~~~f~ekN 69 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQE---G-REDIPRVLHANAQINRRHLVLPLDWYR--------EPHGFGEKN 69 (356)
T ss_pred ceeeecccCCCccccchHHHHHHHHHhcccc---c-hHHHHHHHhhccccccceecccHhhcc--------CCCChhhhh
Confidence 4799999999999999999888875433222 2 233445554 78999999999987522 235789999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 103 AMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 103 ~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+.|.+.+..|.++|.++||+.+++.++|||+|+++|+|+...|++..+|..+||+++.+.|......||+++..+|..|.
T Consensus 70 ~ifie~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~ 149 (356)
T COG3424 70 EIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARAR 149 (356)
T ss_pred hhHHHHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888889999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI 262 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 262 (402)
.++++.|..+||||+.|.||.++. ..++..++.+...+||||++|+|++.+....+.......+.+..+.++|++++.|
T Consensus 150 ~y~ra~P~~~vlvV~vELCSLt~~-~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~M 228 (356)
T COG3424 150 DYCRAAPDANVLVVCVELCSLTYV-FADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIM 228 (356)
T ss_pred HHHhhCccceEEEEEeeeeeeeee-cCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCcccccc
Confidence 999999999999999999998765 3333345788899999999999999865422223335667777788899999999
Q ss_pred cceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHh
Q 044410 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLRE 341 (402)
Q Consensus 263 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~ 341 (402)
.|.+.+.|+.+.++++++..+...+...+..+|..++++. +|| .|+.|+++++++++..+.||+++|+...+|+.+++
T Consensus 229 gwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~-~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~~ 307 (356)
T COG3424 229 GWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSI-EDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLRE 307 (356)
T ss_pred ceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCch-hhhceeeeCCCCchHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997 999 99999999999999999999999999999999999
Q ss_pred cCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410 342 YGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST 397 (402)
Q Consensus 342 ~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~ 397 (402)
|||++||++++.|.+.+++ + .++| +++++.++|+||+...+|++|.+.
T Consensus 308 ~GNMSSatvLfVL~d~l~~----~-~~~g---~~Gl~~A~GPGf~sElvL~~w~~~ 355 (356)
T COG3424 308 YGNMSSATVLFVLEDTLQK----A-PKSG---SRGLMFAMGPGFCSELVLLDWEGG 355 (356)
T ss_pred hCCccchhhHHHHHHHHHh----c-CCCC---cceeeeecCCcceeeeeeEEeecc
Confidence 9999999999999999996 4 6778 899999999999999999999864
No 10
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.5e-53 Score=412.32 Aligned_cols=317 Identities=21% Similarity=0.259 Sum_probs=258.1
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.|+|+|+|+++++|+++.+... ..+ ....+++.+++||++||++.+++
T Consensus 8 ~~I~~~g~~lP~~~v~~~~~~~~~~---~~~-----~~~~~~i~~~~Gi~~R~~~~~~e--------------------- 58 (353)
T PRK12880 8 AKISGICVSVPEHKICIDDELESVF---SND-----IKTLKRMKKVIGLNTRYICDENT--------------------- 58 (353)
T ss_pred cEEEEEEEECCCeEecHHHHHHHhc---Ccc-----hhhhhhhhhccCceEEEeCCCCC---------------------
Confidence 7999999999999999997654431 111 01245788899999999997665
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
++.+|+++|+++||+++|++++|||+||++|++| +..|+++.+|+++||+++.+. +++++++|+|+++||++|.
T Consensus 59 ----~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~-~~di~~~C~g~~~aL~~A~ 133 (353)
T PRK12880 59 ----CVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTI-AFDLGQACAGYLYGLFVAH 133 (353)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCce-EEehhhhhHHHHHHHHHHH
Confidence 3899999999999999999999999999999998 899999999999999986543 7999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT 258 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~ 258 (402)
+++++|+.+ ||||++|.+|..+ +|++ +....+|||||+|+||++.+. .. ..+.+...+. ..+|.+
T Consensus 134 ~~i~~~~~~-~LVv~~e~~S~~~-~~~d-----~~~~~lFGDGAaA~vl~~~~~-~~---~~~~~~~~~~~~~~~~~p~g 202 (353)
T PRK12880 134 SLIQSGLGK-ILLICGDTLSKFI-HPKN-----MNLAPIFGDGVSATLIEKTDF-NE---AFFELGSDGKYFDKLIIPKG 202 (353)
T ss_pred HHHHcCCCC-EEEEEehhhhccC-Cccc-----CCceeeecccceEEEEEecCC-CC---ceEEEEecCCCCCeEEecCC
Confidence 999999888 9999999999744 4543 235789999999999997654 21 1244444433 344544
Q ss_pred cccc-cceeec-----------CceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHH
Q 044410 259 ENYI-SGQLKE-----------MGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKT 324 (402)
Q Consensus 259 ~~~~-~~~~~~-----------~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~ 324 (402)
.... .|.... ....+.+ ++.+|+++.+.++++++++|+++|++. +|| +|++||+|+++++.++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~HQ~~~~i~~~i~~~ 281 (353)
T PRK12880 203 AMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDE-KDIAFHLFHQSNAYLVDCIKEE 281 (353)
T ss_pred CcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHH
Confidence 3211 111100 0112334 799999999999999999999999997 999 999999999999999999
Q ss_pred cCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCc
Q 044410 325 LGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF 399 (402)
Q Consensus 325 lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~ 399 (402)
||++++|++.. ++++|||++|||+|++|++++++ |+ -++++++||+|++||+++|||.++=|
T Consensus 282 Lgl~~ek~~~~--~l~~~GNtssasip~~L~~~~~~----~~-------~~~ll~~~G~G~s~g~~ll~~~~~~~ 343 (353)
T PRK12880 282 LKLNDDKVPNF--IMEKYANLSACSLPALLCELDTP----KE-------FKASLSAFGAGLSWGSAVLNFKDLYT 343 (353)
T ss_pred hCCCHHHhhhh--hHHhhCCHHHHHHHHHHHHHHHc----CC-------cEEEEEEEchhhhheEeEEEECCcCC
Confidence 99999998743 58999999999999999999875 43 46899999999999999999976543
No 11
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2e-52 Score=406.93 Aligned_cols=312 Identities=20% Similarity=0.214 Sum_probs=257.2
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|+|+|+++++|+++.+.++ .. .+++.+++||++||++.+++
T Consensus 4 ~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~e--------------------- 50 (326)
T PRK05963 4 SRIAGFGHAVPDRRVENAEIEAQLG---LE---------TGWIERRTGIRCRRWAAPDE--------------------- 50 (326)
T ss_pred cEEEEEEEECCCCeecHHHHHHHcC---CC---------HHHhhhccCCeEEEEcCCCC---------------------
Confidence 7999999999999999999988752 11 36889999999999997765
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
++.+|+++|+++||+++|++++|||+||++|++| +.+|+.+.+|+++||+++.. +++++++|+|+++||++|.
T Consensus 51 ----~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~~--~~di~~~C~g~~~aL~~A~ 124 (326)
T PRK05963 51 ----TLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSG--AIDLAGACAGFLYALVLAD 124 (326)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCCc--eeeccchhhHHHHHHHHHH
Confidence 3899999999999999999999999999999999 79999999999999998764 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeee----eecCC
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQ----TTVPD 257 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~----~~~p~ 257 (402)
++++++ .++||||++|+.+..+ ++.+ +.+..+|||||+|+||++++... ++. ...+.+.+. ..+|.
T Consensus 125 ~~l~~~-~~~aLVv~~d~~s~~~-~~~~-----~~~~~lfGDgA~A~ll~~~~~~~~~~l--~~~~~t~~~~~~~~~~~~ 195 (326)
T PRK05963 125 GFVRAQ-GKPVLVVAANILSRRI-NMAE-----RASAVLFADAAGAVVLAPSAKANSGVL--GSQLISDGSHYDLIKIPA 195 (326)
T ss_pred HHHHcC-CCeEEEEEechhhccC-Cccc-----cCceEEEeecceEEEEEecCCCCCceE--EEEEEEcCCCCCeEEeCC
Confidence 999987 5999999999988633 4432 33578999999999999866411 111 112222211 12232
Q ss_pred Ccccccce--eecCceEEE--eCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcccc
Q 044410 258 TENYISGQ--LKEMGTYCH--LSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKL 332 (402)
Q Consensus 258 ~~~~~~~~--~~~~g~~~~--~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~ 332 (402)
......+. .......+. .++.+|+.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+.+.||++++|+
T Consensus 196 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~~l~l~~~k~ 274 (326)
T PRK05963 196 GGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTP-QDIDRFFPHQANARIVDKVCETIGIPRAKA 274 (326)
T ss_pred CCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCCHHHh
Confidence 21111111 011111222 3678898889999999999999999997 999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410 333 WASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 333 ~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
.. ++++|||+++||+|++|++++++ +++++| |+|++++||+|++|+++||||
T Consensus 275 ~~---~l~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 275 AS---TLETYGNSSAATIPLSLSLANLE----QPLREG---ERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred hh---hHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEehhhhheeeEEeC
Confidence 76 49999999999999999999987 889999 999999999999999999997
No 12
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=6.9e-52 Score=410.15 Aligned_cols=319 Identities=21% Similarity=0.275 Sum_probs=258.5
Q ss_pred CCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCC
Q 044410 18 SNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPS 97 (402)
Q Consensus 18 ~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 97 (402)
+.+.. ++|.|+|+|+|+++++|+++.+.++ .. .+||.+++||++||++.+++
T Consensus 43 ~~~~~-~~I~g~g~~lP~~~v~n~el~~~~~---~~---------~~~i~~~tGi~~R~~~~~~~--------------- 94 (379)
T PLN02326 43 RVGSG-SKLVGCGSAVPKLLITNDDLSKLVD---TS---------DEWIATRTGIRNRRVLSGDE--------------- 94 (379)
T ss_pred cccCC-cEEEEEEEECCCceecHHHHHHhcC---Cc---------hhheecccCcceEeecCCCC---------------
Confidence 33444 8999999999999999999988652 11 36789999999999987765
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHH
Q 044410 98 LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTV 177 (402)
Q Consensus 98 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~a 177 (402)
+..+|+.+|+++||+++|++++|||+||++++++...+..+..|+++||+++.. +++++++|+|++.|
T Consensus 95 ----------~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~~~--~~dv~~~Ca~~~~a 162 (379)
T PLN02326 95 ----------TLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTNAL--AFDLTAACSGFVLG 162 (379)
T ss_pred ----------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCCCCc--eeeccccchHHHHH
Confidence 389999999999999999999999999999988844456789999999998654 79999999999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee--e--
Q 044410 178 IRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ--T-- 253 (402)
Q Consensus 178 l~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~--~-- 253 (402)
|++|.++|++|..++||||++|.++. +.++.+ +....+|||||+|+||++++. ....-..+.+.+.+. .
T Consensus 163 L~~A~~~l~~g~~~~vLVv~~e~~s~-~~~~~d-----~~~~~lfGDGAaAvlL~~~~~-~~~~i~~~~~~t~g~~~~~~ 235 (379)
T PLN02326 163 LVTAARFIRGGGYKNVLVIGADALSR-YVDWTD-----RGTCILFGDGAGAVVLQACDD-DEDGLLGFDMHSDGNGHKHL 235 (379)
T ss_pred HHHHHHHHHcCCCCEEEEEEechhcC-CCCccc-----cCceEEEcceeEEEEEEEcCC-CCCceEEEEEEEcCCCCCeE
Confidence 99999999999999999999999986 434432 234579999999999998764 210001123332211 0
Q ss_pred ec--CCCc---------ccccceeecCce-EEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHH
Q 044410 254 TV--PDTE---------NYISGQLKEMGT-YCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD 319 (402)
Q Consensus 254 ~~--p~~~---------~~~~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~ 319 (402)
.. +... +...+.....++ .+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|+++++
T Consensus 236 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~ 314 (379)
T PLN02326 236 HATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTA-ESIDWLLLHQANQRIID 314 (379)
T ss_pred EecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHH
Confidence 11 1110 000111111122 2344 788999999999999999999999997 999 9999999999999
Q ss_pred HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 320 ~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
.+++.||++++|+..+ +++||||+|||+|++|++++++ |++++| |+||+++||+|++|+++||+|
T Consensus 315 ~~~~~Lgl~~ek~~~~---l~~~GNt~sAsi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 315 AVAQRLGIPPEKVISN---LANYGNTSAASIPLALDEAVRS----GKVKKG---DVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHHHHcCCCHHHeeec---HhhcCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEChhheeeEEEEEC
Confidence 9999999999999765 8999999999999999999988 889999 999999999999999999997
No 13
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.2e-51 Score=398.97 Aligned_cols=314 Identities=20% Similarity=0.236 Sum_probs=256.1
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|+|+|+++++|+++.+.++ .. .+|+.+++||++||++. ++
T Consensus 5 ~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~R~~~~-~~--------------------- 50 (329)
T PRK07204 5 ISIKGIGTYLPKRKVDSLELDKKLD---LP---------EGWVLKKSGVKTRHFVD-GE--------------------- 50 (329)
T ss_pred cEEEEEEEeCCCceecHHHHHHhhC---CC---------HhHhhhccCceEEeecC-CC---------------------
Confidence 7999999999999999999987642 11 26889999999999986 44
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+..+|+.+|+++||+++|++++|||+||++++++ +..|+.+.+|+++||+++...++++++++|+|++.||.+|.
T Consensus 51 ----~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~ 126 (329)
T PRK07204 51 ----TSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTIS 126 (329)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHH
Confidence 3889999999999999999999999999999888 67899999999999998631238999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT 258 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~ 258 (402)
+++++|..++||||++|.++..+ ++.+ ....++|||||+|+||++++...++.. ..+...+. ..+|..
T Consensus 127 ~~l~~g~~~~~Lvv~~e~~s~~~-~~~~-----~~~~~lfGDGAaA~ll~~~~~~~~il~--~~~~t~~~~~~~~~~~~~ 198 (329)
T PRK07204 127 YAIECGRYKRVLIISSEISSVGL-NWGQ-----NESCILFGDGAAAVVITKGDHSSRILA--SHMETYSSGAHLSEIRGG 198 (329)
T ss_pred HHHHCCCCCEEEEEEeccccCCC-Cccc-----CcceEEEecccEEEEEEEcCCCCcEEE--EEEEEecCCCCceEEecC
Confidence 99999999999999999988633 3321 224689999999999998765121110 11111110 011211
Q ss_pred cccc----cceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcccc
Q 044410 259 ENYI----SGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKL 332 (402)
Q Consensus 259 ~~~~----~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~ 332 (402)
...+ .+.....++.+.+ ++++++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.|++|++|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~H~~~~~~~~~i~~~l~l~~e~~ 277 (329)
T PRK07204 199 GTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTL-ADIDLIVPHQASGPAMRLIRKKLGVDEERF 277 (329)
T ss_pred CcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCCHHHh
Confidence 1000 1111222334444 688999999999999999999999997 999 99999999999999999999999998
Q ss_pred HHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410 333 WASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 333 ~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
.. ++++|||++|||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 278 ~~---~~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 278 VT---IFEDHGNMIAASIPVALFEAIKQ----KKVQRG---NKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred hh---hHhhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheeeEEeC
Confidence 75 59999999999999999999998 889999 999999999999999999986
No 14
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=8.8e-51 Score=395.19 Aligned_cols=313 Identities=25% Similarity=0.304 Sum_probs=254.3
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.|+|+|+|+++++|+|+++.++ .. ..+|.+++||++||++.+++
T Consensus 3 v~I~~~g~~lP~~~v~~~e~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~--------------------- 49 (326)
T CHL00203 3 VHILSTGSSVPNFSVENQQFEDIIE---TS---------DHWISTRTGIKKRHLAPSST--------------------- 49 (326)
T ss_pred cEEEEEEEECCCeEEcHHHHHHhcC---CC---------hhhEeeccCeEEEEeCCCCC---------------------
Confidence 7999999999999999999998753 11 25788999999999987765
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKD 183 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~ 183 (402)
+..+|+.+|+++||+++|++++|||.||++++++...+..+..+++.||+.+.+ +++++++|+|++.||++|.+
T Consensus 50 ----~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~--~~~v~~~Casg~~al~~A~~ 123 (326)
T CHL00203 50 ----SLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAV--AFDITAACSGFILALVTATQ 123 (326)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCc--eeeecccchhHHHHHHHHHH
Confidence 389999999999999999999999999999888843345678999999998754 78999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee----ecCCCc
Q 044410 184 IAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT----TVPDTE 259 (402)
Q Consensus 184 ~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~----~~p~~~ 259 (402)
+|++|..+++|||++|.+|..+ ++++ +....+|||||+|+||++.+. .++. .+.+...+.. .++...
T Consensus 124 ~i~sg~~~~~Lvv~~e~~s~~~-~~~~-----~~~~~~fgDga~A~ll~~~~~-~~~~--~~~~~t~g~~~~~~~~~~~~ 194 (326)
T CHL00203 124 FIQNGSYKNILVVGADTLSKWI-DWSD-----RKTCILFGDGAGAAIIGASYE-NSIL--GFKLCTDGKLNSHLQLMNKP 194 (326)
T ss_pred HHHcCCCCEEEEEEehhhhCcC-Cccc-----CCceEEEcceeeEEEEEEcCC-CCeE--EEEEEEcCCCcceEEecCCC
Confidence 9999999999999999999644 4443 224689999999999998654 2211 1222222110 111100
Q ss_pred -c--cccceeecC-ce-EEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcccc
Q 044410 260 -N--YISGQLKEM-GT-YCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKL 332 (402)
Q Consensus 260 -~--~~~~~~~~~-g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~ 332 (402)
. .......++ .. .+.+ +++++.+..+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|++|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~hq~~~~~~~~~~~~lgl~~~k~ 273 (326)
T CHL00203 195 VNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISI-DEVDWFILHQANKRILEAIANRLSVPNSKM 273 (326)
T ss_pred CCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHh
Confidence 0 000000001 11 2233 788888888889999999999999997 999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410 333 WASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 333 ~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
.. ++++|||++|||+|++|++++++ |++++| |+|++++||+|++|+++|+||+
T Consensus 274 ~~---~l~~~Gn~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 274 IT---NLEKYGNTSAASIPLALDEAIQN----NKIQPG---QIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred hh---HHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhhhheEEEEEeC
Confidence 76 49999999999999999999988 889999 9999999999999999999995
No 15
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.8e-50 Score=391.64 Aligned_cols=314 Identities=21% Similarity=0.262 Sum_probs=256.7
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|+|+|+++++|+|+.+.++ .. .+++++++||++||++.+++
T Consensus 5 ~~I~~ig~~~P~~~v~~~e~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~~--------------------- 51 (325)
T PRK12879 5 ARITGIGTYVPPRVLTNDDLETFID---TS---------DEWIVQRTGIKERRIAHVEE--------------------- 51 (325)
T ss_pred CEEEEEEEECCCcEEcHHHHHHhcC---CC---------HHHhhhccCceEEEECCCCC---------------------
Confidence 7999999999999999999988642 11 25789999999999997765
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+..+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+|++.||+++.. .++++++|+|++.||.+|.
T Consensus 52 ----~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~~~--~~~v~~~C~~~~~al~~A~ 125 (325)
T PRK12879 52 ----YTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAA--AFDINAACAGFLYGLETAN 125 (325)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCc--EEEECccchHHHHHHHHHH
Confidence 3899999999999999999999999999999987 78899999999999998654 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT 258 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~ 258 (402)
++|++|..++||||++|+++..+ ++.+ +....+|||||+|+||++++...++. ...+...+. .+.+..
T Consensus 126 ~~l~~g~~~~~Lvv~~e~~s~~~-~~~~-----~~~~~~~GDgAaA~ll~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 197 (325)
T PRK12879 126 GLITSGLYKKVLVIGAERLSKVT-DYTD-----RTTCILFGDGAGAVVLEATENEPGFI--DYVLGTDGDGGDILYRTGL 197 (325)
T ss_pred HHHHcCCCCEEEEEEehhhcCcC-Cccc-----cCceEEEeecceEEEEEecCCCCCeE--EEEEEEcCCCCCeEEEcCC
Confidence 99999999999999999988633 3322 22457999999999999877512110 011111110 011111
Q ss_pred cccccceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHH
Q 044410 259 ENYISGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASR 336 (402)
Q Consensus 259 ~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~ 336 (402)
...........+..+.+ +++++..+.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||++++|+..+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~h~~~~~~~~~~~~~lg~~~~~~~~~- 275 (325)
T PRK12879 198 GTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTK-DDIDWVIPHQANLRIIESLCEKLGIPMEKTLVS- 275 (325)
T ss_pred CCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHhhhh-
Confidence 11000000111222333 678898888999999999999999997 999 99999999999999999999999999874
Q ss_pred HHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410 337 YVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 337 ~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
+++|||+++||+|++|++++++ |++++| |+++++++|+|++|+++|+||+
T Consensus 276 --~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 276 --VEYYGNTSAATIPLALDLALEQ----GKIKPG---DTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred --HhhhCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhEEEEEEeC
Confidence 8999999999999999999988 889999 9999999999999999999994
No 16
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.8e-50 Score=391.02 Aligned_cols=320 Identities=17% Similarity=0.167 Sum_probs=256.8
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.|+|+|+|+++++|+++.+.+.+...... ....++.+.+||++||+..+++
T Consensus 6 v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~-----~~~~~i~~~~Gi~~R~~~~~~~--------------------- 59 (338)
T PRK09258 6 VAILSLAYELAPVVVTSSEIEERLAPLYERLR-----LPPGQLEALTGIRERRWWPEGT--------------------- 59 (338)
T ss_pred eEEEEEEecCCCccCcHHHHHHHhhhcccccC-----CChhHhhhhcCceeEecCCCCC---------------------
Confidence 79999999999999999999987543211100 1135688899999999986544
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+..+|+.+|+++||+++|++++|||+||++++++ +..|+++.+++++||+++... .++++++|+|++.||++|.
T Consensus 60 ----~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~-~~~v~~~C~~~~~al~~A~ 134 (338)
T PRK09258 60 ----QLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCA-NFDVSNACLGFLNGMLDAA 134 (338)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCc-eeehhhhhHHHHHHHHHHH
Confidence 3899999999999999999999999999999987 788999999999999986432 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCC------ccc----hhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPS------ETH----LDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ 252 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~------~~~----~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~ 252 (402)
++|++|..++||||++|+++..+ ++. +.+ ........+|||||+|+||++.+. .. ...++.....
T Consensus 135 ~~i~~g~~~~~Lvv~~e~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~-~~---~~~~~~~~~~ 209 (338)
T PRK09258 135 NMIELGQIDYALVVSGESAREIV-EATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSL-HP---RGHRLLGGVT 209 (338)
T ss_pred HHHHcCCCCEEEEEEecccchhc-cchhhhhccCccchhhhhhccceEEecccceEEEEecCCC-CC---Ccceeeeeee
Confidence 99999999999999999988632 211 110 111123568999999999998654 21 1133433222
Q ss_pred eecCCCcccccceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc
Q 044410 253 TTVPDTENYISGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE 330 (402)
Q Consensus 253 ~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e 330 (402)
...+...+...|. ...+.+ ++.+++.....++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++
T Consensus 210 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~-~did~~i~H~~~~~~~~~~~~~lgl~~~ 284 (338)
T PRK09258 210 RAATEHHELCQGG----RDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAV-EQVDRVICHQVGAAHTRAILKALGIDPE 284 (338)
T ss_pred ecCCCcccccccC----ccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEecCCCCHHHHHHHHHHhCCCHH
Confidence 2233322222221 112222 567777788888899999999999997 999 999999999999999999999999
Q ss_pred ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410 331 KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 331 k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
|++.+ +++||||++||+|++|++++++ |++++| |+|++++||+|++|+++++||
T Consensus 285 k~~~~---~~~~GN~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 285 KVFTT---FPTLGNMGPASLPITLAMAAEE----GFLKPG---DRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred Hceeh---HhhhCCcHHhHHHHHHHHHHHh----CCCCCC---CEEEEEEechhHhhHhHeeeC
Confidence 99875 8999999999999999999988 889999 999999999999999999997
No 17
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.3e-49 Score=392.23 Aligned_cols=352 Identities=18% Similarity=0.245 Sum_probs=271.1
Q ss_pred CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhh----cCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410 21 GPTATILAIGTSTPPN--CFYQADYPDFYFRV----TNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE 94 (402)
Q Consensus 21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 94 (402)
+| +|++..++|.|+. +++.+.+.+..... ...+..++..+..+||.+++||.+|++..+.. .
T Consensus 66 ~~-vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~-----------~ 133 (478)
T PLN02932 66 KP-VYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGL-----------Q 133 (478)
T ss_pred Cc-EEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeecccc-----------c
Confidence 67 9999999999876 68888888776432 11111133367789999999999999985432 1
Q ss_pred CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccch
Q 044410 95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT-QGCYM 173 (402)
Q Consensus 95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~C~~ 173 (402)
..+++++++.+++.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||++++.. .++++ +||+|
T Consensus 134 ~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~-~fdL~gmGCSg 212 (478)
T PLN02932 134 CLPLQQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIK-SLNLGGMGCSA 212 (478)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCce-EEEeccchhhh
Confidence 12478899999999999999999999999999999999999999999999999999999999986654 78998 89999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee
Q 044410 174 GGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT 253 (402)
Q Consensus 174 ~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~ 253 (402)
++.||++|++++++++.++||||++|.+|..+ ++.+ +++.+.+.++|||||+|+||++.+.... ...+++......
T Consensus 213 gl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~r~~l~t~~LFgDGAAAvlLs~~~~~~~--~~~~~L~~~v~t 288 (478)
T PLN02932 213 GVIAIDAAKSLLQVHRNTYALVVSTENITQNL-YLGN-NKSMLVTNCLFRIGGAAILLSNRSRDRK--RAKYELVHTVRV 288 (478)
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEEEeeccccc-CCCc-chhhhccceeecccceEEEEeccccccc--CcceEEEeeeee
Confidence 99999999999999999999999999999765 3433 3455678899999999999998653111 234566543332
Q ss_pred ec---CCCcccccceeecCce-EEEeCCchhHHHHHhHHHHH----------------------HHhhcc--CCCCC--C
Q 044410 254 TV---PDTENYISGQLKEMGT-YCHLSRDVPVAIGNYVDKCL----------------------SNAMSP--IGISD--W 303 (402)
Q Consensus 254 ~~---p~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~--~gl~~--~ 303 (402)
+. +.+.+.+.+..+++|. .+.++++++..+.+.++..+ +++++. .++.+ .
T Consensus 289 ~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~ 368 (478)
T PLN02932 289 HTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFK 368 (478)
T ss_pred eeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHH
Confidence 22 2222223333333443 55666666655444433111 111111 12221 1
Q ss_pred cce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEc
Q 044410 304 NSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFG 382 (402)
Q Consensus 304 ~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G 382 (402)
++| +|++||+|+++++.+++.||++++++..++.++++||||+|+|+++.|+++.++ |++++| |+|++++||
T Consensus 369 ~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~----grik~G---d~vl~iaFG 441 (478)
T PLN02932 369 LAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAK----GRMKKG---DRIWQIALG 441 (478)
T ss_pred hhhceEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHc----CCCCCC---CEEEEEEEe
Confidence 457 999999999999999999999997776667789999999999999999999887 999999 999999999
Q ss_pred ccccceeeEEeeec
Q 044410 383 PGLTVETVVLQSVS 396 (402)
Q Consensus 383 ~G~~~~~~ll~~~~ 396 (402)
+|++|++++||...
T Consensus 442 sGf~~~s~vw~~~~ 455 (478)
T PLN02932 442 SGFKCNSSVWVALR 455 (478)
T ss_pred ccHHHHHHHHHHhc
Confidence 99999999998644
No 18
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=1.9e-48 Score=377.81 Aligned_cols=306 Identities=24% Similarity=0.303 Sum_probs=253.3
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|+|+|+++++++++.+.++ . ..+++.+++||++||++.+++
T Consensus 2 ~~I~~i~~~lP~~~~~~~~~~~~~~---~---------~~~~~~~~~Gi~~r~~~~~~~--------------------- 48 (320)
T cd00830 2 ARILGIGSYLPERVVTNDELEKRLD---T---------SDEWIRTRTGIRERRIADPGE--------------------- 48 (320)
T ss_pred CEEEEEEEECCCcEEcHHHHHHHcC---C---------CHHHhhhccCceEEeeCCCCC---------------------
Confidence 6899999999999999999988752 1 136788999999999997755
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+..+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+|+.+||+++.+ +++++++|++++.||.+|.
T Consensus 49 ----~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~--~~~v~~~C~s~~~al~~A~ 122 (320)
T cd00830 49 ----TTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNAA--AFDINAACSGFLYGLSTAA 122 (320)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc--EeeccccchHHHHHHHHHH
Confidence 3899999999999999999999999999999888 66899999999999998544 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI 262 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 262 (402)
++|++|+.++||||++|.++..+ ++.+ +...++|||||+|+||++.+...+ +........+...+.+
T Consensus 123 ~~i~~g~~~~vLvv~~e~~s~~~-~~~~-----~~~~~~~GDgAaA~ll~~~~~~~~-------i~~~~~~~~~~~~~~~ 189 (320)
T cd00830 123 GLIRSGGAKNVLVVGAETLSRIL-DWTD-----RSTAVLFGDGAGAVVLEATEEDPG-------ILDSVLGSDGSGADLL 189 (320)
T ss_pred HHHHcCCCCEEEEEEehhhcccc-Cccc-----CCceEEEeccceEEEEEecCCCCc-------EEEEEEEEcCCCCCeE
Confidence 99999999999999999998643 3321 235689999999999998765111 1111111122222111
Q ss_pred cce---------e-ecCceEEE-eCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc
Q 044410 263 SGQ---------L-KEMGTYCH-LSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE 330 (402)
Q Consensus 263 ~~~---------~-~~~g~~~~-~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e 330 (402)
.+. . ...+..+. .++.++..+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgl~~~ 268 (320)
T cd00830 190 TIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTP-DDIDWFVPHQANLRIIEAVAKRLGLPEE 268 (320)
T ss_pred EeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHH
Confidence 111 0 11112233 3788998888999999999999999997 999 999999999999999999999999
Q ss_pred ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEE
Q 044410 331 KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL 392 (402)
Q Consensus 331 k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll 392 (402)
|+.. ++++|||+++||+|++|++++++ |++++| |+++++++|+|++|+++++
T Consensus 269 ~~~~---~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 269 KVVV---NLDRYGNTSAASIPLALDEAIEE----GKLKKG---DLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred Hhhh---hHHhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchHHhhHHhhC
Confidence 9975 49999999999999999999998 889999 9999999999999999875
No 19
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=6.2e-48 Score=374.09 Aligned_cols=310 Identities=22% Similarity=0.275 Sum_probs=256.8
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|+|+|+++++++++.+.++ .. ..++++++||++||+..+++
T Consensus 3 ~~I~~i~~~~P~~~~~~~~~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~--------------------- 49 (318)
T TIGR00747 3 AGILGTGSYLPEKVLTNADLEKMVD---TS---------DEWIVTRTGIKERRIAADDE--------------------- 49 (318)
T ss_pred CEEEEEEEECCCceecHHHHHHhcC---Cc---------hHHeecccCceEEEECCCCC---------------------
Confidence 7899999999999999999988752 11 25688899999999987765
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
++.+|+.+|+++||+++|++++|||.|+++++++ +..|+.+.+++..||+++.+ +++++++|++++.||++|.
T Consensus 50 ----~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~--~~~v~~~C~s~~~al~~A~ 123 (318)
T TIGR00747 50 ----TSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIP--AFDLSAACAGFIYALSVAK 123 (318)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCc--EeehhhhhHHHHHHHHHHH
Confidence 3899999999999999999999999999999888 77899999999999998754 7889999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT 258 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~ 258 (402)
++|++|..+++||+++|+++..+ ++.+ +....+|||||+|+||++++...++ ..+.+...+. ..+|..
T Consensus 124 ~~i~~g~~~~~Lvv~~e~~~~~~-~~~~-----~~~~~~~GDGAaA~lL~~~~~~~~i--~~~~~~~~~~~~~~~~~~~~ 195 (318)
T TIGR00747 124 QYIESGKYKTVLVVGAEKLSSTL-DWTD-----RGTCVLFGDGAGAVVLGESEDPGGI--ISTHLGADGTQGEALYLPAG 195 (318)
T ss_pred HHHHcCCCCEEEEEEehhhcCcC-CcCC-----CCeEEEEecceeEEEEeecCCCCcE--EEEEEEEcCCCcceEEECCC
Confidence 99999999999999999988533 3332 1235789999999999987751111 1122222211 123332
Q ss_pred cccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 044410 259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRY 337 (402)
Q Consensus 259 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~ 337 (402)
... .....++....++++++...+.+.++++++|+++|+++ +|| +|++||++.++++.+++.||+|++|++.+
T Consensus 196 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~-- 269 (318)
T TIGR00747 196 GRP---TSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDP-EDIDWFVPHQANLRIIEALAKRLELDMSQVVKT-- 269 (318)
T ss_pred CcC---CCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHeeeh--
Confidence 211 01112233344788888888899999999999999997 999 99999999999999999999999999864
Q ss_pred HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410 338 VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 338 ~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
+++|||+++||+|++|++++++ |++++| |+|+++++|+|++|+++++||
T Consensus 270 -~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 270 -VHKYGNTSAASIPLALDELLRT----GRIKPG---DLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred -HhhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeeEEEEEC
Confidence 9999999999999999999998 889999 999999999999999999997
No 20
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=2e-47 Score=373.66 Aligned_cols=317 Identities=17% Similarity=0.148 Sum_probs=245.8
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|+|+|+++++|+++.+.++ .. .+++.+++||++||++.+++
T Consensus 5 v~I~~~~~~lP~~~v~~~~l~~~~g---~~---------~~~~~~~~Gi~~r~~~~~~~--------------------- 51 (339)
T PRK06840 5 VGIVGTGVYLPKDVMTAEEIAEKTG---IP---------EEVVIEKFGIYEKPVPGPED--------------------- 51 (339)
T ss_pred eEEEEEEEeCCCcccCHHHHHHHhC---CC---------HHHHhhhcCcceEeeCCCCC---------------------
Confidence 8999999999999999999987652 11 26778899999999997655
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecC-C-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFY-G-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLA 181 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~-~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A 181 (402)
+..+|+.+|+++||+++|++++|||+||+++++ + +..|+.+.+|+++||+++.. +++++++|++++.||.+|
T Consensus 52 ----~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~~~--~~~v~~~C~~~~~al~~A 125 (339)
T PRK06840 52 ----HTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKNAW--AFDIMAVCASFPIALKVA 125 (339)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCCcc--cccccccchHHHHHHHHH
Confidence 389999999999999999999999999987654 4 67899999999999998654 788999999999999999
Q ss_pred HHHHHc-CCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecC
Q 044410 182 KDIAEN-NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVP 256 (402)
Q Consensus 182 ~~~i~~-g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p 256 (402)
.++|++ |..+++|||++|+.+..+ ++.++ ... ..++|||||+|+||++++...++. ...+...+. ..+|
T Consensus 126 ~~~l~~~g~~~~~Lvv~~~~~s~~~-~~~~~--~~~-~~~~~GDgAaA~ll~~~~~~~~il--~~~~~t~~~~~~~~~~~ 199 (339)
T PRK06840 126 KDLLYSDPSIENVLLVGGYRNSDLV-DYDNP--RTR-FMFNFAAGGSAALLKKDAGKNRIL--GSAIITDGSFSEDVRVP 199 (339)
T ss_pred HHHHhcCCCccEEEEEeeccccccc-CcCCC--Cee-eeccCCCceeEEEEEecCCCCceE--EEEEEEcCCccceEEec
Confidence 999999 778999999999988633 33221 111 113479999999999876511110 011111111 1122
Q ss_pred CCcc--cccceeecCc-eEEEe-CCchhHH-----HHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcC
Q 044410 257 DTEN--YISGQLKEMG-TYCHL-SRDVPVA-----IGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLG 326 (402)
Q Consensus 257 ~~~~--~~~~~~~~~g-~~~~~-~~~v~~~-----~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lg 326 (402)
.... .........+ ..+.+ +++.+.. ....++++++++|+++|+++ +|| +|++||.|.++++.++++||
T Consensus 200 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~~Lg 278 (339)
T PRK06840 200 AGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYTP-KDIDYLAILHMKRSAHIALLEGLG 278 (339)
T ss_pred CCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCcCHHHHHHHHHHcC
Confidence 1111 1000000111 12222 3444542 23467899999999999997 999 99999999999999999999
Q ss_pred CCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410 327 LRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST 397 (402)
Q Consensus 327 i~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~ 397 (402)
++++|+. ++++||||+|+|+|++|++++++ |++++| |++++++||+|++|+++++||.++
T Consensus 279 l~~~~~~----~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~ill~~~G~G~s~~~~~l~~~~~ 338 (339)
T PRK06840 279 LTEEQAI----YLDEYGHLGQLDQILSLHLALEQ----GKLKDG---DLVVLVSAGTGYTWAATVIRWGPV 338 (339)
T ss_pred CCHHHeE----eHHhccchhhhhHHHHHHHHHHc----CCCCCC---CEEEEEEEehhhheeEEEEEecCC
Confidence 9999985 38999999999999999999987 889999 999999999999999999999754
No 21
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.1e-46 Score=375.61 Aligned_cols=351 Identities=17% Similarity=0.217 Sum_probs=261.0
Q ss_pred CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCCh
Q 044410 21 GPTATILAIGTSTPPN--CFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSL 98 (402)
Q Consensus 21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 98 (402)
+| +|++..++|.|+. +++.+.+.+.......-+ ++..+...++.+++||.+..+. |.... ..+.
T Consensus 96 ~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~ri~~~sgig~~t~~-p~~~~----------~~~~ 161 (502)
T PLN02377 96 RP-VYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFD--DSSLEFQRKILERSGLGEDTYV-PEAMH----------YIPP 161 (502)
T ss_pred CC-EEEEeeeeecCCccccccHHHHHHHHHHhCCCC--HHHHHHHHHHHHhcCCCCcccc-Cchhc----------cCCc
Confidence 57 9999999999876 688888888765332111 3445667899999999885444 43210 1235
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeec-cccchHHH
Q 044410 99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYT-QGCYMGGT 176 (402)
Q Consensus 99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~C~~~~~ 176 (402)
+..++.+.+.+.+++..|+++||+++|++|+|||+||+ ++++ +..|+++.+|+++||++++.. .++++ +||+|++.
T Consensus 162 ~~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~-afdL~gmGCsggl~ 239 (502)
T PLN02377 162 RPSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIR-SFNLGGMGCSAGVI 239 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCe-EEecccchhhHHHH
Confidence 56899999999999999999999999999999999987 7888 689999999999999986654 88998 79999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCC-ceEEEeeeeeec
Q 044410 177 VIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESP-LFQILSCTQTTV 255 (402)
Q Consensus 177 al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~-~~~~~~~~~~~~ 255 (402)
||++|++++++++.++||||++|.+|..+ ++.+ ++...+..++|||||+|+||++.+........ .+.+........
T Consensus 240 aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d 317 (502)
T PLN02377 240 AVDLAKDMLQVHRNTYAVVVSTENITQNW-YFGN-KKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGAD 317 (502)
T ss_pred HHHHHHHHHHcCCCCEEEEEEEecccccc-CCCC-CccccccceeeccccEEEEEecccccccccccccceEEEEEEEEc
Confidence 99999999999999999999999999755 3443 23334456899999999999985431110000 112332222111
Q ss_pred CCCcccccceeecCc-eEEEe-------------------CCch-------hHHHHHhHHHHHHHhhccCC-CCCCcce-
Q 044410 256 PDTENYISGQLKEMG-TYCHL-------------------SRDV-------PVAIGNYVDKCLSNAMSPIG-ISDWNSL- 306 (402)
Q Consensus 256 p~~~~~~~~~~~~~g-~~~~~-------------------~~~v-------~~~~~~~~~~~i~~~L~~~g-l~~~~di- 306 (402)
+...+.+.+...+.| ..+.+ ++.+ +.++...+++.+++.++..+ ... +++
T Consensus 318 ~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~-~did 396 (502)
T PLN02377 318 DKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFK-LAFD 396 (502)
T ss_pred CCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcH-hhcC
Confidence 111111111100011 01111 2222 33455566677777776654 333 678
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEccccc
Q 044410 307 FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLT 386 (402)
Q Consensus 307 ~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~ 386 (402)
+|++||+|+++++.+++.||+++++...++.++++||||+|+|+++.|+++.++ |++++| |+|++++||+|++
T Consensus 397 hf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~----grik~G---d~VlliaFGsGf~ 469 (502)
T PLN02377 397 HFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAK----GRMRKG---NRVWQIAFGSGFK 469 (502)
T ss_pred EEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHc----CCCCCC---CeEEEEEEccccE
Confidence 999999999999999999999986555566679999999999999999999987 999999 9999999999999
Q ss_pred ceeeEEeeecc
Q 044410 387 VETVVLQSVST 397 (402)
Q Consensus 387 ~~~~ll~~~~~ 397 (402)
|++++|||...
T Consensus 470 ~~s~v~~~~~~ 480 (502)
T PLN02377 470 CNSAVWEALRH 480 (502)
T ss_pred eeeEEEEEecC
Confidence 99999999653
No 22
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=2e-47 Score=374.48 Aligned_cols=303 Identities=17% Similarity=0.210 Sum_probs=242.6
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|+|+|+++++|+++.+.++ .. .+|+.+++||++||++.+++
T Consensus 3 v~I~~~g~ylP~~~v~~~el~~~~~---~~---------~~~i~~~~Gi~~R~~~~~~~--------------------- 49 (347)
T PRK04262 3 VGIVGYGAYIPRYRIKVEEIARVWG---DD---------PEAIKRGLGVEEKSVPGPDE--------------------- 49 (347)
T ss_pred eeEEEEEEeCCCEEecHHHHHHHhC---cC---------HHHHhhccCeeeeecCCCCc---------------------
Confidence 7999999999999999999998752 11 37899999999999997766
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+..+|+.+|+++||+++|++++|||+||++++++ +..|+.+.+|+++||+++... +++++++|+|++.+|++|.
T Consensus 50 ----~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~-~~dv~~~C~~~~~aL~~A~ 124 (347)
T PRK04262 50 ----DTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLT-AADLEFACKAGTAALQAAM 124 (347)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCce-EEEHHHhHHHHHHHHHHHH
Confidence 3899999999999999999999999999999988 788999999999999986432 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI 262 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 262 (402)
++|++|+.++||||++|+... +|.+ . ...+|||||+|+||+.++. ..++...... .++..+.+
T Consensus 125 ~~i~sg~~~~aLVv~~e~~~~---~~~~-----~-~~~~~GDGA~A~ll~~~~~-------~~~i~~~~~~-~~d~~d~~ 187 (347)
T PRK04262 125 GLVKSGMIKYALAIGADTAQG---APGD-----A-LEYTAAAGGAAFIIGKEEV-------IAEIEATYSY-TTDTPDFW 187 (347)
T ss_pred HHHHcCCCCEEEEEEEeeecc---CCCC-----C-CCCcCCCCcEEEEEecCcc-------cceeeccccc-cccchhhc
Confidence 999999999999999998432 3322 1 1346899999999997543 1223221111 11111111
Q ss_pred c---ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHH
Q 044410 263 S---GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYV 338 (402)
Q Consensus 263 ~---~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~ 338 (402)
. +.....+.. +... ....+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++|++.++ +
T Consensus 188 ~~~~~~~~~~~~~--~~~~--~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~-~ 261 (347)
T PRK04262 188 RREGEPYPRHGGR--FTGE--PAYFKHIISAAKGLMEKLGLKP-SDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGL-L 261 (347)
T ss_pred CCCCCcCCCcCce--ecch--HHHHHHHHHHHHHHHHHhCcCH-HHhceeecCCCchHHHHHHHHHcCCCHHHhhccc-h
Confidence 1 000111111 1111 1233578899999999999997 999 999999999999999999999999998653 4
Q ss_pred HHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410 339 LREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS 396 (402)
Q Consensus 339 l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~ 396 (402)
+++||||+|||+|++|++++++ +++| |+|++++||+|++|++++++|.+
T Consensus 262 ~~~~GNt~sAsi~~~L~~~~~~------~~~G---d~vll~~~G~G~~~~~~~~~~~~ 310 (347)
T PRK04262 262 TPYIGNTYSGSALLGLAAVLDV------AKPG---DRILVVSFGSGAGSDAFSITVTD 310 (347)
T ss_pred hhhhCChHHHHHHHHHHHHHHh------CCCC---CEEEEEecCCCcceeeEEEEech
Confidence 7999999999999999998864 6788 99999999999999999999854
No 23
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.3e-47 Score=366.72 Aligned_cols=310 Identities=24% Similarity=0.282 Sum_probs=255.4
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|+|+|+++++++++.+..+ .. ..+|.+++||++|+++.+++
T Consensus 4 v~I~ai~~~lP~~~~~~~~~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~--------------------- 50 (319)
T PRK09352 4 AKILGTGSYLPERVVTNDDLEKMVD---TS---------DEWIVTRTGIKERRIAAPDE--------------------- 50 (319)
T ss_pred eEEEEEEEECCCeEEcHHHHHHHcC---CC---------HHHhhhhcCeEEEEeCCCCC---------------------
Confidence 7999999999999999999998742 11 25788899999999987765
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+..+|+.+|++++|+++|+++++||.|+++++++ +..|+.+.+|+..||+.+.+ .++++++|++++.||..|.
T Consensus 51 ----~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~~~--~~~v~~~Casg~~al~~A~ 124 (319)
T PRK09352 51 ----TTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAA--AFDLSAACSGFVYALSTAD 124 (319)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCCCc--EeeccccchhHHHHHHHHH
Confidence 3899999999999999999999999999999887 66889999999999997644 7888999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee----ecCCC
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT----TVPDT 258 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~----~~p~~ 258 (402)
++|++|..++|||+++|+++..+ ++.+ +....+|||||+|+||++++. .+. ..+++...+.. .+|..
T Consensus 125 ~~i~~g~~~~vLvv~~e~~s~~~-~~~~-----~~~~~~~gDGaaA~ll~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~ 195 (319)
T PRK09352 125 QFIRSGAYKNVLVIGAEKLSRIV-DWTD-----RSTCVLFGDGAGAVVLGASEE-PGI--LSTHLGSDGSYGDLLYLPGG 195 (319)
T ss_pred HHHHcCCCCEEEEEEehhhcccc-Cccc-----CCceEEEeccceEEEEEEcCC-CCe--EEEEEEEcCCCCCeEEeCCC
Confidence 99999999999999999988633 3322 224579999999999999875 221 11233322211 22332
Q ss_pred cccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 044410 259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRY 337 (402)
Q Consensus 259 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~ 337 (402)
.....+. .++....++++++...+.+.++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++++..
T Consensus 196 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~--- 268 (319)
T PRK09352 196 GSRGPAS---PGYLRMEGREVFKFAVRELAKVAREALEAAGLTP-EDIDWLVPHQANLRIIDATAKKLGLPMEKVVV--- 268 (319)
T ss_pred CCCCCCC---CCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHhhh---
Confidence 2111110 1111223677888888889999999999999997 999 9999999999999999999999999865
Q ss_pred HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410 338 VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 338 ~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
++.+|||++++|++++|++++++ |++++| |+++++++|+|++|+++++||+
T Consensus 269 ~~~~~Gn~~~a~~~~~L~~~~~~----g~~~~G---d~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 269 TVDKYGNTSAASIPLALDEAVRD----GRIKRG---DLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred hHHhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEeC
Confidence 49999999999999999999998 889999 9999999999999999999995
No 24
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.6e-47 Score=375.58 Aligned_cols=330 Identities=17% Similarity=0.214 Sum_probs=253.9
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.|+|+|+|+++++|+++.+.+....... ....+||++++||++||++.+++. .+.
T Consensus 3 v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~-----~~~~~~i~~~~Gi~~R~~~~~~~~---~~~-------------- 60 (378)
T PRK06816 3 VYITSTGAFLPGEPVSNDEMEAYLGLINGKP-----SRARRIILRNNGIKTRHYALDPEG---RPT-------------- 60 (378)
T ss_pred eEEEeeeecCCCCccCHHHHHHHHhhccCCc-----HHHHHHHHHhCCCceEEEEECCCC---CCC--------------
Confidence 7999999999999999999988764322111 112368999999999999875421 111
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
.+..+|+.+|+++||+++|++++|||+||++++++ +..|+.+..|+++||+++.. +++++++|+|++.||++|.
T Consensus 61 ---~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~--~~~v~~~Cas~~~al~~A~ 135 (378)
T PRK06816 61 ---HSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIE--VVSSAGVCAAGMMALKYAY 135 (378)
T ss_pred ---CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCc--eeeecCcCHHHHHHHHHHH
Confidence 14789999999999999999999999999999988 78899899999999998754 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccc------------h----hhhhhhhhhccCcEEEEEccCCCCCCCCCCceE
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETH------------L----DVLVVQAVFGDGAGAAIIGADSDISNHESPLFQ 246 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~------------~----~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~ 246 (402)
++|++|+.++||||++|++|..+ ++.+.+ . +.....++|||||+|+||++.+...+. .+.
T Consensus 136 ~~i~sg~~~~vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~---~l~ 211 (378)
T PRK06816 136 LSVKAGESRNAVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGL---SLR 211 (378)
T ss_pred HHHHCCCCCEEEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCc---eEE
Confidence 99999999999999999998643 222100 0 000113479999999999976551121 122
Q ss_pred E--Eeeeee------ec-CCCc-----ccccceee------cCc-eEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCc
Q 044410 247 I--LSCTQT------TV-PDTE-----NYISGQLK------EMG-TYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWN 304 (402)
Q Consensus 247 ~--~~~~~~------~~-p~~~-----~~~~~~~~------~~g-~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~ 304 (402)
+ ....+. .. +... ....|... .++ ..+.+ ++.+++.+...++++++++|+++|+++ +
T Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~ 290 (378)
T PRK06816 212 IDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKRNLDP-D 290 (378)
T ss_pred EEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHcCCCh-h
Confidence 1 111110 01 1100 01122210 011 12222 566777788888999999999999997 9
Q ss_pred ce-EEEEcCCCHHHHHHHHHHc-----CCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEE
Q 044410 305 SL-FYVVHPGGDGLLDQVEKTL-----GLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVL 378 (402)
Q Consensus 305 di-~~i~H~~~~~~~~~~~~~l-----gi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll 378 (402)
|| +|++||+|.++++.+.++| |+|++|++.+ +++||||+|||+|++|++++++ |++++| |+|++
T Consensus 291 DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~~---~~~~GNt~sAsipi~L~~a~~~----g~~~~G---d~vl~ 360 (378)
T PRK06816 291 DIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFTN---LATVGNTGSASIYIMLDELLNS----GRLKPG---QKILC 360 (378)
T ss_pred hCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEEe---ccccccccchHHHHHHHHHHHc----CCCCCC---CEEEE
Confidence 99 9999999999999999987 9999999864 9999999999999999999998 999999 99999
Q ss_pred EEEccc-ccceeeEEeee
Q 044410 379 FGFGPG-LTVETVVLQSV 395 (402)
Q Consensus 379 ~~~G~G-~~~~~~ll~~~ 395 (402)
++.|+| +++|.++|.|.
T Consensus 361 ~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 361 FVPESGRFSTAFMLLTVV 378 (378)
T ss_pred EEecccchhheeEEEEEC
Confidence 988776 99999999984
No 25
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.3e-46 Score=373.22 Aligned_cols=350 Identities=17% Similarity=0.237 Sum_probs=260.9
Q ss_pred CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCCh
Q 044410 21 GPTATILAIGTSTPPN--CFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSL 98 (402)
Q Consensus 21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 98 (402)
+| +|++..++|.|+. +++.+.+.+.......- .++..+...++.+++|+.+..+..+.-. ....
T Consensus 112 ~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~~~~sg~g~~ty~P~~~~-----------~~~~ 177 (521)
T PLN02854 112 KP-VYLVDFACYKPEDERKISVDSFLTMTEENGSF--EDETVQFQRRISTRSGLGDETYLPRGIT-----------SRPP 177 (521)
T ss_pred Cc-EEEEeeeeecCCccccccHHHHHHHHHHcCCC--CHHHHHHHHHHHHhcCCCCccccCcccc-----------CCCC
Confidence 56 9999999999876 68888888876533211 1344567789999999998888644321 0112
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeec-cccchHHH
Q 044410 99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYT-QGCYMGGT 176 (402)
Q Consensus 99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~C~~~~~ 176 (402)
+..++..++.+......|++++|+++|++|+|||+||++ +++ +..|+++.+|+++||++++.. .++++ +||+|++.
T Consensus 178 ~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i~-afdLsgmGCSggl~ 255 (521)
T PLN02854 178 NLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDIK-SYNLGGMGCSAGLI 255 (521)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCce-EEecccchhhhHHH
Confidence 346777888899999999999999999999999999985 667 689999999999999986654 78987 89999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeec-
Q 044410 177 VIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTV- 255 (402)
Q Consensus 177 al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~- 255 (402)
||++|++++++++.++||||++|.+|.+++. .+|++...+.++|||||+|+||++.+...+ ...+++......++
T Consensus 256 aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~--g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~--~~k~~L~~~v~t~~~ 331 (521)
T PLN02854 256 SIDLANDLLKANPNSYAVVVSTENITLNWYF--GNDRSMLLCNCIFRMGGAAVLLSNKARDRK--RSKYQLVHTVRTHKG 331 (521)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeeeecCCCC--CCchhhhcceeeeccceeEEEEeccccccc--ccchheeeEEEEEEe
Confidence 9999999999999999999999999965532 123444455889999999999998653111 12233322111111
Q ss_pred --CCCcccccceeecCce-------------------EE-EeCCchhHHHHHh--HHHHHHHhhccCCCCCC-----cce
Q 044410 256 --PDTENYISGQLKEMGT-------------------YC-HLSRDVPVAIGNY--VDKCLSNAMSPIGISDW-----NSL 306 (402)
Q Consensus 256 --p~~~~~~~~~~~~~g~-------------------~~-~~~~~v~~~~~~~--~~~~i~~~L~~~gl~~~-----~di 306 (402)
+...+.+.+..+..|. .+ ++++.++...... +..++++.|.++|+++. +++
T Consensus 332 ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~di 411 (521)
T PLN02854 332 ADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAF 411 (521)
T ss_pred eCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccC
Confidence 1111111110000110 11 1244454433222 46678888999998742 468
Q ss_pred -EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccc
Q 044410 307 -FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGL 385 (402)
Q Consensus 307 -~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~ 385 (402)
||++||+|+++++.+++.||+++++...++.++++||||+|+|+|+.|+++.++ |++++| |+|++++||+|+
T Consensus 412 dhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~k----Grik~G---D~Vl~iaFGsGf 484 (521)
T PLN02854 412 EHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAK----GRVSAG---DRVWQIAFGSGF 484 (521)
T ss_pred cEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhh
Confidence 999999999999999999999954444444569999999999999999999988 999999 999999999999
Q ss_pred cceeeEEeeecc
Q 044410 386 TVETVVLQSVST 397 (402)
Q Consensus 386 ~~~~~ll~~~~~ 397 (402)
+|++++|||...
T Consensus 485 t~~sav~~~~~~ 496 (521)
T PLN02854 485 KCNSAVWKALRE 496 (521)
T ss_pred hhhheeeEEecc
Confidence 999999999764
No 26
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=8.9e-47 Score=368.98 Aligned_cols=304 Identities=16% Similarity=0.155 Sum_probs=238.8
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.|+|.|+|+++++|+++.+.++ .. .+|+.+++||++|+++.+++
T Consensus 2 ~~I~g~g~~lP~~~v~n~~l~~~~~---~~---------~~~i~~~~Gi~~r~v~~~~~--------------------- 48 (345)
T TIGR00748 2 AGIVGYGAYIPMYRIKVEEIARVWG---KD---------PESISNGLPVEEKAVPGLDE--------------------- 48 (345)
T ss_pred ccEEEEEEeCCCeeecHHHHHHHhC---CC---------HhHeeeccceeeeecCCCCC---------------------
Confidence 5899999999999999999987642 11 36889999999999997766
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+..+|+++|+++||+++|++++|||+||++++++ +..|..+..+++.||+++... .++++++|+|++.||++|.
T Consensus 49 ----~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~-~~dv~~aC~g~~~al~~A~ 123 (345)
T TIGR00748 49 ----DTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLT-AADLEFACKAGTAGIQACM 123 (345)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCce-EEEHHHhHHHHHHHHHHHH
Confidence 3899999999999999999999999999999888 778999999999999974432 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee--cCCCcc
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT--VPDTEN 260 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~ 260 (402)
++|++|..++||||++|+.+. +|.+ . ...+|||||+|+||++.+. . ..+....... .|+...
T Consensus 124 ~~i~sg~~~~vLVv~~d~~~~---~~~~-----~-~~~~~GDGAaA~vl~~~~~-~------~~~~~~~~~~~d~~~~~~ 187 (345)
T TIGR00748 124 GLVASGMIKYGLAIGADTAQG---APGD-----A-LEYTAGAGGAAYIIGEKNT-V------AYFEGTYSYTTDTPDFWR 187 (345)
T ss_pred HHHHcCCCCEEEEEEEeeccc---CCCc-----c-CcccCCCceEEEEEccCCc-c------eEeecccceecccccccc
Confidence 999999999999999999874 2322 1 2367899999999997553 1 1121111000 000000
Q ss_pred cccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHH
Q 044410 261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVL 339 (402)
Q Consensus 261 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l 339 (402)
.........+..+.....+++ .+.++++++|+++|+++ +|| +|++||+|.++++.+.+.||+|++|++.+. .+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~~~gl~~-~did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~-~~ 261 (345)
T TIGR00748 188 REGEPYPRHGGRFTGEPAYFH----HVVTAAKGLMEKLGLTP-EDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGL-LT 261 (345)
T ss_pred cCCCcCCCcCCeecChHHHHH----HHHHHHHHHHHHcCCCH-HHcCEEEeCCCChHHHHHHHHHcCCCHHHeeccc-cc
Confidence 000000000101111123444 34478899999999997 999 999999999999999999999999998751 13
Q ss_pred HhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410 340 REYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS 396 (402)
Q Consensus 340 ~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~ 396 (402)
++||||+|||+|++|+++++. +++| |+|++++||+|++|++++++|.+
T Consensus 262 ~~~GNt~sAsipl~L~~~~~~------~~~G---d~vll~~~G~G~s~~~~~~~~~~ 309 (345)
T TIGR00748 262 PRIGNTYSGATPVGLSAVLDI------AEPG---DRILAVSYGSGAGSDAFSIVVQD 309 (345)
T ss_pred cccCchhhhHHHHHHHHHHHh------cCCC---CEEEEEEecCCcceeEEEEEEch
Confidence 899999999999999998864 7889 99999999999999999999964
No 27
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.2e-45 Score=369.21 Aligned_cols=351 Identities=18% Similarity=0.234 Sum_probs=263.1
Q ss_pred CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCCh
Q 044410 21 GPTATILAIGTSTPPN--CFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSL 98 (402)
Q Consensus 21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 98 (402)
+| +|++..++|.|+. +++.+.+.+.......- .++..+...++.+++|+.+..+..+.- ... ..
