Query 044420
Match_columns 545
No_of_seqs 580 out of 3169
Neff 9.8
Searched_HMMs 13730
Date Mon Mar 25 04:51:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044420.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044420hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1n11a_ d.211.1.1 (A:) Ankyrin 100.0 1.3E-45 9.2E-50 375.6 28.0 330 10-372 1-374 (408)
2 d1n11a_ d.211.1.1 (A:) Ankyrin 100.0 1.4E-40 1E-44 338.1 25.9 307 5-328 29-382 (408)
3 d1uoha_ d.211.1.1 (A:) 26S pro 100.0 1.1E-37 8.2E-42 289.5 21.2 218 9-328 3-220 (223)
4 d1oy3d_ d.211.1.1 (D:) Transcr 100.0 4.4E-38 3.2E-42 298.5 18.4 97 41-140 4-103 (255)
5 d2fo1e1 d.211.1.1 (E:1021-1297 100.0 2E-38 1.5E-42 304.5 13.9 265 10-329 1-274 (277)
6 d1uoha_ d.211.1.1 (A:) 26S pro 100.0 9.5E-36 6.9E-40 276.4 20.0 217 46-378 3-219 (223)
7 d1wdya_ d.211.1.1 (A:) RNase L 100.0 9.2E-35 6.7E-39 280.0 26.4 271 7-307 3-284 (285)
8 d1s70b_ d.211.1.1 (B:) Myosin 100.0 7.2E-36 5.2E-40 288.9 16.3 243 44-328 38-280 (291)
9 d1oy3d_ d.211.1.1 (D:) Transcr 100.0 2.3E-35 1.6E-39 279.7 19.1 231 75-329 3-245 (255)
10 d1ixva_ d.211.1.1 (A:) 26S pro 100.0 1.5E-34 1.1E-38 269.3 20.5 126 10-140 1-130 (229)
11 d1ixva_ d.211.1.1 (A:) 26S pro 100.0 5.5E-34 4E-38 265.4 21.9 219 47-328 1-222 (229)
12 d1wdya_ d.211.1.1 (A:) RNase L 100.0 6.6E-34 4.8E-38 273.9 22.7 265 45-359 4-284 (285)
13 d1k1aa_ d.211.1.1 (A:) bcl-3 { 100.0 1.7E-32 1.2E-36 253.2 21.0 224 45-326 2-227 (228)
14 d1s70b_ d.211.1.1 (B:) Myosin 100.0 1.4E-33 1E-37 272.7 14.1 248 6-296 37-285 (291)
15 d2fo1e1 d.211.1.1 (E:1021-1297 100.0 9.6E-33 7E-37 264.6 18.0 236 6-294 30-276 (277)
16 d1iknd_ d.211.1.1 (D:) I-kappa 100.0 1.6E-32 1.1E-36 254.2 12.6 194 45-329 1-198 (221)
17 d1iknd_ d.211.1.1 (D:) I-kappa 100.0 2.3E-31 1.7E-35 246.2 14.5 196 8-297 1-203 (221)
18 d1ot8a_ d.211.1.1 (A:) Neuroge 100.0 5E-30 3.7E-34 234.8 17.1 206 59-328 2-208 (209)
19 d1k1aa_ d.211.1.1 (A:) bcl-3 { 100.0 1.1E-29 7.7E-34 234.2 19.0 221 8-289 2-227 (228)
20 d2ajaa1 a.118.24.1 (A:3-348) H 100.0 1.2E-30 9E-35 257.6 3.5 235 6-294 87-339 (346)
21 d1ihba_ d.211.1.1 (A:) p18ink4 99.9 1.8E-27 1.3E-31 206.9 17.0 154 48-295 3-156 (156)
22 d2ajaa1 a.118.24.1 (A:3-348) H 99.9 7.8E-30 5.7E-34 251.8 1.9 239 41-331 85-339 (346)
23 d1ot8a_ d.211.1.1 (A:) Neuroge 99.9 4.9E-26 3.6E-30 207.9 19.3 207 22-291 2-208 (209)
24 d1ihba_ d.211.1.1 (A:) p18ink4 99.9 2.9E-26 2.1E-30 199.2 16.2 121 11-139 3-123 (156)
25 d1bd8a_ d.211.1.1 (A:) Cell cy 99.9 3.7E-26 2.7E-30 198.6 16.8 151 49-294 5-155 (156)
26 d1sw6a_ d.211.1.1 (A:) Swi6 an 99.9 1.1E-26 8.1E-31 224.8 13.7 200 70-317 95-300 (301)
27 d1awcb_ d.211.1.1 (B:) GA bind 99.9 1.3E-25 9.5E-30 194.4 16.8 149 48-291 4-152 (153)
28 d1bd8a_ d.211.1.1 (A:) Cell cy 99.9 9.3E-25 6.8E-29 189.6 16.6 151 11-171 4-154 (156)
29 d1sw6a_ d.211.1.1 (A:) Swi6 an 99.9 4.6E-26 3.3E-30 220.5 7.7 196 37-280 98-300 (301)
30 d1awcb_ d.211.1.1 (B:) GA bind 99.9 4.3E-24 3.1E-28 184.6 15.6 144 9-160 2-145 (153)
31 d1bi7b_ d.211.1.1 (B:) Cell cy 99.9 8.8E-25 6.4E-29 181.8 10.5 120 9-136 3-123 (125)
32 d1myoa_ d.211.1.1 (A:) Myotrop 99.9 3.2E-25 2.3E-29 182.4 3.4 105 11-122 4-108 (118)
33 d1ycsb1 d.211.1.1 (B:327-456) 99.9 5.9E-24 4.3E-28 178.0 9.8 122 11-139 3-127 (130)
34 d1myoa_ d.211.1.1 (A:) Myotrop 99.9 5.6E-24 4.1E-28 174.9 6.3 104 47-153 3-106 (118)
35 d1dcqa1 d.211.1.1 (A:369-522) 99.9 1.4E-22 1E-26 174.1 14.7 125 10-140 7-139 (154)
36 d1bi7b_ d.211.1.1 (B:) Cell cy 99.9 2.2E-22 1.6E-26 167.1 10.7 118 45-167 2-120 (125)
37 d1ycsb1 d.211.1.1 (B:327-456) 99.9 2.1E-22 1.5E-26 168.4 10.1 115 48-165 3-119 (130)
38 d1dcqa1 d.211.1.1 (A:369-522) 99.8 4E-20 2.9E-24 158.5 15.8 89 49-140 9-106 (154)
39 d1ppjw_ f.23.14.1 (W:) Subunit 39.3 21 0.0016 22.7 4.2 33 513-545 26-58 (62)
40 d2iuba2 f.17.3.1 (A:286-349) M 29.4 23 0.0017 22.6 3.3 20 475-494 9-28 (64)
41 d3cx5i1 f.23.14.1 (I:4-58) Sub 20.8 23 0.0017 21.9 1.8 31 515-545 22-52 (55)
No 1
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.3e-45 Score=375.59 Aligned_cols=330 Identities=19% Similarity=0.172 Sum_probs=277.2
Q ss_pred CHHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHH
Q 044420 10 CVPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAV 89 (545)
Q Consensus 10 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~ 89 (545)
.||||.||..|+.++|++|++ .| .+++ ..|..|+||||+||..|+.++|++|++ +|++++.+|.+|.||||+|+
T Consensus 1 ~TpL~~Aa~~g~~~~v~~Ll~--~g-~~in-~~d~~g~TpL~~A~~~g~~~iv~~Ll~--~gadi~~~~~~g~t~L~~A~ 74 (408)
T d1n11a_ 1 LTPLHVASFMGHLPIVKNLLQ--RG-ASPN-VSNVKVETPLHMAARAGHTEVAKYLLQ--NKAKVNAKAKDDQTPLHCAA 74 (408)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH--TT-CCSC-CSSSCCCCHHHHHHHHTCHHHHHHHHH--HTCCSSCCCTTSCCHHHHHH
T ss_pred CChHHHHHHCcCHHHHHHHHH--CC-CCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHH--CcCCCCCCCCCCCCHHHHHH
Confidence 499999999999999999999 67 7776 789999999999999999999999999 79999999999999999999
Q ss_pred HhCCHHHHHHHHHcCcccc--------------------------------cCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 044420 90 AAGSIHIAKIMLKKNERLL--------------------------------TMRGGENMTPLYMAAVLAQRDMALYLYDD 137 (545)
Q Consensus 90 ~~g~~~iv~~Ll~~~~~~~--------------------------------~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~ 137 (545)
..|+.+++++|+..+++.. ...+.++.++++.|+..++.+++++|+++
T Consensus 75 ~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~ 154 (408)
T d1n11a_ 75 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 154 (408)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999997654321 34577899999999999999999999999
Q ss_pred ccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccch---------hhHh
Q 044420 138 AKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGL---------LTRL 208 (545)
Q Consensus 138 ~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~---------~~~~ 208 (545)
+++++..+..+.+||++|+..+.. + +.++|..+|.+++..+..|.||+|.++.....+....+.. ..+.
T Consensus 155 ~~~~~~~~~~~~~~L~~A~~~~~~-~-~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 232 (408)
T d1n11a_ 155 DAHPNAAGKNGLTPLHVAVHHNNL-D-IVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGV 232 (408)
T ss_dssp TCCTTCCCSSCCCHHHHHHHTTCH-H-HHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCCCcCCCcCchHHHHHHHcCCH-H-HHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCC
Confidence 999888899999999998877653 4 5577777899999999999999999998876543322211 0000
Q ss_pred HHHH---HHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCch
Q 044420 209 MHSA---LQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHA 285 (545)
Q Consensus 209 ~~~~---~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~ 285 (545)
+... ..--..+++...... ...+..+..|.||++.|++.++.+++++|+++|++ ++..+..+.||||.|+..++.
T Consensus 233 t~l~~a~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~-~~~~~~~~~t~L~~~~~~~~~ 310 (408)
T d1n11a_ 233 TPLHLAAQEGHAEMVALLLSKQ-ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNI 310 (408)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCS
T ss_pred CHHHHHHHhCcHhHhhhhhccc-cccccccCCCCChhhhhhhcCcHHHHHHHHHCCCc-cccccccccccchhhcccCcc
Confidence 0000 000012334444443 44555678899999999999999999999999999 899999999999999999999
Q ss_pred HHHHHHHhhccchhhhhhcccCCCCChhhhhccCCCCCccccccchhHHhHHHHhHHHHHhhhhcCccccccCCCCCChh
Q 044420 286 NIFNLIYEIGFTKELMATFKDHDQNNMLHLAAKSPHPSRVSIVSGAALQMHRELLWFKEVEKIVQPTFREMKNSEGKTPR 365 (545)
Q Consensus 286 ~iv~~Ll~~g~~~~~~~n~~d~~G~TpLh~A~~~~~~~~~~~L~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl 365 (545)
++++++++.|++ +|.+|.+|+||||+|+++|+.+++++|.+ +|++++.+|++|+|||
T Consensus 311 ~~~~~ll~~g~~----in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~-------------------~GAd~n~~d~~G~t~L 367 (408)
T d1n11a_ 311 KLVKFLLQHQAD----VNAKTKLGYSPLHQAAQQGHTDIVTLLLK-------------------NGASPNEVSSDGTTPL 367 (408)
T ss_dssp HHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------------------TTCCSCCCCSSSCCHH
T ss_pred eeeeeecccccc----ccccCCCCCCHHHHHHHcCCHHHHHHHHH-------------------CCCCCCCCCCCCCCHH
Confidence 999999999998 88999999999999999999999888743 3889999999999999
Q ss_pred hhhHhhh
Q 044420 366 ELFSIEH 372 (545)
Q Consensus 366 ~~a~~~~ 372 (545)
|+|++..
T Consensus 368 ~~A~~~~ 374 (408)
T d1n11a_ 368 AIAKRLG 374 (408)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998764
No 2
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.4e-40 Score=338.08 Aligned_cols=307 Identities=21% Similarity=0.189 Sum_probs=255.4
Q ss_pred ccccCCHHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCC--------------
Q 044420 5 VYLNICVPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMK-------------- 70 (545)
Q Consensus 5 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~-------------- 70 (545)
.+.+|+||||+||+.|+.+++++|++ +| ++++ .++.+|+||||+|+..|+.+++++|+....
T Consensus 29 ~d~~g~TpL~~A~~~g~~~iv~~Ll~--~g-adi~-~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~ 104 (408)
T d1n11a_ 29 SNVKVETPLHMAARAGHTEVAKYLLQ--NK-AKVN-AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLH 104 (408)
T ss_dssp SSSCCCCHHHHHHHHTCHHHHHHHHH--HT-CCSS-CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHH--Cc-CCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHhhhccccccccccchhh
Confidence 45679999999999999999999999 67 7666 789999999999999999999999986311
Q ss_pred -----------------CcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHH
Q 044420 71 -----------------PEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALY 133 (545)
Q Consensus 71 -----------------~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~ 133 (545)
+...+..|..|.++++.|+..++.++++.|+++|+++ +..+.+|.+|||+|+..|+.+++++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~-~~~~~~~~~~L~~A~~~~~~~~~~~ 183 (408)
T d1n11a_ 105 IAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKL 183 (408)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSCCCHHHHHHHTTCHHHHHH
T ss_pred hhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCcCchHHHHHHHcCCHHHHHH
Confidence 1223556788999999999999999999999999997 8899999999999999999999999
Q ss_pred HHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccch---------
Q 044420 134 LYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGL--------- 204 (545)
Q Consensus 134 Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~--------- 204 (545)
|+++|++++..+..|.+|++.+...... .....+...+......+.+|.||||+|+..++.+..+....
