BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044422
(519 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224140139|ref|XP_002323442.1| predicted protein [Populus trichocarpa]
gi|222868072|gb|EEF05203.1| predicted protein [Populus trichocarpa]
Length = 526
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/535 (62%), Positives = 401/535 (74%), Gaps = 26/535 (4%)
Query: 1 MNIIFLQTCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTR 60
MNI+ LQT +KK A +TLS +R F S K ++ + +K L KALR+LDII+P+T
Sbjct: 1 MNIVSLQTRLRKKIPYATHLFQTLSQ-HRPFSSHKFRRTTQTKRLDKALRILDIITPKTT 59
Query: 61 DSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLI 120
T + HLR+IQDF Q S Q+ ++DF NS G +VFD++L++ ++ ++
Sbjct: 60 APTNGQNHLRVIQDFFQAHSNRTSEQRLSNDFISPNSDNGDFSVFDEILESSFINNDE-- 117
Query: 121 SMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
D + L DAS LS AV+SC STR++RGG Y CLAI GFIAN Y+GSSL+T Y
Sbjct: 118 ----DSNATSLSFDASVLSNAVSSCASTRDLRGGIQYHCLAISAGFIANAYIGSSLVTFY 173
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
KC + +AYKVF+EMPVRNVVSWTAII+ FAQ+WQVDMCL+LY +MRNS L+PNDFTFT
Sbjct: 174 GKCGELDNAYKVFKEMPVRNVVSWTAIISGFAQDWQVDMCLQLYCLMRNSTLKPNDFTFT 233
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S+LSACTGSGALGQGRSAHCQ I MGF SY+ +AN+L+SMYCKCGNVE+A ++F NM GK
Sbjct: 234 SLLSACTGSGALGQGRSAHCQIIEMGFVSYLHIANALVSMYCKCGNVEDAFHIFENMVGK 293
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
DIVSWNSMIAGYAQHGLAV+ I LFE M Q VKPDAITFLGV+SSCRH G VE G+ YF
Sbjct: 294 DIVSWNSMIAGYAQHGLAVQGIGLFERMKSQGVKPDAITFLGVLSSCRHAGFVEGGRNYF 353
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------- 407
+SM ++G+KPELDHYSC+VDLLGRAGLLEEA+ FI++MP+ PNAVIW
Sbjct: 354 NSMVEYGVKPELDHYSCIVDLLGRAGLLEEAQYFIERMPVSPNAVIWGSLVSSCRLHGSV 413
Query: 408 ----EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
+AAE+ LLLEPECAATHVQLANLYA V WDQAARVRKLMKD+ LKTNPGCSWIEI
Sbjct: 414 WIGIQAAENTLLLEPECAATHVQLANLYASVGFWDQAARVRKLMKDRRLKTNPGCSWIEI 473
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEP 518
N VYRFRAED SNTR+SEI VLD+LVD M TLG PE+ E V +A H P
Sbjct: 474 KNEVYRFRAEDCSNTRVSEIHDVLDWLVDHMITLGRAPEMQE--VSEAIHDNVCP 526
>gi|359481497|ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Vitis vinifera]
Length = 510
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 313/527 (59%), Positives = 386/527 (73%), Gaps = 41/527 (7%)
Query: 1 MNIIFLQTCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTR 60
MN I L+ +KKP S + S+ + S+ S + I HK L +L+++SP T
Sbjct: 1 MNSISLRQFIRKKPSSPI------SVPFSSYGSSFSQNIKRKTKTHKQLGILNLVSPTTD 54
Query: 61 DSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLI 120
+ + HLRLIQDFL + ++ + DF +NS +SN +L+T ++ E+ I
Sbjct: 55 CAENRQTHLRLIQDFLPIPTNQFAQKRASDDFAHSNSLEETSN----MLETNFLNEEESI 110
Query: 121 SMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
VDAS LS A++ C S+R+++ G + CLAIRTGF+ NVYVGS LI+ Y
Sbjct: 111 ------------VDASALSHALSLCASSRSLKSGVQFHCLAIRTGFVGNVYVGSCLISFY 158
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
SKC + AY+VFEEMPV+NVVSWTAIIA FAQEW VD CLELY MRNS L+PND TFT
Sbjct: 159 SKCGELCHAYRVFEEMPVKNVVSWTAIIAGFAQEWLVDGCLELYSRMRNSTLKPNDLTFT 218
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
+LS CTG G+LG+GRSAHCQTI MGF SY+ VAN+LISMYCKCGNVE+A Y+F M GK
Sbjct: 219 CLLSTCTGGGSLGRGRSAHCQTIEMGFDSYVHVANALISMYCKCGNVEDAYYIFERMDGK 278
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
DIVSWNSMIAG+AQHGLAV+AIDLFEEM KQ++KPDAITFLGV+SSCRH GLV++G+ YF
Sbjct: 279 DIVSWNSMIAGHAQHGLAVQAIDLFEEMKKQKLKPDAITFLGVLSSCRHVGLVKQGQFYF 338
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------- 407
+SM +HG+KPELDH++CVVDLLGRAGLLEEARDFI +MPI+PNA+IW
Sbjct: 339 NSMVEHGVKPELDHFACVVDLLGRAGLLEEARDFIVKMPIHPNAIIWGSLLSSCRLHGSV 398
Query: 408 ----EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
EAAE+RLLLEPECAATH+QLA+LYA V CWDQAARVRKLMK KGLKT PGCSWIE+
Sbjct: 399 WLGIEAAENRLLLEPECAATHLQLASLYASVGCWDQAARVRKLMKGKGLKTEPGCSWIEV 458
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
N +YRFRAE+ SN L+EI V+D L D M++LGY ++HEE+ DD
Sbjct: 459 RNEIYRFRAEEWSNGGLTEISAVVDSLADHMRSLGY--DMHEEEADD 503
>gi|297741511|emb|CBI32643.3| unnamed protein product [Vitis vinifera]
Length = 1400
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 311/524 (59%), Positives = 384/524 (73%), Gaps = 41/524 (7%)
Query: 4 IFLQTCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDST 63
I L+ +KKP S + S+ + S+ S + I HK L +L+++SP T +
Sbjct: 865 ISLRQFIRKKPSSPI------SVPFSSYGSSFSQNIKRKTKTHKQLGILNLVSPTTDCAE 918
Query: 64 KTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH 123
+ HLRLIQDFL + ++ + DF +NS +SN +L+T ++ E+ I
Sbjct: 919 NRQTHLRLIQDFLPIPTNQFAQKRASDDFAHSNSLEETSN----MLETNFLNEEESI--- 971
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
VDAS LS A++ C S+R+++ G + CLAIRTGF+ NVYVGS LI+ YSKC
Sbjct: 972 ---------VDASALSHALSLCASSRSLKSGVQFHCLAIRTGFVGNVYVGSCLISFYSKC 1022
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ AY+VFEEMPV+NVVSWTAIIA FAQEW VD CLELY MRNS L+PND TFT +L
Sbjct: 1023 GELCHAYRVFEEMPVKNVVSWTAIIAGFAQEWLVDGCLELYSRMRNSTLKPNDLTFTCLL 1082
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
S CTG G+LG+GRSAHCQTI MGF SY+ VAN+LISMYCKCGNVE+A Y+F M GKDIV
Sbjct: 1083 STCTGGGSLGRGRSAHCQTIEMGFDSYVHVANALISMYCKCGNVEDAYYIFERMDGKDIV 1142
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SWNSMIAG+AQHGLAV+AIDLFEEM KQ++KPDAITFLGV+SSCRH GLV++G+ YF+SM
Sbjct: 1143 SWNSMIAGHAQHGLAVQAIDLFEEMKKQKLKPDAITFLGVLSSCRHVGLVKQGQFYFNSM 1202
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------------- 407
+HG+KPELDH++CVVDLLGRAGLLEEARDFI +MPI+PNA+IW
Sbjct: 1203 VEHGVKPELDHFACVVDLLGRAGLLEEARDFIVKMPIHPNAIIWGSLLSSCRLHGSVWLG 1262
Query: 408 -EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNV 466
EAAE+RLLLEPECAATH+QLA+LYA V CWDQAARVRKLMK KGLKT PGCSWIE+ N
Sbjct: 1263 IEAAENRLLLEPECAATHLQLASLYASVGCWDQAARVRKLMKGKGLKTEPGCSWIEVRNE 1322
Query: 467 VYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
+YRFRAE+ SN L+EI V+D L D M++LGY ++HEE+ DD
Sbjct: 1323 IYRFRAEEWSNGGLTEISAVVDSLADHMRSLGY--DMHEEEADD 1364
>gi|356564808|ref|XP_003550640.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Glycine max]
Length = 501
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/484 (56%), Positives = 354/484 (73%), Gaps = 42/484 (8%)
Query: 43 KSLHKALRVLDIISPRTRDST--KTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFG 100
K L A RVL+++S + R +T + + HLRLI D L+ + + H+ + TN T
Sbjct: 34 KGLAIAQRVLNLLSSQKRGTTVDRRQSHLRLIDDMLE----NYVTIPLGHN-SATNGT-- 86
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHDLHRER-LKVDASFLSTAVTSCGSTRNIRGGAPYQC 159
T + +E + LH E+ VD FLS AV+SCGS R++ GG Y C
Sbjct: 87 ----------TAEITIESSV-----LHMEQGFGVDVFFLSQAVSSCGSKRDLWGGIQYHC 131
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
LAI TGF+A+VYVGSSLI+LYS+C + DA +VFEEMPVRNVVSWTAIIA FAQEW VDM
Sbjct: 132 LAITTGFVASVYVGSSLISLYSRCAFLGDACRVFEEMPVRNVVSWTAIIAGFAQEWHVDM 191
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
CLEL++ MR S L PN FT+TS+LSAC GSGALG GR AHCQ IRMGF SY+ + N+LIS
Sbjct: 192 CLELFQQMRGSDLRPNYFTYTSLLSACMGSGALGHGRCAHCQIIRMGFHSYLHIENALIS 251
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY KCG +++A+++F NM +D+V+WN+MI+GYAQHGLA AI+LFEEM+KQ V PDA+T
Sbjct: 252 MYSKCGAIDDALHIFENMVSRDVVTWNTMISGYAQHGLAQEAINLFEEMIKQGVNPDAVT 311
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+LGV+SSCRHGGLV+EG+VYF+SM +HG++P LDHYSC+VDLLGRAGLL EARDFI+ MP
Sbjct: 312 YLGVLSSCRHGGLVKEGQVYFNSMVEHGVQPGLDHYSCIVDLLGRAGLLLEARDFIQNMP 371
Query: 400 IYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
I+PNAV+W EAAE+RLL+EP C+AT QLANLYA V W++ AR
Sbjct: 372 IFPNAVVWGSLLSSSRLHGSVPIGIEAAENRLLMEPGCSATLQQLANLYARVGWWNKVAR 431
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VRK MKDKGLK NPGCSW+E+ + V+RF A+DKSN+R++++L +++ L+D M +L +
Sbjct: 432 VRKSMKDKGLKPNPGCSWVEVKSKVHRFEAQDKSNSRMADMLLIMNSLMDHMSSLNLQSQ 491
Query: 503 VHEE 506
+ EE
Sbjct: 492 MFEE 495
>gi|449448934|ref|XP_004142220.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Cucumis sativus]
gi|449502632|ref|XP_004161699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Cucumis sativus]
Length = 524
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/490 (57%), Positives = 358/490 (73%), Gaps = 30/490 (6%)
Query: 42 SKSLHKALRVLDIISPRTRDSTKT-EVHLRLIQDFLQTDSKHLDSQKF--NHDFTGTNST 98
+ +L K R+LD+ISP+ S ++ + HLRLIQDFLQTDS SQ D +
Sbjct: 42 TTNLPKPPRLLDLISPKGDVSYESRQTHLRLIQDFLQTDSGQCRSQTLPVGCDSRSIGLS 101
Query: 99 FGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQ 158
SS V DQ ++ DV+ R K +A+ +S+ ++ C S RN+RGG Y
Sbjct: 102 KDSSFVLDQECESGHWDVQSFAG--------RFKFNANDISSVLSLCNSQRNLRGGIQYH 153
Query: 159 CLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
+AIRTGFIANVYVGSSL++LY KC + +AY+VF+EMPVRNVVSWTAIIA FA EWQV+
Sbjct: 154 SVAIRTGFIANVYVGSSLVSLYGKCGELSNAYRVFDEMPVRNVVSWTAIIAGFAVEWQVN 213
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
MCLEL++ M+ L+PN+FTF +IL+ACTGSGALG GRS HCQT++MGF SY+ VAN+LI
Sbjct: 214 MCLELFQEMKRMALQPNEFTFVTILTACTGSGALGVGRSLHCQTVKMGFHSYLHVANALI 273
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDA 337
SMYCKCG + A+Y+F M KD VSWNSMIAGYAQHGL++RAIDLF+ M KQ+ V+ DA
Sbjct: 274 SMYCKCGALNFALYIFEAMEVKDTVSWNSMIAGYAQHGLSLRAIDLFKAMRKQKQVEADA 333
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
ITFLGV+SSCRH G VEEG+ YF+ M + GLKPELDHYSCV+DLLGRAGLL+EA++FI++
Sbjct: 334 ITFLGVLSSCRHAGFVEEGRHYFNLMVELGLKPELDHYSCVIDLLGRAGLLKEAQNFIEK 393
Query: 398 MPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQA 440
MPI PN+++W +AAESRLLL+P+CA+TH+QL NLYA D A
Sbjct: 394 MPITPNSIVWGSLLSACRLHGNVWIGLKAAESRLLLQPDCASTHLQLTNLYAKAGYLDDA 453
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
AR+RK+MKDKGLKT PG SWIEI N VYRF+AEDKSN + EI ++D +V+ M+ +G
Sbjct: 454 ARLRKIMKDKGLKTAPGYSWIEIQNKVYRFKAEDKSNPLMVEIFGLIDGMVNHMRFVGCA 513
Query: 501 PEVHEEKVDD 510
E+ E+KV++
Sbjct: 514 HEL-EDKVNE 522
>gi|255568478|ref|XP_002525213.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535510|gb|EEF37179.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 501
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 258/379 (68%), Positives = 311/379 (82%), Gaps = 17/379 (4%)
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
R++ GG + CLAI +GFI+N YVGSSLITLY KC + +A+K+F EMPVRNVV+WTAII
Sbjct: 120 RDLPGGIQFHCLAITSGFISNSYVGSSLITLYGKCGKLDNAHKLFHEMPVRNVVTWTAII 179
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ FAQE QVD+CLEL+ +MRNS L+PNDFTFTS+LSACTGSGALGQG SAHCQ I+MGF
Sbjct: 180 SGFAQECQVDVCLELFSVMRNSTLKPNDFTFTSLLSACTGSGALGQGTSAHCQIIQMGFH 239
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
SY+ VAN+LISMYCK G+V +A Y+FNN++ KDIVSWNSMI+GYAQHGLA++AIDLFE+M
Sbjct: 240 SYLHVANALISMYCKSGSVHDAFYIFNNIYSKDIVSWNSMISGYAQHGLAMQAIDLFEKM 299
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
K VKPD+ITFLGV+S+CRH G V+ G+ YF+SM ++ L+P+LDHYSC+VDLLGRAGL+
Sbjct: 300 TKLGVKPDSITFLGVLSACRHAGFVQGGRNYFNSMVEYHLRPQLDHYSCLVDLLGRAGLI 359
Query: 389 EEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLY 431
EEA D I +MPI PNAVIW +AAE RLLLEP CAATHVQLANLY
Sbjct: 360 EEALDIILRMPILPNAVIWGSLLSSCRLHGSVWIGIQAAEQRLLLEPACAATHVQLANLY 419
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A VR WD+AA+VRK+MKD GLKTNPG SWIEI N V+RFRAED+SNTR+ EIL VLD L+
Sbjct: 420 ASVRYWDKAAKVRKVMKDTGLKTNPGYSWIEIKNKVHRFRAEDRSNTRVGEILTVLDCLL 479
Query: 492 DQMKTLGYVPEVHEEKVDD 510
D M LGYVPE+ +E+V+D
Sbjct: 480 DHMMILGYVPELIKEEVND 498
>gi|15228119|ref|NP_181269.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216847|sp|Q9ZUT4.1|PP192_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37320
gi|4056486|gb|AAC98052.1| hypothetical protein [Arabidopsis thaliana]
gi|37202040|gb|AAQ89635.1| At2g37320 [Arabidopsis thaliana]
gi|51969760|dbj|BAD43572.1| hypothetical protein [Arabidopsis thaliana]
gi|330254289|gb|AEC09383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 271/508 (53%), Positives = 354/508 (69%), Gaps = 27/508 (5%)
Query: 8 TCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEV 67
+C + C A ++ S RS + + S + ++LRVLDIIS ++ + +
Sbjct: 2 SCLRNYYCRAFGYKQSRSCYSRSLNREIANESSEVERRARSLRVLDIISSKSGGVSNRQD 61
Query: 68 HLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLH 127
H +Q+F QTDS Q + DF + + G S+V ++++ L +
Sbjct: 62 HFGFVQEFRQTDSWRFRGQAISEDFDLSRTKNGVSSVLEEVM---------LEDSSSSVK 112
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R+ DA LS+AV SCG R+ R G+ + CLA++ GFI++VY+GSSL+ LY +
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+AYKVFEEMP RNVVSWTA+I+ FAQEW+VD+CL+LY MR S +PND+TFT++LSACT
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
GSGALGQGRS HCQT+ MG SY+ ++NSLISMYCKCG++++A +F+ KD+VSWNS
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 308 MIAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
MIAGYAQHGLA++AI+LFE MM K KPDAIT+LGV+SSCRH GLV+EG+ +F+ MA+H
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEH 352
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EA 409
GLKPEL+HYSC+VDLLGR GLL+EA + I+ MP+ PN+VIW A
Sbjct: 353 GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRA 412
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
AE RL+LEP+CAATHVQLANLYA V W +AA VRKLMKDKGLKTNPGCSWIEI N V+
Sbjct: 413 AEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFM 472
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMKTL 497
F+AED SN R+ EI+ VL L+D M+ L
Sbjct: 473 FKAEDGSNCRMLEIVHVLHCLIDHMEFL 500
>gi|297823557|ref|XP_002879661.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325500|gb|EFH55920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 500
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/508 (52%), Positives = 356/508 (70%), Gaps = 27/508 (5%)
Query: 8 TCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEV 67
+C C A++ +++ S RS + S + ++LRVLDIIS ++ + +
Sbjct: 2 SCLSNYYCRAVRYIQSRSCYSRSLNRDIANESSEVERRARSLRVLDIISSKSGGVSNRQN 61
Query: 68 HLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLH 127
H +Q+FLQTDS+ Q + DF + + G S+V ++++ L +
Sbjct: 62 HFGFVQEFLQTDSRQFRGQAISEDFDLSRTKNGVSSVLEEVM---------LEDSSSSVK 112
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R+ DA LS+AV SCGS R+ R G+ + CLA++ GFI++VY+GSSL+ LY +
Sbjct: 113 RDGWSFDAYGLSSAVRSCGSNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+A+KVF EMP NVVSWTA+I+ FAQEW+VD+C++LY MRNS +PND+TFT++LSACT
Sbjct: 173 NAHKVFAEMPDNNVVSWTAMISGFAQEWRVDICMKLYSEMRNSTSDPNDYTFTALLSACT 232
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
GSGALGQGRS HCQT++MG SY+ ++NSLISMYCKCG++++A +F+ KD+VSWNS
Sbjct: 233 GSGALGQGRSVHCQTLQMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 308 MIAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
MIAGYAQ+GLA +AI+LFE MM K +KPDAIT+LG++SSCRH GLV EG+ +F+ MA+
Sbjct: 293 MIAGYAQYGLATQAIELFELMMPKSGIKPDAITYLGLLSSCRHAGLVIEGRKFFNLMAER 352
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EA 409