T Consensus 100 ~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~~~~sglg~~t~~p~~~-~~~----------~~ 165 (511)
T PLN02192 100 RP-VYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSF--TEENLEFQRKILERSGLGESTYLPEAV-LNV----------PP 165 (511)
T ss_pred Cc-EEEEeeeeecCCccccccHHHHHHHHHHcCCC--CHHHHHHHHHHHHhcCCCCcccCChhh-ccC----------CC
Confidence 56 9999999999887 68888888876533211 134456778999999999988875432 111 11
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccchHHHH
Q 044410 99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT-QGCYMGGTV 177 (402)
Q Consensus 99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~C~~~~~a 177 (402)
+.-++..++.+..++..|+++||+++|++|+|||.||++++..+..|+++.+|+++||++.+.. .++++ +||+|++.|
T Consensus 166 ~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~-afdLsgmGCSggl~a 244 (511)
T PLN02192 166 NPCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIL-SYNLGGMGCSAGLIS 244 (511)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCce-EEEcccchhhhHHHH
Confidence 2245666778999999999999999999999999999875533789999999999999986554 89998 799999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCC
Q 044410 178 IRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPD 257 (402)
Q Consensus 178 l~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~ 257 (402)
|++|++++++++.++||||++|.+|..++..+ |++.....++|||||+|+||++.+. .. ..+.+++......+.+.
T Consensus 245 LdlA~~lL~a~~~~~aLVVstE~~S~n~y~g~--drs~lv~n~LFgDGAaAvLLs~~~~-~~-~~~k~~L~~~vrt~~~~ 320 (511)
T PLN02192 245 IDLAKHLLQVHPNSYALVISMENITLNWYFGN--DRSMLVSNCLFRMGGAAILLSNKRS-DR-RRSKYQLVHTVRTHKGA 320 (511)
T ss_pred HHHHHHHHHcCCCCeEEEEEEEeccccCCCCC--CHHHHhccccccccceEEEEecccc-cc-ccccceeeeeEEEEecC
Confidence 99999999999999999999999996553212 3444445589999999999998643 11 11234555444444554
Q ss_pred Cccccccee----ecCceEEEeCCchhHHHHHhHHHHHHHh--------------hccCC-------CC--C---Ccce-
Q 044410 258 TENYISGQL----KEMGTYCHLSRDVPVAIGNYVDKCLSNA--------------MSPIG-------IS--D---WNSL- 306 (402)
Q Consensus 258 ~~~~~~~~~----~~~g~~~~~~~~v~~~~~~~~~~~i~~~--------------L~~~g-------l~--~---~~di- 306 (402)
+++.+.+.. ...+..+.++++++..+...++..++.+ +.-.| +. + ..+|
T Consensus 321 dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Id 400 (511)
T PLN02192 321 DDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFE 400 (511)
T ss_pred ChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhc
Confidence 444333221 1233466777777776655544333221 00001 11 0 0357
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEccccc
Q 044410 307 FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLT 386 (402)
Q Consensus 307 ~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~ 386 (402)
+|++||+|+++++.+++.||+++++...++.++++||||+|+|+++.|+++.++ |++++| |+|++++||+|++
T Consensus 401 hf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eak----grik~G---DrVl~iaFGsGf~ 473 (511)
T PLN02192 401 HFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRIKKG---DRTWQIAFGSGFK 473 (511)
T ss_pred eEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEcchHh
Confidence 999999999999999999999985555555679999999999999999999987 999999 9999999999999
Q ss_pred ceeeEEeeecc
Q 044410 387 VETVVLQSVST 397 (402)
Q Consensus 387 ~~~~ll~~~~~ 397 (402)
|++++|||...
T Consensus 474 ~~sav~~~~~~ 484 (511)
T PLN02192 474 CNSAVWKALRT 484 (511)
T ss_pred hhhhheeeecc
Confidence 99999999654
No 28
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.3e-46 Score=370.35 Aligned_cols=342 Identities=19% Similarity=0.273 Sum_probs=254.6
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhc---CCCChhHHH---------HHHHHHHHHcCcceeecccchhHhhhCCCCc
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVT---NSDHKTELK---------EKFKRICERQSIKKRYFHLTEEILKENPNMC 91 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~---~~~~~~~~~---------~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~ 91 (402)
++|.|+|+|+|+++++|+|+++.+.... ..++..++. ...+||++++||++||++.+.+.+..
T Consensus 3 ~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~----- 77 (372)
T PRK07515 3 VVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDP----- 77 (372)
T ss_pred cEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcc-----
Confidence 6899999999999999999988753110 000000000 12578999999999999864211100
Q ss_pred cCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccc
Q 044410 92 CYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQG 170 (402)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~ 170 (402)
....+.+++|...+.....+|+.+|+++||+++|++++|||.||++++++ +..|+.+..|++.||++. + +++++++
T Consensus 78 ~~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~~-~--~~~v~~a 154 (372)
T PRK07515 78 DRMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEG-F--AFDMNVA 154 (372)
T ss_pred cccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCCC-c--EEEecch
Confidence 11234445555444456789999999999999999999999999998887 788999999999999973 3 7899999
Q ss_pred cchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEee
Q 044410 171 CYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSC 250 (402)
Q Consensus 171 C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~ 250 (402)
|+|++.||.+|.++|++|..++||||++|+++..+ ++.+ +...++|||||+|+||++.+. .. ....+++.+.
T Consensus 155 Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~d-----~~~~~lfGDgAaA~vL~~~~~-~~-~~~~~~il~~ 226 (372)
T PRK07515 155 CSSATFGIQTAANAIRSGSARRVLVVNPEICSGHL-NFRD-----RDSHFIFGDVATAVIVERADT-AT-SAGGFEILGT 226 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccc-cccC-----CCCCEEecCccEEEEEeeccc-cc-cCCCceEEEE
Confidence 99999999999999999999999999999998633 3332 224689999999999998654 21 0012233222
Q ss_pred ee-----eecCCCccc-cc---ceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHH
Q 044410 251 TQ-----TTVPDTENY-IS---GQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD 319 (402)
Q Consensus 251 ~~-----~~~p~~~~~-~~---~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~ 319 (402)
.. ..++...+. .. .........+.+ ++.+++.+...++++|+++|+++|+++ +|| +|++||+|.++++
T Consensus 227 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~-~dId~~~~Hq~~~~~~d 305 (372)
T PRK07515 227 RLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTP-ADVKRFWLHQANINMNQ 305 (372)
T ss_pred EeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHH
Confidence 11 111100000 00 001111123343 778899999999999999999999997 999 9999999999999
Q ss_pred HHHHH-cCC--CccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410 320 QVEKT-LGL--RKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 320 ~~~~~-lgi--~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
.+.+. ||+ +.++.+. ++++||||+|||+|++|+++. +++++| |+|++++||+|++|+++|||.
T Consensus 306 ~~~~~llg~~~~~~~~~~---~~~~~GNt~sasi~~~L~~~~------~~~~~G---d~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 306 LIGKKVLGRDATPEEAPV---ILDEYANTSSAGSIIAFHKHS------DDLAAG---DLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred HHHHHhccCCCChhhceE---eHHhcCCchhhHHHHHHHHHh------ccCCCC---CEEEEEEecccHHHHHHHhcc
Confidence 99988 564 5566655 499999999999999999874 447889 999999999999999999985
No 29
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.8e-44 Score=355.37 Aligned_cols=347 Identities=20% Similarity=0.324 Sum_probs=269.8
Q ss_pred CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCCh
Q 044410 21 GPTATILAIGTSTPPN--CFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSL 98 (402)
Q Consensus 21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 98 (402)
+| +|++..++|.|+. +++.+.+.+.......-+ ++..+...+|.+++||.+..+..+.- +...| .|++
T Consensus 58 ~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~s~~F~~~i~~rSGlg~et~~p~~~-~~~~~------~~~~ 127 (466)
T PLN00415 58 KP-VYLVDFSCHQPTDSCKISSETFFNMAKGAQLYT--EETIQFMTRILNRSGLGDDTYSPRCM-LTSPP------TPSM 127 (466)
T ss_pred Cc-EEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHHcCCCCCeeeCCcc-ccCCC------CCCh
Confidence 57 9999999999876 688888888764322211 34456678899999998876654322 11111 1222
Q ss_pred HHHHHHHHhhHHHHHHH-HHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeecc-ccchHH
Q 044410 99 DARQAMLIDEVPKLGKE-AALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQ-GCYMGG 175 (402)
Q Consensus 99 ~~~~~~~~~~~~~la~~-Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~-~C~~~~ 175 (402)
.+ .+...+|+.. |+++||+++|++|+|||+||+ ++++ +..|+++.+|+++||++++.. .+++++ ||+|++
T Consensus 128 ~~-----~~~e~em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGLr~~v~-~~dL~gmGCsggv 200 (466)
T PLN00415 128 YE-----ARHESELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKLKTDVK-TYNLSGMGCSAGA 200 (466)
T ss_pred hh-----hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCCCCCce-EEEeccccchHHH
Confidence 11 1235566665 778999999999999999985 5678 589999999999999996654 788885 999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeec
Q 044410 176 TVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTV 255 (402)
Q Consensus 176 ~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~ 255 (402)
.||++|++++++++.++||||++|.+|..++++.+ +...+..++|||||+|+||++++. .. ..+.+++......+.
T Consensus 201 ~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~d--r~~lv~n~LFgDGAAAvlLs~~~~-~~-~~~~~~L~~~vrt~~ 276 (466)
T PLN00415 201 ISVDLATNLLKANPNTYAVIVSTENMTLSMYRGND--RSMLVPNCLFRVGGAAVMLSNRSQ-DR-VRSKYELTHIVRTHK 276 (466)
T ss_pred HHHHHHHHHHHhCCCCEEEEEEEecccccccCCCc--HhHhccceeecccceEEEEecCcc-cc-cCccceeeeEEEecC
Confidence 99999999999999999999999999976644433 455556789999999999998654 21 123565544434444
Q ss_pred CCCccccc---ceeecCce-EEEeCCchhHHHHHhHHHHHHHhhccCC----------------------CCC----Cc-
Q 044410 256 PDTENYIS---GQLKEMGT-YCHLSRDVPVAIGNYVDKCLSNAMSPIG----------------------ISD----WN- 304 (402)
Q Consensus 256 p~~~~~~~---~~~~~~g~-~~~~~~~v~~~~~~~~~~~i~~~L~~~g----------------------l~~----~~- 304 (402)
|.+++.+. |..+++|+ .+.++++++..+.+.+...+..+ .... +++ ++
T Consensus 277 ~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l-~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~ 355 (466)
T PLN00415 277 GSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTAL-GPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKL 355 (466)
T ss_pred CCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHh-hhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccc
Confidence 77776666 66777787 88899999999888877666553 2222 221 12
Q ss_pred ce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcc
Q 044410 305 SL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGP 383 (402)
Q Consensus 305 di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~ 383 (402)
.+ +|++|++++++++.+++.||++++++..+|+++++||||+|+|+++.|++..++ ++.++| |++++++||+
T Consensus 356 ~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~----~~~~~G---drvl~iaFGp 428 (466)
T PLN00415 356 CFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAK----CRVKRG---DRVWQLAFGS 428 (466)
T ss_pred cceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhh----ccCCCC---CEEEEEEEcC
Confidence 15 899999999999999999999999999999999999999999999999999877 888999 9999999999
Q ss_pred cccceeeEEeeec
Q 044410 384 GLTVETVVLQSVS 396 (402)
Q Consensus 384 G~~~~~~ll~~~~ 396 (402)
|+++.++|||+..
T Consensus 429 Gf~~es~v~~~~~ 441 (466)
T PLN00415 429 GFKCNSIVWRALR 441 (466)
T ss_pred cchhhHhHHHHhc
Confidence 9999999999865
No 30
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=3.4e-43 Score=341.58 Aligned_cols=307 Identities=27% Similarity=0.353 Sum_probs=248.3
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|+|+|+++++|+++++.+. . .++...+||++|++..+++
T Consensus 2 v~I~~i~~~lP~~~v~~~~~~~~~~----~----------~~~~~~~gi~~r~~~~~~~--------------------- 46 (324)
T cd00827 2 VGIEAIGAYLPRYRVDNEELAEGLG----V----------DPGKYTTGIGQRHMAGDDE--------------------- 46 (324)
T ss_pred ccEEEEEecCCceeecHHHHHHHhC----C----------CcceeeeecceeEecCCCC---------------------
Confidence 6899999999999999999988642 1 2677889999999987644
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+..+|+.+|++++|+++|++++|||.||++++++ ...|+.+.+|+..||++..+ .++++++|+|++.||.+|.
T Consensus 47 ----~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~~~~--~~~v~~~C~s~~~al~~A~ 120 (324)
T cd00827 47 ----DVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTNAE--AFDLKQACYGGTAALQLAA 120 (324)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCCCCc--eeehhhhhHHHHHHHHHHH
Confidence 3899999999999999999999999999999888 56889999999999998544 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCc---
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTE--- 259 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~--- 259 (402)
++|++|..++|||+++|.++.... .. ....++|||||+|+||++.+. .. ...+........+...
T Consensus 121 ~~i~~g~~~~vlvv~~e~~~~~~~-~~------~~~~~~~gdgaaA~ll~~~~~-~~----~~~i~~~~~~~~~~~~~~~ 188 (324)
T cd00827 121 NLVESGPWRYALVVASDIASYLLD-EG------SALEPTLGDGAAAMLVSRNPG-IL----AAGIVSTHSTSDPGYDFSP 188 (324)
T ss_pred HHHHcCCCCEEEEEEEHHhhhccc-CC------CCccccccCceEEEEEecCcc-cc----cCCceeeeeecccccccCc
Confidence 999999999999999999986331 11 124689999999999998765 10 1122211111122111
Q ss_pred -ccccceee-----cCceEEEeC---CchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCH-HHHHHHHHHcCCC
Q 044410 260 -NYISGQLK-----EMGTYCHLS---RDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGD-GLLDQVEKTLGLR 328 (402)
Q Consensus 260 -~~~~~~~~-----~~g~~~~~~---~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~-~~~~~~~~~lgi~ 328 (402)
..+..... .....+.+. ++++..+...++++++++|++.|++ ++| +|++||+|. .+++.++++|+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i~~~~~h~~~~~~~~~~~~~~l~~~ 266 (324)
T cd00827 189 YPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS--EDIDYFVPHQPNGKKILEAVAKKLGGP 266 (324)
T ss_pred cceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc--cccceeeccCchHHHHHHHHHHHccch
Confidence 01111000 011234443 4788888999999999999999988 678 999999999 9999999999999
Q ss_pred ccccHHHHH-HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEE
Q 044410 329 KEKLWASRY-VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL 392 (402)
Q Consensus 329 ~ek~~~~~~-~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll 392 (402)
++++..++. ++++|||+++||+|++|++++++ +++++| |+|+++++|+|++|+++++
T Consensus 267 ~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~----~~~~~G---d~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 267 PEKASQTRWILLRRVGNMYAASILLGLASLLES----GKLKAG---DRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred HhhhccchhhHHHHhCchHHHHHHHHHHHHHhc----CCCCCC---CEEEEEEeccchhheeccC
Confidence 888886543 69999999999999999999998 889999 9999999999999998764
No 31
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=2.3e-40 Score=327.40 Aligned_cols=304 Identities=22% Similarity=0.199 Sum_probs=237.8
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|+|+|+++++++++++..+ .. .+|+...+|+++|++..++|
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g---~~---------~~~~~~g~G~~~~~~~~~~e--------------------- 47 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARG---VD---------PEKFHIGIGQKKMAVPPIDE--------------------- 47 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhC---CC---------HHHHHhhcCceEEeeCCCCC---------------------
Confidence 4799999999999999999998642 11 36888999999999987766
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+..+|+++|+++||+++ ++++||+|+++|+++ +..|+.+..|++.||+++.+. ++++.++|+|++.||++|.
T Consensus 48 ----d~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~-~~dv~~aC~gg~~aL~~A~ 120 (379)
T TIGR01835 48 ----DIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCR-SFELKQACYGATAALQMAK 120 (379)
T ss_pred ----CHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCce-EEEeccccHHHHHHHHHHH
Confidence 37999999999999998 899999999999999 778999999999999986543 8899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI 262 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 262 (402)
++|++|+.++||||++|..... +.+ ....+|||||+|+||++++. .+.+...... . +++.+
T Consensus 121 ~~i~s~~~~~aLVv~~D~a~~~---~~~------~~~~~~GdGA~A~Ll~~~~~-------i~~~~~~~~~-~--t~~~~ 181 (379)
T TIGR01835 121 GHVALSPDRKVLVIASDIAKYG---LES------PGEPTQGAGAVAMLVSADPK-------LLAINEDSVL-Y--TDDIM 181 (379)
T ss_pred HHHHcCCCCeEEEEEeehhhcc---cCC------CCCccccCccEEEEEecCCC-------eeEEecccee-e--ecCCC
Confidence 9999999999999999996531 111 12468999999999998654 1222110000 0 11111
Q ss_pred cceeecCce--EEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHH----HHHHHHHcCCCc-cccH-
Q 044410 263 SGQLKEMGT--YCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGL----LDQVEKTLGLRK-EKLW- 333 (402)
Q Consensus 263 ~~~~~~~g~--~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~----~~~~~~~lgi~~-ek~~- 333 (402)
++. ++.+. ....++.....+.+.++++++++|+++|+++ +|+ +|++||++.++ ++.+.+.++++. +++.
T Consensus 182 df~-~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~-~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~ 259 (379)
T TIGR01835 182 DFW-RPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSL-ADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQN 259 (379)
T ss_pred Ccc-CCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCH-HHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHH
Confidence 111 11111 1223566677788899999999999999997 999 99999998777 344666777773 3333
Q ss_pred ---HHHHHHHhcCCCCcchHHHHHHHHHHhhhhhh-cccCCCCCceEEEEEEcccccceeeEEeee
Q 044410 334 ---ASRYVLREYGNMGAPSVFFILDEVRKKSIEEM-KATTGEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 334 ---~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g-~i~~G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
.++.+.+++|||++||+|++|..+++. + ++++| |+|+|+++|+|++.....++..
T Consensus 260 ~~~~s~~~~~~~GN~~sas~~l~L~~~l~~----~~~~~~G---d~ill~s~GsG~~ae~~~~~~~ 318 (379)
T TIGR01835 260 AYLESIIYNREVGNLYTGSLYLGLASLLEN----AFEDTTG---DKIGLFSYGSGAVAEFFSGTLV 318 (379)
T ss_pred HhhhhhhhhhhcCchHhHHHHHHHHHHHHh----cccCCCC---CEEEEEEecCCcceeeEEEEEc
Confidence 233468999999999999999999986 5 68899 9999999999999887777653
No 32
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=100.00 E-value=6.2e-39 Score=289.72 Aligned_cols=222 Identities=45% Similarity=0.748 Sum_probs=190.7
Q ss_pred cccccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCcc
Q 044410 13 MTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCC 92 (402)
Q Consensus 13 ~~~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~ 92 (402)
|.+.++.+++ .+|.|||+.+|+++++|+++.+.+.+....++..+.+++..++++++||++||+..|.+.+..+|.+..
T Consensus 5 ~~~~~~~~g~-A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~ 83 (226)
T PF00195_consen 5 MRRAQRSPGP-AYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWD 83 (226)
T ss_dssp HHHHHS-SSS-EEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHS
T ss_pred HhhcccCCCC-eEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhh
Confidence 5556677788 999999999999999999999987665555554566778889999999999999999888888888877
Q ss_pred CCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccc
Q 044410 93 YEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCY 172 (402)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~ 172 (402)
...|++++|++.|.+.+.+|+.+|+++||+++|++++|||+||++|||++..|++..+|.++|||++.+.|.....+||+
T Consensus 84 ~~~ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~ 163 (226)
T PF00195_consen 84 FADPSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCA 163 (226)
T ss_dssp SSSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGG
T ss_pred ccCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCC
Q 044410 173 MGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADS 235 (402)
Q Consensus 173 ~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~ 235 (402)
+++.+|+.|..+.++++..+||||++|.+|.+|+.|.+.++++.+...+|||||+|+||+.+|
T Consensus 164 gg~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 164 GGAAGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred hHHHHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 999999999999999999999999999999888756566688899999999999999999875
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=1.3e-36 Score=302.77 Aligned_cols=303 Identities=17% Similarity=0.191 Sum_probs=232.1
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeeccc--chhHhhhCCCCccCCCCChHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL--TEEILKENPNMCCYEAPSLDAR 101 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~--~~~~~~~~~~~~~~~~~~~~~~ 101 (402)
++|.++|.|+|+++++|+++++.++ .+ .+|+ .+||.+|+++. ++|
T Consensus 5 vgI~gig~Y~P~~~v~n~eLa~~~g---~~---------~~~~--~~GI~~r~~ava~~~E------------------- 51 (459)
T PLN02577 5 VGILAMEVYFPPTCVQQEALEAHDG---VS---------KGKY--TIGLGQDCMAFCTDVE------------------- 51 (459)
T ss_pred cEEEEEEEeCCCeEEcHHHHHHHhC---CC---------HHHH--hhccceeEeccCCCCC-------------------
Confidence 8999999999999999999988752 22 2565 68999999754 444
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHH---HHcCCCCccccceeeccccchHHHH
Q 044410 102 QAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLM---RLLGLKPSVNRLMIYTQGCYMGGTV 177 (402)
Q Consensus 102 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~---~~LGl~~~~~~~~~i~~~C~~~~~a 177 (402)
++.+||++|++++|+++|+++++||+||++|.++ +..|+++..|+ +.||.+... ++|++.+|.|++.|
T Consensus 52 ------d~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~~~~--afDi~~AC~G~~~A 123 (459)
T PLN02577 52 ------DVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNTDIE--GVDSTNACYGGTAA 123 (459)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCCCcE--EeehhhhhHHHHHH
Confidence 4899999999999999999999999999999999 88999998885 677877653 89999999999999
Q ss_pred HHHHHHHHHcCC--CCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEE--Eeeeee
Q 044410 178 IRLAKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQI--LSCTQT 253 (402)
Q Consensus 178 l~~A~~~i~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~--~~~~~~ 253 (402)
|.+|.++|++|. .++||||++|..+... +|. ..++||||+|+||+.++. . .+.. .+.++
T Consensus 124 L~~A~~~i~sg~~~~~~aLVV~aD~a~~~~-~~~---------e~t~GdGA~A~lv~~~~~-~-----~l~~~~~g~~~- 186 (459)
T PLN02577 124 LLNCVNWVESSSWDGRYGLVVAADSAVYAE-GPA---------RPTGGAGAVAMLVGPNAP-I-----VFESKYRGSHM- 186 (459)
T ss_pred HHHHHHHHHcCCCCCCeEEEEEechhhccC-CCC---------CCCCCcceEEEEEccCCC-c-----eeecccccccC-
Confidence 999999999986 5999999999988532 232 245699999999997543 1 1111 11111
Q ss_pred ecCCCccccc-ceeecC-ceEEEeCCchhHHHHHhHHHHHHHhhccC------CCCCCcce-EEEEcCCCHHHHHHHHHH
Q 044410 254 TVPDTENYIS-GQLKEM-GTYCHLSRDVPVAIGNYVDKCLSNAMSPI------GISDWNSL-FYVVHPGGDGLLDQVEKT 324 (402)
Q Consensus 254 ~~p~~~~~~~-~~~~~~-g~~~~~~~~v~~~~~~~~~~~i~~~L~~~------gl~~~~di-~~i~H~~~~~~~~~~~~~ 324 (402)
.+.++ |..... .+.+.-|+.++.++.+.++.++++++++. |++. +|+ ++++||+..+|..+..++
T Consensus 187 -----~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~-~d~d~~vfHqP~~km~~ka~~~ 260 (459)
T PLN02577 187 -----AHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSI-SDADYFVFHAPYNKLVQKSFAR 260 (459)
T ss_pred -----cccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCH-HHcCEEEecCCccchhHHHHHH
Confidence 11111 111111 11233388999999999999999998877 7886 999 999999998887776655
Q ss_pred cCCC----------------------------------------------ccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410 325 LGLR----------------------------------------------KEKLWASRYVLREYGNMGAPSVFFILDEVR 358 (402)
Q Consensus 325 lgi~----------------------------------------------~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~ 358 (402)
|.+. .+|+..+...-+++||++++|+++.|..++
T Consensus 261 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YTaSlyl~L~SlL 340 (459)
T PLN02577 261 LVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALASLV 340 (459)
T ss_pred HhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCcccchHHHHHHHHHH
Confidence 5411 022333333567899999999999999999
Q ss_pred HhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410 359 KKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS 396 (402)
Q Consensus 359 ~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~ 396 (402)
+.. ....+| ++|+++|+|+|......-+++.+
T Consensus 341 ~~~---~~~~~G---~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 341 HNK---HSELAG---KRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred hhc---cccCCC---CEEEEEeecCCccceeEEEEEeC
Confidence 751 113378 99999999999998888777654
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=6.3e-35 Score=277.97 Aligned_cols=305 Identities=20% Similarity=0.226 Sum_probs=245.2
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++|.|+|.++++.+|+++..+ - ..+++.+.+|+++|.++..+|.
T Consensus 3 iGI~~~g~y~p~~~i~~~ela~~~g----~--------d~~k~~~gl~~~e~sv~~~~ED-------------------- 50 (377)
T COG3425 3 IGIVGIGAYIPRYRIKLEELARAWG----V--------DPEKIKKGLGVEEKSVPPWDED-------------------- 50 (377)
T ss_pred cccceEEEeccceEeeHHHHHhhcC----C--------ChHHhhhccccccccCCCCchh--------------------
Confidence 7899999999999999999988632 1 1367888999999999988773
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
+..||++|++++|+++++|+++|+.|+++|.++ +...+.+..|++.||+++... ++++..+|-++..||+.|.
T Consensus 51 -----~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~-~~d~~~AC~agT~aL~~a~ 124 (377)
T COG3425 51 -----AVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSAR-AADVEFACYAGTAALQAAI 124 (377)
T ss_pred -----HHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCcee-hhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 888999999999999998864 9999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee--cCCCcc
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT--VPDTEN 260 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~ 260 (402)
.++.+|+.+++|||++|+.... |.+ ....+.|+||+|+||++++. . ...+...++.+ .|+.
T Consensus 125 ~~v~s~~~~~~LvI~sD~a~~~---~~~------~~E~t~GAGavA~lIg~n~~-~-----~a~~~~~~syt~d~~DF-- 187 (377)
T COG3425 125 GWVESGMISYGLVIGADTAQYA---PGD------ALEYTAGAGAVAFLIGKNPP-I-----VAEFEGTGSYTTDTPDF-- 187 (377)
T ss_pred HHHHcCCccceEEEeehhhccC---CCc------ccCccCCCceEEEEEccCCC-e-----EEEecCceEEecCCCcc--
Confidence 9999999999999999998642 221 13467999999999999744 1 12222222221 1111
Q ss_pred cccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHH
Q 044410 261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVL 339 (402)
Q Consensus 261 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l 339 (402)
|+....-+-..-++..-..+.+++..++++++++.|+++ +|+ ++++|+++.++....++.++...+++..+....
T Consensus 188 ---wRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~-~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~ 263 (377)
T COG3425 188 ---WRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSP-DDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYP 263 (377)
T ss_pred ---cccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCCh-hhhCeEEecCCCCchHHHHHHHhCccHhhcCccchhh
Confidence 211100000111222234567888999999999999997 999 999999999999999999999988888775445
Q ss_pred HhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410 340 REYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 340 ~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
++.||++++|+++.|..+++. .+ .+| |+|++++||+|......-++..
T Consensus 264 ~~vGN~YtgS~~L~Las~L~~----a~-~~G---~rIl~~SYGSGa~s~~fs~~v~ 311 (377)
T COG3425 264 QRIGNTYTGSLLLGLASLLDN----AK-LPG---DRILLFSYGSGAGSEAFSITVT 311 (377)
T ss_pred hhcCcccchhHHHHHHHHHhh----cC-CCC---CEEEEEeeCCCcceeEEEEEec
Confidence 689999999999999999997 33 588 9999999999987666555543
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=1.6e-32 Score=273.12 Aligned_cols=310 Identities=20% Similarity=0.178 Sum_probs=210.9
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeec--ccchhHhhhCCCCccCCCCChHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYF--HLTEEILKENPNMCCYEAPSLDAR 101 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~--~~~~~~~~~~~~~~~~~~~~~~~~ 101 (402)
++|.++|.|+|+++++|+++++..+ . + ..|+ .+||.+|++ +.++|
T Consensus 2 vgI~~ig~y~P~~~v~~~eLa~~~g---~-~--------~~k~--~~GI~~rr~av~~~~E------------------- 48 (454)
T TIGR01833 2 VGILALEIYFPSQYVDQAELEKYDG---V-S--------AGKY--TIGLGQTKMGFCTDRE------------------- 48 (454)
T ss_pred cEEEEEEEeCCCeEEcHHHHHHhcC---C-C--------HHHh--eechhheecccCCCCC-------------------
Confidence 6899999999999999999987642 1 1 2455 599999994 55555
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHc---CCCCccccceeeccccchHHHH
Q 044410 102 QAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLL---GLKPSVNRLMIYTQGCYMGGTV 177 (402)
Q Consensus 102 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~L---Gl~~~~~~~~~i~~~C~~~~~a 177 (402)
+..+|+..|++++|+++++++++||+||++|.++ +..|+.+..|++.| |.+... ++++.++|+|++.|
T Consensus 49 ------d~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~--~fDi~~AC~G~t~A 120 (454)
T TIGR01833 49 ------DINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVE--GIDTTNACYGGTAA 120 (454)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCce--EEeccccchhHHHH
Confidence 4899999999999999999999999999999999 89999999999855 455443 89999999999999
Q ss_pred HHHHHHHHHcCC--CCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCC--CceEEEeeeee
Q 044410 178 IRLAKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHES--PLFQILSCTQT 253 (402)
Q Consensus 178 l~~A~~~i~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~--~~~~~~~~~~~ 253 (402)
|.+|.++|+++. .++||||++|+.-. . +. ....++||||+|+||++++. ..+.. ....+....-.
T Consensus 121 L~~A~~~i~s~~~~~~~aLVV~sDia~y--~-~~-------~~~~t~GaGAvAmLv~~~~~-~~~~~~~~~~~~~~~~DF 189 (454)
T TIGR01833 121 LFNAINWIESSSWDGRYALVVAGDIAVY--A-KG-------NARPTGGAGAVAMLIGPNAP-IVFERGLRGSHMQHAYDF 189 (454)
T ss_pred HHHHHHHHHcCCcCCCeEEEEEeccccc--c-CC-------CeeeccccceEEEEeccCcc-ceecCccceEEEeecccc
Confidence 999999999985 59999999999442 1 11 12457899999999998765 21111 01111110001
Q ss_pred ecCCCcccccceeecCceEEEeCCchh--------HHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHH-
Q 044410 254 TVPDTENYISGQLKEMGTYCHLSRDVP--------VAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEK- 323 (402)
Q Consensus 254 ~~p~~~~~~~~~~~~~g~~~~~~~~v~--------~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~- 323 (402)
.-|...... ..-+| .++-+.+ ....+.+..+++.+..+.++.+ +|+ +++||++..+|..+...
T Consensus 190 ~rP~~~~~~---p~vdg---~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~-~dfd~~~fH~P~~km~~ka~~~ 262 (454)
T TIGR01833 190 YKPDLASEY---PVVDG---KLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL-NDFDYMVFHSPYCKLVQKSLAR 262 (454)
T ss_pred cCCCCCCcc---cccCC---ccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH-hHcCEEeccCCcccHHHHHHHH
Confidence 112211100 00011 0111111 1111112222222333345775 888 99999998887665422
Q ss_pred Hc----C-----------------------------------------CCccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410 324 TL----G-----------------------------------------LRKEKLWASRYVLREYGNMGAPSVFFILDEVR 358 (402)
Q Consensus 324 ~l----g-----------------------------------------i~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~ 358 (402)
.| . ...+|+..+...-++.||++++|+++.|..++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl~L~Sll 342 (454)
T TIGR01833 263 LLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTASLYGCLASLL 342 (454)
T ss_pred HHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhHHHHHHHHHH
Confidence 22 1 01133333322345899999999999999999
Q ss_pred HhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410 359 KKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST 397 (402)
Q Consensus 359 ~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~ 397 (402)
+... .....| ++|+|+++|+|.......+++.+.
T Consensus 343 ~~~~--~~~~~g---~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 343 SSKS--AQELAG---KRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred hhCC--ccccCC---CEEEEEeccCCcceeeEEEEEeCC
Confidence 7511 113468 999999999999988888887654
No 36
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.97 E-value=9.3e-30 Score=238.56 Aligned_cols=236 Identities=28% Similarity=0.343 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~ 187 (402)
..+|+.+|++++|+++|++++|||.|+++++++ +..|+.+.+|+..+|+++.+ .+++..+|++++.||++|..+|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~--~~~i~~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGP--AYSVNQACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCC--cceeccHhHHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999999998 66899999999999996333 789999999999999999999999
Q ss_pred CCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCccccccee
Q 044410 188 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQL 266 (402)
Q Consensus 188 g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~ 266 (402)
|..+++||+++|. ++|||||+|+||++.+.... ...+..++.+......+...
T Consensus 85 g~~~~~lv~~~e~-------------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~------- 138 (254)
T cd00327 85 GKADIVLAGGSEE-------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM------- 138 (254)
T ss_pred CCCCEEEEEecce-------------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCC-------
Confidence 9999999999988 36899999999998653110 01122344432221111100
Q ss_pred ecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccH--HHHHHHHhcC
Q 044410 267 KEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLW--ASRYVLREYG 343 (402)
Q Consensus 267 ~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~--~~~~~l~~~G 343 (402)
.+....+.+.++++++|+++|+++ +|+ +|++|+.+..+++.+++.++++.++.. ....+..+||
T Consensus 139 ------------~~~~~~~~~~~~i~~~l~~ag~~~-~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 205 (254)
T cd00327 139 ------------VPAVSGEGLARAARKALEGAGLTP-SDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTG 205 (254)
T ss_pred ------------CCCCChHHHHHHHHHHHHHcCCCH-HHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccc
Confidence 011124456788999999999997 999 999999999999999999998877762 0012588999
Q ss_pred CCCcchHHHHHHHHHHhhhhhhccc-------CCCCCceEEEEEEcccccceeeEE
Q 044410 344 NMGAPSVFFILDEVRKKSIEEMKAT-------TGEGLECGVLFGFGPGLTVETVVL 392 (402)
Q Consensus 344 n~~sasi~i~L~~~~~~~~~~g~i~-------~G~~~d~vll~~~G~G~~~~~~ll 392 (402)
|+++||.++.|.++++. .+.+ +| ++++++++|.|++++++++
T Consensus 206 ~~~~as~~~~l~~~~~~----~~~~~~~~~~~~~---~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 206 HPLGAAGLAILDELLLM----LEHEFIPPTPREP---RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred cchHHHHHHHHHHHHHH----HhCCCcCCCCCCc---CEEEEeeEcCCCcceEEEC
Confidence 99999999999999886 4444 56 9999999999999999875
No 37
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.95 E-value=8e-28 Score=234.33 Aligned_cols=254 Identities=23% Similarity=0.226 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHHHcCCC----CCCccEEEEEecCC-CC---------------------CCCHHHHHHHHcCCCCccc
Q 044410 109 VPKLGKEAALKAIKEWGQP----VSKITHLIFSAFYG-VD---------------------MPGADVRLMRLLGLKPSVN 162 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~----~~dId~li~~s~~~-~~---------------------~p~~a~~i~~~LGl~~~~~ 162 (402)
..+|+.+|+++||+++|++ +++||.||++++++ +. .|+.+.+|+..||++. +
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g-~- 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHG-P- 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCC-C-
Confidence 6789999999999999999 99999999988876 43 6788999999999954 3
Q ss_pred cceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCC----------CCc--cchhhhhhhhhhccCcEEEE
Q 044410 163 RLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHE----------PSE--THLDVLVVQAVFGDGAGAAI 230 (402)
Q Consensus 163 ~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~----------~~~--~~~~~~~~~~lfGDGAaA~v 230 (402)
.+++..+|++++.||++|.++|++|..+++||+++|..+..+.. |+. ...++....++|||||+|+|
T Consensus 89 -~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 -AYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred -ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 67889999999999999999999999999999999987642211 000 00011235779999999999
Q ss_pred EccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EE
Q 044410 231 IGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FY 308 (402)
Q Consensus 231 L~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~ 308 (402)
|++.+... ........+.+.+....+... ..+....+.+.++++++|+++|+++ +|| ++
T Consensus 168 L~~~~~a~~~~~~~~~~i~~~~~~~~~~~~------------------~~~~~~~~~~~~~i~~al~~agl~~-~did~~ 228 (332)
T cd00825 168 VEELEHALARGAHIYAEIVGTAATIDGAGM------------------GAFAPSAEGLARAAKEALAVAGLTV-WDIDYL 228 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEEEEEccCCCCC------------------CCCCcCHHHHHHHHHHHHHHcCCCH-hHCCEE
Confidence 99755311 001112344433222111110 0011123456788999999999997 999 99
Q ss_pred EEcCCCHHHHHHHHHHcCCCcccc---HHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc-----------------
Q 044410 309 VVHPGGDGLLDQVEKTLGLRKEKL---WASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT----------------- 368 (402)
Q Consensus 309 i~H~~~~~~~~~~~~~lgi~~ek~---~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~----------------- 368 (402)
++|+.+..+.+.+++.++.+.++. .. +.+..+|||+++|+.++.|..+++. .+.+
T Consensus 229 ~~h~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~G~~~aas~~~~l~~~~~~----~~~~~~p~~~~~~~~~~~~~~ 303 (332)
T cd00825 229 VAHGTGTPIGDVKELKLLRSEFGDKSPAV-SATKAMTGNLSSAAVVLAVDEAVLM----LEHGFIPPSIHIEELDEAGLN 303 (332)
T ss_pred EccCCCCCCCCHHHHHHHHHHhCCCCcee-ECCCcccccchhHhHHHHHHHHHHH----HhcCccCCCCCCCCCCcccCc
Confidence 999999999999988887765541 11 1257899999999999999999875 3333
Q ss_pred --------CCCCCceEEEEEEcccccceeeEE
Q 044410 369 --------TGEGLECGVLFGFGPGLTVETVVL 392 (402)
Q Consensus 369 --------~G~~~d~vll~~~G~G~~~~~~ll 392 (402)
+| ++++++++|.|.++++++|
T Consensus 304 ~~~~~~~~~~---~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 304 IVTETTPREL---RTALLNGFGLGGTNATLVL 332 (332)
T ss_pred ccCCCCCCCC---CEEEEeeecCCCeeEEEeC
Confidence 45 9999999999999999885
No 38
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.95 E-value=7.1e-26 Score=210.06 Aligned_cols=255 Identities=17% Similarity=0.235 Sum_probs=197.9
Q ss_pred CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCCh
Q 044410 21 GPTATILAIGTSTPPN--CFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSL 98 (402)
Q Consensus 21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 98 (402)
+| +|++..++|.|+. +++.+.+.+.+.....- .++..+...+|.+++||.++.+..+ .... ...
T Consensus 7 r~-VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f--~~~sl~F~~kIlerSGlG~eTy~P~-~~~~----------~p~ 72 (290)
T PF08392_consen 7 RP-VYLVDFACYKPPDELRVSREEFIEHARRCGRF--DEESLDFQRKILERSGLGDETYLPP-ALHE----------IPP 72 (290)
T ss_pred CC-EEEEeeeecCCCcccccCHHHHHHHHHhcccC--ChhHHHHHHHHHHhcCCCccccCCc-cccc----------CCC
Confidence 57 9999999999876 58889988876532221 1344567788999999999999743 3211 112
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee-eccccchHHHH
Q 044410 99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI-YTQGCYMGGTV 177 (402)
Q Consensus 99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~-i~~~C~~~~~a 177 (402)
+..+....+.+..++..|++++|+++|++|+|||.||+.++++...|+++.+|.+++|++.+.. .++ .++||++++.+
T Consensus 73 ~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~-~~nLsGMGCsAglia 151 (290)
T PF08392_consen 73 DPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIK-SYNLSGMGCSAGLIA 151 (290)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCee-eecccCCcchhhHHH
Confidence 3456666777888999999999999999999999999999888999999999999999999876 555 57799999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCC
Q 044410 178 IRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPD 257 (402)
Q Consensus 178 l~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~ 257 (402)
|++|+++++..+..++|||++|.++..++. .++++...+.++|+|||+|+||++.+. .. ....+++.....++...
T Consensus 152 i~lA~~lL~~~p~~~ALVVstE~~s~~~Y~--G~~rsmlv~NcLFr~GgAAvLLSn~~~-~~-~~aky~L~~~vRt~~g~ 227 (290)
T PF08392_consen 152 IDLAKDLLQAHPNSYALVVSTENISANWYR--GNDRSMLVSNCLFRMGGAAVLLSNKPS-DR-RRAKYELLHTVRTHTGA 227 (290)
T ss_pred HHHHHHHHHhCCCcEEEEEEEeeccccccc--CCcHHHhhccccccCCceeEEeecCcc-cc-ccchhhhhheeeeecCC
Confidence 999999999999999999999999976643 345777889999999999999999876 22 23457776655555555
Q ss_pred Ccccccce---eecCc-eEEEeCCchhHHHHHhHHHHHHHh
Q 044410 258 TENYISGQ---LKEMG-TYCHLSRDVPVAIGNYVDKCLSNA 294 (402)
Q Consensus 258 ~~~~~~~~---~~~~g-~~~~~~~~v~~~~~~~~~~~i~~~ 294 (402)
.++.+..- .+++| ..+.+++++...+.+.+..-|..+
T Consensus 228 ~d~ay~~v~q~eD~~g~~Gv~lsk~l~~vag~al~~ni~~l 268 (290)
T PF08392_consen 228 DDDAYRCVFQEEDEEGIVGVSLSKDLMKVAGKALKANITTL 268 (290)
T ss_pred CCCceeeEEEeEcCCCceEEEEecchHHHHHHHHHHHHHHh
Confidence 55555422 22344 357789999998887776655543
No 39
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.94 E-value=2.2e-25 Score=190.80 Aligned_cols=149 Identities=43% Similarity=0.741 Sum_probs=127.1
Q ss_pred EEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHH
Q 044410 246 QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKT 324 (402)
Q Consensus 246 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~ 324 (402)
++++..+.++|++++.+.|++.+.|+.+.++++++..+.++++.+++++|++.|++. .++ +|++|+++++|++.+++.
T Consensus 1 el~~~~~~~iP~te~~m~~~i~~~Gf~~~Ls~~vP~~i~~~i~~~~~~~L~~~g~~~-~~~~~wavHPGG~~ILd~v~~~ 79 (151)
T PF02797_consen 1 ELVSTSSHLIPDTEDAMGWDIGDTGFHFILSKEVPDLISDNIPPFVEDLLARHGLSD-WDILFWAVHPGGRKILDAVEEA 79 (151)
T ss_dssp EEEEEEEEE-TT-TTSEEEEEETTEEEEEE-TTHHHHHHHHHHHHHHHHHHGGTCCS-GGGSEEEEE-SSHHHHHHHHHH
T ss_pred CceeccceEecCCcCceEEEEeCCeEEEEEhhHhHHHHHHHHHHHHHHHHhhhcccc-cccceeeecCChHHHHHHHHHH
Confidence 466777889999999999999999999999999999999999999999999999986 555 999999999999999999
Q ss_pred cCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410 325 LGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 325 lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
|+++++++..||++|++||||+|+++++.|++++++...+|....|++++++++++||+|+|..++|||..
T Consensus 80 L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 80 LGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 99999999999999999999999999999999988433335555544458999999999999999999964
No 40
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.87 E-value=5.2e-21 Score=187.37 Aligned_cols=280 Identities=14% Similarity=0.074 Sum_probs=194.3
Q ss_pred HHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcC-CCCCCccEEEEEec---
Q 044410 64 KRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWG-QPVSKITHLIFSAF--- 139 (402)
Q Consensus 64 ~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag-~~~~dId~li~~s~--- 139 (402)
+||..++|+.+|++.. .+ ...+|+..|++++|++++ +++++||++|..+.
T Consensus 46 ~~i~~~~~~~~~~~~~-~~-------------------------r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~ 99 (348)
T PRK06147 46 EWLIGAPVPLPPPWRG-PE-------------------------RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEER 99 (348)
T ss_pred CceEeecCcCCcccCc-hH-------------------------HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhc
Confidence 5788888998888853 33 278999999999999999 79999999888654
Q ss_pred --CC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----cC---CC
Q 044410 140 --YG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----FH---EP 208 (402)
Q Consensus 140 --~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----~~---~~ 208 (402)
.+ ...+.++..++.+||+.... +.+++..+|++++.||..|..+|++|..+.+||+++|..+.. |. .+
T Consensus 100 ~~~~~~~~~~~~~~~~~~lG~~~~~-~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l 178 (348)
T PRK06147 100 PGRPPDLEERLLRELEARLGLRLEP-GSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRL 178 (348)
T ss_pred CCCCcchHHHHHHHHHHHhCCCCCC-CcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhcc
Confidence 12 34456788999999995432 268999999999999999999999999999999999987641 10 01
Q ss_pred CccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHH
Q 044410 209 SETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVD 288 (402)
Q Consensus 209 ~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~ 288 (402)
... +....++|||||+++||++.+. .. ....+++..+....++. .+...+.. + ..+.+.
T Consensus 179 ~~~---~~~~G~v~GEGA~a~vLe~~~~-A~--~rga~i~a~g~~~~~~~------------~~~~~~~p-~--~g~gl~ 237 (348)
T PRK06147 179 LTS---QNSNGFIPGEAAAAVLLGRPAG-GE--APGLPLLGLGLGREPAP------------VGESEDLP-L--RGDGLT 237 (348)
T ss_pred CCC---CCCCceeeeceEEEEEEccHhh-hh--cCCCceEEEEEeecCCC------------cccCCCCC-C--ChHHHH
Confidence 000 1225789999999999998654 21 11223332111111110 00000000 0 134677
Q ss_pred HHHHHhhccCCCCCCcce-EEEEcCCCHHHHH-----HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhh
Q 044410 289 KCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD-----QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSI 362 (402)
Q Consensus 289 ~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~-----~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~ 362 (402)
++++++|+++|+++ ++| +++.|..+....+ .+.+.++-..+..+. +..-..+||+++|+-.+.+..++.. +
T Consensus 238 ~ai~~AL~~agl~~-~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~-~~~k~~~Gh~~aAaG~~~~~~a~~~-~ 314 (348)
T PRK06147 238 QAIRAALAEAGCGL-EDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDL-WHPAECIGEIGAAIGPALLGVALAA-S 314 (348)
T ss_pred HHHHHHHHHcCCCH-HHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCce-ecchHhhcchHHHHHHHHHHHHHHH-H
Confidence 89999999999997 999 9999987655433 234445543333322 1246789999999999988876643 1
Q ss_pred hhhcccCCCCCceEEEEEEcccccceeeEEeeeccC
Q 044410 363 EEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTN 398 (402)
Q Consensus 363 ~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~ 398 (402)
.+| .-+| +++|+++..-...-++++|+..+.|
T Consensus 315 ~~g-~~~g---~~~L~~s~~d~g~r~a~~l~~~~~~ 346 (348)
T PRK06147 315 RKG-YGPG---PNVLCHLSDDDGARAALVLEYRRGP 346 (348)
T ss_pred HcC-cCCC---CcEEEEecCCCCceEEEEEeccccC
Confidence 114 4457 7999999998888899999988876
No 41
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.86 E-value=9.2e-22 Score=154.92 Aligned_cols=89 Identities=28% Similarity=0.542 Sum_probs=78.1
Q ss_pred hccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCC
Q 044410 295 MSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGL 373 (402)
Q Consensus 295 L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~ 373 (402)
|+++|+++ +|| +|++||.|.++++.+++.+|+++++++.+ +++|||+++||+|++|++++++ |++++|
T Consensus 1 L~~~g~~~-~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~---~~~~Gn~~sa~~~~~L~~~~~~----g~~~~G--- 69 (90)
T PF08541_consen 1 LERAGLSP-DDIDHFIPHQASKKILDSIAKRLGIPPERFPDN---LAEYGNTGSASIPINLADALEE----GRIKPG--- 69 (90)
T ss_dssp HHHTT--G-GGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-T---HHHH-B-GGGHHHHHHHHHHHT----TSSCTT---
T ss_pred CccccCCH-HHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHH---HhccCcchhhhHHHHHHHHHHc----CCCCCC---
Confidence 67899997 999 99999999999999999999999999875 8999999999999999999998 899999
Q ss_pred ceEEEEEEcccccceeeEEee
Q 044410 374 ECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 374 d~vll~~~G~G~~~~~~ll~~ 394 (402)
|+|+++++|+|++|+++++||
T Consensus 70 d~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 70 DRVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEEEEEEEETTTEEEEEEEE-
T ss_pred CEEEEEEEEhhheeEEEEEEC
Confidence 999999999999999999998
No 42
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.83 E-value=5.6e-19 Score=166.31 Aligned_cols=250 Identities=16% Similarity=0.144 Sum_probs=166.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~ 187 (402)
+..+|+.+|+++||+++|++++|||++++++. +. .+..+..+++.||++ .++++++|+++..||.+|..+|++
T Consensus 49 Ae~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~-Q~~~As~vA~~LGIP-----~fdV~~ACSTf~~AL~lAa~lI~S 121 (327)
T TIGR02845 49 AERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN-QIITANFVARDLGIP-----FLGLYGACSTSMETLALGAMLVDG 121 (327)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC-cccHHHHHHHHhCCC-----EEEEeccCHHHHHHHHHHHHHHhC
Confidence 46799999999999999999999999998863 32 345689999999973 589999999999999999999999
Q ss_pred CCCCeEEEEEeccCcc---ccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccc
Q 044410 188 NPGARVLVVCSDIRVL---DFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISG 264 (402)
Q Consensus 188 g~~~~vLvv~~e~~s~---~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 264 (402)
|.+++|||++++..|. .|+.|.+...+++.+..+|||||+|+||++.+..+ ...-...+.. +++
T Consensus 122 G~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~~~~~~-----~i~~~t~gkv--------~d~ 188 (327)
T TIGR02845 122 GFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGGGP-----RITSATIGKV--------VDY 188 (327)
T ss_pred CCCCEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEeecCCCC-----ceEEEEEEEE--------Eec
Confidence 9999999999999872 24445221112345789999999999999875411 2222222211 111
Q ss_pred eeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEc---CCCHHHHHHHHHHcCCCccccHHHHHHHH
Q 044410 265 QLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVH---PGGDGLLDQVEKTLGLRKEKLWASRYVLR 340 (402)
Q Consensus 265 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H---~~~~~~~~~~~~~lgi~~ek~~~~~~~l~ 340 (402)
.+.+ -+.||.- +.......|.+.|++.|.++ ++. .++.- ..++.++..+.++-|++.++.+ .
T Consensus 189 g~~d---~~nmgaa----mapaa~dti~~h~~d~~~~~-~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~------~ 254 (327)
T TIGR02845 189 GITD---PLDMGAA----MAPAAADTIEAHFKDTGRSV-DDYDLIVTGDLARVGSEILRKLLKERGYDVTERY------D 254 (327)
T ss_pred CCCC---cccchhh----hhHHHHHHHHHHHHHcCCCh-hhccEEEecchHHHHHHHHHHHHHHcCCChhhcc------c
Confidence 1111 1223322 23344467778899999997 887 55432 3567888888888787654322 2
Q ss_pred hcC----------C---CCc-chHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCc
Q 044410 341 EYG----------N---MGA-PSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF 399 (402)
Q Consensus 341 ~~G----------n---~~s-asi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~ 399 (402)
++| | .|+ +|..+...+++++ ++.|. ..+||+++.|+=++- ....+-..+||
T Consensus 255 dcg~~iy~~~~~~~aggsgc~csa~v~~~~~~~~------~~~g~-~~r~l~v~tgalls~-~s~~q~esip~ 319 (327)
T TIGR02845 255 DCGVMIYRPDQQVFAGGSGCACSAVVTYGHILKE------MLRGK-LKKVLVVATGALLSP-TTFQQGESIPG 319 (327)
T ss_pred cCCeEEEcCCCcccCCCcccchhHHHHHHHHHHH------HhcCc-ceEEEEEEchhhcCc-chhccCCcCch
Confidence 333 2 222 2333334455544 33341 368999999985543 23444455554
No 43
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.80 E-value=3.9e-18 Score=160.94 Aligned_cols=256 Identities=16% Similarity=0.142 Sum_probs=168.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~ 187 (402)
+..+|+.+|+++||+++|++++|||++|+++...+ +..+..+++.||+ + ++++.++|+++..||.+|..+|++
T Consensus 55 AeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI---P--a~dV~gACST~~~AL~lAa~lI~S 127 (337)
T PRK08304 55 AERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI---P--FLGLYGACSTMMESLALGSMLIDG 127 (337)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC---c--EEEEeccCHHHHHHHHHHHHHHhc
Confidence 46799999999999999999999999999875323 4578899999997 2 789999999999999999999999
Q ss_pred CCCCeEEEEEeccCcc---ccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccc
Q 044410 188 NPGARVLVVCSDIRVL---DFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISG 264 (402)
Q Consensus 188 g~~~~vLvv~~e~~s~---~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 264 (402)
|.+++|||++++..+. .|+.|.+...+...+..+++|||+|+||++... . +...-...+.. +++
T Consensus 128 G~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~~-~----~~i~~~t~Gkv--------~D~ 194 (337)
T PRK08304 128 GFADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREGS-G----PRITHATIGKV--------VDL 194 (337)
T ss_pred CCCCEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCCC-C----ceEEEEeEEEE--------Eec
Confidence 9999999999999874 476674433333457889999999999998654 1 12222222211 111
Q ss_pred eeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEc---CCCHHHHHHHHHHcCCCccccHHHHH--H
Q 044410 265 QLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVH---PGGDGLLDQVEKTLGLRKEKLWASRY--V 338 (402)
Q Consensus 265 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H---~~~~~~~~~~~~~lgi~~ek~~~~~~--~ 338 (402)
.+.+ -+.||.- +.......|.+.|++.|.++ +|. .++.- ..++.|+..+.++-|++.++.+...- +
T Consensus 195 g~~d---~~nmgaa----MapAa~dti~~h~~d~~~~~-~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~i 266 (337)
T PRK08304 195 GIKD---PNDMGAA----MAPAAADTIQQHFKDTGRSP-EDYDLIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMI 266 (337)
T ss_pred CCCC---cccchhh----hhHHHHHHHHHHHHHcCCCh-hhccEEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEE
Confidence 1111 1223322 23344467778899999997 887 44432 35678888888888887653322100 0
Q ss_pred HH--h----cCCCCc-chHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCc
Q 044410 339 LR--E----YGNMGA-PSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF 399 (402)
Q Consensus 339 l~--~----~Gn~~s-asi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~ 399 (402)
++ + -|-.|+ +|..+...+++++ ++.|. ..+||+++.|+=++- ....+-..+||
T Consensus 267 y~~~~q~~~aGgSGc~csa~v~~~~~~~~------~~~g~-~~rvl~v~tGaLls~-~s~~qgesip~ 326 (337)
T PRK08304 267 YDSEQQDVFAGGSGCACSAVVTYGYLLKE------LQKGK-LKRVLVVATGALLSP-TSSQQGESIPG 326 (337)
T ss_pred eccCCCcccCCCcccchhHHHHHHHHHHH------HhcCC-ceEEEEEEchhhcCc-chhccCCcCCh
Confidence 10 0 122332 2333333455543 33331 368999999985543 23444445554
No 44
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.80 E-value=1.4e-19 Score=156.08 Aligned_cols=164 Identities=24% Similarity=0.287 Sum_probs=127.8
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
|+|.+++.|+|+..++.++|++.-+ .. ..++....|.++..+..+.|
T Consensus 5 VGI~~i~~y~p~~~v~~~~La~~~g---~d---------~~K~~~glgq~~~av~~~~E--------------------- 51 (174)
T PF01154_consen 5 VGIDAIEFYIPRYYVDQEELAEARG---VD---------PGKYTIGLGQEKMAVPPPDE--------------------- 51 (174)
T ss_dssp EEEEEEEEE-ESEEEEHHHHHHHTT---S----------TCHHHTTT--SEEEE--TTS---------------------
T ss_pred ccEeEEEEecCceEecHHHHHHHhC---CC---------HHHhhhhcCeeEEEeCCCcc---------------------
Confidence 8999999999999999999987621 11 14566678888889988776
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCC--CccccceeeccccchHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLK--PSVNRLMIYTQGCYMGGTVIRL 180 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~--~~~~~~~~i~~~C~~~~~al~~ 180 (402)
.+..||+.|++++|++.++++++|+.|+++|.+. +...+.+.+|++.||+. ..+ +.+++.++|.|+..||+.
T Consensus 52 ----D~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~-~~~e~k~ACygGTaAL~~ 126 (174)
T PF01154_consen 52 ----DIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDC-RGVEMKQACYGGTAALQN 126 (174)
T ss_dssp -----HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSS-EEEEEESGGGHHHHHHHH
T ss_pred ----cHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCce-eeeehhhhhHHHHHHHHH
Confidence 3999999999999999999999999999999998 77889999999999994 333 478999999999999999
Q ss_pred HHHHHHcCC--CCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCC
Q 044410 181 AKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADS 235 (402)
Q Consensus 181 A~~~i~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~ 235 (402)
|..+++++. .+++|||++|..... +.. ...+-|-||+|+||+++.
T Consensus 127 a~~~v~s~~~~g~~aLVVasDiA~y~---~g~-------~e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 127 AVNWVASSPWDGRKALVVASDIARYD---LGS-------AEPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp HHHHHCSTTSTTEEEEEEEEEEE--S---TTT-------TGGG-EEEEEEEEEECS-
T ss_pred HHHHHhcCCCCCCeEEEEeccccccC---CCC-------ccccccceeEEEEecCCC
Confidence 999999974 679999999998632 111 245789999999999864
No 45
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.73 E-value=1.5e-16 Score=159.40 Aligned_cols=259 Identities=15% Similarity=0.157 Sum_probs=169.3
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCccE----EEEEecCC---------------------------CCCCCHHHHHHHH
Q 044410 106 IDEVPKLGKEAALKAIKEWGQPVSKITH----LIFSAFYG---------------------------VDMPGADVRLMRL 154 (402)
Q Consensus 106 ~~~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~~~---------------------------~~~p~~a~~i~~~ 154 (402)
.+....|+.+|+++||+++|++++++|. ++++++.+ ...+..+.+|+..