T Consensus 184 Ll~~g~~~~~~~~~~~t~l~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 261 (408)
T d1n11a_ 184 LLPRGGSPHSPAWNGYTPLHIAAKQNQV--EVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN 261 (408)
T ss_dssp HGGGTCCSCCCCTTCCCHHHHHHHTTCH--HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred HHhcCCcccccCCCCCCcchhhhccchh--hhhhhhhhccccccccCCCCCCHHHHHHHhCcHhHhhhhhcccccccccc
Confidence 9999999888899999999988776542 44455556666667778888888888888876554332221
Q ss_pred hh-------HhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHH
Q 044420 205 LT-------RLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFH 277 (545)
Q Consensus 205 ~~-------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh 277 (545)
.. .......++++.+++. + .+.+..+..+.||||.++..++.++++++++.|++ ++.+|.+|+||||
T Consensus 262 ~~g~~~l~~a~~~~~~~i~~~Ll~~----g-~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~-in~~d~~G~T~Lh 335 (408)
T d1n11a_ 262 KSGLTPLHLVAQEGHVPVADVLIKH----G-VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLH 335 (408)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHH----T-CCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CCCCChhhhhhhcCcHHHHHHHHHC----C-CccccccccccccchhhcccCcceeeeeecccccc-ccccCCCCCCHHH
Confidence 00 0112223444444443 3 33445567889999999999999999999999999 9999999999999
Q ss_pred HHHHhCchHHHHHHHhhccchhhhhhcccCCCCChhhhhccCCCCCccccc
Q 044420 278 IAVLHRHANIFNLIYEIGFTKELMATFKDHDQNNMLHLAAKSPHPSRVSIV 328 (545)
Q Consensus 278 ~A~~~~~~~iv~~Ll~~g~~~~~~~n~~d~~G~TpLh~A~~~~~~~~~~~L 328 (545)
+|+++|+.++|++|+++|++ +|.+|++|+||||+|++.|+.+++++|
T Consensus 336 ~A~~~g~~~iv~~Ll~~GAd----~n~~d~~G~t~L~~A~~~~~~~iv~~L 382 (408)
T d1n11a_ 336 QAAQQGHTDIVTLLLKNGAS----PNEVSSDGTTPLAIAKRLGYISVTDVL 382 (408)
T ss_dssp HHHHTTCHHHHHHHHHTTCC----SCCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999 788999999999999999999998876
No 3
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.1e-37 Score=289.46 Aligned_cols=218 Identities=21% Similarity=0.247 Sum_probs=183.0
Q ss_pred CCHHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHH
Q 044420 9 ICVPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFA 88 (545)
Q Consensus 9 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A 88 (545)
+.+.|+.+|..|+.+.|+.+++ .++ ..++ .+|..|+||||+||..|+.+++++|++ .+......+..+.++++.+
T Consensus 3 ~~~~~~~~a~~G~~~~v~~~l~-~~~-~~~~-~~D~~G~TpLh~Aa~~g~~e~~~~l~~--~~~~~~~~~~~~~~~~~~~ 77 (223)
T d1uoha_ 3 SNLMVCNLAYSGKLEELKESIL-ADK-SLAT-RTDQDSRTALHWACSAGHTEIVEFLLQ--LGVPVNDKDDAGWSPLHIA 77 (223)
T ss_dssp SSSHHHHHHHTTCHHHHHHHHH-HCG-GGGG-CCCTTSCCHHHHHHHHTCHHHHHHHHH--HTCCSCCCCTTCCCHHHHH
T ss_pred CHHHHHHHHHhCCHHHHHHHHH-hCC-CcCc-CcCCCCCCHHHHHHHhhhhcccccccc--ccccccccccccccccccc
Confidence 4678999999999999999988 455 5555 889999999999999999999999999 6788888888999999999
Q ss_pred HHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHH
Q 044420 89 VAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKL 168 (545)
Q Consensus 89 ~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~l 168 (545)
+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+.+++++|+++|++++
T Consensus 78 ~~~~~~~i~~~Ll~~~~d~-~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~-------------------------- 130 (223)
T d1uoha_ 78 ASAGRDEIVKALLGKGAQV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD-------------------------- 130 (223)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT--------------------------
T ss_pred ccccccchhHHHhccCcee-EeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCC--------------------------
Confidence 9999999999999999997 8999999999999999999999999999887622
Q ss_pred HHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhc
Q 044420 169 LEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAEL 248 (545)
Q Consensus 169 L~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~ 248 (545)
.+| ..|.||||+|+..
T Consensus 131 ---------~~~-------------------------------------------------------~~~~t~L~~a~~~ 146 (223)
T d1uoha_ 131 ---------AKD-------------------------------------------------------HYEATAMHRAAAK 146 (223)
T ss_dssp ---------CCC-------------------------------------------------------TTSCCHHHHHHHT
T ss_pred ---------CcC-------------------------------------------------------CCCCccchhhhhc
Confidence 222 4456677777777
Q ss_pred CcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHHHHHHHhhccchhhhhhcccCCCCChhhhhccCCCCCccccc
Q 044420 249 GNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANIFNLIYEIGFTKELMATFKDHDQNNMLHLAAKSPHPSRVSIV 328 (545)
Q Consensus 249 g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~n~~d~~G~TpLh~A~~~~~~~~~~~L 328 (545)
|+.+++++|++.+.+ ++.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|. .|+.++++.|
T Consensus 147 ~~~~~~~~L~~~~~~-i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad----~~~~d~~g~tpl~~A~-~~~~~i~~~L 220 (223)
T d1uoha_ 147 GNLKMIHILLYYKAS-TNIQDTEGNTPLHLACDEERVEEAKLLVSQGAS----IYIENKEEKTPLQVAK-GGLGLILKRM 220 (223)
T ss_dssp TCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHCC-TTHHHHHHHH
T ss_pred CCcchhhhhccccce-eeeccCCCCceeccccccCcHHHHHHHHHCCCC----CCCCCCCCCCHHHHHH-CCCHHHHhcc
Confidence 777788888888888 788888888888888888888888888888887 6778888888888874 5666666554
No 4
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=4.4e-38 Score=298.48 Aligned_cols=97 Identities=22% Similarity=0.231 Sum_probs=87.2
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc---cccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCc
Q 044420 41 GIAKGYETLLHLAAGARQTGFVEELLKLMKPED---LTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMT 117 (545)
Q Consensus 41 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~---~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 117 (545)
..+++|+||||+||+.|+.+++++|++ .+++ ++.+|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.|
T Consensus 4 ~i~~~G~t~Lh~A~~~~~~~~v~~Ll~--~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i-~~~d~~g~t 80 (255)
T d1oy3d_ 4 YVTEDGDTALHLAVIHQHEPFLDFLLG--FSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHT 80 (255)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHH--HHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCC
T ss_pred cCCcCCCCHHHHHHHcCCHHHHHHHHH--cCCCcccccCcCCCCCCccchHHhhcccccccccccccccc-cccccccch
Confidence 467899999999999999999999998 5665 6778889999999999999999999999999997 889999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcccC
Q 044420 118 PLYMAAVLAQRDMALYLYDDAKA 140 (545)
Q Consensus 118 pL~~A~~~g~~~iv~~Ll~~~~~ 140 (545)
|||+|+..++.+++++|++.+..
T Consensus 81 pL~~A~~~~~~~~~~~Ll~~~~~ 103 (255)
T d1oy3d_ 81 ALHLACRVRAHTCACVLLQPRPS 103 (255)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCS
T ss_pred hhhhhhccCchHHHHHHHhhccc
Confidence 99999999999999999987654
No 5
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=2e-38 Score=304.48 Aligned_cols=265 Identities=19% Similarity=0.164 Sum_probs=204.9
Q ss_pred CHHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHc------CCCcccccccCCCCc
Q 044420 10 CVPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKL------MKPEDLTLQDRNGNT 83 (545)
Q Consensus 10 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~------~~~~~~~~~d~~g~T 83 (545)
+||||.+++.+..+.+..++. ..+ ++...+++|+||||+||..|+.++|+.|+.. ..|+++|.+|.+|+|
T Consensus 1 ~~p~~~~~~~~~~~~~~~~l~-~~~---~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~T 76 (277)
T d2fo1e1 1 ESPIKLHTEAAGSYAITEPIT-RES---VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENT 76 (277)
T ss_dssp CCCCHHHHHHHSSSCCCSCCS-TTT---TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCC
T ss_pred CChHHHHHHhCCCHHHHHHHH-hcC---CCcCCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCe
Confidence 589997776554444444444 133 2323345799999999999999999887531 168999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHH
Q 044420 84 AFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHD 163 (545)
Q Consensus 84 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~ 163 (545)
|||+|+..|+.++|++|+++|+++ +.+|.+|.|||++|+..++.++++++...+...
T Consensus 77 pLh~A~~~g~~~iv~~Ll~~Gad~-n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~---------------------- 133 (277)
T d2fo1e1 77 PLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLK---------------------- 133 (277)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH----------------------
T ss_pred eecccccccccccccccccccccc-ccccccccccccchhhhcchhhhhhhhhccccc----------------------
Confidence 999999999999999999999997 899999999999999999999999988664310
Q ss_pred HHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCC---chhhhhhccCCCh
Q 044420 164 LALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRD---DSEFTDLIRKPSH 240 (545)
Q Consensus 164 ~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~g~t 240 (545)
..++..+..+.++.+.+...+..+ ....+..+.+...... .......+..|.|
T Consensus 134 ----------~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 189 (277)
T d2fo1e1 134 ----------GDIEELDRNGMTALMIVAHNEGRD--------------QVASAKLLVEKGAKVDYDGAARKDSEKYKGRT 189 (277)
T ss_dssp ----------HTTSCCCTTSCCHHHHHHHSCSTT--------------HHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCC
T ss_pred ----------ccccccccccchhHHHHHhccccc--------------ccccccccccccccccccccccccccccCCCC
Confidence 112344556666666666555432 1222222222221111 1223345577999
Q ss_pred HHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHHHHHHHhhccchhhhhhcccCCCCChhhhhccCC
Q 044420 241 LLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANIFNLIYEIGFTKELMATFKDHDQNNMLHLAAKSP 320 (545)
Q Consensus 241 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~n~~d~~G~TpLh~A~~~~ 320 (545)
|||.++..++.+++++++.......+.+|..|+||||+|+..|+.+++++|+++|++ +|.+|.+|+||||+|++.|
T Consensus 190 ~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gad----in~~d~~G~T~L~~A~~~~ 265 (277)
T d2fo1e1 190 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS----VEAVDATDHTARQLAQANN 265 (277)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----SSCCCSSSCCHHHHHHHTT
T ss_pred ccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC----CCCcCCCCCCHHHHHHHcC
Confidence 999999999999999887766555889999999999999999999999999999999 7889999999999999999
Q ss_pred CCCcccccc
Q 044420 321 HPSRVSIVS 329 (545)
Q Consensus 321 ~~~~~~~L~ 329 (545)
+.+++++|.
T Consensus 266 ~~~iv~lL~ 274 (277)
T d2fo1e1 266 HHNIVDIFD 274 (277)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999998874
No 6
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=9.5e-36 Score=276.36 Aligned_cols=217 Identities=18% Similarity=0.196 Sum_probs=193.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHc
Q 044420 46 YETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVL 125 (545)
Q Consensus 46 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 125 (545)
+++.||.+|..|+.+.|+.+++. .+.+++.+|..|+||||+|+..|+.+++++|++.+.+. ...+..+.++++.|+..
T Consensus 3 ~~~~~~~~a~~G~~~~v~~~l~~-~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~ 80 (223)
T d1uoha_ 3 SNLMVCNLAYSGKLEELKESILA-DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASA 80 (223)
T ss_dssp SSSHHHHHHHTTCHHHHHHHHHH-CGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHhCCHHHHHHHHHh-CCCcCcCcCCCCCCHHHHHHHhhhhccccccccccccc-ccccccccccccccccc
Confidence 57899999999999999888875 78899999999999999999999999999999999886 67788899999999999
Q ss_pred CCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchh
Q 044420 126 AQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLL 205 (545)
Q Consensus 126 g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~ 205 (545)
++.+++++|++++++++ .
T Consensus 81 ~~~~i~~~Ll~~~~d~~-----------------------------------~--------------------------- 98 (223)
T d1uoha_ 81 GRDEIVKALLGKGAQVN-----------------------------------A--------------------------- 98 (223)
T ss_dssp TCHHHHHHHHHTTCCTT-----------------------------------C---------------------------
T ss_pred cccchhHHHhccCceeE-----------------------------------e---------------------------
Confidence 99999999999887521 1
Q ss_pred hHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCch
Q 044420 206 TRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHA 285 (545)
Q Consensus 206 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~ 285 (545)
.|.+|.||||+|+..|+.+++++|+++|.+ ++.+|.+|.||||+|+..++.
