Your job contains 1 sequence.
>044416
NIYPSIQHNYSDPAYLKERAILTPKNEMVHELNEMIMNIIPGQGRTYFSSDSICKASANT
NDEDVLYPTEFLNSLKFNGIPNHDIRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWS
IRGDIISGTNIGQNVTIQRIIMSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVG
LYLSKQVFTHGQLYVAVSRVTTREGLTILNADQEVEDRTFIKNIVYKEVFQNIHTSAHKI
KVSHF
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044416
(245 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2184256 - symbol:AT5G28780 "AT5G28780" species... 557 7.0e-54 1
TAIR|locus:2098297 - symbol:AT3G51700 "AT3G51700" species... 452 9.3e-43 1
TAIR|locus:2098292 - symbol:AT3G51690 "AT3G51690" species... 446 4.0e-42 1
UNIPROTKB|F1NHS6 - symbol:PIF1 "Uncharacterized protein" ... 174 2.8e-11 1
RGD|1586053 - symbol:Pif1 "Pif1/Rrm3 DNA-helicase-like pr... 170 1.2e-10 1
RGD|1592175 - symbol:LOC690796 "similar to PIF1 homolog" ... 170 1.2e-10 1
UNIPROTKB|E2QU17 - symbol:PIF1 "Uncharacterized protein" ... 169 1.7e-10 1
UNIPROTKB|F6UY05 - symbol:PIF1 "Uncharacterized protein" ... 169 1.7e-10 1
MGI|MGI:2143057 - symbol:Pif1 "PIF1 5'-to-3' DNA helicase... 166 4.6e-10 1
ZFIN|ZDB-GENE-030131-4928 - symbol:pif1 "PIF1 5'-to-3' DN... 165 6.3e-10 1
UNIPROTKB|Q9H611 - symbol:PIF1 "ATP-dependent DNA helicas... 163 1.2e-09 1
UNIPROTKB|F1MMJ1 - symbol:PIF1 "Uncharacterized protein" ... 160 3.0e-09 1
DICTYBASE|DDB_G0277925 - symbol:pif1 "DNA helicase" speci... 151 4.1e-08 1
ASPGD|ASPL0000005281 - symbol:AN6895 species:162425 "Emer... 129 5.8e-08 2
SGD|S000004526 - symbol:PIF1 "DNA helicase" species:4932 ... 137 6.2e-08 2
DICTYBASE|DDB_G0268430 - symbol:DDB_G0268430 species:4468... 146 2.6e-07 1
POMBASE|SPBC887.14c - symbol:pfh1 "5' to 3' DNA helicase,... 140 6.1e-07 2
SGD|S000001073 - symbol:RRM3 "DNA helicase involved in rD... 139 1.2e-06 1
DICTYBASE|DDB_G0293212 - symbol:DDB_G0293212 species:4468... 107 6.3e-06 2
CGD|CAL0000026 - symbol:orf19.7538 species:5476 "Candida ... 116 3.7e-05 2
CGD|CAL0006006 - symbol:PIF1 species:5476 "Candida albica... 126 5.4e-05 1
UNIPROTKB|Q0BX56 - symbol:HNE_3264 "Putative uncharacteri... 117 0.00022 1
ZFIN|ZDB-GENE-031113-29 - symbol:hel_dr5 "helentron 5 hel... 107 0.00062 2
>TAIR|locus:2184256 [details] [associations]
symbol:AT5G28780 "AT5G28780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GO:GO:0004386 KO:K15255
InterPro:IPR010285 Pfam:PF05970 IPI:IPI00538073 RefSeq:NP_198230.1
UniGene:At.51417 ProteinModelPortal:F4KA12
EnsemblPlants:AT5G28780.1 GeneID:832993 KEGG:ath:AT5G28780
OMA:APNTHES PhylomeDB:F4KA12 Uniprot:F4KA12
Length = 337
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 116/230 (50%), Positives = 153/230 (66%)
Query: 6 IQHNYSDP--AYLKERAILTPKNEMVHELNEMIMNIIPGQGRTYFSSDSICKASANTNDE 63
+Q + S P YL ER ILTP NE V E+N +++ + G + Y SS SI KA D
Sbjct: 103 VQFSVSQPNFQYLTERGILTPHNEYVDEINAYMLSQVGGDSKEYLSSYSIGKADTIGADY 162
Query: 64 DVLYPTEFLNSLKFNGIPNHDIRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWSIRG 123
+ LY ++LNSL+F +P H I LK+G P+M +RN NQ EGLCNGTRLIVT LG+ I
Sbjct: 163 EALYHVKYLNSLEFPSLPKHKISLKKGVPIMQMRNFNQKEGLCNGTRLIVTNLGEQVIEA 222
Query: 124 DIISGTNIGQNVTIQRIIMSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVGLYL 183
I++GT+ G+ V+I R I+SP +S PF L R+Q P+ C+AM I K+QGQSLK LYL
Sbjct: 223 QIVTGTHAGKMVSIPRFILSPPQSEHPFTLRRQQFPMRVCYAMTIIKNQGQSLKSDVLYL 282
Query: 184 SKQVFTHGQLYVAVSRVTTREGLTILNADQEVEDRTFIKNIVYKEVFQNI 233
VF+H QLYVA+SRVT+ GLTIL+ D + D +KNIVYKE + ++
Sbjct: 283 PNPVFSHVQLYVALSRVTSPIGLTILHGDDQKNDE--VKNIVYKEFYNDL 330
>TAIR|locus:2098297 [details] [associations]
symbol:AT3G51700 "AT3G51700" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0004386
EMBL:AL132968 KO:K15255 InterPro:IPR010285 Pfam:PF05970
ProtClustDB:CLSN2684625 IPI:IPI00546133 PIR:T46066
RefSeq:NP_190738.1 UniGene:At.35362 ProteinModelPortal:Q9SCT8
EnsemblPlants:AT3G51700.1 GeneID:824333 KEGG:ath:AT3G51700
TAIR:At3g51700 eggNOG:NOG238239 HOGENOM:HOG000067940
InParanoid:Q9SCT8 OMA:THASPND PhylomeDB:Q9SCT8
Genevestigator:Q9SCT8 Uniprot:Q9SCT8
Length = 344
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 98/233 (42%), Positives = 149/233 (63%)
Query: 5 SIQHNYSDPAYLKERAILTPKNEMVHELNEMIMNIIPGQGRTYFSSDSICKASANTNDED 64
S +Y+ P + +ERAIL N++ E+N+ +++ + G+ + +D+I A+ ND+
Sbjct: 108 SFTESYN-PDFYQERAILCHTNDVADEINDYMLSQLQGEETKCYGADTIYPTHASPNDK- 165
Query: 65 VLYPTEFLNSLKFNGIPNHDIRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWSIRGD 124
+LYP EFLNS+K G P+ +RLK GAPVMLLR+L L GTRL +TR+ + +
Sbjct: 166 MLYPLEFLNSIKIPGFPDFKLRLKVGAPVMLLRDLAPYGWLRKGTRLQITRVETFVLEAM 225