T Consensus 68 ~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 147 (406)
T cd00834 68 MDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIR 147 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHH
Confidence 3457899999999999999999877653 55555432 1224578899999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc---------------------cCCCCccch
Q 044410 155 LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD---------------------FHEPSETHL 213 (402)
Q Consensus 155 LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~---------------------~~~~~~~~~ 213 (402)
||++.. .+.+..+|++++.||..|..+|++|.++++||+++|..+.. ...|.+.+
T Consensus 148 lgl~g~---~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~- 223 (406)
T cd00834 148 LGLRGP---NYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKD- 223 (406)
T ss_pred hCCCCc---ccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCC-
Confidence 999753 67899999999999999999999999999999999987610 01122211
Q ss_pred hhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410 214 DVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS 292 (402)
Q Consensus 214 ~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 292 (402)
...+++||||+|+||++.+.... .......+.+.+... ++..... .. .....+.++++
T Consensus 224 ---~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~--------------d~~~~~~-~~---~~~~~~~~~i~ 282 (406)
T cd00834 224 ---RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASS--------------DAYHITA-PD---PDGEGAARAMR 282 (406)
T ss_pred ---CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecc--------------cCCCCCC-CC---CCcHHHHHHHH
Confidence 13679999999999997654111 001123343332210 0000000 00 01234567889
Q ss_pred HhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410 293 NAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK 366 (402)
Q Consensus 293 ~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~ 366 (402)
++|+++|+++ +|| ++.+|..+... .+.+.+.++-..++++.+ ..-..+||+.+|+-++.|..++.. +.+|.
T Consensus 283 ~al~~agi~~-~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ 359 (406)
T cd00834 283 AALADAGLSP-EDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVS-STKSMTGHLLGAAGAVEAIATLLA-LRDGV 359 (406)
T ss_pred HHHHHcCCCH-HHCCEEecccccCccccHHHHHHHHHHhcccCCCCcee-CcchhhccchhhhhHHHHHHHHHH-HhcCC
Confidence 9999999997 999 99999776544 334555566543444442 235578999999988887665432 11133
Q ss_pred ccCC-------------------C--CCceEEEEEEcccccceeeEE
Q 044410 367 ATTG-------------------E--GLECGVLFGFGPGLTVETVVL 392 (402)
Q Consensus 367 i~~G-------------------~--~~d~vll~~~G~G~~~~~~ll 392 (402)
+.+- . +..+++..+||.|.+-.+++|
T Consensus 360 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 360 LPPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred cCCCCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 2210 0 014678888998887777664
No 46
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.71 E-value=5.9e-16 Score=154.09 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|+++||+++|++++|||.||++++++ ...+..+..++..+|++... ++++++.+|++++.++..|.++|+
T Consensus 25 ~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~-p~~~V~~~Casg~~ai~~A~~~I~ 103 (393)
T PRK05656 25 PAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSV-PAMTLNKVCGSGLKALHLAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCc-ceEEecccchhHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998876 45677888899999998622 289999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcc
Q 044410 187 NNPGARVLVVCSDIRVL 203 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~ 203 (402)
+|..+.+||+++|++|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 104 CGDAEVIIAGGQENMSL 120 (393)
T ss_pred cCCCCEEEEEEEhhhcc
Confidence 99999999999998764
No 47
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.70 E-value=5.9e-16 Score=156.07 Aligned_cols=262 Identities=15% Similarity=0.147 Sum_probs=171.5
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-CC-------------------CCCHHHHHHHHcCCCC
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-VD-------------------MPGADVRLMRLLGLKP 159 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~~-------------------~p~~a~~i~~~LGl~~ 159 (402)
+..+....|+.+|+++||+++|+++++|| .|+++++++ +. .+..+.+|+..||+..
T Consensus 82 ~~~~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g 161 (424)
T smart00825 82 EAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG 161 (424)
T ss_pred HhcCHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC
Confidence 34455678999999999999999999998 788887643 21 3456788999999976
Q ss_pred ccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------c------CCCCccchhhhhhhhhhc
Q 044410 160 SVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------F------HEPSETHLDVLVVQAVFG 223 (402)
Q Consensus 160 ~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------~------~~~~~~~~~~~~~~~lfG 223 (402)
. .+.+..+|++++.||..|.++|++|..+.|||+++|..... + ..|.+.+ ...+++|
T Consensus 162 ~---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~----~~g~~~g 234 (424)
T smart00825 162 P---SVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD----ADGYVRG 234 (424)
T ss_pred C---ccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC----CCccccc
Confidence 3 68899999999999999999999999999999999974310 0 1122211 2467899
Q ss_pred cCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCC
Q 044410 224 DGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISD 302 (402)
Q Consensus 224 DGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~ 302 (402)
|||+|+||++.+.... ......++.+.+....... . +...+ ....+..+++++|+++|+++
T Consensus 235 eGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~--------------~--~~~~~--~~~~~~~a~~~al~~Agl~~ 296 (424)
T smart00825 235 EGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRS--------------N--GLTAP--SGPAQARLIRQALARAGVDP 296 (424)
T ss_pred ceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCC--------------C--CCCCc--CHHHHHHHHHHHHHHhCCCH
Confidence 9999999997544111 0011223443322110000 0 00001 12345578899999999997
Q ss_pred Ccce-EEEEcCCCHH-----HHHHHHHHcCCCc---cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc-----
Q 044410 303 WNSL-FYVVHPGGDG-----LLDQVEKTLGLRK---EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT----- 368 (402)
Q Consensus 303 ~~di-~~i~H~~~~~-----~~~~~~~~lgi~~---ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~----- 368 (402)
+|| ++.+|-.+.. -.+.+.+.++... .+++.+ .+-..+||+.+|+-.+.|...+.. +.++.+.
T Consensus 297 -~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ip~~~~~ 373 (424)
T smart00825 297 -ADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLG-SVKSNIGHLEAAAGVAGLIKVVLA-LRHGTIPPTLHF 373 (424)
T ss_pred -HHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEe-ccccccCCcccchhHHHHHHHHHH-HhCCCCCCCCCC
Confidence 999 9999955432 3445666665421 233332 123457999999888777654421 0002111
Q ss_pred ---------------------C---CCCCceEEEEEEcccccceeeEEe
Q 044410 369 ---------------------T---GEGLECGVLFGFGPGLTVETVVLQ 393 (402)
Q Consensus 369 ---------------------~---G~~~d~vll~~~G~G~~~~~~ll~ 393 (402)
+ +...+.++..+||-|...++++|+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~ 422 (424)
T smart00825 374 ETPNPHIDLEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILE 422 (424)
T ss_pred CCCCCCCCcccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEe
Confidence 0 001267899999999888888886
No 48
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.70 E-value=5.2e-16 Score=154.39 Aligned_cols=252 Identities=14% Similarity=0.106 Sum_probs=167.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKP-SVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~-~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
+..+|+.+|+++||+++|++++|||.||++++++ +..|..+..++..||++. .+ +++++++|++++.+|.+|.++|
T Consensus 21 ~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~--~~~v~~~c~s~~~al~~A~~~I 98 (386)
T cd00751 21 SADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVP--ATTVNRVCGSGLQAVALAAQSI 98 (386)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc--hhhhccccHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999987776 556778888999999985 43 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeccCccc-c----------CC--------CC---c---c----------------chhh---------
Q 044410 186 ENNPGARVLVVCSDIRVLD-F----------HE--------PS---E---T----------------HLDV--------- 215 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~~-~----------~~--------~~---~---~----------------~~~~--------- 215 (402)
++|..++|||+++|++|.. + .. |. + . .+++
T Consensus 99 ~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~~ 178 (386)
T cd00751 99 AAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSH 178 (386)
T ss_pred HCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 9999999999999987531 0 00 00 0 0 0000
Q ss_pred -h----------------------------------------------------------hhhhhhccCcEEEEEccCCC
Q 044410 216 -L----------------------------------------------------------VVQAVFGDGAGAAIIGADSD 236 (402)
Q Consensus 216 -~----------------------------------------------------------~~~~lfGDGAaA~vL~~~~~ 236 (402)
+ .....++|||+|+||.+.+.
T Consensus 179 ~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~dGaaavvl~s~~~ 258 (386)
T cd00751 179 QRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEK 258 (386)
T ss_pred HHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCCcceEEEEEecHHH
Confidence 0 00012246666666655432
Q ss_pred CCCCC-CCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCC
Q 044410 237 ISNHE-SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGG 314 (402)
Q Consensus 237 ~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~ 314 (402)
..... .+...+.+.+... . +... .......+++++++++|+++ +|| ++-+|-..
T Consensus 259 a~~~~~~~~~~I~g~~~~~----~----------------~~~~---~~~~~~~a~~~a~~~Agi~~-~did~~e~~d~f 314 (386)
T cd00751 259 AKELGLKPLARIVGYAVAG----V----------------DPAI---MGIGPVPAIPKALKRAGLTL-DDIDLIEINEAF 314 (386)
T ss_pred HHHCCCCeeEEEEEEEEcc----C----------------CCcc---cchhHHHHHHHHHHHcCCCH-HHcCEEEeechh
Confidence 00000 1112233222110 0 0000 01123478889999999997 999 88899766
Q ss_pred HHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEe
Q 044410 315 DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393 (402)
Q Consensus 315 ~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~ 393 (402)
....-...+.||+.+..+..+ --.-.+||+..|+-...+.+++.+.. |+ .+ .+.+...-|+|...+++|++
T Consensus 315 ~~~~~~~~e~lg~~~~pvn~~-GG~l~~Gh~~gasG~~~~~e~~~qL~--g~--~~---~~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 315 AAQALACLKELGLDPEKVNVN-GGAIALGHPLGASGARIVVTLLHELK--RR--GG---RYGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred HHHHHHHHHHhCCChhhcCCC-cchHhhCccHHHHHHHHHHHHHHHHH--hc--CC---CEEEEEEcccccceEEEEEE
Confidence 555555678899876444432 12336899999988888888777521 21 23 56677667777777777776
No 49
>PRK09051 beta-ketothiolase; Provisional
Probab=99.68 E-value=2.7e-15 Score=149.17 Aligned_cols=95 Identities=12% Similarity=0.009 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCC-CCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDM-PGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~-p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
+..+|+.+|+++||+++|++++|||.||++++++ ... +..+..++..+|++.... +++++.+|+|++.|+..|.++|
T Consensus 26 ~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p-~~~V~~aCaSg~~Al~~A~~~I 104 (394)
T PRK09051 26 APTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETP-AFNVNRLCGSGLQAIVSAAQAI 104 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCc-eEEecccchHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999887 433 456666777889974222 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|..+.|||+++|++|.
T Consensus 105 ~sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 105 LLGDADVAIGGGAESMSR 122 (394)
T ss_pred HcCCCCEEEEEeehhccc
Confidence 999999999999999874
No 50
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.67 E-value=9.5e-15 Score=137.31 Aligned_cols=257 Identities=17% Similarity=0.153 Sum_probs=164.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+...+|+.+|+++||+++|++++|||+++.++...+..|+ ..+++.||++ .+.+.++|+++..||.+|..+|+
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP-----~~gV~gACSTg~eAL~lAa~~Va 124 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP-----YLGLFGACSTSMEGLALAALIVN 124 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC-----ccceeecCHHHHHHHHHHHHHHH
Confidence 3577999999999999999999999999999887555555 5999999955 57899999999999999999999
Q ss_pred cCCCCeEEEEEeccCc---cccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCccccc
Q 044410 187 NNPGARVLVVCSDIRV---LDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYIS 263 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s---~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 263 (402)
+|.+++||++++...+ +.|+.|.+...+...+..+---||+|+||++... . +...-...+.. ++
T Consensus 125 SG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~~-~----~~i~~~T~Gkv--------~D 191 (334)
T PRK12404 125 SGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGD-G----PRVTSATIGRV--------VD 191 (334)
T ss_pred cCCCCEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCCC-C----ceEEEEEEEEE--------Ee
Confidence 9999999999988875 3466665432223334556668999999987643 1 12222222211 11
Q ss_pred ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEc---CCCHHHHHHHHHHcCCCc-cccHHHHH-
Q 044410 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVH---PGGDGLLDQVEKTLGLRK-EKLWASRY- 337 (402)
Q Consensus 264 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H---~~~~~~~~~~~~~lgi~~-ek~~~~~~- 337 (402)
+.+.+ -+.||.- +.......|.+.|++.|.++ +|. .++.- ..++.|+..+.++-|++. ++.+...-
T Consensus 192 ~g~~d---~~nMGaa----MAPAA~dti~~h~~d~~~~~-~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~DCG~ 263 (334)
T PRK12404 192 MGLTD---PFNMGGA----MAPAAVDTIEAHLRDRQIDA-SYYDLIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQDCGL 263 (334)
T ss_pred cCCCC---cccchhh----hhHHHHHHHHHHHHHhCCCh-hhccEEEEcchHHHHHHHHHHHHHHcCCCCCcccccccCe
Confidence 11111 1223322 23334467778889999997 887 55432 356788888888877765 32221000
Q ss_pred -HH---H--hcCCCCc-chHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCc
Q 044410 338 -VL---R--EYGNMGA-PSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF 399 (402)
Q Consensus 338 -~l---~--~~Gn~~s-asi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~ 399 (402)
++ + .-|-.|+ +|..+...+++++ ++.|. ..+||+++.|+=++- ....+-..+||
T Consensus 264 ~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~------~~~g~-~~rvL~v~TGALlS~-~s~~qgesIP~ 324 (334)
T PRK12404 264 LIYREGQPVIAGASGPGCSATVTYGHLLNR------MKRGE-LKRILVVATGALLSP-LSFQQGETIPC 324 (334)
T ss_pred EEecCCCcccCCCcccchHHHHHHHHHHHH------HhcCC-ceEEEEEEchhhcCc-chhccCCcCCh
Confidence 00 0 1122232 2333334455544 33341 368999999985543 23444444554
No 51
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.66 E-value=5.3e-15 Score=147.39 Aligned_cols=252 Identities=17% Similarity=0.110 Sum_probs=167.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-C--CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-V--DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~--~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
+..+|+.+|+++||+++|++++|||.|+++++.+ . ..+..+..++..||++..+ .+.++++|+++..+|..|..+
T Consensus 21 ~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~aCasg~~ai~~A~~~ 98 (389)
T PRK06064 21 SLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIP--ATRVEAACASGGAALRQAYLA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCC--eeEEeCCcHHHHHHHHHHHHH
Confidence 3789999999999999999999999999988765 3 2467888999999998544 788999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCcccc----------------CCCCccc------------------------------hh----
Q 044410 185 AENNPGARVLVVCSDIRVLDF----------------HEPSETH------------------------------LD---- 214 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~~~----------------~~~~~~~------------------------------~~---- 214 (402)
|++|.+++|||+++|.++... ..|.... ++
T Consensus 99 I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~ 178 (389)
T PRK06064 99 VASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYNGSK 178 (389)
T ss_pred HHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999765210 0010000 00
Q ss_pred -------------------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecC
Q 044410 215 -------------------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEM 269 (402)
Q Consensus 215 -------------------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 269 (402)
.......++|||+|+||++.+...........+.+.+....+..
T Consensus 179 np~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v~I~g~g~~~~~~~----------- 247 (389)
T PRK06064 179 NPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEYTDTPVWIKASGQASDTIA----------- 247 (389)
T ss_pred CcHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHhcCCCeEEEEEEEecCccc-----------
Confidence 00011256999999999875431111111234554432211000
Q ss_pred ceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc----------------cc
Q 044410 270 GTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE----------------KL 332 (402)
Q Consensus 270 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e----------------k~ 332 (402)
+...+++.. ......+++++|+++|+++ +|| ++-+|-......-...+.||+.+. ++
T Consensus 248 ---~~~~~~~~~--~~~~~~a~~~al~~aGi~~-~did~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~ 321 (389)
T PRK06064 248 ---LHDRKDFTT--LDAAVVAAEKAYKMAGIEP-KDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDI 321 (389)
T ss_pred ---ccccccccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCe
Confidence 000011110 1233467889999999997 999 999998877776677899998642 22
Q ss_pred HHHHHH---HHhcCCCCcchHHHHHHHHHHhhhhhhcc------cCCCCCceEEEEEEccc
Q 044410 333 WASRYV---LREYGNMGAPSVFFILDEVRKKSIEEMKA------TTGEGLECGVLFGFGPG 384 (402)
Q Consensus 333 ~~~~~~---l~~~Gn~~sasi~i~L~~~~~~~~~~g~i------~~G~~~d~vll~~~G~G 384 (402)
+.| . .--+||...++-...+.+++.+.. |+- -+| .++.+..++|..
T Consensus 322 pvN--~~GG~l~~Ghp~~a~G~~~~~e~~~qL~--g~a~~g~rqv~~--a~~~l~~~~g~~ 376 (389)
T PRK06064 322 PVN--PSGGLKAKGHPVGATGVSQAVEIVWQLR--GEAEKGRQQVIG--AGYGLTHNVGGT 376 (389)
T ss_pred eec--CCCCcccCCCCcchhHHHHHHHHHHHHh--CCCCCCCccCCC--ccEEEEecCCCc
Confidence 332 1 123899998888888887776522 221 123 267777777743
No 52
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.66 E-value=2.5e-15 Score=149.40 Aligned_cols=94 Identities=14% Similarity=0.111 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKP-SVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~-~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
+..+|+.+|+++||+++|++++|||.+++++.++ ...|..+..++..+|++. .+ +++++.+|++++.+|..|.++|
T Consensus 20 t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~--~~~v~~~Casg~~al~~A~~~I 97 (386)
T TIGR01930 20 SAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVP--AYTVNRQCASGLQAVILAAQLI 97 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCce--eeeecchhhHHHHHHHHHHHHH
Confidence 4789999999999999999999999999988776 445777888999999985 44 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|.+++|||+++|+++.
T Consensus 98 ~sG~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 98 RAGEADVVVAGGVESMSR 115 (386)
T ss_pred HCCCCCEEEEEEehhhcc
Confidence 999999999999998653
No 53
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.65 E-value=4.2e-15 Score=147.69 Aligned_cols=95 Identities=15% Similarity=0.078 Sum_probs=85.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCC-CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMP-GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p-~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
+..+|+.+|++++|+++|++++|||.||++++.+ ...| ..+..++..+|++... ++++++.+|+|++.||.+|.++|
T Consensus 26 ~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~-p~~~V~~aCaSg~~Al~~A~~~I 104 (392)
T PRK07108 26 HGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV-PGMTVNRFCSSGLQTIALAAQRV 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC-ceeeecchhhHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999887 4444 4888999999998533 28999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|.++.+|+++.|++|.
T Consensus 105 ~sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 105 IAGEGDVFVAGGVESISC 122 (392)
T ss_pred HCCCCCEEEEEEEeccCC
Confidence 999999999999999974
No 54
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.64 E-value=1.5e-14 Score=143.79 Aligned_cols=95 Identities=12% Similarity=0.030 Sum_probs=84.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
++.+|+.+|++++|+++|+++++||.||+++.++ .. .+..+...+..+|++... ++++++.+|+|++.||.+|.++|
T Consensus 27 ~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~-pa~~Vn~aCaSg~~Ai~~A~~~I 105 (402)
T PRK08242 27 KPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETV-PGVQINRFCASGLEAVNLAAAKV 105 (402)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCC-CeEEEcchhhhHHHHHHHHHHHH
Confidence 4889999999999999999999999999999987 33 345666777888996543 38999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|..+.+|++++|++|.
T Consensus 106 ~sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 106 RSGWDDLVIAGGVESMSR 123 (402)
T ss_pred HcCCCCEEEEEEEEccCC
Confidence 999999999999999984
No 55
>PRK05790 putative acyltransferase; Provisional
Probab=99.64 E-value=1.5e-14 Score=144.28 Aligned_cols=253 Identities=16% Similarity=0.120 Sum_probs=168.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKP-SVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~-~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
+..+|+.+|+++||+++|++++|||.|+++++++ ...+..+..++..+|++. .+ .++++.+|++++.+|..|.++|
T Consensus 25 ~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~--~~~v~~~Casg~~al~~A~~~I 102 (393)
T PRK05790 25 SAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVP--ALTINKVCGSGLKAVALAAQAI 102 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCc--eeeecccchHHHHHHHHHHHHH
Confidence 4789999999999999999999999999988766 334455566777889874 33 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeccCccc-c-----C-----------C------CCcc-------------------chh---------
Q 044410 186 ENNPGARVLVVCSDIRVLD-F-----H-----------E------PSET-------------------HLD--------- 214 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~~-~-----~-----------~------~~~~-------------------~~~--------- 214 (402)
++|..++|||+++|++|.. . . + +.+. +++
T Consensus 103 ~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~ 182 (393)
T PRK05790 103 RAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALAS 182 (393)
T ss_pred HcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9999999999999986421 0 0 0 0000 000
Q ss_pred ------hhh------------------------------------------------------hhhhhccCcEEEEEccC
Q 044410 215 ------VLV------------------------------------------------------VQAVFGDGAGAAIIGAD 234 (402)
Q Consensus 215 ------~~~------------------------------------------------------~~~lfGDGAaA~vL~~~ 234 (402)
++. ....++|||+|+||++.
T Consensus 183 ~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s~ 262 (393)
T PRK05790 183 QQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSE 262 (393)
T ss_pred HHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEecH
Confidence 000 01244677777777764
Q ss_pred CCCCCC-CCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcC
Q 044410 235 SDISNH-ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHP 312 (402)
Q Consensus 235 ~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~ 312 (402)
+..... ..+..++.+.+.... ..... ......+++++++++|+++ +|| ++-+|-
T Consensus 263 e~a~~~~~~~~~~I~g~~~~~~--------------------~~~~~---~~~~~~a~~~a~~~Agi~~-~did~~e~~d 318 (393)
T PRK05790 263 AKAKELGLTPLARIVSYAVAGV--------------------DPAIM---GIGPVPAIRKALEKAGWSL-ADLDLIEINE 318 (393)
T ss_pred HHHHHCCCCeeEEEEEEEEccC--------------------CCCcc---chhHHHHHHHHHHHcCCCH-HHCCEEEeCc
Confidence 431100 011123443322100 00000 0123467889999999997 999 888887
Q ss_pred CCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEE
Q 044410 313 GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL 392 (402)
Q Consensus 313 ~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll 392 (402)
.-....-...+.||+...++..+ --.--+||...|+-...+.++.++.- + +.+ .+.+....|.|..-+++||
T Consensus 319 ~f~~~~l~~~e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~qL~--~--~~~---~~gl~~~~~~~g~g~~~~~ 390 (393)
T PRK05790 319 AFAAQALAVEKELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHEMK--R--RGA---KKGLATLCIGGGQGVALIV 390 (393)
T ss_pred HHHHHHHHHHHHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHHHH--h--cCC---CeEEEEEeccCCceeEEEE
Confidence 54444445678899876665543 23456899999998888888887521 2 122 5677777777777788888
Q ss_pred ee
Q 044410 393 QS 394 (402)
Q Consensus 393 ~~ 394 (402)
+.
T Consensus 391 e~ 392 (393)
T PRK05790 391 ER 392 (393)
T ss_pred Ec
Confidence 75
No 56
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.63 E-value=1.6e-14 Score=135.98 Aligned_cols=308 Identities=19% Similarity=0.168 Sum_probs=192.7
Q ss_pred EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410 24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA 103 (402)
Q Consensus 24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
++|.++-.|+|.+.++|+|+++.- ..+. .++.-..|..+=-|+.+.|
T Consensus 12 vGI~aieiyfP~~yV~Q~elEk~d---~vs~---------gKytIGLGq~~MgfcsdrE--------------------- 58 (462)
T KOG1393|consen 12 VGIIAIEIYFPSQYVDQEELEKFD---GVSA---------GKYTIGLGQTQMGFCSDRE--------------------- 58 (462)
T ss_pred cceeEEEEEcCccccChhhHhhcC---Cccc---------cceEeccCcceecccCchh---------------------
Confidence 899999999999999999998652 1111 1222233444444444433
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcC--CCCccccceeeccccchHHHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLG--LKPSVNRLMIYTQGCYMGGTVIRL 180 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LG--l~~~~~~~~~i~~~C~~~~~al~~ 180 (402)
....|+.-+.++++++..++++.|..|-++|.|- .-..+.-..+.+.++ -..+.. ..|..++|.|+..||-.
T Consensus 59 ----Di~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIE-GiDttnACYGGtaALfn 133 (462)
T KOG1393|consen 59 ----DIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIE-GIDTTNACYGGTAALFN 133 (462)
T ss_pred ----hhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccc-cccccccccccHHHHHH
Confidence 3788999999999999999999999999999886 555566667777666 344554 78899999999999999
Q ss_pred HHHHHHcC--CCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEE---Eeeeeeec
Q 044410 181 AKDIAENN--PGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQI---LSCTQTTV 255 (402)
Q Consensus 181 A~~~i~~g--~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~---~~~~~~~~ 255 (402)
|..+|++. ..+.+|||++|..-..- .+ ...+=|-||+|++++++.. -.++ +.++. .......-
T Consensus 134 avnWiESssWDGr~aivV~gDIAvY~~-G~---------aRpTGGAgAVAmLIgPnAp-i~fe-rglr~thM~hayDFyK 201 (462)
T KOG1393|consen 134 AVNWIESSSWDGRYAIVVCGDIAVYAK-GN---------ARPTGGAGAVAMLIGPNAP-IIFE-RGLRATHMQHAYDFYK 201 (462)
T ss_pred HhhhhhhcccCCceeEEEEeeEEEecC-CC---------CCCCCCcceEEEEEcCCCc-eEec-ccchhhhhhhhhhccC
Confidence 99999987 47999999999976310 11 2345699999999999865 1100 01110 00000011
Q ss_pred CCCcccccceeecCceEEEeCCchhHHHHHhHH--------HHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHc-
Q 044410 256 PDTENYISGQLKEMGTYCHLSRDVPVAIGNYVD--------KCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTL- 325 (402)
Q Consensus 256 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~--------~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~l- 325 (402)
|.-... ..--+ |+.........+. ++.+.-.+.-+... ++. ++++|.+--++.++-..+|
T Consensus 202 Pdl~SE---yPvVD------GklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l-~~fdy~ifHsP~cKlvqKs~arl~ 271 (462)
T KOG1393|consen 202 PDLLSE---YPVVD------GKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNL-NSFDYIIFHSPYCKLVQKSLARLL 271 (462)
T ss_pred CCCCCc---Cceec------CeehHHHHHHHHHHHHHHHHHHHHHHhccccCccc-ccCCeEEEeCchhhhHHHHHHHhh
Confidence 211000 00011 2221222222222 22222223334444 577 8999988666555411111
Q ss_pred -----------------------------------------CCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh
Q 044410 326 -----------------------------------------GLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE 364 (402)
Q Consensus 326 -----------------------------------------gi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~ 364 (402)
.+-.+|+-.+.-.-.+.||+.++|++..|..++.....+
T Consensus 272 ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~~~d 351 (462)
T KOG1393|consen 272 YNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLASLLSAVPAD 351 (462)
T ss_pred hhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHHHHHhccchh
Confidence 111112222210113789999999999999999863211
Q ss_pred hcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410 365 MKATTGEGLECGVLFGFGPGLTVETVVLQSVS 396 (402)
Q Consensus 365 g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~ 396 (402)
--.| ++|+++++|+|++.+..-+|+.+
T Consensus 352 --~l~G---krig~FSYGSGlAAs~fs~~v~~ 378 (462)
T KOG1393|consen 352 --ELAG---KRIGMFSYGSGLAASMFSLRVTQ 378 (462)
T ss_pred --hhhc---cEEEEEeecCcchhheEEEEecC
Confidence 1246 89999999999999888888754
No 57
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.62 E-value=1.2e-14 Score=144.61 Aligned_cols=95 Identities=16% Similarity=0.074 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHHHc-CCCCCCccEEEEEecCC-CCCCCHHHH-HHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEW-GQPVSKITHLIFSAFYG-VDMPGADVR-LMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~~~-~~~p~~a~~-i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
+..+|+.+|++++|+++ |++++|||.||++++.+ ...+....+ +...+|++... ++++++.+|++++.|+..|..+
T Consensus 30 s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~-p~~~V~~aCaSg~~Al~~A~~~ 108 (399)
T PRK09052 30 RPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSV-GGVTVNRFCASGLQAVAMAADR 108 (399)
T ss_pred CHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCC-ceeeecchhhHHHHHHHHHHHH
Confidence 47899999999999997 99999999999998887 444444444 55566998522 2899999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCcc
Q 044410 185 AENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~ 203 (402)
|++|..+.|||+++|++|.
T Consensus 109 I~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 109 IRVGEADVMIAAGVESMSM 127 (399)
T ss_pred HHCCCCCEEEEEEEecccc
Confidence 9999999999999998874
No 58
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.62 E-value=3.6e-14 Score=140.82 Aligned_cols=233 Identities=16% Similarity=0.051 Sum_probs=160.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|+++||+++|++++|||.++++++.+ ...+..+..++..||++..+ .+.++.+|++++.++..|.++|+
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKP--ATRVEAAGASGSAAVRAAAAAIA 92 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCcc--eeeEeCccHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999988766 44577889999999997544 78899999999999999999999
Q ss_pred cCCCCeEEEEEeccCcccc-----C----CCCc----c----c-hh----------------------------------
Q 044410 187 NNPGARVLVVCSDIRVLDF-----H----EPSE----T----H-LD---------------------------------- 214 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~~~-----~----~~~~----~----~-~~---------------------------------- 214 (402)
+|..+.|||+++|.++... . ++.+ . . ..
T Consensus 93 sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~n 172 (375)
T cd00829 93 SGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARN 172 (375)
T ss_pred hCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999876320 0 0000 0 0 00
Q ss_pred ------------------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCc
Q 044410 215 ------------------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMG 270 (402)
Q Consensus 215 ------------------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 270 (402)
.......++|||+|+||++.+.......+...+.+.+....+.. + +
T Consensus 173 p~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~~~~~~~i~g~~~~~~~~~---~-~------ 242 (375)
T cd00829 173 PYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVGAASDTPS---L-S------ 242 (375)
T ss_pred ChhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhcCCCCeEEEEEEEecCCcc---c-c------
Confidence 00011246999999999876541111122334444332211000 0 0
Q ss_pred eEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCc--c----------------c
Q 044410 271 TYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRK--E----------------K 331 (402)
Q Consensus 271 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~--e----------------k 331 (402)
.+..+ ........+++++|+++|+++ +|| ++-+|-......-...+.||+.+ + +
T Consensus 243 -----~~~~~-~~~~~~~~a~~~al~~Agl~~-~did~~ei~d~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~p 315 (375)
T cd00829 243 -----ERDDF-LSLDAARLAARRAYKMAGITP-DDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLP 315 (375)
T ss_pred -----ccccc-cccHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCcc
Confidence 00000 012334568899999999997 999 99999888878888899999987 3 2
Q ss_pred cHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410 332 LWASRYVLREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 332 ~~~~~~~l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
+..+ --+-.+||...++-...+.++..+
T Consensus 316 vN~~-GG~la~Ghp~gatG~~~~~e~~~q 343 (375)
T cd00829 316 VNTS-GGLLSKGHPLGATGLAQAVEAVRQ 343 (375)
T ss_pred ccCC-CchhcCCCCccHHHHHHHHHHHHH
Confidence 2221 012247999998887777776664
No 59
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.62 E-value=1.9e-14 Score=144.30 Aligned_cols=257 Identities=14% Similarity=0.108 Sum_probs=165.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCC-cc----EEEEEecCC-----------------------CCC--CCHHHHHHHHcC
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSK-IT----HLIFSAFYG-----------------------VDM--PGADVRLMRLLG 156 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~d-Id----~li~~s~~~-----------------------~~~--p~~a~~i~~~LG 156 (402)
+....|+..|+++||+++|+++++ ++ .++++++.. ... ...+.+|+..+|
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T cd00828 70 DRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLL 149 (407)
T ss_pred CHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhC
Confidence 457789999999999999998766 43 355555321 111 457789999999
Q ss_pred C-CCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCcc--------------------ccCCCCccchhh
Q 044410 157 L-KPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL--------------------DFHEPSETHLDV 215 (402)
Q Consensus 157 l-~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~--------------------~~~~~~~~~~~~ 215 (402)
+ ... .+.+..+|++++.||..|.++|++|..+.+||+++|..+. ....|.+.+
T Consensus 150 l~~Gp---~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~--- 223 (407)
T cd00828 150 SSHGP---IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET--- 223 (407)
T ss_pred cCCCC---CcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC---
Confidence 9 653 6889999999999999999999999999999999998641 011132221
Q ss_pred hhhhhhhccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHh
Q 044410 216 LVVQAVFGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNA 294 (402)
Q Consensus 216 ~~~~~lfGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 294 (402)
...+++||||+++||++.+..... .....++.+.+... ++.... ... -.+.+.++++++
T Consensus 224 -~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~--------------d~~~~~-~~~----~~~~~~~a~~~A 283 (407)
T cd00828 224 -RDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTT--------------DGAGRS-VPA----GGKGIARAIRTA 283 (407)
T ss_pred -CCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEecc--------------CCCCCC-CCC----ChHHHHHHHHHH
Confidence 247899999999999986541110 01122333322211 110000 011 134566789999
Q ss_pred hccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc
Q 044410 295 MSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT 368 (402)
Q Consensus 295 L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~ 368 (402)
|+++|+++ +|| ++..|-.+... .+.+.+.++-..+..+.+ .+-..+||+.+|+-++.|...+.. +.++.+.
T Consensus 284 l~~Agi~~-~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~-s~K~~~Gh~~~Asg~~~l~~~~~~-l~~~~ip 360 (407)
T cd00828 284 LAKAGLSL-DDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVT-AQKALFGHSKGAAGALQLIGALQS-LEHGLIP 360 (407)
T ss_pred HHHcCCCH-HHcCEEecccccCccccHHHHHHHHHHHhccCCCceee-cccchhccchhhhhHHHHHHHHHH-HhcCccC
Confidence 99999997 999 99999665443 333444554321222221 146689999999988887665432 1113222
Q ss_pred CC-------------------CC----CceEEEEEEcccccceeeEE
Q 044410 369 TG-------------------EG----LECGVLFGFGPGLTVETVVL 392 (402)
Q Consensus 369 ~G-------------------~~----~d~vll~~~G~G~~~~~~ll 392 (402)
+- .+ ..+++..+||.|.+-+++++
T Consensus 361 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 361 PTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CCCCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 10 00 14678888998888777664
No 60
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.61 E-value=2.8e-14 Score=141.90 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|+++||+++|++++|||.||+++.++ ...+..+..++..+|++... ++++++.+|+|++.|+..|.++|+
T Consensus 25 ~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~-p~~~V~~~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 25 KATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEV-QTETVNKVCASGLRAVTLADQIIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCc-ceeehhhhhhHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998876 23455667789999997433 289999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcc
Q 044410 187 NNPGARVLVVCSDIRVL 203 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~ 203 (402)
+|..+.|||+++|++|.
T Consensus 104 sG~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 104 AGDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999874
No 61
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.61 E-value=2.5e-14 Score=143.42 Aligned_cols=261 Identities=15% Similarity=0.153 Sum_probs=166.6
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCccE----EEEEecCC----------------------C----CCC-CHHHHHHH
Q 044410 105 LIDEVPKLGKEAALKAIKEWGQPVSKITH----LIFSAFYG----------------------V----DMP-GADVRLMR 153 (402)
Q Consensus 105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~~~----------------------~----~~p-~~a~~i~~ 153 (402)
..+....|+.+|+++||+++|+++++||. ++++++.. + ..+ ..+.+|..
T Consensus 67 ~~~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 146 (407)
T TIGR03150 67 RMDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISI 146 (407)
T ss_pred hcCHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHH
Confidence 34456789999999999999999988886 66665321 0 011 24567899
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c----------CCCCccc
Q 044410 154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F----------HEPSETH 212 (402)
Q Consensus 154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~----------~~~~~~~ 212 (402)
.+|+... .+.+..+|++++.||..|..+|++|.++.+||+++|..... + ..|.+.+
T Consensus 147 ~~gl~g~---~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~ 223 (407)
T TIGR03150 147 RYGAKGP---NHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD 223 (407)
T ss_pred HhCCCCc---ccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC
Confidence 9999754 67889999999999999999999999999999999973210 0 0122211
Q ss_pred hhhhhhhhhhccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHH
Q 044410 213 LDVLVVQAVFGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL 291 (402)
Q Consensus 213 ~~~~~~~~lfGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 291 (402)
+ ..+++||||+|+||++.+..... ......+.+.+.... +..+. .+. + .......++
T Consensus 224 ~----~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d--------------~~~~~-~~~-~--~~~~~~~ai 281 (407)
T TIGR03150 224 R----DGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGD--------------AYHIT-APA-P--EGEGAARAM 281 (407)
T ss_pred C----CcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCC--------------CCCCC-CCC-C--CcHHHHHHH
Confidence 1 35789999999999976541110 011223443322100 00000 000 0 112345788
Q ss_pred HHhhccCCCCCCcce-EEEEcCCCH-----HHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhh
Q 044410 292 SNAMSPIGISDWNSL-FYVVHPGGD-----GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEM 365 (402)
Q Consensus 292 ~~~L~~~gl~~~~di-~~i~H~~~~-----~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g 365 (402)
+++|+++|+++ +|| ++.+|-.+. .-...+.+.++-...+++.+ ..-..+||+.+|+-.+.+..++.. +.++
T Consensus 282 ~~Al~~Agi~~-~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~~~~~~~-l~~~ 358 (407)
T TIGR03150 282 RAALKDAGINP-EDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVS-STKSMTGHLLGAAGAIEAIFTVLA-IRDG 358 (407)
T ss_pred HHHHHHcCCCH-hHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCcee-CCcchhchhHHHHHHHHHHHHHHH-HhcC
Confidence 89999999997 999 999997765 33555677777544445442 123467999888877766554432 1112
Q ss_pred cccC--------------------CC-CCceEEEEEEcccccceeeEEe
Q 044410 366 KATT--------------------GE-GLECGVLFGFGPGLTVETVVLQ 393 (402)
Q Consensus 366 ~i~~--------------------G~-~~d~vll~~~G~G~~~~~~ll~ 393 (402)
.+.+ +. +..+++..+||.|.+-.+++|+
T Consensus 359 ~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 359 VVPPTINLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred CcCCCCCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 2111 10 1146788889998888887764
No 62
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.60 E-value=3e-14 Score=142.33 Aligned_cols=95 Identities=16% Similarity=0.116 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|+++||+++|++++|||.|+++++.+ ...|..+..++..+|++.... +++++.+|++++.++..|.++|+
T Consensus 25 ~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p-~~~V~~~CaSg~~Al~~A~~~I~ 103 (404)
T PRK06205 25 PAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVP-GMQLDRRCGSGLQAVITAAMQVQ 103 (404)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc-eeehhhhhhHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999998887 566788889999999984222 78999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcc
Q 044410 187 NNPGARVLVVCSDIRVL 203 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~ 203 (402)
+|.++.|||+++|++|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 104 TGAADVVIAGGAESMSN 120 (404)
T ss_pred cCCCCEEEEeeehhhcc
Confidence 99999999999999873
No 63
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.59 E-value=9.9e-14 Score=138.02 Aligned_cols=234 Identities=13% Similarity=0.030 Sum_probs=157.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|+++||+++|++++|||.||++++.+ ...+..+..++..||++..+ .++++++|++++.+|..|..+|+
T Consensus 20 ~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~--~~~v~~~casg~~al~~A~~~I~ 97 (385)
T PRK12578 20 SVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKV--PLRVEAMCATGLAASLTAYTAVA 97 (385)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCC--eeEEeccCHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999988765 22344578899999998765 68999999999999999999999
Q ss_pred cCCCCeEEEEEeccCccc----------------cC-CCCc---c-----------------------------------
Q 044410 187 NNPGARVLVVCSDIRVLD----------------FH-EPSE---T----------------------------------- 211 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~~----------------~~-~~~~---~----------------------------------- 211 (402)
+|.+++|||+++|++|.. +. .|.. .
T Consensus 98 sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~n 177 (385)
T PRK12578 98 SGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGAMN 177 (385)
T ss_pred CCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhcC
Confidence 999999999999986521 00 0000 0
Q ss_pred ---------chh------------hhhhhhhhccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCcccccceeecC
Q 044410 212 ---------HLD------------VLVVQAVFGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYISGQLKEM 269 (402)
Q Consensus 212 ---------~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 269 (402)
+.+ .......++|||+|+||.+.+..... ..+...+.+.+....+.. +.
T Consensus 178 p~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~-----~~---- 248 (385)
T PRK12578 178 PKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAY-----VA---- 248 (385)
T ss_pred ChhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCccc-----cc----
Confidence 000 11223356799999999875431110 012344554433211110 00
Q ss_pred ceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc----------------cc
Q 044410 270 GTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE----------------KL 332 (402)
Q Consensus 270 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e----------------k~ 332 (402)
..+++.. ......+++++|+++|+++ +|| ++-+|-....+--...+.||+.+. ++
T Consensus 249 -----~~~~~~~--~~~~~~a~~~al~~Agi~~-~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~ 320 (385)
T PRK12578 249 -----RRGEWVG--FKATQLAARQAYNMAKVTP-NDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKV 320 (385)
T ss_pred -----ccccccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCe
Confidence 0011111 1123467889999999997 999 889998877777777889998762 12
Q ss_pred HHHH-HHHHhcCCCCcchHHHHHHHHHHh
Q 044410 333 WASR-YVLREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 333 ~~~~-~~l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
+.|. -=+--+||...|+-+..+.+++.+
T Consensus 321 pvN~~GG~la~GhP~gatG~~~v~e~~~q 349 (385)
T PRK12578 321 GVNLFGGLKAKGHPLGATGLSMIYEITKQ 349 (385)
T ss_pred eeCCCCCcccCCCCccHHHHHHHHHHHHH
Confidence 2210 012247999988888888877764
No 64
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.58 E-value=4.6e-14 Score=140.67 Aligned_cols=95 Identities=16% Similarity=0.120 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|++++|+++|++++|||.||+++..+ ......+......+|++... ++++++.+|+|++.|+..|.++|+
T Consensus 30 ~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~-p~~~V~~aCaSG~~Av~~A~~~I~ 108 (397)
T PRK06954 30 TAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSV-GCTTVNKMCGSGMRAAMFAHDMLV 108 (397)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCc-cEeeccccchHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998776 33333444445556776533 289999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcc
Q 044410 187 NNPGARVLVVCSDIRVL 203 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~ 203 (402)
+|.++.+||+++|++|.
T Consensus 109 sG~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 109 AGSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCCEEEEEeeeccCC
Confidence 99999999999999883
No 65
>PRK06059 lipid-transfer protein; Provisional
Probab=99.57 E-value=1.5e-13 Score=137.42 Aligned_cols=274 Identities=17% Similarity=0.112 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
..+|+.+|+++||+++|++++|||.||++++.+ +..+..+..++..||+.+.+ .++++.+|++++.+|..|.++|+
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~--~~~v~~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAP--VSSSYAACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCc--eecccchhHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999887665 33345678999999997654 78899999999999999999999
Q ss_pred cCCCCeEEEEEeccCcccc-C--------C-------CCc---c------------------------------------
Q 044410 187 NNPGARVLVVCSDIRVLDF-H--------E-------PSE---T------------------------------------ 211 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~~~-~--------~-------~~~---~------------------------------------ 211 (402)
+|..++|||+++|.++..+ . + |.. .
T Consensus 101 sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s~e~~a~v~~~~~~~a~~Np 180 (399)
T PRK06059 101 AGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGATVEDFAQVKVKNARHGLLNP 180 (399)
T ss_pred CCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCc
Confidence 9999999999999865310 0 0 000 0
Q ss_pred --------chh------------hhhhhhhhccCcEEEEEccCCCCCCC---CCCceEEEeeeeeecCCCcccccceeec
Q 044410 212 --------HLD------------VLVVQAVFGDGAGAAIIGADSDISNH---ESPLFQILSCTQTTVPDTENYISGQLKE 268 (402)
Q Consensus 212 --------~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 268 (402)
+.+ ........+|||+|+||.+.+..... ..+...+.+.+... +... ..+. ..
T Consensus 181 ~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~-~~~~--~~~~-~~ 256 (399)
T PRK06059 181 NARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVT-PRYP--QHLP-EL 256 (399)
T ss_pred HhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEec-cccc--cccc-cc
Confidence 000 00122345799999999875431111 11223444332211 0000 0000 00
Q ss_pred CceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc----c------------
Q 044410 269 MGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE----K------------ 331 (402)
Q Consensus 269 ~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e----k------------ 331 (402)
..+........+.........+++++++++|+++ +|| .+=+|-.-....-...+.||+.+. +
T Consensus 257 ~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~-~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~ 335 (399)
T PRK06059 257 PDIATDSTAAVPAPERVFKDQILDAAYAEAGIGP-EDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGR 335 (399)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHcCCCH-HHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCC
Confidence 0000000000011001123457788999999997 999 888887754444445689998753 1
Q ss_pred cHHH-HHHHHhcCCCCcchHHHHHHHHHHhhhhhhcc---c-CCCCCceEEEEEEcccccceeeEEe
Q 044410 332 LWAS-RYVLREYGNMGAPSVFFILDEVRKKSIEEMKA---T-TGEGLECGVLFGFGPGLTVETVVLQ 393 (402)
Q Consensus 332 ~~~~-~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i---~-~G~~~d~vll~~~G~G~~~~~~ll~ 393 (402)
++.| .-=+--+||...++-...+.+++.+.- |+- + +| ..+.+....|.|...++++|+
T Consensus 336 ~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLr--g~ag~~Qv~~--a~~gl~~~~g~~g~~~~~~l~ 398 (399)
T PRK06059 336 IPVNPSGGLACFGEAIPAQAIAQVCELTWQLR--GQAGGRQVEG--ARVGITANQGLFGHGSSVIVA 398 (399)
T ss_pred eeecCCCccccCCccCCccHHHHHHHHHHHhc--cCcCCccCCC--ccEEEEeccCCcccceEEEec
Confidence 1211 001234799999988888888776521 210 0 13 145555444544455666654
No 66
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.57 E-value=2.1e-13 Score=135.46 Aligned_cols=257 Identities=19% Similarity=0.164 Sum_probs=162.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC--CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD--MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~--~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
+..+|+.+|+++||+++|++++|||.+++++ ++ +. .+..+..+++.||+.+.+ +++++.+|+++..++..|.++
T Consensus 23 s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~~~~--~~~v~~~casg~~al~~A~~~ 99 (386)
T PRK08313 23 SMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGATGKP--LIRVHTAGSVGGSTAVVAASL 99 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCCCCc--eEEEeccCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999886 34 21 123347899999998655 789999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCccc-----------cC------------------------------------------CC---
Q 044410 185 AENNPGARVLVVCSDIRVLD-----------FH------------------------------------------EP--- 208 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~~-----------~~------------------------------------------~~--- 208 (402)
|++|.+++||||++|+.+.. |. +|
T Consensus 100 I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A~ 179 (386)
T PRK08313 100 VQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYAH 179 (386)
T ss_pred HHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHHh
Confidence 99999999999999976421 11 01
Q ss_pred -Cc--cchh------------hhhhhhhhccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCcccccceeecCceE
Q 044410 209 -SE--THLD------------VLVVQAVFGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYISGQLKEMGTY 272 (402)
Q Consensus 209 -~~--~~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 272 (402)
.. -+.+ .+.....++|||+|+||.+.+..... ..+...+.+.+...-|.. +.
T Consensus 180 ~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~-----~~------- 247 (386)
T PRK08313 180 LHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLA-----FA------- 247 (386)
T ss_pred cCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcc-----cc-------
Confidence 00 0000 11223456899999999875431100 122334444333211110 00
Q ss_pred EEeCCchhHHHHHhHHHHHHHhhccCCCC--CCcce-EEEEcCCCHHHHHHHHHHcCCCcc----------------ccH
Q 044410 273 CHLSRDVPVAIGNYVDKCLSNAMSPIGIS--DWNSL-FYVVHPGGDGLLDQVEKTLGLRKE----------------KLW 333 (402)
Q Consensus 273 ~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--~~~di-~~i~H~~~~~~~~~~~~~lgi~~e----------------k~~ 333 (402)
.++.+. .......++++++++|++ + +|| .+=+|-......-...+.||+.++ +++
T Consensus 248 ---~~~~~~--~~~~~~a~~~a~~~Agi~~p~-~Did~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~p 321 (386)
T PRK08313 248 ---GRDQVN--PQAGRDAAAALWKAAGITDPR-DEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLP 321 (386)
T ss_pred ---cccccc--cHHHHHHHHHHHHHcCCCCCh-hhCCEEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCcc
Confidence 011111 122346888999999997 5 888 888888766666677899999865 223
Q ss_pred HH--HHHHHhcCCCCcchHHHHHHHHHHhhhhhhcc---c-CCCCCceEEEEEEcccccceeeE
Q 044410 334 AS--RYVLREYGNMGAPSVFFILDEVRKKSIEEMKA---T-TGEGLECGVLFGFGPGLTVETVV 391 (402)
Q Consensus 334 ~~--~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i---~-~G~~~d~vll~~~G~G~~~~~~l 391 (402)
.| =-.+. ||-..++-+..+.++..+.- |.. + ++ .++.+..+.|.+...+.++
T Consensus 322 vN~~GG~l~--g~p~gatG~~~~~e~~~qlr--G~ag~rQv~~--a~~~l~~~~Gg~~~~~~~~ 379 (386)
T PRK08313 322 VNPSGGVLS--SNPIGASGMIRFAEAALQVM--GKAGEHQVDG--ARKALGHAYGGGSQFFSMW 379 (386)
T ss_pred ccCCCcccc--cCCCcHHHHHHHHHHHHHhc--ccccCCcCCC--ccEEEEeccCCcceEEEEE
Confidence 22 00122 77666666777777666421 221 1 23 2566777776443444433
No 67
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.57 E-value=5.6e-14 Score=141.40 Aligned_cols=227 Identities=17% Similarity=0.181 Sum_probs=148.4
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCccE----EEEEecCC-C-------------------CCCCHHHHHHHHcCCCCc
Q 044410 105 LIDEVPKLGKEAALKAIKEWGQPVSKITH----LIFSAFYG-V-------------------DMPGADVRLMRLLGLKPS 160 (402)
Q Consensus 105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~~~-~-------------------~~p~~a~~i~~~LGl~~~ 160 (402)
..+....|+.+|+++||+++|+++++++. +++++..+ + ..+..+..++..+|+...
T Consensus 83 ~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g~ 162 (421)
T cd00833 83 AMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGP 162 (421)
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCCC
Confidence 34556889999999999999999888774 66666432 1 113467889999999763
Q ss_pred cccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------------cCCCCccchhhhhhhhhhcc
Q 044410 161 VNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------------FHEPSETHLDVLVVQAVFGD 224 (402)
Q Consensus 161 ~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------------~~~~~~~~~~~~~~~~lfGD 224 (402)
.+.+..+|++++.||..|..+|++|..+.+||+++|..... ...|.+.. ...+++||
T Consensus 163 ---~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~----~~g~~~ge 235 (421)
T cd00833 163 ---SLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDAD----ADGYVRGE 235 (421)
T ss_pred ---ceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCC----CCCeeeec
Confidence 68899999999999999999999999999999999975310 01222211 23678999
Q ss_pred CcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCC
Q 044410 225 GAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDW 303 (402)
Q Consensus 225 GAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~ 303 (402)
||+|+||++.+.... .......+.+.+.... +... ....+ ....+..+++++|+++|+++
T Consensus 236 GAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~--------------~~~~--~~~~p--~~~~~~~a~~~al~~Agi~~- 296 (421)
T cd00833 236 GVGVVVLKRLSDALRDGDRIYAVIRGSAVNQD--------------GRTK--GITAP--SGEAQAALIRRAYARAGVDP- 296 (421)
T ss_pred eEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCC--------------CCCC--CCcCC--CHHHHHHHHHHHHHHhCCCH-
Confidence 999999997654111 0111223333221100 0000 00011 13455688999999999997
Q ss_pred cce-EEEEcCCCHHH-----HHHHHHHcCCCc---cccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410 304 NSL-FYVVHPGGDGL-----LDQVEKTLGLRK---EKLWASRYVLREYGNMGAPSVFFILDEVR 358 (402)
Q Consensus 304 ~di-~~i~H~~~~~~-----~~~~~~~lgi~~---ek~~~~~~~l~~~Gn~~sasi~i~L~~~~ 358 (402)
+|| ++.+|-.+... .+.+.+.++-.. ..++.+ ..-..+||+.+|+-++.|...+
T Consensus 297 ~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~-s~k~~~Gh~~~aag~~~l~~~~ 359 (421)
T cd00833 297 SDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIG-SVKSNIGHLEAAAGLAGLIKVV 359 (421)
T ss_pred HHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeee-cCcCccccchhhhHHHHHHHHH
Confidence 999 99999765433 334455554321 222221 1234689999998887765543
No 68
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.55 E-value=1.4e-13 Score=137.28 Aligned_cols=252 Identities=14% Similarity=0.103 Sum_probs=161.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCC---CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMP---GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKD 183 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p---~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~ 183 (402)
+..+|+.+|+++||+++|++++|||.++++++.+ ...| .....+...++ ... ++++++.+|++++.++..|.+
T Consensus 31 ~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~-p~~~V~~~CaSg~~ai~~A~~ 107 (394)
T PRK06445 31 RPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNI-PAMAVDRQCASSLTTVSIGAM 107 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCC-cchhhhhhhHHHHHHHHHHHH
Confidence 4789999999999999999999999999998876 3223 22233444444 222 378999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccCccc-c-------C------CCC----cc-------------------chhhh--h-------
Q 044410 184 IAENNPGARVLVVCSDIRVLD-F-------H------EPS----ET-------------------HLDVL--V------- 217 (402)
Q Consensus 184 ~i~~g~~~~vLvv~~e~~s~~-~-------~------~~~----~~-------------------~~~~~--~------- 217 (402)
+|++|.+++|||++.|++|.. + . ++. +. ++++. +
T Consensus 108 ~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~ 187 (394)
T PRK06445 108 EIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQL 187 (394)
T ss_pred HHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 999999999999999977631 0 0 000 00 00000 0
Q ss_pred ---------------------------------------------h--------------hhhhccCcEEEEEccCCCCC
Q 044410 218 ---------------------------------------------V--------------QAVFGDGAGAAIIGADSDIS 238 (402)
Q Consensus 218 ---------------------------------------------~--------------~~lfGDGAaA~vL~~~~~~~ 238 (402)
. .+..+|||+|+||++.+...
T Consensus 188 A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~ 267 (394)
T PRK06445 188 AAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVK 267 (394)
T ss_pred HHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEEEEecHHHHH
Confidence 0 01113333333333222100
Q ss_pred CC-CCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHH
Q 044410 239 NH-ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDG 316 (402)
Q Consensus 239 ~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~ 316 (402)
.. ..+..++.+.+.. .. . +.........+++++|+++|+++ +|| ++=+|-....
T Consensus 268 ~~~~~~~a~i~g~~~~---------------------~~-~-~~~~~~~~~~a~~~al~~Agl~~-~dId~~e~~d~f~~ 323 (394)
T PRK06445 268 KYGLKPMAKIRSFGFA---------------------GV-P-PAIMGKGPVPASKKALEKAGLSV-KDIDLWEINEAFAV 323 (394)
T ss_pred HCCCCceEEEEEEEEe---------------------cc-C-CchhcchHHHHHHHHHHHcCCCH-HHcCEEEecccchH
Confidence 00 0001112111110 00 0 11112234578899999999997 999 9999988777
Q ss_pred HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410 317 LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 317 ~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
..-...+.||++++++..+ --.--+||...|+-...+.+++.+. +++.+ .+.+....|.|..-.+++|+.
T Consensus 324 ~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL----~~~~~---~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 324 VVLYAIKELGLDPETVNIK-GGAIAIGHPLGATGARIVGTLARQL----QIKGK---DYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred HHHHHHHHhCCCccccCCC-CCHHHcCCCccchHHHHHHHHHHHH----HhcCC---CEEEEEEcccCChhhEEEEEc
Confidence 7777789999998776543 2244589999999888888888761 12333 677777777777777888764
No 69
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.55 E-value=1.3e-13 Score=138.37 Aligned_cols=261 Identities=15% Similarity=0.146 Sum_probs=166.7
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC----------------------C----CCC-CHHHHHHHH
Q 044410 106 IDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG----------------------V----DMP-GADVRLMRL 154 (402)
Q Consensus 106 ~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~----------------------~----~~p-~~a~~i~~~ 154 (402)
.+....|+..|+++||+++|++++++| .++++++.. + ..+ ..+.++...
T Consensus 69 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 148 (411)
T PRK07314 69 MDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIR 148 (411)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHH
Confidence 345678999999999999999998888 567665421 1 111 256789999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----c----------------CCCCccch
Q 044410 155 LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----F----------------HEPSETHL 213 (402)
Q Consensus 155 LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----~----------------~~~~~~~~ 213 (402)
+|+... .+.+..+|++++.||..|..+|++|..+.|||+++|..+.. | ..|.+.++
T Consensus 149 ~gl~Gp---~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~ 225 (411)
T PRK07314 149 YGAKGP---NHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR 225 (411)
T ss_pred hCCCCc---cccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC
Confidence 999764 57788999999999999999999999999999999864311 0 01222111
Q ss_pred hhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410 214 DVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS 292 (402)
Q Consensus 214 ~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 292 (402)
..+++||||+|+||++.+.... .......+.+.+... ++..+.. ... .......+++
T Consensus 226 ----dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~--------------d~~~~~~-~~~---~~~~~~~a~~ 283 (411)
T PRK07314 226 ----DGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTG--------------DAYHMTA-PAP---DGEGAARAMK 283 (411)
T ss_pred ----CCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--------------CCCCCCC-CCC---CcHHHHHHHH
Confidence 3578999999999987543110 011123444332210 0000000 000 0122346888
Q ss_pred HhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410 293 NAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK 366 (402)
Q Consensus 293 ~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~ 366 (402)
++|+++|+++ +|| ++..|-.+... .+.+.+.++....+++.+ ..-..+||+.+|+-.+.|...+.. +.+|.
T Consensus 284 ~Al~~agi~~-~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~i~~~l~-l~~~~ 360 (411)
T PRK07314 284 LALKDAGINP-EDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVS-STKSMTGHLLGAAGAVEAIFSVLA-IRDQV 360 (411)
T ss_pred HHHHHcCCCH-HHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeE-CccchhchhHHHHHHHHHHHHHHH-HhCCC
Confidence 9999999997 999 99999766533 344556666544454432 123467999888766665443321 11133
Q ss_pred ccC-----------------C----CCCceEEEEEEcccccceeeEEee
Q 044410 367 ATT-----------------G----EGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 367 i~~-----------------G----~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
+.| + .+.++++.-+||-|.+-++++|+.
T Consensus 361 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 361 IPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred cCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEec
Confidence 221 0 012568889999999999999875
No 70
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.55 E-value=1.9e-13 Score=137.56 Aligned_cols=259 Identities=17% Similarity=0.163 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcc------------------EEEEEec---------------CC--------CCCCCH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKIT------------------HLIFSAF---------------YG--------VDMPGA 147 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId------------------~li~~s~---------------~~--------~~~p~~ 147 (402)
...|+..|+++||+++|++..+++ .++.++. .+ ...|..
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 456889999999999998643322 1122111 11 134568
Q ss_pred HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecc---------------Cccc------cC
Q 044410 148 DVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI---------------RVLD------FH 206 (402)
Q Consensus 148 a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~---------------~s~~------~~ 206 (402)
+.+|+..+|++.. .+++..+|++++.||..|.++|++|.++.+||+++|. .+.. ..
T Consensus 155 a~~i~~~~gl~G~---~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 231 (425)
T PRK06501 155 ADRLADRFGTRGL---PISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231 (425)
T ss_pred HHHHHHHhCCCCC---ceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence 8999999999764 6889999999999999999999999999999999994 1210 01
Q ss_pred CCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCC-CceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHH
Q 044410 207 EPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHES-PLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGN 285 (402)
Q Consensus 207 ~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~ 285 (402)
.|.|.++ ..+++||||+|+||++.+....... ....+.+.+.. .+. .+. ....+ -..
