Query 044412
Match_columns 311
No_of_seqs 204 out of 2116
Neff 10.3
Searched_HMMs 13730
Date Mon Mar 25 04:42:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044412.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044412hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1w3ba_ a.118.8.1 (A:) O-GlcNA 99.2 1.9E-09 1.4E-13 91.2 23.6 170 136-310 169-371 (388)
2 d1w3ba_ a.118.8.1 (A:) O-GlcNA 98.9 8.4E-08 6.1E-12 80.7 18.1 248 19-291 30-388 (388)
3 d1fcha_ a.118.8.1 (A:) Peroxin 98.7 1.5E-07 1.1E-11 78.0 13.6 97 196-304 171-268 (323)
4 d1fcha_ a.118.8.1 (A:) Peroxin 98.3 8.5E-06 6.2E-10 67.0 15.9 226 33-295 28-304 (323)
5 d2onda1 a.118.8.7 (A:242-549) 98.2 7.3E-06 5.3E-10 67.4 12.3 158 27-225 102-269 (308)
6 d1hz4a_ a.118.8.2 (A:) Transcr 98.1 0.0002 1.4E-08 58.5 18.3 256 31-303 19-318 (366)
7 d2onda1 a.118.8.7 (A:242-549) 98.0 0.00021 1.5E-08 58.3 18.1 179 102-304 79-269 (308)
8 d1xnfa_ a.118.8.1 (A:) Lipopro 97.8 6.7E-05 4.9E-09 59.2 10.7 165 97-304 47-237 (259)
9 d2h6fa1 a.118.6.1 (A:55-369) P 97.8 0.0001 7.3E-09 60.6 11.9 218 29-302 48-283 (315)
10 d2h6fa1 a.118.6.1 (A:55-369) P 97.8 0.00018 1.3E-08 59.0 12.9 177 61-286 45-230 (315)
11 d1qqea_ a.118.8.1 (A:) Vesicul 97.6 0.0017 1.2E-07 52.2 16.7 139 136-302 117-266 (290)
12 d1hz4a_ a.118.8.2 (A:) Transcr 97.5 0.0064 4.7E-07 49.0 18.6 191 97-303 22-278 (366)
13 d2c2la1 a.118.8.1 (A:24-224) S 97.5 0.001 7.5E-08 49.9 12.4 98 195-304 2-100 (201)
14 d1elwa_ a.118.8.1 (A:) Hop {Hu 97.3 0.0011 7.9E-08 45.5 10.1 94 204-310 10-103 (117)
15 d1nzna_ a.118.8.1 (A:) Mitocho 97.3 0.00087 6.3E-08 46.5 9.2 97 201-310 3-104 (122)
16 d1hh8a_ a.118.8.1 (A:) Neutrop 97.2 0.0011 8.1E-08 49.9 9.9 147 71-244 16-167 (192)
17 d1hh8a_ a.118.8.1 (A:) Neutrop 97.2 0.00089 6.5E-08 50.4 9.2 115 97-256 15-144 (192)
18 d1elwa_ a.118.8.1 (A:) Hop {Hu 97.2 0.00088 6.4E-08 46.0 8.0 95 97-235 13-107 (117)
19 d1qqea_ a.118.8.1 (A:) Vesicul 97.1 0.0056 4.1E-07 48.9 13.6 139 138-305 39-187 (290)
20 d1a17a_ a.118.8.1 (A:) Protein 97.1 0.0021 1.5E-07 46.5 9.9 86 206-303 19-105 (159)
21 d1a17a_ a.118.8.1 (A:) Protein 97.0 0.0014 1E-07 47.5 7.9 92 97-232 20-111 (159)
22 d2c2la1 a.118.8.1 (A:24-224) S 96.9 0.002 1.4E-07 48.2 8.6 87 97-225 14-100 (201)
23 d1hxia_ a.118.8.1 (A:) Peroxin 96.9 0.0021 1.5E-07 43.6 7.8 88 203-303 22-111 (112)
24 d2ff4a2 a.118.8.3 (A:105-283) 96.8 0.0057 4.2E-07 45.2 10.2 71 136-234 67-143 (179)
25 d1dcea1 a.118.6.1 (A:1-241,A:3 96.7 0.0059 4.3E-07 49.7 10.6 228 40-304 45-304 (334)
26 d1hxia_ a.118.8.1 (A:) Peroxin 96.5 0.0015 1.1E-07 44.4 4.7 86 97-224 26-111 (112)
27 d1xnfa_ a.118.8.1 (A:) Lipopro 96.5 0.016 1.2E-06 44.8 11.3 93 199-304 39-133 (259)
28 d2ff4a2 a.118.8.3 (A:105-283) 96.2 0.027 2E-06 41.4 10.8 93 205-310 19-140 (179)
29 d1p5qa1 a.118.8.1 (A:258-427) 96.0 0.034 2.5E-06 40.3 10.3 94 200-304 16-124 (170)
30 d1b89a_ a.118.1.3 (A:) Clathri 96.0 0.29 2.1E-05 39.5 18.7 62 239-301 168-229 (336)
31 d2fbna1 a.118.8.1 (A:22-174) P 96.0 0.063 4.6E-06 38.0 11.4 96 199-304 19-129 (153)
32 d1nzna_ a.118.8.1 (A:) Mitocho 95.9 0.0027 2E-07 43.8 3.6 89 140-255 3-95 (122)
33 d1p5qa1 a.118.8.1 (A:258-427) 95.9 0.0067 4.9E-07 44.3 6.1 69 137-234 63-131 (170)
34 d2fbna1 a.118.8.1 (A:22-174) P 95.9 0.012 9E-07 42.0 7.4 75 136-239 67-141 (153)
35 d1elra_ a.118.8.1 (A:) Hop {Hu 95.9 0.054 4E-06 37.1 10.6 100 97-236 14-116 (128)
36 d2hr2a1 a.118.8.8 (A:2-157) Hy 95.9 0.072 5.3E-06 37.8 11.5 101 198-304 8-128 (156)
37 d1elra_ a.118.8.1 (A:) Hop {Hu 95.7 0.089 6.5E-06 35.9 11.1 97 201-304 8-107 (128)
38 d1dcea1 a.118.6.1 (A:1-241,A:3 95.5 0.0035 2.6E-07 51.1 3.3 194 40-257 89-301 (334)
39 d1ihga1 a.118.8.1 (A:197-365) 94.4 0.13 9.6E-06 36.8 9.0 90 202-304 32-139 (169)
40 d1b89a_ a.118.1.3 (A:) Clathri 94.2 1.1 7.8E-05 36.0 18.5 233 32-295 45-299 (336)
41 d1zbpa1 e.61.1.1 (A:2-265) Hyp 94.1 0.17 1.2E-05 39.5 9.7 110 98-226 7-128 (264)
42 d1kt1a1 a.118.8.1 (A:254-421) 94.1 0.43 3.1E-05 33.9 11.4 100 199-310 17-130 (168)
43 d1zbpa1 e.61.1.1 (A:2-265) Hyp 93.8 0.17 1.3E-05 39.4 9.2 27 279-305 102-128 (264)
44 d1ihga1 a.118.8.1 (A:197-365) 93.5 0.3 2.2E-05 34.7 9.6 60 196-256 76-135 (169)
45 d1wy6a1 a.118.20.1 (A:7-167) H 93.5 0.33 2.4E-05 32.9 8.6 113 195-308 32-152 (161)
46 d2hr2a1 a.118.8.8 (A:2-157) Hy 93.4 0.68 5E-05 32.3 11.3 107 137-272 8-134 (156)
47 d1tjca_ a.118.8.1 (A:) Prolyl 91.9 0.64 4.6E-05 29.4 8.6 66 237-310 10-78 (95)
48 d1kt1a1 a.118.8.1 (A:254-421) 91.8 1.4 0.00011 30.9 13.4 58 198-256 65-122 (168)
49 d1tjca_ a.118.8.1 (A:) Prolyl 91.0 0.78 5.7E-05 29.0 8.2 70 138-232 7-79 (95)
50 d1zu2a1 a.118.8.1 (A:1-145) Mi 89.4 0.51 3.7E-05 32.7 6.6 83 211-307 55-144 (145)
51 d1zu2a1 a.118.8.1 (A:1-145) Mi 88.1 0.3 2.2E-05 34.0 4.6 94 207-304 7-114 (145)
52 d1v54e_ a.118.11.1 (E:) Cytoch 81.7 1.7 0.00012 27.6 5.3 57 30-87 11-68 (105)
53 d1v54e_ a.118.11.1 (E:) Cytoch 72.0 7.8 0.00057 24.5 6.4 44 212-255 21-64 (105)
54 d1ya0a1 a.118.8.1 (A:1-497) SM 69.8 2.3 0.00017 35.9 4.8 48 196-244 185-232 (497)
55 d1ya0a1 a.118.8.1 (A:1-497) SM 63.4 8.3 0.0006 32.2 7.1 69 138-210 154-233 (497)
56 d1qpza1 a.35.1.5 (A:2-58) Puri 63.0 5.8 0.00043 22.2 4.0 38 25-62 12-51 (57)
57 d1wy6a1 a.118.20.1 (A:7-167) H 59.4 21 0.0015 23.8 7.4 61 196-257 85-145 (161)
58 d1klxa_ a.118.18.1 (A:) Cystei 57.4 21 0.0016 23.2 9.1 83 209-307 35-126 (133)
59 d2k0bx1 a.5.2.1 (X:1-52) Seque 56.7 9.6 0.0007 20.6 3.9 40 43-85 10-49 (52)
60 d2nsza1 a.118.1.14 (A:322-450) 54.9 25 0.0018 23.1 7.7 48 199-247 9-56 (129)
61 d1khda1 a.46.2.1 (A:12-80) Ant 54.8 16 0.0012 21.0 6.3 63 234-307 1-66 (69)
62 d1ouva_ a.118.18.1 (A:) Cystei 54.7 35 0.0025 24.8 16.9 96 196-307 141-249 (265)
63 d2hsga1 a.35.1.5 (A:2-58) Gluc 53.5 9.8 0.00071 21.2 3.9 37 25-61 13-51 (57)
64 d1ouva_ a.118.18.1 (A:) Cystei 51.8 39 0.0028 24.5 18.2 59 196-257 177-243 (265)
65 d2pqrb1 a.118.8.1 (B:5-128) Mi 50.0 30 0.0022 22.6 6.8 28 277-304 74-101 (124)
66 d1uoha_ d.211.1.1 (A:) 26S pro 46.6 19 0.0014 25.8 5.9 55 31-87 7-61 (223)
67 d1efaa1 a.35.1.5 (A:2-60) Lac 45.0 16 0.0011 20.5 3.9 37 25-61 14-52 (59)
68 d2qw6a1 a.80.1.2 (A:241-328) U 44.7 19 0.0014 22.0 4.4 39 209-248 12-50 (88)
69 d1mzba_ a.4.5.42 (A:) Ferric u 37.8 32 0.0023 22.6 5.4 49 28-77 19-68 (134)
70 d2f6ma1 a.2.17.1 (A:322-385) V 37.1 31 0.0022 19.6 4.2 47 199-246 3-49 (64)
71 d1u9pa1 a.43.1.1 (A:72-107) Ar 33.4 24 0.0017 16.7 3.3 25 128-152 12-36 (36)
72 d3bgea1 a.80.1.2 (A:251-434) U 32.4 60 0.0044 22.8 6.2 47 203-249 7-56 (184)
73 d1sxjc1 a.80.1.1 (C:239-333) R 32.2 28 0.0021 21.2 4.1 35 274-309 1-36 (95)
74 d1uoha_ d.211.1.1 (A:) 26S pro 30.1 70 0.0051 22.4 6.8 9 302-310 122-130 (223)
75 d2pqrb1 a.118.8.1 (B:5-128) Mi 30.0 57 0.0042 21.2 5.4 35 199-235 75-109 (124)
76 d1sxjd1 a.80.1.1 (D:263-353) R 30.0 53 0.0038 19.6 6.2 46 202-249 8-53 (91)
77 d1h6pa_ a.146.1.1 (A:) TRF2 {H 27.4 56 0.0041 23.1 5.2 57 102-165 86-142 (203)
78 d1mzba_ a.4.5.42 (A:) Ferric u 27.1 38 0.0028 22.1 4.3 49 201-249 19-68 (134)
79 d1jr3a1 a.80.1.1 (A:243-368) g 25.5 48 0.0035 21.2 4.5 35 198-233 5-39 (126)
80 d1us7b_ a.205.1.1 (B:) Hsp90 c 23.2 21 0.0015 25.7 2.3 33 71-118 162-194 (201)
81 d2fnaa1 a.4.5.11 (A:284-356) H 23.1 68 0.005 18.6 5.2 49 199-249 7-55 (73)
82 d1peqa1 a.98.1.1 (A:13-174) R1 23.0 37 0.0027 23.3 3.6 31 205-235 122-152 (162)
83 d1g2ha_ a.4.1.12 (A:) Transcri 22.0 63 0.0046 17.8 4.2 35 22-56 18-60 (61)
84 d1uxda_ a.35.1.5 (A:) Fructose 21.6 34 0.0025 18.9 2.6 35 26-60 13-52 (59)
85 d3ctda1 a.80.1.2 (A:258-420) U 21.1 1.2E+02 0.0087 20.6 7.3 46 203-248 5-53 (163)
86 d2r9ga1 a.80.1.2 (A:238-423) U 20.6 1.3E+02 0.0095 20.9 7.1 43 203-246 6-51 (186)
No 1
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=1.9e-09 Score=91.24 Aligned_cols=170 Identities=8% Similarity=0.048 Sum_probs=116.0
Q ss_pred hhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHH-----HHHHHhhCC---CCcHhHHHHHHHHH
Q 044412 136 VFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARL-----AELLFNKMP---AWDIRSWTTMITSY 207 (311)
Q Consensus 136 ~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~-----a~~~~~~m~---~~~~~~y~~li~~~ 207 (311)
...+..+...+...|+.++|.....+.... .+.+...|..+-..+... |...++... ..+...+..+-..+
T Consensus 169 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 247 (388)
T d1w3ba_ 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTL-DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVY 247 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHhhcccccccCcHHHHHHHHHHHHHh-CcccHHHHHHHhhhhhccccHHHHHHHHHHhHHHhhhHHHHHHHHHHHH
Confidence 455666667777778888844333333322 112334555555544443 555555433 23556677777778
Q ss_pred HhCCChhHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhccCChhhHHHHHHh---------------------hCChHHHH
Q 044412 208 SQNKQFREALDAFNKTKKSGTGS-DQVTMATVLSACAHLGALDLGRGIQIY---------------------CRSLGRSL 265 (311)
Q Consensus 208 ~~~g~~~~a~~~~~~m~~~g~~p-~~~t~~~li~a~~~~~~~~~a~~~~~~---------------------~~~~~~a~ 265 (311)
.+.|++++|++.|++..+. .| +..++..+-..+...|+.++|...++. .|+.++|.
T Consensus 248 ~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 325 (388)
T d1w3ba_ 248 YEQGLIDLAIDTYRRAIEL--QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAV 325 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHT--CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCccchhhhHHHHHHHHCCCHHHHH
Confidence 8888888888888887663 34 356777777788888888888777765 67888888
Q ss_pred HHHhhcC--CC-CchhHHHHHHHHHhcCChHHHHHHHHHHHHcCCCCC
Q 044412 266 LVFFKLR--EK-NLLCWNSITEALAIHGFAHEALGMFDRMTYENVRPN 310 (311)
Q Consensus 266 ~~~~~~~--~p-~~~~~~~li~~~~~~g~~~~a~~~~~~M~~~g~~P~ 310 (311)
..|++.. .| +..+|..+-..|...|++++|...|++..+ +.|+
T Consensus 326 ~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~--l~P~ 371 (388)
T d1w3ba_ 326 RLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR--ISPT 371 (388)
T ss_dssp HHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHT--TCTT
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCC
Confidence 8888765 44 456788899999999999999999999875 4565
No 2
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=8.4e-08 Score=80.75 Aligned_cols=248 Identities=8% Similarity=0.044 Sum_probs=158.8
Q ss_pred CCCchhhhHHHHHHHHhhccChhhHHHHHHHHHHhccCcchhHHHHHHHHHhhccCChhHHHHhcccCCCCCeee-----
Q 044412 19 PTSVSFIRIHIIANQLKKCSSIKELECVYATIVKTNANLDCFLAKQFISFCTSRFHFIDYTILVFPQMQEPNVFV----- 93 (311)
Q Consensus 19 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~m~~~g~~p~~~~~~~ll~~~~~~~g~~~~a~~~~~~m~~~~~~~----- 93 (311)
|+.+.. ...+..++...|+.+++...++..++.. +-+..++..+..++ .+.|++++|...+....+.+...
T Consensus 30 p~~~~~--~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~a~~~l~~~~-~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 105 (388)
T d1w3ba_ 30 PDNTGV--LLLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVY-KERGQLQEAIEHYRHALRLKPDFIDGYI 105 (388)
T ss_dssp TTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHh-hhhccccccccccccccccccccccccc
Confidence 554443 3456667777888889988888887764 23456788888888 88999999888876553100000
Q ss_pred ------------------------------------------------------------------eec----cccCCCh
Q 044412 94 ------------------------------------------------------------------YHA----FSSLRHP 103 (311)
Q Consensus 94 ------------------------------------------------------------------~~~----~~~~~~~ 103 (311)
+.. +...|+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 185 (388)
T d1w3ba_ 106 NLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEI 185 (388)
T ss_dssp HHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhHHHHHHhhccCcchhHHHHhhcccccccCcH
Confidence 000 2233344
Q ss_pred hHHHHHHHHHHHCCCCchHHHHHHHHhcCCC-chhHHHHHHHHHHhCCCCccchHHHHHHhccCC---CCCHhHHHHHHH
Q 044412 104 LQAIAFYLYMLRAEVLLTTVHGQVWKNGFSS-PVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMP---ERKFATWNTMID 179 (311)
Q Consensus 104 ~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~-~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~---~~~~~~~~~li~ 179 (311)
++|...++...+ ..| +...|..+...|...|++++ |...+.... ......+..+-.