Query: 125 IISGTNIGQNVTIQRIIMSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVGLYLS 184
II+G N G+ V I RI E+++P K+ RRQ P+ FAM I++SQ Q+L VG+YL
Sbjct: 226 IITGNNHGEKVLIPRIPSDLREAKFPIKMRRRQFPVKLAFAMTIDESQRQTLSKVGIYLP 285
Query: 185 KQVFTHGQLYVAVSRVTTREGLTILNADQEVE-DRTFIKNIVYKEVFQNIHTS 236
+Q+ HGQ YVA+S+V +R GL +L D++ + D+ KN+V+KE+F H S
Sbjct: 286 RQLLFHGQRYVAISKVKSRAGLKVLITDKDGKPDQEETKNVVFKELFTE-HLS 337
>TAIR|locus:2098292 [details] [associations]
symbol:AT3G51690 "AT3G51690" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GO:GO:0004386 KO:K15255
InterPro:IPR010285 Pfam:PF05970 EMBL:DQ132699 EMBL:DQ446757
IPI:IPI00852275 RefSeq:NP_190737.2 UniGene:At.53894
ProteinModelPortal:Q45GK3 SMR:Q45GK3 EnsemblPlants:AT3G51690.1
GeneID:824332 KEGG:ath:AT3G51690 TAIR:At3g51690 InParanoid:Q45GK3
PhylomeDB:Q45GK3 ProtClustDB:CLSN2684625 Genevestigator:Q45GK3
Uniprot:Q45GK3
Length = 331
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 94/223 (42%), Positives = 146/223 (65%)
Query: 12 DPAYLKERAILTPKNEMVHELNEMIMNIIPGQGRTYFSSDSICKASANTNDEDVLYPTEF 71
+P + + AIL +++ V ++N+ +++++PG+ + S+DSI S + ND D+ P E
Sbjct: 113 NPDFCHDSAILCHRDDDVDQINDYMLSLLPGEEKECLSTDSI---SPSPND-DMFVPLEV 168
Query: 72 LNSLKFNGIPNHDIRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWSIRGDIISGTNI 131
LNS+K G+P+ +RLK GAPVMLLR+L+ G GTRL +TRL + + II+G
Sbjct: 169 LNSIKVPGLPDFKLRLKVGAPVMLLRDLDPSRGFFTGTRLQITRLCGFLLEAMIIAGNKH 228
Query: 132 GQNVTIQRIIMSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHG 191
G+ + I RI P E+ +P ++ R Q PL FAM I++SQ +L VGLYL +QVF+HG
Sbjct: 229 GKKIWIPRIASYPTETNFPLQMRRTQYPLKLAFAMTIDESQVHTLSKVGLYLPRQVFSHG 288
Query: 192 -QLYVAVSRVTTREGLTILNADQEVEDRTFIKNIVYKEVFQNI 233
Q++VA+S+V +R GL +L D++ + KN+V+KE+FQNI
Sbjct: 289 RQMFVAISKVKSRAGLKVLITDKDGNPQEEAKNVVFKELFQNI 331
>UNIPROTKB|F1NHS6 [details] [associations]
symbol:PIF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0000784 "nuclear chromosome, telomeric region" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017116
"single-stranded DNA-dependent ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0032204 "regulation of telomere maintenance"
evidence=IEA] [GO:0033682 "ATP-dependent 5'-3' DNA/RNA helicase
activity" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0051974 "negative regulation of
telomerase activity" evidence=IEA] GO:GO:0005524 GO:GO:0000287
GO:GO:0000784 GO:GO:0042162 GO:GO:0032204 GO:GO:0043141
GO:GO:0017116 GO:GO:0051974 InterPro:IPR010285 Pfam:PF05970
OMA:TEAPRWP GO:GO:0033682 GeneTree:ENSGT00530000063561
EMBL:AADN02012742 IPI:IPI00587046 Ensembl:ENSGALT00000014698
Uniprot:F1NHS6
Length = 622
Score = 174 (66.3 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 56/137 (40%), Positives = 76/137 (55%)
Query: 85 IRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWSIRGDIISGTNIGQNVTIQRIIMSP 144
+ LK GA VML +NL+ +GL NG R +V + +G + VT Q I M
Sbjct: 455 VELKVGAQVMLAKNLDVSQGLVNGARGVVVGF-ETEQKG--LPKVRFLCGVT-QVIKME- 509
Query: 145 NESRWPFK------LNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVS 198
RW FK L+R+QLPL +A+ I+KSQG SL V + LS+ VF GQ YVA+S
Sbjct: 510 ---RWLFKGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDSVEISLSR-VFESGQAYVALS 565
Query: 199 RVTTREGLTILNADQEV 215
R + GL +L+ D +V
Sbjct: 566 RARSLAGLRVLDFDPKV 582
>RGD|1586053 [details] [associations]
symbol:Pif1 "Pif1/Rrm3 DNA-helicase-like protein" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0000784 "nuclear chromosome, telomeric region"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017116
"single-stranded DNA-dependent ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0032204 "regulation of telomere maintenance"
evidence=IEA] [GO:0033682 "ATP-dependent 5'-3' DNA/RNA helicase
activity" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0051974 "negative regulation of
telomerase activity" evidence=IEA] InterPro:IPR003840 Pfam:PF02689
RGD:1586053 GO:GO:0005524 GO:GO:0000287 GO:GO:0000784 GO:GO:0042162
GO:GO:0032204 GO:GO:0043141 eggNOG:COG0507 GO:GO:0017116
GO:GO:0051974 CTD:80119 HOGENOM:HOG000132960 HOVERGEN:HBG106706
KO:K15255 OrthoDB:EOG4S4PFR InterPro:IPR010285 Pfam:PF05970
GO:GO:0033682 EMBL:DQ489562 IPI:IPI00786829 RefSeq:NP_001037718.1
UniGene:Rn.140285 STRING:Q1HG60 PRIDE:Q1HG60 GeneID:367645
KEGG:rno:367645 UCSC:RGD:1586053 InParanoid:Q1HG60 NextBio:691419
Genevestigator:Q1HG60 Uniprot:Q1HG60
Length = 637
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 51/134 (38%), Positives = 74/134 (55%)