T Consensus 232 rpfd~~r----~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~----~d~----------~~~--~~~~~--~~~ 289 (425)
T PRK06501 232 KPFSKDR----DGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEK----ADS----------FHR--TRSSP--DGS 289 (425)
T ss_pred CCCCCCC----CCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEc----cCC----------CCC--CCCCC--CHH
Confidence 1222222 3589999999999998654110001 11123222211 000 000 00000 023
Q ss_pred hHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 044410 286 YVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK 359 (402)
Q Consensus 286 ~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~ 359 (402)
.+.++++++|+++|+++ +|| ++.+|-.+....+. +.+.++-...+++.+ ..-..+||+.+|+-.+.+...+.
T Consensus 290 ~~~~ai~~AL~~agi~p-~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~-s~k~~~Gh~~~AsG~~~~~~~~l 367 (425)
T PRK06501 290 PAIGAIRAALADAGLTP-EQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVS-SNKSMIGHTLTAAGAVEAVFSLL 367 (425)
T ss_pred HHHHHHHHHHHHcCCCH-HHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEE-CCCcccCCCchhhhHHHHHHHHH
Confidence 46688999999999997 999 99999877655444 344555322233331 12346799998887766644322
Q ss_pred hhhhhhcccC-----------------C----CCCceEEEEEEcccccceeeEEeee
Q 044410 360 KSIEEMKATT-----------------G----EGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 360 ~~~~~g~i~~-----------------G----~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
. +.+|.+.+ . .+.+.++.-+||-|.+-.+++|+..
T Consensus 368 ~-l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~ 423 (425)
T PRK06501 368 T-IQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAE 423 (425)
T ss_pred H-HhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecC
Confidence 1 11133221 0 0124577888999999999998754
No 71
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.54 E-value=7.7e-13 Score=132.66 Aligned_cols=259 Identities=14% Similarity=0.153 Sum_probs=166.0
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C-------------------------CCC-CHHHHHHH
Q 044410 105 LIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V-------------------------DMP-GADVRLMR 153 (402)
Q Consensus 105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~-------------------------~~p-~~a~~i~~ 153 (402)
..+....++..|+++||+++|+++.+.+ .|+++++.. + .++ ..+.+|..
T Consensus 70 ~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 149 (414)
T PRK08722 70 KMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSI 149 (414)
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHH
Confidence 3345667899999999999999764433 456665421 0 112 36788999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c----------CCCCccc
Q 044410 154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F----------HEPSETH 212 (402)
Q Consensus 154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~----------~~~~~~~ 212 (402)
.+|++.. .+.+..+|++++.||..|..+|++|..+.+||+++|..... + ..|.|.+
T Consensus 150 ~~gl~Gp---~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~ 226 (414)
T PRK08722 150 MRGLRGP---NIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKD 226 (414)
T ss_pred HhCCCCC---ccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCC
Confidence 9999975 67899999999999999999999999999999999975321 0 0122222
Q ss_pred hhhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHH
Q 044410 213 LDVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL 291 (402)
Q Consensus 213 ~~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 291 (402)
+ ..++.||||+++||++.+.... ......++.+.+.. + ++.++. .+.. .......++
T Consensus 227 ~----~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~----~----------d~~~~~-~p~~---~~~~~~~a~ 284 (414)
T PRK08722 227 R----DGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMS----G----------DAYHMT-SPSE---DGSGGALAM 284 (414)
T ss_pred C----CceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEc----C----------CCCCCC-CCCc---chHHHHHHH
Confidence 2 4678999999999997654111 01112234332211 0 110000 0110 112345678
Q ss_pred HHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCC-ccccHHHHHHHHhcCCCCcchHHHHHHHH---HHhh
Q 044410 292 SNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLR-KEKLWASRYVLREYGNMGAPSVFFILDEV---RKKS 361 (402)
Q Consensus 292 ~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~-~ek~~~~~~~l~~~Gn~~sasi~i~L~~~---~~~~ 361 (402)
+++|+++|+++ +|| ++-.|-.+.. -.+.+.+.+|-. .++++.+ .+-..+||+.+|+-.+.|... +++
T Consensus 285 ~~Al~~agi~~-~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~l~~- 361 (414)
T PRK08722 285 EAAMRDAGVTG-EQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVS-STKSMTGHLLGAAGSVEAIITVMSLVD- 361 (414)
T ss_pred HHHHHHcCCCH-HHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceee-CcccccccchHHHHHHHHHHHHHHHhc-
Confidence 89999999997 999 9999976543 344566677632 2334432 134578999998877666433 222
Q ss_pred hhhhcccC-----------------C-----CCCceEEEEEEcccccceeeEEee
Q 044410 362 IEEMKATT-----------------G-----EGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 362 ~~~g~i~~-----------------G-----~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
|.+.| . .+..+++.-+||-|.+-++++|+.
T Consensus 362 ---~~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 362 ---QIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred ---CccCCCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 22211 0 012567888999999999988863
No 72
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.53 E-value=2.6e-13 Score=134.83 Aligned_cols=94 Identities=16% Similarity=0.102 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-C-CCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-V-DMPGADVRLMRLLGLKP-SVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~-~~p~~a~~i~~~LGl~~-~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
+..+|+.+|+++||+++|+.++|||.++++++.+ . ..+..+.+++..+|++. .+ ++.++++|+|++.|+..|..+
T Consensus 26 ~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p--~~~V~~aCaSG~~Al~~A~~~ 103 (391)
T PRK07661 26 RPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVP--AITINRYCSSGLQSIAYGAER 103 (391)
T ss_pred CHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcc--eeehhhhhhHHHHHHHHHHHH
Confidence 3789999999999999998889999999998776 2 24677788999999985 43 889999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCcc
Q 044410 185 AENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~ 203 (402)
|++|..+.+||+++|++|.
T Consensus 104 I~sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 104 IMLGHSEAVIAGGAESMSL 122 (391)
T ss_pred HHcCCCCEEEEEEEeeccc
Confidence 9999999999999998863
No 73
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.53 E-value=1.9e-12 Score=132.97 Aligned_cols=261 Identities=15% Similarity=0.149 Sum_probs=164.5
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCC---cc----EEEEEecCC---------------------CCCC-----CHHHHH
Q 044410 105 LIDEVPKLGKEAALKAIKEWGQPVSK---IT----HLIFSAFYG---------------------VDMP-----GADVRL 151 (402)
Q Consensus 105 ~~~~~~~la~~Aa~~aL~~ag~~~~d---Id----~li~~s~~~---------------------~~~p-----~~a~~i 151 (402)
..+....++..|+++||+++|++++. ++ .|++++..+ +..| ..+.+|
T Consensus 195 ~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i 274 (540)
T PLN02787 195 RMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAML 274 (540)
T ss_pred hCCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHH
Confidence 33445679999999999999997542 21 466666531 0011 235688
Q ss_pred HHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c----------CCCCc
Q 044410 152 MRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F----------HEPSE 210 (402)
Q Consensus 152 ~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~----------~~~~~ 210 (402)
+..+|+... .+.+..+|++++.||..|.++|++|..+.+||.++|..... + ..|.|
T Consensus 275 a~~~gl~Gp---~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD 351 (540)
T PLN02787 275 AMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWD 351 (540)
T ss_pred HHHhCCCCC---ccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcc
Confidence 999999875 57899999999999999999999999999999999963110 0 12333
Q ss_pred cchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHH
Q 044410 211 THLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDK 289 (402)
Q Consensus 211 ~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 289 (402)
.++ ..+++|+||+++||++.+... .......++.+.+.. .+++++.. +.--...+..
T Consensus 352 ~~r----dGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s--------------~Da~~~t~----p~p~g~g~~~ 409 (540)
T PLN02787 352 MNR----DGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFT--------------CDAYHMTE----PHPEGAGVIL 409 (540)
T ss_pred cCC----CCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEe--------------cCCCCCCC----CCcCHHHHHH
Confidence 222 478999999999999754411 101112234433211 11111110 0001233557
Q ss_pred HHHHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhh
Q 044410 290 CLSNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIE 363 (402)
Q Consensus 290 ~i~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~ 363 (402)
+|+++|+++|+++ +|| |+..|-.+.. -...+.+.+|-.+ .++.+ .+-..+||+.+|+-.+.+...+.. +.
T Consensus 410 am~~AL~~AGl~p-~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~pV~-S~Ks~iGH~~gAAGa~eli~~~la-l~ 485 (540)
T PLN02787 410 CIEKALAQSGVSK-EDVNYINAHATSTKAGDLKEYQALMRCFGQNP-ELRVN-STKSMIGHLLGAAGAVEAIATVQA-IR 485 (540)
T ss_pred HHHHHHHHcCCCH-HHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-Cceee-CCCCCcCCCcccchHHHHHHHHHH-Hh
Confidence 8899999999997 999 9999976544 3455667777422 23322 134578999988866655443321 00
Q ss_pred hhcccCC------------------C----CCceEEEEEEcccccceeeEEee
Q 044410 364 EMKATTG------------------E----GLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 364 ~g~i~~G------------------~----~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
+|.+.|- . +.+.+|.-+||-|..-++++|+.
T Consensus 486 ~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 486 TGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred cCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 1332210 0 11456778999999888998874
No 74
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=1.2e-12 Score=130.05 Aligned_cols=95 Identities=8% Similarity=-0.032 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
++.+|+.+|++++|+++|++++|||.+++++... .. ....+..+...+|++... +++.++++|+|++.|+..|.+.|
T Consensus 25 ~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~-p~~tV~~~CaSG~~A~~~A~~~I 103 (387)
T PRK07850 25 HAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV-GATTIDCQCGSAQQANHLVAGLI 103 (387)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC-ceEEEecccccHHHHHHHHHHHH
Confidence 3789999999999999999999999999987654 22 244566777889998533 28899999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 104 AAGAIDVGIACGVEAMSR 121 (387)
T ss_pred HCCCCCEEEEEeEecCCC
Confidence 999999999999999874
No 75
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.51 E-value=3.8e-13 Score=134.43 Aligned_cols=94 Identities=12% Similarity=0.022 Sum_probs=81.5
Q ss_pred hHHHHHHHHHHHHHHHc-CCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEW-GQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
+..+|+.+|+++||+++ |++++|||.+++++..+ ...+..+..++..+|+.+.+ ++.++.+|+++..++..|.++
T Consensus 26 ~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p--~~~v~~~caSG~~av~~Aa~~ 103 (406)
T PRK07851 26 RPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLP--GTTVNRYCSSSLQTTRMAFHA 103 (406)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCC--eeeeeccchhHHHHHHHHHHH
Confidence 47899999999999997 99999999999876544 22356678899999997543 788999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCcc
Q 044410 185 AENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~ 203 (402)
|++|.++.|||+++|++|.
T Consensus 104 I~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 104 IKAGEGDVFISAGVETVSR 122 (406)
T ss_pred HHCCCCCEEEEeeEEeccc
Confidence 9999999999999998653
No 76
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.51 E-value=7.3e-13 Score=131.27 Aligned_cols=95 Identities=12% Similarity=0.007 Sum_probs=87.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
++.+|+..+++.+|+++++++++||.||+++..+ -. .+.++.+.+-..|++..+. ++.++..|+|++.|+.+|.+.|
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp-~~tvnr~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKAS-GVTLDRFCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCC-eeeeccccchHHHHHHHHHHHH
Confidence 3889999999999999999999999999999877 32 4789999999999998764 9999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|..+.+|+.+.|.+|.
T Consensus 107 ~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999984
No 77
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.50 E-value=1e-12 Score=132.59 Aligned_cols=263 Identities=15% Similarity=0.147 Sum_probs=165.7
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCc-c----EEEEEecCC----------------------CCCC-----CHHHH
Q 044410 103 AMLIDEVPKLGKEAALKAIKEWGQPVSKI-T----HLIFSAFYG----------------------VDMP-----GADVR 150 (402)
Q Consensus 103 ~~~~~~~~~la~~Aa~~aL~~ag~~~~dI-d----~li~~s~~~----------------------~~~p-----~~a~~ 150 (402)
.+..+....|+..|+++||+++|++++++ + .|+++++.. +..+ ..+.+
T Consensus 76 ~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 155 (424)
T PRK06333 76 QRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGH 155 (424)
T ss_pred HhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHH
Confidence 33445567899999999999999987766 2 566665421 1111 24678
Q ss_pred HHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c-----------CCC
Q 044410 151 LMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----------HEP 208 (402)
Q Consensus 151 i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-----------~~~ 208 (402)
|+..+|+... .+.+..+|++++.||..|..+|++|.++.+||+++|..... + .+|
T Consensus 156 is~~~gl~Gp---~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~P 232 (424)
T PRK06333 156 VSIRYGFKGP---LGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRP 232 (424)
T ss_pred HHHHhCCCCC---CccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCC
Confidence 9999999764 67889999999999999999999999999999999973210 0 112
Q ss_pred CccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhH
Q 044410 209 SETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYV 287 (402)
Q Consensus 209 ~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~ 287 (402)
.+.++ ..++.||||+++||++.+... .......++.+.+... ++.++.. +. + -....
T Consensus 233 fd~~~----~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~--------------d~~~~~~-~~-~--~~~~~ 290 (424)
T PRK06333 233 FDRDR----DGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSA--------------DAYHMTA-GP-E--DGEGA 290 (424)
T ss_pred CCCCC----CCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--------------CCCCCCC-CC-C--CcHHH
Confidence 22222 357899999999999754311 1011122343332210 1100000 00 0 12345
Q ss_pred HHHHHHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhh
Q 044410 288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKS 361 (402)
Q Consensus 288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~ 361 (402)
.++++++|+++|+++ +|| ++..|-.+.. -...+.+.++- ...++.+ .....+||+.+|+-.+.+...+..
T Consensus 291 ~~a~~~Al~~Agi~p-~dId~i~~hgtgt~~~D~~E~~al~~~fg~-~~~~~v~-s~K~~~GH~~gAaG~~~~~~~~l~- 366 (424)
T PRK06333 291 RRAMLIALRQAGIPP-EEVQHLNAHATSTPVGDLGEVAAIKKVFGH-VSGLAVS-STKSATGHLLGAAGGVEAIFTILA- 366 (424)
T ss_pred HHHHHHHHHHcCCCH-HHCCEEeccCCCCccchHHHHHHHHHHhCC-CCCceeE-CcccchhhhHHHHHHHHHHHHHHH-
Confidence 678899999999997 999 9999976644 34556677772 2233332 135678999888765554433221
Q ss_pred hhhhcccC------------------C----CCCceEEEEEEcccccceeeEEee
Q 044410 362 IEEMKATT------------------G----EGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 362 ~~~g~i~~------------------G----~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
+.+|.+.| + .+.++++..+||.|.+..+++|+.
T Consensus 367 l~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~ 421 (424)
T PRK06333 367 LRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRR 421 (424)
T ss_pred HhcCCcCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEEEec
Confidence 11122111 0 011567888999999988888874
No 78
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.48 E-value=2.1e-12 Score=130.16 Aligned_cols=95 Identities=7% Similarity=-0.031 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCC-HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPG-ADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~-~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
+..+|+.+|+++||+++|++++|||.||+++..+ ...+. .+..++..+|++... +++.++.+|+++..++..|...|
T Consensus 70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~-pa~~V~~~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAI 148 (452)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCc-ceEEEeccCchHHHHHHHHHHHH
Confidence 4789999999999999999999999999988766 44343 445677788998633 27899999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|.++.|||++.|++|.
T Consensus 149 ~sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 149 KAGFYDIGIGAGVESMTT 166 (452)
T ss_pred HcCCCCeEEEEeEEecCC
Confidence 999999999999998763
No 79
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.48 E-value=1.9e-12 Score=128.97 Aligned_cols=94 Identities=16% Similarity=0.103 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|++++|+++|++++|||.|++++... ...+..+..++..+|++.... +..++.+|+++..++..|.+.|+
T Consensus 24 ~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p-~~~v~~~caSg~~av~~Aa~~I~ 102 (394)
T PLN02644 24 SATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTI-CTTVNKVCASGMKAVMLAAQSIQ 102 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCc-eEEEeccchHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999876543 223345567889999975332 67789999999999999999999
Q ss_pred cCCCCeEEEEEeccCc
Q 044410 187 NNPGARVLVVCSDIRV 202 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s 202 (402)
+|.++.|||++.|.+|
T Consensus 103 sG~~d~vlv~G~E~~s 118 (394)
T PLN02644 103 LGINDVVVAGGMESMS 118 (394)
T ss_pred cCCCCEEEEEeEEecC
Confidence 9999999999988775
No 80
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.48 E-value=1.3e-12 Score=129.48 Aligned_cols=95 Identities=12% Similarity=0.068 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
++.+|+..|++++|+++|+++++||.|++++..+ ......+.+++..+|++... +++.++.+|++++.|+..|.++|+
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~-p~~~V~~~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEV-PGYTINKVCGSGLKSVALAANSIM 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCc-cchhhcchhHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999998765 33346677788999998533 288999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcc
Q 044410 187 NNPGARVLVVCSDIRVL 203 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~ 203 (402)
+|..+.+|+++.|++|.
T Consensus 105 sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 105 TGDNEIVIAGGQENMSL 121 (392)
T ss_pred cCCCCEEEEcccccCCC
Confidence 99999999999999874
No 81
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.48 E-value=8.5e-12 Score=123.96 Aligned_cols=234 Identities=17% Similarity=0.045 Sum_probs=149.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-V-DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~-~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
+..+|+.+|+++||+++|++++|||.+++++... + ..+..+..+++.||+.+.+ ++.++++|+++..+|..|.++|
T Consensus 28 ~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~--~~~V~~~gasG~~al~~A~~~I 105 (392)
T PRK06065 28 TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKP--VSRVYVGGATGVMTAIAGWYHV 105 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCC--eEEEecCchhHHHHHHHHHHHH
Confidence 3789999999999999999999999999875322 2 2456788899999997654 7889999999999999999999
Q ss_pred HcCCCCeEEEEEeccCccc---------------cCC------------------------------------------C
Q 044410 186 ENNPGARVLVVCSDIRVLD---------------FHE------------------------------------------P 208 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~~---------------~~~------------------------------------------~ 208 (402)
++|..++||||++|+++.. |.. |
T Consensus 106 ~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~NP 185 (392)
T PRK06065 106 ASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALNNP 185 (392)
T ss_pred hCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhccCc
Confidence 9999999999999984210 100 1
Q ss_pred Ccc-----chh------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCce
Q 044410 209 SET-----HLD------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGT 271 (402)
Q Consensus 209 ~~~-----~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 271 (402)
.-. +.+ .+..+...+|||+|+||.+.+...........+.+.+...-+.. +..
T Consensus 186 ~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v~I~g~~~~~~~~~-----~~~----- 255 (392)
T PRK06065 186 YAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTPVWVEGVGWTLDNTE-----WPN----- 255 (392)
T ss_pred hhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEEEecCccc-----ccc-----
Confidence 000 000 11223456899999999875431110011223443332211110 000
Q ss_pred EEEeCCchhHHHHHhHHHHHHHhhccCCCCC-Ccce-EEEEcCCCHHHHHHHHHHcCCCcc----------------ccH
Q 044410 272 YCHLSRDVPVAIGNYVDKCLSNAMSPIGISD-WNSL-FYVVHPGGDGLLDQVEKTLGLRKE----------------KLW 333 (402)
Q Consensus 272 ~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~-~~di-~~i~H~~~~~~~~~~~~~lgi~~e----------------k~~ 333 (402)
++.. .........+++++++|+++ .+|+ .+=+|-.-..+.-...+.||+.+. +++
T Consensus 256 -----~~~~--~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~p 328 (392)
T PRK06065 256 -----RDLA--YPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIP 328 (392)
T ss_pred -----cccc--ccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCee
Confidence 0000 11122357788999999973 2778 777887755555556688886542 111
Q ss_pred HHH-HHHHhcCCCCcchHHHHHHHHHHh
Q 044410 334 ASR-YVLREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 334 ~~~-~~l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
.|. --+-.+||...++-+..+.++.++
T Consensus 329 vN~~GG~la~Ghp~gatG~~~~~e~~~Q 356 (392)
T PRK06065 329 SSPSGGLLGVGNPIAAAGLMKVISIYWQ 356 (392)
T ss_pred ecCCCccccCCCCccHHHHHHHHHHHHH
Confidence 110 001237999988888888887765
No 82
>PRK06158 thiolase; Provisional
Probab=99.47 E-value=3.3e-12 Score=126.89 Aligned_cols=228 Identities=15% Similarity=0.096 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g 188 (402)
..+|+.+|+++||+++|++++|||.+++++.. ...|. ..+++.||+++.+ ..++..+|+++..+|..|.++|++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~-~~~~~--~~la~~lGl~~~~--~~~~~~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASPD-DALWG--LSVAEYLGIRPRF--VDGTMIGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CCCcH--HHHHHHcCCCCee--eccccCccHHHHHHHHHHHHHHHcC
Confidence 78999999999999999999999999987642 23343 5799999998764 6788999999999999999999999
Q ss_pred CCCeEEEE-EeccCcc-----c------cC-------------------------------------------CCCc---
Q 044410 189 PGARVLVV-CSDIRVL-----D------FH-------------------------------------------EPSE--- 210 (402)
Q Consensus 189 ~~~~vLvv-~~e~~s~-----~------~~-------------------------------------------~~~~--- 210 (402)
.+++|||+ +.++.+. . |. +|.-
T Consensus 103 ~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~~~ 182 (384)
T PRK06158 103 LCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAFMR 182 (384)
T ss_pred CCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhhhC
Confidence 99999998 4443321 0 10 0100
Q ss_pred --cchh------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeC
Q 044410 211 --THLD------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLS 276 (402)
Q Consensus 211 --~~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 276 (402)
-+.+ .+...+..+|||+|+||.+.+...........+.+.+...... .+. ..
T Consensus 183 ~~~t~e~vl~s~~ia~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~v~i~g~~~~~~~~-----~~~---------~~ 248 (384)
T PRK06158 183 DPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPPVYVLGAAAATWHR-----QIS---------SM 248 (384)
T ss_pred CCCCHHHHhcCCccCCCCchhhcCCccCCeEEEEEecHHHHhhcCCCcEEEEEEEEecCCc-----ccc---------cc
Confidence 0000 1123446899999999987653111101123333332211000 000 00
Q ss_pred CchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc----------------ccHHH-HHH
Q 044410 277 RDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE----------------KLWAS-RYV 338 (402)
Q Consensus 277 ~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e----------------k~~~~-~~~ 338 (402)
.++. ......+++++++++|+++ +|| ++=+|-.-...--...+.||+.+. +++.| --=
T Consensus 249 ~~~~---~~~~~~aa~~A~~~AGi~p-~DId~~ElyD~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG 324 (384)
T PRK06158 249 PDLT---VTAAAESGPRAFAMAGLTP-ADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGG 324 (384)
T ss_pred cchh---hhHHHHHHHHHHHHcCCCH-HHCcEEEecCCchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCCh
Confidence 1111 1223468889999999997 999 888888766666667799998754 12221 000
Q ss_pred HHhcCCCCcchHHHHHHHHHHh
Q 044410 339 LREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 339 l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
+-.+||. .++-+..+.++..+
T Consensus 325 ~ls~Ghp-gatG~~~~~E~~~Q 345 (384)
T PRK06158 325 GLSCVHP-GMYGLFLLIEAVRQ 345 (384)
T ss_pred hhcCCCC-chhhHHHHHHHHHH
Confidence 2236888 45556666666554
No 83
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.47 E-value=1.5e-12 Score=129.66 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHH-HHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADV-RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~-~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
.+.+|+.+|+++||++++++++|||.||+++..+ +..+..+. .+++.+|+...+ +++++.+|+|++.++..|..+|
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p--~~~V~~~Casg~~al~~A~~~I 99 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAP--AIGMNNLCGSGLRALALAMQLI 99 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCc--EEEecchhHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998877 44455555 367888887655 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|..+.+||+++|++|.
T Consensus 100 ~sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 100 AGGDANCILAGGFEKMET 117 (393)
T ss_pred HCCCCCEEEEEeeecccc
Confidence 999999999999999863
No 84
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.46 E-value=1.4e-12 Score=130.77 Aligned_cols=256 Identities=12% Similarity=0.099 Sum_probs=159.6
Q ss_pred hHHHHHHHHHHHHHHHcCCC---CCCccEEEEEecC---------------C-CC--------CC-CHHHHHHHHcCCCC
Q 044410 108 EVPKLGKEAALKAIKEWGQP---VSKITHLIFSAFY---------------G-VD--------MP-GADVRLMRLLGLKP 159 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~---~~dId~li~~s~~---------------~-~~--------~p-~~a~~i~~~LGl~~ 159 (402)
....|+..|+++||+++|++ +++|+.++.++.. + +. ++ ..+.+|+..||+..
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G 158 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG 158 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC
Confidence 46789999999999999986 4566655543320 1 11 11 25678889999976
Q ss_pred ccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC-cc----------------------ccCCCCccchhhh
Q 044410 160 SVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VL----------------------DFHEPSETHLDVL 216 (402)
Q Consensus 160 ~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~-s~----------------------~~~~~~~~~~~~~ 216 (402)
. .+.+..+|++++.||..|.++|++|..+.+||+++|.. +. ....|.|.++
T Consensus 159 ~---~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--- 232 (410)
T PRK07103 159 E---GFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--- 232 (410)
T ss_pred C---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC---
Confidence 4 57799999999999999999999999999999988631 10 0011333222
Q ss_pred hhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhh
Q 044410 217 VVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAM 295 (402)
Q Consensus 217 ~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 295 (402)
..+++||||+++||++.+... .......++.+.+... ++.+.. .+. .....++++++|
T Consensus 233 -dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~--------------d~~~~~-~p~-----~~~~~~a~~~Al 291 (410)
T PRK07103 233 -DGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRL--------------DANRGP-DPS-----LEGEMRVIRAAL 291 (410)
T ss_pred -CCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEec--------------CCCCCC-CCC-----HHHHHHHHHHHH
Confidence 368999999999999765411 0001123444433211 010000 011 122457888999
Q ss_pred ccCCCCCCcce-EEEEcCCCHHHHHHHH-HH-cCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccC---
Q 044410 296 SPIGISDWNSL-FYVVHPGGDGLLDQVE-KT-LGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT--- 369 (402)
Q Consensus 296 ~~~gl~~~~di-~~i~H~~~~~~~~~~~-~~-lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~--- 369 (402)
+++|+++ +|| ++..|-.+....+.++ +. ++.....++.+ .+-..+||+.+|+-.+.|...+.. +.+|.+.|
T Consensus 292 ~~Agi~~-~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~l~-l~~~~ipp~~~ 368 (410)
T PRK07103 292 RRAGLGP-EDIDYVNPHGTGSPLGDETELAALFASGLAHAWIN-ATKSLTGHGLSAAGIVELIATLLQ-MRAGFLHPSRN 368 (410)
T ss_pred HHcCCCH-HHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeEE-CCCcccccCchhhhHHHHHHHHHH-HhCCeeCCCCC
Confidence 9999997 999 9999987665433321 11 22222223322 123467999999888877654321 11132211
Q ss_pred -------------C----CCCceEEEEEEcccccceeeEEe
Q 044410 370 -------------G----EGLECGVLFGFGPGLTVETVVLQ 393 (402)
Q Consensus 370 -------------G----~~~d~vll~~~G~G~~~~~~ll~ 393 (402)
. ....+++..+||.|.+-.+++|+
T Consensus 369 ~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 369 LDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred CCCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 0 01257788899999999999886
No 85
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.46 E-value=2.9e-12 Score=125.64 Aligned_cols=222 Identities=15% Similarity=0.197 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g 188 (402)
+.+|+..|++++++ |++ ++||.|++++..+. ....+..+...+|++... +.+.++.+|++++.++..|.++|++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~-p~~tV~~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHI-PGVTIDRQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCC-CceehhhhhhHHHHHHHHHHHHHHCC
Confidence 78999999999865 886 89999999987542 244555688999998333 28899999999999999999999999
Q ss_pred CCCeEEEEEeccCccc-cC-CC-------Ccc---------------chhh-----------------------------
Q 044410 189 PGARVLVVCSDIRVLD-FH-EP-------SET---------------HLDV----------------------------- 215 (402)
Q Consensus 189 ~~~~vLvv~~e~~s~~-~~-~~-------~~~---------------~~~~----------------------------- 215 (402)
..+.+|+++.|.+|.. +. .. .+. ++++
T Consensus 100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~ 179 (361)
T PRK06690 100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN 179 (361)
T ss_pred CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence 9999999999998741 10 00 000 0000
Q ss_pred ------h-h--------h--hhh--------------hccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCccccc
Q 044410 216 ------L-V--------V--QAV--------------FGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYIS 263 (402)
Q Consensus 216 ------~-~--------~--~~l--------------fGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~ 263 (402)
. . . ..+ .+|||+|+||.+.+..... ..+..++.+.+...
T Consensus 180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~--------- 250 (361)
T PRK06690 180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVG--------- 250 (361)
T ss_pred CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEec---------
Confidence 0 0 0 011 2566666666554320000 01122233221110
Q ss_pred ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHH---HHHH
Q 044410 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWAS---RYVL 339 (402)
Q Consensus 264 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~---~~~l 339 (402)
.....+ ......+++++|+++|+++ +|| +|.+|+..........+.||++++++..+ ....
T Consensus 251 -----------~~~~~~---~~~~~~a~~~al~~Agl~~-~Did~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~G 315 (361)
T PRK06690 251 -----------VDPNLP---GTGPIFAVNKLLNEMNMKV-EDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALG 315 (361)
T ss_pred -----------cCcccc---hhHHHHHHHHHHHHcCCCH-HHcCEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhcc
Confidence 001111 1234568889999999997 999 99999999999999999999998766541 0013
Q ss_pred HhcCCCCcchHHHHHHHHHH
Q 044410 340 REYGNMGAPSVFFILDEVRK 359 (402)
Q Consensus 340 ~~~Gn~~sasi~i~L~~~~~ 359 (402)
+.+|++|...++..+.++.+
T Consensus 316 hp~GatG~~~~~~~~~ql~~ 335 (361)
T PRK06690 316 HPYGASGAMLVTRLFYQAKR 335 (361)
T ss_pred CchhhhHHHHHHHHHHHHHH
Confidence 45677777776666666544
No 86
>PRK08256 lipid-transfer protein; Provisional
Probab=99.46 E-value=5.3e-12 Score=125.89 Aligned_cols=260 Identities=15% Similarity=0.106 Sum_probs=162.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~ 187 (402)
+..+|+.+|+++||+++|++++|||.+++++..+.... ...++..+|+...+ .+.++.+|++++.+|..|.++|++
T Consensus 21 ~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~~~~--~~~v~~~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 21 DYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMTGIP--IVNVNNNCSTGSTALFLARQAVRS 96 (391)
T ss_pred CHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCCCCC--CcccccccHHHHHHHHHHHHHHHC
Confidence 37899999999999999999999999988776552221 23467789997644 678999999999999999999999
Q ss_pred CCCCeEEEEEeccCccc-c---------------------CCCC-c---c------------------------------
Q 044410 188 NPGARVLVVCSDIRVLD-F---------------------HEPS-E---T------------------------------ 211 (402)
Q Consensus 188 g~~~~vLvv~~e~~s~~-~---------------------~~~~-~---~------------------------------ 211 (402)
|..++|||+++|+++.. + ..+. . .
T Consensus 97 G~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~ 176 (391)
T PRK08256 97 GAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARR 176 (391)
T ss_pred CCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999987520 0 0000 0 0
Q ss_pred --------------chh------------hhhhhhhhccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCcccccc
Q 044410 212 --------------HLD------------VLVVQAVFGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYISG 264 (402)
Q Consensus 212 --------------~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~ 264 (402)
+.+ ........+|||+|+||.+.+..... ..+..++.+.+....... .+
T Consensus 177 ~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~--~~-- 252 (391)
T PRK08256 177 HAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPS--TF-- 252 (391)
T ss_pred hhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccc--cc--
Confidence 000 00112234788888888765431110 012234443222110000 00
Q ss_pred eeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc-------------
Q 044410 265 QLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE------------- 330 (402)
Q Consensus 265 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e------------- 330 (402)
. ..+. .... ........++++++++|+++ +|| .+-+|..-....-...+.||+.++
T Consensus 253 ~-~~~~------~~~~--~~~~~~~a~~~a~~~ag~~~-~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~ 322 (391)
T PRK08256 253 D-GRSM------IDLV--GYDMTRAAAQQVYEQAGIGP-EDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNT 322 (391)
T ss_pred c-cccc------cccc--ccHHHHHHHHHHHHHcCCCH-HHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCcc
Confidence 0 0000 0000 01123367889999999997 999 999999887777788899999876
Q ss_pred -----ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh-hc--ccCCCCCceEEEEEEccccccee
Q 044410 331 -----KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE-MK--ATTGEGLECGVLFGFGPGLTVET 389 (402)
Q Consensus 331 -----k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~-g~--i~~G~~~d~vll~~~G~G~~~~~ 389 (402)
.+..+ -=.-.+||...|+-+..+.++..+...+ |. ++.. ...+..+.|.|.+.-.
T Consensus 323 ~~G~~pvN~~-GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~~Qv~~~---~~~l~~~~G~~~~~~~ 385 (391)
T PRK08256 323 YGGRWVVNPS-GGLLSKGHPLGATGLAQCAELTWQLRGTAGARQVEGA---RLALQHNLGLGGACVV 385 (391)
T ss_pred CCCCeeeCCC-CccccCCCCccHHHHHHHHHHHHHhcCCcCCCcCCcc---ceEEEeccccceeEEE
Confidence 22221 0012379999888888888877652210 11 2222 5677777775544433
No 87
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.45 E-value=6.6e-12 Score=126.37 Aligned_cols=95 Identities=11% Similarity=0.066 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|++++|+++|+++++||.+++++..+ ...+.++..++..+|++... +++.++.+|++++.|+..|.+.|+
T Consensus 28 ~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~-P~~tV~~aCaSG~~Ai~~Aa~~I~ 106 (428)
T PRK08963 28 PAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT-DAYSVSRACATSFQAVANVAESIM 106 (428)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCC-cceeehhhhHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998765 33355677789999998432 288999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcc
Q 044410 187 NNPGARVLVVCSDIRVL 203 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~ 203 (402)
+|.++.||+++.|++|.
T Consensus 107 sG~~dvvLvgG~Esms~ 123 (428)
T PRK08963 107 AGTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCCEEEEecccccCC
Confidence 99999999999999874
No 88
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.45 E-value=4.2e-12 Score=126.34 Aligned_cols=95 Identities=14% Similarity=0.077 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
++.+|+..|++++|++ +|+++++||.||+++..+ ...+..+.++...+|++.... ++.++++|+|++.|+.+|.+.
T Consensus 25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp-~~tV~~~CaSG~~Av~~A~~~ 103 (400)
T PRK13359 25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVP-GSTINRLCGSGMDAVGVAARA 103 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc-eEEEeccchhHHHHHHHHHHH
Confidence 3789999999999996 599999999999998875 224778899999999997443 899999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCcc
Q 044410 185 AENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~ 203 (402)
|++|..+.+|+++.|++|.
T Consensus 104 I~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 104 IKSGEAALMIAGGVESMSR 122 (400)
T ss_pred HHcCCCCEEEEeeeeccCC
Confidence 9999999999999999985
No 89
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.44 E-value=1.5e-11 Score=123.45 Aligned_cols=334 Identities=13% Similarity=0.115 Sum_probs=192.9
Q ss_pred cccccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCcc
Q 044410 13 MTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCC 92 (402)
Q Consensus 13 ~~~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~ 92 (402)
|.|.+...++ |.|+|+|...|--. +.+++.+.+.. .......+ ..+.....++..+.-....+. +
T Consensus 4 ~~~~~~~~~~-VvItGig~~sp~g~-~~~~~w~~L~~--G~s~i~~~---~~~~~~~~~~~~~~~g~i~~~------~-- 68 (418)
T PRK07910 4 ELTTGKGFPN-VVVTGIAMTTALAT-DAETTWKLLLD--GQSGIRTL---DDPFVEEFDLPVRIGGHLLEE------F-- 68 (418)
T ss_pred cccCCCCCCC-EEEEeeEEECCCCC-CHHHHHHHHHc--CCCeeEeC---ChhhhhccCCCcceEEEeccC------c--
Confidence 3455555567 99999999998854 66777666531 11000000 001011111211110000000 0
Q ss_pred CCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCC---CCCCccEEEEEecCC-C-------------------------C
Q 044410 93 YEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQ---PVSKITHLIFSAFYG-V-------------------------D 143 (402)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~---~~~dId~li~~s~~~-~-------------------------~ 143 (402)
-+.+..+..+..+....|+..|+++||+++|+ +++.+. |+++++.+ . .
T Consensus 69 --d~~~~~~~~~~~d~~~~~~l~aa~~AledAg~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (418)
T PRK07910 69 --DHQLTRVELRRMSYLQRMSTVLGRRVWENAGSPEVDTNRLM-VSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMY 145 (418)
T ss_pred --cccCCHHHHhhccHHHHHHHHHHHHHHHHcCCCCCCcccEE-EEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHh
Confidence 01122333333445667999999999999996 344454 44444321 0 1
Q ss_pred CC-CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----c------C-----
Q 044410 144 MP-GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----F------H----- 206 (402)
Q Consensus 144 ~p-~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----~------~----- 206 (402)
++ ..+.++...+|+... .+.+..+|++++.||..|.++|++|..+.+||.++|..... | .
T Consensus 146 ~~n~~a~~is~~~~~~G~---~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~ 222 (418)
T PRK07910 146 MPNGPAAAVGLERHAKAG---VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNND 222 (418)
T ss_pred ccccHHHHHHHHhCCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCC
Confidence 11 246678888898875 56789999999999999999999999999999999874210 0 0
Q ss_pred ------CCCccchhhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCch
Q 044410 207 ------EPSETHLDVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDV 279 (402)
Q Consensus 207 ------~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v 279 (402)
.|.|.++ ..+++|||++++||++.+.... ......++.+.+.. .++.++.. .+.
T Consensus 223 ~~~~~~rPFd~~~----~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~--------------~dg~~~~~-~~~ 283 (418)
T PRK07910 223 DPAGACRPFDKDR----DGFVFGEGGALMVIETEEHAKARGANILARIMGASIT--------------SDGFHMVA-PDP 283 (418)
T ss_pred CCCCCcCCCcCCC----CCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEe--------------cCCCCCCC-CCC
Confidence 1222222 4789999999999997654111 01112344433221 11111100 010
Q ss_pred hHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHH
Q 044410 280 PVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFI 353 (402)
Q Consensus 280 ~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~ 353 (402)
......++++++|+++|+++ +|| ++-.|-.+.. -.+.+.+.+|-..-.+. + +-..+||+.+|+-.+.
T Consensus 284 ---~~~~~~~a~~~Al~~agi~~-~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v~-s--~K~~~GH~~~AaG~~~ 356 (418)
T PRK07910 284 ---NGERAGHAMTRAIELAGLTP-GDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAVY-A--PKSALGHSVGAVGAVE 356 (418)
T ss_pred ---CHHHHHHHHHHHHHHhCCCH-HHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCcee-C--ccccccccHHHHHHHH
Confidence 11234578899999999997 999 9999986653 35566777773211121 2 3567899999987766
Q ss_pred HHHHHHhhhhhhcccC-----------------CC----CCceEEEEEEcccccceeeEEee
Q 044410 354 LDEVRKKSIEEMKATT-----------------GE----GLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 354 L~~~~~~~~~~g~i~~-----------------G~----~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
|...+-. +.+|.+.| +. +..+++.-+||-|.+-.+++|+.
T Consensus 357 li~~~l~-l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 357 SILTVLA-LRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred HHHHHHH-HhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEec
Confidence 5433211 00122211 00 12567889999999999999874
No 90
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.44 E-value=7e-12 Score=124.93 Aligned_cols=230 Identities=15% Similarity=0.110 Sum_probs=150.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC--CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD--MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~--~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
+..+|+.+|+++||+++|++++|||.|+++++.+ .. .+..+..+...+|+...+ .++++++|++++.||..|.++
T Consensus 21 ~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~~p--~~~v~~~CaSg~~Al~~A~~~ 98 (389)
T PRK07516 21 TLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKP--ATRVENACATGSAAVYAALDA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCCCc--eeeeccccHHHHHHHHHHHHH
Confidence 4789999999999999999999999999987643 21 111223344566776554 788999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCccc-------------c-----C----------------------------------------
Q 044410 185 AENNPGARVLVVCSDIRVLD-------------F-----H---------------------------------------- 206 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~~-------------~-----~---------------------------------------- 206 (402)
|++|.+++|||+++|++|.. + .
T Consensus 99 I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~ 178 (389)
T PRK07516 99 IEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVA 178 (389)
T ss_pred HHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 99999999999999986421 0 0
Q ss_pred CCCc----c-chhh----------------hhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccce
Q 044410 207 EPSE----T-HLDV----------------LVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQ 265 (402)
Q Consensus 207 ~~~~----~-~~~~----------------~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 265 (402)
+|.. + +.++ ......++|||+|+||.+.+..... .....+.+.+..+.. ..+.
T Consensus 179 nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~-~~~v~i~g~~~~~~~-----~~~~ 252 (389)
T PRK07516 179 NPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARAL-QRAVRFRARAHVNDF-----LPLS 252 (389)
T ss_pred CChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhc-CCCEEEEEEEeccCc-----cccc
Confidence 0100 0 0000 0112245789999888875431111 112334433221100 0000
Q ss_pred eecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc--------------
Q 044410 266 LKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE-------------- 330 (402)
Q Consensus 266 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e-------------- 330 (402)
..+... ......+++++++++|+++ +|| .+-+|-......-...+.||+.++
T Consensus 253 ----------~~~~~~--~~~~~~a~~~a~~~agl~~-~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~ 319 (389)
T PRK07516 253 ----------RRDPLA--FEGPRRAWQRALAQAGVTL-DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAK 319 (389)
T ss_pred ----------CCCccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccC
Confidence 011100 1233468889999999997 999 889998877776777899998864
Q ss_pred --ccHHHHHH---HHhcCCCCcchHHHHHHHHHHh
Q 044410 331 --KLWASRYV---LREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 331 --k~~~~~~~---l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
+++.| . +--+||...|+-...+.++..+
T Consensus 320 ~g~~pvN--~sGG~la~Ghp~gasG~~~~~e~~~Q 352 (389)
T PRK07516 320 DGKLPVN--PSGGLKAKGHPIGATGVSMHVLAAMQ 352 (389)
T ss_pred CCCeeec--CCCCcccCCCCccHHHHHHHHHHHHH
Confidence 22332 1 3358999999988888888764
No 91
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.44 E-value=3.6e-12 Score=127.48 Aligned_cols=255 Identities=15% Similarity=0.172 Sum_probs=162.0
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCC-CCc----cEEEEEecCC-C-------------------------CCC-CHHHHHHH
Q 044410 106 IDEVPKLGKEAALKAIKEWGQPV-SKI----THLIFSAFYG-V-------------------------DMP-GADVRLMR 153 (402)
Q Consensus 106 ~~~~~~la~~Aa~~aL~~ag~~~-~dI----d~li~~s~~~-~-------------------------~~p-~~a~~i~~ 153 (402)
.+....|+..|+++||+++|+.. ..+ -.|+++++.+ . .+| ..+.+|+.
T Consensus 70 ~~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 149 (405)
T PRK09116 70 MGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGL 149 (405)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHH
Confidence 34567899999999999999842 212 2466665421 0 123 25778999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----c----------------CCCCccch
Q 044410 154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----F----------------HEPSETHL 213 (402)
Q Consensus 154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----~----------------~~~~~~~~ 213 (402)
.+|+... .+.+..+|++++.||..|.++|++|..+.+||.++|..+.. | ..|.|.++
T Consensus 150 ~~~~~Gp---~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~ 226 (405)
T PRK09116 150 FFGLKGR---VIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR 226 (405)
T ss_pred HhCCCCC---cccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC
Confidence 9999985 57899999999999999999999999999999999874310 0 11222222
Q ss_pred hhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410 214 DVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS 292 (402)
Q Consensus 214 ~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 292 (402)
..+++|+||+++||++.+... .......++.+.+... ++.++. .++ ...+.++++
T Consensus 227 ----~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~--------------d~~~~~-~p~-----~~~~~~ai~ 282 (405)
T PRK09116 227 ----DGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNS--------------DGAHVT-QPQ-----AETMQIAME 282 (405)
T ss_pred ----CCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcC--------------CCCcCC-CCC-----HHHHHHHHH
Confidence 378899999999999754311 1011123444332210 111000 111 234567889
Q ss_pred HhhccCCCCCCcce-EEEEcCCCH-----HHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410 293 NAMSPIGISDWNSL-FYVVHPGGD-----GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK 366 (402)
Q Consensus 293 ~~L~~~gl~~~~di-~~i~H~~~~-----~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~ 366 (402)
++|+++|+++ +|| ++.+|-.+. .-...+.+.+|- +++.+ .+-..+||+.+|+-.+.+...+.. +.+|.
T Consensus 283 ~AL~~Agi~p-~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~---~~pv~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ 356 (405)
T PRK09116 283 LALKDAGLAP-EDIGYVNAHGTATDRGDIAESQATAAVFGA---RMPIS-SLKSYFGHTLGACGALEAWMSIEM-MNEGW 356 (405)
T ss_pred HHHHHhCCCH-HHcCEEECcCccCCCCCHHHHHHHHHHhCC---CCeeE-CcchhhcccHHHHHHHHHHHHHHH-HHcCc
Confidence 9999999997 999 999997544 445566777772 22222 134578999877665544432221 00022
Q ss_pred ccC------------------CC----CCceEEEEEEcccccceeeEEe
Q 044410 367 ATT------------------GE----GLECGVLFGFGPGLTVETVVLQ 393 (402)
Q Consensus 367 i~~------------------G~----~~d~vll~~~G~G~~~~~~ll~ 393 (402)
+.| +. +.+++|..+||-|.+-++++|+
T Consensus 357 ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 357 FAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred cCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 211 00 0156888999999998888875
No 92
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.44 E-value=4.7e-12 Score=126.70 Aligned_cols=237 Identities=16% Similarity=0.064 Sum_probs=145.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCC-----CCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDM-----PGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLA 181 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~-----p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A 181 (402)
+..+|+.+|+++||+++|++++|||.||++++++ +.. +.....++ +++.+.+ +++++.+|+++..+|..|
T Consensus 25 s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~g~~--~~~v~~~Casg~~al~~A 100 (403)
T PRK06289 25 DFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALWGVP--ASRHEAACASGSVATLAA 100 (403)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCCCCc--eeecccccHHHHHHHHHH
Confidence 4789999999999999999999999999988755 211 22222222 2443322 688999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeccCcccc-------------C------CC-Cccc-----------------------------
Q 044410 182 KDIAENNPGARVLVVCSDIRVLDF-------------H------EP-SETH----------------------------- 212 (402)
Q Consensus 182 ~~~i~~g~~~~vLvv~~e~~s~~~-------------~------~~-~~~~----------------------------- 212 (402)
..+|++|.+++|||+++|+++... . .| ....
T Consensus 101 a~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la~va~~~~~ 180 (403)
T PRK06289 101 MADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLRAIAEINFA 180 (403)
T ss_pred HHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999999999999865210 0 00 0000
Q ss_pred ----------h----------hhh------------hhhhhhccCcEEEEEccCCCCCCCC--CCceEEEeeeeeecCCC
Q 044410 213 ----------L----------DVL------------VVQAVFGDGAGAAIIGADSDISNHE--SPLFQILSCTQTTVPDT 258 (402)
Q Consensus 213 ----------~----------~~~------------~~~~lfGDGAaA~vL~~~~~~~~~~--~~~~~~~~~~~~~~p~~ 258 (402)
+ ++. ..+...+|||+|+||.+.+...... .+...+.+.+....+..
T Consensus 181 ~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~ 260 (403)
T PRK06289 181 NARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLG 260 (403)
T ss_pred HHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccc
Confidence 0 000 0111235888888887654311110 12245554433211100
Q ss_pred cccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc-------
Q 044410 259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE------- 330 (402)
Q Consensus 259 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e------- 330 (402)
+..+.+. . ..+... ......+.+++++++|+++ +|| .+-+|-.-..+.-...+.||+.+.
T Consensus 261 -----~~~~~~~---~-~~~~~~--~~~~~~aa~~a~~~Agi~~-~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v 328 (403)
T PRK06289 261 -----LEQKLDR---S-AGDPYV--LPHVRQAVLDAYRRAGVGL-DDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAI 328 (403)
T ss_pred -----ccccccc---c-cccccc--cHHHHHHHHHHHHHcCCCH-HHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHH
Confidence 0000000 0 000001 1113457889999999997 999 888898877777777899998752
Q ss_pred ---------ccHHHH-HHHHhcCCCCcchHHHHHHHHHHh
Q 044410 331 ---------KLWASR-YVLREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 331 ---------k~~~~~-~~l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
+++.|. -=.-.+||...++-+..+.+++.+
T Consensus 329 ~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~Q 368 (403)
T PRK06289 329 ENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQ 368 (403)
T ss_pred hcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHH
Confidence 122210 001247999988888888887775
No 93
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.44 E-value=2.1e-12 Score=128.50 Aligned_cols=95 Identities=14% Similarity=0.033 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
++.+|+.+|++++|++ +|+++++||.|++++... ...+..+..++..+|++... +++.++++|+|++.|+..|...
T Consensus 24 ~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~-p~~~V~~~CaSG~~Ai~~a~~~ 102 (400)
T TIGR02430 24 RADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV-PGTTVNRLCGSGLDAIGMAARA 102 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC-ceEEeechhhhHHHHHHHHHHH
Confidence 3789999999999995 799999999999998764 32367788899999998533 2889999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCcc
Q 044410 185 AENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~ 203 (402)
|++|..+.+|+++.|++|.
T Consensus 103 I~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 103 IKAGEADLLIAGGVESMSR 121 (400)
T ss_pred HHCCCCCEEEEeccccccC
Confidence 9999999999999999984
No 94
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.44 E-value=4.1e-12 Score=127.87 Aligned_cols=259 Identities=15% Similarity=0.160 Sum_probs=165.3
Q ss_pred hHHHHHHHHHHHHHHHcCCC-CCCccE----EEEEecCC-C---------------------CCC-----CHHHHHHHHc
Q 044410 108 EVPKLGKEAALKAIKEWGQP-VSKITH----LIFSAFYG-V---------------------DMP-----GADVRLMRLL 155 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~-~~dId~----li~~s~~~-~---------------------~~p-----~~a~~i~~~L 155 (402)
...+|+..|+++||+++|++ +++++. ++++++.+ . ..| ..+.+|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 36789999999999999998 666542 44444321 1 011 2467788899
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c-----------CCCCccch
Q 044410 156 GLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----------HEPSETHL 213 (402)
Q Consensus 156 Gl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-----------~~~~~~~~ 213 (402)
|+... .+.+..+|++++.||..|..+|++|..+.+||+++|..... + ..|.+.++
T Consensus 156 ~l~Gp---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 156 KLKGP---SGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred CCCCc---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 99875 57889999999999999999999999999999999863210 0 01222222
Q ss_pred hhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410 214 DVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS 292 (402)
Q Consensus 214 ~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 292 (402)
..+++||||+++||++.+.... ......++.+.+... ++.++.. +. + ......++++
T Consensus 233 ----~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~--------------d~~~~~~-p~-~--~~~~~~~ai~ 290 (421)
T PTZ00050 233 ----AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSS--------------DAHHITA-PH-P--DGRGARRCME 290 (421)
T ss_pred ----CCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--------------CCCCCCC-CC-C--ChHHHHHHHH
Confidence 3578999999999998654111 011122344332210 0100000 00 0 1234557889
Q ss_pred Hhhcc-CCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCc-cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh
Q 044410 293 NAMSP-IGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRK-EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE 364 (402)
Q Consensus 293 ~~L~~-~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~-ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~ 364 (402)
++|++ +|+++ +|| ++-+|-.+... .+.+.+.++-.. +.++.+ .+-..+||+.+|+-.+.|...+.. +.+
T Consensus 291 ~Al~~~Agi~~-~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~-s~K~~~GH~~~AaG~~~l~~~~l~-l~~ 367 (421)
T PTZ00050 291 NALKDGANINI-NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVS-STKGGLGHLLGAAGAVESIVTILS-LYE 367 (421)
T ss_pred HHHHhccCCCh-hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEE-CccccccccHHHHHHHHHHHHHHH-HHc
Confidence 99999 99997 999 99999766533 345666666432 333332 134478999999987777654421 111
Q ss_pred hcccC-----------------C------CCCceEEEEEEcccccceeeEEee
Q 044410 365 MKATT-----------------G------EGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 365 g~i~~-----------------G------~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
+.+.+ + ....+++..+||-|.+-++++|+.
T Consensus 368 ~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 368 QIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 33321 0 012578899999999999999874
No 95
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.43 E-value=8.6e-12 Score=124.99 Aligned_cols=255 Identities=16% Similarity=0.102 Sum_probs=161.6
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC----------------------C----CCC-CHHHHHHH
Q 044410 105 LIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG----------------------V----DMP-GADVRLMR 153 (402)
Q Consensus 105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~----------------------~----~~p-~~a~~i~~ 153 (402)
..+....|+..|+++||+++|+++++++ .+++++... + .++ ..+.+|+.
T Consensus 68 ~~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 147 (406)
T PRK08439 68 KADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISI 147 (406)
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHH
Confidence 3345678999999999999999887775 355544311 0 112 46788999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC-cc----------c----------cCCCCccc
Q 044410 154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VL----------D----------FHEPSETH 212 (402)
Q Consensus 154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~-s~----------~----------~~~~~~~~ 212 (402)
.+|+... .+.+..+|++++.||..|.++|++|..+.+||+++|.. +. . ...|.|.+
T Consensus 148 ~~gl~Gp---~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~ 224 (406)
T PRK08439 148 EHGLKGP---NLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKD 224 (406)
T ss_pred HhCCCCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCC
Confidence 9999975 56778999999999999999999999999999999963 10 0 01132222
Q ss_pred hhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHH
Q 044410 213 LDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL 291 (402)
Q Consensus 213 ~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 291 (402)
+ ..+++|+||+++||++.+... .......++.+.+.. . ++.++. .+. .+...++|
T Consensus 225 ~----~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~----~----------d~~~~~-~p~-----~~~~~~a~ 280 (406)
T PRK08439 225 R----DGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGES----G----------DANHIT-SPA-----PEGPLRAM 280 (406)
T ss_pred C----CcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEcc----C----------CCCCCC-CCC-----HHHHHHHH
Confidence 2 367899999999999754411 100111233322211 0 110000 111 13455788
Q ss_pred HHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH---HHhhh
Q 044410 292 SNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV---RKKSI 362 (402)
Q Consensus 292 ~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~---~~~~~ 362 (402)
+++|+++|+ ++| ++..|-.+.. -.+.+.+.++-.....+.+ .+-..+||+.+|+-.+.+... +++
T Consensus 281 ~~al~~ag~---~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~-s~K~~~Gh~~~AsG~~~~~~~~~~l~~-- 354 (406)
T PRK08439 281 KAALEMAGN---PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVS-STKGQIGHCLGAAGAIEAVISIMAMRD-- 354 (406)
T ss_pred HHHHHHcCC---CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEE-CcccccccCchhhhHHHHHHHHHHHhC--
Confidence 899999987 457 8999976543 3445566666432222221 123469999999877655433 232
Q ss_pred hhhcccC-----------------C----CCCceEEEEEEcccccceeeEEee
Q 044410 363 EEMKATT-----------------G----EGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 363 ~~g~i~~-----------------G----~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
|.+.+ + .+...++.-+||-|.+-++++|+.
T Consensus 355 --~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 355 --GILPPTINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred --CeeCCCCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 33221 0 011567889999999999999874
No 96
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.43 E-value=9.6e-12 Score=123.74 Aligned_cols=94 Identities=14% Similarity=0.029 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
++.+|+.+|++++|+++|++++|||.+++++..+ ...+..+..++..+|++.... .+.++.+|++++.++..|.+.|+
T Consensus 25 ~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p-~~~v~~~caSg~~av~~Aa~~I~ 103 (388)
T PRK06366 25 KAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVT-KYTVNVVCASGMLAVESAAREIM 103 (388)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCc-ceeeechhhHHHHHHHHHHHHHh
Confidence 3789999999999999999999999999887644 223345678899999985322 77889999999999999999999
Q ss_pred cCCCCeEEEEEeccCc
Q 044410 187 NNPGARVLVVCSDIRV 202 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s 202 (402)
+|.++.||+++.|++|
T Consensus 104 sG~~d~vla~G~e~ms 119 (388)
T PRK06366 104 LGERDLVIAGGMENMS 119 (388)
T ss_pred cCCCCEEEEEeeEccc
Confidence 9999999998889876
No 97
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.42 E-value=1.3e-11 Score=122.37 Aligned_cols=251 Identities=14% Similarity=0.142 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHcCCCC--CCccEEEEEecCC-----------------------------CCCC-CHHHHHHHHcCCC
Q 044410 111 KLGKEAALKAIKEWGQPV--SKITHLIFSAFYG-----------------------------VDMP-GADVRLMRLLGLK 158 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~--~dId~li~~s~~~-----------------------------~~~p-~~a~~i~~~LGl~ 158 (402)
.++..|+++||+++|+++ +++. |+++++.+ ..+| ..+.+++..+|++
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~ 136 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDCG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ 136 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC
Confidence 366689999999999964 3444 55555321 0112 2467889999999
Q ss_pred CccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecc-Ccc--------------ccCCCCccchhhhhhhhhhc
Q 044410 159 PSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI-RVL--------------DFHEPSETHLDVLVVQAVFG 223 (402)
Q Consensus 159 ~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~-~s~--------------~~~~~~~~~~~~~~~~~lfG 223 (402)
.. .+.+..+|++++.||..|.++|++|..+.+||.++|. .+. .-..|.|.++ ..+++|
T Consensus 137 Gp---~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r----~G~v~g 209 (381)
T PRK05952 137 GP---VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR----EGLVLG 209 (381)
T ss_pred Cc---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC----CCcccc
Confidence 75 6788999999999999999999999999999999996 221 0012433322 367999
Q ss_pred cCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCC
Q 044410 224 DGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISD 302 (402)
Q Consensus 224 DGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~ 302 (402)
|||+++||++.+... .......++.+.+.... +.+... +.. -.....++++++|+++|+.+
T Consensus 210 EGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d--------------~~~~~~-~~~---~~~~~~~ai~~Al~~agi~p 271 (381)
T PRK05952 210 EGGAILVLESAELAQKRGAKIYGQILGFGLTCD--------------AYHMSA-PEP---DGKSAIAAIQQCLARSGLTP 271 (381)
T ss_pred ccEEEEEEeeHHHHHhCCCceEEEEEEEEecCC--------------CCCCCC-CCC---CHHHHHHHHHHHHHHhCCCH
Confidence 999999999864311 10111234444332110 100000 000 12345678899999999997
Q ss_pred Ccce-EEEEcCCCHHHH-----HHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCC------
Q 044410 303 WNSL-FYVVHPGGDGLL-----DQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTG------ 370 (402)
Q Consensus 303 ~~di-~~i~H~~~~~~~-----~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G------ 370 (402)
+|| ++..|-.+.... +.+.+.++ ++++.+ .+-..+||+.+|+-.+.+..++.. +.++.+.|-
T Consensus 272 -~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~v~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ipp~~~~~~~ 345 (381)
T PRK05952 272 -EDIDYIHAHGTATRLNDQREANLIQALFP---HRVAVS-STKGATGHTLGASGALGVAFSLLA-LRHQQLPPCVGLQEP 345 (381)
T ss_pred -HHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCeee-cchhhhccChHHHHHHHHHHHHHH-HhcCccCCCCCCCCC
Confidence 999 999997765443 34455565 233332 134589999999987777654421 111333320
Q ss_pred ------------CCCceEEEEEEcccccceeeEEe
Q 044410 371 ------------EGLECGVLFGFGPGLTVETVVLQ 393 (402)
Q Consensus 371 ------------~~~d~vll~~~G~G~~~~~~ll~ 393 (402)
.+.++++..+||-|..-++++|+
T Consensus 346 ~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 346 EFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred CCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 01257899999999999998886
No 98
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.42 E-value=4.8e-12 Score=126.11 Aligned_cols=95 Identities=13% Similarity=0.045 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
++.+|+.+|++++|++ +|+++++||.|++++..+ .. .+..+..++..+|++.... ++.++++|+|+..|+..|.+.