T Consensus 99 ----------------------------~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d-~~~~~~~~~t~L~~a~~~~~~ 149 (223)
T d1uoha_ 99 ----------------------------VNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYEATAMHRAAAKGNL 149 (223)
T ss_dssp ----------------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCH
T ss_pred ----------------------------eCCCCCchhhHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCccchhhhhcCCc
Confidence 225678888888899999999999999999 899999999999999999999
Q ss_pred HHHHHHHhhccchhhhhhcccCCCCChhhhhccCCCCCccccccchhHHhHHHHhHHHHHhhhhcCccccccCCCCCChh
Q 044420 286 NIFNLIYEIGFTKELMATFKDHDQNNMLHLAAKSPHPSRVSIVSGAALQMHRELLWFKEVEKIVQPTFREMKNSEGKTPR 365 (545)
Q Consensus 286 ~iv~~Ll~~g~~~~~~~n~~d~~G~TpLh~A~~~~~~~~~~~L~~~~~~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl 365 (545)
+++++|++.+.+ +|.+|.+|+||||+|++.|+.+++++|.+ .|++++.+|.+|+|||
T Consensus 150 ~~~~~L~~~~~~----i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~-------------------~Gad~~~~d~~g~tpl 206 (223)
T d1uoha_ 150 KMIHILLYYKAS----TNIQDTEGNTPLHLACDEERVEEAKLLVS-------------------QGASIYIENKEEKTPL 206 (223)
T ss_dssp HHHHHHHHTTCC----SCCCCTTCCCHHHHHHHTTCHHHHHHHHH-------------------TTCCSCCCCTTSCCHH
T ss_pred chhhhhccccce----eeeccCCCCceeccccccCcHHHHHHHHH-------------------CCCCCCCCCCCCCCHH
Confidence 999999999998 88899999999999999999998888742 3889999999999999
Q ss_pred hhhHhhhhhhhhh
Q 044420 366 ELFSIEHSSLLRS 378 (545)
Q Consensus 366 ~~a~~~~~~l~~~ 378 (545)
|+|...+.+++++
T Consensus 207 ~~A~~~~~~i~~~ 219 (223)
T d1uoha_ 207 QVAKGGLGLILKR 219 (223)
T ss_dssp HHCCTTHHHHHHH
T ss_pred HHHHCCCHHHHhc
Confidence 9997766665543
No 7
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=9.2e-35 Score=279.99 Aligned_cols=271 Identities=20% Similarity=0.177 Sum_probs=232.5
Q ss_pred ccCCHHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHH
Q 044420 7 LNICVPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFC 86 (545)
Q Consensus 7 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh 86 (545)
.++.|+||.|++.|+.++|++|++ .| .+++...+..|+||||+|+..|+.+++++|++ .+...+..+..+.+|.+
T Consensus 3 ~~~~~~L~~Ai~~~~~e~vk~Ll~--~G-~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~--~~~~~~~~~~~~~~~~~ 77 (285)
T d1wdya_ 3 VEDNHLLIKAVQNEDVDLVQQLLE--GG-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLR--HGADPVLRKKNGATPFL 77 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHH--TT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTCCCHHH
T ss_pred CCCcHHHHHHHHcCCHHHHHHHHH--CC-CCcCccCCCCCCCHHHHHHHcCCHHHhhhhcc--ccccccccccccchhhH
Confidence 467899999999999999999999 77 77775666789999999999999999999999 78899999999999999
Q ss_pred HHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccC----------CCCChhhHHHHH
Q 044420 87 FAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNL----------TPEDQNALFFTC 156 (545)
Q Consensus 87 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~----------~~~~~t~l~~aa 156 (545)
.|+..+..+.....++...+. ...+..|.|+++.|+..++...++.++....+++.. ...|.||||+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 156 (285)
T d1wdya_ 78 LAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 156 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHH
T ss_pred HHhhcCCccccchhhhhcccc-cccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHH
Confidence 999999999999999998775 678889999999999999999999999887664332 345788999988
Q ss_pred HhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhhcc
Q 044420 157 ISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIR 236 (545)
Q Consensus 157 ~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 236 (545)
..+ ..+.+..++.+.|.+++..+..|.++++.+...+.... .. .+++.+++.+ .+++.++.
T Consensus 157 ~~~-~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-------------~~----~i~~~Li~~g-a~~n~~~~ 217 (285)
T d1wdya_ 157 EKG-HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD-------------VE----AITHLLLDHG-ADVNVRGE 217 (285)
T ss_dssp HHT-CHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTT-------------HH----HHHHHHHHTT-CCSSCCCT
T ss_pred HcC-CHHHHHHHHhccCCCcccccCCCCcccccccccccchH-------------HH----HHHHHHHHCC-CCCCccCC
Confidence 775 45788888888899999999999999888776654321 22 3455555555 44566788
Q ss_pred CCChHHHHHHhcCcHHHHHHHHHH-CCCcccccccCCCcHHHHHHHhCchHHHHHHHhhccchhhhhhcccC
Q 044420 237 KPSHLLFDAAELGNFEFLAELICS-YPDLVHELDDNNRSIFHIAVLHRHANIFNLIYEIGFTKELMATFKDH 307 (545)
Q Consensus 237 ~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~n~~d~ 307 (545)
.|.||||.|++.|+.+++++|++. |.+ ++.+|.+|+||||+|+++|+.+++++|+++|++ +|++|.
T Consensus 218 ~g~t~L~~a~~~~~~~~v~~lL~~~g~d-in~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd----~n~~d~ 284 (285)
T d1wdya_ 218 RGKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGAS----TDCGDL 284 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSC----SCCSSC
T ss_pred CCCCccchhhhcCcHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCcccC
Confidence 999999999999999999999986 667 999999999999999999999999999999999 677763
No 8
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=100.00 E-value=7.2e-36 Score=288.95 Aligned_cols=243 Identities=17% Similarity=0.120 Sum_probs=198.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHH
Q 044420 44 KGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAA 123 (545)
Q Consensus 44 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~ 123 (545)
.++.||||.||+.|+.++|++|++ +|+++|.+|.+|.||||+|+..|+.++|++|+++|++. ...+..+.+||+.|+
T Consensus 38 ~~~~t~l~~A~~~G~~~~v~~Ll~--~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~-~~~~~~~~~~L~~a~ 114 (291)
T d1s70b_ 38 FDDGAVFLAACSSGDTEEVLRLLE--RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAA 114 (291)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHH--HCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCCchHHHHHHHcCCHHHHHHHHH--CCCCCCccCCCCCcHHHHHHhcCCceeeeeeccccccc-ccccccccccccccc
Confidence 345699999999999999999999 79999999999999999999999999999999999986 788889999999999
Q ss_pred HcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccc
Q 044420 124 VLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQG 203 (545)
Q Consensus 124 ~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~ 203 (545)
..++.++++.|+++|......+..+.+++++|+..+. .+.+..++...+.++......+..+.+...
T Consensus 115 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~------------ 181 (291)
T d1s70b_ 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM-EELLQNEVNRQGVDIEAARKEEERIMLRDA------------ 181 (291)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHH-HHHHHHHHHHHTCCHHHHHHHHHHHHHHHH------------
T ss_pred cccccchhhcccccCcccccccccCcccccccccccc-chhccccccccccccccccccccccccccc------------
Confidence 9999999999999998877788888888888765544 356666666655544333322222222211
Q ss_pred hhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhC
Q 044420 204 LLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHR 283 (545)
Q Consensus 204 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 283 (545)
...+.... .+....+..|.||||.|+..|+.++++.|++.|++ ++.+|.+|+||||+|+..|
T Consensus 182 ----------------~~~~~~~~-~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~d-in~~~~~g~TpL~~A~~~g 243 (291)
T d1s70b_ 182 ----------------RQWLNSGH-INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWG 243 (291)
T ss_dssp ----------------HHHHHHTC-CCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTT
T ss_pred ----------------hhhhcccc-cccccccCCCCChhhHHHHcCChhhhcccccceec-ccccccCCCCHHHHHHHcC
Confidence 11111111 22334557899999999999999999999999999 8999999999999999999
Q ss_pred chHHHHHHHhhccchhhhhhcccCCCCChhhhhccCCCCCccccc
Q 044420 284 HANIFNLIYEIGFTKELMATFKDHDQNNMLHLAAKSPHPSRVSIV 328 (545)
Q Consensus 284 ~~~iv~~Ll~~g~~~~~~~n~~d~~G~TpLh~A~~~~~~~~~~~L 328 (545)
+.++|++|+++|++ +|.+|++|+||||+|++ +++++|
T Consensus 244 ~~~iv~lLl~~Gad----v~~~d~~G~TaL~~A~e----~~~~~L 280 (291)
T d1s70b_ 244 KEEACRILVENLCD----MEAVNKVGQTAFDVADE----DILGYL 280 (291)
T ss_dssp CHHHHHHHHHTTCC----TTCCCTTSCCTTTSCCS----GGGHHH
T ss_pred CHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHH----HHHHHH
Confidence 99999999999999 78899999999999975 466555
No 9
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=2.3e-35 Score=279.67 Aligned_cols=231 Identities=17% Similarity=0.107 Sum_probs=175.2
Q ss_pred ccccCCCCcHHHHHHHhCCHHHHHHHHHcCcc--cccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccCCCCChhhH
Q 044420 75 TLQDRNGNTAFCFAVAAGSIHIAKIMLKKNER--LLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNLTPEDQNAL 152 (545)
Q Consensus 75 ~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~--~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l 152 (545)
+..|++|+||||+||+.|+.+++++|+++|++ ..+.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||+
T Consensus 3 ~~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL 82 (255)
T d1oy3d_ 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (255)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred ccCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhh
Confidence 34578999999999999999999999999865 2368899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHhCCCcccccCC----------CCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHH
Q 044420 153 FFTCISTDLHDLALKLLEDHSGLAVARDG----------NYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEA 222 (545)
Q Consensus 153 ~~aa~~~~~~~~~~~lL~~~~~~~~~~d~----------~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 222 (545)
|+|+..+.. +.+ +++.+.......... .+.+....+..... .........
T Consensus 83 ~~A~~~~~~-~~~-~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~ 142 (255)
T d1oy3d_ 83 HLACRVRAH-TCA-CVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQ------------------PNPENEEEP 142 (255)
T ss_dssp HHHTTTTCH-HHH-HHHSSSCCSSCCCC----------------------------------------------------
T ss_pred hhhhccCch-HHH-HHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhh------------------cchhHHHHH
Confidence 999877653 444 444443322111100 00011011000000 000001111
Q ss_pred HhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHHHHHHHhhccchhhhh
Q 044420 223 ILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANIFNLIYEIGFTKELMA 302 (545)
Q Consensus 223 l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~ 302 (545)
.........+.++.+|.||||+|++.|+.+++++|++.+++.....+..|.||||+|++.++.+++++|+++|++ +
T Consensus 143 ~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gad----i 218 (255)
T d1oy3d_ 143 RDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD----P 218 (255)
T ss_dssp -CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----T
T ss_pred HhhhcCcccccccccCcccccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCC----C
Confidence 112222556678899999999999999999999999999996556788999999999999999999999999998 7
Q ss_pred hcccCCCCChhhhhccCCCCCcccccc
Q 044420 303 TFKDHDQNNMLHLAAKSPHPSRVSIVS 329 (545)
Q Consensus 303 n~~d~~G~TpLh~A~~~~~~~~~~~L~ 329 (545)
|.+|++|+||||+|+..++.+++++|.
T Consensus 219 n~~d~~g~t~L~~A~~~~~~~i~~~Ll 245 (255)
T d1oy3d_ 219 TARMYGGRTPLGSALLRPNPILARLLR 245 (255)
T ss_dssp TCCCTTSCCHHHHHHTSSCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 889999999999999999999998884
No 10
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.5e-34 Score=269.35 Aligned_cols=126 Identities=21% Similarity=0.305 Sum_probs=83.1
Q ss_pred CHHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc---cccCCCCcHHH
Q 044420 10 CVPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLT---LQDRNGNTAFC 86 (545)
Q Consensus 10 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~---~~d~~g~TpLh 86 (545)
++|||+||+.|+.+.|+.|++ ..+ ..++ .+|.+|+||||+|+..|+.+++++|++ +|++++ ..|..|.||+|
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll~-~~~-~~~~-~~d~~G~TpL~~A~~~g~~~iv~~Ll~--~ga~~~~~~~~~~~~~~~~~ 75 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELLH-SKP-SLLL-QKDQDGRIPLHWSVSFQAHEITSFLLS--KMENVNLDDYPDDSGWTPFH 75 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH-HCG-GGTT-CCCTTSCCHHHHHHHTTCHHHHHHHHT--TCTTCCGGGCCCTTSCCHHH
T ss_pred CHhHHHHHHcCCHHHHHHHHH-cCC-Cccc-ccCCCCCCHHHHHHHcCCccccchhhh--hhcccccccccccccccccc
Confidence 367777777777777777776 344 4443 666777777777777777777777776 566654 34455667777
Q ss_pred HHHHhCCHHHHHHHHHcCccc-ccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccC
Q 044420 87 FAVAAGSIHIAKIMLKKNERL-LTMRGGENMTPLYMAAVLAQRDMALYLYDDAKA 140 (545)
Q Consensus 87 ~A~~~g~~~iv~~Ll~~~~~~-~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~ 140 (545)
+++..+..++++.++..+... ....+..+.||++.++..++.+++++|++.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 130 (229)
T d1ixva_ 76 IACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS 130 (229)
T ss_dssp HHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccc
Confidence 777777777777777666532 134556667777777777777777777666654
No 11
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=5.5e-34 Score=265.44 Aligned_cols=219 Identities=19% Similarity=0.175 Sum_probs=177.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCccc--ccCCCCCCCcHHHHHHH
Q 044420 47 ETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERL--LTMRGGENMTPLYMAAV 124 (545)
Q Consensus 47 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~--~~~~~~~g~tpL~~A~~ 124 (545)
+||||+||+.|+.++++.|++. .+.+++.+|.+|+||||+|+..|+.+++++|+++|+++ ....+..|.+|+|+|+.
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 79 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELLHS-KPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 79 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHH-CGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CHhHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCCHHHHHHHcCCccccchhhhhhcccccccccccccccccccccc
Confidence 5899999999999999999986 68899999999999999999999999999999999875 24678889999999999
Q ss_pred cCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccch
Q 044420 125 LAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGL 204 (545)
Q Consensus 125 ~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~ 204 (545)
.+..++++.++..+... .....+..+.||++.++..++.