Query: 85 IRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRL---GKWSIRGDIISGTNIGQNVTIQRII 141
++LK GA VML++NL GL NG R +V G+ R + G I + + R
Sbjct: 469 LQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFESEGRGLPRVRFLCG--ITEVIRTDRWT 526
Query: 142 MSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVSRVT 201
+ ++ L+R+QLPL +AM I+KSQG SL V + L + VF GQ YVA+SR
Sbjct: 527 VQVTGGQY---LSRQQLPLQLAWAMSIHKSQGMSLDCVEISLGR-VFASGQAYVALSRAR 582
Query: 202 TREGLTILNADQEV 215
+ +GL +L+ D V
Sbjct: 583 SLQGLRVLDFDPTV 596
>RGD|1592175 [details] [associations]
symbol:LOC690796 "similar to PIF1 homolog" species:10116 "Rattus
norvegicus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0000784 "nuclear chromosome, telomeric region" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017116
"single-stranded DNA-dependent ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0032204 "regulation of telomere maintenance"
evidence=IEA] [GO:0033682 "ATP-dependent 5'-3' DNA/RNA helicase
activity" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0051974 "negative regulation of
telomerase activity" evidence=IEA] InterPro:IPR003840 Pfam:PF02689
RGD:1592175 GO:GO:0005524 GO:GO:0000287 GO:GO:0000784 GO:GO:0042162
GO:GO:0032204 GO:GO:0043141 GO:GO:0017116 GO:GO:0051974
InterPro:IPR010285 Pfam:PF05970 OMA:TEAPRWP GO:GO:0033682
GeneTree:ENSGT00530000063561 IPI:IPI00361363
Ensembl:ENSRNOT00000021265 Uniprot:F1M9W8
Length = 644
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 51/134 (38%), Positives = 74/134 (55%)
Query: 85 IRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRL---GKWSIRGDIISGTNIGQNVTIQRII 141
++LK GA VML++NL GL NG R +V G+ R + G I + + R
Sbjct: 476 LQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFESEGRGLPRVRFLCG--ITEVIRTDRWT 533
Query: 142 MSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVSRVT 201
+ ++ L+R+QLPL +AM I+KSQG SL V + L + VF GQ YVA+SR
Sbjct: 534 VQVTGGQY---LSRQQLPLQLAWAMSIHKSQGMSLDCVEISLGR-VFASGQAYVALSRAR 589
Query: 202 TREGLTILNADQEV 215
+ +GL +L+ D V
Sbjct: 590 SLQGLRVLDFDPTV 603
>UNIPROTKB|E2QU17 [details] [associations]
symbol:PIF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR003840
Pfam:PF02689 GO:GO:0005524 GO:GO:0004386 InterPro:IPR010285
Pfam:PF05970 Ensembl:ENSCAFT00000027084 Uniprot:E2QU17
Length = 642
Score = 169 (64.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 54/137 (39%), Positives = 76/137 (55%)
Query: 85 IRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWSIRGDIISGTNIGQNVTIQRIIMSP 144
++LK GA VML++NL GL NG R +V +G + G + VT ++I
Sbjct: 438 LQLKLGAQVMLVKNLAVSRGLVNGARGVV--VG-FETEGRGLPQVRFLCGVT--KVI--- 489
Query: 145 NESRWPFK------LNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVS 198
+ RW + L+RRQLPL +A+ I+KSQG SL V + L + VF GQ YVA+S
Sbjct: 490 HADRWTVQATGGQLLSRRQLPLQLAWAISIHKSQGMSLDCVEISLGR-VFASGQAYVALS 548
Query: 199 RVTTREGLTILNADQEV 215
R + EGL +L+ D V
Sbjct: 549 RARSLEGLRVLDFDPMV 565
>UNIPROTKB|F6UY05 [details] [associations]
symbol:PIF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR003840
Pfam:PF02689 GO:GO:0005524 GO:GO:0004386 InterPro:IPR010285
Pfam:PF05970 OMA:TEAPRWP GeneTree:ENSGT00530000063561
Ensembl:ENSCAFT00000027084 EMBL:AAEX03016209 Uniprot:F6UY05
Length = 654
Score = 169 (64.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 54/137 (39%), Positives = 76/137 (55%)
Query: 85 IRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWSIRGDIISGTNIGQNVTIQRIIMSP 144
++LK GA VML++NL GL NG R +V +G + G + VT ++I
Sbjct: 486 LQLKLGAQVMLVKNLAVSRGLVNGARGVV--VG-FETEGRGLPQVRFLCGVT--KVI--- 537
Query: 145 NESRWPFK------LNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVS 198
+ RW + L+RRQLPL +A+ I+KSQG SL V + L + VF GQ YVA+S
Sbjct: 538 HADRWTVQATGGQLLSRRQLPLQLAWAISIHKSQGMSLDCVEISLGR-VFASGQAYVALS 596
Query: 199 RVTTREGLTILNADQEV 215
R + EGL +L+ D V
Sbjct: 597 RARSLEGLRVLDFDPMV 613
>MGI|MGI:2143057 [details] [associations]
symbol:Pif1 "PIF1 5'-to-3' DNA helicase homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=ISO] [GO:0000784 "nuclear chromosome, telomeric region"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017116 "single-stranded
DNA-dependent ATP-dependent DNA helicase activity" evidence=ISO]
[GO:0032204 "regulation of telomere maintenance" evidence=ISO]
[GO:0033682 "ATP-dependent 5'-3' DNA/RNA helicase activity"
evidence=ISO] [GO:0042162 "telomeric DNA binding" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=ISO] [GO:0051974 "negative regulation of telomerase
activity" evidence=ISO] MGI:MGI:2143057 GO:GO:0005524 GO:GO:0000287