GLKPEL+HYSC+VDLLGR GLL+EA + I+ MP+ PN+VIW A
Sbjct: 353 GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWMGIRA 412
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
AE RL+LEPECAATHVQLANLYA V W +AA VRKLMKDKGL+TNPGCSWIEI N ++
Sbjct: 413 AEERLILEPECAATHVQLANLYASVGYWKEAATVRKLMKDKGLRTNPGCSWIEIDNNIFM 472
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMKTL 497
F+AED SN R+ EI+ VL L+D M+ L
Sbjct: 473 FKAEDGSNCRMLEIVHVLHCLIDHMEFL 500
>gi|357508177|ref|XP_003624377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499392|gb|AES80595.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 487
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 264/502 (52%), Positives = 337/502 (67%), Gaps = 63/502 (12%)
Query: 27 IYRSFCSQKLKQISSSKSLHKALRVLDIISPR--TRDSTKTEVHLRLIQDFLQTDSKHLD 84
I+R F +L +++K L ALR+L ++SP+ D HLRL++D L+
Sbjct: 22 IFRPFSFYRLGPKNTNKDLTNALRILKLVSPKKTVTDIENRRSHLRLVEDILENT----- 76
Query: 85 SQKFNHDFTGTNSTFGSS--NVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAV 142
T + GS+ V + +L++ V+++E + L +D FLS A+
Sbjct: 77 ----------TTNPLGSNLKTVTETILESSVLEME-----------QGLGIDVCFLSHAL 115
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+ CGS R+ GG Y CLAIR GFIANVYVGSSLI+LYS+C ++ DAY+VF+EM VRNVV
Sbjct: 116 SLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVV 175
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SWTAIIA FAQEW+VDMCLEL+R MR L+PN FT+TS+LSAC GSGALG GR HCQ
Sbjct: 176 SWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSGALGHGRGVHCQI 235
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
I+MGF Y+ V N+LI+MY KCG + +A+Y+F NM KD+V+WNSMI G G
Sbjct: 236 IQMGFHCYLHVENALIAMYSKCGVIVDALYIFENMVSKDVVTWNSMIVGMRIMG------ 289
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
V PDA+TFLG++SSCRHGGLV+EG+VYF SM HGL+PELDHYSC+VDLL
Sbjct: 290 ----------VNPDAVTFLGILSSCRHGGLVKEGQVYFSSMVDHGLQPELDHYSCIVDLL 339
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHV 425
GRAGLL EA DFI+ MP+ PNAVIW AAESRL LEP C++T +
Sbjct: 340 GRAGLLLEALDFIQNMPVCPNAVIWGSLLSSSRLHGNVWIGIRAAESRLSLEPGCSSTLL 399
Query: 426 QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILP 485
QLANLYA V W+Q ARVR+LMKDKGLK NPGCSWIE+ N V+RF ++DKSN+R++ IL
Sbjct: 400 QLANLYASVGWWNQVARVRQLMKDKGLKPNPGCSWIEVKNKVHRFESQDKSNSRMNGILL 459
Query: 486 VLDFLVDQMKTLGYVPEVHEEK 507
++D LVD M L ++ EE+
Sbjct: 460 IMDSLVDHMSGLSLQFQISEEE 481
>gi|357127969|ref|XP_003565649.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Brachypodium distachyon]
Length = 567
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/483 (45%), Positives = 305/483 (63%), Gaps = 33/483 (6%)
Query: 43 KSLHKALRVLDIISPRTRDS-TKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGS 101
+ +H ALRVL +I + + + H RLI D + L Q NH + F S
Sbjct: 78 RDIHDALRVLLLIPGKAFNGKAEGPSHSRLINDCMHDI---LGVQSENHGMHNGKAQFVS 134
Query: 102 SNVFDQLLDT-PVVDVEKLISMHH-----------DLHRERLKVDASFLSTAVTSCGSTR 149
++ L D + D+ SM+ ++ R + D S ++A++ C +
Sbjct: 135 ASSNPTLPDIIDLRDISACYSMNKFKKENKFMLLAEMRRRGISADVSIFASAISFCAVKQ 194
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+IRGG L ++ G+ V G+SLI+LY++C + +AY+VF+ MPVRNVVSWTA+I+
Sbjct: 195 SIRGGGQLHALLVKVGYDLAVLSGTSLISLYARCYQLENAYQVFQNMPVRNVVSWTALIS 254
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+AQ+ QV+ CL+++++MR S PND TF +I S CT LG GRS H +RMGF
Sbjct: 255 GYAQDNQVEPCLQVFQLMRQSACRPNDITFATIFSVCTNHALLGLGRSVHGLELRMGFDL 314
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ + N+LISMY KCG+++EA ++F ++ KD+VSWNSMI GY+Q+GLA + L +EM
Sbjct: 315 CVHILNALISMYAKCGSIDEAQFIFQSIACKDLVSWNSMIFGYSQYGLAEHCLKLLKEME 374
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
K+ + PD I+FLG++SSCRH LVEEG+ F +M K G++PELDHYSC+VDLLGRAGLL+
Sbjct: 375 KEHIVPDVISFLGILSSCRHACLVEEGRRCFKAMLKLGIEPELDHYSCMVDLLGRAGLLD 434
Query: 390 EARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYA 432
EA D I M + PNAVIW AAE RL LEP CAATHVQLANLYA
Sbjct: 435 EACDLIHTMSMTPNAVIWGSLLSACRMYGNIPIGIHAAEHRLKLEPSCAATHVQLANLYA 494
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
+ CW ARVRK+MK++GLKTN GCSWIEI + VY F AE++S ++++ +L VLD L
Sbjct: 495 SIDCWSDVARVRKMMKERGLKTNTGCSWIEIGSKVYTFTAENRSKSQVNNVLSVLDCLQS 554
Query: 493 QMK 495
M+
Sbjct: 555 HME 557
>gi|242049240|ref|XP_002462364.1| hypothetical protein SORBIDRAFT_02g024422 [Sorghum bicolor]
gi|241925741|gb|EER98885.1| hypothetical protein SORBIDRAFT_02g024422 [Sorghum bicolor]
Length = 520
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/507 (43%), Positives = 315/507 (62%), Gaps = 38/507 (7%)
Query: 23 TLSIIYRSFCSQKLKQISSSK---SLHKALRVLDII-SPRTRDSTKTEVHLRLIQ----D 74
TL ++ +F + + S + +L ALRVLD++ S D + H RLI D
Sbjct: 5 TLHLVVANFSTSPTLEKSRKQRHANLQNALRVLDLVPSKHHHDQEEVPSHHRLINGCMGD 64
Query: 75 FLQTDSKHLDSQKFNHDFTGTNSTFGS---SNVFDQLLDTPV------VDVEKLISMHHD 125
L S+ +K F ++S SN+F +T V + E + +
Sbjct: 65 ILGVQSRLHAMRKGKESFANSSSNQAQPERSNIFSN--NTSVCPSITKLTKEDMFMQIVE 122
Query: 126 LHRE-RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
LHR ++ DAS L++A++ C + + G + L ++ G+++++ +GSSLI+ YS+C
Sbjct: 123 LHRRGQISSDASILASALSYCADGKTLTAGVQFHALLVKVGYVSSIPIGSSLISFYSRCG 182
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ A++VF+ M +N V+WTA+I+ +AQ+ QV+ CL L+ +MR S+ +PND TF +I S
Sbjct: 183 QLEIAHRVFQNMTAKNTVTWTALISGYAQDNQVEPCLHLFALMRRSVCKPNDITFATIFS 242
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
CT L G+S +RMGF SY+ V+N+LISMY KCG++ EA VF ++ KD+VS
Sbjct: 243 VCTNHAFLVLGKSVQALQMRMGFDSYVHVSNALISMYAKCGSIGEARAVFESITCKDLVS 302
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WNS+I GY+QHGLA + L +E M+ + PDAI+FLGV+SSCRH LV EG+ F +M
Sbjct: 303 WNSLIFGYSQHGLAEHCLGLLKE-MEGHIIPDAISFLGVLSSCRHACLVAEGRRCFRAMI 361
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------- 407
+HG+ PE+DHYSC+VDL GRAGLL+EA D I+ MP+ PN VIW
Sbjct: 362 EHGVIPEIDHYSCMVDLFGRAGLLDEAWDLIQTMPMPPNGVIWGSLLASCRVHGSISIGI 421
Query: 408 EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
+AAE RL LEP CAATHVQLANLY + CWD ARVRK+MK++GLKTN GCSWIE+ N V
Sbjct: 422 QAAEHRLKLEPSCAATHVQLANLYGSIGCWDDVARVRKVMKERGLKTNIGCSWIEVGNKV 481
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQM 494
Y F AE++S ++++ +L VLD L M
Sbjct: 482 YTFTAENRSKSQVNNVLDVLDCLQSHM 508
>gi|212722152|ref|NP_001132130.1| uncharacterized protein LOC100193547 [Zea mays]
gi|194693508|gb|ACF80838.1| unknown [Zea mays]
gi|413918286|gb|AFW58218.1| hypothetical protein ZEAMMB73_151558 [Zea mays]
Length = 552
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/505 (42%), Positives = 308/505 (60%), Gaps = 34/505 (6%)
Query: 23 TLSIIYRSFCSQKLKQISSSK---SLHKALRVLDII-SPRTRDSTKTEVHLRLIQ----D 74
T+ ++ +F + +IS + +L ALR+LD++ S D + H RLI D
Sbjct: 23 TIQLVVANFGTSPTLEISRKQRCANLQNALRILDLVPSKHHHDQEEVPSHHRLINGCMGD 82
Query: 75 FLQTDSKHLDSQKFNHDFTGTNSTFGS-------SNVFDQLLDTPVVDVEKLISMHHDLH 127
S+ ++ F +NS SN + E + +LH
Sbjct: 83 ISGVQSRLHTMRRGKESFANSNSNQAQPKHGNIVSNNTSVCPSITRLTKEDMFMQIVELH 142
Query: 128 RE-RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI 186
R ++ DAS L++A++ C + + G + ++ G+++++ +GSSLI+ YS+C +
Sbjct: 143 RRGQISSDASILASALSYCADEKTLTTGVQFHAQLVKVGYVSSIPIGSSLISFYSRCSQL 202
Query: 187 IDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC 246
A+++F+ M ++ V+WTA+I+ +AQ+ QV+ CL L+ +MR S+ +PND TF +ILS C
Sbjct: 203 EIAHRIFQNMTAKSTVTWTALISGYAQDNQVEPCLHLFALMRQSVCKPNDITFATILSVC 262
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
T L G+S +RMGF SY+ V+N+LISMY KCG++ EA VF ++ KD+VSWN
Sbjct: 263 TNHAFLVLGKSVQALQMRMGFGSYVHVSNALISMYAKCGSIGEARAVFESITCKDLVSWN 322
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
S+I GY+QHGLA + L E M+ + PDAI+FLGV+SSCRH LV EG+ F +M +H
Sbjct: 323 SLIFGYSQHGLAEHCLYLLRE-MEGHIIPDAISFLGVLSSCRHACLVAEGRRCFRAMIEH 381
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EA 409
G+ PE+DHYSC+VDL GRAGLL+EA D I+ MP+ PN VIW +A
Sbjct: 382 GVIPEIDHYSCMVDLFGRAGLLDEAWDLIQTMPMPPNGVIWGSLLASCRLHGSISIGIQA 441
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
AE RL LEP CAATHVQLANLY + CWD ARVRK+MK++GLKTN GCSWIE+ N VY
Sbjct: 442 AEHRLKLEPSCAATHVQLANLYGSIGCWDDVARVRKVMKERGLKTNIGCSWIEVGNKVYT 501
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQM 494
F AE++S +++ +L VLD L M
Sbjct: 502 FTAENRSKNQVNNVLVVLDCLQSHM 526
>gi|297611639|ref|NP_001067683.2| Os11g0275400 [Oryza sativa Japonica Group]
gi|62701773|gb|AAX92846.1| expressed protein [Oryza sativa Japonica Group]
gi|62701774|gb|AAX92847.1| expressed protein [Oryza sativa Japonica Group]
gi|77549819|gb|ABA92616.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|77549820|gb|ABA92617.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584289|gb|EAZ25220.1| hypothetical protein OsJ_09020 [Oryza sativa Japonica Group]
gi|255679996|dbj|BAF28046.2| Os11g0275400 [Oryza sativa Japonica Group]
Length = 609
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/499 (44%), Positives = 300/499 (60%), Gaps = 32/499 (6%)
Query: 28 YRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKT--EVHLRLIQD----FLQTDSK 81
Y + +Q + +++ AL+VL+++ PR D K H RLI D L S
Sbjct: 101 YGTSAAQSTSKDQHGSNINSALKVLNLV-PRKADYDKVGGPCHHRLIHDCMNDILGVQSN 159
Query: 82 HL----DSQKFNHDFTGTNSTFGS--SNVFDQLLDTPVVDVEKLISMHHDLHRE-RLKVD 134
H + FN + F S SN L E + + +LHR+ D
Sbjct: 160 HTIHKGNGVTFNSCSNPAQAKFDSFVSNNGSALCSRTRFIKEDMFMLIMELHRKGETSTD 219
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
S L+ A++SC + G L ++ G + V++GSSLITLYS+C + +Y VF+
Sbjct: 220 QSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQ 279
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
MP +N VSWTA+I+ FA +V+ CL L+ M S +PND TF ++ S CT L
Sbjct: 280 TMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLAL 339
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
GRS H +RMGF SY+ V+N+L+SMY KCG ++EA ++F + KD+VSWN++I G +Q
Sbjct: 340 GRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQFIFGCIACKDLVSWNAIIFGCSQ 399
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+GLA +DL +EM +Q + PDA++FLGV+SSCRH LVEEG+ F +M +HG+KP LDH
Sbjct: 400 YGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDH 459
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLE 417
YSC+VDLLGRAGLLEEA D I+ M I PNAVIW +AAE RL LE
Sbjct: 460 YSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLE 519
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
P CAATH+QLANLYA + CW ARVR MK +GLKTN GCSWIE+ + VY F AE++S
Sbjct: 520 PGCAATHIQLANLYATIGCWSDVARVRMAMKARGLKTNIGCSWIEVGDKVYSFTAENRSK 579
Query: 478 T-RLSEILPVLDFLVDQMK 495
+ +++ +L VLD L M+
Sbjct: 580 SHQVNNVLAVLDCLQAHME 598
>gi|297608225|ref|NP_001061322.2| Os08g0238100 [Oryza sativa Japonica Group]
gi|255678268|dbj|BAF23236.2| Os08g0238100 [Oryza sativa Japonica Group]
Length = 647
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/499 (44%), Positives = 299/499 (59%), Gaps = 32/499 (6%)
Query: 28 YRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKT--EVHLRLIQD----FLQTDSK 81
Y SQ + +++ AL+VL+++ PR D K H +LI D L S
Sbjct: 139 YAQPSSQSTSKDQHGSNINSALKVLNLV-PRKADYDKVGGPCHHQLIHDCMNDILGVQSN 197
Query: 82 HL----DSQKFNHDFTGTNSTFGS--SNVFDQLLDTPVVDVEKLISMHHDLHRE-RLKVD 134
H + FN + F S SN L E + + +LHR+ D
Sbjct: 198 HTIHKGNGVTFNSCSNPAQAKFDSFVSNNGSALRSRTRFIKEDMFMLIMELHRKGETSTD 257
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
S L+ A++SC + G L ++ G + V++GSSLITLYS+C + +Y VF+
Sbjct: 258 QSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQ 317
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
MP +N VSWTA+I+ FA +V+ CL L+ MR S +PND TF ++ S CT L
Sbjct: 318 TMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNHALLAL 377
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+S H +RMGF SY+ V+N+L+SMY KCG ++EA +F + KD+VSWN+MI G +Q
Sbjct: 378 GKSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDLVSWNAMIFGCSQ 437
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+GLA +DL +EM +Q + PDA++FLGV+SSCRH LVEEG+ F +M +HG+KP LDH
Sbjct: 438 YGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDH 497
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLE 417
YSC+VDLLGRAGLLEEA D I+ M I PNAVIW +AAE RL LE
Sbjct: 498 YSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLE 557
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
P CAATH+QLANLYA + CW ARVR MK +GLKTN GCSWIE+ + VY F AE++S
Sbjct: 558 PGCAATHIQLANLYATIGCWSDVARVRMAMKARGLKTNIGCSWIEVGDKVYSFTAENRSK 617
Query: 478 T-RLSEILPVLDFLVDQMK 495
+ +++ +L +LD L M+
Sbjct: 618 SHQVNNVLAILDCLQAHME 636
>gi|40253530|dbj|BAD05478.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 724
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/499 (43%), Positives = 300/499 (60%), Gaps = 32/499 (6%)
Query: 28 YRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKT--EVHLRLIQD----FLQTDSK 81
Y + +Q + +++ AL+VL+++ PR D K H +LI D L S
Sbjct: 216 YGTSAAQSTSKDQHGSNINSALKVLNLV-PRKADYDKVGGPCHHQLIHDCMNDILGVQSN 274
Query: 82 HL----DSQKFNHDFTGTNSTFGS--SNVFDQLLDTPVVDVEKLISMHHDLHRE-RLKVD 134
H + FN + F S SN L E + + +LHR+ D
Sbjct: 275 HTIHKGNGVTFNSCSNPAQAKFDSFVSNNGSALRSRTRFIKEDMFMLIMELHRKGETSTD 334
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
S L+ A++SC + G L ++ G + V++GSSLITLYS+C + +Y VF+
Sbjct: 335 QSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQ 394
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
MP +N VSWTA+I+ FA +V+ CL L+ MR S +PND TF ++ S CT L
Sbjct: 395 TMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNHALLAL 454
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+S H +RMGF SY+ V+N+L+SMY KCG ++EA +F + KD+VSWN+MI G +Q
Sbjct: 455 GKSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDLVSWNAMIFGCSQ 514
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+GLA +DL +EM +Q + PDA++FLGV+SSCRH LVEEG+ F +M +HG+KP LDH
Sbjct: 515 YGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDH 574
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLE 417
YSC+VDLLGRAGLLEEA D I+ M I PNAVIW +AAE RL LE
Sbjct: 575 YSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLE 634
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
P CAATH+QLANLYA + CW ARVR MK +GLKTN GCSWIE+ + VY F AE++S
Sbjct: 635 PGCAATHIQLANLYATIGCWSDVARVRMAMKARGLKTNIGCSWIEVGDKVYSFTAENRSK 694
Query: 478 T-RLSEILPVLDFLVDQMK 495
+ +++ +L +LD L M+
Sbjct: 695 SHQVNNVLAILDCLQAHME 713
>gi|194707160|gb|ACF87664.1| unknown [Zea mays]
gi|413920054|gb|AFW59986.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 553
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/483 (43%), Positives = 299/483 (61%), Gaps = 35/483 (7%)
Query: 44 SLHKALRVLDII-SPRTRDSTKTEVHLRLIQ----DFLQTDSKHLDSQKFNHDFTGTNST 98
+L ALR+LD++ S D + H RLI D S+ +K F ++S
Sbjct: 47 NLQNALRILDLVPSKHHHDQEEVPSHHRLINGCMGDISAVQSRLHTMRKGKESFANSSSN 106
Query: 99 FGS---SNVFDQLLDTPV------VDVEKLISMHHDLHRE-RLKVDASFLSTAVTSCGST 148
SN+ +T V + E + +LHR ++ DAS L +A++ C +
Sbjct: 107 QAQPKHSNIVSN--NTSVCPFITRLTKEDMFMQIVELHRSGQISSDASILVSALSYCAAE 164
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+ + G + ++ G+++++ G+SLI+ YS+C + A++VF+ M ++ V+WTA+I