T Consensus 25 ~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP-~~tV~~aCaSG~~Ai~~A~~~ 103 (401)
T PRK09050 25 RADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVP-GTTINRLCGSGMDAVGTAARA 103 (401)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCc-eEEEecccccHHHHHHHHHHH
Confidence 3789999999999995 799999999999998765 32 3667888999999976443 889999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCcc
Q 044410 185 AENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~ 203 (402)
|++|..+.+|+++.|++|.
T Consensus 104 I~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 104 IKAGEAELMIAGGVESMSR 122 (401)
T ss_pred HHCCCCCEEEEeccccccc
Confidence 9999999999999999984
No 99
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.42 E-value=2.6e-11 Score=120.99 Aligned_cols=213 Identities=13% Similarity=0.082 Sum_probs=140.6
Q ss_pred CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc--------------cCCCCcc
Q 044410 146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD--------------FHEPSET 211 (402)
Q Consensus 146 ~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~--------------~~~~~~~ 211 (402)
..+.+|+..||+... .+.+..+|++++.||..|.++|++|.++.|||+++|..+.. ...|.+.
T Consensus 138 ~~a~~ia~~lgl~Gp---~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd~ 214 (392)
T PRK09185 138 SLADFLRAYLGLSGP---AYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFSA 214 (392)
T ss_pred HHHHHHHHHhCCCCC---cccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCcC
Confidence 578899999999864 67889999999999999999999999999999999864321 1123332
Q ss_pred chhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHH
Q 044410 212 HLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL 291 (402)
Q Consensus 212 ~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 291 (402)
++ ..+++||||+++||++... . ..++.+.+...- +.+.. ... + ....+.+++
T Consensus 215 ~~----~G~~~gEGaa~vVLe~~~~-~-----~~~I~g~g~~~d--------------~~~~~-~~~-~--~~~~~~~a~ 266 (392)
T PRK09185 215 NR----DGINIGEAAAFFLLEREDD-A-----AVALLGVGESSD--------------AHHMS-APH-P--EGLGAILAM 266 (392)
T ss_pred CC----CccceeceEEEEEEEEcCC-C-----cEEEEEEEEeCC--------------CCCCC-CCC-C--CHHHHHHHH
Confidence 22 3688999999999998733 1 234544332210 00000 000 0 112345788
Q ss_pred HHhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhh
Q 044410 292 SNAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEM 365 (402)
Q Consensus 292 ~~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g 365 (402)
+++|+++|+++ +|| ++.+|-.+... ...+.+.++-. ++.+ .+-..+||+.+|+-.+.|...+.. +.+|
T Consensus 267 ~~Al~~Agl~~-~dId~v~~hgtgt~~~D~~E~~al~~~f~~~---~pv~-s~K~~~Gh~~~AaG~~~l~~~~~~-l~~~ 340 (392)
T PRK09185 267 QQALADAGLAP-ADIGYINLHGTATPLNDAMESRAVAAVFGDG---VPCS-STKGLTGHTLGAAGAVEAAICWLA-LRHG 340 (392)
T ss_pred HHHHHHcCCCH-HHccEEEeCCCCCcCCCHHHHHHHHHHhCCC---Ccee-CCCcccccChhhcchHHHHHHHHH-HhcC
Confidence 99999999997 999 99999776443 44556666532 2221 123478999999877776554421 0113
Q ss_pred cccC---------CC------------CCceEEEEEEcccccceeeEEeee
Q 044410 366 KATT---------GE------------GLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 366 ~i~~---------G~------------~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
.+.+ .. +.++++..+||-|.+-.+++|+..
T Consensus 341 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 341 LPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred CCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeC
Confidence 2221 00 026788999999999999999864
No 100
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=7.6e-12 Score=124.67 Aligned_cols=95 Identities=16% Similarity=0.097 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
++.+|+.+|++++|+++|++++|||.+++++..+ ...+..+..++..+|++.... ++.++++|++++.|+..|.+.|
T Consensus 25 ~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p-~~tV~~~CaSG~~Ai~~A~~~I 103 (401)
T PRK08131 25 RPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVP-GQTVNRLCASGLAAVIDAARAI 103 (401)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCc-eeeeechhhhHHHHHHHHHHHH
Confidence 4789999999999999999999999999998754 223567777889999985432 8899999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 104 TCGEGDLYLAGGVESMSR 121 (401)
T ss_pred HCCCCCEEEEEEecCCCC
Confidence 999999999999999884
No 101
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.41 E-value=3.8e-11 Score=119.44 Aligned_cols=248 Identities=13% Similarity=0.051 Sum_probs=160.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCC-----CccEEEEEecCC-C-------------------------------------C
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVS-----KITHLIFSAFYG-V-------------------------------------D 143 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~-----dId~li~~s~~~-~-------------------------------------~ 143 (402)
+....|+..|+++||+++|++.. ++. |+++++.+ . .
T Consensus 71 ~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~G-vivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 149 (398)
T PRK06519 71 ETWQRLGTYAAGLALDDAGIKGNEELLSTMD-MIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQ 149 (398)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCccceE-EEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhh
Confidence 34678999999999999998543 333 44555432 1 0
Q ss_pred CC-CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------cC-----C
Q 044410 144 MP-GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FH-----E 207 (402)
Q Consensus 144 ~p-~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------~~-----~ 207 (402)
+| ..+.+|+..+|+... .+.+..+|++++.||..|.++|++|..+.+||.++|..... +. .
T Consensus 150 ~~n~~a~~is~~~gl~Gp---~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~ 226 (398)
T PRK06519 150 LSNLLAGNISIVHKVTGS---SRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWA 226 (398)
T ss_pred hhhHHHHHHHHHhCCCCc---cccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCC
Confidence 11 256788999999985 57899999999999999999999999999999999863210 10 1
Q ss_pred CCccch--hhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHH
Q 044410 208 PSETHL--DVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIG 284 (402)
Q Consensus 208 ~~~~~~--~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 284 (402)
|.+ ++ .+ ...++.|+||+++||++.+... .......++.+.+... . .. -.
T Consensus 227 p~~-d~~~~~-r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~--------------~------~~-----~~ 279 (398)
T PRK06519 227 PVW-SRGGED-GGGFILGSGGAFLVLESREHAEARGARPYARISGVESDR--------------A------RR-----AP 279 (398)
T ss_pred chh-ccCccC-CCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecC--------------C------CC-----Ch
Confidence 111 11 01 2478999999999999866411 1111123444332110 0 00 01
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVR 358 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~ 358 (402)
..+.++|+++|+++|+ + +|| |+..|-.+... .+.+.+.+++|.. . +-..+||+.+|+-.+.+...+
T Consensus 280 ~~~~~am~~AL~~Agl-~-~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvs---S---~Ks~~GH~l~AAGa~e~i~~~ 351 (398)
T PRK06519 280 GDLEASLERLLKPAGG-L-AAPTAVISGATGAHPATAEEKAALEAALAGPVR---G---IGTLFGHTMEAQFPLGLALAA 351 (398)
T ss_pred HHHHHHHHHHHHHCCC-c-ccCCEEEeCCCCCCCccHHHHHHHHHHcCCCcc---c---cchhhccchHHHHHHHHHHHH
Confidence 2356799999999999 7 899 99999776443 5556777775422 2 355799999998777765444
Q ss_pred HhhhhhhcccCCCCC----------ceEEEEEEcccccceeeEEee
Q 044410 359 KKSIEEMKATTGEGL----------ECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 359 ~~~~~~g~i~~G~~~----------d~vll~~~G~G~~~~~~ll~~ 394 (402)
.. +.+|.+.|.-.. ...|.+++|.|-.-|..+++.
T Consensus 352 la-l~~g~vpp~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 352 LS-VSKGALFPPFDASGEKPMSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred HH-HhcCccCCCCCCCcccCccccccEEEEEeeccCCcceeEEEEe
Confidence 32 111544332111 237788888877667777653
No 102
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=99.40 E-value=2.3e-11 Score=118.71 Aligned_cols=253 Identities=15% Similarity=0.110 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHHHHHcCC--CCCCccEEEEEecCC-C-------------------------CCC-CHHHHHHHHcCCCC
Q 044410 109 VPKLGKEAALKAIKEWGQ--PVSKITHLIFSAFYG-V-------------------------DMP-GADVRLMRLLGLKP 159 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~--~~~dId~li~~s~~~-~-------------------------~~p-~~a~~i~~~LGl~~ 159 (402)
...++..|+++||+++|+ +++++. |+++++.+ . .++ ..+.+|...+|++.
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTA-TIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEE-EEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence 567889999999999996 455665 44444321 0 011 35778899999998
Q ss_pred ccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c-----------CCCCccchhhhh
Q 044410 160 SVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----------HEPSETHLDVLV 217 (402)
Q Consensus 160 ~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-----------~~~~~~~~~~~~ 217 (402)
. .+.+..+|++++.||..|.++|+.|..+.+||.++|..... + ..|.|.++
T Consensus 83 p---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r---- 155 (342)
T PRK14691 83 P---IGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR---- 155 (342)
T ss_pred C---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC----
Confidence 5 57889999999999999999999999999999999863210 0 11333222
Q ss_pred hhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhc
Q 044410 218 VQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMS 296 (402)
Q Consensus 218 ~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 296 (402)
..+++||||+++||++.+... .......++.+.+.... +.++.. .. + ......++++++|+
T Consensus 156 ~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d--------------~~~~~~-p~-p--~~~~~~~ai~~AL~ 217 (342)
T PRK14691 156 DGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSAD--------------AYHMTS-GA-E--DGDGAYRAMKIALR 217 (342)
T ss_pred CCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcC--------------CCCCCC-CC-C--CHHHHHHHHHHHHH
Confidence 478999999999998764411 11122345554432210 000000 00 0 12334568889999
Q ss_pred cCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH---HHhhhhhhcc
Q 044410 297 PIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV---RKKSIEEMKA 367 (402)
Q Consensus 297 ~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~---~~~~~~~g~i 367 (402)
++|+++ +|| ++..|-.+... ...+.+.+|-. ..++.+ .+-..+||+.+|+-.+.+... +++ +.+
T Consensus 218 ~Agl~p-~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~l~~----~~i 290 (342)
T PRK14691 218 QAGITP-EQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAIT-STKSATGHLLGAAGGLETIFTVLALRD----QIV 290 (342)
T ss_pred HcCCCH-HHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEE-CCcccccCCcchhhHHHHHHHHHHHhC----Ccc
Confidence 999997 999 99999765443 44566777632 223332 134578998766644433322 222 221
Q ss_pred cC------------------CC----CCceEEEEEEcccccceeeEEee
Q 044410 368 TT------------------GE----GLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 368 ~~------------------G~----~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
.| +. +.+++|..+||-|..-++++|+.
T Consensus 291 ppt~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 291 PATLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred CCcCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 11 00 12568889999999999999874
No 103
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=2.1e-11 Score=121.01 Aligned_cols=95 Identities=11% Similarity=0.039 Sum_probs=80.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
++.+|+.+|++++|+++|++++|||.+|+++..+ .. .+..+..+.-..|++... +++.++.+|+|++.|+..|.+.|
T Consensus 25 ~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v-P~~tV~~~CaSG~~Ai~~A~~~I 103 (390)
T PRK06504 25 HPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV-PGTSIDRQCGSSQQALHFAAQAV 103 (390)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC-ceEEEechhhHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998764 22 245555555555885433 38899999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|.++.+|+++.|++|.
T Consensus 104 ~sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 104 MSGTMDIVIAAGVESMTR 121 (390)
T ss_pred HCCCCCEEEEeeeeecCC
Confidence 999999999999999874
No 104
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=99.39 E-value=2.8e-11 Score=121.58 Aligned_cols=95 Identities=12% Similarity=0.055 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|++++|+++|+++++||.+|+++..+ ...+.++..+.-..|++... +++.++++|+|++.|+..|.+.|+
T Consensus 30 ~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~-p~~~V~~~CaSG~~A~~~a~~~I~ 108 (430)
T TIGR02446 30 PAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT-DAYSVTRACATSFQSAVNVAESIM 108 (430)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCC-chhhhhhhhhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998765 22345666666668998433 288999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcc
Q 044410 187 NNPGARVLVVCSDIRVL 203 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~ 203 (402)
+|.++.+|+++.|++|.
T Consensus 109 sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 109 AGAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCCEEEEeeeEcccC
Confidence 99999999999999984
No 105
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=2e-11 Score=121.38 Aligned_cols=254 Identities=13% Similarity=0.073 Sum_probs=158.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
+..+|+.+|+++||+++|++++|||.|++++... ...+..+....-.+|++... +.+.++.+|+++..++..|.+.|
T Consensus 25 ~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~-p~~~v~~acaSg~~Av~~Aa~~I 103 (382)
T PRK07801 25 HPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV-PGVTVDRQCGSSQQAIHFAAQAV 103 (382)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC-ceeeecchhhhHHHHHHHHHHHH
Confidence 3789999999999999999999999999876422 11233444444457775432 26778999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc-cc------C----------------CCCc--c----------------chh----------
Q 044410 186 ENNPGARVLVVCSDIRVL-DF------H----------------EPSE--T----------------HLD---------- 214 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~-~~------~----------------~~~~--~----------------~~~---------- 214 (402)
++|..+.|||++.|.+|. .+ . +|.. . +++
T Consensus 104 ~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~~yG~tre~~a~vav~~~ 183 (382)
T PRK07801 104 MSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESH 183 (382)
T ss_pred HCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 999999999999986642 10 0 0000 0 000
Q ss_pred -----h------------------------------hhhhhhh-------------ccCcEEEEEccCCCCCCC-CCCce
Q 044410 215 -----V------------------------------LVVQAVF-------------GDGAGAAIIGADSDISNH-ESPLF 245 (402)
Q Consensus 215 -----~------------------------------~~~~~lf-------------GDGAaA~vL~~~~~~~~~-~~~~~ 245 (402)
+ .....++ +|||+|+||.+.+..... ..+..
T Consensus 184 ~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~ 263 (382)
T PRK07801 184 RRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRA 263 (382)
T ss_pred HHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEEEEEecHHHHHHCCCCccE
Confidence 0 0000011 366666665543320000 00112
Q ss_pred EEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHH
Q 044410 246 QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKT 324 (402)
Q Consensus 246 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~ 324 (402)
++.+... ...... .........++++++++|+++ +|| ++=+|-.-....-...+.
T Consensus 264 ~i~~~~~---------------------~~~~~~--~~~~~~~~a~~~a~~~agi~~-~did~~e~~d~Fa~~~~~~~e~ 319 (382)
T PRK07801 264 RIHHLSV---------------------RGDDPV--FMLTAPIPATRYALEKTGLSI-DDIDVVEINEAFAPVVLAWLKE 319 (382)
T ss_pred EEEEEEE---------------------ecCChH--hhccChHHHHHHHHHHcCCCH-HHcCEeeecccchHHHHHHHHH
Confidence 2221100 000100 011112357889999999997 999 888888766667777889
Q ss_pred cCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410 325 LGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 325 lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
||+.++++..+ --.-.+||...|+-...+.++.++.. + .| ..+.+....|.|.+..+++++.
T Consensus 320 lG~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~--~---~~--~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 320 TGADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELE--R---TG--GRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred hCCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHH--h---cC--CCEEEEEEcccccceeEEEEEe
Confidence 99998766543 22446899999998888888887521 2 23 1455555566666666666653
No 106
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.38 E-value=2.1e-11 Score=121.85 Aligned_cols=253 Identities=12% Similarity=0.064 Sum_probs=162.7
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C-----------------C----C----C-CHHHHHHH
Q 044410 105 LIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V-----------------D----M----P-GADVRLMR 153 (402)
Q Consensus 105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~-----------------~----~----p-~~a~~i~~ 153 (402)
..+....|+..|+++||+++|+++++++ .|+++++.+ + . . + ..+.+|+.
T Consensus 67 ~~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 146 (399)
T cd00832 67 QTDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISI 146 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHH
Confidence 3445678999999999999999876543 456665432 1 0 0 1 24678999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c---------CCCCccch
Q 044410 154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F---------HEPSETHL 213 (402)
Q Consensus 154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~---------~~~~~~~~ 213 (402)
.+|+... .+.+..+|++++.||..|.++|++|. +.+||.++|..... + ..|.|.++
T Consensus 147 ~~gl~Gp---~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~ 222 (399)
T cd00832 147 RHGMRGP---SGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA 222 (399)
T ss_pred HhCCCCC---cccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC
Confidence 9999975 57889999999999999999999999 99999999873210 0 11222222
Q ss_pred hhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410 214 DVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS 292 (402)
Q Consensus 214 ~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 292 (402)
..+++|+||+++||++.+... .......++.+.+... ++.. ... ....+.++|+
T Consensus 223 ----~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~--------------d~~~--~~~-----~~~~~~~a~~ 277 (399)
T cd00832 223 ----AGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATF--------------DPPP--GSG-----RPPGLARAIR 277 (399)
T ss_pred ----CCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcC--------------CCCC--CCC-----CHHHHHHHHH
Confidence 478999999999999865411 1011122344332211 1100 000 1345668899
Q ss_pred HhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410 293 NAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK 366 (402)
Q Consensus 293 ~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~ 366 (402)
++|+++|+++ ++| ++..|..+.. -.+.+.+.+|-. +++.+ .+-..+||+.+|+-.+.|...+.. +.++.
T Consensus 278 ~al~~ag~~~-~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~--~~pv~-s~K~~~Gh~~~aaG~~~l~~~~l~-l~~~~ 352 (399)
T cd00832 278 LALADAGLTP-EDVDVVFADAAGVPELDRAEAAALAAVFGPR--GVPVT-APKTMTGRLYAGGAPLDVATALLA-LRDGV 352 (399)
T ss_pred HHHHHcCCCH-HHccEEEeccCcCCCCCHHHHHHHHHHhCCC--CCcee-CCCchhcchHHHHHHHHHHHHHHH-HhCCC
Confidence 9999999997 999 9999976543 345566667642 33332 123468999999888877654321 00022
Q ss_pred cc----------------------CCCCCceEEEEEEcccccceeeEE
Q 044410 367 AT----------------------TGEGLECGVLFGFGPGLTVETVVL 392 (402)
Q Consensus 367 i~----------------------~G~~~d~vll~~~G~G~~~~~~ll 392 (402)
+. +. +.++++.-+||-|..-.+++|
T Consensus 353 ipp~~n~~~~~p~~~l~~v~~~~~~~-~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 353 IPPTVNVTDVPPAYGLDLVTGRPRPA-ALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred cCCCCCCCCCCCCCCcccCCCcccCC-CCCEEEEeccCCCCcceEEEC
Confidence 11 11 126788888998887777664
No 107
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.38 E-value=7.5e-13 Score=101.58 Aligned_cols=66 Identities=21% Similarity=0.255 Sum_probs=54.6
Q ss_pred eeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCC
Q 044410 165 MIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD 236 (402)
Q Consensus 165 ~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~ 236 (402)
||++++|++++.||++|..+|++|..++||||++|+.+. +.++. ++....+|||||+|+||++.+.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~-----~~~~~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRT-----DRQTAFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTT-----HHHHHTTB-EEEEEEEEEEESS
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-ccccc-----ccCcceeecchheEEEEEecCC
Confidence 689999999999999999999999999999999999997 43332 3456789999999999999743
No 108
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.36 E-value=1.5e-11 Score=124.38 Aligned_cols=260 Identities=13% Similarity=0.046 Sum_probs=161.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCC-----CCccEEEEEecCC-C-------------------------CCC-CHHHHHHHHc
Q 044410 108 EVPKLGKEAALKAIKEWGQPV-----SKITHLIFSAFYG-V-------------------------DMP-GADVRLMRLL 155 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~-----~dId~li~~s~~~-~-------------------------~~p-~~a~~i~~~L 155 (402)
....|+..|+.+||+++|+++ .+...|+++++.+ . .++ ..+.+|...+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 356799999999999999854 2456788776422 1 011 2467899999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------------------cCCCCccch
Q 044410 156 GLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------------------FHEPSETHL 213 (402)
Q Consensus 156 Gl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------------------~~~~~~~~~ 213 (402)
|+... .+.+..+|++++.||..|..+|++|.++.+||.++|..... ...|.+.++
T Consensus 172 gl~Gp---~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~ 248 (437)
T PLN02836 172 GFQGP---NHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR 248 (437)
T ss_pred CCCCc---eeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC
Confidence 99875 67899999999999999999999999999999998863110 011222222
Q ss_pred hhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410 214 DVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS 292 (402)
Q Consensus 214 ~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 292 (402)
..+++||||+++||++.+.... ......++.+.+.. + ++.++. .+. .-......+++
T Consensus 249 ----~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~----~----------d~~~~~-~p~---~~~~~~~~a~~ 306 (437)
T PLN02836 249 ----DGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMS----G----------DAHHIT-QPH---EDGRGAVLAMT 306 (437)
T ss_pred ----CCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeec----C----------CCCCCc-CCC---cchHHHHHHHH
Confidence 3678999999999997654111 00112344433221 0 010000 010 01233456788
Q ss_pred HhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCc--cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh
Q 044410 293 NAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRK--EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE 364 (402)
Q Consensus 293 ~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~--ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~ 364 (402)
++|+++|+++ ++| ++-.|-.+... .+.+.+.++-.. ..++.+ .+-..+||+.+|+-.+.|...+.. +.+
T Consensus 307 ~Al~~Agi~~-~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~GH~~~AsG~~~li~~~l~-l~~ 383 (437)
T PLN02836 307 RALQQSGLHP-NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFS-STKGATGHLLGAAGAVEAIFSVLA-IHH 383 (437)
T ss_pred HHHHHcCCCH-hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeE-CCcccccccHHHHHHHHHHHHHHH-Hhc
Confidence 9999999997 999 99999766543 334555554321 122221 124467999888876654433221 111
Q ss_pred hcccC----------------------CCCCceEEEEEEcccccceeeEEeee
Q 044410 365 MKATT----------------------GEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 365 g~i~~----------------------G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
+.+.+ ..+-+.+|.-+||-|.+-++++|+..
T Consensus 384 ~~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 384 GIAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred CccCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence 32211 00114567778999999999998754
No 109
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.35 E-value=4.6e-11 Score=118.76 Aligned_cols=94 Identities=12% Similarity=0.040 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
..+|+..+++++|++ +|+++++||.+++++..+ .. .+..+..+...+|++... +++.++++|++++.|+..|.++|
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~-p~~~V~~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSV-PAVTVNRLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCC-cceeeechhHHHHHHHHHHHHHH
Confidence 789999999999996 799999999999997754 32 355677788899998533 27899999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
++|..+.||+++.|++|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999998873
No 110
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.32 E-value=1.3e-10 Score=115.98 Aligned_cols=92 Identities=20% Similarity=0.147 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~ 187 (402)
..+|+.+|+++||+++|++++|||.+++++... +........++..+|+++.+ +..++.+|++++.++..|...|++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~--~~~v~~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIP--VTRVENFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCC--EEEEecccHHHHHHHHHHHHHHHC
Confidence 679999999999999999999999999876543 21122236688899998643 778999999999999999999999
Q ss_pred CCCCeEEEEEeccCc
Q 044410 188 NPGARVLVVCSDIRV 202 (402)
Q Consensus 188 g~~~~vLvv~~e~~s 202 (402)
|..+.|||+++|++|
T Consensus 105 G~~d~vlv~G~e~~s 119 (398)
T PRK06157 105 GAYDIALALGVEKLK 119 (398)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999865
No 111
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=1.8e-10 Score=115.93 Aligned_cols=92 Identities=17% Similarity=0.095 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHH-HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGAD-VRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a-~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
..+|+.+|+++||+++|++++|||.+++++... ......+ ..++..||++..+ +..+..+|+++..++..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~--~~~v~~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKP--SKRIEGGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCc--eEEEeCCcHHHHHHHHHHHHHHH
Confidence 679999999999999999999999988765433 2222333 3467999998754 78899999999999999999999
Q ss_pred cCCCCeEEEEEeccCc
Q 044410 187 NNPGARVLVVCSDIRV 202 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s 202 (402)
+|.++.|||+++|++|
T Consensus 115 sG~~~~vLv~G~e~~s 130 (430)
T PRK06365 115 SGRMDCVAVYGFETMS 130 (430)
T ss_pred cCCCCEEEEEEeeecc
Confidence 9999999999999764
No 112
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=99.31 E-value=8.2e-11 Score=116.82 Aligned_cols=95 Identities=7% Similarity=-0.037 Sum_probs=80.8
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
++.+|+.+|++++|++ +|+++++||.+++++... .. .+..+..+....|++... +++.++.+|++++.|+..|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~-p~~tV~~~CaSG~~Ai~~Aa~~ 102 (385)
T TIGR02445 24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS-AAVTVNRLCGSSMQALHDAARA 102 (385)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc-chhhhhhhhHHHHHHHHHHHHH
Confidence 3789999999999996 599999999999997754 22 344666666678888644 3789999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCcc
Q 044410 185 AENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~ 203 (402)
|++|..+.+|+++.|++|.
T Consensus 103 I~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 103 IMTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HHCCCCCEEEEeeehhccc
Confidence 9999999999999999873
No 113
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.27 E-value=8.6e-10 Score=109.20 Aligned_cols=230 Identities=17% Similarity=0.024 Sum_probs=142.4
Q ss_pred hHHHHHHHHHHHHHHHcC-CCC-CCccEEEEEecCCC-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWG-QPV-SKITHLIFSAFYGV-DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag-~~~-~dId~li~~s~~~~-~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
+..+|+.+|+++||+++| +++ +|||.+++++...+ ........++..||+...+ .+.+ |+++..++..|...
T Consensus 24 s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~--~~~v---~~sg~~a~~~A~~a 98 (385)
T PRK06066 24 SFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRP--TMTV---AGDGLQGLAHAVMH 98 (385)
T ss_pred CHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCC--eEEE---eCcHHHHHHHHHHH
Confidence 378999999999999999 997 79999987542111 1112234577889985443 3444 88999999999999
Q ss_pred HHcCCCCeEEEEEeccCcc--c------------cCC-------------------------------------------
Q 044410 185 AENNPGARVLVVCSDIRVL--D------------FHE------------------------------------------- 207 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~--~------------~~~------------------------------------------- 207 (402)
|++|.+++|||++.|+++. . |..
T Consensus 99 V~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~N 178 (385)
T PRK06066 99 INSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSN 178 (385)
T ss_pred HHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999986532 0 100
Q ss_pred CC----c-cchh------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCc
Q 044410 208 PS----E-THLD------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMG 270 (402)
Q Consensus 208 ~~----~-~~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 270 (402)
|. . -+.+ ....+...+|||+|+||.+.+...........+.+.+...-... . ..
T Consensus 179 P~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv~I~g~g~~~~~~~---~----~~-- 249 (385)
T PRK06066 179 PRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPVWIKGIGWSTESSN---L----ET-- 249 (385)
T ss_pred ChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEEEecCCcc---c----cc--
Confidence 10 0 0000 11234466899999999876431111111234544332210000 0 00
Q ss_pred eEEEeCCchhHHHHHhHHHHHHHhhccCCCC--CCcce-EEEEcCCCHHHHHHHHHHcCCCc--cc--------------
Q 044410 271 TYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS--DWNSL-FYVVHPGGDGLLDQVEKTLGLRK--EK-------------- 331 (402)
Q Consensus 271 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--~~~di-~~i~H~~~~~~~~~~~~~lgi~~--ek-------------- 331 (402)
.++.. ........+++++++|++ + +|| .+-+|-.-....-...+.||+.+ |.
T Consensus 250 ------~~~~~--~~~~~~Aa~~a~~~AGi~~p~-~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~ 320 (385)
T PRK06066 250 ------AELGK--ANYMRIAADMAYKMAGIESPR-KEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGE 320 (385)
T ss_pred ------ccccc--cHHHHHHHHHHHHHcCCCCCH-HHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCC
Confidence 00000 111235778999999998 5 888 88888776666667788999876 32
Q ss_pred cHHHH-HHHHhcCCCCcchHHHHHHHHHHh
Q 044410 332 LWASR-YVLREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 332 ~~~~~-~~l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
++.|. -=+-.+||...++-+..+.++..+
T Consensus 321 ~PvN~~GG~la~Ghp~gatG~~~v~e~~~Q 350 (385)
T PRK06066 321 LPVNPSGGHLAKGVPLEASGLSLLLDAVEY 350 (385)
T ss_pred ccccCCCchhcCCCccchhHHHHHHHHHHH
Confidence 12210 001237999888888888877764
No 114
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.25 E-value=4.3e-10 Score=112.43 Aligned_cols=254 Identities=14% Similarity=0.100 Sum_probs=160.4
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C--------------------------CCC-CHHHHH
Q 044410 104 MLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V--------------------------DMP-GADVRL 151 (402)
Q Consensus 104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~--------------------------~~p-~~a~~i 151 (402)
++.+....|+..|+++||+++|+++.+.+ .|+++++.+ . .++ ..+.+|
T Consensus 66 ~~~~r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i 145 (406)
T PRK07967 66 RFMGDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACL 145 (406)
T ss_pred hcCCHHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHH
Confidence 33445678999999999999998754332 345554311 0 111 367889
Q ss_pred HHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----c-----------------CCCCc
Q 044410 152 MRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----F-----------------HEPSE 210 (402)
Q Consensus 152 ~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----~-----------------~~~~~ 210 (402)
+..+|++.. .+.+..+|++++.||..|.++|++|..+.+||.++|..+.. | ..|.|
T Consensus 146 s~~~~l~Gp---~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd 222 (406)
T PRK07967 146 ATPFKIKGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYD 222 (406)
T ss_pred HHHHCCCCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCc
Confidence 999999975 57899999999999999999999999999999999864311 0 01333
Q ss_pred cchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHH
Q 044410 211 THLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDK 289 (402)
Q Consensus 211 ~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 289 (402)
.++ ..++.|+||+++||++.+... .......++.+.+.. .++.++. .+. ...+.+
T Consensus 223 ~~r----~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~--------------~d~~~~~-~p~-----~~~~~~ 278 (406)
T PRK07967 223 ANR----DGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGAT--------------SDGYDMV-APS-----GEGAVR 278 (406)
T ss_pred CCC----CceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEC--------------CCCCCCC-CCC-----HHHHHH
Confidence 222 367999999999999754411 111112244443321 1111110 111 334567
Q ss_pred HHHHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH---HHh
Q 044410 290 CLSNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV---RKK 360 (402)
Q Consensus 290 ~i~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~---~~~ 360 (402)
+|+++|+..+ .+| ++..|-.+.. -.+.+.+.+|-. ..+.+ .+-..+||+.+|+-.+.+... +++
T Consensus 279 a~~~Al~~~~----~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~--~~~v~-s~K~~~GH~~~AaG~~e~i~~~lal~~ 351 (406)
T PRK07967 279 CMQMALATVD----TPIDYINTHGTSTPVGDVKELGAIREVFGDK--SPAIS-ATKSLTGHSLGAAGVQEAIYSLLMMEH 351 (406)
T ss_pred HHHHHHhCCC----CCccEEEcCCCCCCCCCHHHHHHHHHHhCCC--CCeeE-CcccccccCccccchHHHHHHHHHHhc
Confidence 8888887643 377 9999976543 345566777632 22222 124578999988877655332 222
Q ss_pred hhhhhcccC---------C-------------CCCceEEEEEEcccccceeeEEeee
Q 044410 361 SIEEMKATT---------G-------------EGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 361 ~~~~g~i~~---------G-------------~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
+.+.| . .+.++++..+||-|.+-.+++|+..
T Consensus 352 ----~~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 352 ----GFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred ----CcCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence 22211 0 0125688899999999999999864
No 115
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=99.24 E-value=5.9e-10 Score=114.02 Aligned_cols=260 Identities=15% Similarity=0.102 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQP--VSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~--~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
..+|+.+|+++||+++|++ ++|||.+++++............++.+||+.+.. ......||+++..++..|...|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~--~~~~~~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPAR--TVYSPVGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcc--eeEecCCCHHHHHHHHHHHHHHH
Confidence 6799999999999999999 9999999887553322233457899999997654 44466788899999999999999
Q ss_pred cCCCCeEEEEEeccCccc--cC-------------------------------------CCC------------------
Q 044410 187 NNPGARVLVVCSDIRVLD--FH-------------------------------------EPS------------------ 209 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~~--~~-------------------------------------~~~------------------ 209 (402)
+|.++.|||+++|+++.. +. .|.
T Consensus 105 sG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p~~~yal~a~ay~~~~G~t~ 184 (498)
T PRK08257 105 AGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRPVYVYPLFENALRAALGRSP 184 (498)
T ss_pred CCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCcchHHHHHHHHHHHHhCcCH
Confidence 999999999999985421 00 000
Q ss_pred -c---------------------------cchhhhh----------------hhh-hhccCcEEEEEccCCCCC--CCC-
Q 044410 210 -E---------------------------THLDVLV----------------VQA-VFGDGAGAAIIGADSDIS--NHE- 241 (402)
Q Consensus 210 -~---------------------------~~~~~~~----------------~~~-lfGDGAaA~vL~~~~~~~--~~~- 241 (402)
+ -+.++.. .++ ...|||+|+||.+.+... ++.
T Consensus 185 e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~ 264 (498)
T PRK08257 185 EEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPE 264 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcccceEEEEeeHHHHHhcCCCC
Confidence 0 0000000 011 256777777666543200 000
Q ss_pred CCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHH
Q 044410 242 SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ 320 (402)
Q Consensus 242 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~ 320 (402)
.....+.+.+....+. .+ ..+.-+. .......+.+++++++|+++ +|| .+=+|-.-......
T Consensus 265 ~~~V~i~g~a~~~~~~-----~~----------~~r~~~~-~~~~~~~aa~~a~~~AGi~~-~Did~~elydcF~~~~~~ 327 (498)
T PRK08257 265 DRWVYLHGGADAHDPY-----DI----------LERPDLH-RSPAIRAAGRRALALAGLGI-DDIDAFDLYSCFPSAVQV 327 (498)
T ss_pred CceEEEEEEEEeeCcc-----cc----------ccccccc-cChHHHHHHHHHHHHhCCCH-HHCCEEEeccCCHHHHHH
Confidence 0011222221110000 00 0010010 01223457789999999997 999 88888877666777
Q ss_pred HHHHcCCCcc-ccHHH-HHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccc-eeeEEee
Q 044410 321 VEKTLGLRKE-KLWAS-RYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTV-ETVVLQS 394 (402)
Q Consensus 321 ~~~~lgi~~e-k~~~~-~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~-~~~ll~~ 394 (402)
..+.||+.++ +.+.| ---+..+||.+.++-+..+.++.++.- | +++ .+.|..+.|.-++. ...+|..
T Consensus 328 ~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLR--g--~~~---~~gLv~~~GG~~~~~~~~vl~~ 397 (498)
T PRK08257 328 AARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLR--A--NPG---RRGLVTANGGYLTKHSVGVYST 397 (498)
T ss_pred HHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHh--h--cCC---CEEEEECCCChhhceEEEEEeC
Confidence 7899999866 22322 012446899999998888888877511 1 133 67777776653342 3334433
No 116
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.24 E-value=6.1e-10 Score=110.60 Aligned_cols=228 Identities=15% Similarity=0.089 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g 188 (402)
..+|+.+|+++||+++|++++|||.++..+..+.. ....++..||+...+ ...+..+|+++..++..|...|++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~---~~~~~~~~lGl~~~~--~~~v~~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGL---GPASMVDYLGLKLRH--VDSTETGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCc---cHHHHHHhCCCCCee--eccccCCcHHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999997652211111 124588999997643 6778899999999999999999999
Q ss_pred CCCeEEEEEeccCccc------------------cCC------------------------------------------C
Q 044410 189 PGARVLVVCSDIRVLD------------------FHE------------------------------------------P 208 (402)
Q Consensus 189 ~~~~vLvv~~e~~s~~------------------~~~------------------------------------------~ 208 (402)
.++.|||++.|+.+.. |.. |
T Consensus 100 ~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~NP 179 (388)
T PRK08142 100 KCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNP 179 (388)
T ss_pred CCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhccCC
Confidence 9999999999874310 000 0
Q ss_pred Cc-----cchh------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCce
Q 044410 209 SE-----THLD------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGT 271 (402)
Q Consensus 209 ~~-----~~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 271 (402)
.- -+.+ .+..+...+|||+|+||.+.+.......+...+.+.+....+.. .. +
T Consensus 180 ~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~v~I~g~~~~~~~~~-----~~-~---- 249 (388)
T PRK08142 180 HAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLKRPLVKVLGAGEAIKGQM-----GG-K---- 249 (388)
T ss_pred hhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcCCCCEEEEEEEEecCCcc-----cc-C----
Confidence 00 0000 01122355899999999876431111112345554433211100 00 0
Q ss_pred EEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc-----------------ccH
Q 044410 272 YCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE-----------------KLW 333 (402)
Q Consensus 272 ~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e-----------------k~~ 333 (402)
+++. ......+++++++++|+++ +|| .+-+|-.-....-...+.||+.+. +++
T Consensus 250 -----~~~~---~~~~~~aa~~a~~~AGi~~-~did~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lP 320 (388)
T PRK08142 250 -----VDLT---YSGAAWSGPAAFAEAGVTP-ADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLP 320 (388)
T ss_pred -----cccc---cHHHHHHHHHHHHHcCCCH-HHCCEEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCcc
Confidence 1111 1122467889999999997 999 888887665565666788998432 222
Q ss_pred HHH-HHHHhcCCCCcchHHHHHHHHHHh
Q 044410 334 ASR-YVLREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 334 ~~~-~~l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
.|. -=+...||...|+-+..+.++..+
T Consensus 321 vN~sGG~l~~G~p~gatG~~~~~E~~~Q 348 (388)
T PRK08142 321 FNTDGGGLCNNHPANRGGMTKVIEAVRQ 348 (388)
T ss_pred ccCCChhhcCCCcCcccHHHHHHHHHHH
Confidence 210 012336888888888888877765
No 117
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=99.24 E-value=7.7e-10 Score=102.72 Aligned_cols=245 Identities=18% Similarity=0.190 Sum_probs=135.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+.-..|..+|++.||++++++++|||.++.+--..+.. .+++.++.|+++ ++-+-.+|+++..+|.+|+.++.
T Consensus 49 kAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i--~s~f~ar~l~iP-----f~GlygACST~~e~l~laa~~vd 121 (329)
T PF07451_consen 49 KAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII--SSSFAARDLGIP-----FLGLYGACSTMMESLALAAMLVD 121 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC--HHHHHHHHHT-------EEEB--CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH--HHHHHHHhcCCC-----ccchhhHHHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999988766544444 458899999987 67899999999999999999999
Q ss_pred cCCCCeEEEEEeccCc---cccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCccccc
Q 044410 187 NNPGARVLVVCSDIRV---LDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYIS 263 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s---~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 263 (402)
.|-+++||+.++.... +.|+.|.+...+...+..+---||+|+||++.+. . +...-...+. .++
T Consensus 122 gg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~-~----p~It~~T~Gk--------VvD 188 (329)
T PF07451_consen 122 GGFADYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGS-G----PRITHATIGK--------VVD 188 (329)
T ss_dssp TTS-SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS---S----EEEEEEE------------B-
T ss_pred CCCcceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCC-C----cEEEEEEEEE--------EEE
Confidence 9999999999988775 3466565432233334556668999999998765 1 1222221111 111
Q ss_pred ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEc---CCCHHHHHHHHHHcCCCccccHHHHHH-
Q 044410 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVH---PGGDGLLDQVEKTLGLRKEKLWASRYV- 338 (402)
Q Consensus 264 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H---~~~~~~~~~~~~~lgi~~ek~~~~~~~- 338 (402)
+.+.+ ..+.=..+.......|.+.|++.|.++ +|. .++.- ..++.++..+.++-|++.++.+...-.
T Consensus 189 ~G~~D-------~~nMGaAMAPAA~dTI~~h~~D~g~~p-~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG~~ 260 (329)
T PF07451_consen 189 MGIKD-------PNNMGAAMAPAAADTIEQHFKDTGRSP-DDYDLIVTGDLGKVGRKILRDLLKEKGYDISENYNDCGLM 260 (329)
T ss_dssp SS----------TT-HHHHHHHHHHHHHHHHHHHCT--G-GG-SEEEESS-HHHHHHHHHHHHHHTT---GGGEEEHHHC
T ss_pred cCCCC-------cccchhhHhHHHHHHHHHHHHHhCCCh-hhcCeEEecchHHHHHHHHHHHHHHcCCCCccccccCCeE
Confidence 11111 011112334445567888899999997 887 55543 246788899999888887663221100
Q ss_pred -H----Hh--cCCCCcc-hHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEccccc
Q 044410 339 -L----RE--YGNMGAP-SVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLT 386 (402)
Q Consensus 339 -l----~~--~Gn~~sa-si~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~ 386 (402)
+ ++ -|-.|++ |..+...+++++ ++.| ...+||+++.|+=++
T Consensus 261 iyd~~~Qdv~aGGSGcgCSA~V~~g~ll~~------l~~g-~~krvL~vaTGALlS 309 (329)
T PF07451_consen 261 IYDPEKQDVHAGGSGCGCSAVVLCGYLLPK------LRKG-ELKRVLFVATGALLS 309 (329)
T ss_dssp SS-TT-S--TT-EESHHHHHHHHHHCHHHH------HHTT-S-SEEEEEEEEE---
T ss_pred eecCCccccccCCCCcchHHHHHHHHHHHH------HHcC-CceEEEEEEchhhcC
Confidence 0 01 1222322 223333344443 3333 136899999998443
No 118
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=2.7e-10 Score=112.97 Aligned_cols=267 Identities=15% Similarity=0.144 Sum_probs=166.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCC-CCCcc---EEEEEecC-----------------------CC----CCC-C
Q 044410 99 DARQAMLIDEVPKLGKEAALKAIKEWGQP-VSKIT---HLIFSAFY-----------------------GV----DMP-G 146 (402)
Q Consensus 99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~-~~dId---~li~~s~~-----------------------~~----~~p-~ 146 (402)
..+.+++.+....|+..|+++||+++|++ ..+++ .+++++.. |+ .++ .
T Consensus 61 ~~~~~~~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 140 (412)
T COG0304 61 AKKERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNL 140 (412)
T ss_pred chHHhhcccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccch
Confidence 55555678889999999999999999997 33343 23344331 11 122 3
Q ss_pred HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC---------------ccc------c
Q 044410 147 ADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR---------------VLD------F 205 (402)
Q Consensus 147 ~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~---------------s~~------~ 205 (402)
.+..++..+|+... .+.+..+|+++.+|+..|.++|+.|..+.+|+.++|.. +.. .
T Consensus 141 ~a~~vs~~~g~~G~---~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~a 217 (412)
T COG0304 141 AAGNVAIVFGLKGP---NYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKA 217 (412)
T ss_pred HHHHHHHHhCCCCC---cCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCcccc
Confidence 46788999999975 57889999999999999999999999999999999762 111 2
Q ss_pred CCCCccchhhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHH
Q 044410 206 HEPSETHLDVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIG 284 (402)
Q Consensus 206 ~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 284 (402)
.+|.|.++ ..+++|.||+++||+..+.... ......++.+.+.. .++++++... + -.
T Consensus 218 srPfd~~R----dGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~--------------~Da~h~t~P~--p--~g 275 (412)
T COG0304 218 SRPFDKNR----DGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTT--------------SDAYHITAPA--P--DG 275 (412)
T ss_pred CCCCCCCC----CCEEEecceeEEEecChhhHHhCCCceEEEEEEEEec--------------ccccccCCCC--C--CC
Confidence 23444333 3789999999999998765111 11112344443321 1111111100 0 12
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHH-----HHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLL-----DQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVR 358 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~-----~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~ 358 (402)
....++|+.+|+++|+++ ++| |+..|-.+...- ..+.+.++--..+++.+ .+-.-+||+-.|.-.+-+.-.+
T Consensus 276 ~Ga~~am~~AL~~Agl~~-~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vs-stKs~tGH~lGAaGaveai~~~ 353 (412)
T COG0304 276 EGAIRAMRAALADAGLTP-EDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVS-STKSLTGHTLGAAGAVEAIISL 353 (412)
T ss_pred chHHHHHHHHHHHcCCCH-hHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceee-ecccccccChhhHHHHHHHHHH
Confidence 234478899999999998 999 999998765443 34455566322222221 1244578876665443322211
Q ss_pred HhhhhhhcccC-----------------------CCCCceEEEEEEcccccceeeEEee
Q 044410 359 KKSIEEMKATT-----------------------GEGLECGVLFGFGPGLTVETVVLQS 394 (402)
Q Consensus 359 ~~~~~~g~i~~-----------------------G~~~d~vll~~~G~G~~~~~~ll~~ 394 (402)
.. +.+|.+.| .. .+.+|.-+||-|.+-++++++.
T Consensus 354 l~-l~~g~ippt~n~~~~dp~~~~l~~v~~~~~~~~-~~~~lsnsfGFGG~Na~lv~~~ 410 (412)
T COG0304 354 LA-LRDGIIPPTINLDNPDPEAADLDVVPNEARTGA-VRAALSNSFGFGGTNASLVFKR 410 (412)
T ss_pred HH-HhcCCcCCCCCcCCCCcccccccccCCcccccc-eeEEEecccccCCcceEEEEec
Confidence 10 00011110 00 1557778899988888888775
No 119
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.16 E-value=1.9e-09 Score=127.00 Aligned_cols=221 Identities=13% Similarity=0.115 Sum_probs=141.7
Q ss_pred HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c-----CCCCc
Q 044410 147 ADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----HEPSE 210 (402)
Q Consensus 147 ~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-----~~~~~ 210 (402)
.+++|+..||+.+. .+.+..+|+|++.||++|.+.|++|.++.+|+.+++..... + ..|.|
T Consensus 185 ~A~RIS~~f~L~Gp---s~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGGM---NCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 57899999999985 67899999999999999999999999999999998763210 0 12333
Q ss_pred cchhhhhhhhhhccCcEEEEEccCCCCCCCCCCce-EEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHH
Q 044410 211 THLDVLVVQAVFGDGAGAAIIGADSDISNHESPLF-QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDK 289 (402)
Q Consensus 211 ~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 289 (402)
.+. .++++|+|++++||.+-+......+..+ .+.+.+.. .+|....+ ..+. .....+
T Consensus 262 ~~a----dG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~--------------~DG~~~~i--taP~--~~gq~~ 319 (2582)
T TIGR02813 262 IDS----KGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGAS--------------SDGKFKSI--YAPR--PEGQAK 319 (2582)
T ss_pred CCC----CcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEc--------------CCCCCCCC--cCCC--HHHHHH
Confidence 222 3789999999999997654111111122 33333221 11110000 0111 223457
Q ss_pred HHHHhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCc---cccHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410 290 CLSNAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRK---EKLWASRYVLREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 290 ~i~~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~---ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
+|+++|+++|+++ ++| |+-.|..+... ...+.+.++-.. ..++.+ .+-..+||+.+|+-...|-..+-.
T Consensus 320 ~i~~Al~~Agi~p-~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vg-SvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 320 ALKRAYDDAGFAP-HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALG-SVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHcCCCH-HHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceee-ccccccccchHhHHHHHHHHHHHH
Confidence 8999999999998 999 99999865433 556677776432 123322 134588999999887777543311
Q ss_pred hhhhhcccC-------------------------------CCCCceEEEEEEcccccceeeEEeee
Q 044410 361 SIEEMKATT-------------------------------GEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 361 ~~~~g~i~~-------------------------------G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
+.+|.+.+ .....++++-+||-|.+-..++|+-.
T Consensus 398 -l~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 398 -LHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred -HhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 00022211 00125688889999999999999853
No 120
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=1.5e-10 Score=116.59 Aligned_cols=95 Identities=13% Similarity=0.042 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|+++||+++|++++|||.||+++.++ ...+..+..++..+|++.... .++++.+|++++.++..|.++|+
T Consensus 26 ~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p-~~~v~~~CaSg~~al~~A~~~I~ 104 (426)
T PRK08170 26 SASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVP-AWTVQRNCASGMQALDSAAANIA 104 (426)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCce-eeeccchhhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999988765 334677888999999964322 78999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcc
Q 044410 187 NNPGARVLVVCSDIRVL 203 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~ 203 (402)
+|..++|||+++|++|.
T Consensus 105 sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 105 LGRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCCEEEEEEEecccC
Confidence 99999999999998774
No 121
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.13 E-value=2.1e-10 Score=108.18 Aligned_cols=95 Identities=18% Similarity=0.119 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
++.+|+.+|++.+|+++++++++||.|++++..+ ...+..+..+.-..|++.... ++.++..|+|++.|+..|...|+
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp-~~~V~~~CaSG~~Av~~a~~~I~ 103 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP-ATTVNRACASGLQAVHLAAMAIA 103 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE-EEEEE-GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc-eeeehhhhhHHHHHHHHhhhhhc
Confidence 4889999999999999999999999999999988 456778888888999986643 88999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcc
Q 044410 187 NNPGARVLVVCSDIRVL 203 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~ 203 (402)
+|..+.+|++++|++|.
T Consensus 104 sG~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 104 SGEADVVLAGGVESMSR 120 (264)
T ss_dssp TTS-SEEEEEEEEETTT
T ss_pred CCCccEEEEeccccccc
Confidence 99999999999999995
No 122
>PRK07855 lipid-transfer protein; Provisional
Probab=99.04 E-value=1.9e-08 Score=100.06 Aligned_cols=85 Identities=18% Similarity=0.157 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g 188 (402)
..+|+.+|+++||+++|++++|||.+++.+. . ..+. ..+++.||+.+.. ....+..+|+++..++..|...|++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~~~--~~l~~~lGl~~~~-~~~~v~~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TNPE--IAVARALGIGELK-FFSRIHYGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-cccH--HHHHHHCCCCCCc-ceeeecCCcHHHHHHHHHHHHHHHCC
Confidence 6799999999999999999999999986332 1 2222 5688999997622 15678999999999999999999999
Q ss_pred CCCeEEEEEe
Q 044410 189 PGARVLVVCS 198 (402)
Q Consensus 189 ~~~~vLvv~~ 198 (402)
.++.|||++.
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 123
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=98.96 E-value=1.6e-09 Score=100.53 Aligned_cols=94 Identities=18% Similarity=0.109 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~ 187 (402)
+.+|+.-|++.+|+++.++++|++-||+++..+ ...-.++.+.+---||+..+. +..++..|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~-~tTvNkvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVP-ATTVNKVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCccee-eEeehhhhhhhHHHHHHHHHHHhc
Confidence 789999999999999999999999999998877 666677888888889998765 889999999999999999999999
Q ss_pred CCCCeEEEEEeccCcc
Q 044410 188 NPGARVLVVCSDIRVL 203 (402)
Q Consensus 188 g~~~~vLvv~~e~~s~ 203 (402)
|..+.|+..+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999873
No 124
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.93 E-value=2.6e-09 Score=100.73 Aligned_cols=221 Identities=16% Similarity=0.174 Sum_probs=141.1
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCC---Ccc----EEEEEec----------------------CCCCCC----
Q 044410 99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVS---KIT----HLIFSAF----------------------YGVDMP---- 145 (402)
Q Consensus 99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~---dId----~li~~s~----------------------~~~~~p---- 145 (402)
.....+.......|+..|+++||+++++.+. +.| .|.++++ +|+++|
T Consensus 84 s~~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~ 163 (440)
T KOG1394|consen 84 SKGDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILT 163 (440)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhc
Confidence 3445555667899999999999999998654 233 4455544 344455
Q ss_pred -CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc--------------------
Q 044410 146 -GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-------------------- 204 (402)
Q Consensus 146 -~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-------------------- 204 (402)
..+.+|+.++|+... -..++.+|+++.+++--|..+|+.|..+..|..++|.+-..
T Consensus 164 NM~ag~vsm~~gl~Gp---nhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~ 240 (440)
T KOG1394|consen 164 NMAAGYVSMKYGLRGP---NHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQ 240 (440)
T ss_pred ccccchhhhhhcCcCC---chhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCcc
Confidence 346899999999875 57789999999999999999999999999999988876210
Q ss_pred -cCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCC-ceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHH
Q 044410 205 -FHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESP-LFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVA 282 (402)
Q Consensus 205 -~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~ 282 (402)
..+|.|.+|+ .+++|+|++.+||+.-+.......+ ..++++.+- ..+.++++-.. +
T Consensus 241 ~aSRPfD~~Rd----GFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygl--------------s~Da~HiT~P~--~-- 298 (440)
T KOG1394|consen 241 KASRPFDKKRD----GFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGL--------------SSDAYHITSPD--P-- 298 (440)
T ss_pred ccCCCCccCCC----ceeeccceeEEehHhHHHHHHcCCceeHHhhcCcc--------------cccccccCCCC--C--
Confidence 1124444343 7899999999999876541110011 122322211 00111111100 0
Q ss_pred HHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccc--cHHHHHHHHhcCCCCcc
Q 044410 283 IGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEK--LWASRYVLREYGNMGAP 348 (402)
Q Consensus 283 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek--~~~~~~~l~~~Gn~~sa 348 (402)
-......+|+++|+.+|+++ +|| |+-.|..+... .+++.+.|+--... +..+ -.-.||+-.|
T Consensus 299 dG~Ga~~am~raL~~Agl~p-e~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsSt---KgaiGHLLGA 368 (440)
T KOG1394|consen 299 DGAGAVLAMERALKDAGLSP-EDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSST---KGAIGHLLGA 368 (440)
T ss_pred CcchHHHHHHHHHHHcCCCh-hhcCeeecccccCcCchHHHHHHHHHHhccCCcccccccc---cchhhhhccc
Confidence 01234468889999999998 999 99999765443 44556666543333 3222 3455665433
No 125
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.87 E-value=1.1e-08 Score=103.06 Aligned_cols=94 Identities=16% Similarity=0.186 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCC--ccEEEEEecCC-C--CCCCHHHHHHHHcCCC-------CccccceeeccccchHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSK--ITHLIFSAFYG-V--DMPGADVRLMRLLGLK-------PSVNRLMIYTQGCYMGG 175 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~d--Id~li~~s~~~-~--~~p~~a~~i~~~LGl~-------~~~~~~~~i~~~C~~~~ 175 (402)
+..+|+.+|+++||+++|++++| ||.+++++... . ..+..+..++..+|++ ..+ .+.++.+|++++
T Consensus 47 s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p--~~~V~~~caSG~ 124 (438)
T PTZ00455 47 TLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKP--AMRVEGACASGG 124 (438)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCc--eeEEECcCHHHH
Confidence 47899999999999999999999 99999987654 2 2355667777665554 443 789999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeccCcc
Q 044410 176 TVIRLAKDIAENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 176 ~al~~A~~~i~~g~~~~vLvv~~e~~s~ 203 (402)
.|+..|.+.|++|.++.|||+++|++|.
T Consensus 125 ~Ai~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 125 LAVQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 9999999999999999999999998764
No 126
>PRK07937 lipid-transfer protein; Provisional
Probab=98.84 E-value=3.6e-07 Score=89.64 Aligned_cols=240 Identities=14% Similarity=0.002 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCC-CCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410 110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDM-PGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188 (402)
Q Consensus 110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~-p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g 188 (402)
.+|+.+|+++||+++|++++|||.++.++...... ......+...+|+..... ...+. +++..++..|...|++|
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~v~---~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPIN-ESHVE---MDAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCc-eEEec---CcHHHHHHHHHHHHhcC
Confidence 79999999999999999999999885433211211 111234556678743211 23333 46888999999999999
Q ss_pred CCCeEEEEEeccCcc------------c-cCCCCc----------------------c----------------------
Q 044410 189 PGARVLVVCSDIRVL------------D-FHEPSE----------------------T---------------------- 211 (402)
Q Consensus 189 ~~~~vLvv~~e~~s~------------~-~~~~~~----------------------~---------------------- 211 (402)
.++.|||++.|+++. . +..|.. +
T Consensus 101 ~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~r 180 (352)
T PRK07937 101 EVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAEPS 180 (352)
T ss_pred CCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhcc
Confidence 999999999997541 0 100000 0
Q ss_pred -chh------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCc
Q 044410 212 -HLD------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRD 278 (402)
Q Consensus 212 -~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~ 278 (402)
+.+ .+..+...+|||+|+||.+.+...........+.+.+....+.. + . .++
T Consensus 181 it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~pv~I~g~~~~~~~~~---~----~--------~~d 245 (352)
T PRK07937 181 ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERPAWITGIEHRIESPS---L----G--------ARD 245 (352)
T ss_pred CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCcEEEEEEEEeeCCcc---c----c--------ccc
Confidence 000 01122345899999999875431111111244544433211110 0 0 011
Q ss_pred hhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc-ccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410 279 VPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE-KLWASRYVLREYGNMGAPSVFFILDE 356 (402)
Q Consensus 279 v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e-k~~~~~~~l~~~Gn~~sasi~i~L~~ 356 (402)
+.. ....+.+.+++ +|+++ +|| .+=+|-......-...+.||+..+ .+..+=-.+. ||-..++-+..+.+
T Consensus 246 ~~~--~~~~~~a~~~a---Agi~~-~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~--ghp~gatG~~~~~e 317 (352)
T PRK07937 246 LTR--SPSTALAAEAA---TGGDA-GGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA--ANPMFAAGLERIGE 317 (352)
T ss_pred ccc--HHHHHHHHHHh---cCCCH-HHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccchh--cCchhHHHHHHHHH
Confidence 111 11122233333 69997 999 888888776666677899998532 3332211232 88777777778888
Q ss_pred HHHhhhhhhcccCCCCCceEEEEEEcc
Q 044410 357 VRKKSIEEMKATTGEGLECGVLFGFGP 383 (402)
Q Consensus 357 ~~~~~~~~g~i~~G~~~d~vll~~~G~ 383 (402)
+..+ ++.+ ..++.|..+.|.
