Citrus Sinensis ID: 044418

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40-
Protein Sequence
MQRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF
Secondary Structure (PSIPRED)
cEEEEEEccccccccccccccccccEEEEEEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccHHccccccccccccccEEEEEEEEEEcccccc
Coil and Loop (DISEMBL)
mqrllivppelaygskgvqeippnatiEIDVELLAIKQSPF
Flexible Loop (DISEMBL)
mqrllivppelaygskgvqeippnaTIEIDVELLAIKQSPF
Low Complexity Region (SEG)
MQRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF
Disordered region (IsUnstruct)
*****IVP*ELAYGSKGVQEIPPNATIEIDVELLAI*****
Disordered Region (DISOPRED)
MQRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQ***
Disordered Region (DISEMBL)
MQRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF
Disordered Region (DISPRO)
*QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQ***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	41	2.2.26 [Sep-21-2011]
Q9SR70	230	Peptidyl-prolyl cis-trans	yes	no	0.975	0.173	0.875	4e-14
Q9LM71	232	Peptidyl-prolyl cis-trans	no	no	0.853	0.150	0.571	9e-06
P45523	270	FKBP-type peptidyl-prolyl	N/A	no	0.878	0.133	0.611	1e-05
P65764	270	FKBP-type peptidyl-prolyl	yes	no	0.878	0.133	0.611	1e-05
P65765	270	FKBP-type peptidyl-prolyl	N/A	no	0.878	0.133	0.611	1e-05
O54998	218	Peptidyl-prolyl cis-trans	yes	no	0.951	0.178	0.463	0.0001
Q6FSC1	136	FK506-binding protein 2 O	yes	no	0.926	0.279	0.538	0.0002
Q5R941	211	Peptidyl-prolyl cis-trans	yes	no	0.951	0.184	0.435	0.0003
Q9NWM8	211	Peptidyl-prolyl cis-trans	yes	no	0.951	0.184	0.435	0.0003
P59024	211	Peptidyl-prolyl cis-trans	no	no	0.951	0.184	0.435	0.0006

>sp|Q9SR70|FK164_ARATH Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-4 PE=1 SV=1

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRL+IVPPELAYG KGVQEIPPNATIE+D+ELL+IKQSPF
Sbjct: 182 QRLVIVPPELAYGKKGVQEIPPNATIELDIELLSIKQSPF 221

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 2EC: .EC: 1EC: .EC: 8

>sp|Q9LM71|FKB18_ARATH Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana GN=FKBP18 PE=1 SV=2

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 27/35 (77%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAI 36
           +R +IVPPE  YG KG+ EIPP AT E+++ELL +
Sbjct: 191 KRTVIVPPEAGYGQKGMNEIPPGATFELNIELLRV 225

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P45523|FKBA_ECOLI FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli (strain K12) GN=fkpA PE=1 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 5   LIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
           L++PPELAYG  GV  IPPN+T+  DVELL +K +P
Sbjct: 217 LVIPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAP 252

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Escherichia coli (strain K12) (taxid: 83333)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P65764|FKBA_ECOL6 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fkpA PE=3 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 5   LIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
           L++PPELAYG  GV  IPPN+T+  DVELL +K +P
Sbjct: 217 LVIPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAP 252

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P65765|FKBA_ECO57 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O157:H7 GN=fkpA PE=3 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 5   LIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
           L++PPELAYG  GV  IPPN+T+  DVELL +K +P
Sbjct: 217 LVIPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAP 252

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Escherichia coli O157:H7 (taxid: 83334)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|O54998|FKBP7_MOUSE Peptidyl-prolyl cis-trans isomerase FKBP7 OS=Mus musculus GN=Fkbp7 PE=1 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 2/41 (4%)

Query: 2   QRLLIVPPELAYGSKGVQE--IPPNATIEIDVELLAIKQSP 40
           +R +I+PP  AYG +G  E  IPPNAT+  ++EL A+ + P
Sbjct: 104 KRKVIIPPSFAYGKEGYAEGKIPPNATLMFEIELYAVTKGP 144

PPIases accelerate the folding of proteins during protein synthesis.

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q6FSC1|FKBP2_CANGA FK506-binding protein 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FPR2 PE=3 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 29/39 (74%), Gaps = 1/39 (2%)

Query: 2   QRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIKQS 39
           +R L +PPELAYGS+G    IPPNA ++ DVEL+ I ++
Sbjct: 98  KRTLHIPPELAYGSRGAGGVIPPNAVLDFDVELVDIARN 136

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q5R941|FKB14_PONAB Peptidyl-prolyl cis-trans isomerase FKBP14 OS=Pongo abelii GN=FKBP14 PE=2 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
           +R LI+PP L YG +G  +IPP +T+  +++LL I+  P
Sbjct: 100 KRKLIIPPALGYGKEGKGKIPPESTLIFNIDLLEIRNGP 138

PPIases accelerate the folding of proteins during protein synthesis.

Pongo abelii (taxid: 9601)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q9NWM8|FKB14_HUMAN Peptidyl-prolyl cis-trans isomerase FKBP14 OS=Homo sapiens GN=FKBP14 PE=1 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
           +R LI+PP L YG +G  +IPP +T+  +++LL I+  P
Sbjct: 100 KRKLIIPPALGYGKEGKGKIPPESTLIFNIDLLEIRNGP 138

PPIases accelerate the folding of proteins during protein synthesis.

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P59024|FKB14_MOUSE Peptidyl-prolyl cis-trans isomerase FKBP14 OS=Mus musculus GN=Fkbp14 PE=2 SV=1

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
           +R L VPP L YG +G  +IPP +T+  +++LL I+  P
Sbjct: 100 KRKLTVPPALGYGKEGKGKIPPESTLIFNIDLLEIRNGP 138

PPIases accelerate the folding of proteins during protein synthesis.

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	41
356548345	233	PREDICTED: LOW QUALITY PROTEIN: probable	0.975	0.171	0.9	7e-14
357440275	237	FK506-binding protein [Medicago truncatu	0.975	0.168	0.925	7e-14
224138798	237	predicted protein [Populus trichocarpa]	0.975	0.168	0.95	7e-14
351722879	237	uncharacterized protein LOC100305843 [Gl	0.975	0.168	0.9	1e-13
225441076	233	PREDICTED: probable FKBP-type peptidyl-p	0.975	0.171	0.95	1e-13
449440175	231	PREDICTED: peptidyl-prolyl cis-trans iso	0.975	0.173	0.95	1e-13
374412402	237	FKBP-type peptidyl-prolyl cis-trans isom	0.975	0.168	0.925	2e-13
359482290	215	PREDICTED: probable FKBP-type peptidyl-p	0.975	0.186	0.95	2e-13
388491196	229	unknown [Lotus japonicus]	0.975	0.174	0.9	3e-13
116792715	235	unknown [Picea sitchensis]	0.975	0.170	0.875	3e-13

>gi|356548345|ref|XP_003542563.1| PREDICTED: LOW QUALITY PROTEIN: probable FKBP-type peptidyl-prolyl cis-trans isomerase 1, chloroplastic-like [Glycine max]

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/40 (90%), Positives = 40/40 (100%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRLLIVPPELAYGSKGVQEIPPN+TIE+D+ELL+IKQSPF
Sbjct: 185 QRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPF 224

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357440275|ref|XP_003590415.1| FK506-binding protein [Medicago truncatula] gi|355479463|gb|AES60666.1| FK506-binding protein [Medicago truncatula] gi|388512787|gb|AFK44455.1| unknown [Medicago truncatula]

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 40/40 (100%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRLLIVPPELAYGS+GVQEIPPNATIE+D+ELLAIKQSPF
Sbjct: 189 QRLLIVPPELAYGSRGVQEIPPNATIEMDIELLAIKQSPF 228

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138798|ref|XP_002322904.1| predicted protein [Populus trichocarpa] gi|222867534|gb|EEF04665.1| predicted protein [Populus trichocarpa]

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 40/40 (100%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRLL+VPPELAYGSKGVQEIPPNATIE+DVELLAIKQSPF
Sbjct: 189 QRLLVVPPELAYGSKGVQEIPPNATIELDVELLAIKQSPF 228

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722879|ref|NP_001237515.1| uncharacterized protein LOC100305843 [Glycine max] gi|255626751|gb|ACU13720.1| unknown [Glycine max]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/40 (90%), Positives = 40/40 (100%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRLLIVPPELAYGSKGVQEIPPN+TIE+D+ELL+IKQSPF
Sbjct: 185 QRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPF 224

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441076|ref|XP_002264435.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase 1, chloroplastic isoform 1 [Vitis vinifera] gi|297740022|emb|CBI30204.3| unnamed protein product [Vitis vinifera]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/40 (95%), Positives = 39/40 (97%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRLLIVPPELAYGSKGVQEIPPNATIE+DVELLAIKQSP 
Sbjct: 185 QRLLIVPPELAYGSKGVQEIPPNATIELDVELLAIKQSPL 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440175|ref|XP_004137860.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic-like [Cucumis sativus] gi|449501004|ref|XP_004161251.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic-like [Cucumis sativus]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 40/40 (100%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRLLIVPPELAYGSKGVQEIPPNATIE+DVELL+IKQSPF
Sbjct: 183 QRLLIVPPELAYGSKGVQEIPPNATIELDVELLSIKQSPF 222

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374412402|gb|AEZ49159.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Wolffia australiana]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/40 (92%), Positives = 40/40 (100%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRLLIVPP+LAYGSKGVQEIPPNATIE+DVELL+IKQSPF
Sbjct: 189 QRLLIVPPQLAYGSKGVQEIPPNATIELDVELLSIKQSPF 228

Source: Wolffia australiana

Species: Wolffia australiana

Genus: Wolffia

Family: Araceae

Order: Alismatales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482290|ref|XP_003632750.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase 1, chloroplastic isoform 2 [Vitis vinifera]

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/40 (95%), Positives = 39/40 (97%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRLLIVPPELAYGSKGVQEIPPNATIE+DVELLAIKQSP 
Sbjct: 167 QRLLIVPPELAYGSKGVQEIPPNATIELDVELLAIKQSPL 206

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491196|gb|AFK33664.1| unknown [Lotus japonicus]

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/40 (90%), Positives = 39/40 (97%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRLLIVPPELAYG KGVQEIPPNATIE+D+ELL+IKQSPF
Sbjct: 181 QRLLIVPPELAYGKKGVQEIPPNATIEVDIELLSIKQSPF 220

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116792715|gb|ABK26467.1| unknown [Picea sitchensis]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
           QRLLIVPPELAYG+KG+QEIPPNAT+E DVELL+IKQSPF
Sbjct: 187 QRLLIVPPELAYGNKGIQEIPPNATLEFDVELLSIKQSPF 226