Sbjct: 165 KIVTAGVQFHAQLVKVGYVSSISTGNSLISFYSRCSQLEIAHRVFQNMTAKSTVTWTALI 224
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ +AQ+ QV+ CL L+ +MR+S+ +PND TF +I S CT L G+S +RMGF
Sbjct: 225 SGYAQDNQVEPCLHLFALMRHSVCKPNDVTFATIFSVCTNHAFLVLGKSVQALQMRMGFD 284
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
SY+ V+N+LISMY KCG++ EA VF ++ KD+VSWNS+I GY+QHGLA + L E
Sbjct: 285 SYVHVSNALISMYAKCGSIGEARAVFESIRCKDLVSWNSLIFGYSQHGLAEHCLYLLRE- 343
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
M+ + PDAI+FLGV+SSCRH LV EG+ F +M +HG+ PE+DHYSC+VDL GRAGLL
Sbjct: 344 MEGHITPDAISFLGVLSSCRHACLVAEGRRCFRAMIEHGVVPEIDHYSCMVDLFGRAGLL 403
Query: 389 EEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLY 431
+EA D I+ MP+ PN V+W +AAE RL LEP CAA HVQLANLY
Sbjct: 404 DEAWDLIQTMPMPPNGVVWGSLLASCRVHGSTWIGIQAAEHRLKLEPSCAAIHVQLANLY 463
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
+ CWD ARVRK+MK++GLKTN GCSWIE+ N VY F AE++S +++ +L VLD L
Sbjct: 464 GSIGCWDDVARVRKVMKERGLKTNIGCSWIEVGNKVYTFTAENRSKNQVNNVLVVLDCLQ 523
Query: 492 DQM 494
M
Sbjct: 524 SHM 526
>gi|226503379|ref|NP_001142111.1| uncharacterized protein LOC100274275 [Zea mays]
gi|195615590|gb|ACG29625.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 553
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/483 (43%), Positives = 299/483 (61%), Gaps = 35/483 (7%)
Query: 44 SLHKALRVLDII-SPRTRDSTKTEVHLRLIQ----DFLQTDSKHLDSQKFNHDFTGTNST 98
+L ALR+LD++ S D + H RLI D S+ +K F ++S
Sbjct: 47 NLQNALRILDLVPSKHHHDQEEVPSHHRLINGCMGDISAVQSRLHTMRKGKESFANSSSN 106
Query: 99 FGS---SNVFDQLLDTPV------VDVEKLISMHHDLHRE-RLKVDASFLSTAVTSCGST 148
SN+ +T V + E + +LHR ++ DAS L +A++ C +
Sbjct: 107 QAQPKHSNIVSN--NTSVCPFITRLTKEDMFMQIVELHRSGQISSDASILVSALSYCAAE 164
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+ + G + ++ G+++++ G+SLI+ YS+C + A++VF+ M ++ V+WTA+I
Sbjct: 165 KIVTAGVQFHAQLVKVGYVSSISTGNSLISFYSRCSQLEIAHRVFQNMTAKSTVTWTALI 224
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ +AQ+ QV+ CL L+ +MR+S+ +PND TF +I S CT L G+S +RMGF
Sbjct: 225 SGYAQDNQVEPCLHLFALMRHSVCKPNDVTFATIFSVCTNHAFLVLGKSVQALQMRMGFD 284
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
SY+ V+N+LISMY KCG++ EA VF ++ KD+VSW+S+I GY+QHGLA + L E
Sbjct: 285 SYVHVSNALISMYAKCGSIGEARAVFESIRCKDLVSWSSLIFGYSQHGLAEHCLYLLRE- 343
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
M+ + PDAI+FLGV+SSCRH LV EG+ F +M +HG+ PE+DHYSC+VDL GRAGLL
Sbjct: 344 MEGHITPDAISFLGVLSSCRHACLVAEGRRCFRAMIEHGVVPEIDHYSCMVDLFGRAGLL 403
Query: 389 EEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLY 431
+EA D I+ MP+ PN V+W +AAE RL LEP CAA HVQLANLY
Sbjct: 404 DEAWDLIQTMPMPPNGVVWGSLLASCRVHGSTWIGIQAAEHRLKLEPSCAAIHVQLANLY 463
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
+ CWD ARVRK+MK++GLKTN GCSWIE+ N VY F AE++S +++ +L VLD L
Sbjct: 464 GSIGCWDDVARVRKVMKERGLKTNIGCSWIEVGNKVYTFTAENRSKNQVNNVLVVLDCLQ 523
Query: 492 DQM 494
M
Sbjct: 524 SHM 526
>gi|326499065|dbj|BAK06023.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 572
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/516 (42%), Positives = 312/516 (60%), Gaps = 41/516 (7%)
Query: 16 SALQSLKTLSIIYRSFCSQKLKQISS---SKSLHKALRVLDIISPRTRDST-KTEVHLRL 71
S L SL + + +F + + S+ +S+H ALRVL +++ + + K H R+
Sbjct: 43 SHLPSLSPIRLWLANFGTHLPPERSTKQGGRSIHDALRVLHLVTGKASNGKEKGPSHHRI 102
Query: 72 IQDFLQTDSKHLDSQKFNHDFTGTNSTF-GSSNVFDQLLDTPV--VDVEKLISMHH---- 124
I D + L Q NH F SSN +Q+L + D+ M+
Sbjct: 103 INDCMHDI---LGVQLGNHGMCNGELQFTSSSNNTEQILPDTIDSHDISASPFMNKPAKG 159
Query: 125 -------DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
+LHR + D S L+ A++ C ++IRGGA Q L ++ G+ +V G+SLI
Sbjct: 160 NKFLLLVELHRRGISADISILAYAMSFCAVKQSIRGGA--QLLMVKIGYELSVLSGTSLI 217
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
LY++C + +A +VF++MP++N VSWT +I+ +A++ QV+ CL ++++MR S+ PND
Sbjct: 218 ILYARCGQLGNACRVFQDMPIKNTVSWTTLISGYARDNQVEPCLRVFQLMRQSVCRPNDI 277
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF +I S CT L G+S H +RMGF + V+N+LISMY KCGN+ EA +F ++
Sbjct: 278 TFPTIFSVCTNHALLALGKSIHGLELRMGFDLCVHVSNALISMYVKCGNIIEAQSIFESI 337
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
KD+VSWNSMI GY+QHGL + L +EM ++++ PD I+FLG++SSCRH LVEEG+
Sbjct: 338 VCKDLVSWNSMIFGYSQHGLVECCLSLLKEMDEEQIVPDVISFLGILSSCRHACLVEEGR 397
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------- 407
F++M K G++PEL+HYSC+VDLLGR G L+EA D I M PNAVIW
Sbjct: 398 CCFNAMIKLGIEPELEHYSCMVDLLGRVGFLDEAWDLIHTMSTPPNAVIWGSLLAACRMH 457
Query: 408 -------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
AAE RL LEP CAATHVQLANLYA CW ARVR +MK+ GLKTN GCSW
Sbjct: 458 GNIPIGIHAAEHRLKLEPGCAATHVQLANLYASNDCWSDVARVRMMMKEGGLKTNTGCSW 517
Query: 461 IEIMNVVYRFRAEDKSNT-RLSEILPVLDFLVDQMK 495
IEI + VY F AE++ + +++ +L VLD L M+
Sbjct: 518 IEIGSKVYTFTAENRPKSHQVNNVLTVLDCLRSHME 553
>gi|222640155|gb|EEE68287.1| hypothetical protein OsJ_26530 [Oryza sativa Japonica Group]
Length = 483
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/411 (47%), Positives = 271/411 (65%), Gaps = 20/411 (4%)
Query: 117 EKLISMHHDLHRE-RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
E + + +LHR+ D S L+ A++SC + G L ++ G + V++GSS
Sbjct: 52 EDMFMLIMELHRKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSS 111
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LITLYS+C + +Y VF+ MP +N VSWTA+I+ FA +V+ CL L+ MR S +PN
Sbjct: 112 LITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPN 171
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
D TF ++ S CT L G+S H +RMGF SY+ V+N+L+SMY KCG ++EA +F
Sbjct: 172 DITFATLFSVCTNHALLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFG 231
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ KD+VSWN+MI G +Q+GLA +DL +EM +Q + PDA++FLGV+SSCRH LVEE
Sbjct: 232 FIACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEE 291
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
G+ F +M +HG+KP LDHYSC+VDLLGRAGLLEEA D I+ M I PNAVIW
Sbjct: 292 GRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCR 351
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
+AAE RL LEP CAATH+QLANLYA + CW ARVR MK +GLKTN GC
Sbjct: 352 VHGNISIGIQAAEHRLKLEPGCAATHIQLANLYATIGCWSDVARVRMAMKARGLKTNIGC 411
Query: 459 SWIEIMNVVYRFRAEDKSNT-RLSEILPVLDFLVDQMKTLG-YVPEVHEEK 507
SWIE+ + VY F AE++S + +++ +L +LD L M+ ++ ++H+++
Sbjct: 412 SWIEVGDKVYSFTAENRSKSHQVNNVLAILDCLQAHMECKSVWIDKIHDQQ 462
>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
Length = 711
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 273/430 (63%), Gaps = 25/430 (5%)
Query: 91 DFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLK-------VDASFLSTAVT 143
D T S ++ ++ LL + V I + HR +L+ D S L+ A++
Sbjct: 271 DLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMS 330
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
SC + G L ++ G + V++GSSLITLYS+C + +Y VF+ MP +N VS
Sbjct: 331 SCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVS 390
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA+I+ FA +V+ CL L+ MR S +PND TF ++ S CT L G+S H +
Sbjct: 391 WTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNHALLALGKSVHALQM 450
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
RMGF SY+ V+N+L+SMY KCG ++EA +F + KD+VSWN+MI G +Q+GLA +D
Sbjct: 451 RMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCLD 510
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
L +EM +Q + PDA++FLGV+SSCRH LVEEG+ F +M +HG+KP LDHYSC+VDLLG
Sbjct: 511 LLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLG 570
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQ 426
RAGLLEEA D I+ M I PNAVIW +AAE RL LEP CAATH+Q
Sbjct: 571 RAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGCAATHIQ 630
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT-RLSEILP 485
LANLYA + CW ARVR MK +GLKTN GCSWIE+ + VY F AE++S + +++ +L
Sbjct: 631 LANLYATIGCWSDVARVRMAMKARGLKTNIGCSWIEVGDKVYSFTAENRSKSHQVNNVLA 690
Query: 486 VLDFLVDQMK 495
+LD L M+
Sbjct: 691 ILDCLQAHME 700
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 203/312 (65%), Gaps = 18/312 (5%)
Query: 125 DLHRE-RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+LHR+ D S L+ A++SC + G L ++ G + V++GSSLITLYS+C
Sbjct: 2 ELHRKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRC 61
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ +Y VF+ MP +N VSWTA+I+ FA +V+ CL L+ M S +PND TF ++
Sbjct: 62 SQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLF 121
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
S CT L GRS H +RMGF SY+ V+N+L+SMY KCG +EEA ++F + KD+V
Sbjct: 122 SVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLV 181
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SWN++I G +Q+ LA +DL +EM +Q + PDA++FLGV+SSCRH LVEEG+ F +M
Sbjct: 182 SWNAIIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTM 241
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------------- 407
+HG+KP LDHYSC+VDLLGRAGLLEEA D I+ M I PNAVIW
Sbjct: 242 IEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIG 301
Query: 408 -EAAESRLLLEP 418
+AAE RL LEP
Sbjct: 302 IQAAEHRLKLEP 313
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 7/270 (2%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G L +R GF + V+V ++L+++Y+KC I +A +F + +++VSW AII +Q
Sbjct: 133 GRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQ 192
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
CL+L + M + P+ +F +LS+C + + +GR I G +
Sbjct: 193 YVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDH 252
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQHG---LAVRAID--LFEE 327
+ ++ + + G +EEA + M + V W S++ HG + ++A + L E
Sbjct: 253 YSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLE 312
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
K D +SSC + +G + K G + S ++ L R
Sbjct: 313 PGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQ 372
Query: 388 LEEARDFIKQMPIYPNAVIWEAAESRLLLE 417
LE + + MP N V W A S L
Sbjct: 373 LESSYLVFQTMPT-KNTVSWTAMISGFALH 401
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 250/401 (62%), Gaps = 18/401 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + D+ +E + +D + +T+CG R ++ G L IR+G+ NV+VGS+L+ +
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KCR + A VF+ M +NVVSWTA++ + Q + + ++ M+ + +EP+DFT
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTL 374
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S++S+C +L +G HCQ + G S+I V+N+LI++Y KCG++E++ +F+ M
Sbjct: 375 GSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSF 434
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D VSW ++++GYAQ G A IDLFE M+ Q +KPDA+TF+ V+S+C GLVE G+ Y
Sbjct: 435 RDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQY 494
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
F+SM K HG+ P DHY+C++DL GRAG LEEA++FI +MP P+++ W
Sbjct: 495 FESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AAES L L+P+ A ++ L+++YA W A++R+ M++KG + PG SWI
Sbjct: 555 NEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWI 614
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ + VY F A+D+S+ +I L+ L +M GYVP+
Sbjct: 615 KYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPD 655
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 141/279 (50%), Gaps = 32/279 (11%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV------------------- 202
++ GF A V+VGSSL+ +Y+K ++ A +VF+E+ RNVV
Sbjct: 165 VKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSK 224
Query: 203 ------------SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
SWT +I Q ++L+R MR + + +TF S+L+AC G
Sbjct: 225 RLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLR 284
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL +G+ H IR G+ + V ++L+ MYCKC +V A VF M K++VSW +M+
Sbjct: 285 ALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLV 344
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY Q+G + A+ +F +M + ++PD T VISSC + +EEG + GL
Sbjct: 345 GYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLIS 404
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + ++ L G+ G +E++ +M + + V W A
Sbjct: 405 FITVSNALITLYGKCGSIEDSNQLFDEMS-FRDEVSWTA 442
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 68/330 (20%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C TRN CL I++ ++ ++LI YSK I A VF++MP N SW
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 205 TAIIAAFAQEWQVDMCLELYR--------------------------------MMRNSML 232
+++A+++ + E++ MM++ +L
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV----- 287
N TF+++L + G + GR H Q ++ GF +Y+ V +SL+ MY K G V
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 288 ------EEAVYVFNNM-----------------HG---KDIVSWNSMIAGYAQHGLAVRA 321
E V ++N M HG +D +SW +MI G Q+GL A
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGL--VEEGKVYFDSMAKHGLKPELDHYSCVV 379
+DLF +M ++ + D TF V+++C GGL ++EGK + + G + S +V
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTAC--GGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
D+ + + A K+M N V W A
Sbjct: 313 DMYCKCRSVRYAEAVFKRMA-NKNVVSWTA 341
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 158/412 (38%), Positives = 250/412 (60%), Gaps = 20/412 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + ++ E L++D + +T+CG ++ G IRT + N++VGS+L+ +
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC+ I A VF +M +NVVSWTA++ + Q + ++++ M+N+ +EP+DFT
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S++S+C +L +G HC+ + G S+I V+N+L+++Y KCG++E++ +F+ M
Sbjct: 379 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY 438
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
D VSW ++++GYAQ G A + LFE M+ KPD +TF+GV+S+C GLV++G
Sbjct: 439 VDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQI 498
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
F+SM K H + P DHY+C++DL RAG LEEAR FI +MP P+A+ W
Sbjct: 499 FESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHR 558
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AAES L LEP A+++ L+++YA W++ A +RK M+DKGL+ PGCSWI
Sbjct: 559 NMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWI 618
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE--EKVDDA 511
+ N V+ F A+D+SN +I L+ L +M GYVP+++ VDD+
Sbjct: 619 KYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDS 670
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 144/279 (51%), Gaps = 32/279 (11%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV------------------- 202
++ GF + V+VGS L+ +YSK ++ A + F+EMP +NVV
Sbjct: 169 VKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSR 228
Query: 203 ------------SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
SWTA+IA F Q ++L+R MR LE + +TF S+L+AC G
Sbjct: 229 QLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVM 288
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL +G+ H IR + I V ++L+ MYCKC +++ A VF M+ K++VSW +M+
Sbjct: 289 ALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLV 348