GO:GO:0000784 GO:GO:0042162 GO:GO:0032204 GO:GO:0043141
eggNOG:COG0507 GO:GO:0017116 GO:GO:0051974 CTD:80119
HOGENOM:HOG000132960 HOVERGEN:HBG106706 KO:K15255 OrthoDB:EOG4S4PFR
InterPro:IPR010285 Pfam:PF05970 OMA:TEAPRWP GO:GO:0033682
EMBL:AY498715 EMBL:AY100322 EMBL:AY100323 EMBL:AK028460
EMBL:AK049353 EMBL:BC046611 IPI:IPI00453498 IPI:IPI00457588
RefSeq:NP_766041.1 UniGene:Mm.211032 ProteinModelPortal:Q80SX8
SMR:Q80SX8 STRING:Q80SX8 PhosphoSite:Q80SX8 PRIDE:Q80SX8
Ensembl:ENSMUST00000047099 Ensembl:ENSMUST00000131483
Ensembl:ENSMUST00000134538 GeneID:208084 KEGG:mmu:208084
UCSC:uc009qdp.1 GeneTree:ENSGT00530000063561 InParanoid:Q80SX8
NextBio:372132 Bgee:Q80SX8 Genevestigator:Q80SX8 Uniprot:Q80SX8
Length = 650
Score = 166 (63.5 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 50/134 (37%), Positives = 74/134 (55%)
Query: 85 IRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRL---GKWSIRGDIISGTNIGQNVTIQRII 141
++LK GA VML++NL GL NG R +V G+ R + G I + + R
Sbjct: 482 LQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFESEGRGLPRVRFLCG--ITEVIRTDRWT 539
Query: 142 MSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVSRVT 201
+ ++ L+R+QLPL +A+ I+KSQG SL V + L + VF GQ YVA+SR
Sbjct: 540 VQVTGGQY---LSRQQLPLQLAWAISIHKSQGMSLDCVEISLGR-VFASGQAYVALSRAR 595
Query: 202 TREGLTILNADQEV 215
+ +GL +L+ D V
Sbjct: 596 SLQGLRVLDFDPTV 609
>ZFIN|ZDB-GENE-030131-4928 [details] [associations]
symbol:pif1 "PIF1 5'-to-3' DNA helicase homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-030131-4928
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0507 EMBL:BC045956 IPI:IPI00484771 RefSeq:NP_942102.1
UniGene:Dr.80157 STRING:Q7ZV90 PRIDE:Q7ZV90 GeneID:326729
KEGG:dre:326729 CTD:80119 HOGENOM:HOG000132960 HOVERGEN:HBG106706
InParanoid:Q7ZV90 KO:K15255 OrthoDB:EOG4S4PFR NextBio:20809705
ArrayExpress:Q7ZV90 InterPro:IPR010285 Pfam:PF05970 Uniprot:Q7ZV90
Length = 639
Score = 165 (63.1 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 55/154 (35%), Positives = 79/154 (51%)
Query: 85 IRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRL--GKWSI-RGDIISGTNIGQNVTIQRII 141
++LK GA VML +NL+ GL NG R +V G + R + G V + +
Sbjct: 473 LQLKVGAQVMLTKNLDVQRGLVNGARGVVVDFQPGNQGLPRVRFLCGA-----VEVMK-- 525
Query: 142 MSPNESRWPFK------LNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYV 195
RW FK L+R+QLPL +A+ I+KSQG +L V + L++ VF GQ YV
Sbjct: 526 ----RERWMFKAPGGLYLSRQQLPLKLAWAISIHKSQGMTLDCVEISLAR-VFESGQAYV 580
Query: 196 AVSRVTTREGLTILNADQEVEDRTFIKNIVYKEV 229
A+SR + EGL +++ D V I YK +
Sbjct: 581 ALSRARSLEGLRVMDFDPRVVQANQDVLIFYKRL 614
>UNIPROTKB|Q9H611 [details] [associations]
symbol:PIF1 "ATP-dependent DNA helicase PIF1" species:9606
"Homo sapiens" [GO:0000784 "nuclear chromosome, telomeric region"
evidence=IDA] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=IDA] [GO:0032204
"regulation of telomere maintenance" evidence=IDA] [GO:0042162
"telomeric DNA binding" evidence=IDA] [GO:0051974 "negative
regulation of telomerase activity" evidence=IDA] [GO:0000287
"magnesium ion binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0033682 "ATP-dependent 5'-3' DNA/RNA
helicase activity" evidence=IDA] InterPro:IPR003840 Pfam:PF02689
GO:GO:0005524 GO:GO:0000287 GO:GO:0000784 GO:GO:0042162
GO:GO:0032204 GO:GO:0043141 eggNOG:COG0507 GO:GO:0017116
GO:GO:0051974 CTD:80119 HOGENOM:HOG000132960 HOVERGEN:HBG106706
KO:K15255 OrthoDB:EOG4S4PFR InterPro:IPR010285 Pfam:PF05970
EMBL:DQ437529 EMBL:AY498716 EMBL:AB185926 EMBL:AB185927
EMBL:AK026345 IPI:IPI00017925 IPI:IPI00746514 IPI:IPI00793711
RefSeq:NP_079325.2 UniGene:Hs.112160 ProteinModelPortal:Q9H611
SMR:Q9H611 STRING:Q9H611 PhosphoSite:Q9H611 DMDM:152031656
PRIDE:Q9H611 Ensembl:ENST00000268043 Ensembl:ENST00000333425
Ensembl:ENST00000559239 GeneID:80119 KEGG:hsa:80119 UCSC:uc002ans.2
UCSC:uc002anu.3 GeneCards:GC15M065107 H-InvDB:HIX0017918
HGNC:HGNC:26220 HPA:CAB018701 MIM:610953 neXtProt:NX_Q9H611
PharmGKB:PA162399475 OMA:TEAPRWP GenomeRNAi:80119 NextBio:70350
ArrayExpress:Q9H611 Bgee:Q9H611 CleanEx:HS_PIF1
Genevestigator:Q9H611 GermOnline:ENSG00000140451 GO:GO:0033682
Uniprot:Q9H611
Length = 641
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 51/134 (38%), Positives = 75/134 (55%)
Query: 85 IRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWSIRGDIISGTNIGQNVTIQRIIMSP 144
++LK GA VML++NL+ GL NG R +V +G + G + VT +I
Sbjct: 473 LQLKLGAQVMLVKNLSVSRGLVNGARGVV--VG-FEAEGRGLPQVRFLCGVT--EVI--- 524
Query: 145 NESRWPFK------LNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVS 198