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	41
TAIR|locus:2100063	230	AT3G10060 "AT3G10060" [Arabido	0.975	0.173	0.875	1.4e-14
UNIPROTKB|A8JC71	228	FKB16-4 "Peptidyl-prolyl cis-t	0.926	0.166	0.631	9.5e-08
UNIPROTKB|P73037	201	ytfC "Peptidyl-prolyl cis-tran	0.878	0.179	0.648	2.1e-07
UNIPROTKB|A8JAS8	104	FKB53 "Peptidyl-prolyl cis-tra	0.878	0.346	0.594	2.3e-07
UNIPROTKB|P45523	270	fkpA [Escherichia coli K-12 (t	0.878	0.133	0.611	2.7e-07
TAIR|locus:2030502	232	AT1G20810 "AT1G20810" [Arabido	0.951	0.168	0.538	3.8e-07
UNIPROTKB|Q0E4I6	234	Os02g0117600 "Peptidyl-prolyl	0.853	0.149	0.6	3.9e-07
UNIPROTKB|Q89SJ5	154	fbp "Peptidyl-prolyl cis-trans	0.878	0.233	0.594	7.8e-07
UNIPROTKB|A8J3L3	175	FKB16-5 "Peptidyl-prolyl cis-t	0.804	0.188	0.617	1.6e-06
UNIPROTKB|A8J3L4	194	FKB16-2a "Peptidyl-prolyl cis-	0.878	0.185	0.594	1.6e-06

TAIR|locus:2100063 AT3G10060 "AT3G10060" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSPF 41
             QRL+IVPPELAYG KGVQEIPPNATIE+D+ELL+IKQSPF
Sbjct:   182 QRLVIVPPELAYGKKGVQEIPPNATIELDIELLSIKQSPF 221

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0005634 "nucleus" evidence=ISM

GO:0006457 "protein folding" evidence=IEA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS;IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=RCA

UNIPROTKB|A8JC71 FKB16-4 "Peptidyl-prolyl cis-trans isomerase" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 124 (48.7 bits), Expect = 9.5e-08, P = 9.5e-08
 Identities = 24/38 (63%), Positives = 30/38 (78%)

Query:     3 RLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
             R  +VPPEL YG+  V EIPPN+TI ID+ELL+IK +P
Sbjct:   181 RRCLVPPELGYGNLQVGEIPPNSTITIDIELLSIKTNP 218

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|P73037 ytfC "Peptidyl-prolyl cis-trans isomerase" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)]

 Score = 119 (46.9 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 24/37 (64%), Positives = 30/37 (81%)

Query:     2 QRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIK 37
             +R LI+PP+LAYGS+G    IPPNAT+E +VELL IK
Sbjct:   165 KRKLIIPPDLAYGSRGAGGVIPPNATLEFEVELLGIK 201

GO:0030288 "outer membrane-bounded periplasmic space" evidence=IDA

UNIPROTKB|A8JAS8 FKB53 "Peptidyl-prolyl cis-trans isomerase" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 22/37 (59%), Positives = 31/37 (83%)

Query:     2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK 37
             +R L +PP+LAYG+ GV+  IPPNAT+E DVEL+A++
Sbjct:    68 KRRLCIPPQLAYGTSGVRGSIPPNATLEFDVELVAVQ 104

GO:0000412 "histone peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|P45523 fkpA [Escherichia coli K-12 (taxid:83333)]

 Score = 122 (48.0 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query:     5 LIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
             L++PPELAYG  GV  IPPN+T+  DVELL +K +P
Sbjct:   217 LVIPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAP 252

GO:0005515 "protein binding" evidence=IPI

GO:0042026 "protein refolding" evidence=IDA

GO:0016020 "membrane" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IEA;ISS

GO:0042597 "periplasmic space" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA;ISS

TAIR|locus:2030502 AT1G20810 "AT1G20810" [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 21/39 (53%), Positives = 28/39 (71%)

Query:     2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
             +R +IVPPE  YG KG+ EIPP AT E+++ELL +   P
Sbjct:   191 KRTVIVPPEAGYGQKGMNEIPPGATFELNIELLRVTPPP 229

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0006457 "protein folding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0031977 "thylakoid lumen" evidence=IDA

UNIPROTKB|Q0E4I6 Os02g0117600 "Peptidyl-prolyl cis-trans isomerase" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 119 (46.9 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query:     2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAI 36
             +R +IVPPEL YG KG+ EIPP+A  E+D+ELL +
Sbjct:   194 KRRVIVPPELGYGKKGMNEIPPDAPFELDIELLEV 228

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|Q89SJ5 fbp "Peptidyl-prolyl cis-trans isomerase" [Bradyrhizobium japonicum USDA 110 (taxid:224911)]

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 22/37 (59%), Positives = 29/37 (78%)

Query:     2 QRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIK 37
             +R LI+PP+L YG++G    IPPNAT+  DVELLA+K
Sbjct:   118 KRTLIIPPQLGYGARGAGGVIPPNATLMFDVELLAVK 154

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|A8J3L3 FKB16-5 "Peptidyl-prolyl cis-trans isomerase" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 21/34 (61%), Positives = 27/34 (79%)

Query:     2 QRLLIVPPELAYGSKGVQE-IPPNATIEIDVELL 34
             +RLL++PPEL YG++G    IPPNA +E DVELL
Sbjct:   115 KRLLVIPPELGYGARGAGGVIPPNAVLEFDVELL 148

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|A8J3L4 FKB16-2a "Peptidyl-prolyl cis-trans isomerase" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 111 (44.1 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query:     2 QRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIK 37
             +RLL++PPEL YG++G    IPPNA +E DVELL  K
Sbjct:   158 KRLLVIPPELGYGARGAGGVIPPNAVLEFDVELLPRK 194

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SR70	FK164_ARATH	5, ., 2, ., 1, ., 8	0.875	0.9756	0.1739	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XVI0861 hypothetical protein (237 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	41
PRK10902	269	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-	3e-10
pfam00254	94	pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-t	6e-10
COG0545	205	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans	1e-08
PRK11570	206	PRK11570, PRK11570, peptidyl-prolyl cis-trans isom	0.003

>gnl|CDD|236791 PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

 Score = 51.7 bits (124), Expect = 3e-10
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 5   LIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
           L++PPELAYG  GV  IP N+T+  DVELL +K +P
Sbjct: 217 LVIPPELAYGKAGVPGIPANSTLVFDVELLDVKPAP 252

Length = 269

>gnl|CDD|215821 pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-trans isomerase

 Score = 48.8 bits (117), Expect = 6e-10
 Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 2/35 (5%)

Query: 2  QRLLIVPPELAYGSKGVQE--IPPNATIEIDVELL 34
          +R L +PPELAYG +G+    IPPNAT+  +VELL
Sbjct: 60 KRKLTIPPELAYGEEGLAGGVIPPNATLVFEVELL 94

Length = 94

>gnl|CDD|223619 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 47.0 bits (112), Expect = 1e-08
 Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 3   RLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAIK 37
           R L +PPELAYG +GV   IPPN+T+  +VELL +K
Sbjct: 170 RKLTIPPELAYGERGVPGVIPPNSTLVFEVELLDVK 205

Length = 205

>gnl|CDD|183207 PRK11570, PRK11570, peptidyl-prolyl cis-trans isomerase; Provisional

 Score = 32.1 bits (73), Expect = 0.003
 Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)

Query: 5   LIVPPELAYGSKGV-QEIPPNATIEIDVELLAI 36
           L +P ELAYG +G    IPP +T+  +VELL I
Sbjct: 173 LTIPHELAYGERGAGASIPPFSTLVFEVELLEI 205

Length = 206

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	41
COG0545	205	FkpA FKBP-type peptidyl-prolyl cis-trans isomerase	99.6
KOG0544	108	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.54
KOG0549	188	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.53
KOG0552	226	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.47
PRK11570	206	peptidyl-prolyl cis-trans isomerase; Provisional	99.32
TIGR03516	177	ppisom_GldI peptidyl-prolyl isomerase, gliding mot	99.32
PRK10902	269	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.16
PF00254	94	FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomer	99.07
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	99.02
KOG0549	188	consensus FKBP-type peptidyl-prolyl cis-trans isom	92.54
KOG0543	397	consensus FKBP-type peptidyl-prolyl cis-trans isom	92.22
PRK15095	156	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	88.82
KOG3657	1075	consensus Mitochondrial DNA polymerase gamma, cata	80.47

>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

Probab=99.60  E-value=1.8e-15  Score=87.89  Aligned_cols=36  Identities=58%  Similarity=1.047  Sum_probs=33.3

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      +|+|+|||++|||++|.+ .|||||+|+|||||+++.
T Consensus       169 k~~l~IP~~laYG~~g~~g~Ippns~LvFeVeLl~v~  205 (205)
T COG0545         169 KRKLTIPPELAYGERGVPGVIPPNSTLVFEVELLDVK  205 (205)
T ss_pred             eEEEEeCchhccCcCCCCCCCCCCCeEEEEEEEEecC
Confidence            799999999999999976 499999999999999873

>KOG0544 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.54  E-value=1.3e-14  Score=77.10  Aligned_cols=36  Identities=47%  Similarity=0.856  Sum_probs=33.3

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      +++|.|+|++|||..|.+ .|||||+|+|||||+++.
T Consensus        72 kakLti~pd~aYG~~G~p~~IppNatL~FdVEll~v~  108 (108)
T KOG0544|consen   72 KAKLTISPDYAYGPRGHPGGIPPNATLVFDVELLKVN  108 (108)
T ss_pred             cceeeeccccccCCCCCCCccCCCcEEEEEEEEEecC
Confidence            689999999999999987 599999999999999873

>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.53  E-value=1.8e-14  Score=82.84  Aligned_cols=39  Identities=44%  Similarity=0.904  Sum_probs=36.0

Q ss_pred             EEEEEeCCCCCcCCCCCCC-CCCCCeEEEEEEEEEeeeCC
Q 044418            2 QRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIKQSP   40 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~-ip~~s~lvf~iel~~~~~~~   40 (41)
                      ||+++|||+||||++|.++ ||++|+|+|||||+++.+.+
T Consensus       140 kRkl~IPp~LgYG~~G~~~~IP~~A~LiFdiELv~i~~~~  179 (188)
T KOG0549|consen  140 KRKLIIPPHLGYGERGAPPKIPGDAVLIFDIELVKIERGP  179 (188)
T ss_pred             ceEEecCccccCccCCCCCCCCCCeeEEEEEEEEEeecCC
Confidence            7899999999999999874 99999999999999998753

>KOG0552 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.47  E-value=8.7e-14  Score=81.77  Aligned_cols=35  Identities=63%  Similarity=1.139  Sum_probs=33.8