T Consensus 186 ~~A~~~~~~al~----------------~~p~~~~~~~~l~~~~~~~~~~~~----A~~~~~~~~~~~~~~~~~~~~l~~ 245 (388)
T d1w3ba_ 186 WLAIHHFEKAVT----------------LDPNFLDAYINLGNVLKEARIFDR----AVAAYLRALSLSPNHAVVHGNLAC 245 (388)
T ss_dssp HHHHHHHHHHHH----------------HCTTCHHHHHHHHHHHHTTTCTTH----HHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHH----------------hCcccHHHHHHHhhhhhccccHHH----HHHHHHHhHHHhhhHHHHHHHHHH
Confidence 444444433322 233 35667777788888888888 444444332 223344555555
Q ss_pred HHHHH-----HHHHHhhCC--CC-cHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhH
Q 044412 180 AYARL-----AELLFNKMP--AW-DIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLG 251 (311)
Q Consensus 180 ~~~~~-----a~~~~~~m~--~~-~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a 251 (311)
.+.+. |...|++.. .| +..+|..+...+...|++++|++.++..... .+.+...+..+...+...|++++|
T Consensus 246 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A 324 (388)
T d1w3ba_ 246 VYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL-CPTHADSLNNLANIKREQGNIEEA 324 (388)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhcc-CCccchhhhHHHHHHHHCCCHHHH
Confidence 55443 666665432 23 4567777777888888888888888776654 345666777777778888888888
Q ss_pred HHHHHh---------------------hCChHHHHHHHhhcC--CCC-chhHHHHHHHHHhcCC
Q 044412 252 RGIQIY---------------------CRSLGRSLLVFFKLR--EKN-LLCWNSITEALAIHGF 291 (311)
Q Consensus 252 ~~~~~~---------------------~~~~~~a~~~~~~~~--~p~-~~~~~~li~~~~~~g~ 291 (311)
...++. .|+.++|...|++.. .|+ ...|..+-..|.+.||
T Consensus 325 ~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~lg~~~~~~~D 388 (388)
T d1w3ba_ 325 VRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD 388 (388)
T ss_dssp HHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 877776 777778888887754 454 5678888888877765
No 3
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.68 E-value=1.5e-07 Score=77.96 Aligned_cols=97 Identities=11% Similarity=0.043 Sum_probs=76.7
Q ss_pred cHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCC-
Q 044412 196 DIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREK- 274 (311)
Q Consensus 196 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p- 274 (311)
+...+..+-..+...|++++|+..|++..... +-+...|..+-.++...|++++|...++. +.++ .|
T Consensus 171 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~------al~~-----~p~ 238 (323)
T d1fcha_ 171 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR-PNDYLLWNKLGATLANGNQSEEAVAAYRR------ALEL-----QPG 238 (323)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHH------HHHH-----CTT
T ss_pred ccccchhhHHHHHHHHHHhhhhcccccccccc-cccccchhhhhhcccccccchhHHHHHHH------HHHH-----hhc
Confidence 56678888889999999999999999987642 22467788888899999999977666533 2221 34
Q ss_pred CchhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 275 NLLCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 275 ~~~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
+...|..+-..|.+.|++++|...|++..+
T Consensus 239 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 268 (323)
T d1fcha_ 239 YIRSRYNLGISCINLGAHREAVEHFLEALN 268 (323)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 466789999999999999999999998764
No 4
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.35 E-value=8.5e-06 Score=67.00 Aligned_cols=226 Identities=14% Similarity=0.076 Sum_probs=137.0
Q ss_pred HHhhccChhhHHHHHHHHHHhccCcchhHHHHHHHHHhhccCChhHHHHhcccCC--CCC-eeeeec----cccCCChhH
Q 044412 33 QLKKCSSIKELECVYATIVKTNANLDCFLAKQFISFCTSRFHFIDYTILVFPQMQ--EPN-VFVYHA----FSSLRHPLQ 105 (311)
Q Consensus 33 ~l~~~~~~~~~~~l~~~m~~~g~~p~~~~~~~ll~~~~~~~g~~~~a~~~~~~m~--~~~-~~~~~~----~~~~~~~~~ 105 (311)
.+-..|+.+++...++..++.. +-+..+|..+-.++ ...|+++.|...|++.. .|+ ...|.. +...|++++
T Consensus 28 ~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~-~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~ 105 (323)
T d1fcha_ 28 RRLQEGDLPNAVLLFEAAVQQD-PKHMEAWQYLGTTQ-AENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQ 105 (323)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH-HHcCChHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 4456677777777777766653 12455666666777 77777777777776643 232 122211 666777777
Q ss_pred HHHHHHHHHHCCCCch-----------------------------------HHHHHHHHhc-CCCchhHHHHHHHHHHhC
Q 044412 106 AIAFYLYMLRAEVLLT-----------------------------------TVHGQVWKNG-FSSPVFVQTAMVDNYSYS 149 (311)
Q Consensus 106 a~~~~~~m~~~~~~p~-----------------------------------~~~~~~~~~g-~~~~~~~~~~ll~~~~~~ 149 (311)
|.+.+++.....-... ..+...++.. -.++..++..+-..+...
T Consensus 106 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~ 185 (323)
T d1fcha_ 106 ACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLS 185 (323)
T ss_dssp HHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHT
T ss_pred cccchhhHHHhccchHHHHHhhhhhhhhcccccchhhHHHHHHhhHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHH
Confidence 7777776654221000 1111111111 123455666677777777
Q ss_pred CCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCC
Q 044412 150 NKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQFREALDAFNKTKKSGTG 229 (311)
Q Consensus 150 g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~ 229 (311)
|++++ |...++.... ....+...|..+-..|...|++++|++.|++..+. .
T Consensus 186 ~~~~~----A~~~~~~al~-----------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~ 236 (323)
T d1fcha_ 186 GEYDK----AVDCFTAALS-----------------------VRPNDYLLWNKLGATLANGNQSEEAVAAYRRALEL--Q 236 (323)
T ss_dssp TCHHH----HHHHHHHHHH-----------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--C
T ss_pred HHHhh----hhcccccccc-----------------------cccccccchhhhhhcccccccchhHHHHHHHHHHH--h
Confidence 77777 4444443111 01125678888999999999999999999998874 4
Q ss_pred C-CHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCC-------CCchhHHHHHHHHHhcCChHHH
Q 044412 230 S-DQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLRE-------KNLLCWNSITEALAIHGFAHEA 295 (311)
Q Consensus 230 p-~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~-------p~~~~~~~li~~~~~~g~~~~a 295 (311)
| +...|..+-.+|.+.|++++|...|+. |.++..+-.. -....|+.+=.++...|+.+.+
T Consensus 237 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~------al~l~p~~~~~~~~~~~~~~~~~~~l~~al~~~~~~d~~ 304 (323)
T d1fcha_ 237 PGYIRSRYNLGISCINLGAHREAVEHFLE------ALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAY 304 (323)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHH------HHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGH
T ss_pred hccHHHHHHHHHHHHHCCCHHHHHHHHHH------HHHhCCcChhhhhhhHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 5 466788899999999999988887744 3333322221 1123566666677767776544
No 5
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.21 E-value=7.3e-06 Score=67.36 Aligned_cols=158 Identities=13% Similarity=0.130 Sum_probs=90.6
Q ss_pred HHHHHHHHhhccChhhHHHHHHHHHHhccCcchhHHHHHHHHHhhccCChhHHHHhcccCCCCCeeeeec--------cc
Q 044412 27 IHIIANQLKKCSSIKELECVYATIVKTNANLDCFLAKQFISFCTSRFHFIDYTILVFPQMQEPNVFVYHA--------FS 98 (311)
Q Consensus 27 ~~~~~~~l~~~~~~~~~~~l~~~m~~~g~~p~~~~~~~ll~~~~~~~g~~~~a~~~~~~m~~~~~~~~~~--------~~ 98 (311)
...+..+....|+...++.+++.+++........+|...+..+ .+.|+++.|.++|+...+....++.. +.
T Consensus 102 ~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~-~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~~ 180 (308)
T d2onda1 102 YFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFA-RRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 180 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHH-HHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHH-HHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 3455666666777777777777766543333344667777777 77777777777776654322111111 33
Q ss_pred cCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHH
Q 044412 99 SLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMI 178 (311)
Q Consensus 99 ~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li 178 (311)
..|+.+.|.++|+..... .+.+...|...++.+.+.|+++. |+.+|++.....
T Consensus 181 ~~~~~~~a~~i~e~~l~~---------------~p~~~~~w~~y~~~~~~~g~~~~----aR~~fe~ai~~~-------- 233 (308)
T d2onda1 181 CSKDKSVAFKIFELGLKK---------------YGDIPEYVLAYIDYLSHLNEDNN----TRVLFERVLTSG-------- 233 (308)
T ss_dssp TSCCHHHHHHHHHHHHHH---------------HTTCHHHHHHHHHHHHTTCCHHH----HHHHHHHHHHSS--------
T ss_pred hccCHHHHHHHHHHHHHh---------------hhhhHHHHHHHHHHHHHcCChHH----HHHHHHHHHHhC--------
Confidence 446667777777666543 23445667777777777777777 555555421100
Q ss_pred HHHHHHHHHHHhhCCCC--cHhHHHHHHHHHHhCCChhHHHHHHHHHHh
Q 044412 179 DAYARLAELLFNKMPAW--DIRSWTTMITSYSQNKQFREALDAFNKTKK 225 (311)
Q Consensus 179 ~~~~~~a~~~~~~m~~~--~~~~y~~li~~~~~~g~~~~a~~~~~~m~~ 225 (311)
...| ....|...+.--...|+++.+.++++++.+
T Consensus 234 -------------~~~~~~~~~iw~~~~~fE~~~G~~~~~~~~~~r~~~ 269 (308)
T d2onda1 234 -------------SLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFT 269 (308)
T ss_dssp -------------SSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred -------------CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 0011 234566666655556777777777776654
No 6
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=98.06 E-value=0.0002 Score=58.50 Aligned_cols=256 Identities=9% Similarity=-0.094 Sum_probs=162.5
Q ss_pred HHHHhhccChhhHHHHHHHHHHhccCcc----hhHHHHHHHHHhhccCChhHHHHhcccCCC-----CCeee----e-ec
Q 044412 31 ANQLKKCSSIKELECVYATIVKTNANLD----CFLAKQFISFCTSRFHFIDYTILVFPQMQE-----PNVFV----Y-HA 96 (311)
Q Consensus 31 ~~~l~~~~~~~~~~~l~~~m~~~g~~p~----~~~~~~ll~~~~~~~g~~~~a~~~~~~m~~-----~~~~~----~-~~ 96 (311)
..+....|+++.+..+++...+..-..+ ...++.+-..+ ...|++++|...|++..+ ++... + +.
T Consensus 19 A~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~-~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 97 (366)
T d1hz4a_ 19 AQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVL-HCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQ 97 (366)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 3445677899999999988876532211 23566667788 899999999999987642 22111 1 11
Q ss_pred ---cccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCc---hhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCC
Q 044412 97 ---FSSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSP---VFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERK 170 (311)
Q Consensus 97 ---~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~---~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~ 170 (311)
+...|++..+...+.+..... ...+.... ...+..+-..+...|+++.+..............+
T Consensus 98 ~~~~~~~~~~~~a~~~~~~al~~~----------~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~ 167 (366)
T d1hz4a_ 98 SEILFAQGFLQTAWETQEKAFQLI----------NEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQ 167 (366)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH----------HHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----------HhcccchhhHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHhhhhh
Confidence 778889999999888764311 11111211 23555666788999999996555555544443322
Q ss_pred H----hHHHHHHHHHHHH------------HHHHHhhCCCC---cHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCC-
Q 044412 171 F----ATWNTMIDAYARL------------AELLFNKMPAW---DIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGS- 230 (311)
Q Consensus 171 ~----~~~~~li~~~~~~------------a~~~~~~m~~~---~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p- 230 (311)
. .++......+... +..++...... ....+..+...+...|++++|...+.+........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 247 (366)
T d1hz4a_ 168 PQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANN 247 (366)
T ss_dssp GGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTC
T ss_pred hhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccc
Confidence 1 2222222222221 44555554432 23356667777888999999999999876533222
Q ss_pred --CHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcC-CC-CchhHHHHHHHHHhcCChHHHHHHHHHHH
Q 044412 231 --DQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLR-EK-NLLCWNSITEALAIHGFAHEALGMFDRMT 303 (311)
Q Consensus 231 --~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~-~p-~~~~~~~li~~~~~~g~~~~a~~~~~~M~ 303 (311)
...++..+-.++...|+++.|...++. +....+... .| ....+..+-..|.+.|++++|.+.+++..
T Consensus 248 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~------al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al 318 (366)
T d1hz4a_ 248 HFLQGQWRNIARAQILLGEFEPAEIVLEE------LNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDAL 318 (366)
T ss_dssp GGGHHHHHHHHHHHHHTTCHHHHHHHHHH------HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHH------HHHHHhhcccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 244566778889999999988877643 333333333 12 24577888899999999999999998754
No 7
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.05 E-value=0.00021 Score=58.26 Aligned_cols=179 Identities=14% Similarity=0.060 Sum_probs=119.4
Q ss_pred ChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHH
Q 044412 102 HPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAY 181 (311)
Q Consensus 102 ~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~ 181 (311)
..++|..+|+.-.+.. .+.+...|...+..+-+.|+++.|+.+....+...+......|...+...
T Consensus 79 ~~~~a~~i~~ral~~~--------------~p~~~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~ 144 (308)
T d2onda1 79 FSDEAANIYERAISTL--------------LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFA 144 (308)
T ss_dssp HHHHHHHHHHHHHTTT--------------TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHc--------------CCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Confidence 3567777777665431 34456788888999999999999444444443333333334677766666
Q ss_pred HHH-----HHHHHhhCCC--C-cHhHHHHHHHH-HHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHH
Q 044412 182 ARL-----AELLFNKMPA--W-DIRSWTTMITS-YSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGR 252 (311)
Q Consensus 182 ~~~-----a~~~~~~m~~--~-~~~~y~~li~~-~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~ 252 (311)
.+. |.++|++... | +...|-..... +...|+.+.|..+|+...+. .+-+...|...+..+.+.|+.+.|+
T Consensus 145 ~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~-~p~~~~~w~~y~~~~~~~g~~~~aR 223 (308)
T d2onda1 145 RRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKK-YGDIPEYVLAYIDYLSHLNEDNNTR 223 (308)
T ss_dssp HHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHcCChHHHH
Confidence 554 8888887642 2 22333332222 33468999999999999875 3445778889999999999999777
Q ss_pred HHHHhhCChHHHHHHHhhcC-CC--CchhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 253 GIQIYCRSLGRSLLVFFKLR-EK--NLLCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 253 ~~~~~~~~~~~a~~~~~~~~-~p--~~~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
.+|+.. . .... .| ....|...+.--...|+.+.+.++++++.+
T Consensus 224 ~~fe~a------i---~~~~~~~~~~~~iw~~~~~fE~~~G~~~~~~~~~~r~~~ 269 (308)
T d2onda1 224 VLFERV------L---TSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFT 269 (308)
T ss_dssp HHHHHH------H---HSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHH------H---HhCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 776542 1 1111 12 234788888888899999999999998865
No 8
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=97.82 E-value=6.7e-05 Score=59.23 Aligned_cols=165 Identities=11% Similarity=-0.092 Sum_probs=96.0
Q ss_pred cccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHH
Q 044412 97 FSSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNT 176 (311)
Q Consensus 97 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~ 176 (311)
+.+.|++++|++.|++..+. -+-+..+|+.+-.+|.+.|++++ |...|++..+-+
T Consensus 47 y~~~g~~~~A~~~~~~al~l---------------~p~~~~a~~~lg~~~~~~g~~~~----A~~~~~~al~~~------ 101 (259)
T d1xnfa_ 47 YDSLGLRALARNDFSQALAI---------------RPDMPEVFNYLGIYLTQAGNFDA----AYEAFDSVLELD------ 101 (259)
T ss_dssp HHHTTCHHHHHHHHHHHHHH---------------CCCCHHHHHHHHHHHHHTTCHHH----HHHHHHHHHHHC------
T ss_pred HHHCCCHHHHHHHHHHhhcc---------------CCCCHHHHhhhchHHHHHHHHHH----hhhhhhHHHHHH------
Confidence 55677888888888877652 13347788899999999999999 555555432210
Q ss_pred HHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHH
Q 044412 177 MIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQI 256 (311)
Q Consensus 177 li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~ 256 (311)
..+..+|..+-..|...|++++|++.|++..+.. +.+......+..++.+.+..+....+..
T Consensus 102 -----------------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
T d1xnfa_ 102 -----------------PTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD-PNDPFRSLWLYLAEQKLDEKQAKEVLKQ 163 (259)
T ss_dssp -----------------TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred -----------------hhhhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhc-cccHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 1134456666677777777777777777766542 2233333333333333333333222222
Q ss_pred h-----------------hCCh------HHHHHHHhhcC--CC-CchhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 257 Y-----------------CRSL------GRSLLVFFKLR--EK-NLLCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 257 ~-----------------~~~~------~~a~~~~~~~~--~p-~~~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
. .+.. ..+...+..-. .| ...+|..+-..|...|++++|.+.|++...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 237 (259)
T d1xnfa_ 164 HFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVA 237 (259)
T ss_dssp HHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HhhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 2 1111 11111110000 12 224677788899999999999999999875
No 9
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.81 E-value=0.0001 Score=60.60 Aligned_cols=218 Identities=9% Similarity=0.005 Sum_probs=127.2
Q ss_pred HHHHHHhhccChhhHHHHHHHHHHhccCcchhHHHHHHHHHhhccC-ChhHHHHhcccCCC---CCeeeeec----cccC
Q 044412 29 IIANQLKKCSSIKELECVYATIVKTNANLDCFLAKQFISFCTSRFH-FIDYTILVFPQMQE---PNVFVYHA----FSSL 100 (311)
Q Consensus 29 ~~~~~l~~~~~~~~~~~l~~~m~~~g~~p~~~~~~~ll~~~~~~~g-~~~~a~~~~~~m~~---~~~~~~~~----~~~~ 100 (311)
.+..++...++.+++..+++.+++.. +-+...|+..-.++ ...| ++++|...++...+ .+..+|+. +.+.
T Consensus 48 ~~~~~~~~~e~~~~Al~~~~~ai~ln-P~~~~a~~~r~~~l-~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~~~~~~l 125 (315)
T d2h6fa1 48 YFRAVLQRDERSERAFKLTRDAIELN-AANYTVWHFRRVLL-KSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL 125 (315)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHC-CCChHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHhHHHHhh
Confidence 45566677777788888888877763 12334556555565 5554 47777777766542 22333333 6666
Q ss_pred CChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHH
Q 044412 101 RHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDA 180 (311)
Q Consensus 101 ~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~ 180 (311)
|++++|++.|+...+. -+-+...|..+...+.+.|++++ |...++...+.+
T Consensus 126 ~~~~eAl~~~~kal~~---------------dp~n~~a~~~~~~~~~~~~~~~~----Al~~~~~al~~~---------- 176 (315)
T d2h6fa1 126 RDPSQELEFIADILNQ---------------DAKNYHAWQHRQWVIQEFKLWDN----ELQYVDQLLKED---------- 176 (315)
T ss_dssp TCCTTHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCCTT----HHHHHHHHHHHC----------
T ss_pred ccHHHHHHHHhhhhhh---------------hhcchHHHHHHHHHHHHHHhhHH----HHHHHHHHHHHC----------
Confidence 7777777777777653 13446777777777777777777 444444422211
Q ss_pred HHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCC------hhHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhccCChhhHHH
Q 044412 181 YARLAELLFNKMPAWDIRSWTTMITSYSQNKQ------FREALDAFNKTKKSGTGS-DQVTMATVLSACAHLGALDLGRG 253 (311)
Q Consensus 181 ~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~------~~~a~~~~~~m~~~g~~p-~~~t~~~li~a~~~~~~~~~a~~ 253 (311)
..+...|+.+-..+.+.+. +++|++.+....+. .| +...|+-+-..+...| .+++..