T Consensus 318 ~~~Q------L~g~-~a~~~l~~~~Gg 337 (352)
T PRK07937 318 AARH------IWDG-SARRALAHATSG 337 (352)
T ss_pred HHHH------Hhcc-CCCEEEEecccc
Confidence 7765 2211 126777777664
No 127
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.83 E-value=2.3e-08 Score=93.66 Aligned_cols=132 Identities=21% Similarity=0.248 Sum_probs=91.9
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCc-----cEEEEEecCC-C---------------C--------CC-
Q 044410 96 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI-----THLIFSAFYG-V---------------D--------MP- 145 (402)
Q Consensus 96 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dI-----d~li~~s~~~-~---------------~--------~p- 145 (402)
+.+..+.....+....|+..|+.+||+++|++++++ -.|+++++.. + . +|
T Consensus 74 ~~~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T PF00109_consen 74 FGIPPREARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPN 153 (254)
T ss_dssp TCHHHHHHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTT
T ss_pred ccccchhhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCccccc
Confidence 444555455666788999999999999999988533 2355555433 1 0 22
Q ss_pred CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecc-Ccc---------ccC------CCC
Q 044410 146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI-RVL---------DFH------EPS 209 (402)
Q Consensus 146 ~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~-~s~---------~~~------~~~ 209 (402)
..+.+|+..+|+... .+.+..+|++++.||..|..+|++|..+.|||.++|. .+. ... .|.
T Consensus 154 ~~a~~ia~~~gl~G~---~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf 230 (254)
T PF00109_consen 154 SAAGRIAILFGLRGP---SYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPF 230 (254)
T ss_dssp HHHHHHHHHHTB-SS---EEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGST
T ss_pred ccccchhhhcCCCCc---cccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccc
Confidence 257799999999986 5789999999999999999999999999999999994 321 000 122
Q ss_pred ccchhhhhhhhhhccCcEEEEEccC
Q 044410 210 ETHLDVLVVQAVFGDGAGAAIIGAD 234 (402)
Q Consensus 210 ~~~~~~~~~~~lfGDGAaA~vL~~~ 234 (402)
++ . ...+++|+||+++||++.
T Consensus 231 ~~--~--~~G~v~gEGa~~~vLe~~ 251 (254)
T PF00109_consen 231 DP--F--ADGFVLGEGAGALVLERL 251 (254)
T ss_dssp BT--T--B-SB-BB-EEEEEEEEEH
T ss_pred CC--C--CCCEEEECceEEEEEEEh
Confidence 21 1 257899999999999864
No 128
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.74 E-value=5.3e-08 Score=98.03 Aligned_cols=95 Identities=11% Similarity=-0.026 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
+..+|+.+|++++|+++|++++|||.+++++..+ ...+..+..+.-..|++... +.+.++++|++++.++..|...|+
T Consensus 30 ~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~-p~~~V~~~CaSG~~ai~~A~~~I~ 108 (427)
T PRK09268 30 SNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYT-PAYDLQQACGTGLEAAILVANKIA 108 (427)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCC-ceeeeechhhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999997654 22244566655566665422 278899999999999999999999
Q ss_pred cCCCCeEEEEEeccCcc
Q 044410 187 NNPGARVLVVCSDIRVL 203 (402)
Q Consensus 187 ~g~~~~vLvv~~e~~s~ 203 (402)
+|..+.+||++.|.+|.
T Consensus 109 sG~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 109 LGQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCCEEEEeeEEccCC
Confidence 99999999999999884
No 129
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.69 E-value=7.4e-07 Score=98.86 Aligned_cols=347 Identities=17% Similarity=0.153 Sum_probs=197.9
Q ss_pred CCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeeccc-----chhHhhhCCCCccCCC
Q 044410 21 GPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL-----TEEILKENPNMCCYEA 95 (402)
Q Consensus 21 ~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~-----~~~~~~~~~~~~~~~~ 95 (402)
.| |-|+|++..+|. .-+.+++.+.+.+ ..+...++. ..+|=.+..+-..+.... ....++.-..+ +...
T Consensus 4 ~~-IAIiGm~~rfPg-a~~~~~~W~~l~~--g~~~i~~ip-~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~F-D~~f 77 (1061)
T COG3321 4 EP-IAIIGMACRFPG-ADSPEEFWDLLKE--GRDEITEVP-ADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDF-DALF 77 (1061)
T ss_pred Cc-EEEEeccccCCC-CCCHHHHHHHHhc--CCceeeecC-hhhhhHhhccCCccccccccccccccccCCcccc-CHHH
Confidence 45 899999999999 6677888877642 111111110 012322222222221111 00000000000 0001
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-CCCC-------------------CHHHHH
Q 044410 96 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-VDMP-------------------GADVRL 151 (402)
Q Consensus 96 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~~~p-------------------~~a~~i 151 (402)
=.+..|....++--..|..+.+.+||+++|+.++.+. .|+.+.+.. |... ..+++|
T Consensus 78 FgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Ri 157 (1061)
T COG3321 78 FGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRI 157 (1061)
T ss_pred cCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHH
Confidence 1233444555555666999999999999999998887 455555443 3111 267899
Q ss_pred HHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----c-----CCCCcc--chhhhhhh
Q 044410 152 MRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----F-----HEPSET--HLDVLVVQ 219 (402)
Q Consensus 152 ~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----~-----~~~~~~--~~~~~~~~ 219 (402)
+..|++.+. ...+..+|++.+.|+++|.+.|.+|+++.+|+.+....-.. | ..|+.. ..+.....
T Consensus 158 sy~l~l~GP---s~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG 234 (1061)
T COG3321 158 SYVLGLSGP---SVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADG 234 (1061)
T ss_pred HHHhcCCCC---CccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCC
Confidence 999999975 67899999999999999999999999999998887664210 0 011100 00111236
Q ss_pred hhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCC
Q 044410 220 AVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIG 299 (402)
Q Consensus 220 ~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g 299 (402)
++.|.|++++||.+-.....-.+..+.++.. +.. ..+|... |-..+. ...-..+++++|+++|
T Consensus 235 ~v~geG~g~vvLKrl~~A~~dgd~IyavI~g-sav------------n~dG~~~--gltaP~--~~aQ~~v~~~al~~a~ 297 (1061)
T COG3321 235 YVRGEGAGVVVLKRLSDAERDGDRIYAVIRG-SAV------------NQDGRSN--GLTAPN--LEAQADVIREALADAG 297 (1061)
T ss_pred EEEeeeEEEEEEEEhHHHHhCCCeEEEEEEe-eee------------ccCCCcC--CCCCCC--HHHHHHHHHHHHHhcC
Confidence 7999999999998754411111222333211 110 1111100 111221 2345678999999999
Q ss_pred CCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCc-cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccC---
Q 044410 300 ISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRK-EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT--- 369 (402)
Q Consensus 300 l~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~-ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~--- 369 (402)
+++ .+| |+=.|..+..+ +..+.+.++-.. +....--.+-.+.||+.+|.-...|-...-. +..+.+.+
T Consensus 298 i~p-~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~La-l~~~~ip~~l~ 375 (1061)
T COG3321 298 IDP-ATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALA-LKHGYIPPTLH 375 (1061)
T ss_pred CCc-ccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHh-hhcCccCCcCC
Confidence 998 999 99899866444 444555555332 2222111234578998887766665433321 11133221
Q ss_pred --------------------------CCCCceEEEEEEcccccceeeEEeee
Q 044410 370 --------------------------GEGLECGVLFGFGPGLTVETVVLQSV 395 (402)
Q Consensus 370 --------------------------G~~~d~vll~~~G~G~~~~~~ll~~~ 395 (402)
...+.+.-+-+||.|.|-.-++++..
T Consensus 376 ~~~~np~i~~~~sp~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~ 427 (1061)
T COG3321 376 FDTPNPEIDFDSSPFVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEA 427 (1061)
T ss_pred CCCCCcCCccccCCeEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeec
Confidence 10125677888998888888888753
No 130
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=98.43 E-value=1.9e-06 Score=80.15 Aligned_cols=94 Identities=11% Similarity=0.046 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHH-cCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRL-LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~-LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~ 187 (402)
+-+|...+.+..+++.+++|+.|.-|+++++..-......++++.. -|++..+. ...++-.|+++++|+...+.-|++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvp-v~tvNRqCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADIAAKIRA 139 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccc-hhhhhhhhhhHHHHHHHHHHHHhc
Confidence 5678889999999999999999999999998652222555666554 48887653 777899999999999999999999
Q ss_pred CCCCeEEEEEeccCcc
Q 044410 188 NPGARVLVVCSDIRVL 203 (402)
Q Consensus 188 g~~~~vLvv~~e~~s~ 203 (402)
|.++..|-.+.|.++.
T Consensus 140 G~ydIGla~GvESMt~ 155 (435)
T KOG1389|consen 140 GFYDIGLAAGVESMTT 155 (435)
T ss_pred Cceeeecccchhhhcc
Confidence 9999999999998874
No 131
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.13 E-value=9.8e-06 Score=80.83 Aligned_cols=94 Identities=15% Similarity=0.127 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHc--CCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEW--GQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~a--g~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
..+|.....+..+++. ++++.+||.++.++..+ ......+..++..+|++.... .+.++.+|++++.|+..|.+.
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p-~~~V~~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVP-AVTVNRACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCC-ceEEeccchhHHHHHHHHHHH
Confidence 4555555555565433 57777899999987776 356788899999999996332 889999999999999999999
Q ss_pred HHcCCCCeEEEEEeccCcc
Q 044410 185 AENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 185 i~~g~~~~vLvv~~e~~s~ 203 (402)
|++|..+.||+++.|++|.
T Consensus 106 I~sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 106 IASGEADVVLAGGVEKMSD 124 (392)
T ss_pred HHCCCCCEEEEEeeeeccC
Confidence 9999999999999999985
No 132
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.91 E-value=1.5e-05 Score=72.77 Aligned_cols=91 Identities=22% Similarity=0.307 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g 188 (402)
-.||+.+|..+||+++++.-++|+--+++-..+. .....+-.-++|+..-+ .+.++++|+++-.||-+|+++|++|
T Consensus 29 ypd~a~ea~tkal~da~ikys~vqqa~vgyvfgd--stcgqraiyevgmtgip--i~nvnnncatgssalflakqiiesg 104 (408)
T KOG1406|consen 29 YPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGD--STCGQRAIYEVGMTGIP--IYNVNNNCATGSSALFLAKQIIESG 104 (408)
T ss_pred CchHHHHHHHHHHHhcCCCHHHHHhhhheeeecC--CccchHHHHhccccCcc--eeeccCccccCchHHHHHHHHHhcC
Confidence 5689999999999999999999885544433221 11223444578998876 8999999999999999999999999
Q ss_pred CCCeEEEEEeccCcc
Q 044410 189 PGARVLVVCSDIRVL 203 (402)
Q Consensus 189 ~~~~vLvv~~e~~s~ 203 (402)
..+.||..+.|++++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999863
No 133
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.54 E-value=0.00014 Score=66.33 Aligned_cols=95 Identities=16% Similarity=0.056 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
++.+|..-|++.||+.+++.++.+|.||++.... ...-.++..+.-+.|.+.... +..++.=|.++++++-.+.+-|
T Consensus 27 ~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~p-ALtiNRLCGSGFQsiVNgaQ~I 105 (396)
T KOG1391|consen 27 SATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETP-ALTINRLCGSGFQSIVNGAQEI 105 (396)
T ss_pred chhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccC-ceeehhhhcccHHHHHhhHHHh
Confidence 4789999999999999999999999999886532 111223455555667776653 8889999999999999999999
Q ss_pred HcCCCCeEEEEEeccCcc
Q 044410 186 ENNPGARVLVVCSDIRVL 203 (402)
Q Consensus 186 ~~g~~~~vLvv~~e~~s~ 203 (402)
.-|..+.||.-+.|.+|.
T Consensus 106 ~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 106 CVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hcCcceEEEecCcccccc
Confidence 999999999999999973
No 134
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.05 E-value=0.00048 Score=63.79 Aligned_cols=93 Identities=11% Similarity=0.130 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~ 187 (402)
+.+|+.+|...+|++..++.+.||.||+++... .-...++..-+-.-|++...+ +..+.++|-+.-.|+-....+|.+
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktp-ahtvtmacissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTP-AHTVTMACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCc-cceeeeehhccchhhhccceeEee
Confidence 678999999999999999999999999999876 455667777777778887653 889999999999999999999999
Q ss_pred CCCCeEEEEEeccCc
Q 044410 188 NPGARVLVVCSDIRV 202 (402)
Q Consensus 188 g~~~~vLvv~~e~~s 202 (402)
|.++.++..+.|.+|
T Consensus 145 g~~dvivaggvelms 159 (465)
T KOG1392|consen 145 GNADVIVAGGVELMS 159 (465)
T ss_pred CCcCEEEEcceeecc
Confidence 999998888888887
No 135
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.99 E-value=0.0044 Score=58.71 Aligned_cols=53 Identities=23% Similarity=0.304 Sum_probs=38.8
Q ss_pred HHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410 339 LREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS 396 (402)
Q Consensus 339 l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~ 396 (402)
-++.||+.+||++++|..++.... ...-.| ++|+|+|+|+|......-+++.+
T Consensus 151 ~~~vGN~YTaSly~~L~SlL~~~~--~~~l~G---krI~~FSYGSG~~s~~fs~~v~~ 203 (282)
T PF08540_consen 151 SRQVGNMYTASLYLGLASLLSSAE--ADDLAG---KRIGMFSYGSGLASEFFSGRVQP 203 (282)
T ss_dssp HHHHB--GGGHHHHHHHHHHHHHH--SCHHTT----EEEEEEEETTTEEEEEEEEE-T
T ss_pred HHHcCceehHHHHHHHHHHhhccC--ccccCC---CEEEEEEecCCcceeEEEEEEeC
Confidence 468899999999999999994211 233467 99999999999998877777654
No 136
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=96.35 E-value=0.036 Score=50.61 Aligned_cols=115 Identities=17% Similarity=0.058 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCC----------------CCC---------CHHHHHHHHcCCCCccc
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV----------------DMP---------GADVRLMRLLGLKPSVN 162 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~----------------~~p---------~~a~~i~~~LGl~~~~~ 162 (402)
....|+..++.+++++. +++|.+||+|..+. .-| ..+.++.-..|....
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~-- 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGP-- 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCc--
Confidence 47889999999988653 57789999987430 112 234555555565543
Q ss_pred cceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCC
Q 044410 163 RLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD 236 (402)
Q Consensus 163 ~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~ 236 (402)
...+..+=.++..||.-|..++..| .+.||||+.|......+..... ......--|.|++|++++.
T Consensus 107 -~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~------~~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 107 -NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRP------ERDPPFPYALALVLSPGDS 172 (218)
T ss_pred -eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhccc------ccCCCcCEEEEEEecCCCC
Confidence 4567888899999999999999999 8999999999976533221100 0112234577788887655
No 137
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=95.97 E-value=0.031 Score=46.25 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=65.2
Q ss_pred HHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410 288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK 366 (402)
Q Consensus 288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~ 366 (402)
..+++++|+++|++. +|+ .|=.|-.-....-...+.||++++++..+= -.--+||...||=...+.+++.+..
T Consensus 25 ~~A~~~al~~ag~~~-~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~G-G~la~GHP~gasG~r~~~~l~~~L~---- 98 (123)
T PF02803_consen 25 VPAARKALERAGLTP-DDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNG-GALALGHPLGASGARLVVELAHQLR---- 98 (123)
T ss_dssp HHHHHHHHHHHT--G-GGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT---HHHH-BHTTTHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHhCCCc-cccchhhccchhhhHHHHhhccccccccccCccc-ccccccccccccccchhhhhHHHHH----
Confidence 357788999999997 999 999999887777788899999999887641 2335899998888777777776521
Q ss_pred ccCCCCCceEEEEEEcccccceeeEEe
Q 044410 367 ATTGEGLECGVLFGFGPGLTVETVVLQ 393 (402)
Q Consensus 367 i~~G~~~d~vll~~~G~G~~~~~~ll~ 393 (402)
-+.| ++.+...-+.|..-.+++++
T Consensus 99 ~~~~---~~gla~~~~ggG~g~a~lle 122 (123)
T PF02803_consen 99 RRGG---RYGLAAICAGGGQGSAVLLE 122 (123)
T ss_dssp HHTT---SEEEEEEEETTTEEEEEEEE
T ss_pred Hhch---hhhhHHhcccceeeEEEEEE
Confidence 1234 66565555555555566765
No 138
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.87 E-value=0.034 Score=60.82 Aligned_cols=258 Identities=17% Similarity=0.212 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC---C---CCCC----------HHHHHHHHc----CCCCccccc
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG---V---DMPG----------ADVRLMRLL----GLKPSVNRL 164 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~---~---~~p~----------~a~~i~~~L----Gl~~~~~~~ 164 (402)
-..|..++..+|+-++|++|.++. .+..+.+.+ . ..|. .-.+.++++ .+.+. .
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGP---S 163 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGP---S 163 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCC---c
Confidence 567999999999999999998875 344433322 1 1121 112333433 44543 6
Q ss_pred eeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCc-----cccC-----CCCcc--chhhhhhhhhhccCcEEEEEc
Q 044410 165 MIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV-----LDFH-----EPSET--HLDVLVVQAVFGDGAGAAIIG 232 (402)
Q Consensus 165 ~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s-----~~~~-----~~~~~--~~~~~~~~~lfGDGAaA~vL~ 232 (402)
+.+..+|++.+.||+.|.+-+++|.++.+||-+....- ..|. .|+-. ..+.....+.-+||.+|++|.
T Consensus 164 ~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllq 243 (2376)
T KOG1202|consen 164 FSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQ 243 (2376)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEe
Confidence 77899999999999999999999999999988876532 1111 11100 011122345667999999998
Q ss_pred cCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEc
Q 044410 233 ADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVH 311 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H 311 (402)
+....... ...++...+ ++++ .++.|. ++ + ..+.-..++++..+++|+.| +++ |+=.|
T Consensus 244 rk~~ArRv---YAtilnart----NTDG-----fKEqGv--Tf----P--~G~~Q~qLi~e~Yse~Gl~P-~sv~YvEAH 302 (2376)
T KOG1202|consen 244 RKSLARRV---YATILNART----NTDG-----FKEQGV--TF----P--SGDMQEQLIRETYSEAGLNP-ESVVYVEAH 302 (2376)
T ss_pred hhHHHHHH---HHHhhcccc----CCCc-----hhhcCc--cC----C--CcHHHHHHHHHHHHhcCCCc-ccEEEEEec
Confidence 76541110 112222111 1111 011221 11 1 12223467889999999998 998 88889
Q ss_pred CCCHHH-----HHHHHHHcCCCccc--cHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc----------------
Q 044410 312 PGGDGL-----LDQVEKTLGLRKEK--LWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT---------------- 368 (402)
Q Consensus 312 ~~~~~~-----~~~~~~~lgi~~ek--~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~---------------- 368 (402)
..+.++ ...+.+.+=-++.. ..-+ +-.+.||.-.||-.-+|+..+-. .++|.+.
T Consensus 303 GtGTkVGDpQEaN~it~~fC~~Rt~pLLIGS--vKSNMGHaEPASGv~alaKills-mE~glip~NLHy~tPNp~ip~L~ 379 (2376)
T KOG1202|consen 303 GTGTKVGDPQEANGITRFFCATRTTPLLIGS--VKSNMGHAEPASGVCALAKILLS-MEEGLIPPNLHYNTPNPEIPALV 379 (2376)
T ss_pred cCCCCCCChHHhhhHHHHHhhcCCCceEeee--ccccCCCCCccchHHHHHHHHHH-HHhCcCCCccccCCCCCCcchhc
Confidence 765443 22233332111111 1111 23467887777777666654432 1113332
Q ss_pred -------------CCCCCceEEEEEEcccccceeeEEeeec
Q 044410 369 -------------TGEGLECGVLFGFGPGLTVETVVLQSVS 396 (402)
Q Consensus 369 -------------~G~~~d~vll~~~G~G~~~~~~ll~~~~ 396 (402)
+| ..|-+-+||-|.+-.-++|+-..
T Consensus 380 dGrLkVVd~~lp~~G---GivGiNSFGFGGsN~HviLks~~ 417 (2376)
T KOG1202|consen 380 DGRLKVVDRPLPWRG---GIVGINSFGFGGSNAHVILKSNT 417 (2376)
T ss_pred cceeEEecCCCCccC---ceeeeeccccCCCceeEEeccCC
Confidence 24 57888899998888888887543
No 139
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=95.09 E-value=0.036 Score=42.96 Aligned_cols=74 Identities=20% Similarity=0.128 Sum_probs=44.2
Q ss_pred HHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHHHHcCCCCeEEEE
Q 044410 121 IKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKDIAENNPGARVLVV 196 (402)
Q Consensus 121 L~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~~i~~g~~~~vLvv 196 (402)
|+++|++++|||.++....+ ......+.+.+|++.... ... -+.+|++-+.+|..+..-=+-.+.+++|++
T Consensus 1 L~~~g~~~~did~~i~hq~~----~~~~~~~~~~lgi~~~~~-~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~ 75 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS----KKILDSIAKRLGIPPERF-PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV 75 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS----HHHHHHHHHHHTS-GGGB-E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCC----HHHHHHHHHHcCCcHHHH-HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 68999999999999986532 234456889999986532 111 245666666666554442222357899988
Q ss_pred Eec
Q 044410 197 CSD 199 (402)
Q Consensus 197 ~~e 199 (402)
+.-
T Consensus 76 ~~G 78 (90)
T PF08541_consen 76 GFG 78 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 140
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=94.86 E-value=0.1 Score=52.85 Aligned_cols=70 Identities=13% Similarity=0.055 Sum_probs=41.4
Q ss_pred HHHHHHhhccCCCCCCcce-EEEEcCCCHHH-HHHHH--HHcC--------------CCccccHHHHHHHHhcCCCCcch
Q 044410 288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGL-LDQVE--KTLG--------------LRKEKLWASRYVLREYGNMGAPS 349 (402)
Q Consensus 288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~-~~~~~--~~lg--------------i~~ek~~~~~~~l~~~Gn~~sas 349 (402)
..+++++|+++|+++ +|| .+-+|-.-... +-.+. +.|| ++.+++..+ -=.--+||...|+
T Consensus 310 ~~a~~~al~~aGl~~-~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~-GG~la~GHP~GAt 387 (426)
T PRK08170 310 VHAATPLLQRHGLTL-EDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVD-GGAIALGHPVGAS 387 (426)
T ss_pred HHHHHHHHHHcCCCH-HHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCC-CCHHHhCCCccCc
Confidence 468889999999997 999 88888664332 21111 2222 333344332 1123479998877
Q ss_pred HHHHHHHHHH
Q 044410 350 VFFILDEVRK 359 (402)
Q Consensus 350 i~i~L~~~~~ 359 (402)
=...+.++.+
T Consensus 388 G~~~~~~l~~ 397 (426)
T PRK08170 388 GARIVLHLLH 397 (426)
T ss_pred cHHHHHHHHH
Confidence 7544444444
No 141
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.63 E-value=0.34 Score=48.23 Aligned_cols=91 Identities=9% Similarity=0.031 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHc-----CCCCcccc-ce-e-eccccchHHHHH
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLL-----GLKPSVNR-LM-I-YTQGCYMGGTVI 178 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~L-----Gl~~~~~~-~~-~-i~~~C~~~~~al 178 (402)
+...+...++++++|+++|+.++|||.++....+ +..-..+.++| |++.+... .+ . -+.+|++...+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n----~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSS----EYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCccc----HHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 4455677889999999999999999998864432 22335666766 88754210 11 1 355777777787
Q ss_pred HHHHHHHHcCCCCeEEEEEeccC
Q 044410 179 RLAKDIAENNPGARVLVVCSDIR 201 (402)
Q Consensus 179 ~~A~~~i~~g~~~~vLvv~~e~~ 201 (402)
..+..-=+-.+.++|++++.+..
T Consensus 344 ~~a~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 344 DELLNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHHHcCCCCCCCEEEEEEeccc
Confidence 65532111124688888876654
No 142
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=93.21 E-value=0.6 Score=47.43 Aligned_cols=71 Identities=17% Similarity=0.083 Sum_probs=52.2
Q ss_pred HHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc------------------ccHHHHHHHHhcCCCCcc
Q 044410 288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE------------------KLWASRYVLREYGNMGAP 348 (402)
Q Consensus 288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e------------------k~~~~~~~l~~~Gn~~sa 348 (402)
...++++++++|+++ +|| .+=+|-.-....-...+.||+.+. ++..+ -=+-.+||...|
T Consensus 312 ~~A~~~a~~~AGl~~-~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~GHP~gA 389 (438)
T PTZ00455 312 RAAAQKALSMAGVKP-SDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTG-GGLLSFGHPVGA 389 (438)
T ss_pred HHHHHHHHHHcCCCH-HHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCC-CchhhcCCCcch
Confidence 467889999999997 999 888888766666677889998762 23221 112357999988
Q ss_pred hHHHHHHHHHHh
Q 044410 349 SVFFILDEVRKK 360 (402)
Q Consensus 349 si~i~L~~~~~~ 360 (402)
+-...+.++..+
T Consensus 390 tG~~~v~e~~~Q 401 (438)
T PTZ00455 390 TGVKQIMEVYRQ 401 (438)
T ss_pred HHHHHHHHHHHH
Confidence 887777777664
No 143
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.09 E-value=0.29 Score=47.69 Aligned_cols=85 Identities=19% Similarity=0.238 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-ce--eeccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LM--IYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~--~i~~~C~~~~~al~~A~~~ 184 (402)
.......++.+++|+++|++++|||.+++.... +..-..+.+.||++..... .+ --+.++++.+.+|..+
T Consensus 236 ~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~----~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~--- 308 (338)
T PRK09258 236 EGVELAVDTWEAFLAQLGWAVEQVDRVICHQVG----AAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA--- 308 (338)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCC----HHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH---
Confidence 455677788999999999999999988875432 2344688899999864311 11 1244556666666544
Q ss_pred HHcC---CCCeEEEEEec
Q 044410 185 AENN---PGARVLVVCSD 199 (402)
Q Consensus 185 i~~g---~~~~vLvv~~e 199 (402)
++.| +.+++|+++..
T Consensus 309 ~~~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 309 AEEGFLKPGDRVALLGIG 326 (338)
T ss_pred HHhCCCCCCCEEEEEEec
Confidence 3333 46888887744
No 144
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=92.62 E-value=0.31 Score=47.03 Aligned_cols=82 Identities=12% Similarity=0.022 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY----TQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i----~~~C~~~~~al~~A~~~ 184 (402)
..+-..++.+++|+++|++++|||.+++... .+..-..+++.||++.+.. ...+ +.+|++.+.+|..+
T Consensus 217 ~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~-~~~~~~~Gn~~sas~~~~L~~~--- 288 (318)
T TIGR00747 217 AVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQV-VKTVHKYGNTSAASIPLALDEL--- 288 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHe-eehHhhhCCHHHHHHHHHHHHH---
Confidence 3455677899999999999999999986432 2334567899999986431 1122 34555555555443
Q ss_pred HHcC---CCCeEEEEEe
Q 044410 185 AENN---PGARVLVVCS 198 (402)
Q Consensus 185 i~~g---~~~~vLvv~~ 198 (402)
+++| +.+++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3343 4578887774
No 145
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=92.59 E-value=0.41 Score=47.00 Aligned_cols=82 Identities=22% Similarity=0.174 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-----eeeccccchHHHHHHHHHHH
Q 044410 110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL-----MIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~-----~~i~~~C~~~~~al~~A~~~ 184 (402)
...+..+++++|+++|++++|||.+++...+. .+-..+.+.||++...... -.-+.++++...+|..+...
T Consensus 207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~----~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~ 282 (345)
T TIGR00748 207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG----KFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI 282 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh----HHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh
Confidence 44556889999999999999999998754322 2445688999997642111 11355778888888766553
Q ss_pred HHcCCCCeEEEEE
Q 044410 185 AENNPGARVLVVC 197 (402)
Q Consensus 185 i~~g~~~~vLvv~ 197 (402)
++ +.++||+++
T Consensus 283 ~~--~Gd~vll~~ 293 (345)
T TIGR00748 283 AE--PGDRILAVS 293 (345)
T ss_pred cC--CCCEEEEEE
Confidence 33 456777666
No 146
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.13 E-value=0.63 Score=45.18 Aligned_cols=83 Identities=12% Similarity=0.020 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--eccccchHHHHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LMI--YTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~~--i~~~C~~~~~al~~A~~~ 184 (402)
.......++.+++|+++|++++|||.+++...+. ..-..+++.||++..... .+. -+.+|++.+.+|.. +
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~~----~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~---~ 299 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASG----PAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE---A 299 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH----HHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---H
Confidence 4556677899999999999999999988744322 234688999999864311 011 13344445555543 4
Q ss_pred HHcC---CCCeEEEEE
Q 044410 185 AENN---PGARVLVVC 197 (402)
Q Consensus 185 i~~g---~~~~vLvv~ 197 (402)
++.| +.+++|+++
T Consensus 300 ~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 300 IKQKKVQRGNKILLLG 315 (329)
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4444 467888776
No 147
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=92.11 E-value=0.4 Score=46.46 Aligned_cols=83 Identities=10% Similarity=0.061 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--eccccchHHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LMI--YTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~~--i~~~C~~~~~al~~A~~~i 185 (402)
..+...++.+++|+++|++++|||.+++... .+..-..+.++||++..... .+. -+.++++...+|..+ +
T Consensus 225 ~~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~---~ 297 (326)
T PRK05963 225 AVRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA---N 297 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH---H
Confidence 4556678899999999999999999887332 23345678899999865310 001 133445555555433 3
Q ss_pred HcC---CCCeEEEEEe
Q 044410 186 ENN---PGARVLVVCS 198 (402)
Q Consensus 186 ~~g---~~~~vLvv~~ 198 (402)
+.+ +.+++|+++.
T Consensus 298 ~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 298 LEQPLREGERLLFAAA 313 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 333 4678888874
No 148
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=91.99 E-value=0.97 Score=45.76 Aligned_cols=97 Identities=13% Similarity=0.037 Sum_probs=54.9
Q ss_pred HHHHHhhccCCCCCCcce-EEEEcCCCHHH-HHHH--HHHcCCC------------ccccHHHH-HHHHhcCCCCcchHH
Q 044410 289 KCLSNAMSPIGISDWNSL-FYVVHPGGDGL-LDQV--EKTLGLR------------KEKLWASR-YVLREYGNMGAPSVF 351 (402)
Q Consensus 289 ~~i~~~L~~~gl~~~~di-~~i~H~~~~~~-~~~~--~~~lgi~------------~ek~~~~~-~~l~~~Gn~~sasi~ 351 (402)
..++++++++|+++ +|| .+=+|-.-... +-.+ .+.||+- .++.+.|. --.-.+||...|+-.
T Consensus 313 ~a~~~a~~~AGl~~-~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~ 391 (427)
T PRK09268 313 YAVPRLLARNGLTL-QDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGG 391 (427)
T ss_pred HHHHHHHHHcCCCH-HHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchH
Confidence 47788999999997 999 88777654333 1121 2434432 11223220 011237899888877
Q ss_pred HHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEe
Q 044410 352 FILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393 (402)
Q Consensus 352 i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~ 393 (402)
..+.++..+.. + +.| .+.+...-+.|..-.+++++
T Consensus 392 ~~v~e~~~QL~--~--~~~---~~gl~~~c~~gG~g~a~~~e 426 (427)
T PRK09268 392 RIVATLAKLLA--E--KGS---GRGLISICAAGGQGVTAILE 426 (427)
T ss_pred HHHHHHHHHHH--h--cCC---CEEEEEEcccCchheEEEEe
Confidence 77777776521 1 223 56555444444444556665
No 149
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.01 E-value=0.96 Score=43.72 Aligned_cols=82 Identities=13% Similarity=0.040 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-ee--eccccchHHHHHHHHHHHHH
Q 044410 110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL-MI--YTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~-~~--i~~~C~~~~~al~~A~~~i~ 186 (402)
.+...++.+++|+++|++++|||.+++.... +.....++++||++...... +. -+.+|++.+.+|. .+++
T Consensus 224 ~~~~~~~i~~~L~~~g~~~~did~~~~h~~~----~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~~ 296 (325)
T PRK12879 224 VRTMPKGARQVLEKAGLTKDDIDWVIPHQAN----LRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LALE 296 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHHH
Confidence 4455678899999999999999999875432 33446789999997543111 11 2334555666664 3345
Q ss_pred cC---CCCeEEEEEe
Q 044410 187 NN---PGARVLVVCS 198 (402)
Q Consensus 187 ~g---~~~~vLvv~~ 198 (402)
.| +.+++|+++.
T Consensus 297 ~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 297 QGKIKPGDTLLLYGF 311 (325)
T ss_pred cCCCCCCCEEEEEEE
Confidence 54 4578887774
No 150
>PRK06840 hypothetical protein; Validated
Probab=90.42 E-value=0.95 Score=44.13 Aligned_cols=82 Identities=18% Similarity=0.114 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee--eccccchHHHHHHHHHHHHHc
Q 044410 110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI--YTQGCYMGGTVIRLAKDIAEN 187 (402)
Q Consensus 110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~--i~~~C~~~~~al~~A~~~i~~ 187 (402)
.....++.+++|+++|++++|||.++..... +..-..++++||++........ -+.++++.+.+|.. ++++
T Consensus 236 ~~~~~~~i~~~L~~~gl~~~did~~~~h~~~----~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~---~~~~ 308 (339)
T PRK06840 236 IPNFLKVIREALRKSGYTPKDIDYLAILHMK----RSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHL---ALEQ 308 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCcC----HHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHH---HHHc
Confidence 3455789999999999999999998764432 2333568999999864311111 23345555555543 3444
Q ss_pred C---CCCeEEEEEe
Q 044410 188 N---PGARVLVVCS 198 (402)
Q Consensus 188 g---~~~~vLvv~~ 198 (402)
+ +.+++|+++.
T Consensus 309 ~~~~~Gd~ill~~~ 322 (339)
T PRK06840 309 GKLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 4678887774
No 151
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=90.38 E-value=0.23 Score=40.67 Aligned_cols=74 Identities=19% Similarity=0.269 Sum_probs=46.3
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCc--cccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRK--EKLWASRYVLREYGNMGAPSVFFILDE 356 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~--ek~~~~~~~l~~~Gn~~sasi~i~L~~ 356 (402)
..+.++|+++|+++|+++ ++| ++..|-.+....+. +.+.++-.. ..++.+ .+-..+||+.+++-++.|..
T Consensus 25 ~~~~~~i~~al~~agi~~-~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~Gh~~~asG~~~l~~ 102 (119)
T PF02801_consen 25 AALARAIRRALADAGISP-EDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVG-SVKSNIGHTEAASGLLSLAK 102 (119)
T ss_dssp HHHHHHHHHHHHHHTS-G-GGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE--THHHH-B-GGGHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccc-ccceeeeeeccccccchhhhhhhhhhhhccccccccccee-ccccccccccccchHHHHHH
Confidence 456678999999999997 999 99999888776554 344455332 123332 13568999999999999887
Q ss_pred HHHh
Q 044410 357 VRKK 360 (402)
Q Consensus 357 ~~~~ 360 (402)
.+-.
T Consensus 103 ~~l~ 106 (119)
T PF02801_consen 103 ALLA 106 (119)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 152
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=90.11 E-value=1.1 Score=43.34 Aligned_cols=80 Identities=11% Similarity=0.057 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHHHH
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~~i~ 186 (402)
....++++++|+++|++++|||.+++.... ......+++.||++.... ... -+.+|++.+.+|..+ ++
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~-~~~l~~~Gn~~sasi~~~L~~~---~~ 297 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKM-ITNLEKYGNTSAASIPLALDEA---IQ 297 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHh-hhHHHhhCcHHHHHHHHHHHHH---HH
Confidence 446677899999999999999998875432 234467899999985432 111 234555666666544 34
Q ss_pred cC---CCCeEEEEEe
Q 044410 187 NN---PGARVLVVCS 198 (402)
Q Consensus 187 ~g---~~~~vLvv~~ 198 (402)
.| +.+++|+++.
T Consensus 298 ~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 298 NNKIQPGQIIVLSGF 312 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 43 4678887773
No 153
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=89.95 E-value=1.1 Score=42.99 Aligned_cols=82 Identities=16% Similarity=0.083 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY----TQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i----~~~C~~~~~al~~A~~~ 184 (402)
..+...++.+++|+++|+.++|||.+++.... +..-..+.+.||++.... ...+ +.++++.+.+|..+
T Consensus 221 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~----~~~~~~~~~~lgl~~~~~-~~~~~~~Gn~~sas~~~~L~~~--- 292 (320)
T cd00830 221 AVRLMPESIEEALEKAGLTPDDIDWFVPHQAN----LRIIEAVAKRLGLPEEKV-VVNLDRYGNTSAASIPLALDEA--- 292 (320)
T ss_pred HHHhhHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHh-hhhHHhhCcHHHHHHHHHHHHH---
Confidence 45667789999999999999999998875432 234466889999975431 1111 33444555555433
Q ss_pred HHcC---CCCeEEEEEe
Q 044410 185 AENN---PGARVLVVCS 198 (402)
Q Consensus 185 i~~g---~~~~vLvv~~ 198 (402)
++.+ +.+++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 4688888774
No 154
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=89.61 E-value=0.79 Score=45.06 Aligned_cols=89 Identities=21% Similarity=0.150 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEE-ecCCCCCCCHHHHHHHHcCCCC--cc---ccceeeccccchHHHHHHHHHHHH
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIFS-AFYGVDMPGADVRLMRLLGLKP--SV---NRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~i~~~LGl~~--~~---~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
=..++.+++|+++|++++|||.|+.. +.+++.....+.-+..-+|-.. .+ .....-+.+.+++...+..+...+
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~ 314 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAAS 314 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHH
Confidence 34688999999999999999987643 2222221222233334444211 10 002223445555656666666667
Q ss_pred HcC--CCCeEEEEEecc
Q 044410 186 ENN--PGARVLVVCSDI 200 (402)
Q Consensus 186 ~~g--~~~~vLvv~~e~ 200 (402)
+.| +..++||.+++-
T Consensus 315 ~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 315 RKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HcCcCCCCcEEEEecCC
Confidence 776 467899887543
No 155
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.48 E-value=1.2 Score=44.18 Aligned_cols=86 Identities=10% Similarity=0.050 Sum_probs=54.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHH-cCCCCcccc---ce--eeccccchHHHHHHH
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRL-LGLKPSVNR---LM--IYTQGCYMGGTVIRL 180 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~-LGl~~~~~~---~~--~i~~~C~~~~~al~~ 180 (402)
+...+...++.+++|+++|++++|||.+++...... +-..+.++ ||+.....+ .+ --+.+|++.+.+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~----~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANIN----MNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH----HHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 345666778999999999999999999887443221 22234555 565321111 11 135677888888877
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 044410 181 AKDIAENNPGARVLVVCS 198 (402)
Q Consensus 181 A~~~i~~g~~~~vLvv~~ 198 (402)
+...+ .+.+++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 65433 34678887764
No 156
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=89.31 E-value=1.6 Score=42.06 Aligned_cols=77 Identities=17% Similarity=-0.087 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCH-HHHHHHHcCCCC----ccccceeeccccchHHHHHHHHHHHH
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGA-DVRLMRLLGLKP----SVNRLMIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~-a~~i~~~LGl~~----~~~~~~~i~~~C~~~~~al~~A~~~i 185 (402)
+...++++++|+++|+.++|||.++............ ........+..+ ... ...-+.++++++..|..+...+
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~-~~~G~~~aas~~~~l~~~~~~~ 283 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATK-AMTGNLSSAAVVLAVDEAVLML 283 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCC-cccccchhHhHHHHHHHHHHHH
Confidence 4456789999999999999999888765443222222 222233333210 110 1224557777888887777766
Q ss_pred HcC
Q 044410 186 ENN 188 (402)
Q Consensus 186 ~~g 188 (402)
+.+
T Consensus 284 ~~~ 286 (332)
T cd00825 284 EHG 286 (332)
T ss_pred hcC
Confidence 655
No 157
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=88.88 E-value=1.8 Score=42.98 Aligned_cols=83 Identities=11% Similarity=0.032 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--eccccchHHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LMI--YTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~~--i~~~C~~~~~al~~A~~~i 185 (402)
......++++++|+++|++++|||.++..... ..+-..++++||++..... .+. -+.++++.+.+|..+ +
T Consensus 278 ~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~---~ 350 (379)
T PLN02326 278 AVRCVPQVIESALQKAGLTAESIDWLLLHQAN----QRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA---V 350 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---H
Confidence 44556678999999999999999988874432 2233568999999864311 111 234555666666544 3
Q ss_pred HcC---CCCeEEEEEe
Q 044410 186 ENN---PGARVLVVCS 198 (402)
Q Consensus 186 ~~g---~~~~vLvv~~ 198 (402)
+.+ +.+++|+++.
T Consensus 351 ~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 351 RSGKVKKGDVIATAGF 366 (379)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 443 4678887763
No 158
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=88.76 E-value=1.7 Score=41.80 Aligned_cols=82 Identities=13% Similarity=0.011 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~~ 184 (402)
......++.+++|+++|++++|||.++.... .+..-..+.+.||++.... ... -+.+|++.+..|. .+
T Consensus 217 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~-~~~~~~~Gn~~~a~~~~~L~---~~ 288 (319)
T PRK09352 217 AVRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKV-VVTVDKYGNTSAASIPLALD---EA 288 (319)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHh-hhhHHhhCCHHHHHHHHHHH---HH
Confidence 3445677899999999999999999987442 2334467889999986532 111 1334455555553 34
Q ss_pred HHcC---CCCeEEEEEe
Q 044410 185 AENN---PGARVLVVCS 198 (402)
Q Consensus 185 i~~g---~~~~vLvv~~ 198 (402)
++.| +.+++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 4678887774
No 159
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=88.24 E-value=2.2 Score=39.39 Aligned_cols=87 Identities=15% Similarity=-0.024 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHH-HHHHHHcCCC----CccccceeeccccchHHHHHHHHHHH
Q 044410 110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGAD-VRLMRLLGLK----PSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a-~~i~~~LGl~----~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
.....++++++|+++|+.++|||.++............. .......+.. .... ...-+..+++++..|..+...
T Consensus 144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~as~~~~l~~~~~~ 222 (254)
T cd00327 144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATL-IMTGHPLGAAGLAILDELLLM 222 (254)
T ss_pred hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccc-cccccchHHHHHHHHHHHHHH
Confidence 455678899999999999999998876544332111111 1111222221 1110 122455677777777777666
Q ss_pred HHcC-------CCCeEEEEE
Q 044410 185 AENN-------PGARVLVVC 197 (402)
Q Consensus 185 i~~g-------~~~~vLvv~ 197 (402)
++.+ +.+++|+.+
T Consensus 223 ~~~~~~~~~~~~~~~~l~~~ 242 (254)
T cd00327 223 LEHEFIPPTPREPRTVLLLG 242 (254)
T ss_pred HhCCCcCCCCCCcCEEEEee
Confidence 6654 456666554
No 160
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=87.82 E-value=1.3 Score=44.57 Aligned_cols=73 Identities=15% Similarity=0.079 Sum_probs=49.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec---------cccchHHHHHHHHHHH
Q 044410 114 KEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT---------QGCYMGGTVIRLAKDI 184 (402)
Q Consensus 114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~---------~~C~~~~~al~~A~~~ 184 (402)
..|++++|+++|++++|||.+.+... .........+.||++... . .++ .|++|....+.+..++
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~~~--v-N~~GG~ia~GHp~GaTGa~~v~~ll~qL 390 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDRDK--V-NVNGGAIALGHPIGATGSILIGTVLDEL 390 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCChhh--c-cccCCHHhcCCchhHHHHHHHHHHHHHH
Confidence 47999999999999999998875432 223344667788886543 2 222 2566666667777777
Q ss_pred HHcCCCCeEE
Q 044410 185 AENNPGARVL 194 (402)
Q Consensus 185 i~~g~~~~vL 194 (402)
.+.+ .++.|
T Consensus 391 ~~~g-~~~Gl 399 (417)
T PRK06025 391 ERRG-LKRGL 399 (417)
T ss_pred HHhC-CCeEE
Confidence 6665 45553
No 161
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=87.78 E-value=2.4 Score=40.26 Aligned_cols=85 Identities=12% Similarity=0.219 Sum_probs=58.9
Q ss_pred HHHhHHHHHHHhhccCCCCCCcce-EEEEc----CCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 283 IGNYVDKCLSNAMSPIGISDWNSL-FYVVH----PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 283 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~H----~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
+...+..+++++|+++|+++ +|| .+|.+ .+...+-..+.+++|+..+-... +.+=+|.+.-+++++.+
T Consensus 83 ae~v~f~av~~LL~ktgv~p-~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~------nLsGMGCsAgliai~lA 155 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKP-SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSY------NLSGMGCSAGLIAIDLA 155 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeee------cccCCcchhhHHHHHHH
Confidence 34456688999999999998 998 66554 34567888999999998765433 35666666666666654
Q ss_pred HHhhhhhhcccCCCCCceEEEEEE
Q 044410 358 RKKSIEEMKATTGEGLECGVLFGF 381 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~~ 381 (402)
.+- =+..|+ .++|+++.
T Consensus 156 ~~l----L~~~p~---~~ALVVst 172 (290)
T PF08392_consen 156 KDL----LQAHPN---SYALVVST 172 (290)
T ss_pred HHH----HHhCCC---cEEEEEEE
Confidence 432 114566 78787774
No 162
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=86.45 E-value=1.8 Score=42.01 Aligned_cols=85 Identities=12% Similarity=0.076 Sum_probs=55.5
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee----ccccchHHHHHHH
Q 044410 105 LIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY----TQGCYMGGTVIRL 180 (402)
Q Consensus 105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i----~~~C~~~~~al~~ 180 (402)
..+.+..+..++.+++|++++++++|||.++... .....-..++++||++.... ...+ +.+-++-..+|..
T Consensus 217 vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~-~~~~~~yGNtsaAsiplaL~~ 291 (323)
T COG0332 217 VFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKV-VVTVDKYGNTSAASIPLALDE 291 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHH-hhHHHHhcccccchHHHHHHH
Confidence 3456888999999999999999999999887633 22334467889999976532 2222 2233444445544
Q ss_pred HHHHHHcC---CCCeEEEEE
Q 044410 181 AKDIAENN---PGARVLVVC 197 (402)
Q Consensus 181 A~~~i~~g---~~~~vLvv~ 197 (402)
+ ++.| +.+.+|+++
T Consensus 292 ~---~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 292 A---LREGRIKPGDLVLLEA 308 (323)
T ss_pred H---hhhCCCCCCCEEEEEe
Confidence 4 3334 346677655
No 163
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=86.08 E-value=1.9 Score=39.52 Aligned_cols=88 Identities=16% Similarity=0.191 Sum_probs=54.2
Q ss_pred HHHHHhHHHHHHHhhccCCCCCCcce-EEEEcC----CCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHH
Q 044410 281 VAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHP----GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILD 355 (402)
Q Consensus 281 ~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~----~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~ 355 (402)
+.+.+...++++++|++.|+++ +|| ++|.-. ....+--.+.++||++++--.. -.+.+|++.-...|.
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~~-~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~------~i~~~GC~gg~~~L~ 170 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLDP-SDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRT------PIFGMGCAGGAAGLR 170 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-G-GGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEE------EEES-GGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCC-cccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEE------EEeccchhhHHHHHH
Confidence 3456666678889999999997 999 776532 2355666899999998753222 245666666666665
Q ss_pred HHHHhhhhhhcccCCCCCceEEEEEEc
Q 044410 356 EVRKKSIEEMKATTGEGLECGVLFGFG 382 (402)
Q Consensus 356 ~~~~~~~~~g~i~~G~~~d~vll~~~G 382 (402)
.+.+- -+-.|| .+||+++.=
T Consensus 171 ~A~~~----~~~~p~---a~VLvv~vE 190 (226)
T PF00195_consen 171 RAKDI----ARANPG---ARVLVVCVE 190 (226)
T ss_dssp HHHHH----HHHSTT----EEEEEEEE
T ss_pred HHHHH----HhCCcc---ceEEEEEEE
Confidence 54442 113467 899988764
No 164
>PRK04262 hypothetical protein; Provisional
Probab=85.87 E-value=2.2 Score=41.82 Aligned_cols=81 Identities=21% Similarity=0.183 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-----eeeccccchHHHHHHHHHHHH
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL-----MIYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~-----~~i~~~C~~~~~al~~A~~~i 185 (402)
....++.+++|+++|++++|||.+++.... +.+-..++++||++...... -.-+.++++-+.+|..+..-
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~- 283 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQPN----GKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV- 283 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCCc----hHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh-
Confidence 456778999999999999999998875322 23446788899998653210 11244666666666555432
Q ss_pred HcCCCCeEEEEE
Q 044410 186 ENNPGARVLVVC 197 (402)
Q Consensus 186 ~~g~~~~vLvv~ 197 (402)
..+.+++|+++
T Consensus 284 -~~~Gd~vll~~ 294 (347)
T PRK04262 284 -AKPGDRILVVS 294 (347)
T ss_pred -CCCCCEEEEEe
Confidence 23456666554
No 165
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=82.60 E-value=0.8 Score=37.43 Aligned_cols=77 Identities=14% Similarity=0.027 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEec-CCCCCCCHHHHHHHHcCCCC---ccc----cceeeccccchHHHHHHHHHH
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIFSAF-YGVDMPGADVRLMRLLGLKP---SVN----RLMIYTQGCYMGGTVIRLAKD 183 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~i~~~LGl~~---~~~----~~~~i~~~C~~~~~al~~A~~ 183 (402)
-..++++++|+++|++++|||.|....+ ++..-+.-+.-+.+-++-.. .+. ....-...+++++..|..+..
T Consensus 26 ~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l 105 (119)
T PF02801_consen 26 ALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL 105 (119)
T ss_dssp HHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence 3467899999999999999998765332 22222222334444444321 010 122234566777777777777
Q ss_pred HHHcC
Q 044410 184 IAENN 188 (402)
Q Consensus 184 ~i~~g 188 (402)
.++.+
T Consensus 106 ~l~~~ 110 (119)
T PF02801_consen 106 ALEHG 110 (119)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 77655
No 166
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=82.43 E-value=4.2 Score=40.00 Aligned_cols=87 Identities=16% Similarity=0.015 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHHHHc--CCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-----c-eeeccccchHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEW--GQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-----L-MIYTQGCYMGGTVIR 179 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~a--g~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-----~-~~i~~~C~~~~~al~ 179 (402)
.......++++++|+++ |++++|||.+++..... ..-..++++||++..... . -.-+.++++.+.+|.
T Consensus 256 ~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~----~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 256 LVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGR----AVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHHHHhccccCCCccccceEEEECCCCh----HHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 35566777899999999 99999999888754322 233568899999865310 1 113556677777776
Q ss_pred HHHHHHHcCCCCeEEEEEe
Q 044410 180 LAKDIAENNPGARVLVVCS 198 (402)
Q Consensus 180 ~A~~~i~~g~~~~vLvv~~ 198 (402)
.+..--+-.+.+++|+++.
T Consensus 332 ~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 332 YMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHhCCCCCCCEEEEEEE
Confidence 5543211124678888774
No 167
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=80.70 E-value=5.9 Score=32.71 Aligned_cols=74 Identities=22% Similarity=0.266 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeecc---------ccchHHHHHHHHHHH
Q 044410 114 KEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQ---------GCYMGGTVIRLAKDI 184 (402)
Q Consensus 114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~---------~C~~~~~al~~A~~~ 184 (402)
..|++++|+++|++++|||.+=+.- .+....-...+.||++... .+.+. ||+|....++++.++
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~~~---vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDPEK---VNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGGGG---BSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccccc---cCcccccccccccccccccchhhhhHHHH
Confidence 5799999999999999999875532 1223345567788987643 23322 556666666666666
Q ss_pred HHcCCCCeEEE
Q 044410 185 AENNPGARVLV 195 (402)
Q Consensus 185 i~~g~~~~vLv 195 (402)
-..+ .++.++
T Consensus 98 ~~~~-~~~gla 107 (123)
T PF02803_consen 98 RRRG-GRYGLA 107 (123)
T ss_dssp HHHT-TSEEEE
T ss_pred HHhc-hhhhhH
Confidence 5544 455543
No 168
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=80.51 E-value=5.8 Score=41.01 Aligned_cols=81 Identities=25% Similarity=0.231 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccc--------cchHHHHHHHHHHH
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQG--------CYMGGTVIRLAKDI 184 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~--------C~~~~~al~~A~~~ 184 (402)
...|+++|++++|++++|||.+=+-+|. |.......+.||+...-.+-..++.| .+++++.+.-+...
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydcF----~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSCF----PSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccCC----HHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHH
Confidence 3569999999999999999998766653 33334556889986541001222222 23344555445555
Q ss_pred HHcCCCCeEEEEE
Q 044410 185 AENNPGARVLVVC 197 (402)
Q Consensus 185 i~~g~~~~vLvv~ 197 (402)
|+..+.++.|+.+
T Consensus 370 LRg~~~~~gLv~~ 382 (498)
T PRK08257 370 LRANPGRRGLVTA 382 (498)
T ss_pred HhhcCCCEEEEEC
Confidence 5544566666654
No 169
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=80.14 E-value=5.5 Score=39.39 Aligned_cols=78 Identities=14% Similarity=-0.042 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccce------eeccccchHHHHHHHHHHHH
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLM------IYTQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~------~i~~~C~~~~~al~~A~~~i 185 (402)
-...|++++|+++|++++|||.+..... .........+.||+...+.... -.-.|++|......+..++-
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~ea----fa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~ 334 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINEA----FASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAK 334 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecch----hHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHH
Confidence 4567999999999999999998866332 2233345667889865421011 12336666666666666665
Q ss_pred HcCCCCeEE
Q 044410 186 ENNPGARVL 194 (402)
Q Consensus 186 ~~g~~~~vL 194 (402)
+.| .++.+
T Consensus 335 ~~~-~~~g~ 342 (361)
T PRK06690 335 RED-MKYGI 342 (361)
T ss_pred HhC-CCEEE
Confidence 543 44544
No 170
>PRK12404 stage V sporulation protein AD; Provisional
Probab=78.50 E-value=17 Score=35.22 Aligned_cols=73 Identities=14% Similarity=0.178 Sum_probs=48.0
Q ss_pred CCchhHHH-HHhHHHHHHHhhccCCCCCCcce-EEEEcCC-CHHHH-HHHHHHcCCCccccHHHHHHHHhcCCCCcchHH
Q 044410 276 SRDVPVAI-GNYVDKCLSNAMSPIGISDWNSL-FYVVHPG-GDGLL-DQVEKTLGLRKEKLWASRYVLREYGNMGAPSVF 351 (402)
Q Consensus 276 ~~~v~~~~-~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~-~~~~~-~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~ 351 (402)
+++.++.+ ...+.++++.+|+++|+++ +|| +++.... |..+. ..+++.||+|. +.-||-|++..--
T Consensus 46 g~~swEkAE~~L~~EA~~~AL~kAGI~~-~DID~i~vGdL~nQ~ipssfvar~LGIP~---------~gV~gACSTg~eA 115 (334)
T PRK12404 46 GQDSYEKAERKLLEEACSRAIEKAKLRK-EDIQFFLAGDLMNQITPTSFAARTLGIPY---------LGLFGACSTSMEG 115 (334)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEecCCCcCcHHHHHHHhCCCc---------cceeecCHHHHHH
Confidence 55555443 3456688999999999997 999 6665432 22222 26778899763 4457777777766
Q ss_pred HHHHHHH
Q 044410 352 FILDEVR 358 (402)
Q Consensus 352 i~L~~~~ 358 (402)
+.++..+
T Consensus 116 L~lAa~~ 122 (334)
T PRK12404 116 LALAALI 122 (334)
T ss_pred HHHHHHH
Confidence 6666443
No 171
>PLN03173 chalcone synthase; Provisional
Probab=77.25 E-value=10 Score=37.90 Aligned_cols=86 Identities=16% Similarity=0.107 Sum_probs=54.7
Q ss_pred HHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCC----CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHH
Q 044410 281 VAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPG----GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILD 355 (402)
Q Consensus 281 ~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~----~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~ 355 (402)
+.+.+...++++++|+++|+++ +|| +++.... ...+--.++++||++..-... -..+++++.-..+|.
T Consensus 100 ~~a~~La~~Aa~~AL~~ag~~~-~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~------~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 100 VEVPKLGKEAAAKAIKEWGQPK-SKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRF------MMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEccCCCcccHHHHHHHHHhCCCccceee------ehhcCccHHHHHHHH
Confidence 3445556678899999999997 999 7655431 244455689999998652111 134667777777777
Q ss_pred HHHHhhhhhhcccCCCCCceEEEEE
Q 044410 356 EVRKKSIEEMKATTGEGLECGVLFG 380 (402)
Q Consensus 356 ~~~~~~~~~g~i~~G~~~d~vll~~ 380 (402)
.+.+- . +-.++ .+||+++
T Consensus 173 ~A~~~-~---~~~~~---~~vLVV~ 190 (391)
T PLN03173 173 LAKDL-A---ENNKG---ARVLVVC 190 (391)
T ss_pred HHHHH-H---HhCCC---CeEEEEE
Confidence 66542 1 01234 6777765
No 172
>PLN03170 chalcone synthase; Provisional
Probab=76.94 E-value=12 Score=37.50 Aligned_cols=85 Identities=16% Similarity=0.107 Sum_probs=54.2
Q ss_pred HHHHhHHHHHHHhhccCCCCCCcce-EEEE-cCC---CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410 282 AIGNYVDKCLSNAMSPIGISDWNSL-FYVV-HPG---GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE 356 (402)
Q Consensus 282 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i~-H~~---~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~ 356 (402)
.+.+...++.+++|+++|+++ +|| ++|. ... ....--.+.++||+++.-... -..|++++.-+.+|..
T Consensus 105 ~a~~La~~Aa~~AL~~ag~~~-~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~------~d~~~gC~G~~~aL~~ 177 (401)
T PLN03170 105 EVPKLGKAAAQKAIKEWGQPK-SKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRL------MMYQQGCFAGGTVLRV 177 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHH------HhhcChhHHHHHHHHH
Confidence 445556678899999999997 999 7643 322 334555789999998652111 2356777777778776
Q ss_pred HHHhhhhhhcccCCCCCceEEEEE
Q 044410 357 VRKKSIEEMKATTGEGLECGVLFG 380 (402)
Q Consensus 357 ~~~~~~~~g~i~~G~~~d~vll~~ 380 (402)
+.+- .. -.++ .+||+++
T Consensus 178 A~~l-~~---~~~~---~~vLVV~ 194 (401)
T PLN03170 178 AKDL-AE---NNRG---ARVLVVC 194 (401)
T ss_pred HHHH-HH---cCCC---CeEEEEE
Confidence 6542 10 1233 6788774
No 173
>PLN03172 chalcone synthase family protein; Provisional
Probab=76.93 E-value=9.4 Score=38.20 Aligned_cols=87 Identities=15% Similarity=0.092 Sum_probs=55.8
Q ss_pred HHHHHhHHHHHHHhhccCCCCCCcce-EEEEcC----CCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHH
Q 044410 281 VAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHP----GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILD 355 (402)
Q Consensus 281 ~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~----~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~ 355 (402)
+.+.+...++++++|+++|+++ +|| +++... ....+--.+.++||++..-... -..|+++++-..+|.