Q ss_pred             EEEEEeCCCCCcCCCCCCCCCCCCeEEEEEEEEEe
Q 044418            2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAI   36 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~ip~~s~lvf~iel~~~   36 (41)
                      +|+|+|||.+|||.+|.+.|||||+|+|||||+.+
T Consensus       191 kRrviIPp~lgYg~~g~~~IppnstL~fdVEL~~v  225 (226)
T KOG0552|consen  191 KRRVIIPPELGYGKKGVPEIPPNSTLVFDVELLSV  225 (226)
T ss_pred             eeEEEeCccccccccCcCcCCCCCcEEEEEEEEec
Confidence            68999999999999999999999999999999986

>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.32  E-value=2.6e-12  Score=74.23  Aligned_cols=36  Identities=47%  Similarity=0.782  Sum_probs=33.6

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      +|+++||+++|||+.|.+ .||||++|+|+|||++|.
T Consensus       170 k~~~~IP~~lAYG~~g~~~~Ipp~s~Lif~veLl~i~  206 (206)
T PRK11570        170 KWELTIPHELAYGERGAGASIPPFSTLVFEVELLEIL  206 (206)
T ss_pred             EEEEEECHHHcCCCCCCCCCcCCCCeEEEEEEEEEEC
Confidence            799999999999999987 699999999999999973

>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated

Probab=99.32  E-value=2.3e-12  Score=73.10  Aligned_cols=37  Identities=41%  Similarity=0.540  Sum_probs=34.1

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~   38 (41)
                      +++++|||++|||..|.+ .||||++|+|+|||++|.+
T Consensus       140 ~~~~~iP~~~AYG~~g~~~~Ippns~L~f~IeL~~i~~  177 (177)
T TIGR03516       140 TATFLFPSHKAYGYYGDQNKIGPNLPIISTVTLLNIKP  177 (177)
T ss_pred             EEEEEECHHHcCCCCCCCCCcCcCCcEEEEEEEEEecC
Confidence            789999999999999986 6999999999999999863

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.

>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.16  E-value=9e-11  Score=70.13  Aligned_cols=39  Identities=54%  Similarity=0.947  Sum_probs=35.9

Q ss_pred             EEEEEeCCCCCcCCCCCCCCCCCCeEEEEEEEEEeeeCC
Q 044418            2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP   40 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~ip~~s~lvf~iel~~~~~~~   40 (41)
                      +|+++||++++||++|.+.||||++|+|+|+|+++...+
T Consensus       214 k~~l~IP~~laYG~~g~~gIppns~LvfeVeLl~V~~~~  252 (269)
T PRK10902        214 KIKLVIPPELAYGKAGVPGIPANSTLVFDVELLDVKPAP  252 (269)
T ss_pred             EEEEEECchhhCCCCCCCCCCCCCcEEEEEEEEEeccCc
Confidence            689999999999999988899999999999999997643

>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5

Probab=99.07  E-value=2.5e-10  Score=57.78  Aligned_cols=33  Identities=58%  Similarity=1.093  Sum_probs=30.3

Q ss_pred             EEEEEeCCCCCcCCCCCC--CCCCCCeEEEEEEEE
Q 044418            2 QRLLIVPPELAYGSKGVQ--EIPPNATIEIDVELL   34 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~--~ip~~s~lvf~iel~   34 (41)
                      +++++||+++|||+++..  .||++++|+|+|||+
T Consensus        60 ~~~~~vp~~~ayg~~~~~~~~ip~~~~l~f~Iell   94 (94)
T PF00254_consen   60 KREFYVPPELAYGEKGLEPPKIPPNSTLVFEIELL   94 (94)
T ss_dssp             EEEEEEEGGGTTTTTTBCTTTBTTTSEEEEEEEEE
T ss_pred             EeeeEeCChhhcCccccCCCCcCCCCeEEEEEEEC
Confidence            689999999999999874  499999999999996

2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=99.02  E-value=7.8e-10  Score=69.20  Aligned_cols=36  Identities=44%  Similarity=0.737  Sum_probs=32.0

Q ss_pred             EEEEEeCCCCCcCCCCC-C-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGV-Q-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~-~-~ip~~s~lvf~iel~~~~   37 (41)
                      ++.|+|+|+||||+.|. + .||||++|.|+|||+++.
T Consensus       153 ~a~v~i~~~YayG~~~~~~p~IPPnA~l~yEVeL~~f~  190 (397)
T KOG0543|consen  153 VALVTIDPKYAYGEEGGEPPLIPPNATLLYEVELLDFE  190 (397)
T ss_pred             eEEEEeCcccccCCCCCCCCCCCCCceEEEEEEEEeee
Confidence            57899999999996654 3 599999999999999998

>KOG0549 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=92.54  E-value=0.21  Score=29.26  Aligned_cols=32  Identities=25%  Similarity=0.605  Sum_probs=21.2

Q ss_pred             EEEEEeCCCCCcCCCCCCCCCCCCeEEEEEEEEEe
Q 044418            2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAI   36 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~ip~~s~lvf~iel~~~   36 (41)
                      +++++|||+++||..+...   -..++|.+.++.+
T Consensus        24 ~rkvv~pp~l~fg~~~~~~---~~~~~~~~~l~~~   55 (188)
T KOG0549|consen   24 KRKVVIPPHLGFGEGGRGD---LNILVITILLVLL   55 (188)
T ss_pred             cceeccCCccccccccccc---ccceEEEeeeeeh
Confidence            6899999999999655432   2235555555443

>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

Probab=92.22  E-value=0.11  Score=33.21  Aligned_cols=21  Identities=52%  Similarity=0.832  Sum_probs=17.8

Q ss_pred             CCCCCC-CCCCCCeEEEEEEEE
Q 044418           14 GSKGVQ-EIPPNATIEIDVELL   34 (41)
Q Consensus        14 g~~g~~-~ip~~s~lvf~iel~   34 (41)
                      |+.+.+ .||++++|.|+|+|+
T Consensus        61 g~~~~pp~ip~~a~l~fe~el~   82 (397)
T KOG0543|consen   61 GEAGSPPKIPSNATLLFEVELL   82 (397)
T ss_pred             cccCCCCCCCCCcceeeeeccc
Confidence            666666 499999999999985

>PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=88.82  E-value=0.22  Score=27.76  Aligned_cols=15  Identities=27%  Similarity=0.598  Sum_probs=13.5

Q ss_pred             EEEEEeCCCCCcCCC
Q 044418            2 QRLLIVPPELAYGSK   16 (41)
Q Consensus         2 ~~~l~ip~~layg~~   16 (41)
                      ++++.|||+.|||+.
T Consensus        60 ~~~v~ipp~~ayG~~   74 (156)
T PRK15095         60 KKTFSLEPEAAFGVP   74 (156)
T ss_pred             EEEEEEChHHhcCCC
Confidence            688999999999976

>KOG3657 consensus Mitochondrial DNA polymerase gamma, catalytic subunit [Replication, recombination and repair]

Probab=80.47  E-value=2.4  Score=30.09  Aligned_cols=23  Identities=30%  Similarity=0.605  Sum_probs=18.4

Q ss_pred             CcCCCCCC---CCCCCCeEEEEEEEE
Q 044418           12 AYGSKGVQ---EIPPNATIEIDVELL   34 (41)
Q Consensus        12 ayg~~g~~---~ip~~s~lvf~iel~   34 (41)
                      .|+.+|.+   .+|..+.|+||||++
T Consensus       168 kY~p~g~~~~V~~Pde~~lVFDVEvl  193 (1075)
T KOG3657|consen  168 KYPPEGPPVPVDYPDESILVFDVEVL  193 (1075)
T ss_pred             ecCCCCCCcccCCCccceeEEEEEEE
Confidence            46666765   489999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	41
1q6u_A	245	Crystal Structure Of Fkpa From Escherichia Coli Len		1e-06
1q6h_A	224	Crystal Structure Of A Truncated Form Of Fkpa From		3e-06
4dip_A	125	Crystal Structure Of Human Peptidyl-Prolyl Cis-Tran		1e-04
2y78_A	133	Crystal Structure Of Bpss1823, A Mip-Like Chaperone		3e-04
2ke0_A	117	Solution Structure Of Peptidyl-Prolyl Cis-Trans Iso		4e-04
4dz3_A	113	Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Is		4e-04
3uf8_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		5e-04
3vaw_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		6e-04
4ggq_C	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		6e-04
3uqb_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		6e-04
3uqa_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		7e-04

>pdb|1Q6U|A Chain A, Crystal Structure Of Fkpa From Escherichia Coli Length = 245

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 5   LIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
           L++PPELAYG  GV  IPPN+T+  DVELL +K +P
Sbjct: 192 LVIPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAP 227

>pdb|1Q6H|A Chain A, Crystal Structure Of A Truncated Form Of Fkpa From Escherichia Coli Length = 224

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 5   LIVPPELAYGSKGVQEIPPNATIEIDVELLAIK 37
           L++PPELAYG  GV  IPPN+T+  DVELL +K
Sbjct: 192 LVIPPELAYGKAGVPGIPPNSTLVFDVELLDVK 224

>pdb|4DIP|A Chain A, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans Isomerase Fkbp14 Length = 125

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
           +R LI+PP L YG +G  +IPP +T+  +++LL I+  P
Sbjct: 87  KRKLIIPPALGYGKEGKGKIPPESTLIFNIDLLEIRNGP 125

>pdb|2Y78|A Chain A, Crystal Structure Of Bpss1823, A Mip-Like Chaperone From Burkholderia Pseudomallei Length = 133

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 3   RLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAI 36
           R L +PP+L YG++G    IPPNAT+  +VELL +
Sbjct: 99  RRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133

>pdb|2KE0|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase From Burkholderia Pseudomallei Length = 117

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 3   RLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAI 36
           R L +PP+L YG++G    IPPNAT+  +VELL +
Sbjct: 83  RRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 117

>pdb|4DZ3|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation M61h From Burkholderia Pseudomallei Complexed With Fk506 Length = 113

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 3   RLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAI 36
           R L +PP+L YG++G    IPPNAT+  +VELL +
Sbjct: 79  RRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 113

>pdb|3UF8|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With A G95a Surface Mutation From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 3   RLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAI 36
           R L +PP+L YG++G    IPPNAT+  +VELL +
Sbjct: 175 RRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209

>pdb|3VAW|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation V3i From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 3   RLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAI 36
           R L +PP+L YG++G    IPPNAT+  +VELL +
Sbjct: 175 RRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 209

>pdb|4GGQ|C Chain C, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase From Burkholderia Pseudomallei Complexed With Cj40 Length = 209

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 3   RLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAI 36
           R L +PP+L YG++G    IPPNAT+  +VELL +
Sbjct: 175 RRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 209

>pdb|3UQB|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation D44g From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 3   RLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAI 36
           R L +PP+L YG++G    IPPNAT+  +VELL +
Sbjct: 175 RRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 209