T Consensus 177 -------------p~n~~a~~~r~~~l~~~~~~~~~~~~~~ai~~~~~al~~--~P~~~~~~~~l~~ll~~~~-~~~~~~ 240 (315)
T d2h6fa1 177 -------------VRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKL--VPHNESAWNYLKGILQDRG-LSKYPN 240 (315)
T ss_dssp -------------TTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHH--STTCHHHHHHHHHHHTTTC-GGGCHH
T ss_pred -------------CccHHHHHHHHHHHHHccccchhhhhHHhHHHHHHHHHh--CCCchHHHHHHHHHHHhcC-hHHHHH
Confidence 2356677776666666555 56788888887775 45 4566776665544433 454444
Q ss_pred HHHhhCChHHHHHHHhhcC-CCCchhHHHHHHHHHhc--CChHHHHHHHHHH
Q 044412 254 IQIYCRSLGRSLLVFFKLR-EKNLLCWNSITEALAIH--GFAHEALGMFDRM 302 (311)
Q Consensus 254 ~~~~~~~~~~a~~~~~~~~-~p~~~~~~~li~~~~~~--g~~~~a~~~~~~M 302 (311)
.++.. . +..+ ..+...+..+...|... ++.+.+...+++-
T Consensus 241 ~~~~~------~---~l~~~~~~~~~~~~l~~~y~~~~~~~~~~~~~~~~ka 283 (315)
T d2h6fa1 241 LLNQL------L---DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKA 283 (315)
T ss_dssp HHHHH------H---HHTTTCCCHHHHHHHHHHHHHHHHTTCSSHHHHHHHH
T ss_pred HHHHH------H---HhCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 33111 1 1111 12344566666766543 5556666666554
No 10
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.78 E-value=0.00018 Score=59.02 Aligned_cols=177 Identities=10% Similarity=0.060 Sum_probs=110.0
Q ss_pred HHHHHHHHHhhccCChhHHHHhcccCCC--CCe-eeeec----cccCC-ChhHHHHHHHHHHHCCCCchHHHHHHHHhcC
Q 044412 61 LAKQFISFCTSRFHFIDYTILVFPQMQE--PNV-FVYHA----FSSLR-HPLQAIAFYLYMLRAEVLLTTVHGQVWKNGF 132 (311)
Q Consensus 61 ~~~~ll~~~~~~~g~~~~a~~~~~~m~~--~~~-~~~~~----~~~~~-~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~ 132 (311)
.++.+-..+ .+.+..++|.+++++..+ |+. ..|+. +...+ ++++|++.++...+..
T Consensus 45 a~~~~~~~~-~~~e~~~~Al~~~~~ai~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~--------------- 108 (315)
T d2h6fa1 45 VYDYFRAVL-QRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ--------------- 108 (315)
T ss_dssp HHHHHHHHH-HHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC---------------
T ss_pred HHHHHHHHH-HhCCchHHHHHHHHHHHHHCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH---------------
Confidence 444454556 778888999888888763 333 23333 34434 5788999988876531
Q ss_pred CCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCC
Q 044412 133 SSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQ 212 (311)
Q Consensus 133 ~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~ 212 (311)
+-+..+|+.+-..+.+.|++++ |...++...+.+ ..+...|+.+...+...|+
T Consensus 109 p~~~~a~~~~~~~~~~l~~~~e----Al~~~~kal~~d-----------------------p~n~~a~~~~~~~~~~~~~ 161 (315)
T d2h6fa1 109 PKNYQVWHHRRVLVEWLRDPSQ----ELEFIADILNQD-----------------------AKNYHAWQHRQWVIQEFKL 161 (315)
T ss_dssp TTCHHHHHHHHHHHHHHTCCTT----HHHHHHHHHHHC-----------------------TTCHHHHHHHHHHHHHHTC
T ss_pred HhhhhHHHHHhHHHHhhccHHH----HHHHHhhhhhhh-----------------------hcchHHHHHHHHHHHHHHh
Confidence 3457888888888888999999 555555433211 2367788888888888899
Q ss_pred hhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCC-CchhHHHHHHHH
Q 044412 213 FREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREK-NLLCWNSITEAL 286 (311)
Q Consensus 213 ~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p-~~~~~~~li~~~ 286 (311)
+++|++.++...+.. +-+...|+.+-..+.+.+.......+.+.......|.++ .| +...|+.+...+
T Consensus 162 ~~~Al~~~~~al~~~-p~n~~a~~~r~~~l~~~~~~~~~~~~~~ai~~~~~al~~-----~P~~~~~~~~l~~ll 230 (315)
T d2h6fa1 162 WDNELQYVDQLLKED-VRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKL-----VPHNESAWNYLKGIL 230 (315)
T ss_dssp CTTHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHH-----STTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHC-CccHHHHHHHHHHHHHccccchhhhhHHhHHHHHHHHHh-----CCCchHHHHHHHHHH
Confidence 999999999988853 224556665555555555543333222223333344443 24 344555554433
No 11
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.64 E-value=0.0017 Score=52.20 Aligned_cols=139 Identities=11% Similarity=0.005 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHH-hCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCCC--cHhHHHHHHHHHHhCCC
Q 044412 136 VFVQTAMVDNYS-YSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPAW--DIRSWTTMITSYSQNKQ 212 (311)
Q Consensus 136 ~~~~~~ll~~~~-~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~~--~~~~y~~li~~~~~~g~ 212 (311)
..++..+...|- ..|++++ |...+.. |.+++.....+ -..+|..+...+...|+
T Consensus 117 ~~~~~~l~~~~~~~~~~~~~----A~~~~~~-------------------A~~l~~~~~~~~~~~~~~~~la~~~~~~g~ 173 (290)
T d1qqea_ 117 ANFKFELGEILENDLHDYAK----AIDCYEL-------------------AGEWYAQDQSVALSNKCFIKCADLKALDGQ 173 (290)
T ss_dssp HHHHHHHHHHHHHTTCCHHH----HHHHHHH-------------------HHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhHhhHHHHHHH----HHHHHHH-------------------HHHHHHhcCchhhhhhHHHHHHHHHHHcCh
Confidence 445666666664 4699999 6666655 33444444332 23468888999999999
Q ss_pred hhHHHHHHHHHHhcCCC-----CCH-HHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCCCchhHHHHHHHH
Q 044412 213 FREALDAFNKTKKSGTG-----SDQ-VTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREKNLLCWNSITEAL 286 (311)
Q Consensus 213 ~~~a~~~~~~m~~~g~~-----p~~-~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p~~~~~~~li~~~ 286 (311)
+++|+..|++....... +.. ..+......+...|+.+.|...++.....+....- .+.......++.++
T Consensus 174 y~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~A~~~~~~~~~~~~~~~~-----sre~~~l~~l~~a~ 248 (290)
T d1qqea_ 174 YIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFAD-----SRESNFLKSLIDAV 248 (290)
T ss_dssp HHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC--------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccchhhhhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCccc-----hHHHHHHHHHHHHH
Confidence 99999999998764211 111 12333444556678888776666654444322100 01122345555555
Q ss_pred Hh--cCChHHHHHHHHHH
Q 044412 287 AI--HGFAHEALGMFDRM 302 (311)
Q Consensus 287 ~~--~g~~~~a~~~~~~M 302 (311)
-. .+.+++|...|+++
T Consensus 249 ~~~d~e~~~eai~~y~~~ 266 (290)
T d1qqea_ 249 NEGDSEQLSEHCKEFDNF 266 (290)
T ss_dssp HTTCTTTHHHHHHHHTTS
T ss_pred HhcCHHHHHHHHHHHHHH
Confidence 44 23466666666543
No 12
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=97.48 E-value=0.0064 Score=48.96 Aligned_cols=191 Identities=11% Similarity=-0.004 Sum_probs=119.5
Q ss_pred cccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCc------hhHHHHHHHHHHhCCCCccchHHHHHHhccCCC-C
Q 044412 97 FSSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSP------VFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPE-R 169 (311)
Q Consensus 97 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~------~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~-~ 169 (311)
+...|++++|++++++..+. .|+ ...++.+-..|...|++++|.....+.....+. +
T Consensus 22 ~~~~g~~~~A~~~~~~aL~~----------------~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~ 85 (366)
T d1hz4a_ 22 AINDGNPDEAERLAKLALEE----------------LPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHD 85 (366)
T ss_dssp HHHTTCHHHHHHHHHHHHHT----------------CCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHHHHhh----------------CcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc
Confidence 44678889999998886553 222 245677778899999999944443333322111 1
Q ss_pred CH----hHHHHHHHHHHHH------------HHHHHhhCCCC----cHhHHHHHHHHHHhCCChhHHHHHHHHHHhc---
Q 044412 170 KF----ATWNTMIDAYARL------------AELLFNKMPAW----DIRSWTTMITSYSQNKQFREALDAFNKTKKS--- 226 (311)
Q Consensus 170 ~~----~~~~~li~~~~~~------------a~~~~~~m~~~----~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~--- 226 (311)
+. .++..+...+... +..+......+ ....+..+-..+...|+++.+...+......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~ 165 (366)
T d1hz4a_ 86 VWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 165 (366)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHhhh
Confidence 11 1222232333221 33444333322 1234556667788889999999999887653
Q ss_pred -CCCCCHHHHHHHHHHHhccCChhhHHHHHHh----------------------------hCChHHHHHHHhhcCC--C-
Q 044412 227 -GTGSDQVTMATVLSACAHLGALDLGRGIQIY----------------------------CRSLGRSLLVFFKLRE--K- 274 (311)
Q Consensus 227 -g~~p~~~t~~~li~a~~~~~~~~~a~~~~~~----------------------------~~~~~~a~~~~~~~~~--p- 274 (311)
+......++..+...+...++...+...+.. .++.+.|...+.+..+ |
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 245 (366)
T d1hz4a_ 166 YQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFA 245 (366)
T ss_dssp SCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCT
T ss_pred hhhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccc
Confidence 2223344555666666677777776666554 6778888888877652 1
Q ss_pred -C---chhHHHHHHHHHhcCChHHHHHHHHHHH
Q 044412 275 -N---LLCWNSITEALAIHGFAHEALGMFDRMT 303 (311)
Q Consensus 275 -~---~~~~~~li~~~~~~g~~~~a~~~~~~M~ 303 (311)
+ ...+..+...+...|++++|...+++..
T Consensus 246 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 278 (366)
T d1hz4a_ 246 NNHFLQGQWRNIARAQILLGEFEPAEIVLEELN 278 (366)
T ss_dssp TCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 1 2356667888999999999999998875
No 13
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.47 E-value=0.001 Score=49.90 Aligned_cols=98 Identities=7% Similarity=-0.045 Sum_probs=72.2
Q ss_pred CcHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCC
Q 044412 195 WDIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREK 274 (311)
Q Consensus 195 ~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p 274 (311)
|+....-..-..|.+.|++++|+..|.+..+.. +-+...|..+-.+|.+.|+++.|...|...-.+ .|
T Consensus 2 ~~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~-p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l-----------~p 69 (201)
T d2c2la1 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALEL-----------DG 69 (201)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS-----------CT
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHh-----------CC
Confidence 444455555677888999999999999887753 345667888888889988888655554332221 24
Q ss_pred -CchhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 275 -NLLCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 275 -~~~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
++..|..+-.+|...|++++|...|++..+
T Consensus 70 ~~~~a~~~lg~~~~~l~~~~~A~~~~~~al~ 100 (201)
T d2c2la1 70 QSVKAHFFLGQCQLEMESYDEAIANLQRAYS 100 (201)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 466888899999999999999999987653
No 14
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.34 E-value=0.0011 Score=45.47 Aligned_cols=94 Identities=14% Similarity=0.039 Sum_probs=71.6
Q ss_pred HHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCCCchhHHHHH
Q 044412 204 ITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREKNLLCWNSIT 283 (311)
Q Consensus 204 i~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p~~~~~~~li 283 (311)
-..+.+.|++++|+..|.+..+.. +-+...|..+-.++...|+++.|...+...-.. ...+...|..+-
T Consensus 10 g~~~~~~g~~~eAi~~~~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----------~p~~~~~~~~~g 78 (117)
T d1elwa_ 10 GNKALSVGNIDDALQCYSEAIKLD-PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL----------KPDWGKGYSRKA 78 (117)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------CTTCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcC-CcchhhhhcccccccccccccccchhhhhHHHh----------ccchhhHHHHHH
Confidence 345677899999999999998752 445677888888999989888666554321111 134678899999
Q ss_pred HHHHhcCChHHHHHHHHHHHHcCCCCC
Q 044412 284 EALAIHGFAHEALGMFDRMTYENVRPN 310 (311)
Q Consensus 284 ~~~~~~g~~~~a~~~~~~M~~~g~~P~ 310 (311)
.++...|++++|...|++..+ +.|+
T Consensus 79 ~~~~~~~~~~~A~~~~~~a~~--~~p~ 103 (117)
T d1elwa_ 79 AALEFLNRFEEAKRTYEEGLK--HEAN 103 (117)
T ss_dssp HHHHHTTCHHHHHHHHHHHHT--TCTT
T ss_pred HHHHHccCHHHHHHHHHHHHH--hCCC
Confidence 999999999999999999875 3454
No 15
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.30 E-value=0.00087 Score=46.46 Aligned_cols=97 Identities=9% Similarity=-0.013 Sum_probs=73.7
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCC--CCc--
Q 044412 201 TTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLRE--KNL-- 276 (311)
Q Consensus 201 ~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~--p~~-- 276 (311)
..+++.+...+++++|.+.|++..+.+ +.+..++..+-.++.+.++.+.. +.|..+|++..+ |+.
T Consensus 3 ~~l~n~~~~~~~l~~Ae~~Y~~aL~~~-p~~~~~~~n~a~~L~~s~~~~d~----------~~Ai~~l~~~l~~~~~~~~ 71 (122)
T d1nzna_ 3 EAVLNELVSVEDLLKFEKKFQSEKAAG-SVSKSTQFEYAWCLVRTRYNDDI----------RKGIVLLEELLPKGSKEEQ 71 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHTTSSSHHHH----------HHHHHHHHHHTTTSCHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHhccCCchH
Confidence 457788888999999999999988753 44667888888888876666532 256667776552 322
Q ss_pred -hhHHHHHHHHHhcCChHHHHHHHHHHHHcCCCCC
Q 044412 277 -LCWNSITEALAIHGFAHEALGMFDRMTYENVRPN 310 (311)
Q Consensus 277 -~~~~~li~~~~~~g~~~~a~~~~~~M~~~g~~P~ 310 (311)
..|..+-.+|.+.|++++|...|++..+ +.|+
T Consensus 72 ~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~--~~P~ 104 (122)
T d1nzna_ 72 RDYVFYLAVGNYRLKEYEKALKYVRGLLQ--TEPQ 104 (122)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTT
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHH--hCcC
Confidence 3677888899999999999999999987 4565
No 16
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.22 E-value=0.0011 Score=49.86 Aligned_cols=147 Identities=6% Similarity=0.085 Sum_probs=96.3
Q ss_pred hccCChhHHHHhcccCCCCCeeeeec----cccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHH
Q 044412 71 SRFHFIDYTILVFPQMQEPNVFVYHA----FSSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNY 146 (311)
Q Consensus 71 ~~~g~~~~a~~~~~~m~~~~~~~~~~----~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~ 146 (311)
...|+++.|.+.|+++.+++...|.- +...|++++|++.|++-.+.. +-+...|..+-.+|
T Consensus 16 ~~~~d~~~Al~~~~~i~~~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ld---------------p~~~~a~~~~g~~~ 80 (192)
T d1hh8a_ 16 ADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRD---------------KHLAVAYFQRGMLY 80 (192)
T ss_dssp HHTTCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHh---------------hhhhhhHHHHHHHH
Confidence 67899999999999998877655543 889999999999999976632 34577888899999
Q ss_pred HhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCCC-cHhHHHHHHHHHHhCCChhHHHHHHHHHHh
Q 044412 147 SYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPAW-DIRSWTTMITSYSQNKQFREALDAFNKTKK 225 (311)
Q Consensus 147 ~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~~-~~~~y~~li~~~~~~g~~~~a~~~~~~m~~ 225 (311)
.+.|++++|..-..+.+...+......|. .+...... ...++..+-.++.+.|++++|.+.|....+
T Consensus 81 ~~~g~~~~A~~~~~kAl~~~~~n~~~~~~------------~~~~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~ 148 (192)
T d1hh8a_ 81 YQTEKYDLAIKDLKEALIQLRGNQLIDYK------------ILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATS 148 (192)
T ss_dssp HHTTCHHHHHHHHHHHHHTTTTCSEEECG------------GGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HhhccHHHHHHHHHHHHHhCccCchHHHH------------HhhhhcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 99999999443333333222211100000 00000001 124556677788999999999999998887
Q ss_pred cCCCCCHHHHHHHHHHHhc
Q 044412 226 SGTGSDQVTMATVLSACAH 244 (311)
Q Consensus 226 ~g~~p~~~t~~~li~a~~~ 244 (311)
....|+.......+..+.+
T Consensus 149 ~~~~~~~~~~~~Al~~~~~ 167 (192)
T d1hh8a_ 149 MKSEPRHSKIDKAMECVWK 167 (192)
T ss_dssp TCCSGGGGHHHHHHHHHHT
T ss_pred cCCCcchHHHHHHHHHHHh
Confidence 6555544444444444433
No 17
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.21 E-value=0.00089 Score=50.42 Aligned_cols=115 Identities=8% Similarity=-0.040 Sum_probs=83.6
Q ss_pred cccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHH
Q 044412 97 FSSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNT 176 (311)
Q Consensus 97 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~ 176 (311)
+...|++++|++.|+++ ..|+..+|..+-.+|.+.|++++ |.+.|++..+.
T Consensus 15 ~~~~~d~~~Al~~~~~i------------------~~~~~~~~~nlG~~~~~~g~~~~----A~~~~~kAl~l------- 65 (192)
T d1hh8a_ 15 AADKKDWKGALDAFSAV------------------QDPHSRICFNIGCMYTILKNMTE----AEKAFTRSINR------- 65 (192)
T ss_dssp HHHTTCHHHHHHHHHTS------------------SSCCHHHHHHHHHHHHHTTCHHH----HHHHHHHHHHH-------
T ss_pred HHHCCCHHHHHHHHHhc------------------CCCCHHHHHHHHHHHHHcCCchh----HHHHHHHHHHH-------
Confidence 45778999999999765 46778888899999999999999 77766653321
Q ss_pred HHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCChhHHHHHHHHHHhcC------------C--CCC-HHHHHHHHHH
Q 044412 177 MIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQFREALDAFNKTKKSG------------T--GSD-QVTMATVLSA 241 (311)
Q Consensus 177 li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g------------~--~p~-~~t~~~li~a 241 (311)
...+...|+.+-.+|.+.|++++|++.|++-.... . +++ ..++..+-.+
T Consensus 66 ----------------dp~~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e~~~n~a~~ 129 (192)
T d1hh8a_ 66 ----------------DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFM 129 (192)
T ss_dssp ----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHH
T ss_pred ----------------hhhhhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhhcccchHHHHHHHHHH
Confidence 12357789999999999999999999999875421 1 111 2445555666
Q ss_pred HhccCChhhHHHHHH
Q 044412 242 CAHLGALDLGRGIQI 256 (311)
Q Consensus 242 ~~~~~~~~~a~~~~~ 256 (311)
+.+.|+++.|...+.