T Consensus 100 ~~a~~La~~Aa~~aL~~ag~~~-~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~------~~~~~gC~g~~~aL~ 172 (393)
T PLN03172 100 VEVPKLGKEAAAKAIKEWGQPK-SKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRF------MMYQQGCFAGGTVLR 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEE------eeeCCchHHHHHHHH
Confidence 3455566678899999999997 999 765432 2334556689999998652111 245678888888887
Q ss_pred HHHHhhhhhhcccCCCCCceEEEEEE
Q 044410 356 EVRKKSIEEMKATTGEGLECGVLFGF 381 (402)
Q Consensus 356 ~~~~~~~~~g~i~~G~~~d~vll~~~ 381 (402)
.+.+- . +-.++ .+||+++.
T Consensus 173 ~A~~~-~---~~~~~---~~vLVV~~ 191 (393)
T PLN03172 173 LAKDL-A---ENNAG---SRVLVVCS 191 (393)
T ss_pred HHHHH-H---HcCCC---CeEEEEEE
Confidence 66543 1 01233 67777654
No 174
>PLN03168 chalcone synthase; Provisional
Probab=76.68 E-value=10 Score=37.83 Aligned_cols=86 Identities=14% Similarity=0.095 Sum_probs=55.9
Q ss_pred HHHHhHHHHHHHhhccCCCCCCcce-EEEEcCC----CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410 282 AIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPG----GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE 356 (402)
Q Consensus 282 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~----~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~ 356 (402)
.+.+.-.++.+++|+++|+++ +|| ++|+... ....--.+.++||++..-... -..|++++.-..+|..
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~-~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~------~d~~~gC~g~~~aL~~ 172 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRK-SDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRV------MMYQTGCFGGASVLRV 172 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceee------eeeCCccHHHHHHHHH
Confidence 455555678899999999997 999 7766533 234455788999997642111 2356777887888876
Q ss_pred HHHhhhhhhcccCCCCCceEEEEEE
Q 044410 357 VRKKSIEEMKATTGEGLECGVLFGF 381 (402)
Q Consensus 357 ~~~~~~~~g~i~~G~~~d~vll~~~ 381 (402)
+.+- +. -.++ .+||+++.
T Consensus 173 A~~~-i~---~~~~---~~VLVV~~ 190 (389)
T PLN03168 173 AKDL-AE---NNKG---ARVLAVAS 190 (389)
T ss_pred HHHH-HH---hCCC---CEEEEEEE
Confidence 6542 10 1233 67777664
No 175
>PLN02377 3-ketoacyl-CoA synthase
Probab=76.53 E-value=8.2 Score=39.86 Aligned_cols=70 Identities=16% Similarity=0.183 Sum_probs=47.1
Q ss_pred HHHHhHHHHHHHhhccCCCCCCcce-EEEEcC----CCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410 282 AIGNYVDKCLSNAMSPIGISDWNSL-FYVVHP----GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE 356 (402)
Q Consensus 282 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~----~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~ 356 (402)
.+...+..+++++|+++|+++ +|| +++... ....+--.+.++||+.++-... +.+-+|++.-+++|+.
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p-~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~af------dL~gmGCsggl~aL~l 243 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNP-KDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF------NLGGMGCSAGVIAVDL 243 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEE------ecccchhhHHHHHHHH
Confidence 345566678899999999998 999 776632 2345677889999997543222 2444556666666665
Q ss_pred HH
Q 044410 357 VR 358 (402)
Q Consensus 357 ~~ 358 (402)
+.
T Consensus 244 A~ 245 (502)
T PLN02377 244 AK 245 (502)
T ss_pred HH
Confidence 43
No 176
>PLN02192 3-ketoacyl-CoA synthase
Probab=76.46 E-value=9 Score=39.59 Aligned_cols=85 Identities=12% Similarity=0.196 Sum_probs=55.1
Q ss_pred HHHHhHHHHHHHhhccCCCCCCcce-EEEEcC----CCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410 282 AIGNYVDKCLSNAMSPIGISDWNSL-FYVVHP----GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE 356 (402)
Q Consensus 282 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~----~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~ 356 (402)
.+...+..+++++|+++|+++ +|| .+|... ....+-..+.++||+..+-..+ +.+-+|++.-+++|+.
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p-~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~af------dLsgmGCSggl~aLdl 247 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKP-KDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSY------NLGGMGCSAGLISIDL 247 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEE------EcccchhhhHHHHHHH
Confidence 345566678899999999998 998 766543 3355667789999997432222 3565677777777765
Q ss_pred HHHhhhhhhcccCCCCCceEEEEE
Q 044410 357 VRKKSIEEMKATTGEGLECGVLFG 380 (402)
Q Consensus 357 ~~~~~~~~g~i~~G~~~d~vll~~ 380 (402)
+.+- + +..++ .++|+++
T Consensus 248 A~~l-L---~a~~~---~~aLVVs 264 (511)
T PLN02192 248 AKHL-L---QVHPN---SYALVIS 264 (511)
T ss_pred HHHH-H---HcCCC---CeEEEEE
Confidence 5432 1 02234 6777666
No 177
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=76.42 E-value=8.2 Score=37.03 Aligned_cols=87 Identities=17% Similarity=0.065 Sum_probs=56.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-----ee--eccccchHHHHHH
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL-----MI--YTQGCYMGGTVIR 179 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~-----~~--i~~~C~~~~~al~ 179 (402)
+.......++++++|++.|++ +|||.++...... +..-..+.++|+++...... +. -+.+|++.+.+|.
T Consensus 219 ~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~ 294 (324)
T cd00827 219 EAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLA 294 (324)
T ss_pred HHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHH
Confidence 356777888999999999999 9999877644322 14567888999985221100 11 2446666666665
Q ss_pred HHHHHHHcC---CCCeEEEEEecc
Q 044410 180 LAKDIAENN---PGARVLVVCSDI 200 (402)
Q Consensus 180 ~A~~~i~~g---~~~~vLvv~~e~ 200 (402)
.+ ++.+ +.+++|+++.-.
T Consensus 295 ~~---~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 295 SL---LESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HH---HhcCCCCCCCEEEEEEecc
Confidence 44 3333 467888887543
No 178
>PLN02932 3-ketoacyl-CoA synthase
Probab=76.27 E-value=8.8 Score=39.38 Aligned_cols=70 Identities=19% Similarity=0.270 Sum_probs=48.6
Q ss_pred HHHhHHHHHHHhhccCCCCCCcce-EEEEcC----CCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 283 IGNYVDKCLSNAMSPIGISDWNSL-FYVVHP----GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 283 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~----~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
+.....++++++|+++|+++ +|| ++|... ....+--.+.++||++.+-... +.+-+|++.-+++|+.+
T Consensus 148 a~~la~~Aa~~aL~~agi~p-~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~f------dL~gmGCSggl~aL~lA 220 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISP-SDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSL------NLGGMGCSAGVIAIDAA 220 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEE------EeccchhhhHHHHHHHH
Confidence 44556678899999999998 998 665432 2345667789999997543222 35667777777777765
Q ss_pred HH
Q 044410 358 RK 359 (402)
Q Consensus 358 ~~ 359 (402)
.+
T Consensus 221 ~~ 222 (478)
T PLN02932 221 KS 222 (478)
T ss_pred HH
Confidence 44
No 179
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=76.17 E-value=11 Score=37.11 Aligned_cols=81 Identities=6% Similarity=-0.080 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccce--e-e-ccccchHHHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLM--I-Y-TQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~--~-i-~~~C~~~~~al~~A~~~ 184 (402)
.......+++++|+++|++++|||.+++...+ ...-..+.++||++....... . . +.+.++...+|. ..
T Consensus 240 ~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~----~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~---~~ 312 (353)
T PRK12880 240 ALECEPKSFKEILEFSKVDEKDIAFHLFHQSN----AYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLC---EL 312 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHH---HH
Confidence 45566778999999999999999999875432 234467899999987532111 1 1 334455555554 33
Q ss_pred HHcCCCCeEEEEE
Q 044410 185 AENNPGARVLVVC 197 (402)
Q Consensus 185 i~~g~~~~vLvv~ 197 (402)
+..+..+ +|+++
T Consensus 313 ~~~~~~~-~ll~~ 324 (353)
T PRK12880 313 DTPKEFK-ASLSA 324 (353)
T ss_pred HHcCCcE-EEEEE
Confidence 4555544 44444
No 180
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=74.72 E-value=4.6 Score=40.44 Aligned_cols=76 Identities=12% Similarity=-0.018 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcCCCCcccc-----ceeeccccchHHHHHHHHHHHHH
Q 044410 113 GKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLGLKPSVNR-----LMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LGl~~~~~~-----~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
...|+++||+++|++++|||++- +++.++...+.-..-+...+|......+ ...-+..+++++..+..+...++
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~ 357 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIR 357 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHh
Confidence 45789999999999999999874 4444443333333445555553211100 11123344555555555555666
Q ss_pred cC
Q 044410 187 NN 188 (402)
Q Consensus 187 ~g 188 (402)
.+
T Consensus 358 ~~ 359 (411)
T PRK07314 358 DQ 359 (411)
T ss_pred CC
Confidence 55
No 181
>PLN00415 3-ketoacyl-CoA synthase
Probab=74.39 E-value=12 Score=38.26 Aligned_cols=81 Identities=15% Similarity=0.205 Sum_probs=51.7
Q ss_pred hHHHHHHHhhccCCCCCCcce-EEEEcCCC----HHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410 286 YVDKCLSNAMSPIGISDWNSL-FYVVHPGG----DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 286 ~~~~~i~~~L~~~gl~~~~di-~~i~H~~~----~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
.+..+++++|+++|+++ +|| ++|..... ...--.+.+++|++++-... ..+.+|++.-+++|..+.+-
T Consensus 137 ~i~~A~~~aL~~aGi~p-~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~------dL~gmGCsggv~aL~lA~~l 209 (466)
T PLN00415 137 VIFGALNSLFKKTGIEP-REVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTY------NLSGMGCSAGAISVDLATNL 209 (466)
T ss_pred HHHHHHHHHHHHcCCCH-HHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEE------EeccccchHHHHHHHHHHHH
Confidence 34567789999999997 998 77665432 33455688999998443222 35666667777777655442
Q ss_pred hhhhhcccCCCCCceEEEEE
Q 044410 361 SIEEMKATTGEGLECGVLFG 380 (402)
Q Consensus 361 ~~~~g~i~~G~~~d~vll~~ 380 (402)
=+..++ .++|+++
T Consensus 210 ----l~a~~~---~~aLVVs 222 (466)
T PLN00415 210 ----LKANPN---TYAVIVS 222 (466)
T ss_pred ----HHhCCC---CEEEEEE
Confidence 012344 6777665
No 182
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=74.25 E-value=6.1 Score=41.27 Aligned_cols=75 Identities=15% Similarity=0.024 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcCCCCc-----cccceeeccccchHHHHHHHHHHHHH
Q 044410 113 GKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLGLKPS-----VNRLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LGl~~~-----~~~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
..++.++||+++|++++|||+|- ++|.|+..-+.-..-|.+-+|-... +. ...-+.-++++...+..+...|+
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~K-s~iGH~~gAAGa~eli~~~lal~ 485 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTK-SMIGHLLGAAGAVEAIATVQAIR 485 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCC-CCcCCCcccchHHHHHHHHHHHh
Confidence 45789999999999999999873 4455552223333455566653211 11 22233344444445545555566
Q ss_pred cC
Q 044410 187 NN 188 (402)
Q Consensus 187 ~g 188 (402)
.|
T Consensus 486 ~g 487 (540)
T PLN02787 486 TG 487 (540)
T ss_pred cC
Confidence 55
No 183
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=74.13 E-value=7.3 Score=39.06 Aligned_cols=45 Identities=24% Similarity=0.322 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS 160 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~ 160 (402)
-...|+++||+++|++++|||.+-+.- .+........+.||+...
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~~ 342 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDPS 342 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCCc
Confidence 346899999999999999999885321 122333445678887643
No 184
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=73.90 E-value=9.9 Score=38.11 Aligned_cols=76 Identities=11% Similarity=-0.151 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEE-EecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIF-SAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g 188 (402)
-..++.++||+++|+ ++|||+|.. +|.|+..-..-..-|.+.++.+-.......-+.-++++...+..+...|+.|
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhcC
Confidence 346799999999999 899998653 3334422233345556666643211112223333444444444445555555
No 185
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=72.92 E-value=28 Score=33.71 Aligned_cols=45 Identities=11% Similarity=0.251 Sum_probs=29.5
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEEcC-CCHH-HHHHHHHHcCCCc
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVVHP-GGDG-LLDQVEKTLGLRK 329 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~H~-~~~~-~~~~~~~~lgi~~ 329 (402)
.+...++++++|+++|+++ +|| .++... .+.. .-..+++.||+|.
T Consensus 51 ~eLa~eAa~~ALekAGL~~-~DID~IIvGdl~~Q~~~As~vA~~LGIP~ 98 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKK-DDVDFFLAGDLLNQIITANFVARDLGIPF 98 (327)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEeCCCCcccHHHHHHHHhCCCE
Confidence 3455678899999999997 998 654422 2222 2234678888743
No 186
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=72.39 E-value=12 Score=37.71 Aligned_cols=73 Identities=15% Similarity=0.169 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeecc---------ccchHHHHHHHHHHH
Q 044410 114 KEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQ---------GCYMGGTVIRLAKDI 184 (402)
Q Consensus 114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~---------~C~~~~~al~~A~~~ 184 (402)
..|+++||+++|++++|||.+=+.- .+....-...+.||+...+ ..++. |++|....+.++.++
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~d----aFa~~~l~~~e~lG~~~~~---vN~~GG~la~GHP~GAsG~~~~~~l~~~L 375 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELNE----AFASVVLRFMQALDIPHDK---VNVNGGAIAMGHPLGATGAMILGTVLDEL 375 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----hhhHHHHHHHHHhCCCCcC---CCcCCCHHhcCCcHHHHHHHHHHHHHHHH
Confidence 4699999999999999999886422 2233334567888986542 22222 344444445555555
Q ss_pred HHcCCCCeEE
Q 044410 185 AENNPGARVL 194 (402)
Q Consensus 185 i~~g~~~~vL 194 (402)
-+.+ .++.|
T Consensus 376 ~~~~-~~~g~ 384 (402)
T PRK08242 376 ERRG-KRTAL 384 (402)
T ss_pred HhcC-CCeEE
Confidence 4433 45554
No 187
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=71.80 E-value=8.1 Score=38.88 Aligned_cols=45 Identities=13% Similarity=0.115 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcC
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLG 156 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LG 156 (402)
=+.+|.+.||+++|++++|||.|- ++|+|+..-..-+.-|...+|
T Consensus 277 Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 277 GAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred hHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 356899999999999999999885 445555333334455555556
No 188
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.63 E-value=7.5 Score=39.23 Aligned_cols=46 Identities=20% Similarity=0.096 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcCC
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLGL 157 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LGl 157 (402)
-..+++++||+++|++++|||.|- +++.++..-+.-..-|..-+|-
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 357899999999999999999873 4444443334445566677774
No 189
>PLN02854 3-ketoacyl-CoA synthase
Probab=71.20 E-value=13 Score=38.67 Aligned_cols=70 Identities=16% Similarity=0.216 Sum_probs=47.0
Q ss_pred HHHhHHHHHHHhhccCCCCCCcce-EEEEcCC----CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 283 IGNYVDKCLSNAMSPIGISDWNSL-FYVVHPG----GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 283 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~----~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
+...+-.+++++|+++|+++ +|| .+|.... ....--.+.++||+..+-... +.+-++++.-+++|+.+
T Consensus 188 a~~v~~~~~~~lL~kaGi~p-~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~af------dLsgmGCSggl~aL~lA 260 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKP-RDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSY------NLGGMGCSAGLISIDLA 260 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEE------ecccchhhhHHHHHHHH
Confidence 34455577889999999998 999 7766432 244566789999997543222 35556667777777655
Q ss_pred HH
Q 044410 358 RK 359 (402)
Q Consensus 358 ~~ 359 (402)
.+
T Consensus 261 ~~ 262 (521)
T PLN02854 261 ND 262 (521)
T ss_pred HH
Confidence 43
No 190
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.00 E-value=7.5 Score=39.15 Aligned_cols=45 Identities=18% Similarity=0.069 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEE-EEEecCCCCCCCHHHHHHHHcC
Q 044410 112 LGKEAALKAIKEWGQPVSKITHL-IFSAFYGVDMPGADVRLMRLLG 156 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~l-i~~s~~~~~~p~~a~~i~~~LG 156 (402)
-...|.++||+++|++++|||.| .+++.++..-+.-+.-|.+.+|
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 35778999999999999999987 4445444333333455566665
No 191
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=70.98 E-value=6.4 Score=39.23 Aligned_cols=78 Identities=9% Similarity=-0.028 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcCCCCcc--ccceeeccccchHHHHHHHHHHHHHc
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLGLKPSV--NRLMIYTQGCYMGGTVIRLAKDIAEN 187 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LGl~~~~--~~~~~i~~~C~~~~~al~~A~~~i~~ 187 (402)
....+|+++||+++|++++|||.|- +++.++..-+.-..-|.+-+|-.... .....-+...++++..+..+...|+.
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~ 333 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFPHRVAVSSTKGATGHTLGASGALGVAFSLLALRH 333 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcCCCCeeecchhhhccChHHHHHHHHHHHHHHHhc
Confidence 4567899999999999999999875 34444432232234455555521100 00122233445555555555555655
Q ss_pred C
Q 044410 188 N 188 (402)
Q Consensus 188 g 188 (402)
+
T Consensus 334 ~ 334 (381)
T PRK05952 334 Q 334 (381)
T ss_pred C
Confidence 4
No 192
>PRK09051 beta-ketothiolase; Provisional
Probab=70.78 E-value=11 Score=37.68 Aligned_cols=44 Identities=23% Similarity=0.316 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS 160 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~ 160 (402)
...|++++|+++|++++|||++=+.. .++.......+.||+...
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~~ 337 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDPA 337 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCcc
Confidence 46799999999999999999875522 123334456688998653
No 193
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=70.22 E-value=19 Score=35.98 Aligned_cols=78 Identities=18% Similarity=0.128 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc------ceeeccccchHHHHHHHHHHHHH
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR------LMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~------~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
...|+++||+++|++++|||.+=+..+ ++...-...+.||+...+.. ++-.-.||+|...-+.++.++-.
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d~----f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~ 369 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINEA----FAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI 369 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeccc----chHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh
Confidence 457999999999999999998755332 23334555678887643210 11122355666666666666643
Q ss_pred cCCCCeEEE
Q 044410 187 NNPGARVLV 195 (402)
Q Consensus 187 ~g~~~~vLv 195 (402)
.+ .++.|+
T Consensus 370 ~~-~~~gl~ 377 (394)
T PRK06445 370 KG-KDYGVA 377 (394)
T ss_pred cC-CCEEEE
Confidence 22 345543
No 194
>PLN03169 chalcone synthase family protein; Provisional
Probab=70.10 E-value=22 Score=35.57 Aligned_cols=87 Identities=14% Similarity=0.048 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEE-EecCCCCCCCHHHHHHHHcCCCCcccc------ceeeccccchHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIF-SAFYGVDMPGADVRLMRLLGLKPSVNR------LMIYTQGCYMGGTVIRLA 181 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~i~~~LGl~~~~~~------~~~i~~~C~~~~~al~~A 181 (402)
+..-..+.++++|+++|++++|||.+.+ .+. ....+-..++++||++..... .--.++++++-+.+|+.+
T Consensus 279 ~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq---~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 279 IEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHP---GGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcceEEecC---CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 4455566789999999999999983322 121 223455678999999865321 011355777777777655
Q ss_pred HHH--HH-cCCCCeEEEEEe
Q 044410 182 KDI--AE-NNPGARVLVVCS 198 (402)
Q Consensus 182 ~~~--i~-~g~~~~vLvv~~ 198 (402)
..- ++ ..+.+++|+++.
T Consensus 356 ~~~~~~~~~~~gd~~ll~af 375 (391)
T PLN03169 356 REELKKKGEEDEEWGLILAF 375 (391)
T ss_pred HHhhcccCCCCCcEEEEEEE
Confidence 422 21 113577776663
No 195
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=69.98 E-value=3.5 Score=40.09 Aligned_cols=46 Identities=15% Similarity=0.119 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEE-EEEecCCCCCCCHHHHHHHHcC
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHL-IFSAFYGVDMPGADVRLMRLLG 156 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~l-i~~s~~~~~~p~~a~~i~~~LG 156 (402)
.=+..|.++||+++|+.|+|||.| .++|+|+.---.-+.-|.+-++
T Consensus 301 ~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~ 347 (440)
T KOG1394|consen 301 AGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFG 347 (440)
T ss_pred chHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhc
Confidence 346678899999999999999988 4667666211122334444444
No 196
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=69.86 E-value=8.8 Score=37.65 Aligned_cols=48 Identities=19% Similarity=0.121 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcCC
Q 044410 110 PKLGKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLGL 157 (402)
Q Consensus 110 ~~la~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LGl 157 (402)
..-..+|+++||+++|++++|||.|- +++.++..-+.-..-|.+-+|-
T Consensus 205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 34567899999999999999999763 3344443334444556666663
No 197
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=67.83 E-value=14 Score=37.00 Aligned_cols=43 Identities=16% Similarity=0.304 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
...|++++|+++|++++|||++-+.. .++.......+.||+..
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~ 341 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLAD 341 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCC
Confidence 36799999999999999999876322 22333345567889843
No 198
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=67.46 E-value=11 Score=35.09 Aligned_cols=59 Identities=19% Similarity=0.138 Sum_probs=40.6
Q ss_pred HHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcch
Q 044410 289 KCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPS 349 (402)
Q Consensus 289 ~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sas 349 (402)
..|+.+|+.+|++. +|| .+=.+.+-..-.-.+++.|+++.+|...+- -.-..||.-.+|
T Consensus 297 PAI~~vLKksGlkl-~DiDl~EvNEAFApQ~LAv~r~L~ld~sKlNVNG-GAIALGHPLgaS 356 (396)
T KOG1391|consen 297 PAISGVLKKSGLKL-KDIDLVEVNEAFAPQYLAVERSLDLDISKLNVNG-GAIALGHPLGAS 356 (396)
T ss_pred HHHHHHHHHcCCcc-cccceEEechhhchHHHHHHHhhCCChhhccccC-ceeeccCccccC
Confidence 46788999999997 998 665555444445567889999999887641 112457765444
No 199
>PRK05790 putative acyltransferase; Provisional
Probab=67.15 E-value=17 Score=36.20 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
...|+++||+++|++++|||.+-+.-+ +....-...+.||+..
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d~----f~~~~l~~~e~lg~~~ 335 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINEA----FAAQALAVEKELGLDP 335 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCcH----HHHHHHHHHHHhCCCh
Confidence 357999999999999999998854221 2223344567888753
No 200
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=66.90 E-value=15 Score=36.68 Aligned_cols=42 Identities=24% Similarity=0.267 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
...|+++||+++|++++|||.+-+..+ .+.......+.||+.
T Consensus 288 ~~~a~~~a~~~Agi~~~did~~e~~d~----fa~~~~~~~e~lG~~ 329 (386)
T TIGR01930 288 PVPAIPKALKKAGLSISDIDLFEINEA----FAAQVLACIKELGLD 329 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCeeehcch----hHHHHHHHHHHhCCC
Confidence 358999999999999999998844322 122223344778874
No 201
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=66.64 E-value=23 Score=35.30 Aligned_cols=44 Identities=9% Similarity=0.052 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
-...|++++|+++|++++|||.+=+..+ ++...-...+.||+..
T Consensus 286 ~~~~a~~~al~~agl~~~did~~ei~d~----F~~~~l~~~e~lg~~~ 329 (387)
T PRK07850 286 GPVQATAKVLEKAGMKIGDIDLVEINEA----FASVVLSWAQVHEPDM 329 (387)
T ss_pred hHHHHHHHHHHHcCCCHHHcCeeeeccc----chHHHHHHHHHcCCCC
Confidence 3468999999999999999998866433 2222234447888754
No 202
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=66.48 E-value=11 Score=37.58 Aligned_cols=78 Identities=10% Similarity=-0.030 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEE-ecCCCCCCCHHHHHHHHcCCC--Cccc---cceeeccccchHHHHHHHHHHH
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLIFS-AFYGVDMPGADVRLMRLLGLK--PSVN---RLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~i~~~LGl~--~~~~---~~~~i~~~C~~~~~al~~A~~~ 184 (402)
.-..++++++|+++|++++|||.|... +.++..-+.-+.-+...++-. ..+. .....+..+++++..+..+...
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~ 354 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLA 354 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHH
Confidence 445678999999999999999987643 333333333334455555542 1110 0112345677777777777777
Q ss_pred HHcC
Q 044410 185 AENN 188 (402)
Q Consensus 185 i~~g 188 (402)
++.+
T Consensus 355 l~~~ 358 (406)
T cd00834 355 LRDG 358 (406)
T ss_pred HhcC
Confidence 7776
No 203
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=66.43 E-value=30 Score=34.22 Aligned_cols=84 Identities=18% Similarity=0.122 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC-Ccccc---c--eeeccccchHHHHHHHH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK-PSVNR---L--MIYTQGCYMGGTVIRLA 181 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~-~~~~~---~--~~i~~~C~~~~~al~~A 181 (402)
.-..-...|++..+++.|+.++|.|.+++.. ..|-+....+..||.+ ..+.+ . ...+..|++.+.+| |
T Consensus 206 ~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--a 279 (377)
T COG3425 206 AYFKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--A 279 (377)
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--H
Confidence 3456778899999999999999999999855 3345566777777766 21111 1 23345677776665 3
Q ss_pred HHHHHcC-CCCeEEEEE
Q 044410 182 KDIAENN-PGARVLVVC 197 (402)
Q Consensus 182 ~~~i~~g-~~~~vLvv~ 197 (402)
.-|=.+. +.+++|+++
T Consensus 280 s~L~~a~~~G~rIl~~S 296 (377)
T COG3425 280 SLLDNAKLPGDRILLFS 296 (377)
T ss_pred HHHhhcCCCCCEEEEEe
Confidence 3333344 567887765
No 204
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=66.11 E-value=9.2 Score=38.41 Aligned_cols=45 Identities=13% Similarity=-0.011 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcC
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLG 156 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LG 156 (402)
-..++++++|+++|++++|||.|. +++.++..-+.-+.-|.+.+|
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 346899999999999999999884 445555333444556667776
No 205
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=65.94 E-value=11 Score=37.74 Aligned_cols=43 Identities=16% Similarity=0.266 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
...|+++||+++|++++|||.+-+.. .++.......+.||+..
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~D----~f~~~~l~~~e~lG~~~ 340 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELNE----AFAAQALAVLRELGLAD 340 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccCc----HHHHHHHHHHHHcCCCC
Confidence 45799999999999999999876322 22333445667889843
No 206
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.88 E-value=9 Score=38.58 Aligned_cols=46 Identities=22% Similarity=0.316 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcC
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLG 156 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LG 156 (402)
.-..+|+++||+++|++++|||.|- +++.++..-+.-..-+...+|
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 3457899999999999999999874 334444222233445566666
No 207
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=65.71 E-value=13 Score=37.22 Aligned_cols=78 Identities=19% Similarity=0.181 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc--ceee----ccccchHHHHHHHHHHHH
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR--LMIY----TQGCYMGGTVIRLAKDIA 185 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~--~~~i----~~~C~~~~~al~~A~~~i 185 (402)
-...|+++||+++|++++|||.+-+.-. ++...-...+.||+...+.. ...+ -.|++|....+.++.++-
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~d~----f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~ 365 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELNEA----FASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMK 365 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCH----HHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999998864221 22222333468887543210 1111 124445555555555555
Q ss_pred HcCCCCeEE
Q 044410 186 ENNPGARVL 194 (402)
Q Consensus 186 ~~g~~~~vL 194 (402)
+.+ .++.|
T Consensus 366 ~~~-~~~g~ 373 (391)
T PRK07661 366 RRN-EQFGI 373 (391)
T ss_pred hcC-CCeEE
Confidence 443 34544
No 208
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=64.71 E-value=31 Score=34.34 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=47.9
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcCC-----CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPG-----GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVR 358 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~-----~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~ 358 (402)
+...++++++|+++|+++ +|| .++..+. .......+...||++......+ + |.++++-..+|..+.
T Consensus 24 ~La~~A~~~AL~dAgl~~-~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~---v----~~~c~s~~~al~~A~ 95 (386)
T cd00751 24 DLGAAVIKALLERAGLDP-EEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATT---V----NRVCGSGLQAVALAA 95 (386)
T ss_pred HHHHHHHHHHHHhcCCCH-HHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhh---h----ccccHHHHHHHHHHH
Confidence 344578889999999997 888 6655322 1233445788899975332221 2 334555555665554
Q ss_pred HhhhhhhcccCCCCCceEEEEEE
Q 044410 359 KKSIEEMKATTGEGLECGVLFGF 381 (402)
Q Consensus 359 ~~~~~~g~i~~G~~~d~vll~~~ 381 (402)
.. |+.|. .|.||++++
T Consensus 96 ~~------I~sG~-~~~vLv~g~ 111 (386)
T cd00751 96 QS------IAAGE-ADVVVAGGV 111 (386)
T ss_pred HH------HHCCC-CCeEEEeee
Confidence 43 44442 266776553
No 209
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=64.49 E-value=19 Score=36.00 Aligned_cols=42 Identities=10% Similarity=0.192 Sum_probs=30.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 114 KEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
..|++++|+++|++++|||.+-+.. ..+.......+.||+..
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~ 335 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA 335 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC
Confidence 5799999999999999999886522 12233345567888753
No 210
>PLN03171 chalcone synthase-like protein; Provisional
Probab=64.17 E-value=28 Score=34.84 Aligned_cols=71 Identities=18% Similarity=0.118 Sum_probs=46.3
Q ss_pred HHHHhHHHHHHHhhccCCCCCCcce-EEEEcCC----CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410 282 AIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPG----GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE 356 (402)
Q Consensus 282 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~----~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~ 356 (402)
...+...++.+++|+++|+++ +|| ++++... ....--.+.++||++..-... ...++ ++++-+.+|..
T Consensus 107 ~a~~la~~Aa~~aL~~ag~~~-~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~-----~~~~~-gC~g~~~aL~~ 179 (399)
T PLN03171 107 AVPELAAEAAKKAIAEWGRPA-ADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRT-----MLHLN-GCFAGAAALRL 179 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEcCCCCCCCchHHHHHHHhCCCccccee-----eccCC-ccHHHHHHHHH
Confidence 345556678899999999997 999 7655221 223444688999997642111 12344 88888888876
Q ss_pred HHH
Q 044410 357 VRK 359 (402)
Q Consensus 357 ~~~ 359 (402)
+..
T Consensus 180 A~~ 182 (399)
T PLN03171 180 AKD 182 (399)
T ss_pred HHH
Confidence 654
No 211
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=63.51 E-value=17 Score=36.35 Aligned_cols=75 Identities=9% Similarity=-0.039 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEE-EecCCCCCCCHHHHHHHHcCCCC---ccccceeeccccchHHHHHHHHHHHHHcC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIF-SAFYGVDMPGADVRLMRLLGLKP---SVNRLMIYTQGCYMGGTVIRLAKDIAENN 188 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~i~~~LGl~~---~~~~~~~i~~~C~~~~~al~~A~~~i~~g 188 (402)
..+++++||+++|+.++|||.+.. ++.++..-+.-..-|.+.+|-.. ... ...-+..+++++..+..+...++.+
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K-~~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTK-GLTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCC-cccccChhhcchHHHHHHHHHHhcC
Confidence 357999999999999999998643 33333222333344555555321 111 2233455566666666666666655
No 212
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=62.59 E-value=21 Score=35.57 Aligned_cols=82 Identities=11% Similarity=0.105 Sum_probs=47.0
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEEc---C-C-CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVVH---P-G-GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~H---~-~-~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
.+...++++++|+++|+++ ++| .++.- + + +..+-..+...+|++.+....+ +. .+++|-..++..+
T Consensus 27 ~~L~~~a~~~al~dagi~~-~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~---v~----~~caSg~~av~~A 98 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDP-ALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYT---VN----VVCASGMLAVESA 98 (388)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCccee---ee----chhhHHHHHHHHH
Confidence 3455678889999999997 888 65441 1 1 2233456788899986443332 33 2333334445544
Q ss_pred HHhhhhhhcccCCCCCceEEEEE
Q 044410 358 RKKSIEEMKATTGEGLECGVLFG 380 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~ 380 (402)
... |..|. .|.|+..+
T Consensus 99 a~~------I~sG~-~d~vla~G 114 (388)
T PRK06366 99 ARE------IMLGE-RDLVIAGG 114 (388)
T ss_pred HHH------HhcCC-CCEEEEEe
Confidence 443 55552 25665444
No 213
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=62.43 E-value=15 Score=36.75 Aligned_cols=78 Identities=12% Similarity=0.008 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEE-EecCCCCCCCHHHHHHHHcCCC--Cccc---cceeeccccchHHHHHHHHHHH
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLIF-SAFYGVDMPGADVRLMRLLGLK--PSVN---RLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~i~~~LGl~--~~~~---~~~~i~~~C~~~~~al~~A~~~ 184 (402)
.-..+++++||+++|++++|||.|.. ++.++..-+.-..-+...++-. +.+. .....+...++++..+..+...
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~ 353 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQS 353 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHH
Confidence 45578899999999999999998753 3333332233333444444421 1110 0122334445555555555555
Q ss_pred HHcC
Q 044410 185 AENN 188 (402)
Q Consensus 185 i~~g 188 (402)
++.+
T Consensus 354 l~~~ 357 (407)
T cd00828 354 LEHG 357 (407)
T ss_pred HhcC
Confidence 6654
No 214
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=62.37 E-value=27 Score=34.69 Aligned_cols=42 Identities=24% Similarity=0.123 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
...|++++|+++|++++|||.+-...+. +.......+.||+.
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~f----t~~~~~~~e~lgl~ 301 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDCF----TIAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCC----cHHHHHHHHHcCCC
Confidence 4579999999999999999987543321 12334456777774
No 215
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=62.16 E-value=14 Score=37.09 Aligned_cols=43 Identities=19% Similarity=0.237 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
...|+++||+++|++++|||++=..- .++...-.-.+.||+..
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei~d----~f~~~~l~~le~lg~~~ 347 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEINE----AFAAQVLPSARELGIDE 347 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhhh----HHHHHHHHHHHHhCCCc
Confidence 45799999999999999999873211 11222233447788753
No 216
>PLN02287 3-ketoacyl-CoA thiolase
Probab=62.15 E-value=20 Score=36.59 Aligned_cols=72 Identities=18% Similarity=0.140 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc--c----eeeccccchHHHHHHHHHHHHH
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR--L----MIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~--~----~~i~~~C~~~~~al~~A~~~i~ 186 (402)
...|+++||+++|++++|||++=+.- .+....-...+.||+...+.. . .-.-.|++|....+.++.++-+
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~d----aFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~ 408 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEINE----AFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR 408 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----hHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999999884321 111222234578888643210 0 1111244555555555555544
Q ss_pred cC
Q 044410 187 NN 188 (402)
Q Consensus 187 ~g 188 (402)
.+
T Consensus 409 ~~ 410 (452)
T PLN02287 409 RG 410 (452)
T ss_pred cC
Confidence 33
No 217
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=62.04 E-value=16 Score=36.52 Aligned_cols=78 Identities=10% Similarity=-0.120 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEE-EecCCCCCCCHHHHHHHHcCCCCccc---cceeeccccchHHHHHHHHHHHHH
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLIF-SAFYGVDMPGADVRLMRLLGLKPSVN---RLMIYTQGCYMGGTVIRLAKDIAE 186 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~p~~a~~i~~~LGl~~~~~---~~~~i~~~C~~~~~al~~A~~~i~ 186 (402)
.=..+|.++||+++|++++|||+|.. ++.++..-+.-..-|.+-+|-...+. ....-+..+++++..+..+...++
T Consensus 270 ~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~ 349 (399)
T cd00832 270 PGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPRGVPVTAPKTMTGRLYAGGAPLDVATALLALR 349 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCCCCceeCCCchhcchHHHHHHHHHHHHHHHHh
Confidence 34568899999999999999997643 33334333333445666666432110 012223344555555555555566
Q ss_pred cC
Q 044410 187 NN 188 (402)
Q Consensus 187 ~g 188 (402)
.+
T Consensus 350 ~~ 351 (399)
T cd00832 350 DG 351 (399)
T ss_pred CC
Confidence 54
No 218
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=61.87 E-value=15 Score=36.52 Aligned_cols=45 Identities=13% Similarity=0.108 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLGL 157 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LGl 157 (402)
..+++++||+++|++++|||++. +++.++..-+.-...+...+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 56899999999999999999875 3344433333334455666664
No 219
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=61.83 E-value=25 Score=35.31 Aligned_cols=42 Identities=17% Similarity=0.305 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
...|++++|+++|+.++|||.+-+.- .+........+.||+.
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei~d----afa~~~l~~~e~lg~~ 339 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELNE----AFASQGLAVLRELGLA 339 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCccCc----HhHHHHHHHHHHcCCC
Confidence 36899999999999999999876321 2223344556788884
No 220
>PRK08304 stage V sporulation protein AD; Validated
Probab=61.63 E-value=45 Score=32.50 Aligned_cols=80 Identities=10% Similarity=0.131 Sum_probs=45.5
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEEc-CCCHHHH-HHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVVH-PGGDGLL-DQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK 360 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~H-~~~~~~~-~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~ 360 (402)
.+...++++++|+++|+++ +|| +++.. ..+..+. ..+++.||+|. +.-++.|++...-+.++..+
T Consensus 57 seLa~eAa~~ALekAGI~~-~DID~lI~Gdll~Q~~sAs~vA~~LGIPa---------~dV~gACST~~~AL~lAa~l-- 124 (337)
T PRK08304 57 RKMMEDAIQQALQKANLKK-SDIDYLLAGDLLNQIISANFAARELGIPF---------LGLYGACSTMMESLALGSML-- 124 (337)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCcchHHHHHHHhCCcE---------EEEeccCHHHHHHHHHHHHH--
Confidence 3455688899999999997 999 66443 2222222 24567788742 33456555544444433222
Q ss_pred hhhhhcccCCCCCceEEEEEEc
Q 044410 361 SIEEMKATTGEGLECGVLFGFG 382 (402)
Q Consensus 361 ~~~~g~i~~G~~~d~vll~~~G 382 (402)
++.|. .++||+++.-
T Consensus 125 ------I~SG~-ad~VLVV~Ss 139 (337)
T PRK08304 125 ------IDGGF-ADRVLAATSS 139 (337)
T ss_pred ------HhcCC-CCEEEEEEcc
Confidence 33331 2777776643
No 221
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=61.08 E-value=30 Score=34.40 Aligned_cols=49 Identities=8% Similarity=0.003 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLK 158 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~ 158 (402)
..+...++.++.|+++|+.++|||.+++....+ ..... -.++...++++
T Consensus 203 y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~-~~~~l~~~~~~ 252 (379)
T TIGR01835 203 YLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKA-LRHILKKNYED 252 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHH-HHHHHhhcccc
Confidence 445567889999999999999999988755322 11111 12355666655
No 222
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=60.33 E-value=19 Score=35.94 Aligned_cols=45 Identities=16% Similarity=0.221 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS 160 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~ 160 (402)
....|++++++++|++++|||.+=+..+ ++...-...+.||+...
T Consensus 289 ~~~~a~~~a~~~agl~~~Did~~Ei~d~----Fa~~~l~~~e~lG~~~~ 333 (390)
T PRK06504 289 APLPATERALKKAGMKIDDIDLYEVNEA----FASVPLAWLKATGADPE 333 (390)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEeccc----chHHHHHHHHHhCCCCC
Confidence 4456999999999999999998855332 23333456788998754
No 223
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=59.90 E-value=64 Score=34.23 Aligned_cols=50 Identities=16% Similarity=0.217 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
...+=..+.++++|+++++.+++||.|+++..+. .+|.+...|.+.+|..
T Consensus 290 ~ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGss-riP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 290 PLVQKTLSICRRALRDAGLSVEEIKGVVLVGGST-RMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcC-CChHHHHHHHHHhCCC
Confidence 3444456778899999999999999999876544 5688889999998865
No 224
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=58.74 E-value=24 Score=35.19 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
-...|+++|++++|++++|||++-+..+ ++.......+.||+.+
T Consensus 261 ~~~~a~~~a~~~agl~~~did~~e~~d~----f~~~~~~~~e~lg~~~ 304 (389)
T PRK07516 261 GPRRAWQRALAQAGVTLDDLSFVETHDC----FTIAELIEYEAMGLAP 304 (389)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecC----CCHHHHHHHHHcCCCC
Confidence 3457999999999999999998865443 2233345567777754
No 225
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=58.69 E-value=64 Score=34.39 Aligned_cols=49 Identities=12% Similarity=0.153 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
..+=..+.++++|+++++.+++||.|+++..+. .+|.+...|.+.+|..
T Consensus 307 l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~l~~~fg~~ 355 (616)
T PRK05183 307 LVKRTLLACRRALRDAGVEADEVKEVVMVGGST-RVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCEEEEECCcc-cChHHHHHHHHHhccC
Confidence 344455667899999999999999999876544 5688889999998865
No 226
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.60 E-value=17 Score=36.64 Aligned_cols=44 Identities=14% Similarity=0.023 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEE-ecCCCCCCCHHHHHHHHcC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFS-AFYGVDMPGADVRLMRLLG 156 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~i~~~LG 156 (402)
..+++++||+++|+.++|||.+... +.++...+.-..-|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5688999999999999999987653 3333322322334444444
No 227
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=58.39 E-value=33 Score=33.96 Aligned_cols=52 Identities=19% Similarity=0.144 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCC--------CHHHHHHHHcCCCC
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP--------GADVRLMRLLGLKP 159 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p--------~~a~~i~~~LGl~~ 159 (402)
....+-.+|++++++++++++++||+|-....|-++.| +....|++++|++-
T Consensus 68 ~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~V 127 (365)
T PRK09585 68 ALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITV 127 (365)
T ss_pred HHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCE
Confidence 46778899999999999999999998755444434444 24678999999874
No 228
>PRK06158 thiolase; Provisional
Probab=57.39 E-value=35 Score=33.96 Aligned_cols=79 Identities=13% Similarity=0.119 Sum_probs=47.3
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcCC-CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhh
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPG-GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSI 362 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~-~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~ 362 (402)
+...++++++|+++|+++ +|| .++.... ....-..+.+.||++.. .. ..-+.++++....|..+...
T Consensus 30 eL~~eA~~~Al~dAgl~~-~dID~iv~~~~~~~~~~~~la~~lGl~~~-~~-------~~~~~g~~s~~~al~~A~~~-- 98 (384)
T PRK06158 30 ELLAQAAHRALADAGLTM-ADVDGLFTASPDDALWGLSVAEYLGIRPR-FV-------DGTMIGGSSFLAHLLPAALA-- 98 (384)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEecCCCCCcHHHHHHHcCCCCe-ee-------ccccCccHHHHHHHHHHHHH--
Confidence 445577888999999997 888 5544332 11111358889999652 21 12345666666667666554
Q ss_pred hhhcccCCCCCceEEEE
Q 044410 363 EEMKATTGEGLECGVLF 379 (402)
Q Consensus 363 ~~g~i~~G~~~d~vll~ 379 (402)
|..|. .|.||++
T Consensus 99 ----I~sG~-~d~vLV~ 110 (384)
T PRK06158 99 ----LEAGL-CDVALIC 110 (384)
T ss_pred ----HHcCC-CCEEEEe
Confidence 55553 2555554
No 229
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=56.90 E-value=38 Score=32.53 Aligned_cols=91 Identities=9% Similarity=0.040 Sum_probs=57.0
Q ss_pred Cchh-HHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCC----HHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchH
Q 044410 277 RDVP-VAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGG----DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSV 350 (402)
Q Consensus 277 ~~v~-~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~----~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi 350 (402)
.++| +.+.....++.+++|+..++.+ +|| .+++-... ..+--.+.++||++++--..- +--.|-.++++-
T Consensus 69 N~ifie~a~~l~v~a~r~aL~~~~l~p-edId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvp---v~glGCaaga~g 144 (356)
T COG3424 69 NEIFIEEAVPLGVDALRRALDGSPLRP-EDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVP---VWGLGCAAGAAG 144 (356)
T ss_pred hhhHHHHHHHHHHHHHHHHhccCCCCH-HHCcEEEEEeeccccCCChhHHHHhhcCCCCccceee---eecchhhhhhhH
Confidence 3444 5677777889999999999997 998 66554432 345567899999988632221 224455555555
Q ss_pred HHHHHHHHHhhhhhhcccCCCCCceEEEEEE
Q 044410 351 FFILDEVRKKSIEEMKATTGEGLECGVLFGF 381 (402)
Q Consensus 351 ~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~ 381 (402)
+-.+.+..+. .|- .+++++++
T Consensus 145 lara~~y~ra-------~P~---~~vlvV~v 165 (356)
T COG3424 145 LARARDYCRA-------APD---ANVLVVCV 165 (356)
T ss_pred HHHHHHHHhh-------Ccc---ceEEEEEe
Confidence 5444444443 222 56666654
No 230
>PRK07937 lipid-transfer protein; Provisional
Probab=56.80 E-value=51 Score=32.41 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=27.0
Q ss_pred HHHHHHHHH-cCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410 115 EAALKAIKE-WGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS 160 (402)
Q Consensus 115 ~Aa~~aL~~-ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~ 160 (402)
.++++++++ +|++++|||.+=+-.+ ++.......+.||+...
T Consensus 250 ~~~~~a~~~aAgi~~~diD~~Ei~D~----F~~~~l~~~e~lGl~g~ 292 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVDVAELHAP----FTHQELILREALGLGDK 292 (352)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEeCC----ChHHHHHHHHHcCCCCC
Confidence 344555555 5999999998865443 23334456788998543
No 231
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=56.42 E-value=33 Score=34.43 Aligned_cols=83 Identities=12% Similarity=0.055 Sum_probs=47.3
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEEcCC-----CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVVHPG-----GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~-----~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
.+...++++++|+++|+++ +|| .++.-+. +..+-..+...+|++..+...+ +. ..++|-..++..+
T Consensus 27 ~eLa~~A~~~AL~~agl~~-~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~---V~----~~CaSg~~Al~~A 98 (404)
T PRK06205 27 EELAATVIRALVERTGIDP-ARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQ---LD----RRCGSGLQAVITA 98 (404)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceee---hh----hhhhHHHHHHHHH
Confidence 3445578889999999997 888 6654321 1334456778899875433222 22 2334444555544
Q ss_pred HHhhhhhhcccCCCCCceEEEEEE
Q 044410 358 RKKSIEEMKATTGEGLECGVLFGF 381 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~~ 381 (402)
... ++.|. .|.||.+++
T Consensus 99 ~~~------I~sG~-~d~vLv~G~ 115 (404)
T PRK06205 99 AMQ------VQTGA-ADVVIAGGA 115 (404)
T ss_pred HHH------HHcCC-CCEEEEeee
Confidence 443 44452 266666554
No 232
>PRK13410 molecular chaperone DnaK; Provisional
Probab=56.15 E-value=44 Score=35.97 Aligned_cols=51 Identities=14% Similarity=0.129 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
+...+-..+.++++|+++|+.+++||.|+++..+. .+|.+...|...+|..
T Consensus 305 ~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGss-RiP~V~~~l~~~fg~~ 355 (668)
T PRK13410 305 GDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGST-RMPMVQQLVRTLIPRE 355 (668)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcc-ccHHHHHHHHHHcCCC
Confidence 34455566678999999999999999998876554 5788888999988864
No 233
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=55.85 E-value=76 Score=30.32 Aligned_cols=112 Identities=18% Similarity=0.129 Sum_probs=64.9
Q ss_pred ecccccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCc
Q 044410 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMC 91 (402)
Q Consensus 12 ~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~ 91 (402)
+..++-.-+|. -||++-+++ |.+-+..+....... .. =+++....||.+..||.+|++-.++..
T Consensus 202 ~l~Nvt~Hsgs-dYiISrATF-P~YFiKeq~vv~~s~--t~----iDl~iFr~~iA~aLgIThRfVG~EP~c-------- 265 (352)
T COG3053 202 DLPNVTVHSGS-DYIISRATF-PAYFIKEQSVVNDSQ--TE----IDLKIFRKYIAPALGITHRFVGTEPFC-------- 265 (352)
T ss_pred cCCceEEecCC-CeEEEeccc-chhhhhhHHHHHHHH--HH----HHHHHHHHHHHHHhCcceeeecCCCCc--------
Confidence 34444333444 689988887 877666555443321 10 022334467888999999988543321
Q ss_pred cCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHc
Q 044410 92 CYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLL 155 (402)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~L 155 (402)
.....--+..+.-|++++....-|+.++.--..-...|=.|.++...|
T Consensus 266 ----------------~vT~~YNq~M~~~L~~~~~~~p~I~vvei~Rk~~~~~~ISAS~VR~~l 313 (352)
T COG3053 266 ----------------RVTAIYNQQMRYWLEDPTISAPPIEVVEIERKKYQEMPISASRVRQLL 313 (352)
T ss_pred ----------------HHHHHHHHHHHHHHhccCCCCCceEEEEeehhhhcCCcccHHHHHHHH
Confidence 123333445677788888877789888875443334443444444433
No 234
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=55.84 E-value=23 Score=35.64 Aligned_cols=78 Identities=5% Similarity=-0.099 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHH-cCCCCCCccEEEE-EecCCCCCCCHHHHHHHHcCCCC--ccc----cceeeccccchHHHHHHHHH
Q 044410 111 KLGKEAALKAIKE-WGQPVSKITHLIF-SAFYGVDMPGADVRLMRLLGLKP--SVN----RLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 111 ~la~~Aa~~aL~~-ag~~~~dId~li~-~s~~~~~~p~~a~~i~~~LGl~~--~~~----~~~~i~~~C~~~~~al~~A~ 182 (402)
.-..+|+++||++ +|++++|||+|-. ++.++..-+.-..-+.+-+|-.. ... ....-+...++++..+..+.
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~ 362 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTI 362 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHH
Confidence 3456899999999 9999999998743 34333222222234555555321 110 01223344455555555555
Q ss_pred HHHHcC
Q 044410 183 DIAENN 188 (402)
Q Consensus 183 ~~i~~g 188 (402)
..|+.+
T Consensus 363 l~l~~~ 368 (421)
T PTZ00050 363 LSLYEQ 368 (421)
T ss_pred HHHHcC
Confidence 556655
No 235
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=55.67 E-value=25 Score=35.01 Aligned_cols=82 Identities=12% Similarity=0.114 Sum_probs=49.8
Q ss_pred hHHHHHHHhhccCCCCCCcce-EEEEcCCCH-----HHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 044410 286 YVDKCLSNAMSPIGISDWNSL-FYVVHPGGD-----GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK 359 (402)
Q Consensus 286 ~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~-----~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~ 359 (402)
...++++++|+++|+++ ++| .++..+... ..-..+.+.+|++.. ...+ + |..++|-..+|..+..
T Consensus 24 La~~A~~~AL~dAgi~~-~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~-~~~~---v----~~~casg~~al~~A~~ 94 (385)
T PRK12578 24 LAWESIKEALNDAGVSQ-TDIELVVVGSTAYRGIELYPAPIVAEYSGLTGK-VPLR---V----EAMCATGLAASLTAYT 94 (385)
T ss_pred HHHHHHHHHHHHcCCCH-HHCCEEEEEecccccccCChHHHHHHHhCCCCC-CeeE---E----eccCHHHHHHHHHHHH
Confidence 34567889999999997 888 665443211 123457888999763 2232 3 3455555666665554
Q ss_pred hhhhhhcccCCCCCceEEEEEEcc
Q 044410 360 KSIEEMKATTGEGLECGVLFGFGP 383 (402)
Q Consensus 360 ~~~~~g~i~~G~~~d~vll~~~G~ 383 (402)
. |+.|. .+.+|++++..
T Consensus 95 ~------I~sG~-~~~vLvvg~e~ 111 (385)
T PRK12578 95 A------VASGL-VDMAIAVGVDK 111 (385)
T ss_pred H------HHCCC-CCEEEEEEEee
Confidence 3 44452 27788777653
No 236
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=55.55 E-value=23 Score=35.44 Aligned_cols=44 Identities=14% Similarity=0.097 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS 160 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~ 160 (402)
...|+++||+++|++++|||.+=+.-+ +....-.-.+.||+...
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~d~----fa~~~l~~~e~lg~~~~ 340 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEINEA----FAVVTMAAMKEHGLPHE 340 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehhhH----HHHHHHHHHHHhCCCcc
Confidence 467999999999999999998832111 11111222467887653
No 237
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=55.36 E-value=35 Score=34.60 Aligned_cols=82 Identities=21% Similarity=0.274 Sum_probs=49.1
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcCCC-----HHHHH-HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPGG-----DGLLD-QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~-----~~~~~-~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
+...++++++|+++|+++ +|| .++..+.+ ..+.. .+...+|++. +...+ + +.+++|-..++..+
T Consensus 39 eL~~eA~~~Al~dagl~~-~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~-~~~~~---v----~~~~aSg~~ai~~A 109 (430)
T PRK06365 39 ERVKKAFDYAMNDAGLTL-ADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP-KPSKR---I----EGGGATGGLAFQAG 109 (430)
T ss_pred HHHHHHHHHHHHHcCCCH-HHcCEEEEecccccccccchhhHHHHHhcCCCC-CceEE---E----eCCcHHHHHHHHHH
Confidence 345578888999999997 888 66554322 11222 3578999976 33221 2 23455555666665
Q ss_pred HHhhhhhhcccCCCCCceEEEEEEc
Q 044410 358 RKKSIEEMKATTGEGLECGVLFGFG 382 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~~G 382 (402)
... |+.|. .|.||.+++-
T Consensus 110 ~~~------I~sG~-~~~vLv~G~e 127 (430)
T PRK06365 110 YEE------IASGR-MDCVAVYGFE 127 (430)
T ss_pred HHH------HHcCC-CCEEEEEEee
Confidence 554 55563 3677776665
No 238
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=55.11 E-value=35 Score=34.09 Aligned_cols=84 Identities=12% Similarity=0.067 Sum_probs=47.0
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEEcCC-----CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVVHPG-----GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~-----~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
.+...++++++|+++|+++ ++| .++.-+. +...-+.+...+|++......+ +.. .++|-..+|..+
T Consensus 27 ~eLa~~A~~~aL~~agl~~-~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~---V~~----~CaSg~~Al~~A 98 (393)
T PRK08235 27 TELGGIAIKEALERANVSA-EDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTET---VNK----VCASGLRAVTLA 98 (393)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceee---hhh----hhhHHHHHHHHH
Confidence 3445678889999999997 888 6655332 1233345678899975443332 333 233334444444
Q ss_pred HHhhhhhhcccCCCCCceEEEEEEc
Q 044410 358 RKKSIEEMKATTGEGLECGVLFGFG 382 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~~G 382 (402)
.+. |+.|. .|.+|.+++-
T Consensus 99 ~~~------I~sG~-~d~vLvvG~E 116 (393)
T PRK08235 99 DQI------IRAGD-ASVIVAGGME 116 (393)
T ss_pred HHH------HHCCC-CCEEEEEeee
Confidence 332 33442 2667776653
No 239
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=53.69 E-value=59 Score=34.95 Aligned_cols=50 Identities=12% Similarity=0.220 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
..+=....++++|+++|+++++||.|+++..+. .+|.+-..|...+|...
T Consensus 332 l~~r~~~~v~~~L~~a~~~~~dId~VvLVGGss-riP~V~~~l~~~fg~~~ 381 (657)
T PTZ00186 332 LIERSIAPCKQCMKDAGVELKEINDVVLVGGMT-RMPKVVEEVKKFFQKDP 381 (657)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCCEEEEECCcc-cChHHHHHHHHHhCCCc
Confidence 344455678899999999999999999876544 57888899999998643
No 240
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=53.36 E-value=31 Score=34.39 Aligned_cols=78 Identities=15% Similarity=-0.043 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEE-ecCCCCCCCHHHHHHHHcCCCC---------ccccceeeccccchHHHHHH
Q 044410 110 PKLGKEAALKAIKEWGQPVSKITHLIFS-AFYGVDMPGADVRLMRLLGLKP---------SVNRLMIYTQGCYMGGTVIR 179 (402)
Q Consensus 110 ~~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~i~~~LGl~~---------~~~~~~~i~~~C~~~~~al~ 179 (402)
..-..+|+++||+++|++++|||.+... +.++..-..-..-|..-++-.. ... ....+...++++..+.
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k-~~~Gh~~~aag~~~l~ 356 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVK-SNIGHLEAAAGLAGLI 356 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCc-CccccchhhhHHHHHH
Confidence 3455689999999999999999987543 3333221222233333333210 111 1223334455555565
Q ss_pred HHHHHHHcC
Q 044410 180 LAKDIAENN 188 (402)
Q Consensus 180 ~A~~~i~~g 188 (402)
.+...++.+
T Consensus 357 ~~~~~l~~~ 365 (421)
T cd00833 357 KVVLALEHG 365 (421)
T ss_pred HHHHHHhcC
Confidence 566666655
No 241
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=52.89 E-value=28 Score=34.54 Aligned_cols=43 Identities=14% Similarity=0.207 Sum_probs=30.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410 114 KEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS 160 (402)
Q Consensus 114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~ 160 (402)
..|+++|++++|+.++|||.+=+.- .+........+.||+...
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~d----~Fa~~~~~~~e~lG~~~~ 325 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEINE----AFAPVVLAWLKETGADPA 325 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeecc----cchHHHHHHHHHhCCCch
Confidence 5799999999999999999874322 222333455678898754
No 242
>PRK08256 lipid-transfer protein; Provisional
Probab=51.82 E-value=37 Score=33.81 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS 160 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~ 160 (402)
...|++++++++|++++|||.+-+..+ ++...-...+.||+.+.
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d~----f~~~~l~~le~lg~~~~ 309 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHDC----FSANELLTYEALGLCPE 309 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeeccC----CcHHHHHHHHHcCCCCC
Confidence 457999999999999999998765443 23334455678887654
No 243
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=51.79 E-value=55 Score=32.66 Aligned_cols=84 Identities=13% Similarity=0.109 Sum_probs=48.8
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEEc-CCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhh
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVVH-PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKS 361 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~H-~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~ 361 (402)
.+.+.+++.++|+++|+++ +|| .++.. .........+.+.||+... ... ..+.++++....+..+...
T Consensus 26 ~~L~~eA~~~Al~DAgl~~-~dID~~~~~~~~~~~~~~~~~~~lGl~~~-~~~-------~v~~gg~s~~~a~~~A~~~- 95 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSL-ADVDGYFCAGDAPGLGPASMVDYLGLKLR-HVD-------STETGGSSYLAHVGHAAQA- 95 (388)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCCCccHHHHHHhCCCCCe-eec-------cccCCcHHHHHHHHHHHHH-
Confidence 3445577788899999996 888 55442 1111111248899999642 221 2334555555556655544
Q ss_pred hhhhcccCCCCCceEEEEEEcc
Q 044410 362 IEEMKATTGEGLECGVLFGFGP 383 (402)
Q Consensus 362 ~~~g~i~~G~~~d~vll~~~G~ 383 (402)
|+.|. .|.||++++..