+ RW + L+R+QLPL +AM I+KSQG +L V + L + VF GQ YVA+S
Sbjct: 525 HADRWTVQATGGQLLSRQQLPLQLAWAMSIHKSQGMTLDCVEISLGR-VFASGQAYVALS 583
Query: 199 RVTTREGLTILNAD 212
R + +GL +L+ D
Sbjct: 584 RARSLQGLRVLDFD 597
>UNIPROTKB|F1MMJ1 [details] [associations]
symbol:PIF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051974 "negative regulation of telomerase activity"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0042162 "telomeric DNA binding"
evidence=IEA] [GO:0033682 "ATP-dependent 5'-3' DNA/RNA helicase
activity" evidence=IEA] [GO:0032204 "regulation of telomere
maintenance" evidence=IEA] [GO:0017116 "single-stranded
DNA-dependent ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000784 "nuclear
chromosome, telomeric region" evidence=IEA] [GO:0000287 "magnesium
ion binding" evidence=IEA] GO:GO:0005524 GO:GO:0000287
GO:GO:0000784 GO:GO:0042162 GO:GO:0032204 GO:GO:0043141
GO:GO:0017116 GO:GO:0051974 InterPro:IPR010285 Pfam:PF05970
OMA:TEAPRWP GO:GO:0033682 GeneTree:ENSGT00530000063561
EMBL:DAAA02028729 IPI:IPI00694264 Ensembl:ENSBTAT00000010047
Uniprot:F1MMJ1
Length = 653
Score = 160 (61.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 52/137 (37%), Positives = 75/137 (54%)
Query: 85 IRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWSIRGDIISGTNIGQNVTIQRIIMSP 144
++LK GA VML++NL GL NG R +V +G + G + VT +I +
Sbjct: 485 LQLKLGAQVMLVKNLAVSRGLVNGARGVV--VG-FEAEGRGLPQVRFLCGVT--EVIRA- 538
Query: 145 NESRWPFK------LNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVS 198
RW + L+R+QLPL +A+ I+KSQG SL V + L + VF GQ YVA+S
Sbjct: 539 --DRWTVQTTGGQLLSRQQLPLQLAWAISIHKSQGMSLDCVEMSLGR-VFASGQAYVALS 595
Query: 199 RVTTREGLTILNADQEV 215
R + +GL +L+ D V
Sbjct: 596 RARSLQGLRVLDFDPMV 612
>DICTYBASE|DDB_G0277925 [details] [associations]
symbol:pif1 "DNA helicase" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0277925 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0051276
GO:GO:0003678 eggNOG:COG0507 KO:K15255 InterPro:IPR010285
Pfam:PF05970 ProtClustDB:CLSZ2429302 RefSeq:XP_642006.1
ProteinModelPortal:Q54Z42 STRING:Q54Z42 EnsemblProtists:DDB0238069
GeneID:8623826 KEGG:ddi:DDB_G0277925 OMA:RSINNSH Uniprot:Q54Z42
Length = 669
Score = 151 (58.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/162 (30%), Positives = 86/162 (53%)
Query: 84 DIRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWSIRGDIISGTNIGQNVTI------ 137
++ LK GA V+LLR + + +GL NG+R +V K + + Q + +
Sbjct: 508 NLTLKVGAQVVLLRKIEKGDGLVNGSRGVVVDFVKARVSRKNNKFHKVNQYLPVVLFNDG 567
Query: 138 QRIIMSPNE-SRWPF-KLNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYV 195
Q++ + P+E W K R Q+PL +A+ I+++QG +L V LS+ F GQ YV
Sbjct: 568 QKVTIPPSEWCVWSEEKAYRNQIPLKLAWALTIHRAQGMTLDKVECELSR-TFASGQGYV 626
Query: 196 AVSRVTTREGLTILNADQEVEDRTFIKNIVY-KEVFQNIHTS 236
A+SRV + GL + + + +T K + + K++ ++I+ S
Sbjct: 627 ALSRVKSLAGLHLKSLNTPAL-KTSPKVVTFNKKIIRSINNS 667
>ASPGD|ASPL0000005281 [details] [associations]
symbol:AN6895 species:162425 "Emericella nidulans"
[GO:0006260 "DNA replication" evidence=IEA] [GO:0097046
"replication fork progression beyond termination site"
evidence=IEA] [GO:0000002 "mitochondrial genome maintenance"
evidence=IEA] [GO:0005724 "nuclear telomeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
EMBL:BN001301 GO:GO:0004386 EMBL:AACD01000113 eggNOG:COG0507
HOGENOM:HOG000132960 KO:K15255 InterPro:IPR010285 Pfam:PF05970
OrthoDB:EOG4004SD RefSeq:XP_664499.1 ProteinModelPortal:Q5AXT5
STRING:Q5AXT5 EnsemblFungi:CADANIAT00007697 GeneID:2870605
KEGG:ani:AN6895.2 OMA:YFDENDF Uniprot:Q5AXT5
Length = 661
Score = 129 (50.5 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 155 RRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVSRVTTREGLTILNADQE 214
R+Q+PL +A+ I+K+QGQ+L+ V + L K VF GQ YVA+SR T++ GL +L D
Sbjct: 550 RQQVPLILAWALSIHKAQGQTLQRVKVDLGK-VFEKGQAYVALSRATSKAGLQVLRFDPR 608
Query: 215 ---VEDRT--FIKNIVY 226
V + F +N+V+
Sbjct: 609 KVMVHPKVIEFYRNLVH 625
Score = 63 (27.2 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 59 NTNDEDVLYPTEFLNSLKFNGIPNHDIRLKEGAPVMLLRNLNQIEGLCNGT 109
N D + +F L N + I LK+G+ VML++N+ + L NG+
Sbjct: 408 NAVDSGTIQDIQFREKLLSNCMAPQTIHLKKGSQVMLIKNME--DTLVNGS 456
>SGD|S000004526 [details] [associations]
symbol:PIF1 "DNA helicase" species:4932 "Saccharomyces
cerevisiae" [GO:0006310 "DNA recombination" evidence=IEA;IMP]
[GO:0010521 "telomerase inhibitor activity" evidence=IDA;IMP]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0000723 "telomere maintenance"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IC] [GO:0051276