T Consensus 130 ~~~~~~~~~A~~~l~ 144 (192)
T d1hh8a_ 130 YAKKEEWKKAEEQLA 144 (192)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHH
Confidence 777788886665543
No 18
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.16 E-value=0.00088 Score=45.96 Aligned_cols=95 Identities=9% Similarity=0.066 Sum_probs=70.5
Q ss_pred cccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHH
Q 044412 97 FSSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNT 176 (311)
Q Consensus 97 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~ 176 (311)
+.+.|++++|+..|++..+. -+-+...|..+-.+|.+.|++++|........+.
T Consensus 13 ~~~~g~~~eAi~~~~~al~~---------------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----------- 66 (117)
T d1elwa_ 13 ALSVGNIDDALQCYSEAIKL---------------DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL----------- 66 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----------
T ss_pred HHHcCCHHHHHHHHHHHHhc---------------CCcchhhhhcccccccccccccccchhhhhHHHh-----------
Confidence 45778999999999988664 2455778888888999999999944443333332
Q ss_pred HHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHH
Q 044412 177 MIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTM 235 (311)
Q Consensus 177 li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~ 235 (311)
...+...|..+-.++...|++++|+..|++-.+ ..|+...+
T Consensus 67 ----------------~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~--~~p~~~~~ 107 (117)
T d1elwa_ 67 ----------------KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLK--HEANNPQL 107 (117)
T ss_dssp ----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TCTTCHHH
T ss_pred ----------------ccchhhHHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCCHHH
Confidence 123677888899999999999999999999886 45655443
No 19
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.10 E-value=0.0056 Score=48.92 Aligned_cols=139 Identities=10% Similarity=0.048 Sum_probs=97.2
Q ss_pred HHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCCCc--HhHHHHHHHHHHhCCChhH
Q 044412 138 VQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPAWD--IRSWTTMITSYSQNKQFRE 215 (311)
Q Consensus 138 ~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~~~--~~~y~~li~~~~~~g~~~~ 215 (311)
.|...-+.|-..|++++ |.+.|.+ |.++......+. ..+|+.+-.+|.+.|++++
T Consensus 39 ~y~~aa~~y~~~~~~~~----A~~~y~k-------------------A~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~ 95 (290)
T d1qqea_ 39 LCVQAATIYRLRKELNL----AGDSFLK-------------------AADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVN 95 (290)
T ss_dssp HHHHHHHHHHHTTCTHH----HHHHHHH-------------------HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHCcCHHH----HHHHHHH-------------------HHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHH
Confidence 46666778889999999 7777666 445555554432 4578999999999999999
Q ss_pred HHHHHHHHHh----cCC-CCCHHHHHHHHHHHh-ccCChhhHHHHHHhhCChHHHHHHHhhcCCCC--chhHHHHHHHHH
Q 044412 216 ALDAFNKTKK----SGT-GSDQVTMATVLSACA-HLGALDLGRGIQIYCRSLGRSLLVFFKLREKN--LLCWNSITEALA 287 (311)
Q Consensus 216 a~~~~~~m~~----~g~-~p~~~t~~~li~a~~-~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p~--~~~~~~li~~~~ 287 (311)
|.+.+++..+ .|- .....++..+...|. ..|+++.|...+.. |.+++.....+. ..+|..+...+.
T Consensus 96 A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~------A~~l~~~~~~~~~~~~~~~~la~~~~ 169 (290)
T d1qqea_ 96 AVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYEL------AGEWYAQDQSVALSNKCFIKCADLKA 169 (290)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH------HHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHH------HHHHHHhcCchhhhhhHHHHHHHHHH
Confidence 9999987554 221 111345556666664 46889988877643 444443333221 346888999999
Q ss_pred hcCChHHHHHHHHHHHHc
Q 044412 288 IHGFAHEALGMFDRMTYE 305 (311)
Q Consensus 288 ~~g~~~~a~~~~~~M~~~ 305 (311)
..|++++|..+|++....
T Consensus 170 ~~g~y~~A~~~~~~~~~~ 187 (290)
T d1qqea_ 170 LDGQYIEASDIYSKLIKS 187 (290)
T ss_dssp HTTCHHHHHHHHHHHHHT
T ss_pred HcChHHHHHHHHHHHHHh
Confidence 999999999999997753
No 20
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.08 E-value=0.0021 Score=46.48 Aligned_cols=86 Identities=12% Similarity=0.147 Sum_probs=37.6
Q ss_pred HHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCC-CchhHHHHHH
Q 044412 206 SYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREK-NLLCWNSITE 284 (311)
Q Consensus 206 ~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p-~~~~~~~li~ 284 (311)
.|.+.|++++|+..|.+..+.. +-+...|..+-.+|...|+++.|...|+. |.++ .| +...|..+..
T Consensus 19 ~~~~~~~y~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~k------al~~-----~p~~~~a~~~~g~ 86 (159)
T d1a17a_ 19 DYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATR------AIEL-----DKKYIKGYYRRAA 86 (159)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHH------HHHH-----CTTCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHhhhccccc-hhhhhhhhhhHHHHHhccccchHHHHHHH------HHHH-----cccchHHHHHHHH
Confidence 3444555555555555554432 12333444444455555555433333211 1110 12 2344555555
Q ss_pred HHHhcCChHHHHHHHHHHH
Q 044412 285 ALAIHGFAHEALGMFDRMT 303 (311)
Q Consensus 285 ~~~~~g~~~~a~~~~~~M~ 303 (311)
++...|++++|...+++..
T Consensus 87 ~~~~~g~~~eA~~~~~~a~ 105 (159)
T d1a17a_ 87 SNMALGKFRAALRDYETVV 105 (159)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHH
Confidence 5555555555555554444
No 21
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.97 E-value=0.0014 Score=47.53 Aligned_cols=92 Identities=15% Similarity=0.081 Sum_probs=71.6
Q ss_pred cccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHH
Q 044412 97 FSSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNT 176 (311)
Q Consensus 97 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~ 176 (311)
+.+.|++++|+..|++..+.. +-+...|..+-.+|...|++++ |...|+...+.
T Consensus 20 ~~~~~~y~~A~~~~~~al~~~---------------p~~~~~~~~lg~~~~~~~~~~~----A~~~~~kal~~------- 73 (159)
T d1a17a_ 20 YFKAKDYENAIKFYSQAIELN---------------PSNAIYYGNRSLAYLRTECYGY----ALGDATRAIEL------- 73 (159)
T ss_dssp HHHTTCHHHHHHHHHHHHHHS---------------TTCHHHHHHHHHHHHHTTCHHH----HHHHHHHHHHH-------
T ss_pred HHHcCCHHHHHHHhhhccccc---------------hhhhhhhhhhHHHHHhccccch----HHHHHHHHHHH-------
Confidence 557899999999999887642 4457888889999999999999 66666553221
Q ss_pred HHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCH
Q 044412 177 MIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQ 232 (311)
Q Consensus 177 li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~ 232 (311)
...+...|..+..+|...|++++|++.|++..+. .|+.
T Consensus 74 ----------------~p~~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~--~p~~ 111 (159)
T d1a17a_ 74 ----------------DKKYIKGYYRRAASNMALGKFRAALRDYETVVKV--KPHD 111 (159)
T ss_dssp ----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTC
T ss_pred ----------------cccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--CCCC
Confidence 1235678999999999999999999999999875 4553
No 22
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.91 E-value=0.002 Score=48.25 Aligned_cols=87 Identities=10% Similarity=-0.034 Sum_probs=68.8
Q ss_pred cccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHH
Q 044412 97 FSSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNT 176 (311)
Q Consensus 97 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~ 176 (311)
+.+.|++++|+..|++..+. -+-+...|+.+-.+|.+.|++++ |...|+...+-+
T Consensus 14 ~~~~g~~~~Ai~~~~kal~~---------------~p~~~~~~~~lg~~y~~~~~~~~----Ai~~~~~al~l~------ 68 (201)
T d2c2la1 14 LFVGRKYPEAAACYGRAITR---------------NPLVAVYYTNRALCYLKMQQPEQ----ALADCRRALELD------ 68 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHH---------------CSCCHHHHHHHHHHHHHTTCHHH----HHHHHHHHTTSC------
T ss_pred HHHcCCHHHHHHHHHHHHHh---------------CCCCHHHHHhHHHHHhhhhhhhh----hhHHHHHHHHhC------
Confidence 56789999999999887653 24567889999999999999999 666666544321
Q ss_pred HHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCChhHHHHHHHHHHh
Q 044412 177 MIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQFREALDAFNKTKK 225 (311)
Q Consensus 177 li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~ 225 (311)
..+..+|..+-.+|...|++++|+..|++..+
T Consensus 69 -----------------p~~~~a~~~lg~~~~~l~~~~~A~~~~~~al~ 100 (201)
T d2c2la1 69 -----------------GQSVKAHFFLGQCQLEMESYDEAIANLQRAYS 100 (201)
T ss_dssp -----------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----------------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 12577888999999999999999999998764
No 23
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=96.90 E-value=0.0021 Score=43.62 Aligned_cols=88 Identities=11% Similarity=-0.030 Sum_probs=70.0
Q ss_pred HHHHHHhCCChhHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCC-CchhHH
Q 044412 203 MITSYSQNKQFREALDAFNKTKKSGTGS-DQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREK-NLLCWN 280 (311)
Q Consensus 203 li~~~~~~g~~~~a~~~~~~m~~~g~~p-~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p-~~~~~~ 280 (311)
+-..+-+.|++++|+..|++..+. .| +...|..+-.++.+.|++++|...++. |.++ .| +...|.
T Consensus 22 ~g~~~~~~g~~~~A~~~~~~al~~--~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~------al~~-----~p~~~~a~~ 88 (112)
T d1hxia_ 22 EGLSMLKLANLAEAALAFEAVCQK--EPEREEAWRSLGLTQAENEKDGLAIIALNH------ARML-----DPKDIAVHA 88 (112)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHTTCHHHHHHHHHH------HHHH-----CTTCHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHhhhccc--ccccchhhhhhhhhhhhhhhHHHhhccccc------cccc-----ccccccchH
Confidence 445677889999999999999875 45 577888888999999999977766533 2222 34 577899
Q ss_pred HHHHHHHhcCChHHHHHHHHHHH
Q 044412 281 SITEALAIHGFAHEALGMFDRMT 303 (311)
Q Consensus 281 ~li~~~~~~g~~~~a~~~~~~M~ 303 (311)
.+-..|...|++++|.+.+++..
T Consensus 89 ~la~~y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 89 ALAVSHTNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHh
Confidence 99999999999999999998753
No 24
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.80 E-value=0.0057 Score=45.24 Aligned_cols=71 Identities=21% Similarity=0.201 Sum_probs=57.1
Q ss_pred hhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCCC-cHhHHHHHHHHHHhCCChh
Q 044412 136 VFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPAW-DIRSWTTMITSYSQNKQFR 214 (311)
Q Consensus 136 ~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~~-~~~~y~~li~~~~~~g~~~ 214 (311)
...+..+..++.+.|++++|...+.+.+.. +| +...|..++.+|.+.|+..
T Consensus 67 ~~a~~~la~~~~~~g~~~~Al~~~~~al~~----------------------------~P~~e~~~~~l~~al~~~Gr~~ 118 (179)
T d2ff4a2 67 VLAHTAKAEAEIACGRASAVIAELEALTFE----------------------------HPYREPLWTQLITAYYLSDRQS 118 (179)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------------------STTCHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHh----------------------------CCccHHHHHHHHHHHHHhcCHH
Confidence 356778899999999999955554444443 23 6789999999999999999
Q ss_pred HHHHHHHHHHh-----cCCCCCHHH
Q 044412 215 EALDAFNKTKK-----SGTGSDQVT 234 (311)
Q Consensus 215 ~a~~~~~~m~~-----~g~~p~~~t 234 (311)
+|++.|++..+ -|+.|...|
T Consensus 119 eAl~~y~~~~~~L~~eLG~~P~~~l 143 (179)
T d2ff4a2 119 DALGAYRRVKTTLADDLGIDPGPTL 143 (179)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCcCHHH
Confidence 99999999744 599999876
No 25
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.69 E-value=0.0059 Score=49.70 Aligned_cols=228 Identities=11% Similarity=-0.003 Sum_probs=111.1
Q ss_pred hhhHHHHHHHHHHhccCcchhH-HHH---HHHHHhhc-------cCChhHHHHhcccCCC--C-Ceeeeec------ccc
Q 044412 40 IKELECVYATIVKTNANLDCFL-AKQ---FISFCTSR-------FHFIDYTILVFPQMQE--P-NVFVYHA------FSS 99 (311)
Q Consensus 40 ~~~~~~l~~~m~~~g~~p~~~~-~~~---ll~~~~~~-------~g~~~~a~~~~~~m~~--~-~~~~~~~------~~~ 99 (311)
.+.+..++...++. .|+..+ |+. ++... .. .|.+++|+.+++...+ | +...|.. ...
T Consensus 45 ~~~al~~~~~~l~~--~P~~~~a~~~r~~~l~~l-~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~~~~~ 121 (334)
T d1dcea1 45 DESVLELTSQILGA--NPDFATLWNCRREVLQHL-ETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLP 121 (334)
T ss_dssp SHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHH-HTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCS
T ss_pred cHHHHHHHHHHHHH--CCCcHHHHHHHHHHHHHH-hhhcchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhhHHHHHhc
Confidence 35566677766654 355433 322 22222 22 2335666666666532 2 2222222 333
Q ss_pred CCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHH-HHHHhCCCCccchHHHHHHhccCCCC---CHhHHH
Q 044412 100 LRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMV-DNYSYSNKFFESRRVSRRLFDEMPER---KFATWN 175 (311)
Q Consensus 100 ~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll-~~~~~~g~~~~a~~~a~~~~~~~~~~---~~~~~~ 175 (311)
.++.++|+..++...+. -+++...+...+ ..+...|..++ |...++...+. +...|+
T Consensus 122 ~~~~~~a~~~~~~al~~---------------~~~~~~~~~~~~~~~~~~~~~~~~----Al~~~~~~i~~~p~~~~a~~ 182 (334)
T d1dcea1 122 EPNWARELELCARFLEA---------------DERNFHCWDYRRFVAAQAAVAPAE----ELAFTDSLITRNFSNYSSWH 182 (334)
T ss_dssp SCCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTCCCHHH----HHHHHHTTTTTTCCCHHHHH
T ss_pred cccHHHHHHHHHHHHhh---------------CchhhhhhhhHHHHHHHhccccHH----HHHHHHHHHHcCCCCHHHHH
Confidence 44567777777776543 133444444333 45556677777 66666555442 233343
Q ss_pred HHHHHHHHH-----HHHHHhhCCCCcHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhh
Q 044412 176 TMIDAYARL-----AELLFNKMPAWDIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDL 250 (311)
Q Consensus 176 ~li~~~~~~-----a~~~~~~m~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~ 250 (311)
.+-..+.+. |...+.....-.. ........+...+..+++...+....... +++..++..+...+...+
T Consensus 183 ~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~a~~~~~~~l~~~-~~~~~~~~~l~~~~~~~~---- 256 (334)
T d1dcea1 183 YRSCLLPQLHPQPDSGPQGRLPENVLL-KELELVQNAFFTDPNDQSAWFYHRWLLGR-AEPLFRCELSVEKSTVLQ---- 256 (334)
T ss_dssp HHHHHHHHHSCCCCSSSCCSSCHHHHH-HHHHHHHHHHHHCSSCSHHHHHHHHHHSC-CCCSSSCCCCHHHHHHHH----
T ss_pred HHHHHHHHhcCHHHHHHHHHHhHHhHH-HHHHHHHHHHHhcchhHHHHHHHHHHHhC-cchhhHHHHHHHHHHHHh----
Confidence 333332221 1110100000000 01112223334445555555555444321 222223333333333333
Q ss_pred HHHHHHhhCChHHHHHHHhhcCCCC---chhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 251 GRGIQIYCRSLGRSLLVFFKLREKN---LLCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 251 a~~~~~~~~~~~~a~~~~~~~~~p~---~~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
+..+|...+.+..+.+ ...|..+...+.+.|+.++|.+++++..+
T Consensus 257 ---------~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~eA~~~~~~ai~ 304 (334)
T d1dcea1 257 ---------SELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKA 304 (334)
T ss_dssp ---------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ---------hHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4446666666655444 45677788889999999999999998876
No 26
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=96.51 E-value=0.0015 Score=44.41 Aligned_cols=86 Identities=10% Similarity=-0.043 Sum_probs=66.2
Q ss_pred cccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHH
Q 044412 97 FSSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNT 176 (311)
Q Consensus 97 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~ 176 (311)
+.+.|++++|+..|++..... +-+...|..+-.+|.+.|++++ |...++...+.
T Consensus 26 ~~~~g~~~~A~~~~~~al~~~---------------p~~~~a~~~lg~~~~~~~~~~~----A~~~~~~al~~------- 79 (112)
T d1hxia_ 26 MLKLANLAEAALAFEAVCQKE---------------PEREEAWRSLGLTQAENEKDGL----AIIALNHARML------- 79 (112)
T ss_dssp HHHTTCHHHHHHHHHHHHHHS---------------TTCHHHHHHHHHHHHHTTCHHH----HHHHHHHHHHH-------
T ss_pred HHHHhhhHHHHHHHhhhcccc---------------cccchhhhhhhhhhhhhhhHHH----hhccccccccc-------
Confidence 678899999999999886642 3357888889999999999999 66555542211
Q ss_pred HHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCChhHHHHHHHHHH
Q 044412 177 MIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQFREALDAFNKTK 224 (311)
Q Consensus 177 li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~ 224 (311)
...+...|..+-..|...|+.++|++.|++..
T Consensus 80 ----------------~p~~~~a~~~la~~y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 80 ----------------DPKDIAVHAALAVSHTNEHNANAALASLRAWL 111 (112)
T ss_dssp ----------------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------ccccccchHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 12257788889999999999999999998753
No 27
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=96.45 E-value=0.016 Score=44.77 Aligned_cols=93 Identities=11% Similarity=-0.122 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCC-Cc
Q 044412 199 SWTTMITSYSQNKQFREALDAFNKTKKSGTGS-DQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREK-NL 276 (311)
Q Consensus 199 ~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p-~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p-~~ 276 (311)
+|..+-..|-+.|++++|++.|++..+. .| +..+|..+-.++.+.|++++|...|+. +.++ .| +.