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY Q+G + A+ +F +M ++PD T VISSC + +EEG + GL
Sbjct: 349 GYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLIS 408
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + +V L G+ G +E++ +M Y + V W A
Sbjct: 409 FITVSNALVTLYGKCGSIEDSHRLFSEMS-YVDEVSWTA 446
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 33/273 (12%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM- 227
N+Y ++L++ YSK + + +VF MP R++VSW ++I+A+A + ++ Y +M
Sbjct: 74 NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
N N +++L + G + G H ++ GF SY+ V + L+ MY K G V
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193
Query: 288 EEAVYVFNNMHGKDIVSWNS-------------------------------MIAGYAQHG 316
A F+ M K++V +N+ MIAG+ Q+G
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNG 253
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
L AIDLF EM + ++ D TF V+++C ++EGK + + + + S
Sbjct: 254 LDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGS 313
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+VD+ + ++ A ++M N V W A
Sbjct: 314 ALVDMYCKCKSIKSAETVFRKMNC-KNVVSWTA 345
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P F +++SA + R Q + +S+ N+L+S Y K + E V
Sbjct: 42 PEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW----NTLLSSYSKLACLPEMERV 97
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ------RVKPDAITFLGVISSC 347
F+ M +D+VSWNS+I+ YA G ++++ + M+ R+ + L C
Sbjct: 98 FHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGC 157
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
H GL G V K G + + S +VD+ + GL+ AR +MP
Sbjct: 158 VHLGLQVHGHV-----VKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMP 204
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 246/402 (61%), Gaps = 18/402 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M ++ +D + +T+CGS + G IRT NV+VGS+L+ +
Sbjct: 255 LDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDM 314
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSKCR I A VF+ MP +NV+SWTA++ + Q + ++++ M+ + +EP+DFT
Sbjct: 315 YSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTL 374
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S++S+C +L +G HC+ + G S+I V+N+LI++Y KCG+ E + +F M+
Sbjct: 375 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNI 434
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D VSW +++AGYAQ G A I LFE M+ +KPD +TF+GV+S+C GLVE+G Y
Sbjct: 435 RDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQY 494
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
F+SM K HG+ P +DH +C++DLLGRAG LEEAR+FI MP +P+ V W
Sbjct: 495 FESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AA+S + LEP+ A++V L++LYA WD+ A++R+ M+DK ++ PG SWI
Sbjct: 555 DMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWI 614
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ V+ F A+D+S+ L +I L+ L +M GYVP++
Sbjct: 615 KYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDM 656
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 145/303 (47%), Gaps = 32/303 (10%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
ST + C R + G ++ GF ++V+VGS L+ +Y+K +I DA + F+EMP
Sbjct: 141 FSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMP 200
Query: 198 VRNVV-------------------------------SWTAIIAAFAQEWQVDMCLELYRM 226
RNVV SWT +I Q L+++R
Sbjct: 201 ERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFRE 260
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
MR + + FTF S+L+AC ALG+G+ H IR + V ++L+ MY KC +
Sbjct: 261 MRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRS 320
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A VF M K+++SW +M+ GY Q+G + A+ +F EM + V+PD T VISS
Sbjct: 321 IKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISS 380
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
C + +EEG + GL + + ++ L G+ G E + +M I + V
Sbjct: 381 CANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNI-RDEVS 439
Query: 407 WEA 409
W A
Sbjct: 440 WTA 442
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 33/273 (12%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM- 227
N++ ++++++YSK ++ ++F MP R+ VSW I+ +A + +Y++M
Sbjct: 70 NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK---- 283
+++ + N TF+++L C+ + GR + Q ++ GF S + V + L+ MY K
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189
Query: 284 ---------------------------CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
CG +EE+ +F + +D +SW MI G Q+G
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
L A+D+F EM D TF V+++C + EGK + + K + S
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS 309
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+VD+ + ++ A K+MP N + W A
Sbjct: 310 ALVDMYSKCRSIKSAETVFKRMP-QKNVISWTA 341
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 5/179 (2%)
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L+ ++ ++ +P F ++++A G L + FS+ N+++S+Y
Sbjct: 26 KLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSW----NTILSVY 81
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITF 340
K G + + +FN M +D VSWN I+GYA +G A+ +++ M+K + + ITF
Sbjct: 82 SKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITF 141
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++ C V+ G+ + K G ++ S +VD+ + GL+ +A+ + +MP
Sbjct: 142 STMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMP 200
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 249/410 (60%), Gaps = 28/410 (6%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQC-----LAIRTGFIANVY 171
E+ S+ +H E + + + LST + S + + A Y C L++++GF + Y
Sbjct: 295 EEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQ-----ANYMCRQIHALSLKSGFEFDNY 349
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
V +SLI Y KC + DA +VFEE P+ ++V +T+++ A+AQ+ Q + L LY M++
Sbjct: 350 VVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRG 409
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
++P+ F +S+L+AC A QG+ H ++ GF S I NSL++MY KCG++E+A
Sbjct: 410 IKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDAS 469
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
F+ + + IVSW++MI G AQHG A+ LF++M+K V P+ IT + V+ +C H G
Sbjct: 470 CAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAG 529
Query: 352 LVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--- 407
LV E K YF+SM G++P +HY+C++DLLGRAG LE A + + +MP NA++W
Sbjct: 530 LVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGAL 589
Query: 408 --------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
+AAE L LEPE + THV LAN+YA V WD+ ARVR+LMKD +K
Sbjct: 590 LGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVK 649
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
PG SW+E+ + VY F D+S++R +EI LD L D +K GYVP V
Sbjct: 650 KEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMV 699
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 149/285 (52%), Gaps = 4/285 (1%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H +K + + + +C T+++ G + + TGF ++ +V +SL+ LY+KC
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
DA +F+ +P R+VVSW A+ + + + L+ M S + PN+F+ +S+++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
CTG QGR H I++G+ S AN+L+ MY K G +E+A VF+ + DIVSW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N++IAG H RA++L EM K + P+ T + +C L E G+ S+ K
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVI 406
+ + ++D+ + +++AR K MP I NAVI
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVI 285
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 156/322 (48%), Gaps = 14/322 (4%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFLSTAVTSCGS 147
+S+VFD++ +V +I+ + H+ H L++ + LS+A+ +C
Sbjct: 165 ASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAG 224
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
G I+ ++ ++G LI +YSKC + DA VF+ MP R++++W A+
Sbjct: 225 MALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAV 284
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ +Q + + L+ +M + N T +++L + A R H +++ GF
Sbjct: 285 ISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGF 344
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
V NSLI Y KCG+VE+A VF D+V + S++ YAQ G A+ L+ E
Sbjct: 345 EFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLE 404
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M + +KPD+ ++++C E+GK + K G ++ + +V++ + G
Sbjct: 405 MQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGS 464
Query: 388 LEEARDFIKQMPIYPNAVIWEA 409
+E+A ++P+ V W A
Sbjct: 465 IEDASCAFSRIPVR-GIVSWSA 485
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 177/382 (46%), Gaps = 54/382 (14%)
Query: 99 FGSS-NVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFLSTAVTS 144
FG + ++FD + D VV L S +H D+H E + + + LS+ +
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C + G I+ G+ ++ + ++L+ +Y+K ++ DA VF+E+ ++VSW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
AIIA LEL R M S + PN FT +S L AC G GR H I+
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
M S + LI MY KC ++++A VF M +D+++WN++I+G++Q+ A L
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300
Query: 325 FEEMMKQRVKPDAITFLGVISS---------CRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
F M + + + T V+ S CR +++ S+ K G E D+Y
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCR--------QIHALSL-KSGF--EFDNY 349
Query: 376 --SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAG 433
+ ++D G+ G +E+A ++ PI + V++ + L YA
Sbjct: 350 VVNSLIDTYGKCGHVEDATRVFEESPIV-DLVLFTS-----------------LVTAYAQ 391
Query: 434 VRCWDQAARVRKLMKDKGLKTN 455
++A R+ M+D+G+K +
Sbjct: 392 DGQGEEALRLYLEMQDRGIKPD 413
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 246/403 (61%), Gaps = 18/403 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + ++ E L++D + +T+CG ++ G IRT + N++V S+L+ +
Sbjct: 260 IDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDM 319
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC+ I A VF++M +NVVSWTA++ + Q + ++ + M+ +EP+DFT
Sbjct: 320 YCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTL 379
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S++S+C +L +G H + + G S+I V+N+L+++Y KCG++E++ +FN +
Sbjct: 380 GSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISF 439
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
KD V+W ++++GYAQ G A I LFE M+ +KPD +TF+GV+S+C GLVE+G
Sbjct: 440 KDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQI 499
Query: 360 FDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
F+SM +HG+ P DHY+C++DL RAG +EEAR+FI +MP P+A+ W
Sbjct: 500 FESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYG 559
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AAE + L+P A++V L+++YA W++ AR+RK M+DKGL+ PGCSWI
Sbjct: 560 NMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWI 619
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
+ N V+ F A+DKSN +I L+ L +M GYVP+++
Sbjct: 620 KYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMN 662
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 156/316 (49%), Gaps = 38/316 (12%)
Query: 131 LKVDASF------LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
LK D SF ST + ++ G ++ GF++ V+VGS L+ +YSK
Sbjct: 133 LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMG 192
Query: 185 VIIDAYKVFEEMPVRNVV-------------------------------SWTAIIAAFAQ 213
+I A KVF+E+P +NVV SWT++I F Q
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
++++R M+ L+ + +TF S+L+AC G AL +G+ H IR + I V
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
A++L+ MYCKC N++ A VF M K++VSW +M+ GY Q+G + A+ F +M K +
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+PD T VISSC + +EEG + GL + + +V L G+ G +E++
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432
Query: 394 FIKQMPIYPNAVIWEA 409
++ + + V W A
Sbjct: 433 LFNEIS-FKDEVTWTA 447
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 34/290 (11%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G PY C N+Y +++++ YSK + + +F+ MP R+ VSW ++I+ +A
Sbjct: 58 GSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYA 117
Query: 213 QEWQVDMCLELYRMM--RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ ++ Y +M + N TF+++L + G + GR H ++ GF SY
Sbjct: 118 GCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSY 177
Query: 271 IQVANSLISMYCK-------------------------------CGNVEEAVYVFNNMHG 299
+ V + L+ MY K CG VE++ +F M
Sbjct: 178 VFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRE 237
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D +SW SMI G+ Q+GL AID+F EM + ++ D TF V+++C ++EGK
Sbjct: 238 RDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQV 297
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + K + S +VD+ + ++ A K+M N V W A
Sbjct: 298 HAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTC-KNVVSWTA 346
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 33/194 (17%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN------------ 286
+ ++L C + + ++ H I+ + + N+LIS Y K G+
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 287 -------------------VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
V E Y+F+ M +D VSWNS+I+GYA GL +++ +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 328 MMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
M+K + ITF ++ G V+ G+ + K G + S +VD+ +
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 386 GLLEEARDFIKQMP 399
G++ AR ++P
Sbjct: 192 GMISCARKVFDELP 205
>gi|326511900|dbj|BAJ95931.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 319
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/298 (51%), Positives = 201/298 (67%), Gaps = 18/298 (6%)
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
QV+ CL+++++MR S+ PND TF +I S CT L G+S H +RMGF + V+N
Sbjct: 3 QVEPCLQVFQLMRQSVCRPNDITFATIFSVCTNHALLALGKSVHGLELRMGFDVCVHVSN 62
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
+LISMY KCGN+ EA +F ++ KD+VSWNSMI GY+QHGL + L +EM ++++ P
Sbjct: 63 ALISMYAKCGNIIEAQSIFESIVCKDLVSWNSMIFGYSQHGLVECCLSLLKEMDEEQIVP 122
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
I+FLG++SSCRH LVEEG+ F++M K G++PELDHYSC+VDLLGRAG L+EA D +
Sbjct: 123 HVISFLGILSSCRHACLVEEGRCCFNTMIKLGIEPELDHYSCMVDLLGRAGFLDEAWDLV 182
Query: 396 KQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWD 438
M PNAVIW A E RL LEP CAATHVQLANLYA + CW
Sbjct: 183 HTMSTPPNAVIWGSLLAACRMHGNIPISIHAVEHRLKLEPGCAATHVQLANLYASIDCWS 242
Query: 439 QAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT-RLSEILPVLDFLVDQMK 495
ARVR +MK+ GLKTN GCSWIEI + VY F AE++ + +++ +L VLD L M+
Sbjct: 243 YVARVRMMMKEGGLKTNTGCSWIEIGSKVYTFTAENRPKSHQVNNVLTVLDCLRSHME 300
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 102/198 (51%), Gaps = 2/198 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D +F +T + C + + G L +R GF V+V ++LI++Y+KC II+A +F
Sbjct: 23 DITF-ATIFSVCTNHALLALGKSVHGLELRMGFDVCVHVSNALISMYAKCGNIIEAQSIF 81
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