>pdb|3UQA|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation A54e From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 3   RLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAI 36
           R L +PP+L YG++G    IPPNAT+  +VELL +
Sbjct: 175 RRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 209

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	41
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	2e-14
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	2e-12
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	4e-12
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	6e-12
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	6e-12
2ppn_A	107	FK506-binding protein 1A; high resolution protein	6e-12
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	1e-11
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	2e-11
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	2e-11
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	2e-11
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	4e-11
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	5e-11
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	5e-11
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	6e-11
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	3e-09
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	6e-11
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	7e-11
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	7e-11
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	8e-11
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	9e-11
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	2e-10
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	2e-10
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	6e-10
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	2e-09
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	4e-10
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	9e-10
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	2e-09
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	3e-05
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	5e-05
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	1e-04
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	4e-04

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens} Length = 125

 Score = 60.4 bits (147), Expect = 2e-14
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP 40
           +R LI+PP L YG +G  +IPP +T+  +++LL I+  P
Sbjct: 87  KRKLIIPPALGYGKEGKGKIPPESTLIFNIDLLEIRNGP 125

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 135

 Score = 55.0 bits (133), Expect = 2e-12
 Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 3   RLLIVPPELAYGSKGVQE--IPPNATIEIDVELLAIKQSP 40
            ++    +  YG +G +   IPP+A + ++V L      P
Sbjct: 86  AMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRP 125

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens} Length = 102

 Score = 53.7 bits (130), Expect = 4e-12
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 2   QRLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAIKQSP 40
           +R L++P EL YG +G   +IP  AT+  +VELL I++  
Sbjct: 61  KRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIERRT 100

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A Length = 129

 Score = 54.2 bits (131), Expect = 6e-12
 Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 3   RLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAIKQ 38
            L+ +     YG +G  + IP N+ +  ++ELL+ ++
Sbjct: 91  CLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A Length = 128

 Score = 53.8 bits (130), Expect = 6e-12
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 2   QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK 37
              L+  PE AYGS G   +IP NAT+  ++ELL  K
Sbjct: 90  ICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 126

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ... Length = 107

 Score = 53.3 bits (129), Expect = 6e-12
 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 2   QRLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAIK 37
           +  L + P+ AYG+ G    IPP+AT+  DVELL ++
Sbjct: 71  RAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE 107

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A Length = 144

 Score = 53.9 bits (130), Expect = 1e-11
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 2   QRLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAIK 37
              L+  PE AYGS G   +IP NAT+  ++ELL  K
Sbjct: 106 ICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 142

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1 Length = 135

 Score = 53.1 bits (128), Expect = 2e-11
 Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 3   RLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAIK 37
               +  +  YG  G   +IP  AT+  +VEL    
Sbjct: 86  AEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWS 121

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1 Length = 113

 Score = 52.6 bits (127), Expect = 2e-11
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 2   QRLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAI 36
           +  L +P   AYG +G    IPPN+T+  DVELL +
Sbjct: 77  KARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A Length = 118

 Score = 52.2 bits (126), Expect = 2e-11
 Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 3   RLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK 37
            ++    +  YG +G    IPP+A + ++V L    
Sbjct: 82  AMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia} Length = 130

 Score = 51.9 bits (125), Expect = 4e-11
 Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)

Query: 2   QRLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAI 36
           + L  +P +LAYG +G    IPP AT+  +VELLA+
Sbjct: 95  KALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* Length = 133

 Score = 51.9 bits (125), Expect = 5e-11
 Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 2   QRLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAI 36
            R L +PP+L YG++G    IPPNAT+  +VELL +
Sbjct: 98  VRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A Length = 129

 Score = 51.6 bits (124), Expect = 5e-11
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 6/41 (14%)

Query: 2   QRLLIVPPELAYGSKGVQE------IPPNATIEIDVELLAI 36
           +R L +PPELAYG +G         IPP + +  D+E +  
Sbjct: 88  KRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280

 Score = 53.3 bits (128), Expect = 6e-11
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 2   QRLLIVPPELAYGSKGVQE--IPPNATIEIDVELLAIK 37
             ++ + P  A+GS G ++  IPPNA ++ ++ L + +
Sbjct: 236 HSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFE 273

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280

 Score = 48.7 bits (116), Expect = 3e-09
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 2   QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQSPF 41
              +   PE AYGS G   +IPPNAT+  +VEL   K    
Sbjct: 122 VCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGEDL 162

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens} Length = 157

 Score = 51.7 bits (124), Expect = 6e-11
 Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 3   RLLIVPPELAYGSKGVQE--IPPNATIEIDVELLAIK 37
            ++    +  YG +G +   IPP+A + ++V L    
Sbjct: 112 AMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAV 148

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} Length = 180

 Score = 52.2 bits (125), Expect = 7e-11
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 3   RLLIVPPELAYGSKG---VQEIPPNATIEIDVELLAIKQSP 40
            L+ V  ELAYG +G      +PP A +  +VE++   ++ 
Sbjct: 122 ALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETK 162

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A Length = 224

 Score = 52.5 bits (126), Expect = 7e-11
 Identities = 21/33 (63%), Positives = 26/33 (78%)

Query: 5   LIVPPELAYGSKGVQEIPPNATIEIDVELLAIK 37
           L++PPELAYG  GV  IPPN+T+  DVELL +K
Sbjct: 192 LVIPPELAYGKAGVPGIPPNSTLVFDVELLDVK 224

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} PDB: 1pbk_A* Length = 119

 Score = 50.8 bits (122), Expect = 8e-11
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 3   RLLIVPPELAYGSKGVQE--IPPNATIEIDVELLAI 36
             L + PE AYG KG  +  IPPN  +  +VEL+ I
Sbjct: 83  ARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 1euv_B 3v60_A 3v61_A 3v62_A* Length = 209

 Score = 52.1 bits (125), Expect = 9e-11
 Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 2   QRLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAI 36
            R L +PP+L YG++G    IPPNAT+  +VELL +
Sbjct: 174 VRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} Length = 134

 Score = 50.3 bits (121), Expect = 2e-10
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 3   RLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAI 36
              +  P  AYG+ G    IPPN T+  ++ELL  
Sbjct: 98  ARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDF 132

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 51.7 bits (124), Expect = 2e-10
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 2   QRLLIVPPELAYGSKGVQE---IPPNATIEIDVELLAIKQ 38
             L+ +PPE AYGS   ++   +PPN+T+  +VEL++  +
Sbjct: 316 VALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 50.6 bits (121), Expect = 6e-10
 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 2   QRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIKQSPF 41
             L  +PPELAYG  G    IP NAT++ DVELL+      
Sbjct: 82  NALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRD 122

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 49.0 bits (117), Expect = 2e-09
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 6/46 (13%)

Query: 2   QRLLIVPPELAYGSKGVQE------IPPNATIEIDVELLAIKQSPF 41
           + LL V P+  +G  G         +PPNA++ ID+EL++ K    
Sbjct: 194 KVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTE 239

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1 Length = 167

 Score = 49.7 bits (119), Expect = 4e-10
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 5   LIVPPELAYGSKGV-QEIPPNATIEIDVELLAIKQSP 40
           L +P +LAYG  G    IPP + +E DVEL++IK   
Sbjct: 109 LFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGG 145

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} Length = 219

 Score = 49.7 bits (119), Expect = 9e-10
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 5   LIVPPELAYGSKGV-QEIPPNATIEIDVELLAIKQ 38
           L++P + AYG++G    I P   +  ++EL+A+ Q
Sbjct: 185 LVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVSQ 219

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A* Length = 213

 Score = 48.9 bits (117), Expect = 2e-09
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 5   LIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQS 39
           + VP  LAYG + V   I PN T+   + L+++K+S
Sbjct: 177 IYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS 212

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457

 Score = 37.4 bits (86), Expect = 3e-05
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 2   QRLLIVPPELAYGSKGVQE--IPPNATIEIDVELLAIKQ 38
           Q +L + P   +G  G  +  I PNA +  +V L + ++
Sbjct: 214 QCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEK 252

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457

 Score = 36.6 bits (84), Expect = 5e-05
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 3   RLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQSPF 41
             L+  PE AYGS G   +IP NAT+  ++ELL  K    
Sbjct: 103 CHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGEDL 142

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} Length = 338

 Score = 35.4 bits (81), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 4   LLIVPPELAYGSKGVQE---IPPNATIEIDVELLAIKQSPF 41
           L+ V  ELAYG +G      +PP A +  +VE++   ++  
Sbjct: 123 LVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKE 163

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336

 Score = 34.1 bits (78), Expect = 4e-04
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 4   LLIVPPELAYGSKGV--QEIPPNATIEIDVELL 34
           ++ + P  A+GS G    +IPPNA ++ ++ L 
Sbjct: 95  IVYLKPSYAFGSVGKEKFQIPPNAELKYELHLK 127

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	41
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	99.48
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	99.39
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	99.35
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	99.34
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.32
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.31
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	99.31
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	99.31
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	99.3
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	99.3
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	99.29
2ppn_A	107	FK506-binding protein 1A; high resolution protein	99.28
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	99.26
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	99.26
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	99.24
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	99.23
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	99.21
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	99.21
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	99.2
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	99.18
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	99.18
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	99.14
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	98.99
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	98.98
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	98.94
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	98.93
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	98.86
2lkn_A	165	AH receptor-interacting protein; FKBP-type domain,	98.76
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	98.67
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	98.01
1hxv_A	113	Trigger factor; FKBP fold, ppiase, chaperone; NMR	97.6
2k8i_A	171	SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase,	97.39
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	97.38
3prb_A	231	FKBP-type peptidyl-prolyl CIS-trans isomerase; cha	97.03
1w26_A	432	Trigger factor, TF; chaperone, protein folding, ri	96.12
3pr9_A	157	FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB	94.16
1ix5_A	151	FKBP; ppiase, isomerase; NMR {Methanothermococcust	93.85
2kfw_A	196	FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD	92.22
2kr7_A	151	FKBP-type peptidyl-prolyl CIS-trans isomerase SLY;	92.09
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	91.28
3cgm_A	158	SLYD, peptidyl-prolyl CIS-trans isomerase; chapero	89.97
1t11_A	392	Trigger factor, TF; helix-turn-helix, four-helix-b	87.8

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}

Probab=99.48  E-value=5.3e-14  Score=73.96  Aligned_cols=39  Identities=44%  Similarity=0.956  Sum_probs=36.8

Q ss_pred             EEEEEeCCCCCcCCCCCCCCCCCCeEEEEEEEEEeeeCC
Q 044418            2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQSP   40 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~ip~~s~lvf~iel~~~~~~~   40 (41)
                      +++++||+++|||+.|.+.||||++|+|+|||+++++.|
T Consensus        87 ~~~~~ip~~~aYG~~g~~~Ip~~~~l~f~vel~~i~~~P  125 (125)
T 4dip_A           87 KRKLIIPPALGYGKEGKGKIPPESTLIFNIDLLEIRNGP  125 (125)
T ss_dssp             EEEEEECGGGTTTTTCBTTBCTTCCEEEEEEEEEEECCC
T ss_pred             EEEEEEChHHhcCCCCCCCCCCCCeEEEEEEEEEEEcCC
Confidence            689999999999999988999999999999999998865