T Consensus 80 ~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~l~~~~~~~~~-------- 118 (229)
T d1ixva_ 80 VGNLEVVKSLYDRPLKP---------------------------------DLNKITNQGVTCLHLAVGKKWF-------- 118 (229)
T ss_dssp HTCHHHHHHHHSSSSCC---------------------------------CTTCCCTTSCCHHHHHHHTTCH--------
T ss_pred ccccccccccccccccc---------------------------------cccccccccccccccccccchh--------
Confidence 99999999999887642 1234556667777777776643
Q ss_pred hhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCc
Q 044420 205 LTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRH 284 (545)
Q Consensus 205 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~ 284 (545)
+++ +.++..+ ......+..|+||||+|+..|+.+++++|++.+++.++.+|.+|+||||+|+.+|+
T Consensus 119 ---------~~~----~~l~~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~ 184 (229)
T d1ixva_ 119 ---------EVS----QFLIENG-ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH 184 (229)
T ss_dssp ---------HHH----HHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTC
T ss_pred ---------hhh----hhhhhhc-ccccccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhccccc
Confidence 222 3333333 23344567788999999999999999999998876688899999999999999999
Q ss_pred hHHHHHHHh-hccchhhhhhcccCCCCChhhhhccCCCCCccccc
Q 044420 285 ANIFNLIYE-IGFTKELMATFKDHDQNNMLHLAAKSPHPSRVSIV 328 (545)
Q Consensus 285 ~~iv~~Ll~-~g~~~~~~~n~~d~~G~TpLh~A~~~~~~~~~~~L 328 (545)
.+++++|++ .|++ ++.+|.+|+||||+|+.. +++++|
T Consensus 185 ~~~v~~Ll~~~gad----~~~~d~~g~t~l~~A~~~---~~~~~L 222 (229)
T d1ixva_ 185 GDAAVLLVEKYGAE----YDLVDNKGAKAEDVALNE---QVKKFF 222 (229)
T ss_dssp HHHHHHHHHHHCCC----SCCCCTTSCCTGGGCSCH---HHHHHH
T ss_pred HHHHHHHHHhcCCC----CCCcCCCCCCHHHHHhhH---HHHHHH
Confidence 999999986 4888 778999999999998854 455554
No 12
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=6.6e-34 Score=273.93 Aligned_cols=265 Identities=15% Similarity=0.132 Sum_probs=222.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCccccccc-CCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHH
Q 044420 45 GYETLLHLAAGARQTGFVEELLKLMKPEDLTLQD-RNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAA 123 (545)
Q Consensus 45 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d-~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~ 123 (545)
+++|+||.|++.|+.++|++|++ +|+++|.++ ..|.||||+|+..|+.+++++|++.+... ...+..+.+|.+.|+
T Consensus 4 ~~~~~L~~Ai~~~~~e~vk~Ll~--~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~-~~~~~~~~~~~~~~~ 80 (285)
T d1wdya_ 4 EDNHLLIKAVQNEDVDLVQQLLE--GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAA 80 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred CCcHHHHHHHHcCCHHHHHHHHH--CCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccc-cccccccchhhHHHh
Confidence 36799999999999999999999 899999776 46999999999999999999999999986 788889999999999
Q ss_pred HcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcc----------cccCCCCchHHHHHHhC
Q 044420 124 VLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLA----------VARDGNYETALHVLARK 193 (545)
Q Consensus 124 ~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~----------~~~d~~g~tpLh~A~~~ 193 (545)
..+..+...+.++...+....+..+.++++.++..+.. ..+...+... .+. ...+..|.||||+|++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T d1wdya_ 81 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV-KALKFLYKRG-ANVNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCH-HHHHHHHHTT-CCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred hcCCccccchhhhhcccccccccCCCchhHHHHHhcch-hhhhhhhhhc-ccccccccchhhhhhhcccCchHHHHHHHc
Confidence 99999999999999887677788889999999887654 3444444332 222 24467799999999999
Q ss_pred CCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhc----CcHHHHHHHHHHCCCcccccc
Q 044420 194 PSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAEL----GNFEFLAELICSYPDLVHELD 269 (545)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~----g~~~~v~~Ll~~~~~~~~~~d 269 (545)
|+. ++ ++.+++....+++..+..|.++++.+... +..+++++|+++|++ ++.+|
T Consensus 159 ~~~-----------------~~----~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~-~n~~~ 216 (285)
T d1wdya_ 159 GHV-----------------EV----LKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRG 216 (285)
T ss_dssp TCH-----------------HH----HHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-SSCCC
T ss_pred CCH-----------------HH----HHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCC-CCccC
Confidence 965 33 44555444466777788888888776543 456799999999999 89999
Q ss_pred cCCCcHHHHHHHhCchHHHHHHHhh-ccchhhhhhcccCCCCChhhhhccCCCCCccccccchhHHhHHHHhHHHHHhhh
Q 044420 270 DNNRSIFHIAVLHRHANIFNLIYEI-GFTKELMATFKDHDQNNMLHLAAKSPHPSRVSIVSGAALQMHRELLWFKEVEKI 348 (545)
Q Consensus 270 ~~G~t~Lh~A~~~~~~~iv~~Ll~~-g~~~~~~~n~~d~~G~TpLh~A~~~~~~~~~~~L~~~~~~~~~~l~~~~~v~~l 348 (545)
..|.||||+|+..|+.+++++|++. |.+ +|.+|.+|+||||+|+++|+.+++++|.+.
T Consensus 217 ~~g~t~L~~a~~~~~~~~v~~lL~~~g~d----in~~d~~G~TpL~~A~~~~~~eiv~~Ll~~----------------- 275 (285)
T d1wdya_ 217 ERGKTPLILAVEKKHLGLVQRLLEQEHIE----INDTDSDGKTALLLAVELKLKKIAELLCKR----------------- 275 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHSSSCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-----------------
T ss_pred CCCCCccchhhhcCcHHHHHHHHHcCCCC----CcCCCCCCCCHHHHHHHcCCHHHHHHHHHC-----------------
Confidence 9999999999999999999999985 777 889999999999999999999999888533
Q ss_pred hcCccccccCC
Q 044420 349 VQPTFREMKNS 359 (545)
Q Consensus 349 ~~~~~~~~~n~ 359 (545)
|+++|.+|.
T Consensus 276 --GAd~n~~d~ 284 (285)
T d1wdya_ 276 --GASTDCGDL 284 (285)
T ss_dssp --SSCSCCSSC
T ss_pred --CCCCCcccC
Confidence 888898874
No 13
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.7e-32 Score=253.25 Aligned_cols=224 Identities=17% Similarity=0.107 Sum_probs=180.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHc--CCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHH
Q 044420 45 GYETLLHLAAGARQTGFVEELLKL--MKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMA 122 (545)
Q Consensus 45 ~g~T~Lh~A~~~g~~~~v~~Ll~~--~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 122 (545)
+|+||||+||+.|+.++++.|++. ..|++++.+|.+|+||||+|+..|+.++++.|+++|++. +..+..|.++++.|
T Consensus 2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~~~~~~a 80 (228)
T d1k1aa_ 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLA 80 (228)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccccccccccc-cccccccccccccc
Confidence 699999999999999999988752 168899999999999999999999999999999999986 78889999999999
Q ss_pred HHcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCcccccc
Q 044420 123 AVLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQ 202 (545)
Q Consensus 123 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~ 202 (545)
...++.++++.+........ ...+.....+.++|+.+.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~l~~~~~~~~~~----- 124 (228)
T d1k1aa_ 81 CEHRSPTCLRALLDSAAPGT-------------------------------LDLEARNYDGLTALHVAVNTECQE----- 124 (228)
T ss_dssp HHTTCHHHHHHHHHHSCTTS-------------------------------CCTTCCCTTSCCHHHHHHHHTCHH-----
T ss_pred cccccccchhhhhhcccccc-------------------------------ccccccccccccccccccccccch-----
Confidence 99999999888876654311 112234455566776666544321
Q ss_pred chhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHh
Q 044420 203 GLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLH 282 (545)
Q Consensus 203 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 282 (545)
..+.+..............|.+||+.|+..+..++++.+++.+.+ .+.+|..|+||||+|+.+
T Consensus 125 ----------------~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~L~~A~~~ 187 (228)
T d1k1aa_ 125 ----------------TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGR 187 (228)
T ss_dssp ----------------HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHH
T ss_pred ----------------hhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccc-cccccccCcchHHHHHHc
Confidence 122222222222333456789999999999999999999999998 889999999999999999
Q ss_pred CchHHHHHHHhhccchhhhhhcccCCCCChhhhhccCCCCCccc
Q 044420 283 RHANIFNLIYEIGFTKELMATFKDHDQNNMLHLAAKSPHPSRVS 326 (545)
Q Consensus 283 ~~~~iv~~Ll~~g~~~~~~~n~~d~~G~TpLh~A~~~~~~~~~~ 326 (545)
|+.+++++|+++|++ +|.+|.+|+||||+|+++|+.++++
T Consensus 188 g~~~~v~~Ll~~Gad----~n~~d~~G~TpL~~A~~~~~~divk 227 (228)
T d1k1aa_ 188 GLLPLVRTLVRSGAD----SSLKNCHNDTPLMVARSRRVIDILR 227 (228)
T ss_dssp TCHHHHHHHHHTTCC----TTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred CCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHhCCCccccC
Confidence 999999999999999 7889999999999999998776653
No 14
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=100.00 E-value=1.4e-33 Score=272.73 Aligned_cols=248 Identities=18% Similarity=0.140 Sum_probs=205.2
Q ss_pred cccCCHHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHH
Q 044420 6 YLNICVPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAF 85 (545)
Q Consensus 6 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpL 85 (545)
..++.|+|+.||..|+.++|++||+ .| .+++ ..|.+|.||||+|+..|+.++|++|++ ++.+.+..+..+.|||
T Consensus 37 ~~~~~t~l~~A~~~G~~~~v~~Ll~--~G-advn-~~d~~G~T~L~~A~~~g~~eiv~~Ll~--~~~~~~~~~~~~~~~L 110 (291)
T d1s70b_ 37 KFDDGAVFLAACSSGDTEEVLRLLE--RG-ADIN-YANVDGLTALHQACIDDNVDMVKFLVE--NGANINQPDNEGWIPL 110 (291)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHH--HC-CCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHH
T ss_pred CCCCchHHHHHHHcCCHHHHHHHHH--CC-CCCC-ccCCCCCcHHHHHHhcCCceeeeeecc--cccccccccccccccc
Confidence 4556799999999999999999999 67 7776 789999999999999999999999999 7999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccC-CccCCCCChhhHHHHHHhcCcHHH
Q 044420 86 CFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKA-KDNLTPEDQNALFFTCISTDLHDL 164 (545)
Q Consensus 86 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~-~~~~~~~~~t~l~~aa~~~~~~~~ 164 (545)
|.|+..|+.++++.|+++|+.. +..|.+|.+|+++|+..++.+.++.++..... ..........+. ...
T Consensus 111 ~~a~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~---------~~~ 180 (291)
T d1s70b_ 111 HAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIM---------LRD 180 (291)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHH---------HHH
T ss_pred cccccccccchhhcccccCccc-ccccccCccccccccccccchhccccccccccccccccccccccc---------ccc
Confidence 9999999999999999999986 78999999999999999999999999965432 111010000111 122
Q ss_pred HHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHH
Q 044420 165 ALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFD 244 (545)
Q Consensus 165 ~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~ 244 (545)
....+.....+....+..|.||||.|+..|+. + +++.+++.+ .+++.++.+|.||||+
T Consensus 181 ~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~-----------------~----~~~~Ll~~g-~din~~~~~g~TpL~~ 238 (291)
T d1s70b_ 181 ARQWLNSGHINDVRHAKSGGTALHVAAAKGYT-----------------E----VLKLLIQAR-YDVNIKDYDGWTPLHA 238 (291)
T ss_dssp HHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCH-----------------H----HHHHHHTTT-CCTTCCCTTCCCHHHH
T ss_pred chhhhcccccccccccCCCCChhhHHHHcCCh-----------------h----hhcccccce-ecccccccCCCCHHHH
Confidence 33444555566677889999999999999965 2 355566665 5567788999999999
Q ss_pred HHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHHHHHHHhhcc
Q 044420 245 AAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANIFNLIYEIGF 296 (545)
Q Consensus 245 A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~ 296 (545)
|++.|+.++|++|+++|++ ++.+|.+|+||||+|++ +++++|.+...
T Consensus 239 A~~~g~~~iv~lLl~~Gad-v~~~d~~G~TaL~~A~e----~~~~~L~~~~~ 285 (291)
T d1s70b_ 239 AAHWGKEEACRILVENLCD-MEAVNKVGQTAFDVADE----DILGYLEELQK 285 (291)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTTTSCCS----GGGHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHH----HHHHHHHHHhh
Confidence 9999999999999999999 89999999999999975 67777776544
No 15
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=9.6e-33 Score=264.57 Aligned_cols=236 Identities=20% Similarity=0.155 Sum_probs=189.7
Q ss_pred cccCCHHhHHHHHcCChHHHHHhhcC------CCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccC
Q 044420 6 YLNICVPLQKAALKGNWPTAKHLLGN------EDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDR 79 (545)
Q Consensus 6 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~------~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~ 79 (545)
..+|+||||+||..|+.++|+.|+.. ..| ++++ .+|.+|+||||+|++.|+.++|++|++ +|++++.+|.
T Consensus 30 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~G-advn-~~d~~G~TpLh~A~~~g~~~iv~~Ll~--~Gad~n~~~~ 105 (277)
T d2fo1e1 30 PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAG-ADVN-AMDCDENTPLMLAVLARRRRLVAYLMK--AGADPTIYNK 105 (277)
T ss_dssp CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTC-CCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCCSCCCCT
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcC-CCcc-ccCCCCCeeeccccccccccccccccc--cccccccccc
Confidence 34699999999999999999988651 134 5565 789999999999999999999999999 8999999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCcc--cccCCCCCCCcHHHHHHHcCCHH---HHHHHHHcccCCccCCCCChhhHHH
Q 044420 80 NGNTAFCFAVAAGSIHIAKIMLKKNER--LLTMRGGENMTPLYMAAVLAQRD---MALYLYDDAKAKDNLTPEDQNALFF 154 (545)
Q Consensus 80 ~g~TpLh~A~~~g~~~iv~~Ll~~~~~--~~~~~~~~g~tpL~~A~~~g~~~---iv~~Ll~~~~~~~~~~~~~~t~l~~ 154 (545)
+|.||||+|+..++.++++.+...+.. ..+..+..+.++.+.+...+..+ .+..+.+.......
T Consensus 106 ~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 174 (277)
T d2fo1e1 106 SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDY----------- 174 (277)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSC-----------
T ss_pred cccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccc-----------
Confidence 999999999999999999999876532 22567888999999999877654 33333333321000
Q ss_pred HHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhh
Q 044420 155 TCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDL 234 (545)
Q Consensus 155 aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 234 (545)
......+..+..|.||||.++..++.+ . .+.++.....+...+
T Consensus 175 ----------------~~~~~~~~~~~~g~t~L~~~~~~~~~~-----------------~----~~~~l~~~~~~~~~~ 217 (277)
T d2fo1e1 175 ----------------DGAARKDSEKYKGRTALHYAAQVSNMP-----------------I----VKYLVGEKGSNKDKQ 217 (277)
T ss_dssp ----------------CSGGGTSSSSCCCCCTHHHHHSSCCHH-----------------H----HHHHHHHSCCCTTCC
T ss_pred ----------------cccccccccccCCCCcccccccccccc-----------------c----ccccccccccccccc
Confidence 011223567888999999999998653 2 233333333556677
Q ss_pred ccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHHHHHHHhh
Q 044420 235 IRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANIFNLIYEI 294 (545)
Q Consensus 235 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~ 294 (545)
|..|.||||+|++.|+.+++++|+++|++ ++.+|.+|+||||+|+++|+.+++++|++.