E + +++VSW ++I ++Q V+ CL L + M + P+ +F ILS+C + +
Sbjct: 82 ESIVCKDLVSWNSMIFGYSQHGLVECCLSLLKEMDEEQIVPHVISFLGILSSCRHACLVE 141
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGY 312
+GR I++G + + ++ + + G ++EA + + M + V W S++A
Sbjct: 142 EGRCCFNTMIKLGIEPELDHYSCMVDLLGRAGFLDEAWDLVHTMSTPPNAVIWGSLLAAC 201
Query: 313 AQHGLAVRAIDLFEEMMK 330
HG +I E +K
Sbjct: 202 RMHGNIPISIHAVEHRLK 219
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 241/391 (61%), Gaps = 18/391 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+ +D + +T+CG+ + G IRT + NV+VGS+L+ +YSKCR I A
Sbjct: 268 IAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAE 327
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VF M +N++SWTA+I + Q + + ++ M+ ++P+D+T S++S+C
Sbjct: 328 TVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLA 387
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+L +G HC + G YI V+N+L+++Y KCG++E+A +F+ M D VSW ++++
Sbjct: 388 SLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVS 447
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLK 369
GYAQ G A IDLFE+M+ + VKPD +TF+GV+S+C G VE+G+ YF SM K HG+
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIV 507
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAES 412
P DHY+C++DL R+G L+EA +FIKQMP++P+A+ W AAE+
Sbjct: 508 PIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAEN 567
Query: 413 RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
L ++P+ A++V L +++A W++ A++R+ M+D+ +K PGCSWI+ N V+ F A
Sbjct: 568 LLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSA 627
Query: 473 EDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+D+S+ I L++L +M GY P+V
Sbjct: 628 DDQSHPCSKGIYEKLEWLNSKMLEEGYKPDV 658
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 149/303 (49%), Gaps = 32/303 (10%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK--------------- 182
+ST V + + + G + C +R GF AN +VGS L+ +Y+K
Sbjct: 143 MSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVD 202
Query: 183 ----------------CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
C+++ +A ++FE M R+ ++WT ++ F Q LE++R
Sbjct: 203 SKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRR 262
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
MR + + +TF SIL+AC AL QG+ H IR + + V ++L+ MY KC +
Sbjct: 263 MRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRS 322
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A VF M K+I+SW ++I GY Q+G + A+ +F EM + + PD T VISS
Sbjct: 323 IKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISS 382
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
C + +EEG + GL + + +V L G+ G +E+A +M + + V
Sbjct: 383 CANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVS 441
Query: 407 WEA 409
W A
Sbjct: 442 WTA 444
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 125/274 (45%), Gaps = 34/274 (12%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR--M 226
N++ ++L++ + R++ D +F M R++VS+ A+IA F+ + +Y +
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK--- 283
+S + P+ T ++++ A + G G+ HCQ +R+GF + V + L+ MY K
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190
Query: 284 ----------------------------CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
C VEEA +F M +D ++W +M+ G+ Q+
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
GL A+++F M Q + D TF ++++C +E+GK + + +
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVG 310
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S +VD+ + ++ A ++M N + W A
Sbjct: 311 SALVDMYSKCRSIKLAETVFRRMTC-KNIISWTA 343
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 245/407 (60%), Gaps = 19/407 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+E L S+ ++H+E + + + LST + S + + L++++GF +++YV +
Sbjct: 414 DMEAL-SLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 472
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SLI Y KC + DA ++FEE + ++VS+T++I A+AQ Q + L+L+ M++ L+P
Sbjct: 473 SLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKP 532
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ F +S+L+AC A QG+ H ++ GF I NSL++MY KCG++++A F
Sbjct: 533 DRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAF 592
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ + + IVSW++MI G AQHG +A+ LF +M+K+ V P+ IT + V+ +C H GLV
Sbjct: 593 SELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVT 652
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
E K+YF+SM + G KP +HY+C++DLLGRAG + EA + + +MP NA +W
Sbjct: 653 EAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 712
Query: 408 -----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AAE +LEPE + THV LAN+YA W+ A VR+LM+D +K P
Sbjct: 713 ARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEP 772
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
G SWIE+ + VY F D+S+ R EI LD L D M GYVP V
Sbjct: 773 GMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMV 819
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 145/261 (55%), Gaps = 20/261 (7%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
H++H +K + S+ + +C +++R G + + +GF +V+V ++L+ +Y+KC
Sbjct: 146 HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE---LYRMMRNSMLEPNDFTFT 240
+D+ ++F+E+P RNVVSW A+ + + Q D C E L+ M S ++PN+F+ +
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYV---QXDFCGEAVGLFYEMVLSGIKPNEFSLS 262
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S+++ACTG +G+ H I++G+ AN+L+ MY K G++ +A+ VF +
Sbjct: 263 SMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQP 322
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEM--------MKQRVKPDAITFLGVISSCRHGGL 352
DIVSWN++IAG H +A++L +M MK ++ D +G++ L
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDL 382
Query: 353 VEEGKVYFDSMAKHGLKPELD 373
+E+ ++ F+ L PE D
Sbjct: 383 LEDARMAFN------LLPEKD 397
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 122/224 (54%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
++++V L+ +YSKC ++ DA F +P +++++W AII+ ++Q W+ L L+ M
Sbjct: 365 SDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEM 424
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ N T ++IL + G + R H +++ GF S I V NSLI Y KC +V
Sbjct: 425 HKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHV 484
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
E+A +F D+VS+ SMI YAQ+G A+ LF EM +KPD ++++C
Sbjct: 485 EDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 544
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ E+GK + K+G ++ + +V++ + G +++A
Sbjct: 545 ANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 588
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 138/271 (50%), Gaps = 1/271 (0%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S ++ C +T+++R G ++G + + + LI LYSKCR A K+ +E
Sbjct: 60 SKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSE 119
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
++VSW+A+I+ +AQ L + M ++ N+FTF+S+L AC+ L G+
Sbjct: 120 PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV 179
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + GF + VAN+L+ MY KC ++ +F+ + +++VSWN++ + Y Q
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFC 239
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A+ LF EM+ +KP+ + ++++C GK+ + K G + + +
Sbjct: 240 GEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANAL 299
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
VD+ + G L +A +++ P+ V W A
Sbjct: 300 VDMYAKVGDLADAISVFEKIK-QPDIVSWNA 329
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 40/313 (12%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGS 147
S +FD++ + VV L S + +++ +K + LS+ V +C
Sbjct: 211 SKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTG 270
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
R+ G I+ G+ + + ++L+ +Y+K + DA VFE++ ++VSW A+
Sbjct: 271 LRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAV 330
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
IA + LEL M+ R H ++M
Sbjct: 331 IAGCVLHEHHEQALELLGQMK---------------------------RQLHSSLMKMDM 363
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
S + V+ L+ MY KC +E+A FN + KD+++WN++I+GY+Q+ + A+ LF E
Sbjct: 364 ESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVE 423
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M K+ + + T ++ S +V + K G ++ + ++D G+
Sbjct: 424 MHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH 483
Query: 388 LEEARDFIKQMPI 400
+E+A ++ I
Sbjct: 484 VEDAERIFEECTI 496
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+P + + F+++ Q L L + P +++ +LS C + +L G
Sbjct: 19 LPFKPAPKLIQTVPQFSEDPQTTAILNL---IDKGNFTPTSVSYSKLLSQCCTTKSLRPG 75
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
H + G + N LI++Y KC A + + D+VSW+++I+GYAQ+
Sbjct: 76 LQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQN 135
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
GL A+ F EM VK + TF V+ +C
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKAC 167
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 245/407 (60%), Gaps = 19/407 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+E L S+ ++H+E + + + LST + S + + L++++GF +++YV +
Sbjct: 441 DMEAL-SLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 499
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SLI Y KC + DA ++FEE + ++VS+T++I A+AQ Q + L+L+ M++ L+P
Sbjct: 500 SLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKP 559
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ F +S+L+AC A QG+ H ++ GF I NSL++MY KCG++++A F
Sbjct: 560 DRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAF 619
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ + + IVSW++MI G AQHG +A+ LF +M+K+ V P+ IT + V+ +C H GLV
Sbjct: 620 SELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVT 679
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
E K+YF+SM + G KP +HY+C++DLLGRAG + EA + + +MP NA +W
Sbjct: 680 EAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 739
Query: 408 -----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AAE +LEPE + THV LAN+YA W+ A VR+LM+D +K P
Sbjct: 740 ARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEP 799
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
G SWIE+ + VY F D+S+ R EI LD L D M GYVP V
Sbjct: 800 GMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMV 846
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 167/302 (55%), Gaps = 16/302 (5%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
H++H +K + S+ + +C +++R G + + +GF +V+V ++L+ +Y+KC
Sbjct: 146 HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE---LYRMMRNSMLEPNDFTFT 240
+D+ ++F+E+P RNVVSW A+ + + Q+D C E L+ M S ++PN+F+ +
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYV---QIDFCGEAVGLFYEMVLSGIKPNEFSLS 262
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S+++ACTG +G+ H I++G+ AN+L+ MY K G++ +A+ VF +
Sbjct: 263 SMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQP 322
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
DIVSWN++IAG H +A++L +M + + P+ T + +C GL E G+
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLH 382
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVI------WEAA 410
S+ K ++ +L +VD+ + LLE+AR +P I NA+I WE
Sbjct: 383 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 442
Query: 411 ES 412
E+
Sbjct: 443 EA 444
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 132/254 (51%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+A+ +C G ++ ++++V L+ +YSKC ++ DA F +P
Sbjct: 362 LSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP 421
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+++++W AII+ ++Q W+ L L+ M + N T ++IL + G + R
Sbjct: 422 EKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQ 481
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +++ GF S I V NSLI Y KC +VE+A +F D+VS+ SMI YAQ+G
Sbjct: 482 VHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQ 541
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ LF EM +KPD ++++C + E+GK + K+G ++ +
Sbjct: 542 GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS 601
Query: 378 VVDLLGRAGLLEEA 391
+V++ + G +++A
Sbjct: 602 LVNMYAKCGSIDDA 615
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 151/313 (48%), Gaps = 13/313 (4%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGS 147
S +FD++ + VV L S + +++ +K + LS+ V +C
Sbjct: 211 SKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTG 270
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
R+ G I+ G+ + + ++L+ +Y+K + DA VFE++ ++VSW A+
Sbjct: 271 LRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAV 330
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
IA + LEL M+ S + PN FT +S L AC G G GR H ++M
Sbjct: 331 IAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDM 390
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
S + V+ L+ MY KC +E+A FN + KD+++WN++I+GY+Q+ + A+ LF E
Sbjct: 391 ESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVE 450
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M K+ + + T ++ S +V + K G ++ + ++D G+
Sbjct: 451 MHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH 510
Query: 388 LEEARDFIKQMPI 400
+E+A ++ I
Sbjct: 511 VEDAERIFEECTI 523
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 138/271 (50%), Gaps = 1/271 (0%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S ++ C +T+++R G ++G + + + LI LYSKCR A K+ +E
Sbjct: 60 SKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSE 119
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
++VSW+A+I+ +AQ L + M ++ N+FTF+S+L AC+ L G+
Sbjct: 120 PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV 179
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + GF + VAN+L+ MY KC ++ +F+ + +++VSWN++ + Y Q
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFC 239
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A+ LF EM+ +KP+ + ++++C GK+ + K G + + +
Sbjct: 240 GEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANAL 299
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
VD+ + G L +A +++ P+ V W A
Sbjct: 300 VDMYAKVGDLADAISVFEKIK-QPDIVSWNA 329
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+P + + F+Q+ Q L L + P +++ +LS C + +L G
Sbjct: 19 LPFKPAPKLIQTVPQFSQDPQTTAILNL---IDKGNFTPTSVSYSKLLSQCCTTKSLRPG 75
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
H + G + N LI++Y KC N A + + D+VSW+++I+GYAQ+
Sbjct: 76 LQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQN 135
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
GL A+ F EM VK + TF V+ +C
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKAC 167
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/393 (38%), Positives = 239/393 (60%), Gaps = 18/393 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+ + +D + +T+CG+ + G IRT + NV+VGS+L+ +YSKCR I
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKP 325
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A F M +N++SWTA+I + Q + + ++ M+ ++P+DFT S++S+C
Sbjct: 326 AETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCAN 385