T Consensus 96 -----I~sG~-~d~vLvvg~e~ 111 (388)
T PRK08142 96 -----IAAGK-CSVALITLAGR 111 (388)
T ss_pred -----HHcCC-CCEEEEEeeee
Confidence 55552 37777776553
No 244
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=51.52 E-value=35 Score=34.20 Aligned_cols=43 Identities=14% Similarity=0.209 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
...|+++|++++|++++|||.+-+.-+ ++...-...+.||+.+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D~----fa~~~l~~le~lGl~~ 320 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHDC----FTPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeecc----chHHHHHHHHHcCCCC
Confidence 467999999999999999998765443 2333445567888764
No 245
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=51.34 E-value=67 Score=31.98 Aligned_cols=41 Identities=24% Similarity=0.314 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGL 157 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl 157 (402)
...|++++|+++|++++|||.+=+.- .+....-...+.||+
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~d----aFa~~~l~~~e~lg~ 322 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNE----AFAAQALPCLKDLGL 322 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEcc----ccHHHHHHHHHHcCC
Confidence 46789999999999999999875522 122333445578887
No 246
>PLN03184 chloroplast Hsp70; Provisional
Probab=51.21 E-value=57 Score=35.16 Aligned_cols=52 Identities=15% Similarity=0.226 Sum_probs=41.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
+...+-..+.++++|++++++++|||.|+++..+. .+|.+-..|...+|...
T Consensus 342 ~~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGGss-riP~V~~~i~~~fg~~~ 393 (673)
T PLN03184 342 SDLLDRCKTPVENALRDAKLSFKDIDEVILVGGST-RIPAVQELVKKLTGKDP 393 (673)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHccEEEEECCcc-ccHHHHHHHHHHhCCCc
Confidence 34445556678899999999999999999876554 57888899999998643
No 247
>CHL00094 dnaK heat shock protein 70
Probab=51.10 E-value=59 Score=34.64 Aligned_cols=50 Identities=18% Similarity=0.200 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
...+-....++++|+++++.+++||.|+++..+. .+|.+...+.+.+|..
T Consensus 306 ~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~l~~~fg~~ 355 (621)
T CHL00094 306 DLINRCRIPVENALKDAKLDKSDIDEVVLVGGST-RIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcc-CChHHHHHHHHHhCCC
Confidence 3444556668899999999999999999877554 5788889999999864
No 248
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=50.40 E-value=35 Score=34.62 Aligned_cols=25 Identities=12% Similarity=0.028 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEE
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIF 136 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~ 136 (402)
-..+|+++||+++|++++|||.|-.
T Consensus 300 ~~~~a~~~Al~~Agi~~~dId~ve~ 324 (437)
T PLN02836 300 GAVLAMTRALQQSGLHPNQVDYVNA 324 (437)
T ss_pred HHHHHHHHHHHHcCCCHhHcCEEEc
Confidence 3567899999999999999998743
No 249
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=50.07 E-value=38 Score=33.88 Aligned_cols=47 Identities=11% Similarity=0.005 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEE-ecCCCCCCCHHHHHHHHcCC
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLIFS-AFYGVDMPGADVRLMRLLGL 157 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~i~~~LGl 157 (402)
.....++++||+++|+.++|||.+... +.++..-..-...+..-+|.
T Consensus 279 ~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 279 PAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 345678999999999999999987543 43332222223445555553
No 250
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=49.71 E-value=48 Score=32.32 Aligned_cols=83 Identities=16% Similarity=-0.050 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCC------CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 044410 110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP------GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKD 183 (402)
Q Consensus 110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p------~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~ 183 (402)
.+-.....+++|+++|++.+|||+|-++ ..|-..+ ..|..++-.++.+ . .--+.|-+=+.+-.+...
T Consensus 51 ~e~i~~li~~al~eA~~~~~dID~IA~T-~gPGL~gaL~VG~~~Ak~LA~a~~kP-----l-i~VnH~~gHi~a~~l~~~ 123 (342)
T COG0533 51 VENIPPLIEEALAEAGVSLEDIDAIAVT-AGPGLGGALLVGATAAKALALALNKP-----L-IPVNHLEGHIEAARLETG 123 (342)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCEEEEe-cCCCchhHHHHHHHHHHHHHHHhCCC-----E-eecchHHHHHHHHHhccC
Confidence 4455567899999999999999988774 4442223 2344455555544 2 234556665544333222
Q ss_pred HHHcCCCCeEEEEEeccCc
Q 044410 184 IAENNPGARVLVVCSDIRV 202 (402)
Q Consensus 184 ~i~~g~~~~vLvv~~e~~s 202 (402)
. -..=.+|+|++-...
T Consensus 124 ~---~~p~v~LlVSGGHTq 139 (342)
T COG0533 124 L---AFPPVALLVSGGHTQ 139 (342)
T ss_pred C---CCCcEEEEEecCceE
Confidence 1 112346666665543
No 251
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=49.37 E-value=22 Score=35.07 Aligned_cols=44 Identities=20% Similarity=0.109 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
-...|++++|+++|++++|||.+=+..+ ++...-...+.||+..
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 3457999999999999999998865443 2334455667788765
No 252
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=49.00 E-value=46 Score=33.39 Aligned_cols=50 Identities=6% Similarity=0.040 Sum_probs=32.9
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEEcCC------CHHHHHHHHHHcCCCccccHH
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVVHPG------GDGLLDQVEKTLGLRKEKLWA 334 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~------~~~~~~~~~~~lgi~~ek~~~ 334 (402)
.+....+++++|+++|+++ ++| .+++-+. +..+.+.+...+|+|.+.-..
T Consensus 27 ~eL~~~a~~~al~~agi~~-~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~ 83 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPG-DDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQ 83 (401)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEEeccccccccccHHHHHHHhcCCCCCCcee
Confidence 3445678889999999996 888 5544221 233555677889988654443
No 253
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=48.19 E-value=83 Score=31.34 Aligned_cols=42 Identities=24% Similarity=0.281 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
...|++++|+++|++++|||.+=+..+ ++...-...+.||+.
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d~----F~~~~l~~~e~lg~~ 325 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNEA----FAAQSLPCLKDLGLL 325 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeccc----chHHHHHHHHHcCCC
Confidence 467889999999999999998855332 233344556788873
No 254
>PRK06059 lipid-transfer protein; Provisional
Probab=48.14 E-value=60 Score=32.41 Aligned_cols=82 Identities=16% Similarity=0.111 Sum_probs=46.7
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcC------CCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHP------GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~------~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
+...++++++|+++|+++ ++| .++..+ .+...-..+.+.||+..-... + + |.++++-..+|..+
T Consensus 25 ~La~~A~~~Al~dAgl~~-~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~-~---v----~~~Casg~~al~~A 95 (399)
T PRK06059 25 EYGVVAARAALADAGLDW-RDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVS-S---S----YAACASGSQALQSA 95 (399)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCcee-c---c----cchhHHHHHHHHHH
Confidence 344567888999999997 888 665321 111223568889998542222 1 2 23444445555555
Q ss_pred HHhhhhhhcccCCCCCceEEEEEEc
Q 044410 358 RKKSIEEMKATTGEGLECGVLFGFG 382 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~~G 382 (402)
... |+.|. .|.+|+++.-
T Consensus 96 ~~~------I~sG~-~~~vLvvg~e 113 (399)
T PRK06059 96 RAQ------ILAGL-CDVALVVGAD 113 (399)
T ss_pred HHH------HHCCC-CCEEEEEEEc
Confidence 443 44452 2667766654
No 255
>PRK13411 molecular chaperone DnaK; Provisional
Probab=47.63 E-value=67 Score=34.50 Aligned_cols=48 Identities=17% Similarity=0.237 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGL 157 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl 157 (402)
..+=..+.++++|+++++.+++||.|+++..+. .+|.+-..|.+.+|-
T Consensus 306 l~~~~~~~i~~~L~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~f~~ 353 (653)
T PRK13411 306 LVEATIEPMQQALKDAGLKPEDIDRVILVGGST-RIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCC-CcchHHHHHHHHcCC
Confidence 344456678899999999999999998876544 578888999999874
No 256
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=47.59 E-value=31 Score=33.13 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=40.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcc--------------ccceeeccc--cchHHHH
Q 044410 114 KEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSV--------------NRLMIYTQG--CYMGGTV 177 (402)
Q Consensus 114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~--------------~~~~~i~~~--C~~~~~a 177 (402)
.+.+.+=|++.|.+|+|-|+||.+-- ......+...+..+-|+.-.. ...+.-..| |++.+..
T Consensus 206 ~dTI~~h~~D~g~~p~dYDlIvTGDL-g~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~~ 284 (329)
T PF07451_consen 206 ADTIEQHFKDTGRSPDDYDLIVTGDL-GKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVLC 284 (329)
T ss_dssp HHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhhcCeEEecch-HHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHHH
Confidence 34455667899999999998875321 112222334444444542110 002222333 3333322
Q ss_pred HHHHHHHHHcCCCCeEEEEEeccC
Q 044410 178 IRLAKDIAENNPGARVLVVCSDIR 201 (402)
Q Consensus 178 l~~A~~~i~~g~~~~vLvv~~e~~ 201 (402)
-.-...++.|..++||+|+.-..
T Consensus 285 -g~ll~~l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 285 -GYLLPKLRKGELKRVLFVATGAL 307 (329)
T ss_dssp -HCHHHHHHTTS-SEEEEEEEEE-
T ss_pred -HHHHHHHHcCCceEEEEEEchhh
Confidence 23344567789999999986543
No 257
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=47.56 E-value=47 Score=33.19 Aligned_cols=82 Identities=12% Similarity=0.074 Sum_probs=46.1
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEE-cC---C-CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVV-HP---G-GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~-H~---~-~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
.+...++++++|+++|+++ ++| .++. +- . +..+...+...+|++......+ +.. +++|-..++..+
T Consensus 26 ~~L~~~a~~~al~dAgl~~-~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~---v~~----~caSg~~av~~A 97 (394)
T PLN02644 26 TELGSIAIQAALERAGVDP-ALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTT---VNK----VCASGMKAVMLA 97 (394)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEE---Eec----cchHHHHHHHHH
Confidence 3445678889999999996 888 5544 31 1 2234456788899965432221 322 333334455544
Q ss_pred HHhhhhhhcccCCCCCceEEEEE
Q 044410 358 RKKSIEEMKATTGEGLECGVLFG 380 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~ 380 (402)
.+. |..|. .|.||..+
T Consensus 98 a~~------I~sG~-~d~vlv~G 113 (394)
T PLN02644 98 AQS------IQLGI-NDVVVAGG 113 (394)
T ss_pred HHH------HHcCC-CCEEEEEe
Confidence 443 44553 26666444
No 258
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=47.29 E-value=37 Score=33.26 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEec
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~ 139 (402)
++..+|..+...+++++|+++.+|+|+|+=+|.
T Consensus 63 esV~elV~dtl~e~~k~A~l~i~DL~FVVRSTG 95 (445)
T TIGR03285 63 ESVAELVKDTLKESLKKAGLDIDDLDFVVRSTG 95 (445)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhccEEEeccc
Confidence 368999999999999999999999998876554
No 259
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=46.37 E-value=47 Score=33.19 Aligned_cols=43 Identities=23% Similarity=0.229 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
...|+++||+++|++++|||.+=+..+ ++...-...+.||+..
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d~----Fa~~~l~~~e~lgl~~ 313 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHDA----FAANACATNEALGLCP 313 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhhh----hHHHHHHHHHHhCCCc
Confidence 468999999999999999997755332 2233344557777654
No 260
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=46.35 E-value=83 Score=33.57 Aligned_cols=51 Identities=22% Similarity=0.309 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
+...+=..+.++++|+++++.+.+||.|+++..+. .+|.+...|.+.+|..
T Consensus 303 ~~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~fg~~ 353 (627)
T PRK00290 303 EDLVERTIEPCKQALKDAGLSVSDIDEVILVGGST-RMPAVQELVKEFFGKE 353 (627)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcC-CChHHHHHHHHHhCCC
Confidence 33444556678899999999999999999877654 4788889999998864
No 261
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=45.39 E-value=42 Score=33.55 Aligned_cols=49 Identities=12% Similarity=0.029 Sum_probs=33.2
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcCC-----CHHHHHHHHHHcCCCccccHH
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPG-----GDGLLDQVEKTLGLRKEKLWA 334 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~-----~~~~~~~~~~~lgi~~ek~~~ 334 (402)
+....+++++|+++|+++ ++| .+++-+. +..+.+.+...+|++.+.-..
T Consensus 29 ~L~~~a~~~al~~agi~~-~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~ 83 (392)
T PRK06633 29 MLAAHLIKDILQNSKIDP-ALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGY 83 (392)
T ss_pred HHHHHHHHHHHHHcCCCH-HHcCEEEEEecCccccccHHHHHHHHHCCCCCCccch
Confidence 345578889999999996 888 5544221 234556677889998654444
No 262
>PRK07855 lipid-transfer protein; Provisional
Probab=45.35 E-value=77 Score=31.58 Aligned_cols=82 Identities=13% Similarity=0.182 Sum_probs=45.4
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhh
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIE 363 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~ 363 (402)
+.+.++++++|+++|++. +|| .++........-..+.+.||+..-+...+ +.. ++++.-..|..+...
T Consensus 26 ~L~~eA~~~Al~DAgl~~-~dID~~~~~~~~~~~~~~l~~~lGl~~~~~~~~---v~~----gg~sg~~~~~~A~~~--- 94 (386)
T PRK07855 26 RLACEAVLAALDDAGLAP-SDVDGLVTFTMDTNPEIAVARALGIGELKFFSR---IHY----GGGAACATVQQAAMA--- 94 (386)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEecCccccHHHHHHHCCCCCCcceee---ecC----CcHHHHHHHHHHHHH---
Confidence 445577788899999996 888 55432111111134788999965222211 222 333333345555443
Q ss_pred hhcccCCCCCceEEEEEE
Q 044410 364 EMKATTGEGLECGVLFGF 381 (402)
Q Consensus 364 ~g~i~~G~~~d~vll~~~ 381 (402)
|+.|. .|.||+++.
T Consensus 95 ---I~sG~-~d~vLv~g~ 108 (386)
T PRK07855 95 ---VATGV-ADVVVCYRA 108 (386)
T ss_pred ---HHCCC-CCEEEEEee
Confidence 55553 378887666
No 263
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=44.96 E-value=66 Score=32.19 Aligned_cols=84 Identities=8% Similarity=0.041 Sum_probs=48.8
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEE-cCC----CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVV-HPG----GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~-H~~----~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
.+...++++++|+++|+++ +|| .++. +.. ....-..+.+.+|++. +...+ + +.+++|-..++..+
T Consensus 28 ~~L~~ea~~~AL~dagl~~-~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~-~~~~~---v----~~~c~sg~~ai~~A 98 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEP-KDIDAAWFGTHYDEIGSGKSGTPLSRALRLPN-IPVTR---V----ENFCATGSEAFRGA 98 (398)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEEeccccccccchhHHHHHHcCCCC-CCEEE---E----ecccHHHHHHHHHH
Confidence 3445678899999999997 888 5543 311 1112245778899974 32221 2 33444445555555
Q ss_pred HHhhhhhhcccCCCCCceEEEEEEcc
Q 044410 358 RKKSIEEMKATTGEGLECGVLFGFGP 383 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~~G~ 383 (402)
... |..|. .|.++.+++..
T Consensus 99 ~~~------I~sG~-~d~vlv~G~e~ 117 (398)
T PRK06157 99 VYA------VASGA-YDIALALGVEK 117 (398)
T ss_pred HHH------HHCCC-CCEEEEEEEee
Confidence 543 45552 27777777653
No 264
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=44.12 E-value=62 Score=32.22 Aligned_cols=83 Identities=11% Similarity=0.024 Sum_probs=46.0
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcCC-CH-----HHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPG-GD-----GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~-~~-----~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
+...++++++|+++|+++ +|| .++..+. +. ..-..+.+.||+...... +. |.++++-...+..+
T Consensus 26 eL~~eAa~~Al~dAgl~~-~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~~~-------~v-~~~casg~~al~~A 96 (386)
T PRK08313 26 GLVREAIDRALADAGLTW-DDIDAVVVGKAPDFFEGVMMPELFLADALGATGKPLI-------RV-HTAGSVGGSTAVVA 96 (386)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEeccccccccccCchHHHHHhcCCCCCceE-------EE-eccCHHHHHHHHHH
Confidence 345567788999999997 888 5544321 11 011357889999643221 12 22333333344444
Q ss_pred HHhhhhhhcccCCCCCceEEEEEEcc
Q 044410 358 RKKSIEEMKATTGEGLECGVLFGFGP 383 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~~G~ 383 (402)
... |..|. .|.||++++..
T Consensus 97 ~~~------I~sG~-~~~vLVvg~e~ 115 (386)
T PRK08313 97 ASL------VQSGV-YRRVLAVAWEK 115 (386)
T ss_pred HHH------HHCCC-CCEEEEEEEEE
Confidence 332 44452 37888888764
No 265
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=43.97 E-value=79 Score=33.45 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
+...+=..+.++++|+++++.+++||.|+++..+. .+|.+-..|.+.+|..
T Consensus 301 ~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGss-riP~v~~~i~~~f~~~ 351 (595)
T TIGR02350 301 ADLVERTKEPVRQALKDAGLSASDIDEVILVGGST-RIPAVQELVKDFFGKE 351 (595)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCcc-cChHHHHHHHHHhCCc
Confidence 34444556678899999999999999999877654 4788889999999843
No 266
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=43.67 E-value=93 Score=33.41 Aligned_cols=44 Identities=9% Similarity=0.128 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGL 157 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl 157 (402)
..+.++++|+++++++++||.|+++..+. .+|.+-..|.+.+|-
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~i~~~f~~ 358 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGST-RIPKVQSLIKDFFNG 358 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCCC-CChhHHHHHHHHhCC
Confidence 45568899999999999999998876544 578888899999874
No 267
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=42.70 E-value=70 Score=34.42 Aligned_cols=49 Identities=20% Similarity=0.278 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
..+=..+.++++|+++|+.+++||.|+++..+. .+|.+...|...+|..
T Consensus 346 l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 346 LLKKTIEPCEKCIKDAGVKKDELNDVILVGGMT-RMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEECCcc-CChHHHHHHHHHhCCC
Confidence 334445667899999999999999999876544 5688888999998864
No 268
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=42.22 E-value=80 Score=31.96 Aligned_cols=49 Identities=6% Similarity=-0.011 Sum_probs=32.1
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcC---CC--HHHHHHHHHHcCCCccccHH
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHP---GG--DGLLDQVEKTLGLRKEKLWA 334 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~---~~--~~~~~~~~~~lgi~~ek~~~ 334 (402)
+....+++++|+++|+++ ++| .+++=+ .+ ..+.+.+...+|++..+-..
T Consensus 31 eL~~~a~~~al~~agl~~-~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~ 85 (428)
T PRK08963 31 DLGKMVVGELLARSEIDP-ELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAY 85 (428)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcce
Confidence 344678889999999996 888 554422 11 33455677888998544333
No 269
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=41.71 E-value=26 Score=33.01 Aligned_cols=31 Identities=16% Similarity=0.034 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEec
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~ 139 (402)
-.+......+++|++++++++|||.|.++..
T Consensus 29 H~~~L~~~i~~~l~~~~~~~~did~iavt~G 59 (268)
T PF00814_consen 29 HSENLPPLIEELLKEAGISLSDIDAIAVTRG 59 (268)
T ss_dssp HHHHHHHHHHHHHHHHTS-GGGESEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 3555667899999999999999999988665
No 270
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=41.69 E-value=2.1e+02 Score=26.24 Aligned_cols=61 Identities=20% Similarity=0.218 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g 188 (402)
+..+....+++++++-| .|.|+.++. .+..++.+++..+|++ ..| +-..+..+|..++..+
T Consensus 158 ~~~~l~~~~~~a~~edg-----AeaIiLGCA---Gms~la~~Lq~~~gvP-----VID------gv~Aav~~a~~L~~~~ 218 (230)
T COG4126 158 AEALLVIEAAEALKEDG-----AEAIILGCA---GMSDLADQLQKAFGVP-----VID------GVAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHHHHHhhhcC-----CCEEEEcCc---cHHHHHHHHHHHhCCC-----ccc------chHHHHHHHHHHHhhc
Confidence 55677777777776544 567887765 4456789999999965 233 2345667777777665
No 271
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=40.17 E-value=92 Score=31.10 Aligned_cols=84 Identities=13% Similarity=0.083 Sum_probs=49.0
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEEcCC------CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVVHPG------GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE 356 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~------~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~ 356 (402)
.+....+++++|+++|+++ ++| .++.-+. +..+-+.+...+|++.+....+ + |..++|-..++..
T Consensus 28 ~dL~~~A~~~aL~~agi~~-~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~---V----~~aCaSg~~Al~~ 99 (392)
T PRK07108 28 ATLGGHVVQHAVERAKLDP-AEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMT---V----NRFCSSGLQTIAL 99 (392)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceee---e----cchhhHHHHHHHH
Confidence 3445678889999999997 887 5544221 1235667778889875443322 2 2334444455555
Q ss_pred HHHhhhhhhcccCCCCCceEEEEEEc
Q 044410 357 VRKKSIEEMKATTGEGLECGVLFGFG 382 (402)
Q Consensus 357 ~~~~~~~~g~i~~G~~~d~vll~~~G 382 (402)
+... |+.|. .|.++..|+-
T Consensus 100 A~~~------I~sG~-~d~vlagGvE 118 (392)
T PRK07108 100 AAQR------VIAGE-GDVFVAGGVE 118 (392)
T ss_pred HHHH------HHCCC-CCEEEEEEEe
Confidence 4443 44552 2677777664
No 272
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=39.56 E-value=83 Score=25.66 Aligned_cols=44 Identities=18% Similarity=0.209 Sum_probs=30.2
Q ss_pred HHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHc-CCCCcc
Q 044410 115 EAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLL-GLKPSV 161 (402)
Q Consensus 115 ~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~L-Gl~~~~ 161 (402)
+-..+.+++.+++++||-.++|+.+.- -.+|+ ..+.++ |+...+
T Consensus 24 eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~~Vp 70 (117)
T TIGR01796 24 ELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWTDVP 70 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCCCcc
Confidence 345677889999999999998854332 24564 445566 888654
No 273
>PRK14878 UGMP family protein; Provisional
Probab=39.13 E-value=65 Score=31.24 Aligned_cols=46 Identities=20% Similarity=0.062 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCC------CHHHHHHHHcCCC
Q 044410 112 LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP------GADVRLMRLLGLK 158 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p------~~a~~i~~~LGl~ 158 (402)
....+.+++|+++|++++|||.|.++.. |-..+ ..|..++..++.+
T Consensus 47 ~l~~~i~~~l~~a~~~~~did~Iavt~g-PG~~~~lrvg~~~Ak~la~~~~~p 98 (323)
T PRK14878 47 VAPELLRKALEKAGISIEDIDAVAVSQG-PGLGPALRVGATAARALALKYNKP 98 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecC-CCcccchHHHHHHHHHHHHHhCCC
Confidence 3347889999999999999998887553 42222 3356667677765
No 274
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=38.64 E-value=1.2e+02 Score=27.64 Aligned_cols=50 Identities=12% Similarity=-0.004 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCC----CCHHHHHHHHcCCC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDM----PGADVRLMRLLGLK 158 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~----p~~a~~i~~~LGl~ 158 (402)
..+.....++++|.++|+...|||.|+++..-+ +.. =+.|.-++..++++
T Consensus 37 hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~ip 91 (220)
T COG1214 37 HAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIP 91 (220)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCC
Confidence 567777889999999999999999999976543 321 24455556555555
No 275
>PRK00768 nadE NAD synthetase; Reviewed
Probab=37.39 E-value=3.6e+02 Score=25.45 Aligned_cols=31 Identities=0% Similarity=-0.052 Sum_probs=19.4
Q ss_pred CHHHHHHHHcCCCCccccceeeccccchHHHHH
Q 044410 146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVI 178 (402)
Q Consensus 146 ~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al 178 (402)
..+..+++.||+.... ..++.....++...+
T Consensus 90 ~da~~la~~lgi~~~~--~i~I~~~~~~~~~~l 120 (268)
T PRK00768 90 DDAQDALAFIQPDRVL--TVNIKPAVDASVAAL 120 (268)
T ss_pred HHHHHHHHhcCCCeeE--EEECHHHHHHHHHHH
Confidence 4677899999984222 456665555554443
No 276
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=37.12 E-value=57 Score=29.16 Aligned_cols=31 Identities=6% Similarity=0.011 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEec
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~ 139 (402)
..+.....++++|+++|+.++|||.|.++..
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~~iav~~G 63 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLDAIAVGVG 63 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 4566667899999999999999999988765
No 277
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=37.01 E-value=60 Score=31.77 Aligned_cols=45 Identities=9% Similarity=-0.031 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCC-----CHHHHHHHHcCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMP-----GADVRLMRLLGLK 158 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p-----~~a~~i~~~LGl~ 158 (402)
..++.++||+++|+.+.|+|+|.+ |..| ...+ +.|..++.++..+
T Consensus 86 i~~~iqral~aa~~~p~dldaIAV-T~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 86 IPRLIQRALDAAGLSPKDLDAIAV-TRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHcCCCcccceeEEE-ecCCCceeehhhhHHHHHHHHHhccCC
Confidence 456789999999999999998776 4444 4332 4566667666555
No 278
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=35.73 E-value=81 Score=31.10 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCC-CccEEEEEec
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVS-KITHLIFSAF 139 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~-dId~li~~s~ 139 (402)
++..+|..+...+++++++++.+ |+|+|+=+|.
T Consensus 65 EsV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTG 98 (448)
T PF09887_consen 65 ESVAELVRDTLLESHKKAHLDIKKDLDFVVRSTG 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccccceEEEeecc
Confidence 46899999999999999999987 9999886654
No 279
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=35.41 E-value=77 Score=30.42 Aligned_cols=50 Identities=14% Similarity=-0.039 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCC-----CHHHHHHHHcCCC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP-----GADVRLMRLLGLK 158 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-----~~a~~i~~~LGl~ 158 (402)
-.+......+++|+++|++++|||.|.++..-+.... ..|..++..++++
T Consensus 48 H~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~~p 102 (305)
T TIGR00329 48 HAENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLDKP 102 (305)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhCCC
Confidence 4556667789999999999999999887654322111 3345555555554
No 280
>PRK09604 UGMP family protein; Validated
Probab=34.99 E-value=1e+02 Score=29.93 Aligned_cols=49 Identities=16% Similarity=-0.050 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCC------CHHHHHHHHcCCC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP------GADVRLMRLLGLK 158 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p------~~a~~i~~~LGl~ 158 (402)
-.+......+++|+++|++++|||.|.++.. |-.++ ..|..++..++++
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~G-PG~~tglrvg~~~Ak~La~~~~ip 105 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTAG-PGLVGALLVGVSFAKALALALNKP 105 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCcHHhHHHHHHHHHHHHHHhCCC
Confidence 4567777899999999999999999887654 31122 3355566666654
No 281
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=34.81 E-value=1.1e+02 Score=28.25 Aligned_cols=85 Identities=15% Similarity=0.080 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCC-HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCC
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPG-ADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNP 189 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~-~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~ 189 (402)
.....-.+++|++++++.+|||.+.+.-.-+...|- ....++.-|.+--.. -..--+.|-+-+. +. ++|..-.
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~k--Plv~VNHCigHIE---MG-R~iTgA~ 124 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNK--PLVGVNHCIGHIE---MG-REITGAQ 124 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCC--Ccccchhhhhhhh---hc-ceeccCC
Confidence 344455788999999999999988775443365562 233344444321111 1233456765442 11 2222112
Q ss_pred CCeEEEEEeccC
Q 044410 190 GARVLVVCSDIR 201 (402)
Q Consensus 190 ~~~vLvv~~e~~ 201 (402)
.-.||-|++-..
T Consensus 125 nPvvLYvSGGNT 136 (336)
T KOG2708|consen 125 NPVVLYVSGGNT 136 (336)
T ss_pred CCEEEEEeCCce
Confidence 345666655443
No 282
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=33.81 E-value=53 Score=30.80 Aligned_cols=31 Identities=10% Similarity=0.049 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEec
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~ 139 (402)
-.||...|++++++++|+.|.||+.|-+..|
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqvielhdc 300 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIELHDC 300 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEeecc
Confidence 4689999999999999999999998866555
No 283
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=33.66 E-value=97 Score=30.96 Aligned_cols=83 Identities=10% Similarity=0.004 Sum_probs=46.4
Q ss_pred HhHHHHHHHhhccCCCCCCcce-EEEEcC-CCH----H-HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 285 NYVDKCLSNAMSPIGISDWNSL-FYVVHP-GGD----G-LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~-~~~----~-~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
+...++++++|+++|+++ +|| .++... .+. . .-..+.+.+|+.. +... +. +.+++|-..+|..+
T Consensus 31 ~L~~~A~~~Al~dagl~~-~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~-~~~~------~V-~~~gasG~~al~~A 101 (392)
T PRK06065 31 ELAWEAASKALDEAGLEL-KDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIR-KPVS------RV-YVGGATGVMTAIAG 101 (392)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEeccCCcccccccHHHHHHHHcCCCC-CCeE------EE-ecCchhHHHHHHHH
Confidence 344578889999999997 888 554432 111 1 2334677787754 2221 12 12333334455555
Q ss_pred HHhhhhhhcccCCCCCceEEEEEEcc
Q 044410 358 RKKSIEEMKATTGEGLECGVLFGFGP 383 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~~G~ 383 (402)
... |+.|. .|.||++++.-
T Consensus 102 ~~~------I~sG~-ad~vLVvg~e~ 120 (392)
T PRK06065 102 WYH------VASGL-CQKVLAVAEEK 120 (392)
T ss_pred HHH------HhCCC-CCEEEEEEeec
Confidence 443 45552 37788777653
No 284
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=32.83 E-value=1.8e+02 Score=30.77 Aligned_cols=69 Identities=16% Similarity=0.076 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~ 184 (402)
+=..+..+++|.++++++.+||.|+.+..+. .+|.....+...+| + .+ .-.++..++-..-|...|..+
T Consensus 290 ~r~~~~~~~al~~a~l~~~~I~~VilvGGst-riP~V~~~v~~~f~-~-~~--~~~inpdeava~GAa~qa~~l 358 (579)
T COG0443 290 ERTIEPVEQALKDAGLEKSDIDLVILVGGST-RIPAVQELVKEFFG-K-EP--EKSINPDEAVALGAAIQAAVL 358 (579)
T ss_pred HHHHHHHHHHHHHcCCChhhCceEEEcccee-ccHHHHHHHHHHhC-c-cc--cccCCccHHHHHHHHHHHHhh
Confidence 3345567799999999999999999876544 57888899999999 3 22 345666666666665555444
No 285
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6.2.1.22 from EC), also known as citrate lyase ligase, is responsible for acetylation of the prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase. It converts the inactive thiol form of the enzyme to the active form. In Clostridium sphenoides, citrate lyase ligase actively degrades citrate. In Clostridium sporosphaeroides and Lactococcus lactis, however, the enzyme is under stringent regulatory control. The enzyme's activity in anaerobic bacteria is modulated by phosphorylation and dephosphorylation []. The proteins in this entry represent the C-terminal domain of citrate lyase ligase.; GO: 0008771 [citrate (pro-3S)-lyase] ligase activity
Probab=32.64 E-value=67 Score=28.31 Aligned_cols=89 Identities=20% Similarity=0.170 Sum_probs=48.2
Q ss_pred ecccccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCc
Q 044410 12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMC 91 (402)
Q Consensus 12 ~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~ 91 (402)
++.++..-.+. -||++-+++ |.+-+..++-..... .. -++.-...+|....||.+|++-.++..
T Consensus 56 ~L~NV~V~~~g-~YiIS~aTF-PsYFlK~~~~~~~~~--~~----lD~~iF~~~IAp~L~It~RfVG~EP~~-------- 119 (182)
T PF08218_consen 56 DLPNVTVHPGG-DYIISSATF-PSYFLKDEDDVIKAQ--AE----LDATIFKKYIAPALGITKRFVGEEPFS-------- 119 (182)
T ss_pred cCCCEEEEcCC-CeeeecccC-hhhhccchhHHHHHH--HH----HHHHHHHHHhhHhcCcccceeCCCCCC--------
Confidence 34444433433 488888777 888766665332221 00 012223456778899998877433221
Q ss_pred cCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc
Q 044410 92 CYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT 132 (402)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId 132 (402)
.....--++.++.|...|++...|.
T Consensus 120 ----------------~vT~~YN~~M~~~Lp~~gi~v~ei~ 144 (182)
T PF08218_consen 120 ----------------PVTRIYNEAMKEILPPYGIEVVEIP 144 (182)
T ss_pred ----------------HHHHHHHHHHHHhccccCCEEEEEe
Confidence 1344455566777777775443333
No 286
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=32.18 E-value=73 Score=31.94 Aligned_cols=22 Identities=14% Similarity=0.055 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEE
Q 044410 114 KEAALKAIKEWGQPVSKITHLI 135 (402)
Q Consensus 114 ~~Aa~~aL~~ag~~~~dId~li 135 (402)
.+++++||+++|++++|||.|.
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~ 305 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVN 305 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEE
Confidence 5799999999999999999764
No 287
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=31.47 E-value=1.4e+02 Score=30.35 Aligned_cols=49 Identities=8% Similarity=-0.007 Sum_probs=30.4
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEEcC---CC--HHHHHHHHHHcCCCccccH
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVVHP---GG--DGLLDQVEKTLGLRKEKLW 333 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~H~---~~--~~~~~~~~~~lgi~~ek~~ 333 (402)
.+....+++++|+++|+++ ++| .++.-+ .+ ..+.+.+.-..|++...-.
T Consensus 32 ~~L~~~a~~~al~~agl~~-~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~ 86 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDP-KLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDA 86 (430)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCch
Confidence 3445678889999999996 887 554422 11 2344444555799864433
No 288
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=31.25 E-value=86 Score=27.74 Aligned_cols=51 Identities=12% Similarity=0.205 Sum_probs=40.7
Q ss_pred HHHhHHHHHHHhhccCCCCCCcceEEEEcCC---------CHHHHHHHHHHcCCCccccHH
Q 044410 283 IGNYVDKCLSNAMSPIGISDWNSLFYVVHPG---------GDGLLDQVEKTLGLRKEKLWA 334 (402)
Q Consensus 283 ~~~~~~~~i~~~L~~~gl~~~~di~~i~H~~---------~~~~~~~~~~~lgi~~ek~~~ 334 (402)
....+...|...|++.|... +.++++||.. +..|+..+.+.++++.++.+.
T Consensus 68 ~f~~~~~~m~~~l~~~gv~i-d~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~ 127 (181)
T COG0241 68 DFDKLHNKMLKILASQGVKI-DGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYV 127 (181)
T ss_pred HHHHHHHHHHHHHHHcCCcc-ceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEE
Confidence 34455567788899999996 9999999975 467899999999988877664
No 289
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=31.08 E-value=80 Score=39.55 Aligned_cols=75 Identities=12% Similarity=-0.052 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcCCCC---------ccccceeeccccchHHHHHHHHH
Q 044410 113 GKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLGLKP---------SVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LGl~~---------~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
..++.++||+++|++|++||+|- ++|.|+..-|.-..-|.+-+|-.. .+. ....+..+++|+.+|.-+.
T Consensus 317 q~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvK-s~iGH~~~AAG~a~lik~~ 395 (2582)
T TIGR02813 317 QAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVK-SQIGHTKSTAGTAGMIKAV 395 (2582)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccc-cccccchHhHHHHHHHHHH
Confidence 46899999999999999999773 444444333333344555554321 111 2334556777777777666
Q ss_pred HHHHcC
Q 044410 183 DIAENN 188 (402)
Q Consensus 183 ~~i~~g 188 (402)
..++.+
T Consensus 396 lal~~~ 401 (2582)
T TIGR02813 396 LALHHK 401 (2582)
T ss_pred HHHhcC
Confidence 666665
No 290
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=29.19 E-value=79 Score=31.31 Aligned_cols=67 Identities=18% Similarity=0.072 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCC----------CHHHHHHHHcCCCCcc-ccceeeccccchH
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP----------GADVRLMRLLGLKPSV-NRLMIYTQGCYMG 174 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p----------~~a~~i~~~LGl~~~~-~~~~~i~~~C~~~ 174 (402)
...++..+|+++.|+++++++++||+|=....|-++.| +....|+++.|++-.. .|..|+-.|.-|.
T Consensus 65 ~lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H~P~~~~~~TlQiG~~~~iA~~tgi~vV~DFR~~Dia~GGqGA 142 (364)
T PF03702_consen 65 ELGELFADAVNQFLKKNGISPSDIDLIGSHGQTVFHRPEGQHPFTLQIGDPAVIAERTGITVVSDFRSADIAAGGQGA 142 (364)
T ss_dssp HHHHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEEECCCTTTEEEEES-HHHHHHHHSS-EEE--CHHHHHTTS-S-
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccEEEeCCcceecCcCCCCCceEecCCHHHHHHHHCcCEEeechHHHHhccCCCC
Confidence 46678899999999999999999998854444322222 3478899999987421 1244554444333
No 291
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=29.15 E-value=1.3e+02 Score=30.18 Aligned_cols=76 Identities=14% Similarity=-0.001 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-EEecCCCCCCCHHHHHHHHcCCCCc-cc----cceeeccccchHHHHHHHHHHH
Q 044410 111 KLGKEAALKAIKEWGQPVSKITHLI-FSAFYGVDMPGADVRLMRLLGLKPS-VN----RLMIYTQGCYMGGTVIRLAKDI 184 (402)
Q Consensus 111 ~la~~Aa~~aL~~ag~~~~dId~li-~~s~~~~~~p~~a~~i~~~LGl~~~-~~----~~~~i~~~C~~~~~al~~A~~~ 184 (402)
+-..+|.++||+++|+ +|||.|- +++.++..-+.-..-|.+.+|-... +. ....-+...++++..+..+...
T Consensus 274 ~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~ 351 (406)
T PRK08439 274 EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMA 351 (406)
T ss_pred HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHH
Confidence 3456899999999998 7999773 3444443333333445565553211 00 0122233444444444444455
Q ss_pred HHcC
Q 044410 185 AENN 188 (402)
Q Consensus 185 i~~g 188 (402)
++.+
T Consensus 352 l~~~ 355 (406)
T PRK08439 352 MRDG 355 (406)
T ss_pred HhCC
Confidence 5554
No 292
>PLN02666 5-oxoprolinase
Probab=28.82 E-value=1.5e+02 Score=34.50 Aligned_cols=59 Identities=10% Similarity=0.079 Sum_probs=46.5
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410 98 LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS 160 (402)
Q Consensus 98 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~ 160 (402)
.++..+...+.+..-..+|++......|.+|.|-.++.++. ..|..++.|+++||++..
T Consensus 456 ~e~aA~~i~~ia~~~m~~air~i~~~~G~dpr~~~l~afGG----agp~ha~~lA~~lgi~~v 514 (1275)
T PLN02666 456 VEEVALGFVRVANEAMCRPIRQLTEMKGYETANHALACFGG----AGPQHACAIARALGMSEV 514 (1275)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCceEEEecC----cHHHHHHHHHHHcCCCEE
Confidence 34445555566677778899999999999999999998887 456678899999999854
No 293
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=28.24 E-value=1e+02 Score=28.92 Aligned_cols=83 Identities=16% Similarity=0.200 Sum_probs=48.4
Q ss_pred HHhHHHHHHHhhccCCCCCCcce-EEEEcC-----CCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410 284 GNYVDKCLSNAMSPIGISDWNSL-FYVVHP-----GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV 357 (402)
Q Consensus 284 ~~~~~~~i~~~L~~~gl~~~~di-~~i~H~-----~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~ 357 (402)
.+....+++++|+++++++ ++| .+++-+ .+..+.+.+.-..|++.+.-..+ + |-.++|-..++..+
T Consensus 27 ~~L~~~a~~~al~~~~i~~-~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~---V----~~~CaSG~~Av~~a 98 (264)
T PF00108_consen 27 EDLAAEAVKAALERAGIDP-EDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATT---V----NRACASGLQAVHLA 98 (264)
T ss_dssp HHHHHHHHHHHHHHHTSHG-GGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEE---E----E-GGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccch-hhhhhcCcccccccccchhhhhhhhhhcccccccceee---e----hhhhhHHHHHHHHh
Confidence 4455678899999999997 888 665432 23445666777789986532222 2 33445555555555
Q ss_pred HHhhhhhhcccCCCCCceEEEEEE
Q 044410 358 RKKSIEEMKATTGEGLECGVLFGF 381 (402)
Q Consensus 358 ~~~~~~~g~i~~G~~~d~vll~~~ 381 (402)
... |+.|. .|.++..|+
T Consensus 99 ~~~------I~sG~-~dvvlagGv 115 (264)
T PF00108_consen 99 AMA------IASGE-ADVVLAGGV 115 (264)
T ss_dssp HHH------HHTTS--SEEEEEEE
T ss_pred hhh------hcCCC-ccEEEEecc
Confidence 554 55562 255555554
No 294
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=27.88 E-value=1.2e+02 Score=29.30 Aligned_cols=50 Identities=18% Similarity=0.004 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCC-----CHHHHHHHHcCCC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP-----GADVRLMRLLGLK 158 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p-----~~a~~i~~~LGl~ 158 (402)
-.+.....++++|++++++.+|||.|.++..-+.... +.|.-++..++++
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~~p 103 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALNKP 103 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCC
Confidence 4556667889999999999999999887654322111 3455566666655
No 295
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=25.74 E-value=98 Score=30.88 Aligned_cols=42 Identities=17% Similarity=0.049 Sum_probs=29.5
Q ss_pred HHHHHHHHHHcCCC--CCCccEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 044410 114 KEAALKAIKEWGQP--VSKITHLIFSAFYGVDMPGADVRLMRLLGLKP 159 (402)
Q Consensus 114 ~~Aa~~aL~~ag~~--~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~ 159 (402)
..|+++|++++|++ ++|||.+-+.-+ +....-...+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D~----Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDDR----YSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEecC----ChHHHHHHHHHcCCCC
Confidence 37999999999997 699998865432 2223345566777754
No 296
>COG4065 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.67 E-value=1.6e+02 Score=28.41 Aligned_cols=39 Identities=18% Similarity=0.270 Sum_probs=31.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCC-CccEEEEEecCC--CCCC
Q 044410 107 DEVPKLGKEAALKAIKEWGQPVS-KITHLIFSAFYG--VDMP 145 (402)
Q Consensus 107 ~~~~~la~~Aa~~aL~~ag~~~~-dId~li~~s~~~--~~~p 145 (402)
++.++|......+.|++++++.+ |+++|+-++.-. +..|
T Consensus 95 esVaelVk~tl~eslkkA~l~i~~Dl~FVVRSTGVtAGF~SP 136 (480)
T COG4065 95 ESVAELVKDTLLESLKKASLDIDTDLHFVVRSTGVTAGFASP 136 (480)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccccceEEEeecccccCCCCH
Confidence 46899999999999999999987 888887665432 4445
No 297
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=25.18 E-value=87 Score=30.31 Aligned_cols=45 Identities=22% Similarity=0.113 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCC------CHHHHHHHHcCCC
Q 044410 113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP------GADVRLMRLLGLK 158 (402)
Q Consensus 113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p------~~a~~i~~~LGl~ 158 (402)
....++++|+++|++++|||.|.++.. |-..+ ..+..++..++.+
T Consensus 49 l~~~i~~~l~~~~~~~~did~Iavt~g-Pg~~~~l~vg~~~ak~la~~~~~p 99 (322)
T TIGR03722 49 APKLIKEALEEAGVSLEDIDAVAFSQG-PGLGPCLRVGATAARALALKLNKP 99 (322)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecC-CchHHhHHHHHHHHHHHHHHhCCC
Confidence 344589999999999999999888654 31111 2356666666654
No 298
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=24.81 E-value=1.4e+02 Score=31.17 Aligned_cols=48 Identities=21% Similarity=0.111 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCC------CHHHHHHHHcCCC
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP------GADVRLMRLLGLK 158 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p------~~a~~i~~~LGl~ 158 (402)
...|. .+++++|+++|++++|||.|.++. .|-..+ +.|..++..++.+
T Consensus 49 ~~~l~-~~i~~~l~~~~~~~~~id~iav~~-gPg~~~~l~vg~~~ak~la~~~~~~ 102 (535)
T PRK09605 49 AEAIP-KVIKEALEEAGLKPEDIDLVAFSQ-GPGLGPCLRVVATAARALALSLDVP 102 (535)
T ss_pred HHHHH-HHHHHHHHHcCCCHhhCCEEEECC-CCCcHhhHHHHHHHHHHHHHHhCCC
Confidence 33343 789999999999999999887754 342222 2355566666765
No 299
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=24.77 E-value=1.2e+02 Score=24.81 Aligned_cols=37 Identities=11% Similarity=0.154 Sum_probs=26.9
Q ss_pred eCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcC
Q 044410 275 LSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHP 312 (402)
Q Consensus 275 ~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~ 312 (402)
..++-.+.+.+...+++.+.++++++++ +|| .++|..
T Consensus 10 v~~n~~e~I~~at~eLl~~i~~~N~l~~-~dIvSi~FT~ 47 (118)
T PF07736_consen 10 VEENTPEEILEATRELLEEILERNELSP-EDIVSIIFTV 47 (118)
T ss_dssp -SSSSHHHHHHHHHHHHHHHHHHTT--G-GGEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHcCCCH-HHEEEEEEEe
Confidence 3455667788888899999999999997 998 666554
No 300
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=24.17 E-value=1.6e+02 Score=28.87 Aligned_cols=48 Identities=15% Similarity=-0.056 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCC------CHHHHHHHHcCCC
Q 044410 110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP------GADVRLMRLLGLK 158 (402)
Q Consensus 110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p------~~a~~i~~~LGl~ 158 (402)
.+-....++++|+++|++++|||.|.++.. |-..+ +.|.-++..++.+
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~G-PGl~~~LrVG~~~Ak~LA~a~~~P 103 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKG-PGMGAPLSVGAVVARTLSLLWGKP 103 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCcHhhHHHHHHHHHHHHHHcCCC
Confidence 344456788999999999999998877543 42222 3455666666665
No 301
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family. Several related four-subunit enzymes may exist in the same species. This model describes a subfamily of beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes.
Probab=23.55 E-value=4e+02 Score=25.43 Aligned_cols=19 Identities=16% Similarity=-0.046 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHcCCCCCC
Q 044410 112 LGKEAALKAIKEWGQPVSK 130 (402)
Q Consensus 112 la~~Aa~~aL~~ag~~~~d 130 (402)
....|..+||++.+++++|
T Consensus 11 ~i~~~~~~a~~~l~~~p~d 29 (287)
T TIGR02177 11 GILSALQRALAELNLDPEQ 29 (287)
T ss_pred HHHHHHHHHHHHhcCCCCC
Confidence 3457788999999998876
No 302
>PF11392 DUF2877: Protein of unknown function (DUF2877); InterPro: IPR021530 This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.
Probab=23.39 E-value=1.5e+02 Score=23.74 Aligned_cols=21 Identities=10% Similarity=-0.029 Sum_probs=17.6
Q ss_pred HHHhcCCCCcchHHHHHHHHH
Q 044410 338 VLREYGNMGAPSVFFILDEVR 358 (402)
Q Consensus 338 ~l~~~Gn~~sasi~i~L~~~~ 358 (402)
.+-++||++..|.+..+...+
T Consensus 89 ~ll~iGhTSG~D~L~Gi~~~l 109 (110)
T PF11392_consen 89 RLLAIGHTSGADTLLGILLGL 109 (110)
T ss_pred HHHHcCCCchHHHHHHHHHHh
Confidence 477899999999999887654
No 303
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=21.78 E-value=2.9e+02 Score=26.59 Aligned_cols=115 Identities=13% Similarity=0.056 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCC-ccEEEEEecCCCCCCC----HHHHHHHHcC-CCCccccceeeccccchHHHHHHHHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSK-ITHLIFSAFYGVDMPG----ADVRLMRLLG-LKPSVNRLMIYTQGCYMGGTVIRLAK 182 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~d-Id~li~~s~~~~~~p~----~a~~i~~~LG-l~~~~~~~~~i~~~C~~~~~al~~A~ 182 (402)
..+=..++.++|++++|+++++ +..|.++=+-. .-+. +-..+.+++. +..+ ++ +++--.+.+ +.
T Consensus 45 ~~~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~-d~e~~~~~lv~~~R~~fps~ae~---~~-v~sDa~~sl-----~a 114 (336)
T KOG1794|consen 45 CASRIEDMIREAKEKAGWDKKGPLRSLGLGLSGT-DQEDKNRKLVTEFRDKFPSVAEN---FY-VTSDADGSL-----AA 114 (336)
T ss_pred HHHHHHHHHHHHHhhcCCCccCccceeeeecccC-CchhHHHHHHHHHHHhccchhhe---ee-eehhHHHHH-----hh
Confidence 4444556788999999999988 77776543221 1222 2233333332 1211 22 222111111 11
Q ss_pred HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCC
Q 044410 183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADS 235 (402)
Q Consensus 183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~ 235 (402)
. -..+....||+-+.+...+ ..+|+-....--....+.||+++|..+++..
T Consensus 115 ~-t~g~~~GiVLiaGTgs~cr-l~~~DGs~~~~ggwg~~iGd~GSaywia~~A 165 (336)
T KOG1794|consen 115 A-TPGGEGGIVLIAGTGSNCR-LVNPDGSEKGAGGWGHMIGDGGSAYWIARQA 165 (336)
T ss_pred c-CCCCCCcEEEEecCCceeE-EECCCCCccCCCCCCCccCCCcchhhhhhhh
Confidence 1 1123456777777776654 2234321111112345899999998887754
No 304
>PRK00035 hemH ferrochelatase; Reviewed
Probab=21.53 E-value=6e+02 Score=24.46 Aligned_cols=93 Identities=16% Similarity=0.009 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC----CC------CHHHHHHHHcCCC-CccccceeeccccchH--
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD----MP------GADVRLMRLLGLK-PSVNRLMIYTQGCYMG-- 174 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~----~p------~~a~~i~~~LGl~-~~~~~~~~i~~~C~~~-- 174 (402)
..+..++.+++++++.+-..++..+|+.++++| .. -| .++..+++++|++ .....+|....|...+
T Consensus 168 ~i~~l~~~I~~~~~~~~~~~~~~~llfs~HG~P~~~~~~gd~Y~~~~~~t~~~l~~~l~~~~~~~~~~fqs~~g~~~Wl~ 247 (333)
T PRK00035 168 YIEALAESIREALAKHGEDPEPDRLLFSAHGLPQRYIDKGDPYQQQCEETARLLAEALGLPDEDYDLTYQSRFGPEPWLE 247 (333)
T ss_pred HHHHHHHHHHHHHHhcCcccCCcEEEEecCCCchHHhhcCCChHHHHHHHHHHHHHHhCCCCCCeEEEeeCCCCCCccCC
Confidence 456666777777766543224566777788877 21 22 2567788899872 2222133222233333
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeccCc
Q 044410 175 GTVIRLAKDIAENNPGARVLVVCSDIRV 202 (402)
Q Consensus 175 ~~al~~A~~~i~~g~~~~vLvv~~e~~s 202 (402)
..--+....+.+.| .++|+|+.--..+
T Consensus 248 P~~~~~l~~l~~~g-~k~V~v~P~~Fv~ 274 (333)
T PRK00035 248 PYTDDTLEELAEKG-VKKVVVVPPGFVS 274 (333)
T ss_pred CCHHHHHHHHHHcC-CCeEEEECCeeec
Confidence 22233334444544 6888887643333
No 305
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=21.42 E-value=1.4e+02 Score=24.43 Aligned_cols=49 Identities=8% Similarity=0.099 Sum_probs=33.2
Q ss_pred CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCC---CHHHHHHHHHHc
Q 044410 276 SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPG---GDGLLDQVEKTL 325 (402)
Q Consensus 276 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~---~~~~~~~~~~~l 325 (402)
..+-.+.+.....++++++++++++++ +|| .++|.-. +..+--.+++.+
T Consensus 11 ~~nt~e~I~~at~eLl~~i~~~N~l~~-edivSv~FT~T~DL~a~FPA~aaR~~ 63 (117)
T cd02185 11 EENTAEEILEATRELLEEIIERNNIKP-EDIISVIFTVTPDLDAAFPAKAAREL 63 (117)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCH-HHEEEEEEEeCCcccccChHHHHHhc
Confidence 344566677888899999999999997 998 6655432 333334444544
No 306
>PF12244 DUF3606: Protein of unknown function (DUF3606); InterPro: IPR022037 This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=21.28 E-value=76 Score=22.26 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=27.6
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCC
Q 044410 307 FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMG 346 (402)
Q Consensus 307 ~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~ 346 (402)
.+-+++ ..-++.++++||++++++.. .++..||..
T Consensus 14 ~I~~~e--~~ev~ywa~~~gvt~~~L~~---AV~~vG~~~ 48 (57)
T PF12244_consen 14 RIDLSE--PYEVRYWAKRFGVTEEQLRE---AVRAVGNSR 48 (57)
T ss_pred hcCCCC--HHHHHHHHHHHCcCHHHHHH---HHHHHCcCH
Confidence 454454 46788999999999999875 499999973
No 307
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=21.09 E-value=2.6e+02 Score=22.91 Aligned_cols=45 Identities=20% Similarity=0.246 Sum_probs=27.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHc-CCCCcc
Q 044410 114 KEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLL-GLKPSV 161 (402)
Q Consensus 114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~L-Gl~~~~ 161 (402)
.+-.++.+++.+++++||-.++|+.+.- -.+|+.+ +.++ |+...+
T Consensus 23 ~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a---~R~~~g~~~Vp 70 (118)
T PF07736_consen 23 RELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAA---ARELPGWDDVP 70 (118)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHH---HHHTTTGTTSE
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHH---HHccCCCCccc
Confidence 3446677889999999999998854332 3667644 3445 877654
No 308
>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=21.06 E-value=1.6e+02 Score=30.73 Aligned_cols=90 Identities=20% Similarity=0.185 Sum_probs=56.0
Q ss_pred HHHHhhHHH---HHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHH
Q 044410 103 AMLIDEVPK---LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIR 179 (402)
Q Consensus 103 ~~~~~~~~~---la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~ 179 (402)
.+|++...+ =-.+-++++|++|++..+||+-|+..... ..+|-....|.+.+|-.+.. ...-..+-+.| .|++
T Consensus 323 ~efe~~v~~lI~Rti~p~~~aL~dA~~~~~di~EV~lvggm-trmpkv~s~V~e~fgk~p~~--~vnPdeava~G-Aaiq 398 (640)
T KOG0102|consen 323 GEFEELVPSLIARTIEPCKKALRDASLSSSDINEVILVGGM-TRMPKVQSTVKELFGKGPSK--GVNPDEAVAGG-AAIQ 398 (640)
T ss_pred HHHHHhhHHHHHhhhhHHHHHHHhccCChhhhhhhhhhcch-hhcHHHHHHHHHHhCCCCCC--CcCCcchhccc-hhhc
Confidence 344443333 34556889999999999999999887532 35787888899999876542 22222222222 2221
Q ss_pred HHHHHHHcCCCCeEEEEEec
Q 044410 180 LAKDIAENNPGARVLVVCSD 199 (402)
Q Consensus 180 ~A~~~i~~g~~~~vLvv~~e 199 (402)
.-+.+|..+.||++=.-
T Consensus 399 ---ggvl~geVkdvlLLdVt 415 (640)
T KOG0102|consen 399 ---GGVLSGEVKDVLLLDVT 415 (640)
T ss_pred ---cchhhccccceeeeecc
Confidence 22345778888877443
No 309
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=20.75 E-value=1.4e+02 Score=24.32 Aligned_cols=51 Identities=18% Similarity=0.232 Sum_probs=35.1
Q ss_pred CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCC---CHHHHHHHHHHc-CC
Q 044410 276 SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPG---GDGLLDQVEKTL-GL 327 (402)
Q Consensus 276 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~---~~~~~~~~~~~l-gi 327 (402)
..+..+.+.....+++.++++++++++ +|| .++|.-. +..+--.+++.+ |+
T Consensus 11 ~~nt~e~I~~at~eLl~~ii~~N~l~~-edivSv~FT~T~DL~a~FPA~aaR~~~Gw 66 (117)
T TIGR01796 11 ERNEAEEIGEAVAELLTELMERNELTP-EDLISVIFTVTEDLHADFPAAAARGLPGW 66 (117)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCH-HHEEEEEEEecCcccccChHHHHHhccCC
Confidence 345556677788899999999999997 998 6655432 333444555555 65
No 310
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=20.61 E-value=4.5e+02 Score=27.90 Aligned_cols=48 Identities=13% Similarity=0.128 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCC
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLK 158 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~ 158 (402)
...+=....++++|++++ +.+||.|+++..+. .+|.+...|.+.+|.+
T Consensus 288 ~l~~~~~~~i~~~L~~a~--~~~Id~ViLvGGss-riP~v~~~l~~~f~~~ 335 (595)
T PRK01433 288 PLVERTINIAQECLEQAG--NPNIDGVILVGGAT-RIPLIKDELYKAFKVD 335 (595)
T ss_pred HHHHHHHHHHHHHHhhcC--cccCcEEEEECCcc-cChhHHHHHHHHhCCC
Confidence 344445667888999998 67999999877655 5688889999999865
No 311
>COG0054 RibH Riboflavin synthase beta-chain [Coenzyme metabolism]
Probab=20.42 E-value=1.8e+02 Score=24.89 Aligned_cols=29 Identities=24% Similarity=0.316 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCccEEEE
Q 044410 108 EVPKLGKEAALKAIKEWGQPVSKITHLIF 136 (402)
Q Consensus 108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~ 136 (402)
...+...+.+.++|++.|.+.++|+.+-+
T Consensus 25 ~I~d~ll~gA~~~l~~~G~~~~~i~vv~V 53 (152)
T COG0054 25 DITDALLEGAVDALKRHGADVDNIDVVRV 53 (152)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccceEEEe
Confidence 47788889999999999988877876544
No 312
>COG3737 Uncharacterized conserved protein [Function unknown]
Probab=20.36 E-value=3.5e+02 Score=22.19 Aligned_cols=60 Identities=12% Similarity=0.002 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHH
Q 044410 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGG 175 (402)
Q Consensus 109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~ 175 (402)
.++|..+...+.|+.++ +|..|+++|... ...|..-.-....-|+.-. +.+.+.+|-++-
T Consensus 52 ~~~Lt~e~f~~vl~~a~----~~EilliGTG~~~rf~p~~l~aal~~~gIsve---~Mst~AA~RTYN 112 (127)
T COG3737 52 LSDLTPEDFERVLAEAP----DVEILLIGTGARLRFPPPKLRAALKAAGISVE---PMSTGAAVRTYN 112 (127)
T ss_pred hhhCCHHHHHHHHhcCC----CceEEEEecCccccCCCHHHHHHHHHcCCccc---cccchhhHHHHH
Confidence 67888888888888764 799999999887 4444332333344466544 234455555443
Done!