T Consensus 39 ~~~~~G~~y~~~g~~~~A~~~~~~al~l--~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~------al~~-----~p~~~ 105 (259)
T d1xnfa_ 39 LLYERGVLYDSLGLRALARNDFSQALAI--RPDMPEVFNYLGIYLTQAGNFDAAYEAFDS------VLEL-----DPTYN 105 (259)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHTTCHHHHHHHHHH------HHHH-----CTTCT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHhhcc--CCCCHHHHhhhchHHHHHHHHHHhhhhhhH------HHHH-----Hhhhh
Confidence 4444455555566666666666665542 23 344555555556665655544443322 1111 12 23
Q ss_pred hhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 277 LCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 277 ~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
..|..+-..|...|++++|...|++..+
T Consensus 106 ~a~~~lg~~~~~~g~~~~A~~~~~~al~ 133 (259)
T d1xnfa_ 106 YAHLNRGIALYYGGRDKLAQDDLLAFYQ 133 (259)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3455555555555555555555555443
No 28
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.23 E-value=0.027 Score=41.36 Aligned_cols=93 Identities=15% Similarity=0.207 Sum_probs=65.6
Q ss_pred HHHHhCCChhHHHHHHHHHHhc--CC-CCC------------------HHHHHHHHHHHhccCChhhHHHHHHhhCChHH
Q 044412 205 TSYSQNKQFREALDAFNKTKKS--GT-GSD------------------QVTMATVLSACAHLGALDLGRGIQIYCRSLGR 263 (311)
Q Consensus 205 ~~~~~~g~~~~a~~~~~~m~~~--g~-~p~------------------~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~ 263 (311)
......|++++|.+.|.+-... |- -++ ...+..+..++...|++++|
T Consensus 19 ~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~A------------ 86 (179)
T d2ff4a2 19 VHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAV------------ 86 (179)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH------------
T ss_pred HHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH------------
Confidence 4567789999999999987763 21 111 13455566666666666644
Q ss_pred HHHHHhhcC--CC-CchhHHHHHHHHHhcCChHHHHHHHHHHHH-----cCCCCC
Q 044412 264 SLLVFFKLR--EK-NLLCWNSITEALAIHGFAHEALGMFDRMTY-----ENVRPN 310 (311)
Q Consensus 264 a~~~~~~~~--~p-~~~~~~~li~~~~~~g~~~~a~~~~~~M~~-----~g~~P~ 310 (311)
...+++.. .| +...|..++.+|.+.|+..+|.+.|++... -|+.|.
T Consensus 87 -l~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 87 -IAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp -HHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred -HHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 44444443 34 567899999999999999999999999753 588885
No 29
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.99 E-value=0.034 Score=40.32 Aligned_cols=94 Identities=14% Similarity=0.024 Sum_probs=65.3
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHhc-C----CCCC---------HHHHHHHHHHHhccCChhhHHHHHHhhCChHHHH
Q 044412 200 WTTMITSYSQNKQFREALDAFNKTKKS-G----TGSD---------QVTMATVLSACAHLGALDLGRGIQIYCRSLGRSL 265 (311)
Q Consensus 200 y~~li~~~~~~g~~~~a~~~~~~m~~~-g----~~p~---------~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~ 265 (311)
+...-..+.+.|++++|+..|.+..+. . .... ..+|+.+-.+|.+.|+++.|...++. |.
T Consensus 16 l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~------al 89 (170)
T d1p5qa1 16 VKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK------AL 89 (170)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH------HH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhh------hh
Confidence 444445677889999999999887653 1 1111 24556666777788888866554422 22
Q ss_pred HHHhhcCCC-CchhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 266 LVFFKLREK-NLLCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 266 ~~~~~~~~p-~~~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
++ .| ++..|..+-.+|...|++++|...|++..+
T Consensus 90 ~~-----~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 124 (170)
T d1p5qa1 90 EL-----DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQ 124 (170)
T ss_dssp HH-----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hc-----cccchhhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 11 34 677888899999999999999999998876
No 30
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=95.98 E-value=0.29 Score=39.48 Aligned_cols=62 Identities=3% Similarity=-0.111 Sum_probs=29.9
Q ss_pred HHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCCCchhHHHHHHHHHhcCChHHHHHHHHH
Q 044412 239 LSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREKNLLCWNSITEALAIHGFAHEALGMFDR 301 (311)
Q Consensus 239 i~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~ 301 (311)
+..|-..+-++++.-++..++..+.|..+.=.- .++..-....++.+.+.++.+...++...
T Consensus 168 ~~~c~~~~l~~elv~Ly~~~~~~~~A~~~~i~~-~~~~~~~~~f~e~~~k~~N~e~~~~~i~~ 229 (336)
T d1b89a_ 168 LRAAEQAHLWAELVFLYDKYEEYDNAIITMMNH-PTDAWKEGQFKDIITKVANVELYYRAIQF 229 (336)
T ss_dssp HHHHHTTTCHHHHHHHHHHTTCHHHHHHHHHHS-TTTTCCHHHHHHHHHHCSSTHHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHhcCCHHHHHHHHHHc-chhhhhHHHHHHHHHccCChHHHHHHHHH
Confidence 444555555555555555555555543322111 12333445556666666666655554443
No 31
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=95.95 E-value=0.063 Score=38.02 Aligned_cols=96 Identities=10% Similarity=0.023 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHhcC----CCCC-----------HHHHHHHHHHHhccCChhhHHHHHHhhCChHH
Q 044412 199 SWTTMITSYSQNKQFREALDAFNKTKKSG----TGSD-----------QVTMATVLSACAHLGALDLGRGIQIYCRSLGR 263 (311)
Q Consensus 199 ~y~~li~~~~~~g~~~~a~~~~~~m~~~g----~~p~-----------~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~ 263 (311)
.+...-..+.+.|++++|+..|.+....- -.++ ..+|+.+-.+|.+.|+++.|...+..
T Consensus 19 ~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~~------ 92 (153)
T d2fbna1 19 DIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK------ 92 (153)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhhc------
Confidence 44445567778899999999999876521 1112 23555666677777777766554322
Q ss_pred HHHHHhhcCCCCchhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 264 SLLVFFKLREKNLLCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 264 a~~~~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
|.++ ...++..|..+-.++...|++++|...|++..+
T Consensus 93 al~~----~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~ 129 (153)
T d2fbna1 93 VLKI----DKNNVKALYKLGVANMYFGFLEEAKENLYKAAS 129 (153)
T ss_dssp HHHH----STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cccc----cchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHH
Confidence 1111 133678999999999999999999999998776
No 32
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.95 E-value=0.0027 Score=43.84 Aligned_cols=89 Identities=7% Similarity=0.042 Sum_probs=54.1
Q ss_pred HHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCC---hhHH
Q 044412 140 TAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQ---FREA 216 (311)
Q Consensus 140 ~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~---~~~a 216 (311)
..+++.+...+++++ |++.|+..... ...+..++..+-.++.+.++ .++|
T Consensus 3 ~~l~n~~~~~~~l~~----Ae~~Y~~aL~~-----------------------~p~~~~~~~n~a~~L~~s~~~~d~~~A 55 (122)
T d1nzna_ 3 EAVLNELVSVEDLLK----FEKKFQSEKAA-----------------------GSVSKSTQFEYAWCLVRTRYNDDIRKG 55 (122)
T ss_dssp HHHHHHHHHHHHHHH----HHHHHHHHHHH-----------------------SCCCHHHHHHHHHHHTTSSSHHHHHHH
T ss_pred HHHHHHhcCHHHHHH----HHHHHHHHHhh-----------------------CCCCHHHHHHHHHHHHHhcchHHHHHH
Confidence 457777888888888 55555543221 12245666666666666544 3457
Q ss_pred HHHHHHHHhcCCCCCH-HHHHHHHHHHhccCChhhHHHHH
Q 044412 217 LDAFNKTKKSGTGSDQ-VTMATVLSACAHLGALDLGRGIQ 255 (311)
Q Consensus 217 ~~~~~~m~~~g~~p~~-~t~~~li~a~~~~~~~~~a~~~~ 255 (311)
+.+|++..+..-.|+. .++..|-.+|.+.|+++.|...|
T Consensus 56 i~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~ 95 (122)
T d1nzna_ 56 IVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYV 95 (122)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 7777777664433332 35666667777777777665554
No 33
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.94 E-value=0.0067 Score=44.34 Aligned_cols=69 Identities=7% Similarity=-0.033 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCChhHH
Q 044412 137 FVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQFREA 216 (311)
Q Consensus 137 ~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~~~~a 216 (311)
.+|+.+-.+|.+.|++++|+..+...+.. ...++..|..+-.+|...|++++|
T Consensus 63 ~~~~nla~~y~k~~~~~~A~~~~~~al~~---------------------------~p~~~~a~~~~g~~~~~~g~~~~A 115 (170)
T d1p5qa1 63 ASHLNLAMCHLKLQAFSAAIESCNKALEL---------------------------DSNNEKGLSRRGEAHLAVNDFELA 115 (170)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------------------CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHhhhhcccccchhhhhhhc---------------------------cccchhhhHHHHHHHHHhhhHHHH
Confidence 46777888999999999955544444433 122677888999999999999999
Q ss_pred HHHHHHHHhcCCCCCHHH
Q 044412 217 LDAFNKTKKSGTGSDQVT 234 (311)
Q Consensus 217 ~~~~~~m~~~g~~p~~~t 234 (311)
+..|++..+. .|+...
T Consensus 116 ~~~~~~al~l--~P~n~~ 131 (170)
T d1p5qa1 116 RADFQKVLQL--YPNNKA 131 (170)
T ss_dssp HHHHHHHHHH--CSSCHH
T ss_pred HHHHHHHHHh--CCCCHH
Confidence 9999999874 564433
No 34
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=95.92 E-value=0.012 Score=41.98 Aligned_cols=75 Identities=5% Similarity=0.096 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCCCcHhHHHHHHHHHHhCCChhH
Q 044412 136 VFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPAWDIRSWTTMITSYSQNKQFRE 215 (311)
Q Consensus 136 ~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~~~~~~y~~li~~~~~~g~~~~ 215 (311)
..+|+.+-.+|.+.|++++|...+...+.. ...++.+|..+..++...|++++
T Consensus 67 ~~~~~Nla~~~~~l~~~~~Al~~~~~al~~---------------------------~p~~~ka~~~~g~~~~~lg~~~~ 119 (153)
T d2fbna1 67 ISCNLNLATCYNKNKDYPKAIDHASKVLKI---------------------------DKNNVKALYKLGVANMYFGFLEE 119 (153)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------------------STTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHhhHHHHHHHhcccchhhhhhhccccc---------------------------cchhhhhhHHhHHHHHHcCCHHH
Confidence 357788888999999999954444444332 12367889999999999999999
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHH
Q 044412 216 ALDAFNKTKKSGTGSDQVTMATVL 239 (311)
Q Consensus 216 a~~~~~~m~~~g~~p~~~t~~~li 239 (311)
|+..|+.-.+. .|+.......+
T Consensus 120 A~~~~~~al~l--~P~n~~~~~~l 141 (153)
T d2fbna1 120 AKENLYKAASL--NPNNLDIRNSY 141 (153)
T ss_dssp HHHHHHHHHHH--STTCHHHHHHH
T ss_pred HHHHHHHHHHh--CCCCHHHHHHH
Confidence 99999998874 56654443333
No 35
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.92 E-value=0.054 Score=37.06 Aligned_cols=100 Identities=12% Similarity=0.141 Sum_probs=70.5
Q ss_pred cccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHH
Q 044412 97 FSSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNT 176 (311)
Q Consensus 97 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~ 176 (311)
+.+.|++++|++.|++..+.. +.+...|..+-.+|.+.|++++ |...++...+
T Consensus 14 ~~~~~~y~~Ai~~y~~al~~~---------------p~~~~~~~~~a~~~~~~~~~~~----A~~~~~~al~-------- 66 (128)
T d1elra_ 14 AYKKKDFDTALKHYDKAKELD---------------PTNMTYITNQAAVYFEKGDYNK----CRELCEKAIE-------- 66 (128)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHTCHHH----HHHHHHHHHH--------
T ss_pred HHHcCCHHHHHHHHHHHHHhC---------------cccHHHHHhHHHHHHHcCchHH----HHHHHHHHHH--------
Confidence 557899999999999887642 4458889999999999999999 5555554222
Q ss_pred HHHHHHHHHHHHHhhCCCC--c-HhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHH
Q 044412 177 MIDAYARLAELLFNKMPAW--D-IRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMA 236 (311)
Q Consensus 177 li~~~~~~a~~~~~~m~~~--~-~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~ 236 (311)
+-...... + ..+|..+-..+...+++++|++.|..-... .|+.....
T Consensus 67 -----------l~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~--~~~~~~~~ 116 (128)
T d1elra_ 67 -----------VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE--HRTPDVLK 116 (128)
T ss_dssp -----------HHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCCHHHHH
T ss_pred -----------hCcccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc--CCCHHHHH
Confidence 11111111 1 246778888888999999999999887653 35554433
No 36
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=95.86 E-value=0.072 Score=37.76 Aligned_cols=101 Identities=18% Similarity=0.125 Sum_probs=72.7
Q ss_pred hHHHHHH--HHHHhCCChhHHHHHHHHHHhcC-CCCC----------HHHHHHHHHHHhccCChhhHHHHHHhhCChHHH
Q 044412 198 RSWTTMI--TSYSQNKQFREALDAFNKTKKSG-TGSD----------QVTMATVLSACAHLGALDLGRGIQIYCRSLGRS 264 (311)
Q Consensus 198 ~~y~~li--~~~~~~g~~~~a~~~~~~m~~~g-~~p~----------~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a 264 (311)
.+|..+- ..+...|++++|+..|++-.+.. --|+ ...|+.+-.+|...|+++.|..-+ ..+
T Consensus 8 ~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~------~~a 81 (156)
T d2hr2a1 8 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSA------DKA 81 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHH------HHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhh------hhh
Confidence 3566663 44556799999999999987621 1122 467888999999999999997654 456
Q ss_pred HHHHhhcCCC--C-----chhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 265 LLVFFKLREK--N-----LLCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 265 ~~~~~~~~~p--~-----~~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
.+++.+.... + ...|+.+-.+|...|++++|...|++..+
T Consensus 82 l~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~ 128 (156)
T d2hr2a1 82 LHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 128 (156)
T ss_dssp HHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhcccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665554422 1 23567788999999999999999998653
No 37
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.71 E-value=0.089 Score=35.88 Aligned_cols=97 Identities=14% Similarity=0.190 Sum_probs=70.1
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCCC---ch
Q 044412 201 TTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREKN---LL 277 (311)
Q Consensus 201 ~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p~---~~ 277 (311)
-.+=..+...|++++|+..|++..+.+ +-+...|..+-.+|.+.|+++.|...++..-.++. ....+. ..
T Consensus 8 k~~G~~~~~~~~y~~Ai~~y~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~------~~~~~~~~~a~ 80 (128)
T d1elra_ 8 KELGNDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGR------ENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH------HSTTCHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCc------ccHHHHHHHHH
Confidence 344567888999999999999998853 34577888999999999999988776644322221 111110 13
Q ss_pred hHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 278 CWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 278 ~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
+|..+-..+...+++++|.+.|++-..
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~ 107 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLA 107 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 677777788889999999999987654
No 38
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.52 E-value=0.0035 Score=51.13 Aligned_cols=194 Identities=8% Similarity=-0.072 Sum_probs=119.2
Q ss_pred hhhHHHHHHHHHHhccCcchhHHHHHHHHHhhccC--ChhHHHHhcccCCC---CCeeeeec-----cccCCChhHHHHH
Q 044412 40 IKELECVYATIVKTNANLDCFLAKQFISFCTSRFH--FIDYTILVFPQMQE---PNVFVYHA-----FSSLRHPLQAIAF 109 (311)
Q Consensus 40 ~~~~~~l~~~m~~~g~~p~~~~~~~ll~~~~~~~g--~~~~a~~~~~~m~~---~~~~~~~~-----~~~~~~~~~a~~~ 109 (311)
..++..+++...+.. +-+...|..+..++ ...+ +.++|...++...+ ++...+.. +...+..++|++.
T Consensus 89 ~~~al~~~~~~l~~~-pk~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Al~~ 166 (334)
T d1dcea1 89 VKAELGFLESCLRVN-PKSYGTWHHRCWLL-SRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAF 166 (334)
T ss_dssp HHHHHHHHHHHHHHC-TTCHHHHHHHHHHH-HTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCcHHHHHHhhHHH-HHhccccHHHHHHHHHHHHhhCchhhhhhhhHHHHHHHhccccHHHHHH
Confidence 444555666666543 23555666665555 5554 57888888888642 33333322 6678899999999
Q ss_pred HHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHH-----
Q 044412 110 YLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARL----- 184 (311)
Q Consensus 110 ~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~----- 184 (311)
++...+.. +-+...|+.+-..+.+.|+.++ |...+........... .....+...
T Consensus 167 ~~~~i~~~---------------p~~~~a~~~l~~~~~~~~~~~~----A~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~ 226 (334)
T d1dcea1 167 TDSLITRN---------------FSNYSSWHYRSCLLPQLHPQPD----SGPQGRLPENVLLKEL-ELVQNAFFTDPNDQ 226 (334)
T ss_dssp HHTTTTTT---------------CCCHHHHHHHHHHHHHHSCCCC----SSSCCSSCHHHHHHHH-HHHHHHHHHCSSCS
T ss_pred HHHHHHcC---------------CCCHHHHHHHHHHHHHhcCHHH----HHHHHHHhHHhHHHHH-HHHHHHHHhcchhH
Confidence 98876642 3457788888889999999999 5444443322111111 111111111
Q ss_pred HHHHHhh---CCCCcHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhccCChhhHHHHHHh
Q 044412 185 AELLFNK---MPAWDIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGS-DQVTMATVLSACAHLGALDLGRGIQIY 257 (311)
Q Consensus 185 a~~~~~~---m~~~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p-~~~t~~~li~a~~~~~~~~~a~~~~~~ 257 (311)
+...+.. ...++...+..+...+...|+.++|+..+.+.... .| +..++..+-.++...|+.++|...++.
T Consensus 227 a~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~p~~~~~~~~l~~~~~~~~~~~eA~~~~~~ 301 (334)
T d1dcea1 227 SAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPE--NKWCLLTIILLMRALDPLLYEKETLQYFST 301 (334)
T ss_dssp HHHHHHHHHHSCCCCSSSCCCCHHHHHHHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHCTGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHhh--CchHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 2222221 12234455666677777788999999999887653 33 445677788888898888877666543
No 39
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.36 E-value=0.13 Score=36.81 Aligned_cols=90 Identities=6% Similarity=0.006 Sum_probs=49.4
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHhc--------------CCCC-CHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHH
Q 044412 202 TMITSYSQNKQFREALDAFNKTKKS--------------GTGS-DQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLL 266 (311)
Q Consensus 202 ~li~~~~~~g~~~~a~~~~~~m~~~--------------g~~p-~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~ 266 (311)
..-..+...|++++|++.|.+..+. -+.| +...|..+-.++.+.|+++.|..