"chromosome organization" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IDA]
[GO:0032211 "negative regulation of telomere maintenance via
telomerase" evidence=IMP;IDA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IMP] SGD:S000004526 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0031966 GO:GO:0003677
GO:GO:0006281 EMBL:BK006946 GO:GO:0032211 GO:GO:0006310
GO:GO:0000002 GO:GO:0003678 GO:GO:0000723 GO:GO:0010521 EMBL:Z38114
EMBL:Z46729 eggNOG:COG0507 KO:K15255 InterPro:IPR010285
Pfam:PF05970 GeneTree:ENSGT00530000063561 OrthoDB:EOG4004SD
EMBL:X05342 PIR:A29457 RefSeq:NP_013650.1 ProteinModelPortal:P07271
SMR:P07271 DIP:DIP-4448N MINT:MINT-496209 STRING:P07271
PaxDb:P07271 EnsemblFungi:YML061C GeneID:854941 KEGG:sce:YML061C
OMA:RVQLPLM NextBio:977992 Genevestigator:P07271 GermOnline:YML061C
Uniprot:P07271
Length = 859
Score = 137 (53.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 145 NESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVSRVTTRE 204
+E+ P ++R QLPL +++ I+KSQGQ+L V + L ++VF GQ YVA+SR +RE
Sbjct: 682 DENEKPL-VSRVQLPLMLAWSLSIHKSQGQTLPKVKVDL-RRVFEKGQAYVALSRAVSRE 739
Query: 205 GLTILNADQ 213
GL +LN D+
Sbjct: 740 GLQVLNFDR 748
Score = 56 (24.8 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 59 NTNDEDVLYPTEFLNSLKFNGIPNHDIRLKEGAPVMLLRNLNQIEGLCNGT 109
N D L E L N + ++ LK GA VM+++NL+ L NG+
Sbjct: 487 NAIDGGALEDEELKERLLQNFLAPKELHLKVGAQVMMVKNLDAT--LVNGS 535
>DICTYBASE|DDB_G0268430 [details] [associations]
symbol:DDB_G0268430 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268430 GO:GO:0005524
EMBL:AAFI02000003 GO:GO:0017111 eggNOG:COG0507 KO:K15255
InterPro:IPR010285 Pfam:PF05970 ProtClustDB:CLSZ2429302
RefSeq:XP_647539.1 ProteinModelPortal:Q55FJ4
EnsemblProtists:DDB0202221 GeneID:8616346 KEGG:ddi:DDB_G0268430
InParanoid:Q55FJ4 Uniprot:Q55FJ4
Length = 933
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 60/196 (30%), Positives = 95/196 (48%)
Query: 21 ILTPKNEMVHELNEMIMNIIPGQGRTYFSSDSICKASANTNDEDVLYPTEFLNSLKFNGI 80
IL P + V+ NE ++I+ + R Y AN N + + +SLK
Sbjct: 735 ILYPHRDKVNNENEHRLSILNTEARIY---------KANDN-----FQPNYADSLKNCPA 780
Query: 81 PNHDIRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWSIRGD------IISGTNIGQN 134
P + LK GA V+L++NL+ L NG+R +V S+ I+ TN G
Sbjct: 781 PE-TLTLKIGAQVILIKNLDMENELVNGSRGVVIDWTDSSLSPSKEESLPIVKFTN-GLT 838
Query: 135 VTIQRIIMSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLY 194
I R + NE +RRQ+PL +A+ I+KSQG ++ + + L +F +GQ Y
Sbjct: 839 RIIGREVWR-NEFGEIVISSRRQIPLMLAWALSIHKSQGMTIDKLVINLDG-IFENGQTY 896
Query: 195 VAVSRVTTREGLTILN 210
VA+SR + GL +++
Sbjct: 897 VALSRSSGLNGLQLVS 912
>POMBASE|SPBC887.14c [details] [associations]
symbol:pfh1 "5' to 3' DNA helicase, involved in DNA
recombination and repair Pif1" species:4896 "Schizosaccharomyces
pombe" [GO:0000723 "telomere maintenance" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006281
"DNA repair" evidence=IMP] [GO:0006310 "DNA recombination"
evidence=ISO] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=IMP] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IGI] [GO:0043137 "DNA replication,
removal of RNA primer" evidence=IGI] [GO:0043141 "ATP-dependent
5'-3' DNA helicase activity" evidence=IDA] [GO:0043504
"mitochondrial DNA repair" evidence=IMP] InterPro:IPR003593
InterPro:IPR003840 Pfam:PF02689 SMART:SM00382 PomBase:SPBC887.14c
GO:GO:0005739 GO:GO:0005524 GO:GO:0005730 GO:GO:0003677
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006310 GO:GO:0010389
GO:GO:0000723 GO:GO:0043137 GO:GO:0043504 GO:GO:0043141
eggNOG:COG0507 HOGENOM:HOG000132960 KO:K15255 InterPro:IPR010285
Pfam:PF05970 EMBL:AF074944 PIR:T40739 PIR:T47241 RefSeq:NP_596488.1
STRING:Q9UUA2 EnsemblFungi:SPBC887.14c.1 GeneID:2541213
KEGG:spo:SPBC887.14c OrthoDB:EOG4004SD NextBio:20802325
Uniprot:Q9UUA2
Length = 805
Score = 140 (54.3 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 35/94 (37%), Positives = 55/94 (58%)
Query: 118 KWS-IRGDIISGTNIGQNVTIQRIIMSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSL 176
KW +R + +G + + +QR + + +R Q+PL +A+ I+K+QGQ+L
Sbjct: 672 KWPLVRFKLPNGGE--RTIVVQRETWNIELPNGEVQASRSQIPLILAYAISIHKAQGQTL 729
Query: 177 KHVGLYLSKQVFTHGQLYVAVSRVTTREGLTILN 210
V + L + VF GQ YVA+SR TT+EGL +LN
Sbjct: 730 DRVKVDLGR-VFEKGQAYVALSRATTQEGLQVLN 762
Score = 42 (19.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 62 DEDVLYPTEFLNSLKFNGIPNHDIRLKEGAPVMLLRNLNQIEGLCNGT 109
D + EF + L + + LK A VML++N++ + L NG+
Sbjct: 565 DSGTVRDKEFRDRLLQGCMAPATLVLKVNAQVMLIKNID--DQLVNGS 610