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+L +G HC + G YI V+N+L+++Y KCG++E+A +F+ M D VSW ++
Sbjct: 386 LASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTAL 445
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HG 367
+ GYAQ G A IDLFE+M+ + VKPD +TF+GV+S+C G VE+G YF SM K HG
Sbjct: 446 VTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHG 505
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
+ P DHY+C++DL R+G L+EA +FIKQMP++P+A+ W AA
Sbjct: 506 IVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAA 565
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
E+ L ++P+ A++V L +++A W+Q A++R+ M+D+ +K PGCSWI+ N V+ F
Sbjct: 566 ENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIF 625
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
A+D+S+ I L++L +M GY P+V
Sbjct: 626 SADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDV 658
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 155/325 (47%), Gaps = 34/325 (10%)
Query: 118 KLISMHHDLHRERLKVDASFLS-TAVTSCGSTRNIRG-GAPYQCLAIRTGFIANVYVGSS 175
+ + ++H L R V S ++ +A+ S R G + C +R GF N +VGS
Sbjct: 121 RAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSP 180
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVV-------------------------------SW 204
L+ +Y+K +I DA +VF+EM +NVV +W
Sbjct: 181 LVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITW 240
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
T ++ F Q L +R MR + + +TF SIL+AC AL QG+ H IR
Sbjct: 241 TTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIR 300
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
+ + V ++L+ MY KC +++ A F M K+I+SW ++I GY Q+G + A+ +
Sbjct: 301 THYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRV 360
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F EM + + PD T VISSC + +EEG + GL + + +V L G+
Sbjct: 361 FSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGK 420
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G +E+A +M ++ + V W A
Sbjct: 421 CGSIEDAHRLFDEM-LFHDQVSWTA 444
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 34/274 (12%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM- 227
N++ ++L++ + R++ D +F M R+ VS+ A+IA F+ + LY +
Sbjct: 71 NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130
Query: 228 -RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
S + P+ T ++++ A + G GR HCQ +R+GF V + L+ MY K G
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190
Query: 287 VEEAVYVFNNMHGKDIV-------------------------------SWNSMIAGYAQH 315
+ +A VF+ M GK++V +W +M+ G+ Q+
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
GL +A++ F M Q + D TF ++++C +E+GK + + +
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S +VD+ + ++ A ++M N + W A
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSC-KNIISWTA 343
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 164/447 (36%), Positives = 260/447 (58%), Gaps = 32/447 (7%)
Query: 103 NVFDQLLDTPVVDVEKLISMH--HDLHRERLKV-----------DASFLSTAVTSCGSTR 149
+ +L + VV +I+ + HDL E LK+ D S+A+++C +
Sbjct: 471 GILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQ 530
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+ G + +G+ ++ +G++L++LY++C DAY FE++ ++ +SW A+I+
Sbjct: 531 ALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALIS 590
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
FAQ + L+++ M + +E N FTF S +SA + + QG+ H I+ G+ S
Sbjct: 591 GFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDS 650
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ +N LI++Y KCG++E+A F M K++VSWN+MI GY+QHG A+ LFEEM
Sbjct: 651 ETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMK 710
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLL 388
+ + P+ +TF+GV+S+C H GLV EG YF SM+K HGL P+ +HY CVVDLLGRA LL
Sbjct: 711 QLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALL 770
Query: 389 EEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLY 431
AR+FI++MPI P+A+IW AA L LEPE +AT+V L+N+Y
Sbjct: 771 CCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMY 830
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A WD R R++MKD+G+K PG SWIE+ N ++ F D+ + +I +D L
Sbjct: 831 AVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLN 890
Query: 492 DQMKTLGYVPEVHEEKVDDASHKRTEP 518
++ +GYV + + ++D ++ +P
Sbjct: 891 ERAGEIGYVQDRY-NLLNDVEQEQKDP 916
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 142/266 (53%), Gaps = 1/266 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C S + G I++GF NVYV S LI +Y+K + A + + + +VVS
Sbjct: 424 TCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS 483
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA+IA + Q L+L++ M N + ++ F+S +SAC G AL QG+ H Q+
Sbjct: 484 WTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSY 543
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + + N+L+S+Y +CG ++A F + KD +SWN++I+G+AQ G A+
Sbjct: 544 ISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQ 603
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F +M + V+ + TF +S+ + +++GK M K G E + + ++ L
Sbjct: 604 VFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYS 663
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G +E+A+ +MP N V W A
Sbjct: 664 KCGSIEDAKREFFEMP-EKNVVSWNA 688
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 1/304 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + + + + +K D +++ +++C S G I+ G +++ + SL
Sbjct: 296 DRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSL 355
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LY KC I A++ F NVV W ++ A+ Q + ++ M+ L PN
Sbjct: 356 LDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQ 415
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+T+ SIL CT GAL G H Q I+ GF + V + LI MY K G ++ A +
Sbjct: 416 YTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQR 475
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ +D+VSW +MIAGY QH L A+ LF+EM Q ++ D I F IS+C + +G
Sbjct: 476 LREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG 535
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ G +L + +V L R G ++A +++ N + W A S
Sbjct: 536 QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDN-ISWNALISGFAQ 594
Query: 417 EPEC 420
C
Sbjct: 595 SGHC 598
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 15/327 (4%)
Query: 87 KFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCG 146
K D +N +F + + L V L S+ + E + D S ++ + +C
Sbjct: 66 KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSL---MITENVTPDESTFASVLRACS 122
Query: 147 STRNIRGGAPYQCLA------IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
G AP+Q I GF ++ V + LI LYSK + A VFE + +++
Sbjct: 123 G-----GKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKD 177
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
VSW A+I+ +Q + D + L+ M S + P + F+S+LSACT G H
Sbjct: 178 SVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHG 237
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
++ G S V N+L+++Y + GN+ A +F+ MH +D +S+NS+I+G AQ G + R
Sbjct: 238 FIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDR 297
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
A+ LFE+M +KPD +T ++S+C G +GK + K G+ +L ++D
Sbjct: 298 ALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLD 357
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIW 407
L + +E A ++ N V+W
Sbjct: 358 LYVKCFDIETAHEYFLTTET-ENVVLW 383
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 144/284 (50%), Gaps = 1/284 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H+ + S+ +++C + G ++ G + +V ++L+TLYS+
Sbjct: 204 MHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGN 263
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+I A ++F +M R+ +S+ ++I+ AQ D L+L+ M+ ++P+ T S+LSA
Sbjct: 264 LIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSA 323
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C GA +G+ H I+MG S + + SL+ +Y KC ++E A F +++V W
Sbjct: 324 CASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLW 383
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N M+ Y Q G + +F +M + + P+ T+ ++ +C G ++ G+ + K
Sbjct: 384 NVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIK 443
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G + + S ++D+ + G L+ AR ++++ + V W A
Sbjct: 444 SGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTA 486
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 117/238 (49%), Gaps = 1/238 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++GF +GS LI +Y + +A K+F+++P NV W +I+ + L
Sbjct: 37 FKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVL 96
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ-GRSAHCQTIRMGFFSYIQVANSLISM 280
L+ +M + P++ TF S+L AC+G A Q H + I GF S V N LI +
Sbjct: 97 GLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDL 156
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G+V+ A VF + KD VSW +MI+G +Q+G AI LF +M K V P F
Sbjct: 157 YSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVF 216
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
V+S+C L + G+ + K GL E + +V L R G L A +M
Sbjct: 217 SSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM 274
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M + N T+ + C SG+L + H + + GF + + LI +Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
V+ A+ +F+++ ++ WN +I+G LA + + LF M+ + V PD TF V+ +
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 347 CRHG 350
C G
Sbjct: 121 CSGG 124
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/414 (37%), Positives = 248/414 (59%), Gaps = 21/414 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K ++++ D+ ++D L++ +T+ ++ GG + AI+TGF N +VGS LI
Sbjct: 224 KALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLI 283
Query: 178 TLYSKCRV-IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM-CLELYRMMRNSMLEPN 235
+Y+KC + ++ KVFEE+ ++V W +I+ ++Q ++ + LE +R M+ + P+
Sbjct: 284 DMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPD 343
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYVF 294
D +F +SAC+ + QG+ H ++ S I V N+L++MY KCGN+++A +F
Sbjct: 344 DCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLF 403
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M + V+ NS+IAGYAQHG+ +++LFE+M+ + P +IT + ++S+C H G VE
Sbjct: 404 QRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVE 463
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
EGK YF+ M G++PE +HYSC++DLLGRAG L EA I MP P + W
Sbjct: 464 EGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGA 523
Query: 408 -----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
+AA L LEP A ++ LA++Y+ R W++AAR+RKLM+D+G++ P
Sbjct: 524 CRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKP 583
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
GCSWIE+ V+ F AED S+ R+ EI LD + +MK GYVP+V V D
Sbjct: 584 GCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKD 637
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 30/320 (9%)
Query: 103 NVFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSC---- 145
++FDQ+ +V LI+ + D + L +D S +T+C
Sbjct: 95 HLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHV 154
Query: 146 GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM--PVRNVVS 203
G R + LA +GF + V V +SL+T YSK ++ +A VF M VR+ VS
Sbjct: 155 GLIRQLHS------LAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVS 208
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W ++I A+ Q + L LYR M + E + FT S+L+ + L G H + I
Sbjct: 209 WNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAI 268
Query: 264 RMGFFSYIQVANSLISMYCKCG-NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG-LAVRA 321
+ GF V + LI MY KCG + E+ VF + G D+V WN+MI+GY+Q+ L+V A
Sbjct: 269 KTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEA 328
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP--ELDHYSCVV 379
++ F +M + PD +F+ IS+C + +GK F ++A P ++ + +V
Sbjct: 329 LECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGK-QFHALAMKSEIPSNQISVNNALV 387
Query: 380 DLLGRAGLLEEARDFIKQMP 399
+ + G L++AR ++MP
Sbjct: 388 TMYSKCGNLQDARKLFQRMP 407
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 155/312 (49%), Gaps = 20/312 (6%)
Query: 105 FDQLLDTPVVDVEKLISMH-HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIR 163
F Q+L + + + + L H ++ + L +++LS S N+ A + A
Sbjct: 11 FRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHH---AFN 67
Query: 164 TGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLEL 223
NV+ ++LI Y+K +I A+ +F+++P ++VS+ +I A+A L L
Sbjct: 68 QTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSL 127
Query: 224 YRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
+ MR L + FTF+ +++AC +G R H GF SY+ V NSL++ Y K
Sbjct: 128 FGEMREMGLVMDGFTFSGVITACCNH--VGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSK 185
Query: 284 CGNVEEAVYVFNNM--HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
G +EEA VFN M +D VSWNSMI Y QH ++A+ L+ +M+ + + D T
Sbjct: 186 NGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLA 245
Query: 342 GVIS--SCRHGGLVEE--GKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGL-LEEARDFI 395
V++ SC VE+ G + F + A K G S ++D+ + G + E+R
Sbjct: 246 SVLTTFSC-----VEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVF 300
Query: 396 KQMPIYPNAVIW 407
+++ + V+W
Sbjct: 301 EEI-CGSDLVVW 311
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 43/190 (22%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+F IL +C + L G+S H ++ S ++N I +Y KC + A + FN
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 298 HGKDIVSWNSMIAGYAQHGL-------------------------------AVRAIDLFE 326
H ++ S+N++IA YA+ L + A+ LF
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129
Query: 327 EMMKQRVKPDAITFLGVISS-CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL--- 382
EM + + D TF GVI++ C H GL+ + S+A D Y V + L
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLIRQ----LHSLA---FSSGFDSYVSVKNSLLTY 182
Query: 383 -GRAGLLEEA 391
+ G+LEEA
Sbjct: 183 YSKNGILEEA 192
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 232/383 (60%), Gaps = 17/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ + + G+ + G +++ G+ NV+VGSSL+ +Y++ + +A +F +
Sbjct: 209 LSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+NVVSW A+IA A++ + + + L+ M EP FT++S+ +AC SG+L QG+
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKW 328
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ G + N+LI MY K G++++A VF + +DIVSWNS+I+GYAQHGL
Sbjct: 329 VHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGL 388
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ LFE+M+K +V+P+ ITFL V+++C H GL++EG+ YF+ M KH ++ ++ H+
Sbjct: 389 GAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVT 448
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPEC 420
VVDLLGRAG L EA FI++MPI P A +W AAE L+P
Sbjct: 449 VVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHD 508