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0

Probab=99.39  E-value=4.5e-13  Score=77.21  Aligned_cols=37  Identities=32%  Similarity=0.715  Sum_probs=34.5

Q ss_pred             EEEEEeCCCCCcCCCCCCC-CCCCCeEEEEEEEEEeee
Q 044418            2 QRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~-ip~~s~lvf~iel~~~~~   38 (41)
                      +++++|||++|||+.|.+. ||||++|+|+|||+++.+
T Consensus       182 k~~v~IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik~  219 (219)
T 3oe2_A          182 KWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVSQ  219 (219)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             EEEEEECchhcCCCCCCCCCCCCCCeEEEEEEEEEEeC
Confidence            7899999999999999985 999999999999999863

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*

Probab=99.35  E-value=8.9e-13  Score=68.59  Aligned_cols=36  Identities=44%  Similarity=0.776  Sum_probs=33.3

Q ss_pred             EEEEEeCCCCCcCCCCCC--CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ--EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~--~ip~~s~lvf~iel~~~~   37 (41)
                      +++++||+++|||+.|.+  .||||++|+|+|||++++
T Consensus        82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i~  119 (119)
T 3kz7_A           82 KARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID  119 (119)
T ss_dssp             EEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred             EEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEeC
Confidence            689999999999999986  599999999999999974

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1

Probab=99.34  E-value=1.5e-12  Score=72.18  Aligned_cols=38  Identities=45%  Similarity=0.769  Sum_probs=35.1

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~~   39 (41)
                      +++++||+++|||+.|.+ .||||++|+|+|+|+++.+.
T Consensus       106 ~~~~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~~  144 (167)
T 1jvw_A          106 RWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDG  144 (167)
T ss_dssp             EEEEEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGG
T ss_pred             EEEEEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEcC
Confidence            689999999999999986 59999999999999999864

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A

Probab=99.32  E-value=2.4e-12  Score=69.42  Aligned_cols=37  Identities=46%  Similarity=0.686  Sum_probs=34.3

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~   38 (41)
                      +++++|||++|||+.|.+ .||||++|+|+|+|++++.
T Consensus       106 ~~~v~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ikg  143 (144)
T 3o5e_A          106 ICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG  143 (144)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             EEEEEEChHHCcCCCCCCCCcCCCCeEEEEEEEEEecC
Confidence            689999999999999986 6999999999999999864

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A

Probab=99.31  E-value=2.9e-12  Score=67.76  Aligned_cols=37  Identities=46%  Similarity=0.686  Sum_probs=34.3

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~   38 (41)
                      +++++|||++|||+.|.+ .||||++|+|+|+|++++.
T Consensus        90 ~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~~  127 (128)
T 3o5q_A           90 ICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG  127 (128)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             EEEEEEChHHcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence            689999999999999986 6999999999999999874

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}

Probab=99.31  E-value=3.8e-12  Score=70.10  Aligned_cols=39  Identities=23%  Similarity=0.459  Sum_probs=35.3

Q ss_pred             EEEEEeCCCCCcCCCC-CC-CCCCCCeEEEEEEEEEeeeCC
Q 044418            2 QRLLIVPPELAYGSKG-VQ-EIPPNATIEIDVELLAIKQSP   40 (41)
Q Consensus         2 ~~~l~ip~~layg~~g-~~-~ip~~s~lvf~iel~~~~~~~   40 (41)
                      +++++||+++|||+.| .+ .||||++|+|+|||+++.+..
T Consensus       111 ~~~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~~  151 (157)
T 2jwx_A          111 TAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDLE  151 (157)
T ss_dssp             EEEEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEECS
T ss_pred             EEEEEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEccc
Confidence            7899999999999999 65 599999999999999998753

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*

Probab=99.31  E-value=3.4e-12  Score=73.03  Aligned_cols=38  Identities=37%  Similarity=0.648  Sum_probs=35.2

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~~   39 (41)
                      +++++||+++|||+.|.+ .||||++|+|+|||+++.+.
T Consensus       174 k~~v~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~~  212 (213)
T 1fd9_A          174 TWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS  212 (213)
T ss_dssp             EEEEEECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEECC
T ss_pred             EEEEEECchhccCccCCCCCCCCCCeEEEEEEEEEEEcC
Confidence            689999999999999985 59999999999999999865

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}

Probab=99.30  E-value=3.5e-12  Score=68.03  Aligned_cols=36  Identities=36%  Similarity=0.663  Sum_probs=33.4

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      +++++|||++|||+.+.+ .||||++|+|+|+|++++
T Consensus        97 ~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~  133 (134)
T 3b7x_A           97 LARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL  133 (134)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred             EEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence            689999999999999986 499999999999999986

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A

Probab=99.30  E-value=4.8e-12  Score=66.81  Aligned_cols=38  Identities=26%  Similarity=0.560  Sum_probs=34.7

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~~   39 (41)
                      +++++|||++|||+.+.+ .||||++|+|+|+|+++.+.
T Consensus        90 ~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~~  128 (129)
T 2vn1_A           90 KCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFREL  128 (129)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECC
T ss_pred             EEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEecC
Confidence            689999999999999886 59999999999999999864

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}

Probab=99.29  E-value=4.5e-12  Score=64.45  Aligned_cols=38  Identities=45%  Similarity=0.845  Sum_probs=34.6

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~~   39 (41)
                      +++++||+++|||+.+.+ .||+|++|+|+|+|+++.+.
T Consensus        61 ~~~v~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~~~   99 (102)
T 2pbc_A           61 KRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIERR   99 (102)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEGGG
T ss_pred             EEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEeccc
Confidence            688999999999999886 59999999999999999764

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...

Probab=99.28  E-value=5.9e-12  Score=64.37  Aligned_cols=36  Identities=44%  Similarity=0.798  Sum_probs=33.0

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      +++++||+++|||+.+.+ .||||++|+|+|+|++++
T Consensus        71 ~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~  107 (107)
T 2ppn_A           71 RAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE  107 (107)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred             EEEEEECHHHccCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence            689999999999999875 599999999999999874

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A

Probab=99.26  E-value=6.1e-12  Score=72.46  Aligned_cols=36  Identities=58%  Similarity=1.015  Sum_probs=33.7

Q ss_pred             EEEEEeCCCCCcCCCCCCCCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~ip~~s~lvf~iel~~~~   37 (41)
                      +++++||+++|||+.+.+.||||++|+|+|+|++++
T Consensus       189 k~~v~IP~~laYG~~g~~~IPp~stLiF~VeL~~ik  224 (224)
T 1q6h_A          189 KIKLVIPPELAYGKAGVPGIPPNSTLVFDVELLDVK  224 (224)
T ss_dssp             EEEEEECGGGTTTTTCBTTBCTTCCEEEEEEEEEEC
T ss_pred             EEEEEECchhhcCcCCCCCCCCCCEEEEEEEEEEeC
Confidence            789999999999999987899999999999999874

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1

Probab=99.26  E-value=8.1e-12  Score=64.54  Aligned_cols=36  Identities=44%  Similarity=0.796  Sum_probs=33.0

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      +++++||+++|||+.+.+ .||||++|+|+|+|++++
T Consensus        77 ~~~v~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~ik  113 (113)
T 1yat_A           77 KARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKVN  113 (113)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred             EEEEEECHHHCcCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence            689999999999999876 599999999999999874

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A

Probab=99.24  E-value=1.3e-11  Score=64.40  Aligned_cols=36  Identities=25%  Similarity=0.513  Sum_probs=33.3

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      +++++||+++|||+.+.+ .||||++|+|+|+|++++
T Consensus        81 ~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~  117 (118)
T 2awg_A           81 TAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV  117 (118)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred             EEEEEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence            689999999999999876 599999999999999986

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}

Probab=99.23  E-value=2.2e-11  Score=64.85  Aligned_cols=35  Identities=49%  Similarity=0.882  Sum_probs=32.1

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEe
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAI   36 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~   36 (41)
                      +++++||+++|||+.+.+ .||||++|+|+|+|+++
T Consensus        95 ~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i  130 (130)
T 2lgo_A           95 KALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV  130 (130)
T ss_dssp             EEEEEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred             EEEEEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence            689999999999999876 59999999999999975

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*

Probab=99.21  E-value=1.7e-11  Score=65.53  Aligned_cols=35  Identities=51%  Similarity=0.963  Sum_probs=32.4

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEe
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAI   36 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~   36 (41)
                      +++++||+++|||+.+.+ .||||++|+|+|||+++
T Consensus        98 ~~~v~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I  133 (133)
T 2y78_A           98 VRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV  133 (133)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred             EEEEEECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence            689999999999999986 59999999999999975

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*

Probab=99.21  E-value=1.5e-11  Score=69.83  Aligned_cols=35  Identities=51%  Similarity=0.981  Sum_probs=32.7

Q ss_pred             EEEEEeCCCCCcCCCCCCC-CCCCCeEEEEEEEEEe
Q 044418            2 QRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAI   36 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~-ip~~s~lvf~iel~~~   36 (41)
                      +++++|||++|||+.|.+. ||||++|+|+|||+++
T Consensus       174 ~~~v~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I  209 (209)
T 3uf8_A          174 VRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV  209 (209)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred             EEEEEECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence            6899999999999999875 9999999999999985

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}

Probab=99.20  E-value=2.1e-11  Score=67.95  Aligned_cols=38  Identities=34%  Similarity=0.609  Sum_probs=34.6

Q ss_pred             EEEEEeCCCCCcCCCCC---CCCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGV---QEIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~---~~ip~~s~lvf~iel~~~~~~   39 (41)
                      +++|+||+++|||+.|.   +.||+|++|+|+|+|+++.+.
T Consensus       121 ~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~  161 (180)
T 2f4e_A          121 RALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDET  161 (180)
T ss_dssp             EEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCB
T ss_pred             EEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecC
Confidence            68999999999999986   479999999999999999764

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1

Probab=99.18  E-value=3.6e-11  Score=64.14  Aligned_cols=38  Identities=26%  Similarity=0.473  Sum_probs=34.3

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~~   39 (41)
                      +++++|||++|||+.|.+ .||+|++|+|+|+|+++.+.
T Consensus        85 ~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~  123 (135)
T 1r9h_A           85 VAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAE  123 (135)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-
T ss_pred             EEEEEEChHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC
Confidence            689999999999999985 69999999999999999753