T Consensus 32 ~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~------------- 98 (169)
T d1ihga1 32 NIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD------------- 98 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH-------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChhhHHHHHHHHHHHHhhcccchhhh-------------
Confidence 3444556667777777766665321 0111 22234444455555555554433
Q ss_pred HHhhcC---CCCchhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 267 VFFKLR---EKNLLCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 267 ~~~~~~---~p~~~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
.+++.. ..+...|..+-.+|...|++++|...|++..+
T Consensus 99 ~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~ 139 (169)
T d1ihga1 99 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQE 139 (169)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHH
Confidence 333222 23456677777777777777777777777665
No 40
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.18 E-value=1.1 Score=36.00 Aligned_cols=233 Identities=9% Similarity=-0.051 Sum_probs=132.2
Q ss_pred HHHhhccChhhHHHHHHHHHHhccCcchhHHHHHHHHHhhccCChhHHHHhccc-CCCCCeeeeec--cccCCChhHHHH
Q 044412 32 NQLKKCSSIKELECVYATIVKTNANLDCFLAKQFISFCTSRFHFIDYTILVFPQ-MQEPNVFVYHA--FSSLRHPLQAIA 108 (311)
Q Consensus 32 ~~l~~~~~~~~~~~l~~~m~~~g~~p~~~~~~~ll~~~~~~~g~~~~a~~~~~~-m~~~~~~~~~~--~~~~~~~~~a~~ 108 (311)
.++..+.+.++...+++...+.+ ++.+|..+...| .+......+.-+-.. ...++...--+ |-..|.+++...
T Consensus 45 rl~~~~v~l~~~~~avd~~~k~~---~~~~~k~~~~~l-~~~~e~~la~i~~~~~~~~~d~l~~~v~~ye~~~~~e~Li~ 120 (336)
T d1b89a_ 45 RLASTLVHLGEYQAAVDGARKAN---STRTWKEVCFAC-VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELIT 120 (336)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHT---CHHHHHHHHHHH-HHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHcC---CHHHHHHHHHHH-HhCcHHHHHHHHHHHhhcCHHHHHHHHHHHHHcCChHHHHH
Confidence 33333344444444555555543 555777777777 666555544322111 11222111111 455556666666
Q ss_pred HHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhcc-CCCCCHhHHHHHHHHHHHH---
Q 044412 109 FYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDE-MPERKFATWNTMIDAYARL--- 184 (311)
Q Consensus 109 ~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~-~~~~~~~~~~~li~~~~~~--- 184 (311)
+++..... -..+...++-++.+|++.+. ++ ..+.+.. ...-+ ...++..|-+.
T Consensus 121 ~Le~~~~~---------------~~~~~~~~~~L~~lyak~~~-~k----l~e~l~~~s~~y~---~~k~~~~c~~~~l~ 177 (336)
T d1b89a_ 121 MLEAALGL---------------ERAHMGMFTELAILYSKFKP-QK----MREHLELFWSRVN---IPKVLRAAEQAHLW 177 (336)
T ss_dssp HHHHHTTS---------------TTCCHHHHHHHHHHHHTTCH-HH----HHHHHHHHSTTSC---HHHHHHHHHTTTCH
T ss_pred HHHHHHcC---------------CccchHHHHHHHHHHHHhCh-HH----HHHHHHhccccCC---HHHHHHHHHHcCCh
Confidence 66544221 24566778888888888753 33 2222322 11111 12222222221
Q ss_pred --HHHHHhhCCCC------------cHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhh
Q 044412 185 --AELLFNKMPAW------------DIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDL 250 (311)
Q Consensus 185 --a~~~~~~m~~~------------~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~ 250 (311)
+.-++.++... +..-....++.+.+.++++...++.....+. .|+ ..+.|+......-+..+
T Consensus 178 ~elv~Ly~~~~~~~~A~~~~i~~~~~~~~~~~f~e~~~k~~N~e~~~~~i~~yL~~--~p~--~i~~lL~~v~~~~d~~r 253 (336)
T d1b89a_ 178 AELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEF--KPL--LLNDLLMVLSPRLDHTR 253 (336)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHSTTTTCCHHHHHHHHHHCSSTHHHHHHHHHHHHH--CGG--GHHHHHHHHGGGCCHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHcchhhhhHHHHHHHHHccCChHHHHHHHHHHHHc--CHH--HHHHHHHHhccCCCHHH
Confidence 33344444332 2222334567778888888777777766653 353 44777888888888888
Q ss_pred HHHHHHhhCChHHHHHHHhhcCC-CCchhHHHHHHHHHhcCChHHH
Q 044412 251 GRGIQIYCRSLGRSLLVFFKLRE-KNLLCWNSITEALAIHGFAHEA 295 (311)
Q Consensus 251 a~~~~~~~~~~~~a~~~~~~~~~-p~~~~~~~li~~~~~~g~~~~a 295 (311)
..+.++..+++.....+++.... -+..+.+++.+.|....+++.-
T Consensus 254 ~V~~~~k~~~l~li~p~Le~v~~~n~~~vn~al~~lyie~~d~~~l 299 (336)
T d1b89a_ 254 AVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQAL 299 (336)
T ss_dssp HHHHHHHTTCTTTTHHHHHHHHTTCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhcCCcHHHHHHHHHHHHcChHHHHHHHHHHHhCcchhHHH
Confidence 99999888888888888877653 4567899999999999987553
No 41
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=94.13 E-value=0.17 Score=39.49 Aligned_cols=110 Identities=5% Similarity=0.033 Sum_probs=69.9
Q ss_pred ccCCChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhccCCC--CCH-hHH
Q 044412 98 SSLRHPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDEMPE--RKF-ATW 174 (311)
Q Consensus 98 ~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~--~~~-~~~ 174 (311)
.+.|++++|+..|++-.+.. +-|...+..+...|+..|++++ |...++...+ |+. ..+
T Consensus 7 L~~G~l~eAl~~l~~al~~~---------------P~d~~ar~~La~lL~~~G~~e~----A~~~l~~a~~l~P~~~~~~ 67 (264)
T d1zbpa1 7 LSEGQLQQALELLIEAIKAS---------------PKDASLRSSFIELLCIDGDFER----ADEQLMQSIKLFPEYLPGA 67 (264)
T ss_dssp TTTTCHHHHHHHHHHHHHTC---------------TTCHHHHHHHHHHHHHHTCHHH----HHHHHHHHHHHCGGGHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHC---------------CCCHHHHHHHHHHHHHCCCHHH----HHHHHHHHHHhCCCcHHHH
Confidence 46799999999999987752 5568999999999999999999 5555554432 322 222
Q ss_pred HHHHHHHHHH--HHHHHhhCC------CC-cHhHHHHHHHHHHhCCChhHHHHHHHHHHhc
Q 044412 175 NTMIDAYARL--AELLFNKMP------AW-DIRSWTTMITSYSQNKQFREALDAFNKTKKS 226 (311)
Q Consensus 175 ~~li~~~~~~--a~~~~~~m~------~~-~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~ 226 (311)
..+-..+... -.+.+.... .| +...+......+...|+.++|.+++.+..+.
T Consensus 68 ~~l~~ll~a~~~~~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~ 128 (264)
T d1zbpa1 68 SQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEEL 128 (264)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccHHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence 2222222111 222333222 12 2333444455667779999999999887663
No 42
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=94.08 E-value=0.43 Score=33.94 Aligned_cols=100 Identities=15% Similarity=0.060 Sum_probs=63.4
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHh---cCCCCC-----------HHHHHHHHHHHhccCChhhHHHHHHhhCChHHH
Q 044412 199 SWTTMITSYSQNKQFREALDAFNKTKK---SGTGSD-----------QVTMATVLSACAHLGALDLGRGIQIYCRSLGRS 264 (311)
Q Consensus 199 ~y~~li~~~~~~g~~~~a~~~~~~m~~---~g~~p~-----------~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a 264 (311)
.+.-.-..+.+.|++++|++.|.+-.. ....++ ...|+.+-.+|.+.|++++|...++..-.
T Consensus 17 ~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~---- 92 (168)
T d1kt1a1 17 IVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG---- 92 (168)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhhhh----
Confidence 344455667788999999999877553 111111 12344455566677777755554332111
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHhcCChHHHHHHHHHHHHcCCCCC
Q 044412 265 LLVFFKLREKNLLCWNSITEALAIHGFAHEALGMFDRMTYENVRPN 310 (311)
Q Consensus 265 ~~~~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~M~~~g~~P~ 310 (311)
+...++..|..+-.++...|++++|...|++..+ +.|+
T Consensus 93 ------l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~--l~P~ 130 (168)
T d1kt1a1 93 ------LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLE--VNPQ 130 (168)
T ss_dssp ------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--SCTT
T ss_pred ------cccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCC
Confidence 1134667888888899999999999999988875 3454
No 43
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=93.82 E-value=0.17 Score=39.40 Aligned_cols=27 Identities=0% Similarity=-0.305 Sum_probs=21.0
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHc
Q 044412 279 WNSITEALAIHGFAHEALGMFDRMTYE 305 (311)
Q Consensus 279 ~~~li~~~~~~g~~~~a~~~~~~M~~~ 305 (311)
+......+...|+.++|...+++..+.
T Consensus 102 ~l~~a~~~~~~gd~~~A~~~~~~a~e~ 128 (264)
T d1zbpa1 102 SLVSFNLSMVSQDYEQVSELALQIEEL 128 (264)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence 344456677899999999999987653
No 44
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=93.47 E-value=0.3 Score=34.73 Aligned_cols=60 Identities=8% Similarity=-0.010 Sum_probs=48.6
Q ss_pred cHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHH
Q 044412 196 DIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQI 256 (311)
Q Consensus 196 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~ 256 (311)
+...|+.+-.++.+.|++++|+..+.+..+.. +-+...|..+-.++.+.|+++.|...|+
T Consensus 76 ~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~-p~~~~a~~~~g~~~~~l~~~~~A~~~~~ 135 (169)
T d1ihga1 76 ALSCVLNIGACKLKMSDWQGAVDSCLEALEID-PSNTKALYRRAQGWQGLKEYDQALADLK 135 (169)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccchhhhhhhhhhhhh-hhhhhHHHhHHHHHHHccCHHHHHHHHH
Confidence 45578888889999999999999999998742 3356688889999999999997766553
No 45
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=93.45 E-value=0.33 Score=32.85 Aligned_cols=113 Identities=11% Similarity=0.034 Sum_probs=82.0
Q ss_pred CcHhHHHHHHHHHHhCCChhHHHHHHHHHHh-cCCCCCHHHHHHHHHHHhccCC----hhhHHHHHHhhCChHHHHHHHh
Q 044412 195 WDIRSWTTMITSYSQNKQFREALDAFNKTKK-SGTGSDQVTMATVLSACAHLGA----LDLGRGIQIYCRSLGRSLLVFF 269 (311)
Q Consensus 195 ~~~~~y~~li~~~~~~g~~~~a~~~~~~m~~-~g~~p~~~t~~~li~a~~~~~~----~~~a~~~~~~~~~~~~a~~~~~ 269 (311)
.+..-||-+|=.....-+.+-.+.+++..-+ ..+.|.. -...++.++.+.+. ++.|..++-..++-+.-.++.+
T Consensus 32 s~~~E~NW~ICNiidt~dC~~v~~~Ld~IG~~FDls~C~-Nlk~vv~C~~~~n~~se~vdlALd~lv~~~kkd~Ld~i~~ 110 (161)
T d1wy6a1 32 STKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQ-NLKSVVECGVINNTLNEHVNKALDILVIQGKRDKLEEIGR 110 (161)
T ss_dssp SCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCS-CTHHHHHHHHHTTCCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCccccceeeeecccccchHHHHHHHHHHhhhcCchhhh-cHHHHHHHHHHhcchHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4566677777777777777777777777654 2222221 23455666666553 4667777777888888888877
Q ss_pred hcC---CCCchhHHHHHHHHHhcCChHHHHHHHHHHHHcCCC
Q 044412 270 KLR---EKNLLCWNSITEALAIHGFAHEALGMFDRMTYENVR 308 (311)
Q Consensus 270 ~~~---~p~~~~~~~li~~~~~~g~~~~a~~~~~~M~~~g~~ 308 (311)
.+. +|++...-.+-.||-+-|...++.+++.+.-+.|++
T Consensus 111 ~l~kn~~i~~~~llkia~A~kkig~~re~nell~~ACe~G~K 152 (161)
T d1wy6a1 111 EILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKGEK 152 (161)
T ss_dssp HHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhHH
Confidence 744 788888888899999999999999999999998874
No 46
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=93.41 E-value=0.68 Score=32.27 Aligned_cols=107 Identities=14% Similarity=0.056 Sum_probs=69.6
Q ss_pred hHHHHH--HHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCCC--------cHhHHHHHHHH
Q 044412 137 FVQTAM--VDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPAW--------DIRSWTTMITS 206 (311)
Q Consensus 137 ~~~~~l--l~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~~--------~~~~y~~li~~ 206 (311)
..|..+ -..+.+.|++++ |...|.+ |.++....++. ....|+.+-.+
T Consensus 8 ~a~~~l~~g~~~~~~g~y~~----Ai~~y~~-------------------Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~ 64 (156)
T d2hr2a1 8 GAYLALSDAQRQLVAGEYDE----AAANCRR-------------------AMEISHTMPPEEAFDHAGFDAFCHAGLAEA 64 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHH----HHHHHHH-------------------HHHHHTTSCTTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHH----HHHHHHH-------------------HHHhChhhhhhhhcccchhHHHHHHHHHHH
Confidence 345555 445667799999 6666655 33444444321 23578899999
Q ss_pred HHhCCChhHHHHHHHHHHhc-----CCCCCH-----HHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcC
Q 044412 207 YSQNKQFREALDAFNKTKKS-----GTGSDQ-----VTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLR 272 (311)
Q Consensus 207 ~~~~g~~~~a~~~~~~m~~~-----g~~p~~-----~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~ 272 (311)
|.+.|++++|...+++..+. ...++. ..|+.+-.+|...|++++|...|+ .|.+++.+..
T Consensus 65 ~~~lg~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~------~Al~l~~~~~ 134 (156)
T d2hr2a1 65 LAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFK------KVVEMIEERK 134 (156)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH------HHHHHHHHCC
T ss_pred HHHcCccchhhHhhhhhhhcccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHH------HHHHhhHHhh
Confidence 99999999999999887642 223322 245666788888899888876653 4444444443
No 47
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.94 E-value=0.64 Score=29.40 Aligned_cols=66 Identities=9% Similarity=-0.027 Sum_probs=47.4
Q ss_pred HHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcCCC--C-chhHHHHHHHHHhcCChHHHHHHHHHHHHcCCCCC
Q 044412 237 TVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLREK--N-LLCWNSITEALAIHGFAHEALGMFDRMTYENVRPN 310 (311)
Q Consensus 237 ~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~~p--~-~~~~~~li~~~~~~g~~~~a~~~~~~M~~~g~~P~ 310 (311)
-+=..+.+.|+++.|...|+ +|.+++..-..+ + ..+++.+-.++.+.|++++|...+++..+ +.|+
T Consensus 10 ~lG~~~~~~g~y~~A~~~~~------~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~--l~P~ 78 (95)
T d1tjca_ 10 ELGKVAYTEADYYHTELWME------QALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE--LDPE 78 (95)
T ss_dssp HHHHHHHHTTCHHHHHHHHH------HHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTT
T ss_pred HHHHHHHHCCCHHHHHHHHH------HHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHH--hCcC
Confidence 34455677888888877653 455555443322 2 35789999999999999999999999886 3465
No 48
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=91.76 E-value=1.4 Score=30.92 Aligned_cols=58 Identities=9% Similarity=0.158 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHH
Q 044412 198 RSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQI 256 (311)
Q Consensus 198 ~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~ 256 (311)
..|+.+-.+|.+.|++++|+..+++..+.. +.+...|..+-.++...|+++.|...|.
T Consensus 65 ~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~-p~~~~a~~~~~~~~~~l~~~~~A~~~~~ 122 (168)
T d1kt1a1 65 AAFLNLAMCYLKLREYTKAVECCDKALGLD-SANEKGLYRRGEAQLLMNEFESAKGDFE 122 (168)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhHHHHHHHhhhcccchhhhhhhhhcc-cchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 457778888999999999999999988752 4467788888899999998886666553
No 49
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.96 E-value=0.78 Score=28.96 Aligned_cols=70 Identities=7% Similarity=0.020 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhCCCCccchHHHHHHhccCCCCCHhHHHHHHHHHHHHHHHHHhhCCC--C-cHhHHHHHHHHHHhCCChh
Q 044412 138 VQTAMVDNYSYSNKFFESRRVSRRLFDEMPERKFATWNTMIDAYARLAELLFNKMPA--W-DIRSWTTMITSYSQNKQFR 214 (311)
Q Consensus 138 ~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~~~~~~~~~li~~~~~~a~~~~~~m~~--~-~~~~y~~li~~~~~~g~~~ 214 (311)
.+-.+-..+.+.|++++ |...|++ |.++...-.. + ...+++.+-.++.+.|+++
T Consensus 7 dc~~lG~~~~~~g~y~~----A~~~~~~-------------------Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~ 63 (95)
T d1tjca_ 7 DSFELGKVAYTEADYYH----TELWMEQ-------------------ALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLD 63 (95)
T ss_dssp HHHHHHHHHHHTTCHHH----HHHHHHH-------------------HHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHCCCHHH----HHHHHHH-------------------HHHHHhhhhccCccHHHHHHHHhhHHHhcCChH
Confidence 33456667889999999 6666665 3334333322 2 2457889999999999999
Q ss_pred HHHHHHHHHHhcCCCCCH
Q 044412 215 EALDAFNKTKKSGTGSDQ 232 (311)
Q Consensus 215 ~a~~~~~~m~~~g~~p~~ 232 (311)
+|++.+++..+. .|+.