>SGD|S000001073 [details] [associations]
symbol:RRM3 "DNA helicase involved in rDNA replication and
Ty1 transposition" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IGI;IMP;IPI] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000781 "chromosome,
telomeric region" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0097046
"replication fork progression beyond termination site"
evidence=IMP] [GO:0005657 "replication fork" evidence=IMP;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI]
[GO:0005724 "nuclear telomeric heterochromatin" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=ISS;IMP] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
SGD:S000001073 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
EMBL:BK006934 GO:GO:0006281 EMBL:U00062 GO:GO:0000002 GO:GO:0004003
GO:GO:0005724 GO:GO:0005657 eggNOG:COG0507 HOGENOM:HOG000132960
KO:K15255 InterPro:IPR010285 Pfam:PF05970
GeneTree:ENSGT00530000063561 PIR:S46744 RefSeq:NP_011896.1
ProteinModelPortal:P38766 SMR:P38766 DIP:DIP-2858N IntAct:P38766
STRING:P38766 PaxDb:P38766 PRIDE:P38766 EnsemblFungi:YHR031C
GeneID:856426 KEGG:sce:YHR031C CYGD:YHR031c OMA:ILAWAMS
OrthoDB:EOG486CNB NextBio:982006 Genevestigator:P38766
GermOnline:YHR031C GO:GO:0097046 Uniprot:P38766
Length = 723
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/227 (23%), Positives = 110/227 (48%)
Query: 12 DPAYLKERAILTPKNEMVHEL-NEMIMNIIPGQ-GRT-YFSSDSIC---KASANTNDEDV 65
D + + E+ + ++ V L N+ + ++ G G+ +F ++S+ K D++V
Sbjct: 498 DSSLMVEKVVALKEDAQVMMLKNKPDVELVNGSLGKVLFFVTESLVVKMKEIYKIVDDEV 557
Query: 66 LYPTEFLNSLKFNGIPNHDIRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRLGKWS-IRGD 124
+ ++ + N + ++ L L +++ L N I K+ +R
Sbjct: 558 VMDMRLVSRVIGNPLLKESKEFRQDLNARPLARLERLKILINYAVKISPHKEKFPYVRWT 617
Query: 125 IISGTNIGQNVTIQRI-IMSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVGLYL 183
+ I + + +R I P E+ L R Q+PL C+A+ I+K+QGQ+++ + + L
Sbjct: 618 VGKNKYIHELMVPERFPIDIPREN---VGLERTQIPLMLCWALSIHKAQGQTIQRLKVDL 674
Query: 184 SKQVFTHGQLYVAVSRVTTREGLTILNADQ-EVEDRTFIKNIVYKEV 229
+++F GQ+YVA+SR T + L +LN D ++ +K+ YK +
Sbjct: 675 -RRIFEAGQVYVALSRAVTMDTLQVLNFDPGKIRTNERVKDF-YKRL 719
>DICTYBASE|DDB_G0293212 [details] [associations]
symbol:DDB_G0293212 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003613 Pfam:PF04564
SMART:SM00382 SMART:SM00504 dictyBase:DDB_G0293212 GO:GO:0005524
EMBL:AAFI02000200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0017111 GO:GO:0004842 GO:GO:0000151 eggNOG:COG0507
InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_629245.1
ProteinModelPortal:Q54C21 EnsemblProtists:DDB0191825 GeneID:8629127
KEGG:ddi:DDB_G0293212 InParanoid:Q54C21 OMA:RNANQEN
ProtClustDB:CLSZ2429302 Uniprot:Q54C21
Length = 846
Score = 107 (42.7 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 152 KLNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVSRVTTREGLTIL 209
++ R Q+PL +A+ +K QG +L + L+K VF HGQ YVA+SR+ + EGL I+
Sbjct: 596 RIYRIQIPLKLAWAVTFHKIQGVTLDCAQISLNK-VFEHGQSYVALSRIKSLEGLQIV 652
Score = 71 (30.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 21 ILTPKNEMVHELNEMIMNIIPGQGRTYFSSDSICKASANTNDEDVLYPTE--FLNSLKFN 78
IL N V E+N+ + I + + + D N D+ + + F NS K +
Sbjct: 428 ILYTTNNKVEEMNQKYLEDINREQFEFIALDRNANQE-NIQDQKKINHLQSIFENSRK-S 485
Query: 79 GIPNHDIRLKEGAPVMLLRNLNQIEGLCNGTRLIV 113
+ LK GA VML+RN++ L NG+R +V
Sbjct: 486 CLAASRFNLKSGAQVMLVRNISPT--LVNGSRGVV 518
>CGD|CAL0000026 [details] [associations]
symbol:orf19.7538 species:5476 "Candida albicans" [GO:0005724
"nuclear telomeric heterochromatin" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0097046 "replication fork progression beyond
termination site" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003840
Pfam:PF02689 SMART:SM00382 CGD:CAL0000026 GO:GO:0005524
GO:GO:0004386 EMBL:AACQ01000039 eggNOG:COG0507 KO:K15255
InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_718694.1
ProteinModelPortal:Q5AAF1 STRING:Q5AAF1 GeneID:3639673
KEGG:cal:CaO19.7538 Uniprot:Q5AAF1
Length = 618
Score = 116 (45.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 153 LNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVSRVTTREGLTI 208
L R QLPL +AM I+KSQGQ+L V + L + F GQ YVA+SR T+++ L +
Sbjct: 540 LAREQLPLLLAWAMSIHKSQGQTLDRVRVDLGRS-FADGQAYVALSRATSKDRLEL 594
Score = 50 (22.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 85 IRLKEGAPVMLLRNLNQIEGLCNGTRLIV 113
+RLKEGA VM + +N E + NG+ +V
Sbjct: 397 LRLKEGAQVMNI--VNYSEDIVNGSLGVV 423
>CGD|CAL0006006 [details] [associations]