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=2e-11  Score=65.18  Aligned_cols=38  Identities=24%  Similarity=0.492  Sum_probs=34.5

Q ss_pred             EEEEEeCCCCCcCCCC-CC-CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKG-VQ-EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g-~~-~ip~~s~lvf~iel~~~~~~   39 (41)
                      +++++||+++|||+.+ .+ .||||++|+|+|+|+++.+.
T Consensus        85 ~~~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~  124 (135)
T 2d9f_A           85 TAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDR  124 (135)
T ss_dssp             EEEEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESS
T ss_pred             EEEEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecC
Confidence            6899999999999998 55 59999999999999999865

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A

Probab=99.14  E-value=1.8e-11  Score=64.75  Aligned_cols=35  Identities=43%  Similarity=0.846  Sum_probs=31.9

Q ss_pred             EEEEEeCCCCCcCCCCCC------CCCCCCeEEEEEEEEEe
Q 044418            2 QRLLIVPPELAYGSKGVQ------EIPPNATIEIDVELLAI   36 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~------~ip~~s~lvf~iel~~~   36 (41)
                      +++++||+++|||+.+.+      .||||++|+|+|||+++
T Consensus        88 ~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i  128 (129)
T 1u79_A           88 KRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK  128 (129)
T ss_dssp             EEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred             EEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence            689999999999999862      59999999999999987

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=98.99  E-value=3.6e-10  Score=67.38  Aligned_cols=37  Identities=41%  Similarity=0.741  Sum_probs=33.6

Q ss_pred             EEEEEeCCCCCcCCCCC---CCCCCCCeEEEEEEEEEeee
Q 044418            2 QRLLIVPPELAYGSKGV---QEIPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~---~~ip~~s~lvf~iel~~~~~   38 (41)
                      +++++|||++|||+.+.   +.||+|++|+|+|+|+++++
T Consensus       316 ~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~  355 (356)
T 3jxv_A          316 VALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK  355 (356)
T ss_dssp             EEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred             EEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence            68999999999999885   35999999999999999976

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=98.98  E-value=7.1e-10  Score=66.14  Aligned_cols=37  Identities=41%  Similarity=0.752  Sum_probs=33.8

Q ss_pred             EEEEEeCCCCCcCCCCCC------CCCCCCeEEEEEEEEEeee
Q 044418            2 QRLLIVPPELAYGSKGVQ------EIPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~------~ip~~s~lvf~iel~~~~~   38 (41)
                      +++++|||++|||+.|.+      .||+|++|+|+|+|+++.+
T Consensus       194 ~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~  236 (356)
T 3jxv_A          194 KVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKT  236 (356)
T ss_dssp             EEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEEC
T ss_pred             EEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEec
Confidence            689999999999999875      3999999999999999975

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=98.94  E-value=1.2e-09  Score=64.02  Aligned_cols=39  Identities=28%  Similarity=0.663  Sum_probs=35.0

Q ss_pred             EEEEEeCCCCCcCCCCCC--CCCCCCeEEEEEEEEEeeeCC
Q 044418            2 QRLLIVPPELAYGSKGVQ--EIPPNATIEIDVELLAIKQSP   40 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~--~ip~~s~lvf~iel~~~~~~~   40 (41)
                      +++++|||++|||+.+.+  .||+|++|+|+|+|+++++.+
T Consensus       236 ~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~~~  276 (280)
T 1q1c_A          236 HSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAK  276 (280)
T ss_dssp             EEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCC
T ss_pred             EEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeCCC
Confidence            678999999999999875  499999999999999998754

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=98.93  E-value=1.4e-09  Score=63.75  Aligned_cols=37  Identities=46%  Similarity=0.731  Sum_probs=34.0

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~   38 (41)
                      +++++|||++|||+.|.+ .||+|++|+|+|+|+++..
T Consensus       122 ~~~v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~  159 (280)
T 1q1c_A          122 VCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKG  159 (280)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             EEEEEECcHHhCCCcCccCCCCCCCcEEEEEEeeeecc
Confidence            689999999999999976 5999999999999999874

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=98.86  E-value=3.1e-09  Score=63.84  Aligned_cols=37  Identities=46%  Similarity=0.686  Sum_probs=34.0

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~   38 (41)
                      +++|+|||++|||+.|.+ .||+|++|+|+|+|+++..
T Consensus       102 ~~~~~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~  139 (457)
T 1kt0_A          102 ICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG  139 (457)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             EEEEEEChHHhccccCCCCCCCCCCcEEEEEeeceeec
Confidence            689999999999999986 5999999999999999864

>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}

Probab=98.76  E-value=3.2e-09  Score=59.01  Aligned_cols=18  Identities=11%  Similarity=0.296  Sum_probs=14.8

Q ss_pred             CCCCeEEEEEEEEEeeeC
Q 044418           22 PPNATIEIDVELLAIKQS   39 (41)
Q Consensus        22 p~~s~lvf~iel~~~~~~   39 (41)
                      +++++|+|+|||++++++
T Consensus       142 ~~p~~L~FeIELl~Ve~P  159 (165)
T 2lkn_A          142 QNPQPLIFHMEMLKVESP  159 (165)
T ss_dssp             HSCCCCEEEEEEEEEECT
T ss_pred             CCCCCeEEEEEEEEEcCC
Confidence            344789999999999875

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}

Probab=98.67  E-value=4.6e-08  Score=56.77  Aligned_cols=38  Identities=34%  Similarity=0.609  Sum_probs=34.4

Q ss_pred             EEEEEeCCCCCcCCCCC---CCCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGV---QEIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~---~~ip~~s~lvf~iel~~~~~~   39 (41)
                      +++|+||+.++||+.|.   +.||++++++|+|+|+++...
T Consensus       121 ~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~  161 (338)
T 2if4_A          121 RALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDET  161 (338)
T ss_dssp             EEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECC
T ss_pred             eEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCC
Confidence            68999999999999987   569999999999999998763

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A

Probab=98.01  E-value=1.5e-05  Score=46.05  Aligned_cols=38  Identities=29%  Similarity=0.685  Sum_probs=34.4

Q ss_pred             EEEEEeCCCCCcCCCCCC--CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGVQ--EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~--~ip~~s~lvf~iel~~~~~~   39 (41)
                      ++.+.|+|++|||..|..  .||+++++.|+++|.++.+.
T Consensus        93 ~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A  132 (336)
T 1p5q_A           93 HSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKA  132 (336)
T ss_dssp             EEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECC
T ss_pred             eEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccc
Confidence            568999999999999986  59999999999999999865

>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1

Probab=97.60  E-value=3e-05  Score=40.25  Aligned_cols=31  Identities=29%  Similarity=0.403  Sum_probs=23.6

Q ss_pred             EEEEEeC-CCCCcCCCCCCCCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVP-PELAYGSKGVQEIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip-~~layg~~g~~~ip~~s~lvf~iel~~~~   37 (41)
                      ++++.|| |.. ||+++    .++++|+|+|+|++++
T Consensus        82 ~~~v~i~fP~~-Yg~~~----~~g~~l~F~V~l~~Vk  113 (113)
T 1hxv_A           82 KKTLALTFPSD-YHVKE----LQSKPVTFEVVLKAIK  113 (113)
T ss_dssp             EEEECCCCCTT-SSSSG----GGSCCCEEEEEECCBC
T ss_pred             EEEEEEeCchh-hCcCC----CCCCEEEEEEEEEEEC
Confidence            5788895 333 98866    3679999999999873

>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}

Probab=97.39  E-value=0.00067  Score=37.47  Aligned_cols=16  Identities=25%  Similarity=0.196  Sum_probs=14.3

Q ss_pred             EEEEEeCCCCCcCCCC
Q 044418            2 QRLLIVPPELAYGSKG   17 (41)
Q Consensus         2 ~~~l~ip~~layg~~g   17 (41)
                      ++++.|||+.|||+.+
T Consensus        57 ~~~v~ippe~aYG~~~   72 (171)
T 2k8i_A           57 KFDVAVGANDAYGQYD   72 (171)
T ss_dssp             EEEEEEETTTSSCCCC
T ss_pred             EEEEEECcHHhcCCCC
Confidence            6899999999999874

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=97.38  E-value=0.00032  Score=42.07  Aligned_cols=38  Identities=29%  Similarity=0.537  Sum_probs=33.7

Q ss_pred             EEEEEeCCCCCcCCCCCC--CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGVQ--EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~--~ip~~s~lvf~iel~~~~~~   39 (41)
                      ++.+.++|++||+..|..  .||+++.+.|++++.++.+.
T Consensus       214 ~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A  253 (457)
T 1kt0_A          214 QCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKA  253 (457)
T ss_dssp             EEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECC
T ss_pred             EEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccC
Confidence            458999999999999975  59999999999999998765

>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A

Probab=97.03  E-value=0.0013  Score=38.04  Aligned_cols=16  Identities=38%  Similarity=0.916  Sum_probs=14.5

Q ss_pred             EEEEEeCCCCCcCCCC
Q 044418            2 QRLLIVPPELAYGSKG   17 (41)
Q Consensus         2 ~~~l~ip~~layg~~g   17 (41)
                      ++++.|||++|||+.+
T Consensus        69 k~~v~Ippe~AYGe~~   84 (231)
T 3prb_A           69 EREVVLPPEKAFGKRD   84 (231)
T ss_dssp             EEEEEECGGGTTCCCC
T ss_pred             EEEEEeCcHHhcCCCC
Confidence            6899999999999875

>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5

Probab=96.12  E-value=0.0093  Score=36.56  Aligned_cols=33  Identities=9%  Similarity=0.123  Sum_probs=27.9

Q ss_pred             EEEEEeCCCCCcCCCCCCCCCCCCeEEEEEEEEEeee
Q 044418            2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~ip~~s~lvf~iel~~~~~   38 (41)
                      ++.+.+|+..+||..+    .++.+++|+|+|+++..
T Consensus       210 ~~~v~v~~~~~yg~~~----lag~~~~F~V~v~~v~~  242 (432)
T 1w26_A          210 EFTIDVTFPEEYHAEN----LKGKAAKFAINLKKVEE  242 (432)
T ss_dssp             EEEEEEECCTTCSCTT----TSSCEEEEEEECCEECC
T ss_pred             EEEEEECCchhhCCCC----CCCceEEEEEEEEEEec
Confidence            5788999999999765    36689999999999864

>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A

Probab=94.16  E-value=0.022  Score=31.00  Aligned_cols=17  Identities=35%  Similarity=0.827  Sum_probs=15.0

Q ss_pred             EEEEEeCCCCCcCCCCC
Q 044418            2 QRLLIVPPELAYGSKGV   18 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~   18 (41)
                      ++++.|||++|||+.+.
T Consensus        69 ~~~v~Ipp~~aYG~~~~   85 (157)
T 3pr9_A           69 EREVVLPPEKAFGKRDP   85 (157)
T ss_dssp             EEEEEECGGGTTCCCCG
T ss_pred             EEEEEECcHHhcCCCCh
Confidence            68999999999998753