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+ HV L+N+YA AA+VRK+MK+ G+K P CSW+EI N V+ F A D S+
Sbjct: 509 SGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMR 568
Query: 481 SEILPVLDFLVDQMKTLGYVPEV 503
EI + + + ++K +GYVP+
Sbjct: 569 EEIQRMWEKISGKIKEIGYVPDT 591
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 158/291 (54%), Gaps = 4/291 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ + + S + C R ++ G + F ++ + + ++ +Y+KC + +A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F++MP +++VSWT +I+ ++Q Q L L+ M + +PN+FT +S+L A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ GR H +++ G+ + V +SL+ MY + ++ EA +FN++ K++VSWN++IA
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G+A+ G + LF +M++Q +P T+ V ++C G +E+GK + K G +P
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340
Query: 371 ELDHYSCVVDLLGRAGLLEEA----RDFIKQMPIYPNAVIWEAAESRLLLE 417
+ ++D+ ++G +++A R +KQ + N++I A+ L E
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 391
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 240/394 (60%), Gaps = 17/394 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L +E +K ++S ++ + C S+ ++ G L ++ G ++++V ++L++++ C
Sbjct: 505 LLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGD 564
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
++ A +F +MP R++VSW IIA F Q + + + ++MM+ S ++P+ TFT +L+A
Sbjct: 565 LMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNA 624
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C AL +GR H F + V LISMY KCG++E+A VF+ + K++ SW
Sbjct: 625 CASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSW 684
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
SMIAGYAQHG A++LF +M ++ VKPD ITF+G +S+C H GL+EEG +F SM +
Sbjct: 685 TSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE 744
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------E 408
++P ++HY C+VDL GRAGLL EA +FI +M + P++ +W +
Sbjct: 745 FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEK 804
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AA+ +L L+P V L+N+YA W + A++RK+M D+G+ PG SWIE+ V+
Sbjct: 805 AAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVH 864
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
F ++DK++ + EI L+ L +M+ LGYVP+
Sbjct: 865 TFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPD 898
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 165/293 (56%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ +H + ++ +K D + + +C RN+ G L ++ G+ +++VG++L
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I ++ KC I DA KVF+ +P R++V+WT++I A+ + L++ M ++P+
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F S+L AC AL QG+ H + +G+ + I V +++SMY KCG++E+A+ VF+
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ G+++VSW +MIAG+AQHG A F +M++ ++P+ +TF+ ++ +C ++ G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ D + + G + + ++ + + G L++A +++ N V W A
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNA 484
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 150/274 (54%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E ++ D + + +C + G G+ +YVG++++++Y+KC
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGS 362
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA +VF+ + RNVVSWTA+IA FAQ ++D + M S +EPN TF SIL A
Sbjct: 363 MEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGA 422
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C+ AL +G+ I G+ S +V +L+SMY KCG++++A VF + +++V+W
Sbjct: 423 CSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAW 482
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI Y QH A+ F+ ++K+ +KP++ TF +++ C+ +E GK + K
Sbjct: 483 NAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMK 542
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
GL+ +L + +V + G L A++ MP
Sbjct: 543 AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 154/264 (58%), Gaps = 1/264 (0%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+F+S + +C S ++ G Q I G+ ++ V ++L+++Y+KC + DA++VFE+
Sbjct: 415 TFMSI-LGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ +NVV+W A+I A+ Q Q D L ++ + ++PN TFTSIL+ C S +L G
Sbjct: 474 ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H ++ G S + V+N+L+SM+ CG++ A +FN+M +D+VSWN++IAG+ QH
Sbjct: 534 KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQH 593
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G A D F+ M + +KPD ITF G++++C + EG+ + + ++
Sbjct: 594 GKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG 653
Query: 376 SCVVDLLGRAGLLEEARDFIKQMP 399
+ ++ + + G +E+A ++P
Sbjct: 654 TGLISMYTKCGSIEDAHQVFHKLP 677
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 160/297 (53%), Gaps = 14/297 (4%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E++ S H ++R+ S + C +N+ G ++G ++++ ++
Sbjct: 98 LERVDSSHIQIYRQTY-------SALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNT 150
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y+KC I A ++F++M ++V SW ++ + Q + +L+ M ++P+
Sbjct: 151 LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF S+L+AC + + +GR + ++ G+ + + V +LI+M+ KCG++ +A VF+
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
N+ +D+V+W SMI G A+HG +A +LF+ M ++ V+PD + F+ ++ +C H +E+
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYPNAVIWEA 409
GK M + G E+ + ++ + + G +E+A D +K N V W A
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR----NVVSWTA 383
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 107/202 (52%)
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+++ A++ ++ Q + +++ + +S ++ T++++L C LG G
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+ + G I + N+LI+MY KCGN A +F++M KD+ SWN ++ GY QHGL
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A L E+M++ VKPD TF+ ++++C V++G+ ++ + K G +L +
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 378 VVDLLGRAGLLEEARDFIKQMP 399
++++ + G + +A +P
Sbjct: 252 LINMHIKCGDIGDATKVFDNLP 273
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 254/441 (57%), Gaps = 30/441 (6%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLIS--MHHD-----------LHRERLKVDASFL 138
+ S + NVF+++ VV +I+ + H+ L +E +K D+S
Sbjct: 452 YAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTF 511
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ + C S + G Q L IR GF +++++ ++L++++ C ++ A +F +MP
Sbjct: 512 TSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPE 571
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R++VSW IIA F Q + + ++MM+ S ++P+ TFT +L+AC AL +GR
Sbjct: 572 RDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRL 631
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + V LISMY KCG++++A VF+N+ K++ SW SMI GYAQHG
Sbjct: 632 HALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRG 691
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A++LF +M ++ VKPD ITF+G +S+C H GL++EG +F+SM ++P ++HY C+
Sbjct: 692 KEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCM 751
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECA 421
VDL GRAGLL EA +FI +M + P++ +W A A+ +L L+P
Sbjct: 752 VDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDD 811
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
+V L+N+YA W + ++RK+M D+G+ PG SWIE+ V+ F ++DK++ ++
Sbjct: 812 GVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIE 871
Query: 482 EILPVLDFLVDQMKTLGYVPE 502
EI L L +MK LGYVP+
Sbjct: 872 EIHAELGRLHMEMKKLGYVPD 892
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 175/331 (52%), Gaps = 14/331 (4%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVD-------------VEKLISMHHDLHRERLKVDASFL 138
+ +T + +FD++ D V E+ +H + ++ +K D
Sbjct: 149 YAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTF 208
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ +C +N+ G L + G+ +++VG++LI ++ KC + DA KVF +P
Sbjct: 209 VYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPR 268
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R++++WT++I A+ Q L+++M ++P+ F S+L AC AL QG+
Sbjct: 269 RDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRV 328
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + +G + I V +L+SMY KCG++E+A+ VFN + G+++VSW +MIAG+AQHG
Sbjct: 329 HARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRM 388
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A F +M++ ++P+ +TF+ ++ +C +++G+ D + K G + + +
Sbjct: 389 EEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTAL 448
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + + G L +AR+ +++ N V W A
Sbjct: 449 LSMYAKCGSLMDARNVFERIS-KQNVVAWNA 478
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 148/274 (54%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E ++ D + + +C + G G +YVG++L+++Y+KC
Sbjct: 297 MEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGS 356
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA +VF + RNVVSWTA+IA FAQ +++ + M S +EPN TF SIL A
Sbjct: 357 MEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGA 416
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C+ AL QGR H + I+ G+ + +V +L+SMY KCG++ +A VF + +++V+W
Sbjct: 417 CSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAW 476
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI Y QH A+ F+ ++K+ +KPD+ TF +++ C+ +E GK + +
Sbjct: 477 NAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIR 536
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G + +L + +V + G L A + MP
Sbjct: 537 AGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP 570
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 150/264 (56%), Gaps = 1/264 (0%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+F+S + +C ++ G I+ G+I + V ++L+++Y+KC ++DA VFE
Sbjct: 409 TFMSI-LGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFER 467
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ +NVV+W A+I A+ Q + D + ++ + ++P+ TFTSIL+ C AL G
Sbjct: 468 ISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG 527
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ IR GF S + + N+L+SM+ CG++ A+ +FN+M +D+VSWN++IAG+ QH
Sbjct: 528 KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQH 587
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G A D F+ M + VKPD ITF G++++C + EG+ + + L ++
Sbjct: 588 GENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVG 647
Query: 376 SCVVDLLGRAGLLEEARDFIKQMP 399
+ ++ + + G +++A +P
Sbjct: 648 TGLISMYTKCGSIDDAHLVFHNLP 671
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 245/439 (55%), Gaps = 55/439 (12%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG-FIANVYVGSSLITLYSKCRVIIDA 189
L+ D L++ V++C S ++ G ++T F ++ +G++L+ +Y+KC + +A
Sbjct: 244 LEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEA 303
Query: 190 YKVFEEMPVRNVVS-------------------------------WTAIIAAFAQEWQVD 218
+VF+ M +RNVVS W A+IA + Q + +
Sbjct: 304 RRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENE 363
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF------SYIQ 272
L L+R+++ + P +TF ++LSAC L GR AH ++ GF S I
Sbjct: 364 EALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIF 423
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V NSLI MY KCG++E+ VF M +D VSWN++I GYAQ+G A+ +F +M+
Sbjct: 424 VGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCG 483
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
KPD +T +GV+ +C H GLVEEG+ YF SM +HGL P DHY+C+VDLLGRAG L EA+
Sbjct: 484 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAK 543
Query: 393 DFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVR 435
+ I+ MP+ P+AV+W AAE L ++P + +V L+N+YA +
Sbjct: 544 NLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELG 603
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W RVRKLM+ +G+ PGCSWIE+ + V+ F +DKS+ +I VL L +QMK
Sbjct: 604 RWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMK 663
Query: 496 TLGYVPEVHEEKVDDASHK 514
+GY+P+ ++ + D K
Sbjct: 664 RVGYIPDANDFEAYDEQSK 682
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 156/322 (48%), Gaps = 39/322 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+HRE ++ +A+++C ++ G L ++ + +VY+GS+LI +YSKC
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A +VF M RN+V+W ++I + Q LE++ M +S LEP++ T S++SA
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSA 257
Query: 246 CTGSGALGQGRSAHCQTIRMG-FFSYIQVANSLISMYCKCGNVEE--------------- 289
C AL +G H + ++ F + + N+L+ MY KC V E
Sbjct: 258 CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVS 317
Query: 290 ----------------AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
A ++F+ M +++VSWN++IAGY Q+G A+ LF + ++ +
Sbjct: 318 ETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESI 377
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK----PELDHY--SCVVDLLGRAGL 387
P TF ++S+C + + G+ + K G + E D + + ++D+ + G
Sbjct: 378 WPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGS 437
Query: 388 LEEARDFIKQMPIYPNAVIWEA 409
+E+ ++M + V W A
Sbjct: 438 IEDGSRVFEKMK-ERDCVSWNA 458
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 32/309 (10%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
H L R+ ++S + + SC +R+ RG + T F +++ + LI +Y KC
Sbjct: 4 HGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKC 63
Query: 184 RVIIDAYKVFEEMPVRNVV-------------------------------SWTAIIAAFA 212
+ DA K+F+ MP RN SW ++++ FA
Sbjct: 64 DCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFA 123
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
Q + + LE + M N+++F S LSAC G L G H + + + +
Sbjct: 124 QHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVY 183
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
+ ++LI MY KCG+V A VF+ M +++V+WNS+I Y Q+G A A+++F MM
Sbjct: 184 MGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSG 243
Query: 333 VKPDAITFLGVISSCRHGGLVEEG-KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
++PD +T V+S+C ++EG +++ + + + +L + +VD+ + + EA
Sbjct: 244 LEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEA 303
Query: 392 RDFIKQMPI 400
R +M I
Sbjct: 304 RRVFDRMSI 312
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 162/432 (37%), Positives = 247/432 (57%), Gaps = 26/432 (6%)
Query: 89 NHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGST 148
N D N+ G L+D+ +E+ M H + +E + D +++C
Sbjct: 309 NRDVIAWNTMIGG------LVDSG--QLEEAHGMFHRMLKECVAPDRVTYLAILSACARP 360
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+ G A++ G +++V G++LI +YSK + DA +VF+ MP R+VVSWTA++
Sbjct: 361 GGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALV 420
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+A QV ++ M +E N T+ +L AC+ AL G+ H + ++ G F
Sbjct: 421 GGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIF 480
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
+ + VAN+L+SMY KCG+VE+A+ V M +D+V+WN++I G AQ+G + A+ FE M
Sbjct: 481 ADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVM 540
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGL 387
+ ++P+A TF+ V+S+CR LVEEG+ F SM K +G+ P HY+C+VD+L RAG
Sbjct: 541 KSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGH 600