T Consensus 64 ~A~~~y~~aL~l--~P~~ 79 (95)
T d1tjca_ 64 KALLLTKKLLEL--DPEH 79 (95)
T ss_dssp HHHHHHHHHHHH--CTTC
T ss_pred HHHHHHHHHHHh--CcCC
Confidence 999999999874 5664
No 50
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=89.37 E-value=0.51 Score=32.69 Aligned_cols=83 Identities=11% Similarity=0.099 Sum_probs=53.6
Q ss_pred CChhHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhccCCh----hhHHHHHHhhCChHHHHHHHhhcC--CCCchhHHHHH
Q 044412 211 KQFREALDAFNKTKKSGTGS-DQVTMATVLSACAHLGAL----DLGRGIQIYCRSLGRSLLVFFKLR--EKNLLCWNSIT 283 (311)
Q Consensus 211 g~~~~a~~~~~~m~~~g~~p-~~~t~~~li~a~~~~~~~----~~a~~~~~~~~~~~~a~~~~~~~~--~p~~~~~~~li 283 (311)
+.+++|+..|++..+. .| +..+|..+=.+|...|.+ ..+. +....|.+.|++.. .|+..+|..-+
T Consensus 55 ~~~~~Ai~~~~kAl~l--~P~~~~a~~~lG~~y~~~g~~~~~~~~~~------~~~~~A~~~~~kal~l~P~~~~~~~~L 126 (145)
T d1zu2a1 55 QMIQEAITKFEEALLI--DPKKDEAVWCIGNAYTSFAFLTPDETEAK------HNFDLATQFFQQAVDEQPDNTHYLKSL 126 (145)
T ss_dssp HHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--cchhhHHHhhHHHHHHHcccchhhHHHHH------HhHHHhhhhhhcccccCCCHHHHHHHH
Confidence 4568899999988874 45 456777777777665432 2222 22345666676655 78887777666
Q ss_pred HHHHhcCChHHHHHHHHHHHHcCC
Q 044412 284 EALAIHGFAHEALGMFDRMTYENV 307 (311)
Q Consensus 284 ~~~~~~g~~~~a~~~~~~M~~~g~ 307 (311)
.-+. .|.+++.+..+.|+
T Consensus 127 ~~~~------ka~~~~~e~~k~~~ 144 (145)
T d1zu2a1 127 EMTA------KAPQLHAEAYKQGL 144 (145)
T ss_dssp HHHH------THHHHHHHHHHSSS
T ss_pred HHHH------HHHHHHHHHHHHhc
Confidence 5553 46777777777664
No 51
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=88.10 E-value=0.3 Score=33.98 Aligned_cols=94 Identities=13% Similarity=0.045 Sum_probs=60.9
Q ss_pred HHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcC--CC-CchhHHHHH
Q 044412 207 YSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLR--EK-NLLCWNSIT 283 (311)
Q Consensus 207 ~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~--~p-~~~~~~~li 283 (311)
|-+.+.+++|+..|+.-.+.. +-+...+..+=.++...++...+..- .+..++|...|++.. .| +...|+.+-
T Consensus 7 ~~r~~~fe~A~~~~e~al~~~-P~~~~~~~~~g~~l~~~~~~~~~~e~---~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG 82 (145)
T d1zu2a1 7 FDRILLFEQIRQDAENTYKSN-PLDADNLTRWGGVLLELSQFHSISDA---KQMIQEAITKFEEALLIDPKKDEAVWCIG 82 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHSCHHHH---HHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHccHHHHHHHHHHHHhhC-CcchHHHHHHHHHHHHhhhhhhhhHH---HHHHHHHHHHHHHHHHhcchhhHHHhhHH
Confidence 345567899999999988753 33455666666666665555444322 234456777776655 44 567888887
Q ss_pred HHHHhcCC-----------hHHHHHHHHHHHH
Q 044412 284 EALAIHGF-----------AHEALGMFDRMTY 304 (311)
Q Consensus 284 ~~~~~~g~-----------~~~a~~~~~~M~~ 304 (311)
.+|...|+ +++|.+.|++..+
T Consensus 83 ~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~ 114 (145)
T d1zu2a1 83 NAYTSFAFLTPDETEAKHNFDLATQFFQQAVD 114 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcccchhhHHHHHHhHHHhhhhhhcccc
Confidence 77776543 5677777777664
No 52
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=81.65 E-value=1.7 Score=27.65 Aligned_cols=57 Identities=12% Similarity=0.108 Sum_probs=43.7
Q ss_pred HHHHHhhcc-ChhhHHHHHHHHHHhccCcchhHHHHHHHHHhhccCChhHHHHhcccCC
Q 044412 30 IANQLKKCS-SIKELECVYATIVKTNANLDCFLAKQFISFCTSRFHFIDYTILVFPQMQ 87 (311)
Q Consensus 30 ~~~~l~~~~-~~~~~~~l~~~m~~~g~~p~~~~~~~ll~~~~~~~g~~~~a~~~~~~m~ 87 (311)
|...+..-. +.=++++-+..+....+.|++.+..+.+++| .|..++..|.++|+.++
T Consensus 11 y~~~F~~~~iD~we~rrgmN~l~~~DlVPeP~Ii~aALrAc-RRvND~alAVR~lE~vK 68 (105)
T d1v54e_ 11 WVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRAC-RRLNDFASAVRILEVVK 68 (105)
T ss_dssp HHHHHTCTTCCHHHHHHHHHHHTTSSBCCCHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHhcCcCccHHHHHHHHHHHhccccCCCcHHHHHHHHHH-HHhhhHHHHHHHHHHHH
Confidence 344444332 3335567777777888999999999999999 99999999999997764
No 53
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=72.04 E-value=7.8 Score=24.50 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=31.8
Q ss_pred ChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHH
Q 044412 212 QFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQ 255 (311)
Q Consensus 212 ~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~ 255 (311)
+.-++.+-+..+-...+-|++....+.++||.|.+++..|.+++
T Consensus 21 D~we~rrgmN~l~~~DlVPeP~Ii~aALrAcRRvND~alAVR~l 64 (105)
T d1v54e_ 21 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRIL 64 (105)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34455566666666678888888888888888888887665555
No 54
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.79 E-value=2.3 Score=35.86 Aligned_cols=48 Identities=4% Similarity=-0.030 Sum_probs=27.5
Q ss_pred cHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhc
Q 044412 196 DIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAH 244 (311)
Q Consensus 196 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~ 244 (311)
+..+|+.+-..+...|+..+|+..|.+-.... +|-..++..|...+.+
T Consensus 185 ~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~-~~~~~a~~nL~~~~~~ 232 (497)
T d1ya0a1 185 NGQPYNQLAILASSKGDHLTTIFYYCRSIAVK-FPFPAASTNLQKALSK 232 (497)
T ss_dssp BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSS-BCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHH
Confidence 34556666666666666666666666655432 3445555555555544
No 55
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.37 E-value=8.3 Score=32.20 Aligned_cols=69 Identities=9% Similarity=0.028 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCccchHHHHHHhccCCC--C-CHhHHHHHHHHHHHH-----HHHHHhhC---CCCcHhHHHHHHHH
Q 044412 138 VQTAMVDNYSYSNKFFESRRVSRRLFDEMPE--R-KFATWNTMIDAYARL-----AELLFNKM---PAWDIRSWTTMITS 206 (311)
Q Consensus 138 ~~~~ll~~~~~~g~~~~a~~~a~~~~~~~~~--~-~~~~~~~li~~~~~~-----a~~~~~~m---~~~~~~~y~~li~~ 206 (311)
.+..+-+.+...|++++ |...+.+..+ | +..+|+.+=..+... |...|.+- ..|-..+++.|...
T Consensus 154 ~~~~LG~l~~~~~~~~~----A~~~y~~A~~l~P~~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~ 229 (497)
T d1ya0a1 154 CLVHLGDIARYRNQTSQ----AESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHTTCHHH----HHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHH----HHHHHHHHHHHCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 44555566666666666 4444443321 2 234555554444432 33333322 23556677777766
Q ss_pred HHhC
Q 044412 207 YSQN 210 (311)
Q Consensus 207 ~~~~ 210 (311)
|.+.
T Consensus 230 ~~~~ 233 (497)
T d1ya0a1 230 LSKA 233 (497)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
No 56
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=63.00 E-value=5.8 Score=22.21 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=30.9
Q ss_pred hhHHHHHHHHhhccChhhH--HHHHHHHHHhccCcchhHH
Q 044412 25 IRIHIIANQLKKCSSIKEL--ECVYATIVKTNANLDCFLA 62 (311)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~--~~l~~~m~~~g~~p~~~~~ 62 (311)
+|..|...+|...+.+.+. +.+.+.+.+.|+.||...-
T Consensus 12 VS~sTVSr~ln~~~~vs~~tr~rV~~~a~~lgY~pn~~Ar 51 (57)
T d1qpza1 12 VSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVAR 51 (57)
T ss_dssp SCHHHHHHHHHTCSCCCHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred cCHHHHHHHHCCCCccCHHHHHHHHHHHHHHCCCCCHHHH
Confidence 4567888899887777666 8899999999999998653
No 57
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=59.40 E-value=21 Score=23.76 Aligned_cols=61 Identities=7% Similarity=-0.052 Sum_probs=48.0
Q ss_pred cHhHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChhhHHHHHHh
Q 044412 196 DIRSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALDLGRGIQIY 257 (311)
Q Consensus 196 ~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~~a~~~~~~ 257 (311)
+...++--++.+...|+-+.-.+++.++.+ +-+|++...-.+-.||.+.|+.+++..++.+
T Consensus 85 ~se~vdlALd~lv~~~kkd~Ld~i~~~l~k-n~~i~~~~llkia~A~kkig~~re~nell~~ 145 (161)
T d1wy6a1 85 LNEHVNKALDILVIQGKRDKLEEIGREILK-NNEVSASILVAIANALRRVGDERDATTLLIE 145 (161)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHC---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHhcchhhHHHHHHH
Confidence 445566778888889998888899998777 5688899999999999999999877665544
No 58
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=57.36 E-value=21 Score=23.15 Aligned_cols=83 Identities=7% Similarity=-0.070 Sum_probs=46.7
Q ss_pred hCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhc----cCChhhHHHHHHhhCChHHHHHHHhhcC-CCCchhHHHHH
Q 044412 209 QNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAH----LGALDLGRGIQIYCRSLGRSLLVFFKLR-EKNLLCWNSIT 283 (311)
Q Consensus 209 ~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~----~~~~~~a~~~~~~~~~~~~a~~~~~~~~-~p~~~~~~~li 283 (311)
...+.++|++++++-.+.|.. .....|=..|.. ..+.++ |.+.|++-. .-++.....|-
T Consensus 35 ~~~~~~~a~~~~~~aa~~g~~---~a~~~Lg~~y~~g~~~~~d~~~-------------A~~~~~~aa~~g~~~a~~~Lg 98 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACELNSG---NGCRFLGDFYENGKYVKKDLRK-------------AAQYYSKACGLNDQDGCLILG 98 (133)
T ss_dssp TTSCHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHCSSSCCCHHH-------------HHHHHHHHHHTTCHHHHHHHH
T ss_pred cccCHHHHHHHHhhhhcccch---hhhhhHHHhhhhccccchhhHH-------------HHHHHhhhhccCcchHHHHHH
Confidence 346778888888887776632 222222222222 234444 444444433 22344444454
Q ss_pred HHHHh----cCChHHHHHHHHHHHHcCC
Q 044412 284 EALAI----HGFAHEALGMFDRMTYENV 307 (311)
Q Consensus 284 ~~~~~----~g~~~~a~~~~~~M~~~g~ 307 (311)
..|.. ..+.++|.++|++-.+.|.
T Consensus 99 ~~y~~G~gv~~d~~~A~~~~~~Aa~~G~ 126 (133)
T d1klxa_ 99 YKQYAGKGVVKNEKQAVKTFEKACRLGS 126 (133)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCccCCCHHHHHHHHHHHHHCCC
Confidence 44444 4588899999999887764
No 59
>d2k0bx1 a.5.2.1 (X:1-52) Sequestosome 1 (Sqstm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.74 E-value=9.6 Score=20.57 Aligned_cols=40 Identities=5% Similarity=-0.062 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhccCcchhHHHHHHHHHhhccCChhHHHHhccc
Q 044412 43 LECVYATIVKTNANLDCFLAKQFISFCTSRFHFIDYTILVFPQ 85 (311)
Q Consensus 43 ~~~l~~~m~~~g~~p~~~~~~~ll~~~~~~~g~~~~a~~~~~~ 85 (311)
+.+...+|...|+.-+-.-.+.|+. ++.+++..|+++.+.
T Consensus 10 l~~al~qM~aMGFsneGGWLt~LL~---skn~dI~~aLD~iq~ 49 (52)
T d2k0bx1 10 LIESLSQMLSMGFSDEGGWLTRLLQ---TKNYDIGAALDTIQY 49 (52)
T ss_dssp HHHHHHHHHHHTCCCSSSCHHHHHH---HTTSCHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCCcchHHHHHHH---HcCCCHHHHHHHHhh
Confidence 3566778999999988888888887 668999999988764
No 60
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.95 E-value=25 Score=23.14 Aligned_cols=48 Identities=8% Similarity=0.154 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCC
Q 044412 199 SWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGA 247 (311)
Q Consensus 199 ~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~ 247 (311)
-...+|.-|...|+.++|.+.++++......| ...+..+..+.-+.+.
T Consensus 9 k~~~ll~EY~~~~D~~Ea~~~l~eL~~p~~~~-e~V~~~i~~ale~~~~ 56 (129)
T d2nsza1 9 EIDMLLKEYLLSGDISEAEHCLKELEVPHFHH-ELVYEAIVMVLESTGE 56 (129)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCGGGHH-HHHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCchhhH-HHHHHHHHHHHhcCCH
Confidence 45678899999999999999999986322221 3444555555555443
No 61
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=54.82 E-value=16 Score=20.96 Aligned_cols=63 Identities=13% Similarity=0.078 Sum_probs=42.4
Q ss_pred HHHHHHHHHhccCChhhHHHHHHhhCChHHHHHHHhhcC--CCCchhHHHHHHHHHhcC-ChHHHHHHHHHHHHcCC
Q 044412 234 TMATVLSACAHLGALDLGRGIQIYCRSLGRSLLVFFKLR--EKNLLCWNSITEALAIHG-FAHEALGMFDRMTYENV 307 (311)
Q Consensus 234 t~~~li~a~~~~~~~~~a~~~~~~~~~~~~a~~~~~~~~--~p~~~~~~~li~~~~~~g-~~~~a~~~~~~M~~~g~ 307 (311)
||..+|......+++... ++..+++.+- +.+..--..++.++...| ..++.....+-|.+.+.
T Consensus 1 t~~~il~kl~~g~~Ls~e-----------e~~~~~~~i~~g~~~d~qiaafL~al~~kg~t~dEi~g~~~am~~~~~ 66 (69)
T d1khda1 1 THQPILEKLFKSQSMTQE-----------ESHQLFAAIVRGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQ 66 (69)
T ss_dssp CCHHHHHHHHTTCCCCHH-----------HHHHHHHHHTTTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHcCCCCCHH-----------HHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCC
Confidence 567778888877776533 6777777766 334444556666666555 57778888888888764
No 62
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=54.73 E-value=35 Score=24.81 Aligned_cols=96 Identities=13% Similarity=-0.005 Sum_probs=49.7
Q ss_pred cHhHHHHHHHHHHh----CCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhc----cCChhhHHHHHHhhCChHHHHHH
Q 044412 196 DIRSWTTMITSYSQ----NKQFREALDAFNKTKKSGTGSDQVTMATVLSACAH----LGALDLGRGIQIYCRSLGRSLLV 267 (311)
Q Consensus 196 ~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~----~~~~~~a~~~~~~~~~~~~a~~~ 267 (311)
+...+..+-..|.. ..+...+...++.-.+.| +......|=..+.. ..+.+.|...|..
T Consensus 141 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~g---~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~---------- 207 (265)
T d1ouva_ 141 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSK---------- 207 (265)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHH----------
T ss_pred ccchhhhhhhhhccCCCcccccccchhhhhcccccc---ccccccchhhhcccCcccccchhhhhhhHhh----------
Confidence 45556666666655 345566666666665544 23332222222222 3455555444433
Q ss_pred HhhcC-CCCchhHHHHHHHHHh----cCChHHHHHHHHHHHHcCC
Q 044412 268 FFKLR-EKNLLCWNSITEALAI----HGFAHEALGMFDRMTYENV 307 (311)
Q Consensus 268 ~~~~~-~p~~~~~~~li~~~~~----~g~~~~a~~~~~~M~~~g~ 307 (311)
-. .-++..+..|-..|.+ .++.++|.++|++-.+.|-
T Consensus 208 ---aa~~g~~~a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~ 249 (265)
T d1ouva_ 208 ---ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGA 249 (265)
T ss_dssp ---HHHTTCHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTC
T ss_pred ---hhcccCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcC
Confidence 22 1234444555555543 3478888888888766653
No 63
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=53.50 E-value=9.8 Score=21.20 Aligned_cols=37 Identities=11% Similarity=0.158 Sum_probs=29.9
Q ss_pred hhHHHHHHHHhhccChhhH--HHHHHHHHHhccCcchhH
Q 044412 25 IRIHIIANQLKKCSSIKEL--ECVYATIVKTNANLDCFL 61 (311)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~--~~l~~~m~~~g~~p~~~~ 61 (311)
+|..|...+|...+.+.+. +.+.+.+.+.|+.||...
T Consensus 13 vS~~TVSr~Ln~~~~Vs~~tr~rV~~aa~~lgY~pn~~A 51 (57)
T d2hsga1 13 VSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVA 51 (57)
T ss_dssp SCHHHHHHHHTTCTTSCHHHHHHHHHHHHHHTCCSCHHH
T ss_pred cCHHHHHHHhCCCCcCCHHHHHHHHHHHHHHCcCCCHHH
Confidence 3566888889877776666 889999999999999854
No 64
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=51.84 E-value=39 Score=24.51 Aligned_cols=59 Identities=14% Similarity=0.006 Sum_probs=35.5
Q ss_pred cHhHHHHHHHHHHh----CCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhc----cCChhhHHHHHHh
Q 044412 196 DIRSWTTMITSYSQ----NKQFREALDAFNKTKKSGTGSDQVTMATVLSACAH----LGALDLGRGIQIY 257 (311)
Q Consensus 196 ~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~----~~~~~~a~~~~~~ 257 (311)
+......+=..|.. ..++++|+..|..-.+.| ++..+..|-..|.+ ..+.+.|.+.|+.
T Consensus 177 ~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~g---~~~a~~~LG~~y~~G~g~~~n~~~A~~~~~k 243 (265)
T d1ouva_ 177 DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELE---NGGGCFNLGAMQYNGEGVTRNEKQAIENFKK 243 (265)
T ss_dssp CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHTTSSSSCCSTTHHHHHHH
T ss_pred ccccccchhhhcccCcccccchhhhhhhHhhhhccc---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHH
Confidence 34444344333433 468999999999988876 33444444444443 3477777777766
No 65
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=50.05 E-value=30 Score=22.64 Aligned_cols=28 Identities=18% Similarity=0.003 Sum_probs=21.6
Q ss_pred hhHHHHHHHHHhcCChHHHHHHHHHHHH
Q 044412 277 LCWNSITEALAIHGFAHEALGMFDRMTY 304 (311)
Q Consensus 277 ~~~~~li~~~~~~g~~~~a~~~~~~M~~ 304 (311)
..+-.|--+|.+.|++++|..+++...+
T Consensus 74 d~lY~Lav~yyklgdy~~A~~~~~~~L~ 101 (124)
T d2pqrb1 74 ECLYYLTIGCYKLGEYSMAKRYVDTLFE 101 (124)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 3455666778888888888888888775
No 66
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.58 E-value=19 Score=25.77 Aligned_cols=55 Identities=7% Similarity=-0.093 Sum_probs=27.4
Q ss_pred HHHHhhccChhhHHHHHHHHHHhccCcchhHHHHHHHHHhhccCChhHHHHhcccCC
Q 044412 31 ANQLKKCSSIKELECVYATIVKTNANLDCFLAKQFISFCTSRFHFIDYTILVFPQMQ 87 (311)
Q Consensus 31 ~~~l~~~~~~~~~~~l~~~m~~~g~~p~~~~~~~ll~~~~~~~g~~~~a~~~~~~m~ 87 (311)
...+...|+.+.+++++..-...=-..|..-++.|..+ +..|+.+-+.-+.+...