>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1

Probab=93.85  E-value=0.029  Score=30.05  Aligned_cols=17  Identities=29%  Similarity=0.671  Sum_probs=14.7

Q ss_pred             EEEEEeCCCCCcCCCCC
Q 044418            2 QRLLIVPPELAYGSKGV   18 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~   18 (41)
                      ++++.|||++|||+.+.
T Consensus        70 ~~~v~ipp~~aYG~~~~   86 (151)
T 1ix5_A           70 EKTVKIPAEKAYGNRNE   86 (151)
T ss_dssp             CCEEEECTTTSSCSCCS
T ss_pred             EEEEEECcHHHCCCCCc
Confidence            57899999999998764

>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}

Probab=92.22  E-value=0.13  Score=28.84  Aligned_cols=17  Identities=24%  Similarity=0.147  Sum_probs=14.8

Q ss_pred             EEEEEeCCCCCcCCCCC
Q 044418            2 QRLLIVPPELAYGSKGV   18 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~   18 (41)
                      +++|.|||++|||+.+.
T Consensus        57 ~~~v~Ippe~aYGe~~~   73 (196)
T 2kfw_A           57 KFDVAVGANDAYGQYDE   73 (196)
T ss_dssp             EEEEECSTTTTSSCCCT
T ss_pred             EEEEEeCcHHhcCCCCh
Confidence            68999999999998753

>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}

Probab=92.09  E-value=0.085  Score=28.22  Aligned_cols=16  Identities=31%  Similarity=0.511  Sum_probs=14.3

Q ss_pred             EEEEEeCCCCCcCCCC
Q 044418            2 QRLLIVPPELAYGSKG   17 (41)
Q Consensus         2 ~~~l~ip~~layg~~g   17 (41)
                      ++++.|||++|||+.+
T Consensus        62 ~~~v~ipp~~aYG~~~   77 (151)
T 2kr7_A           62 WEEVVIAPEEAYGVYE   77 (151)
T ss_dssp             EEEEEECGGGTTCSSC
T ss_pred             EEEEEEecHHHcCCCC
Confidence            6889999999999875

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}

Probab=91.28  E-value=0.095  Score=28.85  Aligned_cols=16  Identities=19%  Similarity=0.490  Sum_probs=14.0

Q ss_pred             EEEEEeCCCCCcCCCC
Q 044418            2 QRLLIVPPELAYGSKG   17 (41)
Q Consensus         2 ~~~l~ip~~layg~~g   17 (41)
                      ++++.|||++|||+..
T Consensus        80 ~~~v~Ipp~~AYG~~~   95 (169)
T 4dt4_A           80 KTTFSLEPDAAFGVPS   95 (169)
T ss_dssp             EEEEEECGGGTTCCCC
T ss_pred             EEEEEEChHHhcCCCC
Confidence            6899999999999853

>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*

Probab=89.97  E-value=0.15  Score=27.61  Aligned_cols=16  Identities=38%  Similarity=0.466  Sum_probs=14.1

Q ss_pred             EEEEEeCCCCCcCCCC
Q 044418            2 QRLLIVPPELAYGSKG   17 (41)
Q Consensus         2 ~~~l~ip~~layg~~g   17 (41)
                      ++++.|||+.|||+.+
T Consensus        52 ~~~v~ipp~~aYG~~~   67 (158)
T 3cgm_A           52 AFQAHVPAEKAYGPHD   67 (158)
T ss_dssp             EEEEEECGGGTTCCCC
T ss_pred             EEEEEECcHHHcCCCC
Confidence            6889999999999764

>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A

Probab=87.80  E-value=0.31  Score=29.56  Aligned_cols=32  Identities=6%  Similarity=0.090  Sum_probs=22.2

Q ss_pred             EEEEeCCCCCcCCCCCCCCCCCCeEEEEEEEEEeee
Q 044418            3 RLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         3 ~~l~ip~~layg~~g~~~ip~~s~lvf~iel~~~~~   38 (41)
                      +++.|+....||..+    .+|.+++|+|+|+++..
T Consensus       214 ~~v~v~fp~dy~~~~----laGk~~~F~V~v~~i~~  245 (392)
T 1t11_A          214 FVIDVTFPEDYHAEN----LKGKAAKFAIKVNKVEA  245 (392)
T ss_dssp             CCEEEECCTTCSCTT----TSSCEEEECCCEEEEEE
T ss_pred             EEEEEeCccccccCC----CCCCeEEEEEEEEEEEc
Confidence            345565334576533    36789999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	41
d1q6ha_	210	d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase	6e-12
d1fd9a_	204	d.26.1.1 (A:) Macrophage infectivity potentiator p	1e-11
d1kt1a3	115	d.26.1.1 (A:139-253) FKBP51, N-terminal domains {M	7e-10
d1u79a_	125	d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis tha	4e-09
d1kt1a2	111	d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Mo	4e-09
d1q1ca1	120	d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Hu	5e-09
d1jvwa_	160	d.26.1.1 (A:) Macrophage infectivity potentiator p	7e-09
d2ppna1	107	d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12)	1e-08
d1r9ha_	118	d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabd	4e-08
d1q1ca2	117	d.26.1.1 (A:141-257) FKBP52, N-terminal domains {H	5e-08
d1pbka_	116	d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId:	5e-08
d1yata_	113	d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeas	9e-08
d1hxva_	85	d.26.1.1 (A:) Trigger factor PPIase domain {Mycopl	1e-04

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]} Length = 210

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

 Score = 54.5 bits (130), Expect = 6e-12
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 2   QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIK 37
           +  L++PPELAYG  GV  IPPN+T+  DVELL +K
Sbjct: 175 KIKLVIPPELAYGKAGVPGIPPNSTLVFDVELLDVK 210

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]} Length = 204

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

 Score = 53.3 bits (127), Expect = 1e-11
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 3   RLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIKQS 39
             + VP  LAYG + V   I PN T+   + L+++K+S
Sbjct: 167 WEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS 204

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 115

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 47.4 bits (112), Expect = 7e-10
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 1   MQRLLIVPPELAYGSKGVQE--IPPNATIEIDVELLAIKQS 39
            Q +L + P   +G  G  +  I PNA +  +V L + +++
Sbjct: 75  EQCILHLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKA 115

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 125

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.6 bits (107), Expect = 4e-09
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 6/42 (14%)

Query: 1   MQRLLIVPPELAYGSKGV------QEIPPNATIEIDVELLAI 36
            +R L +PPELAYG +G         IPP + +  D+E +  
Sbjct: 83  GKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 124

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 111

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 45.1 bits (106), Expect = 4e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 1   MQRLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAIK 37
               L+  PE AYG+ G   +IP NAT+  +VELL  K
Sbjct: 74  EICHLLCKPEYAYGATGSLPKIPSNATLFFEVELLDFK 111

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 5e-09
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 1   MQRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIK 37
               +   PE AYGS G    IPPNAT+  +VEL   K
Sbjct: 81  EVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFK 118

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]} Length = 160

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 45.6 bits (107), Expect = 7e-09
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 1   MQRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIKQSP 40
            +  L +P +LAYG  G    IPP + +E DVEL++IK   
Sbjct: 102 DRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGG 142

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 1e-08
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 1   MQRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAIK 37
            +  L + P+ AYG+ G    IPP+AT+  DVELL ++
Sbjct: 70  QRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE 107

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]} Length = 118

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.8 bits (100), Expect = 4e-08
 Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 1/38 (2%)

Query: 1   MQRLLIVPPELAYGSKGV-QEIPPNATIEIDVELLAIK 37
                 +  +  YG  G   +IP  AT+  +VEL    
Sbjct: 80  EVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWS 117

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 5e-08
 Identities = 11/41 (26%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 1   MQRLLIVPPELAYGSKGVQE--IPPNATIEIDVELLAIKQS 39
              ++ + P  A+GS G ++  IPPNA ++ ++ L + +++
Sbjct: 75  EHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKA 115

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 5e-08
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 1   MQRLLIVPPELAYGSKGVQE--IPPNATIEIDVELLAI 36
            +  L + PE AYG KG  +  IPPNA +  +VEL+ I
Sbjct: 78  EKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDI 115

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 113

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.1 bits (98), Expect = 9e-08
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 1   MQRLLIVPPELAYGSKGVQE-IPPNATIEIDVELLAI 36
            +  L +P   AYG +G    IPPN+T+  DVELL +
Sbjct: 76  EKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112

>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]} Length = 85

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Mycoplasma genitalium [TaxId: 2097]

 Score = 33.4 bits (76), Expect = 1e-04
 Identities = 8/36 (22%), Positives = 14/36 (38%), Gaps = 4/36 (11%)

Query: 2  QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIK 37
          ++ L +     Y  K       +  +  +V L AIK
Sbjct: 54 KKTLALTFPSDYHVKE----LQSKPVTFEVVLKAIK 85

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	41
d1fd9a_	204	Macrophage infectivity potentiator protein (MIP) {	99.61
d1q6ha_	210	Peptidyl-prolyl cis-trans isomerase FkpA {Escheric	99.6
d1kt1a3	115	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.56
d2ppna1	107	FK-506 binding protein (FKBP12), an immunophilin {	99.54
d1kt1a2	111	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.52
d1q1ca2	117	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.52
d1yata_	113	Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc	99.51
d1r9ha_	118	FKB-6, N-terminal domain {Caenorhabditis elegans [	99.51
d1q1ca1	120	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.5
d1jvwa_	160	Macrophage infectivity potentiator protein (MIP) {	99.49
d1pbka_	116	FKBP25 {Human (Homo sapiens) [TaxId: 9606]}	99.44
d1u79a_	125	FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId:	99.4
d1hxva_	85	Trigger factor PPIase domain {Mycoplasma genitaliu	96.43
d2diga1	55	Lamin-b receptor {Human (Homo sapiens) [TaxId: 960	94.35
d1ix5a_	151	Archaeal FKBP {Archaeon Methanococcus thermolithot	84.56

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

Probab=99.61  E-value=3.4e-16  Score=87.06  Aligned_cols=38  Identities=37%  Similarity=0.648  Sum_probs=35.5

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~~   39 (41)
                      +|+|+|||+||||+.|.+ .|||||+|+|+|||++|+++
T Consensus       166 ~~~~~iP~~laYG~~g~~~~Ipp~s~l~feveL~~i~k~  204 (204)
T d1fd9a_         166 TWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS  204 (204)
T ss_dssp             EEEEEECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEECC
T ss_pred             EEEEEEChHHCcCCCCCCCCcCcCCcEEEEEEEEEEEcC
Confidence            799999999999999986 49999999999999999874