T Consensus 218 d~~g~tpL~~A~~~g~~~iv~~Ll~~gad-in~~d~~G~T~L~~A~~~~~~~iv~lL~~c 276 (277)
T d2fo1e1 218 DEDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDRC 276 (277)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 89999999999999999999999999999 999999999999999999999999999864
No 16
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=1.6e-32 Score=254.16 Aligned_cols=194 Identities=17% Similarity=0.133 Sum_probs=159.3
Q ss_pred CCCcHHHHHHHcCCHHH----HHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHH
Q 044420 45 GYETLLHLAAGARQTGF----VEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLY 120 (545)
Q Consensus 45 ~g~T~Lh~A~~~g~~~~----v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~ 120 (545)
+|+||||+|+..|+.++ ++.+.. .++++|.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~--~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~-~~~d~~g~t~l~ 77 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKG--DLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLH 77 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHh--CCCCcccCCCCCCccccccccccccccccccccccccc-cccccccccccc
Confidence 58999999999998654 445555 68899999999999999999999999999999999997 889999999999
Q ss_pred HHHHcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCcccc
Q 044420 121 MAAVLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASR 200 (545)
Q Consensus 121 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~ 200 (545)
.|+..|+.++++.|++.+.+....
T Consensus 78 ~~~~~~~~~~~~~l~~~~~~~~~~-------------------------------------------------------- 101 (221)
T d1iknd_ 78 LACEQGCLASVGVLTQSCTTPHLH-------------------------------------------------------- 101 (221)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSS--------------------------------------------------------
T ss_pred cccccccccccchhhhhccccccc--------------------------------------------------------
Confidence 999999999999999887641100
Q ss_pred ccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHH
Q 044420 201 NQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAV 280 (545)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~ 280 (545)
.........|.||||.|+..|+.++++++++.+++.....+.+|+||||+|+
T Consensus 102 ----------------------------~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~ 153 (221)
T d1iknd_ 102 ----------------------------SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAV 153 (221)
T ss_dssp ----------------------------CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHH
T ss_pred ----------------------------ccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCcccccc
Confidence 0011122557889999999999999999999998843444567999999999
Q ss_pred HhCchHHHHHHHhhccchhhhhhcccCCCCChhhhhccCCCCCcccccc
Q 044420 281 LHRHANIFNLIYEIGFTKELMATFKDHDQNNMLHLAAKSPHPSRVSIVS 329 (545)
Q Consensus 281 ~~~~~~iv~~Ll~~g~~~~~~~n~~d~~G~TpLh~A~~~~~~~~~~~L~ 329 (545)
+.|+.+++++|+++|++ +|.+|.+|+||||+|++.++.++++.|.
T Consensus 154 ~~g~~~~v~~Ll~~gad----~~~~~~~G~tpl~~A~~~~~~~~~~~l~ 198 (221)
T d1iknd_ 154 DLQNPDLVSLLLKCGAD----VNRVTYQGYSPYQLTWGRPSTRIQQQLG 198 (221)
T ss_dssp HTTCHHHHHHHHTTTCC----SCCCCTTCCCGGGGCTTSSCHHHHHHHH
T ss_pred ccccHHHHHHHHhcCCc----ccccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 99999999999999998 7889999999999999999888887764
No 17
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=2.3e-31 Score=246.21 Aligned_cols=196 Identities=18% Similarity=0.130 Sum_probs=171.0
Q ss_pred cCCHHhHHHHHcCChHHHHHhhcC--CCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHH
Q 044420 8 NICVPLQKAALKGNWPTAKHLLGN--EDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAF 85 (545)
Q Consensus 8 ~~~t~L~~Aa~~g~~~~v~~Ll~~--~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpL 85 (545)
+|+||||+|+..|+.++++.+++. .++ .+++ ..|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.|||
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~-~~in-~~d~~g~TpLh~A~~~~~~~iv~~L~~--~g~d~~~~d~~g~t~l 76 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDL-AFLN-FQNNLQQTPLHLAVITNQPEIAEALLG--AGCDPELRDFRGNTPL 76 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----C-CCCC-CCCTTCCCHHHHHHHTTCHHHHHCCCS--CCCCSCCCCTTCCCHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCC-CCcc-cCCCCCCcccccccccccccccccccc--cccccccccccccccc
Confidence 699999999999998888777761 134 4555 789999999999999999999999999 8999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHcCcc-----cccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcC
Q 044420 86 CFAVAAGSIHIAKIMLKKNER-----LLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTD 160 (545)
Q Consensus 86 h~A~~~g~~~iv~~Ll~~~~~-----~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~ 160 (545)
|+|+..|+.++++.|++.+.. .......+|.||||.|+..++.+++++|++.|+.++..
T Consensus 77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~---------------- 140 (221)
T d1iknd_ 77 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ---------------- 140 (221)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCC----------------
T ss_pred ccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccc----------------
Confidence 999999999999999997643 23456677999999999999999999999988752111
Q ss_pred cHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCCh
Q 044420 161 LHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSH 240 (545)
Q Consensus 161 ~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~t 240 (545)
.+.+|.|
T Consensus 141 -------------------------------------------------------------------------~~~~G~T 147 (221)
T d1iknd_ 141 -------------------------------------------------------------------------EPCNGRT 147 (221)
T ss_dssp -------------------------------------------------------------------------CTTTCCC
T ss_pred -------------------------------------------------------------------------cccCCCC
Confidence 1145789
Q ss_pred HHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHHHHHHHhhccc
Q 044420 241 LLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANIFNLIYEIGFT 297 (545)
Q Consensus 241 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~ 297 (545)
|||+|++.|+.+++++|+++|+| ++.+|.+|+||||+|+..++.+++++|++.+.+
T Consensus 148 ~L~~A~~~g~~~~v~~Ll~~gad-~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~ 203 (221)
T d1iknd_ 148 ALHLAVDLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203 (221)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred ccccccccccHHHHHHHHhcCCc-ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence 99999999999999999999999 999999999999999999999999999998765
No 18
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.97 E-value=5e-30 Score=234.79 Aligned_cols=206 Identities=17% Similarity=0.165 Sum_probs=130.1
Q ss_pred HHHHHHHHHcCCCccccc-ccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 044420 59 TGFVEELLKLMKPEDLTL-QDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDD 137 (545)
Q Consensus 59 ~~~v~~Ll~~~~~~~~~~-~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~ 137 (545)
.|+|++|++ +|++++. .|.+|+||||+||..|+.+++++|++.|+++ +.++..+.+|++.++..++.+........
T Consensus 2 ~~~v~~Ll~--~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~-n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (209)
T d1ot8a_ 2 AQVISDLLA--QGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADA-NSQDNTGRTPLHAAVAADAMGVFQILLRN 78 (209)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred HHHHHHHHH--CCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccc-ccccccccccccccccccccccccccccc
Confidence 467777777 5777765 4677777777777777777777777777775 66777777777777777777666655554
Q ss_pred ccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHhHHHHHHHHH
Q 044420 138 AKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRLMHSALQLVK 217 (545)
Q Consensus 138 ~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (545)
........ ...|.++.+.+.......
T Consensus 79 ~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~-------------------- 104 (209)
T d1ot8a_ 79 RATNLNAR----------------------------------MHDGTTPLILAARLAIEG-------------------- 104 (209)
T ss_dssp TTCCTTCC----------------------------------CTTCCCHHHHHHHTTCTT--------------------
T ss_pred cccccccc----------------------------------cccccccccccccccchh--------------------
Confidence 44211111 112222222222222111
Q ss_pred HHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHHHHHHHhhccc
Q 044420 218 SLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANIFNLIYEIGFT 297 (545)
Q Consensus 218 ~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~ 297 (545)
..+.+...+ .++...+..|.|||+.++..|..++++.+++.+.+ ++.+|.+|.||||+|+.+|+.+++++|+++|++
T Consensus 105 -~~~~L~~~~-~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~-~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad 181 (209)
T d1ot8a_ 105 -MVEDLITAD-ADINAADNSGKTALHWAAAVNNTEAVNILLMHHAN-RDAQDDKDETPLFLAAREGSYEASKALLDNFAN 181 (209)
T ss_dssp -HHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -hhhhhhhhc-ccccccCCCCCCcchhhcccCcceeeeeecccccc-ccccccccccccchhccccHHHHHHHHHHCCCC
Confidence 011111111 22233345566677777777777777777777777 677777777888888877788888877777777
Q ss_pred hhhhhhcccCCCCChhhhhccCCCCCccccc
Q 044420 298 KELMATFKDHDQNNMLHLAAKSPHPSRVSIV 328 (545)
Q Consensus 298 ~~~~~n~~d~~G~TpLh~A~~~~~~~~~~~L 328 (545)
+|.+|.+|+||||+|++.|+.+++++|
T Consensus 182 ----~n~~d~~g~Tpl~~A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 182 ----REITDHMDRLPRDVASERLHHDIVRLL 208 (209)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ----CCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence 566777777888888877777777654
No 19
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=1.1e-29 Score=234.22 Aligned_cols=221 Identities=19% Similarity=0.169 Sum_probs=182.0
Q ss_pred cCCHHhHHHHHcCChHHHHHhhcC--CCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHH
Q 044420 8 NICVPLQKAALKGNWPTAKHLLGN--EDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAF 85 (545)
Q Consensus 8 ~~~t~L~~Aa~~g~~~~v~~Ll~~--~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpL 85 (545)
+|+||||+||+.|+.++++.|++. +.+ .+++ ..|.+|+||||+|+..|+.+++++|++ .+++.+..+..|.+++
T Consensus 2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g-~~in-~~d~~g~TpL~~A~~~~~~~iv~~Ll~--~ga~~~~~~~~~~~~~ 77 (228)
T d1k1aa_ 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGG-RELD-IYNNLRQTPLHLAVITTLPSVVRLLVT--AGASPMALDRHGQTAA 77 (228)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTT-CCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHCC-CCCC-ccCCCCCccceehhccccccccccccc--cccccccccccccccc
Confidence 699999999999999999999851 144 4554 788999999999999999999999999 8999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHcCcc---cccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcH
Q 044420 86 CFAVAAGSIHIAKIMLKKNER---LLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLH 162 (545)
Q Consensus 86 h~A~~~g~~~iv~~Ll~~~~~---~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~ 162 (545)
+.|...++.++++.+...... ..+.......+||+.+.........+.|.....+.
T Consensus 78 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~--------------------- 136 (228)
T d1k1aa_ 78 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADI--------------------- 136 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---------------------
T ss_pred ccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhcccccc---------------------
Confidence 999999999999988876432 22456677889999999999998888888766541
Q ss_pred HHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHH
Q 044420 163 DLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLL 242 (545)
Q Consensus 163 ~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpL 242 (545)
....+..|.+||+.|+..+.. .+ .+.+++.+ ......|..|.|||
T Consensus 137 -------------~~~~~~~~~~~l~~a~~~~~~-----------------~~----~~~~~~~~-~~~~~~d~~g~t~L 181 (228)
T d1k1aa_ 137 -------------DAVDIKSGRSPLIHAVENNSL-----------------SM----VQLLLQHG-ANVNAQMYSGSSAL 181 (228)
T ss_dssp -------------TCCCTTTCCCHHHHHHHTTCH-----------------HH----HHHHHHTT-CCTTCBCTTSCBHH
T ss_pred -------------ccccccchhhHHHHHHHhhhh-----------------hh----hhhhhhhc-cccccccccCcchH
Confidence 123455677778887777643 22 33333343 44556678899999
Q ss_pred HHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHHHH
Q 044420 243 FDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANIFN 289 (545)
Q Consensus 243 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~ 289 (545)
|+|+..|+.+++++|+++|+| ++.+|.+|+||||+|+++|+.|+||
T Consensus 182 ~~A~~~g~~~~v~~Ll~~Gad-~n~~d~~G~TpL~~A~~~~~~divk 227 (228)
T d1k1aa_ 182 HSASGRGLLPLVRTLVRSGAD-SSLKNCHNDTPLMVARSRRVIDILR 227 (228)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHhCCCccccC
Confidence 999999999999999999999 9999999999999999999999885
No 20
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.96 E-value=1.2e-30 Score=257.64 Aligned_cols=235 Identities=11% Similarity=0.020 Sum_probs=159.5
Q ss_pred cccCCHHhHHHHHcCChHHHHH---hhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccc--CC
Q 044420 6 YLNICVPLQKAALKGNWPTAKH---LLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQD--RN 80 (545)
Q Consensus 6 ~~~~~t~L~~Aa~~g~~~~v~~---Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d--~~ 80 (545)
+.+|.||||+||++|+.+++++ |++ .+ .+++ .+|.+|+||||+||++||.++|++|++ .|++++..+ .+
T Consensus 87 ~~~~~t~L~~Aa~~g~~~~~~~~~~L~~--~~-~~in-~~~~~g~taL~~Aa~~G~~~~v~~Ll~--~g~~~~~~~~~~~ 160 (346)
T d2ajaa1 87 GIKSEVICFVAAITGCSSALDTLCLLLT--SD-EIVK-VIQAENYQAFRLAAENGHLHVLNRLCE--LAPTEIMAMIQAE 160 (346)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC----CC-SSCC---CHHHHHHHHHHHHTTCHHHHHHHHH--SCTTTHHHHHSHH
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHHHHh--CC-Cccc-ccCCCCCCHHHHHHHCCCHHHHHHHHH--cCCCccccccccC
Confidence 3468899999999999877765 455 55 5555 678889999999999999999999998 788888766 45
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCcccc--cCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccC-------CCCChhh
Q 044420 81 GNTAFCFAVAAGSIHIAKIMLKKNERLL--TMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNL-------TPEDQNA 151 (545)
Q Consensus 81 g~TpLh~A~~~g~~~iv~~Ll~~~~~~~--~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~-------~~~~~t~ 151 (545)
|+||||+|+.+||.++|++|++.|++.. +..+.+|.||+|.|+++|+.+++++|+++|++++.. ...+.++
T Consensus 161 g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 240 (346)
T d2ajaa1 161 NYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNP 240 (346)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHH
T ss_pred CCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhH
Confidence 8899999999999999999999887532 344556778888888999999999999888763221 1111222
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhh
Q 044420 152 LFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEF 231 (545)
Q Consensus 152 l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 231 (545)
++.++... ...+.++++.+...+..+.. ....