T Consensus 7 ~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~A--a~~g~~e~~~~l~~~~~ 61 (223)
T d1uoha_ 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWA--CSAGHTEIVEFLLQLGV 61 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHH--HHHTCHHHHHHHHHHTC
T ss_pred HHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHH--HHhhhhccccccccccc
Confidence 34445666666665555321111112333344444444 46778777766665544
No 67
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=45.01 E-value=16 Score=20.48 Aligned_cols=37 Identities=14% Similarity=0.145 Sum_probs=30.2
Q ss_pred hhHHHHHHHHhhccChhhH--HHHHHHHHHhccCcchhH
Q 044412 25 IRIHIIANQLKKCSSIKEL--ECVYATIVKTNANLDCFL 61 (311)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~--~~l~~~m~~~g~~p~~~~ 61 (311)
+|..|...+|...+.+.+. +.+.+.+.+.|+.||...
T Consensus 14 vS~sTVSr~l~~~~~vs~~tr~rI~~~a~~lgY~pn~~A 52 (59)
T d1efaa1 14 VSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVA 52 (59)
T ss_dssp SCHHHHHHHHTTCSSCCTHHHHHHHHHHHHHTCCCCHHH
T ss_pred CCHHHHHHHHCCCCcCCHHHHHHHHHHHHHHCCCcCHHH
Confidence 3567888899888777666 789999999999999864
No 68
>d2qw6a1 a.80.1.2 (A:241-328) Uncharacterized protein EfaeDRAFT_0938 {Enterococcus faecium [TaxId: 1352]}
Probab=44.68 E-value=19 Score=22.01 Aligned_cols=39 Identities=10% Similarity=0.176 Sum_probs=26.6
Q ss_pred hCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCCh
Q 044412 209 QNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGAL 248 (311)
Q Consensus 209 ~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~ 248 (311)
+.++++.|+-.+.+|.+.| .|....=..++-+.-..|..
T Consensus 12 RgSD~dAAlywlarml~~G-D~~~i~RRLi~~AsEDIGlA 50 (88)
T d2qw6a1 12 RGSDVDAALHYLARLVEAG-DLASICRRLMVIGYEDIGLG 50 (88)
T ss_dssp HTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHTC---
T ss_pred HcCCccHHHHHHHHHHHcC-ChhHHHHHHHHHHHHHhhcc
Confidence 3589999999999999999 66544444555555555543
No 69
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=37.84 E-value=32 Score=22.55 Aligned_cols=49 Identities=10% Similarity=0.103 Sum_probs=39.4
Q ss_pred HHHHHHHhhc-cChhhHHHHHHHHHHhccCcchhHHHHHHHHHhhccCChh
Q 044412 28 HIIANQLKKC-SSIKELECVYATIVKTNANLDCFLAKQFISFCTSRFHFID 77 (311)
Q Consensus 28 ~~~~~~l~~~-~~~~~~~~l~~~m~~~g~~p~~~~~~~ll~~~~~~~g~~~ 77 (311)
..+..+|... +++-.+.++++.+.+.|..++..|.-..|+.+ .+.|-+.
T Consensus 19 ~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~i~~aTVYR~L~~l-~e~gli~ 68 (134)
T d1mzba_ 19 VKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQF-EAAGLVV 68 (134)
T ss_dssp HHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHH-HHHTSEE
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHhCCCccHHHHHHHHHHH-HhccEEE
Confidence 3666777655 56888999999999999999999888888888 7777554
No 70
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.07 E-value=31 Score=19.58 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccC
Q 044412 199 SWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLG 246 (311)
Q Consensus 199 ~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~ 246 (311)
.+|-|++.++...-+++++.++++..+.|. .+..+|---+..+++..
T Consensus 3 a~nQl~~l~Aed~AieDaiy~L~~aL~~G~-I~~d~ylK~vR~LaReQ 49 (64)
T d2f6ma1 3 GLNQLYNLVAQDYALTDTIEALSRMLHRGT-IPLDTFVKQGRELARQQ 49 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-cCHHHHHHHHHHHHHHH
Confidence 467889999998889999999999999984 55888888888877743
No 71
>d1u9pa1 a.43.1.1 (A:72-107) Arc repressor {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=33.39 E-value=24 Score=16.67 Aligned_cols=25 Identities=12% Similarity=0.195 Sum_probs=21.0
Q ss_pred HHhcCCCchhHHHHHHHHHHhCCCC
Q 044412 128 WKNGFSSPVFVQTAMVDNYSYSNKF 152 (311)
Q Consensus 128 ~~~g~~~~~~~~~~ll~~~~~~g~~ 152 (311)
...|...+..+|..++..+-+.|++
T Consensus 12 eeng~s~ns~iy~~vmes~kkegri 36 (36)
T d1u9pa1 12 EENGRSVNSEIYQRVMESFKKEGRI 36 (36)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHTTCC
T ss_pred HHcCcchhHHHHHHHHHHHHHccCC
Confidence 3567889999999999999988864
No 72
>d3bgea1 a.80.1.2 (A:251-434) Uncharacterized protein NTHI1458 {Haemophilus influenzae [TaxId: 727]}
Probab=32.39 E-value=60 Score=22.76 Aligned_cols=47 Identities=17% Similarity=0.193 Sum_probs=37.1
Q ss_pred HHHHHHh---CCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChh
Q 044412 203 MITSYSQ---NKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALD 249 (311)
Q Consensus 203 li~~~~~---~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~ 249 (311)
+|+++.+ ..+++-|+-.+.+|.+.|--|....=..++-|+-..|..+
T Consensus 7 ~iSA~~KSiRgSD~dAaly~larml~~GeDp~~i~RRl~~~AsEDIGlAd 56 (184)
T d3bgea1 7 LISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNAD 56 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHHHcCCChHHHHHHHHHHHHhhcCCCC
Confidence 5666655 4799999999999999998888877778888777766543
No 73
>d1sxjc1 a.80.1.1 (C:239-333) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.16 E-value=28 Score=21.22 Aligned_cols=35 Identities=3% Similarity=-0.099 Sum_probs=22.8
Q ss_pred CCchhHHHHHHHHHhcCChHHHHHHHHHHH-HcCCCC
Q 044412 274 KNLLCWNSITEALAIHGFAHEALGMFDRMT-YENVRP 309 (311)
Q Consensus 274 p~~~~~~~li~~~~~~g~~~~a~~~~~~M~-~~g~~P 309 (311)
|++.-...+++.+.+ |++++|.+.++++. +.|+-+
T Consensus 1 P~P~~I~~il~~~l~-~~f~~a~~~l~~l~~~~G~s~ 36 (95)
T d1sxjc1 1 PRPSDLKAVLKSILE-DDWGTAHYTLNKVRSAKGLAL 36 (95)
T ss_dssp CCHHHHHHHHHHHHT-SCHHHHHHHHHHHHHTTTCCH
T ss_pred CCHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHcCCCH
Confidence 344444566666664 88888888888765 557653
No 74
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.05 E-value=70 Score=22.41 Aligned_cols=9 Identities=11% Similarity=0.320 Sum_probs=3.9
Q ss_pred HHHcCCCCC
Q 044412 302 MTYENVRPN 310 (311)
Q Consensus 302 M~~~g~~P~ 310 (311)
+.+.|..||
T Consensus 122 Ll~~g~d~~ 130 (223)
T d1uoha_ 122 LLEGGANPD 130 (223)
T ss_dssp HHHTTCCTT
T ss_pred HHHCCCCCC
Confidence 334454443
No 75
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.98 E-value=57 Score=21.16 Aligned_cols=35 Identities=3% Similarity=-0.040 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHH
Q 044412 199 SWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTM 235 (311)
Q Consensus 199 ~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~ 235 (311)
.+-.|--+|.+.|++++|.+.++...+ +.|+..-.
T Consensus 75 ~lY~Lav~yyklgdy~~A~~~~~~~L~--ieP~n~qA 109 (124)
T d2pqrb1 75 CLYYLTIGCYKLGEYSMAKRYVDTLFE--HERNNKQV 109 (124)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH--HCTTCHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHc--cCCCcHHH
Confidence 344555667788888888888888876 45665433
No 76
>d1sxjd1 a.80.1.1 (D:263-353) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.97 E-value=53 Score=19.64 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=32.1
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChh
Q 044412 202 TMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALD 249 (311)
Q Consensus 202 ~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~ 249 (311)
.+++. |..|++++|.+..+++...|..+. ...+.|.+.......+.
T Consensus 8 ~il~~-~~~~~f~~a~~~i~~l~~~Gys~~-dIl~~l~~~vv~~~~i~ 53 (91)
T d1sxjd1 8 EIVEK-VKSGDFDEIKKYVNTFMKSGWSAA-SVVNQLHEYYITNDNFD 53 (91)
T ss_dssp HHHHH-HHSCCHHHHHHHHHHHHHTSCCCT-THHHHHHHHHHHCSSSC
T ss_pred HHHHH-HHcCCHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHhcCCCC
Confidence 34444 567999999999999999998776 44455555554444444
No 77
>d1h6pa_ a.146.1.1 (A:) TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.40 E-value=56 Score=23.14 Aligned_cols=57 Identities=16% Similarity=0.105 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHHHHCCCCchHHHHHHHHhcCCCchhHHHHHHHHHHhCCCCccchHHHHHHhcc
Q 044412 102 HPLQAIAFYLYMLRAEVLLTTVHGQVWKNGFSSPVFVQTAMVDNYSYSNKFFESRRVSRRLFDE 165 (311)
Q Consensus 102 ~~~~a~~~~~~m~~~~~~p~~~~~~~~~~g~~~~~~~~~~ll~~~~~~g~~~~a~~~a~~~~~~ 165 (311)
-++.|+.+++.+.+....|+..++...+ .+=-..+-.|.+.|.+++|.++.+++|..
T Consensus 86 PLESAl~v~~~I~~E~~~~~~l~e~i~~-------lik~qaV~VCmekg~Fk~A~eil~r~f~~ 142 (203)
T d1h6pa_ 86 PLESAINVLEMIKTEFTLTEAVVESSRK-------LVKEAAVIICIKNKEFEKASKILKKHMSK 142 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHH-------HHHHHHHHHHHHTTCHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHHHHhcccchhHHHHHHH-------HHHHHHHHHHHHhcchHHHHHHHHHHhcC
Confidence 4688999999888777666644444221 01123455799999999966655555553
No 78
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=27.14 E-value=38 Score=22.10 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=39.7
Q ss_pred HHHHHHHHhC-CChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChh
Q 044412 201 TTMITSYSQN-KQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALD 249 (311)
Q Consensus 201 ~~li~~~~~~-g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~ 249 (311)
..++..+... +..-.|.++++.+.+.|..++..|.---|..+...|-+.
T Consensus 19 ~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~i~~aTVYR~L~~l~e~gli~ 68 (134)
T d1mzba_ 19 VKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVV 68 (134)
T ss_dssp HHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHhCCCccHHHHHHHHHHHHhccEEE
Confidence 3566777665 457889999999999999999998777788888888665
No 79
>d1jr3a1 a.80.1.1 (A:243-368) gamma subunit {Escherichia coli [TaxId: 562]}
Probab=25.48 E-value=48 Score=21.15 Aligned_cols=35 Identities=6% Similarity=0.126 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHH
Q 044412 198 RSWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQV 233 (311)
Q Consensus 198 ~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~ 233 (311)
..+-.++++... |+..+|++.++++.+.|..|-..
T Consensus 5 ~~~~~L~~~I~~-~d~~~~L~~l~~i~~~G~d~~~~ 39 (126)
T d1jr3a1 5 DQALSLVEAMVE-ANGERVMALINEAAARGIEWEAL 39 (126)
T ss_dssp HHHHHHHHHHHH-TCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCHHHH
Confidence 344456666544 89999999999999999877543
No 80
>d1us7b_ a.205.1.1 (B:) Hsp90 co-chaperone CDC37 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.24 E-value=21 Score=25.69 Aligned_cols=33 Identities=9% Similarity=0.030 Sum_probs=19.3
Q ss_pred hccCChhHHHHhcccCCCCCeeeeeccccCCChhHHHHHHHHHHHCCC
Q 044412 71 SRFHFIDYTILVFPQMQEPNVFVYHAFSSLRHPLQAIAFYLYMLRAEV 118 (311)
Q Consensus 71 ~~~g~~~~a~~~~~~m~~~~~~~~~~~~~~~~~~~a~~~~~~m~~~~~ 118 (311)
.+.++++...+++..| .+++|...++.+...|+
T Consensus 162 fes~dld~ln~vl~~M---------------~~eeAe~h~~rcidsGl 194 (201)
T d1us7b_ 162 FDVKDVQMLQDAISKM---------------DPTDAKYHMQRCIDSGL 194 (201)
T ss_dssp -------CHHHHHTCC---------------SSSHHHHHHHHHHHHTS
T ss_pred HhcCCHHHHHHHHHhC---------------CHHHHHHHHHHHHhcCC
Confidence 4455555555555555 67888888888888886
No 81
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=23.12 E-value=68 Score=18.60 Aligned_cols=49 Identities=8% Similarity=0.154 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCChh
Q 044412 199 SWTTMITSYSQNKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGALD 249 (311)
Q Consensus 199 ~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~~ 249 (311)
=|-.++.+.+...++.+..+.++. ..|-+.+-.+++.++..+.+.|-++
T Consensus 7 RY~~ILkaia~G~rWs~IK~yle~--~~G~~I~d~~ls~lL~nL~k~~~ie 55 (73)
T d2fnaa1 7 RYLNIMRTLSKCGKWSDVKRALEL--EEGIEISDSEIYNYLTQLTKHSWII 55 (73)
T ss_dssp HHHHHHHHHTTCBCHHHHHHHHHH--HHCSCCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHccCcHHHHHHHHHH--HcCCCCChHHHHHHHHHHHHcCcee
Confidence 477788888877777777777765 3477788888999999888877664
No 82
>d1peqa1 a.98.1.1 (A:13-174) R1 subunit of ribonucleotide reductase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=22.95 E-value=37 Score=23.29 Aligned_cols=31 Identities=6% Similarity=-0.148 Sum_probs=25.4
Q ss_pred HHHHhCCChhHHHHHHHHHHhcCCCCCHHHH
Q 044412 205 TSYSQNKQFREALDAFNKTKKSGTGSDQVTM 235 (311)
Q Consensus 205 ~~~~~~g~~~~a~~~~~~m~~~g~~p~~~t~ 235 (311)
..+...|+.+.|.++++.|.+..+.|-..|+
T Consensus 122 Al~l~~~~~~~a~~~y~~~~~~~~~~aTPT~ 152 (162)
T d1peqa1 122 ALTLAQGDETLATQLTDEMLSGRFQPATPTF 152 (162)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTSEEECHHHH
T ss_pred HHHHccCcHHHHHHHHHHHHhCCeeCCCcHh
Confidence 3344568999999999999998888877774
No 83
>d1g2ha_ a.4.1.12 (A:) Transcriptional regulator TyrR, C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=21.96 E-value=63 Score=17.78 Aligned_cols=35 Identities=9% Similarity=0.216 Sum_probs=25.4
Q ss_pred chhhhHHHHHHHHhhccChhhH--------HHHHHHHHHhccC
Q 044412 22 VSFIRIHIIANQLKKCSSIKEL--------ECVYATIVKTNAN 56 (311)
Q Consensus 22 ~~~~~~~~~~~~l~~~~~~~~~--------~~l~~~m~~~g~~ 56 (311)
...+--..+..+|..||....+ ..++..|.+.|+.
T Consensus 18 ~~~~Er~~I~~aL~~~gn~~~aA~~Lgisr~tL~rKlkk~gi~ 60 (61)
T d1g2ha_ 18 IGFYEAQVLKLFYAEYPSTRKLAQRLGVSHTAIANKLKQYGIG 60 (61)
T ss_dssp CSHHHHHHHHHHHHHSCSHHHHHHHTTSCTHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHhCCC
Confidence 3334466788888888877766 5788888888864
No 84
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.61 E-value=34 Score=18.91 Aligned_cols=35 Identities=11% Similarity=0.100 Sum_probs=25.0
Q ss_pred hHHHHHHHHhhccC---hhhH--HHHHHHHHHhccCcchh
Q 044412 26 RIHIIANQLKKCSS---IKEL--ECVYATIVKTNANLDCF 60 (311)
Q Consensus 26 ~~~~~~~~l~~~~~---~~~~--~~l~~~m~~~g~~p~~~ 60 (311)
|..|...+|+..+. +.+. +.+.+.+.+.|+.||..
T Consensus 13 S~sTVSrvLn~~~~~~~vs~~tr~rV~~~a~~lgY~pn~~ 52 (59)
T d1uxda_ 13 SRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAV 52 (59)
T ss_dssp CTTHHHHHHHTCGGGTTCTTTTHHHHHHHHHHHTCCCCSC
T ss_pred CHHHHHHHHcCCCCcCcCCHHHHHHHHHHHHHHCCCcCHH
Confidence 44567788875543 3333 78999999999999864
No 85
>d3ctda1 a.80.1.2 (A:258-420) Uncharacterized protein YrvN {Prochlorococcus marinus [TaxId: 1219]}
Probab=21.09 E-value=1.2e+02 Score=20.64 Aligned_cols=46 Identities=15% Similarity=0.313 Sum_probs=36.4
Q ss_pred HHHHHHh---CCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccCCh
Q 044412 203 MITSYSQ---NKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLGAL 248 (311)
Q Consensus 203 li~~~~~---~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~~~ 248 (311)
+|+++.+ .++++-|+-.+.+|.+.|--|.-..=..++-++-..|..
T Consensus 5 ~iSA~~KSiRgSD~dAAly~larml~~Gedp~~i~RRli~~AsEDIGlA 53 (163)
T d3ctda1 5 VISAFIKSIRGSDPDATLYWLANMVEAGEDPNFIFRRLLISACEDIGLA 53 (163)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhccc
Confidence 4556555 479999999999999999888777777777777776643
No 86
>d2r9ga1 a.80.1.2 (A:238-423) Uncharacterized protein EfaeDRAFT_0938 {Enterococcus faecium [TaxId: 1352]}
Probab=20.62 E-value=1.3e+02 Score=20.93 Aligned_cols=43 Identities=12% Similarity=0.307 Sum_probs=30.4
Q ss_pred HHHHHHh---CCChhHHHHHHHHHHhcCCCCCHHHHHHHHHHHhccC
Q 044412 203 MITSYSQ---NKQFREALDAFNKTKKSGTGSDQVTMATVLSACAHLG 246 (311)
Q Consensus 203 li~~~~~---~g~~~~a~~~~~~m~~~g~~p~~~t~~~li~a~~~~~ 246 (311)
+|+++.+ .++++.|+-.+-+|.+.| .|....=..++-+.-..|
T Consensus 6 ~iSA~~KSiRgSD~daAly~larml~~G-d~~~i~RRL~~~AsEDIG 51 (186)
T d2r9ga1 6 VISAFQKSIRGSDVDAALHYLARLVEAG-DLASICRRLMVIGYEDIG 51 (186)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHhcCCHhHHHHHHHHHHHcC-CchHHHHHHHHHHHHHhh
Confidence 4555555 589999999999999999 776544445555555555
Done!