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=4e-16  Score=87.16  Aligned_cols=36  Identities=58%  Similarity=1.015  Sum_probs=34.5

Q ss_pred             EEEEEeCCCCCcCCCCCCCCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~ip~~s~lvf~iel~~~~   37 (41)
                      +|+++|||++|||++|.+.|||||+|+|+|||++|+
T Consensus       175 k~~~~iP~~laYG~~g~~~Ippns~Lvfevel~~ik  210 (210)
T d1q6ha_         175 KIKLVIPPELAYGKAGVPGIPPNSTLVFDVELLDVK  210 (210)
T ss_dssp             EEEEEECGGGTTTTTCBTTBCTTCCEEEEEEEEEEC
T ss_pred             EEEEEECHHHCcCCCCCCCCCcCCcEEEEEEEEEEC
Confidence            799999999999999998999999999999999985

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.56  E-value=2.1e-15  Score=77.22  Aligned_cols=38  Identities=29%  Similarity=0.524  Sum_probs=35.3

Q ss_pred             EEEEEeCCCCCcCCCCCC--CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGVQ--EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~--~ip~~s~lvf~iel~~~~~~   39 (41)
                      +++++|||++|||+.|.+  .|||||+|+|+|||++++++
T Consensus        76 ~~~v~ip~~~ayG~~g~~~~~Ipp~a~l~f~ieLl~~~ka  115 (115)
T d1kt1a3          76 QCILHLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKA  115 (115)
T ss_dssp             EEEEEECGGGSSCTTCBTTTTBCTTCCEEEEEEEEEEECC
T ss_pred             eeEEEeCHHHCcCCCCCCCCCcCcCCeEEEEEEEEEEEeC
Confidence            799999999999999986  49999999999999999874

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=3.7e-15  Score=76.10  Aligned_cols=36  Identities=44%  Similarity=0.798  Sum_probs=33.6

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      +++++|||++|||++|.+ .|||||+|+|+|||++++
T Consensus        71 ~~~~~ip~~laYG~~g~~~~IPp~s~lif~ieL~~vk  107 (107)
T d2ppna1          71 RAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE  107 (107)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred             EEEEEECHHHhCCCCCCCCCCCcCCeEEEEEEEEEEC
Confidence            789999999999999986 599999999999999985

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.52  E-value=5.1e-15  Score=76.07  Aligned_cols=36  Identities=47%  Similarity=0.711  Sum_probs=29.5

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      +++++|||++|||++|.. .|||||+|+|+|||++|+
T Consensus        75 ~~~~~ip~~layG~~g~~~~IPp~s~lif~ieLl~ik  111 (111)
T d1kt1a2          75 ICHLLCKPEYAYGATGSLPKIPSNATLFFEVELLDFK  111 (111)
T ss_dssp             CEEEEC----CCCTTTCTTTSCTTCCCEEEEEEEEEE
T ss_pred             EEEEEECHHHhCCCCCCCCcCCcCCeEEEEEEEEEEC
Confidence            689999999999999986 599999999999999985

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=8.6e-15  Score=75.18  Aligned_cols=39  Identities=28%  Similarity=0.663  Sum_probs=36.1

Q ss_pred             EEEEEeCCCCCcCCCCCC--CCCCCCeEEEEEEEEEeeeCC
Q 044418            2 QRLLIVPPELAYGSKGVQ--EIPPNATIEIDVELLAIKQSP   40 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~--~ip~~s~lvf~iel~~~~~~~   40 (41)
                      +|+++|||++|||+.|.+  .|||+|+|+|+|||+++++.+
T Consensus        76 ~~~i~ip~~~ayG~~g~~~~~Ipp~s~l~f~veL~~~~~~k  116 (117)
T d1q1ca2          76 HSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAK  116 (117)
T ss_dssp             EEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCC
T ss_pred             eEEEEECHHHhCcccCCCCCccCcCCeEEEEEEEEEEEeCC
Confidence            799999999999999975  599999999999999999865

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.51  E-value=9.9e-15  Score=74.96  Aligned_cols=36  Identities=44%  Similarity=0.796  Sum_probs=33.5

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      |++++|||++|||++|.+ .||+||+|+|+|||+++.
T Consensus        77 ~~~~~iP~~laYG~~g~~~~IP~~s~Lif~ieLl~I~  113 (113)
T d1yata_          77 KARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKVN  113 (113)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred             EEEEEechHHeecCcCCCCccCcCCeEEEEEEEEEeC
Confidence            799999999999999987 499999999999999874

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.51  E-value=1.1e-14  Score=75.56  Aligned_cols=36  Identities=28%  Similarity=0.499  Sum_probs=33.8

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~   37 (41)
                      +|+++|||++|||++|.+ .|||||+|+|+|||++|.
T Consensus        81 ~~~~~ipp~laYG~~g~~~~IPp~s~l~f~IeLl~f~  117 (118)
T d1r9ha_          81 VAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWS  117 (118)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred             eEEEEECHHHhCCcCCCCCccCcCCcEEEEEEEEEEe
Confidence            789999999999999986 599999999999999986

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.2e-14  Score=75.68  Aligned_cols=37  Identities=46%  Similarity=0.731  Sum_probs=34.4

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeee
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQ   38 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~   38 (41)
                      +++++|||++|||++|.+ .|||||+|+|+|||++++.
T Consensus        82 ~~~~~ip~~laYG~~g~~~~IPp~s~LifeIeLl~v~~  119 (120)
T d1q1ca1          82 VCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKG  119 (120)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             EEEEEECHHHhCCCcCCCCCCCcCCcEEEEEEEEEEeC
Confidence            789999999999999986 5999999999999999974

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.49  E-value=1.5e-14  Score=78.32  Aligned_cols=38  Identities=45%  Similarity=0.769  Sum_probs=35.0

Q ss_pred             EEEEEeCCCCCcCCCCCC-CCCCCCeEEEEEEEEEeeeC
Q 044418            2 QRLLIVPPELAYGSKGVQ-EIPPNATIEIDVELLAIKQS   39 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~-~ip~~s~lvf~iel~~~~~~   39 (41)
                      +++++|||++|||..|.. .||||++|+|+|||++|++.
T Consensus       103 ~~~v~iPp~laYG~~g~~~~IPp~s~LifeIeLl~i~~~  141 (160)
T d1jvwa_         103 RWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDG  141 (160)
T ss_dssp             EEEEEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGG
T ss_pred             eeEEEeCHHHCcCCCCCCCCcCcCCcEEEEEEEEEEecC
Confidence            789999999999999876 59999999999999999764

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=4.9e-14  Score=72.58  Aligned_cols=36  Identities=47%  Similarity=0.816  Sum_probs=33.3

Q ss_pred             EEEEEeCCCCCcCCCCCC--CCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQ--EIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~--~ip~~s~lvf~iel~~~~   37 (41)
                      +++++|||++|||++|.+  .|||||+|+|+|||++++
T Consensus        79 ~~~~~ip~~~ayG~~g~~~~~Ipp~s~L~feieLl~ve  116 (116)
T d1pbka_          79 KARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDID  116 (116)
T ss_dssp             EEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred             EEEEEECHHHhCCccCCCCCCcCcCCeEEEEEEEEEEC
Confidence            789999999999999985  599999999999999985

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.40  E-value=5e-14  Score=73.09  Aligned_cols=35  Identities=43%  Similarity=0.846  Sum_probs=31.7

Q ss_pred             EEEEEeCCCCCcCCCCCC------CCCCCCeEEEEEEEEEe
Q 044418            2 QRLLIVPPELAYGSKGVQ------EIPPNATIEIDVELLAI   36 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~------~ip~~s~lvf~iel~~~   36 (41)
                      |++++|||++|||++|.+      .|||||+|+|||||+++
T Consensus        84 k~~v~iP~~laYG~~G~~~~~~~~~IPp~s~LifeieLl~~  124 (125)
T d1u79a_          84 KRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK  124 (125)
T ss_dssp             EEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred             EEEEEECHHHCCCCCCcCCcCCCCcCCcCCeEEEEEEEEEe
Confidence            799999999999999852      39999999999999986

>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Mycoplasma genitalium [TaxId: 2097]

Probab=96.43  E-value=0.00099  Score=31.58  Aligned_cols=32  Identities=25%  Similarity=0.282  Sum_probs=26.5

Q ss_pred             EEEEEeCCCCCcCCCCCCCCCCCCeEEEEEEEEEee
Q 044418            2 QRLLIVPPELAYGSKGVQEIPPNATIEIDVELLAIK   37 (41)
Q Consensus         2 ~~~l~ip~~layg~~g~~~ip~~s~lvf~iel~~~~   37 (41)
                      ++++.|++..+|+.++    .+|.++.|+|+|.+++
T Consensus        54 ~~~~~i~~p~~y~~~~----laGk~~~f~V~v~~Vk   85 (85)
T d1hxva_          54 KKTLALTFPSDYHVKE----LQSKPVTFEVVLKAIK   85 (85)
T ss_dssp             EEEECCCCCTTSSSSG----GGSCCCEEEEEECCBC
T ss_pred             eEEEEEEChhhcCccc----CCCCcEEEEEEEEEeC
Confidence            5788899999998865    4678999999998764

>d2diga1 b.34.9.1 (A:8-62) Lamin-b receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: Tudor/PWWP/MBT
family: Tudor domain
domain: Lamin-b receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.35  E-value=0.018  Score=25.84  Aligned_cols=18  Identities=22%  Similarity=0.420  Sum_probs=15.2

Q ss_pred             CCCCeEEEEEEEEEeeeC
Q 044418           22 PPNATIEIDVELLAIKQS   39 (41)
Q Consensus        22 p~~s~lvf~iel~~~~~~   39 (41)
                      =|+|+|.|+++++++...
T Consensus        16 wPgSsLyyev~vls~d~~   33 (55)
T d2diga1          16 WPGSSLYYEVEILSHDST   33 (55)
T ss_dssp             CTTTCCEEEEEEEEEETT
T ss_pred             cCCCceEEEEEEEeecCc
Confidence            379999999999988653

>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Archaeal FKBP
species: Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]

Probab=84.56  E-value=0.24  Score=25.13  Aligned_cols=16  Identities=31%  Similarity=0.752  Sum_probs=13.5

Q ss_pred             EEEEEeCCCCCcCCCC
Q 044418            2 QRLLIVPPELAYGSKG   17 (41)
Q Consensus         2 ~~~l~ip~~layg~~g   17 (41)
                      ++++.|||+.|||+..
T Consensus        70 ~~~v~i~p~~ayG~~d   85 (151)
T d1ix5a_          70 EKTVKIPAEKAYGNRN   85 (151)
T ss_dssp             CCEEEECTTTSSCSCC
T ss_pred             eeEEEeCHHHhccccc
Confidence            4689999999999754