T Consensus 241 ~~~~~~~~--------------------~~~~~~~l~~a~~~~~~~~~----------------------------~~~~ 272 (346)
T d2ajaa1 241 FIARHVNR--------------------LKEMHDAFKLSNPDGVFDLV----------------------------TKSE 272 (346)
T ss_dssp HHHHHHHH--------------------HHHHHTTTTTTSSSSCCCCS----------------------------SHHH
T ss_pred HHHHhhcc--------------------chHHHHHHHHhcccccHhHH----------------------------hccc
Confidence 22222110 00112233333333322110 0011
Q ss_pred hhhccCCChHHHHHHhcCcHHHHHHHHHHCCCc----ccccccCCCcHHHHHHHhCchHHHHHHHhh
Q 044420 232 TDLIRKPSHLLFDAAELGNFEFLAELICSYPDL----VHELDDNNRSIFHIAVLHRHANIFNLIYEI 294 (545)
Q Consensus 232 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~----~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~ 294 (545)
......+.++++.|+..|+.+++++|++.+... .+..+.+|+||||+||+.|+.++|++|++.
T Consensus 273 ~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~ 339 (346)
T d2ajaa1 273 CLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339 (346)
T ss_dssp HHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred ccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCC
Confidence 111123468899999999999999999876541 233456789999999999999999999975
No 21
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=1.8e-27 Score=206.92 Aligned_cols=154 Identities=18% Similarity=0.129 Sum_probs=133.1
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCC
Q 044420 48 TLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQ 127 (545)
Q Consensus 48 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 127 (545)
+|||+||..|+.++|+.|++ +|++++.+|.+|.||||+|+ .|+.+++++|+++|+++ +.++.+|.+|++.++..++
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~--~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~-~~~~~~~~~~l~~~~~~~~ 78 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQ--NNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGF 78 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTT--SCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHcCCHHHHHHHHH--CCCCcCccCCcccccccccc-ccccccccccccccccc-ccccccCcccccccccccc
Confidence 78999999999999999999 79999999999999999876 78999999999999986 8889999999999999999
Q ss_pred HHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhH
Q 044420 128 RDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTR 207 (545)
Q Consensus 128 ~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~ 207 (545)
.+.++.|++.+.+++
T Consensus 79 ~~~~~~l~~~~~~~~----------------------------------------------------------------- 93 (156)
T d1ihba_ 79 LDTLQTLLEFQADVN----------------------------------------------------------------- 93 (156)
T ss_dssp HHHHHHHHHTTCCTT-----------------------------------------------------------------
T ss_pred ccccccccccccccc-----------------------------------------------------------------
Confidence 999999888765411
Q ss_pred hHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHH
Q 044420 208 LMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANI 287 (545)
Q Consensus 208 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~i 287 (545)
..+..|.+|||+|++.|+.+++++|+++++...+.+|.+|+||||+|+++++.++
T Consensus 94 -------------------------~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~i 148 (156)
T d1ihba_ 94 -------------------------IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEV 148 (156)
T ss_dssp -------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred -------------------------ccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHH
Confidence 1125567888888888889999999999885588899999999999999999999
Q ss_pred HHHHHhhc
Q 044420 288 FNLIYEIG 295 (545)
Q Consensus 288 v~~Ll~~g 295 (545)
+++|+++|
T Consensus 149 v~~Ll~~G 156 (156)
T d1ihba_ 149 VSLMQANG 156 (156)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99999876
No 22
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.95 E-value=7.8e-30 Score=251.84 Aligned_cols=239 Identities=15% Similarity=0.077 Sum_probs=166.2
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHH---HHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCC--CCC
Q 044420 41 GIAKGYETLLHLAAGARQTGFVEE---LLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRG--GEN 115 (545)
Q Consensus 41 ~~~~~g~T~Lh~A~~~g~~~~v~~---Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~--~~g 115 (545)
.++..|.||||+||++||.+++++ |++ .|++++.+|.+|.||||+||++||.++|++|+++|+++ +..+ .+|
T Consensus 85 ~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~--~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~-~~~~~~~~g 161 (346)
T d2ajaa1 85 KKGIKSEVICFVAAITGCSSALDTLCLLLT--SDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTE-IMAMIQAEN 161 (346)
T ss_dssp HHTCCHHHHHHHHHHHCCHHHHHHHTTC----CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTT-HHHHHSHHH
T ss_pred hccCCCCcHHHHHHHhCCHHHHHHHHHHHh--CCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc-cccccccCC
Confidence 567889999999999999887776 677 89999999999999999999999999999999999986 5544 569
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcccCCcc--CCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhC
Q 044420 116 MTPLYMAAVLAQRDMALYLYDDAKAKDN--LTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARK 193 (545)
Q Consensus 116 ~tpL~~A~~~g~~~iv~~Ll~~~~~~~~--~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~ 193 (545)
.||||+|+++|+.++|++|++.|++... .+..++++++++|...|+.+++ ++|.+.|++++ ++.+.+...
T Consensus 162 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv-~~Ll~~ga~~~-------~~~~~~~~~ 233 (346)
T d2ajaa1 162 YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVI-NFLLDCPVMLA-------YAEIHEFEY 233 (346)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHH-HHHTTSHHHHH-------HHHHCTTTT
T ss_pred CChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHH-HHHHhCCCCcc-------hHHHHHHHc
Confidence 9999999999999999999999986322 2234445555555555554443 44444444433 233333333
Q ss_pred CCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCc-cccc----
Q 044420 194 PSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDL-VHEL---- 268 (545)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~-~~~~---- 268 (545)
++ .+.++++.+...+..+....+....++. .+..
T Consensus 234 ~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 272 (346)
T d2ajaa1 234 GE-----------------------------------------KYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSE 272 (346)
T ss_dssp TT-----------------------------------------TTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHH
T ss_pred Cc-----------------------------------------HhhhHHHHHhhccchHHHHHHHHhcccccHhHHhccc
Confidence 32 2234444444444444433333322220 1111
Q ss_pred ---ccCCCcHHHHHHHhCchHHHHHHHhhccchhh-hhhcccCCCCChhhhhccCCCCCccccccch
Q 044420 269 ---DDNNRSIFHIAVLHRHANIFNLIYEIGFTKEL-MATFKDHDQNNMLHLAAKSPHPSRVSIVSGA 331 (545)
Q Consensus 269 ---d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~-~~n~~d~~G~TpLh~A~~~~~~~~~~~L~~~ 331 (545)
...+.++++.|+..++.+++++|++.+..... ..+..+.+|+||||+|++.|+.+++++|++.
T Consensus 273 ~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~ 339 (346)
T d2ajaa1 273 CLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339 (346)
T ss_dssp HHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred ccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCC
Confidence 12345789999999999999999998765332 1344567899999999999999999998653
No 23
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.94 E-value=4.9e-26 Score=207.88 Aligned_cols=207 Identities=28% Similarity=0.273 Sum_probs=173.3
Q ss_pred hHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHH
Q 044420 22 WPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIML 101 (545)
Q Consensus 22 ~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll 101 (545)
.|+|+.|++ +| .+++...|.+|+||||+||+.|+.+++++|++ .|++++.+|..+.++++.++..++.+......
T Consensus 2 ~~~v~~Ll~--~g-~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~--~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (209)
T d1ot8a_ 2 AQVISDLLA--QG-AELNATMDKTGETSLHLAARFARADAAKRLLD--AGADANSQDNTGRTPLHAAVAADAMGVFQILL 76 (209)
T ss_dssp HHHHHHHHH--HH-HHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHH--CC-CCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHh--hccccccccccccccccccccccccccccccc
Confidence 589999999 77 88875679999999999999999999999999 89999999999999999999999999888888
Q ss_pred HcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCC
Q 044420 102 KKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDG 181 (545)
Q Consensus 102 ~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~ 181 (545)
.............|.++.+.+.........+.|.+.+.+++. ++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-----------------------------------~~~ 121 (209)
T d1ot8a_ 77 RNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINA-----------------------------------ADN 121 (209)
T ss_dssp TCTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTC-----------------------------------BCT
T ss_pred cccccccccccccccccccccccccchhhhhhhhhhcccccc-----------------------------------cCC
Confidence 776665566777899999999999999999999999987443 455
Q ss_pred CCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHC
Q 044420 182 NYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSY 261 (545)
Q Consensus 182 ~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~ 261 (545)
.|.|||+.++..+.. + +++.+++.+ .+.+..|..|.||||+|+..|+.+++++|+++|
T Consensus 122 ~~~t~l~~~~~~~~~-----------------~----~~~~l~~~~-~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g 179 (209)
T d1ot8a_ 122 SGKTALHWAAAVNNT-----------------E----AVNILLMHH-ANRDAQDDKDETPLFLAAREGSYEASKALLDNF 179 (209)
T ss_dssp TSCBHHHHHHHTTCH-----------------H----HHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCcchhhcccCcc-----------------e----eeeeecccc-ccccccccccccccchhccccHHHHHHHHHHCC
Confidence 555666666655532 1 223333333 334455678899999999999999999999999
Q ss_pred CCcccccccCCCcHHHHHHHhCchHHHHHH
Q 044420 262 PDLVHELDDNNRSIFHIAVLHRHANIFNLI 291 (545)
Q Consensus 262 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~L 291 (545)
++ ++.+|..|+||||+|+++|+.++|++|
T Consensus 180 ad-~n~~d~~g~Tpl~~A~~~~~~~iv~lL 208 (209)
T d1ot8a_ 180 AN-REITDHMDRLPRDVASERLHHDIVRLL 208 (209)
T ss_dssp CC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CC-CCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence 99 899999999999999999999999986
No 24
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=2.9e-26 Score=199.24 Aligned_cols=121 Identities=20% Similarity=0.213 Sum_probs=114.7
Q ss_pred HHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHH
Q 044420 11 VPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVA 90 (545)
Q Consensus 11 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~ 90 (545)
+|||.||..|+.++|+.|++ ++ .+++ .+|.+|.||||+|+ .|+.+++++|++ ++++++.++..|.+|++.++.
T Consensus 3 ~~Lh~Aa~~g~~~~v~~Ll~--~g-~d~n-~~d~~g~TpL~~A~-~~~~ei~~~Ll~--~~a~~~~~~~~~~~~l~~~~~ 75 (156)
T d1ihba_ 3 NELASAAARGDLEQLTSLLQ--NN-VNVN-AQNGFGRTALQVMK-LGNPEIARRLLL--RGANPDLKDRTGFAVIHDAAR 75 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHTT--SC-CCTT-CCCTTSCCHHHHCC-SSCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHH--CC-CCcC-ccCCcccccccccc-cccccccccccc--cccccccccccCccccccccc
Confidence 79999999999999999999 67 7776 78999999999886 799999999999 899999999999999999999
Q ss_pred hCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHccc
Q 044420 91 AGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAK 139 (545)
Q Consensus 91 ~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~ 139 (545)
.++.+.++.|++.+.++ +..+..|.+|||+|+..++.+++++|+++++
T Consensus 76 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~ 123 (156)
T d1ihba_ 76 AGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 123 (156)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred ccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 99999999999999997 8899999999999999999999999999886
No 25
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=3.7e-26 Score=198.61 Aligned_cols=151 Identities=19% Similarity=0.152 Sum_probs=100.3
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCH
Q 044420 49 LLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQR 128 (545)
Q Consensus 49 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ 128 (545)
.||.||..|+.++|+.|++. .+++++.+|..|+||||+|+ .|+.+++++|++++.++ +..+..|.+|++.++..++.
T Consensus 5 ~L~~Aa~~g~~~~vk~lL~~-~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~-~~~~~~~~~~l~~~~~~~~~ 81 (156)
T d1bd8a_ 5 RLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFL 81 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHcCCHHHHHHHHHh-CCCCCCccCCCCCccccccc-ccccccccccccccccc-cccccccccccccccccccc
Confidence 47777777777777777764 46677777777777777665 36667777777777765 66666777777777777777
Q ss_pred HHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHh
Q 044420 129 DMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRL 208 (545)
Q Consensus 129 ~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~ 208 (545)
+++++++++|++++ .+
T Consensus 82 ~~~~~~l~~~~~~n-----------------------------------~~----------------------------- 97 (156)
T d1bd8a_ 82 DTLKVLVEHGADVN-----------------------------------VP----------------------------- 97 (156)
T ss_dssp HHHHHHHHTTCCSC-----------------------------------CC-----------------------------
T ss_pred cccccccccccccc-----------------------------------cc-----------------------------
Confidence 77777776665411 11
Q ss_pred HHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHHH
Q 044420 209 MHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANIF 288 (545)
Q Consensus 209 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv 288 (545)
|..|.||||+|++.|+.+++++|+ .+++ ++.+|.+|+||||+|+++|+.+++
T Consensus 98 --------------------------~~~~~t~L~~A~~~~~~~i~~~L~-~~~~-~~~~d~~G~TpL~~A~~~g~~~iv 149 (156)
T d1bd8a_ 98 --------------------------DGTGALPIHLAVQEGHTAVVSFLA-AESD-LHRRDARGLTPLELALQRGAQDLV 149 (156)
T ss_dssp --------------------------CTTSCCHHHHHHHHTCHHHHHHHH-TTSC-TTCCCTTSCCHHHHHHHSCCHHHH
T ss_pred --------------------------cCCCCeeecccccccccccccccc-cccc-ccccCCCCCCHHHHHHHcCCHHHH
Confidence 134456666666666666776655 4566 666777777777777777777777
Q ss_pred HHHHhh
Q 044420 289 NLIYEI 294 (545)
Q Consensus 289 ~~Ll~~ 294 (545)
++|+++
T Consensus 150 ~~Ll~h 155 (156)
T d1bd8a_ 150 DILQGH 155 (156)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 777654
No 26
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.93 E-value=1.1e-26 Score=224.84 Aligned_cols=200 Identities=15% Similarity=0.147 Sum_probs=125.5
Q ss_pred CCcccccc-cCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccCCCCC
Q 044420 70 KPEDLTLQ-DRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNLTPED 148 (545)
Q Consensus 70 ~~~~~~~~-d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 148 (545)
.+.++|.. |.+|+||||+||..|+.++|++|+++|+++ +.+|..|+||||.|+..++..- .