symbol:PIF1 species:5476 "Candida albicans" [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0000002 "mitochondrial
genome maintenance" evidence=IEA] [GO:0032211 "negative regulation
of telomere maintenance via telomerase" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IEA] [GO:0010521 "telomerase inhibitor
activity" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 CGD:CAL0006006
GO:GO:0005524 GO:GO:0017111 EMBL:AACQ01000160 eggNOG:COG0507
KO:K15255 InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_712340.1
ProteinModelPortal:Q59RQ0 STRING:Q59RQ0 GeneID:3646054
KEGG:cal:CaO19.6133 Uniprot:Q59RQ0
Length = 906
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 51/181 (28%), Positives = 86/181 (47%)
Query: 46 TYFSSDSICKASANTNDEDVLYPTEFLNSLKFNGIPNHDIRLKEGAP----VMLLRNLNQ 101
TY S+S S T+DE LN FN +KE AP V+ L+Q
Sbjct: 686 TYMKSESKENPSTETSDE-----VSGLNDYIFNDFQKPKKVVKEDAPIAEQVLFTGQLSQ 740
Query: 102 -IEGLCNGTRL---IVTRLGK-WSIRGDIISGTNIGQNVTIQRIIMSPNESRWPFK---- 152
+E ++ + L K + + + + +T + +++ P + W +
Sbjct: 741 KVEDESESSKRKSKLKDDLMKDYKNKKYPLVKFLLPDGITFRTVVVEPEQ--WTTEDEDG 798
Query: 153 ---LNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYVAVSRVTTREGLTIL 209
++R Q PL +++ I+KSQGQ+L V + + K++F +GQ YVA+SR +R GL +L
Sbjct: 799 TVLVSRIQFPLILAWSLSIHKSQGQTLSKVVVDM-KKIFENGQAYVALSRAVSRAGLQVL 857
Query: 210 N 210
N
Sbjct: 858 N 858
>UNIPROTKB|Q0BX56 [details] [associations]
symbol:HNE_3264 "Putative uncharacterized protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001452 InterPro:IPR003593 SMART:SM00326 SMART:SM00382
GO:GO:0000166 GO:GO:0017111 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG0507 HOGENOM:HOG000132960 InterPro:IPR010285 Pfam:PF05970
RefSeq:YP_761937.1 STRING:Q0BX56 GeneID:4290168 KEGG:hne:HNE_3264
PATRIC:32219409 OMA:ANIEPAD ProtClustDB:CLSK958558
BioCyc:HNEP228405:GI69-3266-MONOMER Uniprot:Q0BX56
Length = 445
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 53/193 (27%), Positives = 84/193 (43%)
Query: 21 ILTPKNEMVHELNEMIMNIIPGQGRTYFSSDSICKASANTNDEDVLYPTEFLNSLKFNGI 80
+LTP N +N+ + + G+ +++ A+ ++ +PTE
Sbjct: 231 VLTPNNANAFRINQNRLAGLKGERKSF-------PATVQGQFDEKSFPTEM--------- 274
Query: 81 PNHDIRLKEGAPVMLLRNLNQIEGL-CNGTRLIV----TRLGKWSIRGDIISGTNIGQNV 135
D+ L+ GA VML++N EG NG+ IV +R SI G +
Sbjct: 275 ---DLELRVGARVMLIKN--DPEGRWVNGSLGIVEGFTSRTVIVSIDGRVYEIEPTAWEK 329
Query: 136 TIQRIIMSPNESRWPFKLNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQLYV 195
M + + +Q+PL +A+ I+K+QG +L V + +F HGQ YV
Sbjct: 330 YRYDFEMDSKKVKREVVGTFKQVPLRLAYAVTIHKAQGLTLDKVFIDFDSGMFAHGQAYV 389
Query: 196 AVSRVTTREGLTI 208
A SR T EGL I
Sbjct: 390 AFSRARTLEGLEI 402
>ZFIN|ZDB-GENE-031113-29 [details] [associations]
symbol:hel_dr5 "helentron 5 helitron-like transposon
replicase/helicase/endonuclease" species:7955 "Danio rerio"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 Pfam:PF02338
ZFIN:ZDB-GENE-031113-29 GO:GO:0005524 GO:GO:0004386 GO:GO:0004519
InterPro:IPR003323 PROSITE:PS50802 InterPro:IPR005135
SUPFAM:SSF56219 eggNOG:COG0507 InterPro:IPR010285 Pfam:PF05970
InterPro:IPR025476 Pfam:PF14214 EMBL:BK001161 IPI:IPI00494861
ProteinModelPortal:Q7M558 HOVERGEN:HBG066179 InParanoid:Q7M558
OMA:HKERVKN OrthoDB:EOG40ZR0D Uniprot:Q7M558
Length = 3007
Score = 107 (42.7 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 36/100 (36%), Positives = 54/100 (54%)
Query: 135 VTIQRIIMSPNESRWPFK-LNRRQLPLAPCFAMMINKSQGQSLKHVGLYLSKQVFTHGQL 193
V I + + P E R K RRQ PL +A ++K QG S+ + + L K++F GQ
Sbjct: 2662 VEIGSVGIKPEEERVNNKGALRRQFPLKLAWACTVHKVQGISVDNAVVCL-KKIFAPGQA 2720
Query: 194 YVAVSRVTTREGLTILNADQEVEDRTFIKNIVYKEVFQNI 233
YVA+SRV + GL I D E E + K+ + K+ Q++
Sbjct: 2721 YVALSRVRSLSGLII--EDFE-EKAIYCKDSI-KDAIQSM 2756
Score = 63 (27.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 25/94 (26%), Positives = 43/94 (45%)
Query: 24 PKNEMVHELN-EMIMNIIPGQGRTYFSSDSICKASANTNDEDVLYPTEFLNSLKFNGIPN 82
P N+ V+E N + + P +F D+ + + N L ++ FN
Sbjct: 2539 PTNKQVNEHNLQQLFKSCP----EHFEIDA--QDFVHNNKTGKLELKNGHHAKSFNTCLE 2592
Query: 83 HDIRLKEGAPVMLLRNLNQIEGLCNGTRLIVTRL 116
+ L +GA VML +N++ ++GL NG VT +
Sbjct: 2593 ETLFLGDGARVMLSKNVDVMDGLVNGVCGTVTHV 2626
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 245 245 0.00099 113 3 11 22 0.42 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 599 (64 KB)
Total size of DFA: 181 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.96u 0.07s 20.03t Elapsed: 00:00:03
Total cpu time: 19.96u 0.07s 20.03t Elapsed: 00:00:05
Start: Thu May 9 16:34:11 2013 End: Thu May 9 16:34:16 2013