T Consensus 95 ~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~~------~----------- 156 (301)
T d1sw6a_ 95 TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYD------S----------- 156 (301)
T ss_dssp SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHH------T-----------
T ss_pred cCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CcCCcccccHHHHhhhcccchh------h-----------
Confidence 46677865 899999999999999999999999999997 8999999999999998765200 0
Q ss_pred hhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCCc
Q 044420 149 QNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDD 228 (545)
Q Consensus 149 ~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 228 (545)
+.++.+..++. ..++.+|..|+||||+++..+....... ...-.++.+++.+...+.
T Consensus 157 -----------~~~~~ll~~l~---~~~~~~d~~g~t~lh~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~ 213 (301)
T d1sw6a_ 157 -----------GTFEALLDYLY---PCLILEDSMNRTILHHIIITSGMTGCSA---------AAKYYLDILMGWIVKKQN 213 (301)
T ss_dssp -----------TCHHHHHHHHG---GGGGEECTTCCCHHHHHHHHHTSTTCHH---------HHHHHHHHHHHHHHHGGG
T ss_pred -----------hhHHHHHHHHh---hhhhhcccccCCHHHHHHHHhCccccHH---------HHHHHHHHHHHHHHhcCC
Confidence 00111111111 2234566777777777765543321100 000012223344444443
Q ss_pred hhhhhhccCCChHHHHHHhcCcHHHHH-----HHHHHCCCcccccccCCCcHHHHHHHhCchHHHHHHHhhccchhhhhh
Q 044420 229 SEFTDLIRKPSHLLFDAAELGNFEFLA-----ELICSYPDLVHELDDNNRSIFHIAVLHRHANIFNLIYEIGFTKELMAT 303 (545)
Q Consensus 229 ~~~~~~~~~g~tpLh~A~~~g~~~~v~-----~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~n 303 (545)
.........+.++++.+........+. .++... +|.+|.+|+||||+|+++|+.++|++|+++|++ ++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd----~~ 286 (301)
T d1sw6a_ 214 RPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM---LNAQDSNGDTCLNIAARLGNISIVDALLDYGAD----PF 286 (301)
T ss_dssp CCEEEC----------------CHHHHHCSHHHHHHHT---TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC----TT
T ss_pred cchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcC---ccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CC
Confidence 333333345566666665554433332 223322 678899999999999999999999999999999 77
Q ss_pred cccCCCCChhhhhc
Q 044420 304 FKDHDQNNMLHLAA 317 (545)
Q Consensus 304 ~~d~~G~TpLh~A~ 317 (545)
.+|++|+||||+|+
T Consensus 287 ~~n~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 287 IANKSGLRPVDFGA 300 (301)
T ss_dssp CCCTTSCCGGGGTC
T ss_pred CCCCCCCCHHHHcC
Confidence 89999999999997
No 27
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.93 E-value=1.3e-25 Score=194.36 Aligned_cols=149 Identities=21% Similarity=0.195 Sum_probs=98.1
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCC
Q 044420 48 TLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQ 127 (545)
Q Consensus 48 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 127 (545)
||||.||+.|+.++|++||+ +|++++ .|..|.||||+|+..++.++++.++...... ...+..+.++++.++...+
T Consensus 4 t~L~~Aa~~g~~~~v~~LL~--~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 79 (153)
T d1awcb_ 4 KKLLEAARAGQDDEVRILMA--NGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHH--HTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCHHHHHHHHH--cCCCcc-cccCCCccccccccccccccccccccccccc-ccccccccccccccccccc
Confidence 66666666666666666666 456555 4666666666666666666666666666554 4555566666666666666
Q ss_pred HHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHHHHhCCCCccccccchhhH
Q 044420 128 RDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHVLARKPSAFASRNQGLLTR 207 (545)
Q Consensus 128 ~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~ 207 (545)
.+++++++.++.+. +
T Consensus 80 ~~~~~~l~~~~~~~-----------------------------------~------------------------------ 94 (153)
T d1awcb_ 80 ANIVEVLLKHGADV-----------------------------------N------------------------------ 94 (153)
T ss_dssp HHHHHHHHTTTCCT-----------------------------------T------------------------------
T ss_pred ceeeecccccCCcc-----------------------------------c------------------------------
Confidence 66666666555431 0
Q ss_pred hHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccccCCCcHHHHHHHhCchHH
Q 044420 208 LMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELDDNNRSIFHIAVLHRHANI 287 (545)
Q Consensus 208 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~i 287 (545)
.++.+|.||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+.+|+.++
T Consensus 95 -------------------------~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad-~~~~d~~g~Tpl~~A~~~g~~ei 148 (153)
T d1awcb_ 95 -------------------------AKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDL 148 (153)
T ss_dssp -------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred -------------------------cccccCchHHHhhhhcchhheeeeccccccC-CcccCCCCCCHHHHHHHcCCHHH
Confidence 1124556666666777777777777777777 67777777777777777777777
Q ss_pred HHHH
Q 044420 288 FNLI 291 (545)
Q Consensus 288 v~~L 291 (545)
+++|
T Consensus 149 v~lL 152 (153)
T d1awcb_ 149 AEIL 152 (153)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 7765
No 28
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=9.3e-25 Score=189.59 Aligned_cols=151 Identities=18% Similarity=0.212 Sum_probs=132.4
Q ss_pred HHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHH
Q 044420 11 VPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVA 90 (545)
Q Consensus 11 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~ 90 (545)
..||.||..|+.++|+.|++ ..+ .+++ ..|..|+||||+|+. |+.+++++|++ .+.+++.++..|.+|++.++.
T Consensus 4 ~~L~~Aa~~g~~~~vk~lL~-~~~-~~~n-~~d~~g~t~L~~A~~-~~~~~v~~Ll~--~~~~~~~~~~~~~~~l~~~~~ 77 (156)
T d1bd8a_ 4 DRLSGAAARGDVQEVRRLLH-REL-VHPD-ALNRFGKTALQVMMF-GSTAIALELLK--QGASPNVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHH-TTC-CCTT-CCCTTSCCHHHHSCT-TCHHHHHHHHH--TTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHH-hCC-CCCC-ccCCCCCcccccccc-ccccccccccc--ccccccccccccccccccccc
Confidence 45999999999999999999 456 6665 789999999999874 89999999999 799999999999999999999
Q ss_pred hCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHH
Q 044420 91 AGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLE 170 (545)
Q Consensus 91 ~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~ 170 (545)
.++.++++.++++|+++ +.+|.+|.||||+|++.|+.+++++|+ .|++++..+..|.||||+|+..+.. +++ ++|.
T Consensus 78 ~~~~~~~~~~l~~~~~~-n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~-~iv-~~Ll 153 (156)
T d1bd8a_ 78 TGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQ-DLV-DILQ 153 (156)
T ss_dssp TTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCH-HHH-HHHH
T ss_pred ccccccccccccccccc-ccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCH-HHH-HHHH
Confidence 99999999999999997 889999999999999999999999887 6788777888888888888776553 444 4444
Q ss_pred h
Q 044420 171 D 171 (545)
Q Consensus 171 ~ 171 (545)
+
T Consensus 154 ~ 154 (156)
T d1bd8a_ 154 G 154 (156)
T ss_dssp T
T ss_pred h
Confidence 3
No 29
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.92 E-value=4.6e-26 Score=220.49 Aligned_cols=196 Identities=15% Similarity=0.060 Sum_probs=125.8
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCH---HHHHHHHHcCcccccCCCC
Q 044420 37 ILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSI---HIAKIMLKKNERLLTMRGG 113 (545)
Q Consensus 37 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~---~iv~~Ll~~~~~~~~~~~~ 113 (545)
+++...|.+|+||||+||..|+.++|++|++ +|++++.+|..|+||||.||..++. +.++.+++...+....+|.
T Consensus 98 dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~--~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d~ 175 (301)
T d1sw6a_ 98 NLNIPVDEHGNTPLHWLTSIANLELVKHLVK--HGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS 175 (301)
T ss_dssp CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECT
T ss_pred CcCcCcCCCCCCHHHHHHHcCCHHHHHHHHH--CCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhccc
Confidence 4443458999999999999999999999999 8999999999999999999987752 2223333322222256789
Q ss_pred CCCcHHHHHHHcCC----HHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHHHHHhCCCcccccCCCCchHHHH
Q 044420 114 ENMTPLYMAAVLAQ----RDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALKLLEDHSGLAVARDGNYETALHV 189 (545)
Q Consensus 114 ~g~tpL~~A~~~g~----~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~lL~~~~~~~~~~d~~g~tpLh~ 189 (545)
.|+||||+++..+. .+.+++.++. .+..++.............+.++++.
T Consensus 176 ~g~t~lh~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~ 229 (301)
T d1sw6a_ 176 MNRTILHHIIITSGMTGCSAAAKYYLDI--------------------------LMGWIVKKQNRPIQSGTNEKESKPND 229 (301)
T ss_dssp TCCCHHHHHHHHHTSTTCHHHHHHHHHH--------------------------HHHHHHHGGGCCEEEC----------
T ss_pred ccCCHHHHHHHHhCccccHHHHHHHHHH--------------------------HHHHHHhcCCcchhcccccccchhHH
Confidence 99999999886543 3333333221 12223333333344455556666666
Q ss_pred HHhCCCCccccccchhhHhHHHHHHHHHHHHHHHhcCCchhhhhhccCCChHHHHHHhcCcHHHHHHHHHHCCCcccccc
Q 044420 190 LARKPSAFASRNQGLLTRLMHSALQLVKSLWEAILKRDDSEFTDLIRKPSHLLFDAAELGNFEFLAELICSYPDLVHELD 269 (545)
Q Consensus 190 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d 269 (545)
+......... .. .....+.. ..++.+|.+|+||||+|++.|+.++|++|+++|++ ++.+|
T Consensus 230 ~~~~~~~~~~--------------~~--~~~~~~~~---~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd-~~~~n 289 (301)
T d1sw6a_ 230 KNGERKDSIL--------------EN--LDLKWIIA---NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD-PFIAN 289 (301)
T ss_dssp ------CHHH--------------HH--CSHHHHHH---HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC-TTCCC
T ss_pred HHhcchHHHH--------------HH--HhhHHHHh---cCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCC
Confidence 5544422110 00 00111111 12456679999999999999999999999999999 99999
Q ss_pred cCCCcHHHHHH
Q 044420 270 DNNRSIFHIAV 280 (545)
Q Consensus 270 ~~G~t~Lh~A~ 280 (545)
..|+||||+|+
T Consensus 290 ~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 290 KSGLRPVDFGA 300 (301)
T ss_dssp TTSCCGGGGTC
T ss_pred CCCCCHHHHcC
Confidence 99999999985
No 30
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.91 E-value=4.3e-24 Score=184.65 Aligned_cols=144 Identities=17% Similarity=0.138 Sum_probs=129.7
Q ss_pred CCHHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHH
Q 044420 9 ICVPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFA 88 (545)
Q Consensus 9 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A 88 (545)
..||||.||+.|+.++|+.||+ ++ ++++ .|..|+||||+|+..++.++++.++. .+......+..+.++++.+
T Consensus 2 ~~t~L~~Aa~~g~~~~v~~LL~--~g-a~~~--~~~~g~t~L~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 74 (153)
T d1awcb_ 2 LGKKLLEAARAGQDDEVRILMA--NG-APFT--TDWLGTSPLHLAAQYGHFSTTEVLLR--AGVSRDARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH--HT-CCCC--CCTTCCCHHHHHHHHTCHHHHHHHHT--TTCCTTCCCTTCCCHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHHHH--cC-CCcc--cccCCCcccccccccccccccccccc--ccccccccccccccccccc
Confidence 3499999999999999999999 56 5543 68999999999999999999999998 6777777888899999999
Q ss_pred HHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcC
Q 044420 89 VAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTD 160 (545)
Q Consensus 89 ~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~ 160 (545)
+...+.++++.+.+++++. +.+|.+|.||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+.
T Consensus 75 ~~~~~~~~~~~l~~~~~~~-~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~ 145 (153)
T d1awcb_ 75 ASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp HHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cccccceeeecccccCCcc-ccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCC
Confidence 9999999999999999997 8899999999999999999999999999999877777777788877776654
No 31
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=8.8e-25 Score=181.81 Aligned_cols=120 Identities=19% Similarity=0.148 Sum_probs=110.9
Q ss_pred CCHHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCC-cHHHH
Q 044420 9 ICVPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGN-TAFCF 87 (545)
Q Consensus 9 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~-TpLh~ 87 (545)
+.++||.||+.|+.++|++|++ ++ .+++ .+|..|.||||+|+ .|+.+++++|++ +|++++.+|..|. ||||+
T Consensus 3 ~~~~L~~Aa~~G~~~~v~~Ll~--~g-ad~n-~~~~~g~t~l~~a~-~g~~~~v~~Ll~--~ga~~~~~~~~~~~~~L~~ 75 (125)
T d1bi7b_ 3 SADWLATAAARGRVEEVRALLE--AG-ANPN-APNSYGRRPIQVMM-MGSARVAELLLL--HGAEPNCADPATLTRPVHD 75 (125)
T ss_dssp STTHHHHHHHHTCHHHHHHHHT--TT-CCTT-CCCSSSCCTTTSSC-TTCHHHHHHHHT--TTCCCCCCCTTTCCCHHHH
T ss_pred ChhHHHHHHHCCCHHHHHHHHH--cC-Cccc-cccccccccccccc-cccccccccccc--ccccccccccccccccccc
Confidence 5689999999999999999999 67 6776 78999999999775 799999999999 8999999998875 69999
Q ss_pred HHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 044420 88 AVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYD 136 (545)
Q Consensus 88 A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~ 136 (545)
|++.|+.+++++|+++|+++ +.+|.+|+||||+|+++|+.+++++|++
T Consensus 76 A~~~g~~~~v~~Ll~~ga~~-~~~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 76 AAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp HHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred cccccccccccccccccccc-ccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999997 8999999999999999999999999975
No 32
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.90 E-value=3.2e-25 Score=182.41 Aligned_cols=105 Identities=25% Similarity=0.278 Sum_probs=72.2
Q ss_pred HHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHH
Q 044420 11 VPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVA 90 (545)
Q Consensus 11 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~ 90 (545)
|||++||+.|+.++|+.|++ .+ .+++ .+|.+|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+.
T Consensus 4 tpL~~A~~~g~~~~v~~Ll~--~g-~d~n-~~~~~g~t~lh~A~~~~~~~~~~~ll~--~g~din~~d~~g~tpLh~A~~ 77 (118)
T d1myoa_ 4 KEFMWALKNGDLDEVKDYVA--KG-EDVN-RTLEGGRKPLHYAADCGQLEILEFLLL--KGADINAPDKHHITPLLSAVY 77 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHT--TT-CCCC-CCSSSSCCTTHHHHHHSTTTHHHHHHH--SSCTTTCCSSSCSCHHHHHHT
T ss_pred hHHHHHHHCCCHHHHHHHHH--hh-hccc-ccccccccccccccccccccccccccc--ccceeeecccccccchhhhhh
Confidence 66777777777777777776 44 4444 556667777777777777777777776 566777777777777777777
Q ss_pred hCCHHHHHHHHHcCcccccCCCCCCCcHHHHH
Q 044420 91 AGSIHIAKIMLKKNERLLTMRGGENMTPLYMA 122 (545)
Q Consensus 91 ~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 122 (545)
.|+.+++++|+++|+++ +.+|.+|.||||+|
T Consensus 78 ~~~~~~v~~Ll~~Gad~-~~~d~~G~t~l~~a 108 (118)
T d1myoa_ 78 EGHVSCVKLLLSKGADK-TVKGPDGLTALEAT 108 (118)
T ss_dssp TTCCHHHHHHHTTCCCS-SSSSSSTCCCCCTC
T ss_pred cCchhhhhhhhcccccc-eeeCCCCCCHHHHH
Confidence 77777777777777765 66677777777666
No 33
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=5.9e-24 Score=178.00 Aligned_cols=122 Identities=16% Similarity=0.160 Sum_probs=108.4
Q ss_pred HHhHHHHHcCChHHHHHhhcCCCCchhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHH
Q 044420 11 VPLQKAALKGNWPTAKHLLGNEDPRSILCAGIAKGYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVA 90 (545)
Q Consensus 11 t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~ 90 (545)
++|+.||..|+.++|+.|++ ++ .+++ .+|.+|+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+.
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~--~g-~d~n-~~d~~g~t~Lh~A~~~~~~~~~~~ll~--~g~~~~~~d~~g~tpLh~A~~ 76 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIY--EV-DDPS-LPNDEGITALHNAVCAGHTEIVKFLVQ--FGVNVNAADSDGWTPLHCAAS 76 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTS--TT-SSCC-CCCTTSCCHHHHHHHHTCHHHHHHHHH--HTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHH--cC-CCcc-ccccccccccccccccccccccccccc--cccccccccccCcccccccch
Confidence 68999999999999999999 66 6765 789999999999999999999999999 799999999999999999999
Q ss_pred hCCHHHHHHHHHcCcccccCCC-CCCCcHHHHH--HHcCCHHHHHHHHHccc
Q 044420 91 AGSIHIAKIMLKKNERLLTMRG-GENMTPLYMA--AVLAQRDMALYLYDDAK 139 (545)
Q Consensus 91 ~g~~~iv~~Ll~~~~~~~~~~~-~~g~tpL~~A--~~~g~~~iv~~Ll~~~~ 139 (545)
.|+.+++++|+++|+++ +..+ .+|+||++++ ++.|+.+++++|++.+.
T Consensus 77 ~g~~~~v~~Ll~~ga~v-~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~~~ 127 (130)
T d1ycsb1 77 CNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE 127 (130)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHHcChHHHHHHHHhHHH
Confidence 99999999999999997 5444 5688887765 57789999999997654
No 34
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.88 E-value=5.6e-24 Score=174.90 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=93.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcC
Q 044420 47 ETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLA 126 (545)
Q Consensus 47 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 126 (545)
+|||++|++.|+.++|++|++ .|++++.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|+||||+|+.+|
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~--~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~di-n~~d~~g~tpLh~A~~~~ 79 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVA--KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYEG 79 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHT--TTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTT-TCCSSSCSCHHHHHHTTT
T ss_pred ChHHHHHHHCCCHHHHHHHHH--hhhcccccccccccccccccccccccccccccccccee-eecccccccchhhhhhcC
Confidence 589999999999999999999 89999999999999999999999999999999999997 899999999999999999
Q ss_pred CHHHHHHHHHcccCCccCCCCChhhHH
Q 044420 127 QRDMALYLYDDAKAKDNLTPEDQNALF 153 (545)
Q Consensus 127 ~~~iv~~Ll~~~~~~~~~~~~~~t~l~ 153 (545)
+.+++++|+++|++++..+..|.||++
T Consensus 80 ~~~~v~~Ll~~Gad~~~~d~~G~t~l~ 106 (118)
T d1myoa_ 80 HVSCVKLLLSKGADKTVKGPDGLTALE 106 (118)
T ss_dssp CCHHHHHHHTTCCCSSSSSSSTCCCCC
T ss_pred chhhhhhhhcccccceeeCCCCCCHHH
Confidence 999999999999874444444444433
No 35
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88 E-value=1.4e-22 Score=174.09 Aligned_cols=125 Identities=21% Similarity=0.205 Sum_probs=111.0
Q ss_pred CHHhHHHHHcCChHHHHHhhcCCCCchhhh-----hccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCcccccccCCC
Q 044420 10 CVPLQKAALKGNWPTAKHLLGNEDPRSILC-----AGIAKGYETLLHLAAGA---RQTGFVEELLKLMKPEDLTLQDRNG 81 (545)
Q Consensus 10 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~-----~~~~~~g~T~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~d~~g 81 (545)
...|+.|++.++.+.+..++. .+ .+.. ...+..|+||||+|++. |+.++|++|++ +|++++.+|.+|
T Consensus 7 l~~L~~Av~~~dl~~l~~~~~--~g-~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~--~gadin~~d~~g 81 (154)
T d1dcqa1 7 LHSLCEAVKTRDIFGLLQAYA--DG-VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ--NSGNLDKQTGKG 81 (154)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH--TT-CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH--HCSCTTCCCTTC
T ss_pred HHHHHHHHHhCCHHHHHHHHH--cC-CCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHH--cCCChhhhhhhh
Confidence 345778999999999999988 43 3332 12367799999999975 67899999999 799999999999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCCHHHHHHHHHcccC
Q 044420 82 NTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQRDMALYLYDDAKA 140 (545)
Q Consensus 82 ~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~ 140 (545)
+||||+||..|+.+++++|+++|+++ +.+|.+|+||||+|++.|+.+++++|++.++.
T Consensus 82 ~TpLh~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~ 139 (154)
T d1dcqa1 82 STALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQALSG 139 (154)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred ccccccccccccccccccccccCccc-cccCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999999999999997 89999999999999999999999999998764
No 36
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=2.2e-22 Score=167.06 Aligned_cols=118 Identities=16% Similarity=0.090 Sum_probs=104.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCC-cHHHHHH
Q 044420 45 GYETLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENM-TPLYMAA 123 (545)
Q Consensus 45 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~-tpL~~A~ 123 (545)
.+.++||+|++.|+.++|++|++ +|++++.+|..|.||||.|+ .|+.+++++|+++|+++ +.++..|. ||||+|+
T Consensus 2 p~~~~L~~Aa~~G~~~~v~~Ll~--~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~L~~A~ 77 (125)
T d1bi7b_ 2 PSADWLATAAARGRVEEVRALLE--AGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAA 77 (125)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHT--TTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHH
T ss_pred CChhHHHHHHHCCCHHHHHHHHH--cCCccccccccccccccccc-ccccccccccccccccc-cccccccccccccccc
Confidence 35689999999999999999999 89999999999999999775 79999999999999997 77777765 6999999
Q ss_pred HcCCHHHHHHHHHcccCCccCCCCChhhHHHHHHhcCcHHHHHH
Q 044420 124 VLAQRDMALYLYDDAKAKDNLTPEDQNALFFTCISTDLHDLALK 167 (545)
Q Consensus 124 ~~g~~~iv~~Ll~~~~~~~~~~~~~~t~l~~aa~~~~~~~~~~~ 167 (545)
+.|+.+++++|+++|++++..+..|.||+|+|+..+. .+++..
T Consensus 78 ~~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~-~~~v~~ 120 (125)
T d1bi7b_ 78 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGH-RDVARY 120 (125)
T ss_dssp HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTC-HHHHHH
T ss_pred ccccccccccccccccccccccCCCCCHHHHHHHcCC-HHHHHH
Confidence 9999999999999999988888899999998887654 455433
No 37
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2.1e-22 Score=168.41 Aligned_cols=115 Identities=21% Similarity=0.212 Sum_probs=100.4
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCCcHHHHHHHhCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCC
Q 044420 48 TLLHLAAGARQTGFVEELLKLMKPEDLTLQDRNGNTAFCFAVAAGSIHIAKIMLKKNERLLTMRGGENMTPLYMAAVLAQ 127 (545)
Q Consensus 48 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 127 (545)
++||.||..|+.++|+.|++ +|++++.+|.+|+||||+|+..|+.+++++|++.|+++ +.+|.+|+||||+|+.+|+
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~--~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~-~~~d~~g~tpLh~A~~~g~ 79 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIY--EVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNN 79 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTS--TTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHH--cCCCcccccccccccccccccccccccccccccccccc-ccccccCcccccccchhhH
Confidence 68999999999999999999 89999999999999999999999999999999999997 8999999999999999999
Q ss_pred HHHHHHHHHcccCCccCCCC-ChhhHHHHH-HhcCcHHHH
Q 044420 128 RDMALYLYDDAKAKDNLTPE-DQNALFFTC-ISTDLHDLA 165 (545)
Q Consensus 128 ~~iv~~Ll~~~~~~~~~~~~-~~t~l~~aa-~~~~~~~~~ 165 (545)
.+++++|+++|++++..+.. +.+++..+. ...++.+++
T Consensus 80 ~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv 119 (130)
T d1ycsb1 80 VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS 119 (130)
T ss_dssp HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHH
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHH
Confidence 99999999999997766643 556655543 233443443
No 38
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=4e-20 Score=158.54 Aligned_cols=89 Identities=20% Similarity=0.212 Sum_probs=67.9
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccc------cCCCCcHHHHHHHh---CCHHHHHHHHHcCcccccCCCCCCCcHH
Q 044420 49 LLHLAAGARQTGFVEELLKLMKPEDLTLQ------DRNGNTAFCFAVAA---GSIHIAKIMLKKNERLLTMRGGENMTPL 119 (545)
Q Consensus 49 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~------d~~g~TpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 119 (545)
.|+.|++.++++.+..++. .|.+++.. +..|+||||+|++. |+.++|++|+++|+++ +.+|.+|+|||
T Consensus 9 ~L~~Av~~~dl~~l~~~~~--~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadi-n~~d~~g~TpL 85 (154)
T d1dcqa1 9 SLCEAVKTRDIFGLLQAYA--DGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTAL 85 (154)
T ss_dssp HHHHHHHTTCHHHHHHHHH--TTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHH
T ss_pred HHHHHHHhCCHHHHHHHHH--cCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCCh-hhhhhhhcccc
Confidence 3556778888888888887 56665543 56788888888864 5678888888888886 77888888888
Q ss_pred HHHHHcCCHHHHHHHHHcccC
Q 044420 120 YMAAVLAQRDMALYLYDDAKA 140 (545)
Q Consensus 120 ~~A~~~g~~~iv~~Ll~~~~~ 140 (545)
|+|++.|+.+++++|+++|++
T Consensus 86 h~A~~~~~~~~v~~Ll~~gad 106 (154)
T d1dcqa1 86 HYCCLTDNAECLKLLLRGKAS 106 (154)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC
T ss_pred ccccccccccccccccccCcc
Confidence 888888888888888877765
No 39
>d1ppjw_ f.23.14.1 (W:) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=39.29 E-value=21 Score=22.66 Aligned_cols=33 Identities=12% Similarity=0.113 Sum_probs=27.3
Q ss_pred HHHHHHHhHHHhHHHHHHHhhcccccccccccC
Q 044420 513 PVTLFVLLQYPLLNDIFYSTYHARTITRIALTR 545 (545)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (545)
...+++=..|....+-+|-+.-.++.||++++|
T Consensus 26 ~gAf~fE~~fD~~~d~iwe~~NkGKlWKDIk~k 58 (62)
T d1ppjw_ 26 VGALFFERAFDQGADAIYEHINEGKLWKHIKHK 58 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 334466678888999999999999999999875
No 40
>d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]}
Probab=29.36 E-value=23 Score=22.60 Aligned_cols=20 Identities=20% Similarity=0.233 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 044420 475 ALFISIINMMVAFSTTFFLA 494 (545)
Q Consensus 475 ~l~~~~~~m~~af~~~~~~v 494 (545)
+..++++++..+|++|+|-.
T Consensus 9 lT~it~iflP~t~i~gifGM 28 (64)
T d2iuba2 9 LTIIATIFMPLTFIAGIYGM 28 (64)
T ss_dssp HHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHhhhcc
Confidence 45678888889999999843
No 41
>d3cx5i1 f.23.14.1 (I:4-58) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.83 E-value=23 Score=21.87 Aligned_cols=31 Identities=6% Similarity=0.078 Sum_probs=25.5
Q ss_pred HHHHHhHHHhHHHHHHHhhcccccccccccC
Q 044420 515 TLFVLLQYPLLNDIFYSTYHARTITRIALTR 545 (545)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (545)
.+++=..|....+-+|-+.-.++.||++++|
T Consensus 22 Af~fe~~fD~~~d~~we~~NkGKlWkDIk~k 52 (55)
T d3cx5i1 22 AFVFQTVFDTAITSWYENHNKGKLWKDVKAR 52 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCcccHHHHHHh
Confidence 3455577888999999999999999998864
Done!