Query: 388 LEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANL 430
L EA D I MP P+A +W +AAE L LEP+ A T+V L+ +
Sbjct: 601 LGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFI 660
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
YA W A++RKLMK++G+K PG SWIE+ V+ F A D+S+ R EI L+ L
Sbjct: 661 YAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEAL 720
Query: 491 VDQMKTLGYVPE 502
Q+K+LGYVP+
Sbjct: 721 TKQIKSLGYVPD 732
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 150/284 (52%), Gaps = 1/284 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ +E L+ D + +++C S + G + G N VG++LI++Y+KC
Sbjct: 136 MQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGS 195
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA +VF+ M R+ VSWT + A+A+ L+ Y M + P+ T+ ++LSA
Sbjct: 196 VRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSA 255
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C AL +G+ H Q + S ++V+ +L MY KCG V++A VF + +D+++W
Sbjct: 256 CGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAW 315
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI G G A +F M+K+ V PD +T+L ++S+C G + GK K
Sbjct: 316 NTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVK 375
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GL ++ + ++++ +AG +++AR +MP + V W A
Sbjct: 376 DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTA 418
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 149/274 (54%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
LH++ +VD+ + SC +++ G +R G NVY+ ++L+ LY C
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ +A ++F++ ++VVSW +I+ +A L+ +M+ LEP+ FTF SILSA
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C+ AL GR H + + G + V N+LISMY KCG+V +A VF+ M +D VSW
Sbjct: 155 CSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 214
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
++ YA+ G A ++ + M+++ V+P IT++ V+S+C +E+GK + +
Sbjct: 215 TTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVE 274
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++ + + + + G +++AR+ + +P
Sbjct: 275 SEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP 308
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 147/272 (54%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ +H + +E ++ +++CGS + G + + ++V V ++L +
Sbjct: 231 LKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKM 290
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + DA +VFE +P R+V++W +I Q++ ++ M + P+ T+
Sbjct: 291 YIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTY 350
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+ILSAC G L G+ H + ++ G S ++ N+LI+MY K G++++A VF+ M
Sbjct: 351 LAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPK 410
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+VSW +++ GYA G V + F++M++Q V+ + IT++ V+ +C + ++ GK
Sbjct: 411 RDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEI 470
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ K G+ +L + ++ + + G +E+A
Sbjct: 471 HAEVVKAGIFADLAVANALMSMYFKCGSVEDA 502
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/421 (38%), Positives = 249/421 (59%), Gaps = 21/421 (4%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + ++ R L VD L++ +T+ ++ GG + I+TGF N +VGS LI
Sbjct: 223 KALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLI 282
Query: 178 TLYSKCRV-IIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPN 235
LYSKC + D KVFEE+ ++V W +++ ++Q E ++ LE +R M+ PN
Sbjct: 283 DLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPN 342
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYVF 294
D +F ++SAC+ + QG+ H ++ S I V N+LI+MY KCGN+++A +F
Sbjct: 343 DCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLF 402
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M + VS NSMIAGYAQHG+ + ++ LF+ M+++++ P +ITF+ V+S+C H G VE
Sbjct: 403 DRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVE 462
Query: 355 EGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
EG YF+ M K ++PE +HYSC++DLLGRAG L EA + I +MP P ++ W
Sbjct: 463 EGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGA 522
Query: 408 -----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
+AA L LEP AA +V L+N+YA W++ A VRK M+D+G+K P
Sbjct: 523 CRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKP 582
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
GCSWIE+ ++ F AED S+ + EI L+ + +MK GYVP+V V D +
Sbjct: 583 GCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGG 642
Query: 517 E 517
E
Sbjct: 643 E 643
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 153/316 (48%), Gaps = 27/316 (8%)
Query: 104 VFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGSTRN 150
+FDQ+ + +V LIS + D + L +D LS +T+C
Sbjct: 96 LFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVG 155
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIA 209
+ G +A+ +GF + V V ++L+T Y K + DA +VF M +R+ VSW ++I
Sbjct: 156 LIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIV 213
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
A+ Q + L L++ M L + FT S+L+A T L G H Q I+ GF
Sbjct: 214 AYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQ 273
Query: 270 YIQVANSLISMYCKC-GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR-AIDLFEE 327
V + LI +Y KC G + + VF + D+V WN+M++GY+Q+ + A++ F +
Sbjct: 274 NSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQ 333
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD-----LL 382
M +P+ +F+ VIS+C + +GK S+A LK ++ VD +
Sbjct: 334 MQGIGYRPNDCSFVCVISACSNLSSPSQGK-QIHSLA---LKSDIPSNRISVDNALIAMY 389
Query: 383 GRAGLLEEARDFIKQM 398
+ G L++AR +M
Sbjct: 390 SKCGNLQDARRLFDRM 405
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 142/300 (47%), Gaps = 38/300 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C + R++ G L I++ + Y + I LYSKC + A K F+++ NV
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 202 VSWTAIIAAFAQE-------------------------------WQVDMCLELYRMMRNS 230
S+ AIIAA+A+E + L L+ MR
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134
Query: 231 MLEPNDFTFTSILSACTGS-GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
L+ + FT +++++AC G +GQ H + GF SY+ V N+L++ Y K G++++
Sbjct: 135 GLDMDGFTLSAVITACCDDVGLIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 290 AVYVFNNMHG-KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A VF M G +D VSWNSMI Y QH +A+ LF+EM+++ + D T V+++
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR-AGLLEEARDFIKQMPIYPNAVIW 407
+ G + + K G S ++DL + G + + R +++ P+ V+W
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEI-TEPDLVLW 310
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F +L C L G+S H I+ +N I +Y KCG + A F ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
++ S+N++IA YA+ + A LF+++ +PD +++ +IS+ G
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQI----PEPDLVSYNTLISAYADCGETAPALG 126
Query: 359 YFDSMAKHGL 368
F M + GL
Sbjct: 127 LFSGMREMGL 136
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/421 (38%), Positives = 249/421 (59%), Gaps = 21/421 (4%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + ++ R L VD L++ +T+ ++ GG + I+TGF N +VGS LI
Sbjct: 223 KALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLI 282
Query: 178 TLYSKCRV-IIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPN 235
LYSKC + D KVFEE+ ++V W +++ ++Q E ++ LE +R M+ PN
Sbjct: 283 DLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPN 342
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYVF 294
D +F ++SAC+ + QG+ H ++ S I V N+LI+MY KCGN+++A +F
Sbjct: 343 DCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLF 402
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M + VS NSMIAGYAQHG+ + ++ LF+ M+++++ P +ITF+ V+S+C H G VE
Sbjct: 403 DRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVE 462
Query: 355 EGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
EG YF+ M K ++PE +HYSC++DLLGRAG L EA + I +MP P ++ W
Sbjct: 463 EGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGA 522
Query: 408 -----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
+AA L LEP AA +V L+N+YA W++ A VRK M+D+G+K P
Sbjct: 523 CRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKP 582
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
GCSWIE+ ++ F AED S+ + EI L+ + +MK GYVP+V V D +
Sbjct: 583 GCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGG 642
Query: 517 E 517
E
Sbjct: 643 E 643
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 153/316 (48%), Gaps = 27/316 (8%)
Query: 104 VFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGSTRN 150
+FDQ+ + +V LIS + D + L +D LS +T+C
Sbjct: 96 LFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVG 155
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIA 209
+ G +A+ +GF + V V ++L+T Y K + DA +VF M +R+ VSW ++I
Sbjct: 156 LIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIV 213
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
A+ Q + L L++ M L + FT S+L+A T L G H Q I+ GF
Sbjct: 214 AYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQ 273
Query: 270 YIQVANSLISMYCKC-GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR-AIDLFEE 327
V + LI +Y KC G + + VF + D+V WN+M++GY+Q+ + A++ F +
Sbjct: 274 NSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQ 333
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD-----LL 382
M +P+ +F+ VIS+C + +GK S+A LK ++ VD +
Sbjct: 334 MQGIGYRPNDCSFVCVISACSNLSSPSQGK-QIHSLA---LKSDIPSNRISVDNALIAMY 389
Query: 383 GRAGLLEEARDFIKQM 398
+ G L++AR +M
Sbjct: 390 SKCGNLQDARRLFDRM 405
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 142/300 (47%), Gaps = 38/300 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C + R++ G L I++ + Y + I LYSKC + A K F+++ NV
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 202 VSWTAIIAAFAQE-------------------------------WQVDMCLELYRMMRNS 230
S+ AIIAA+A+E + L L+ MR
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134
Query: 231 MLEPNDFTFTSILSACTGS-GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
L+ + FT +++++AC G +GQ H + GF SY+ V N+L++ Y K G++++
Sbjct: 135 GLDMDXFTLSAVITACCDDVGLIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 290 AVYVFNNMHG-KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A VF M G +D VSWNSMI Y QH +A+ LF+EM+++ + D T V+++
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR-AGLLEEARDFIKQMPIYPNAVIW 407
+ G + + K G S ++DL + G + + R +++ P+ V+W
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEI-TEPDLVLW 310
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F +L C L G+S H I+ +N I +Y KCG + A F ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
++ S+N++IA YA+ + A LF+++ +PD +++ +IS+ G
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQI----PEPDLVSYNTLISAYADCGETAPALG 126
Query: 359 YFDSMAKHGLKPELDHYSCVV 379
F M + GL + S V+
Sbjct: 127 LFSGMREMGLDMDXFTLSAVI 147
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 233/393 (59%), Gaps = 18/393 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + +D + +T+CG+ + G RT + NV+VGS+L+ +YSKCR I
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF M RN++SWTA+I + Q + + + M+ ++P+DFT S++S+C
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+L +G HC + G YI V+N+L+++Y KCG++E+A +F+ M D VSW ++
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HG 367
+ GYAQ G A IDLFE+M+ +KPD +TF+GV+S+C GLVE+G YFDSM K HG
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHG 511
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
+ P DHY+C++DL R+G +EA +FIKQMP P+A W AA
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAA 571
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
E+ L +P+ A++V L +++A W + A +R+ M+D+ +K PGCSWI+ N V+ F
Sbjct: 572 ENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIF 631
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
A+D+S+ S I L++L +M GY P+V
Sbjct: 632 SADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDV 664
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 181/411 (44%), Gaps = 52/411 (12%)
Query: 36 LKQISSSKSLHKALRVLD-IISPR--TRDSTKTEV-HLRLIQDF--LQTDSKHLDSQKFN 89
L + S L +A RV D + P TR++ + + H RL+ D L D+ +N
Sbjct: 55 LTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYN 114
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTR 149
TG +ST +P V+ ++ L E ++ LS + +
Sbjct: 115 ALITGFSST-----------GSPARSVQLYRAL---LREESVRPTRITLSAMIMVASALS 160
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV------- 202
+ G C +R GF A +VGS L+ +Y+K +I DA +VF+EM + VV
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 203 ------------------------SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+WT ++ Q L+++R MR + + +T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F SIL+AC AL +G+ H R + + V ++L+ MY KC ++ A VF M
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
++I+SW +MI GY Q+ + A+ F EM +KPD T VISSC + +EEG
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ GL + + +V L G+ G +E+A +M + + V W A
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTA 450
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 5/174 (2%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
+++ + P F +L+A SG L + R + F+ N+L+S
Sbjct: 38 ILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR----NALLSALAHSR 93
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVI 344
V + +F +M +D VS+N++I G++ G R++ L+ ++++ V+P IT +I
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G + + G S +VD+ + GL+ +AR ++M
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 233/393 (59%), Gaps = 18/393 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + +D + +T+CG+ + G RT + NV+VGS+L+ +YSKCR I
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF M RN++SWTA+I + Q + + + M+ ++P+DFT S++S+C
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+L +G HC + G YI V+N+L+++Y KCG++E+A +F+ M D VSW ++
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HG 367
+ GYAQ G A IDLFE+M+ +KPD +TF+GV+S+C GLVE+G YFDSM K HG
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHG 511
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
+ P DHY+C++DL R+G +EA +FIKQMP P+A W AA
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAA 571
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
E+ L +P+ A++V L +++A W + A +R+ M+D+ +K PGCSWI+ N V+ F
Sbjct: 572 ENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIF 631
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
A+D+S+ S I L++L +M GY P+V
Sbjct: 632 SADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDV 664
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 181/411 (44%), Gaps = 52/411 (12%)
Query: 36 LKQISSSKSLHKALRVLD-IISPR--TRDSTKTEV-HLRLIQDF--LQTDSKHLDSQKFN 89
L + S L +A RV D + P TR++ + + H RL+ D L D+ +N
Sbjct: 55 LTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYN 114
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTR 149
TG +ST +P V+ ++ L E ++ LS + +
Sbjct: 115 ALITGFSST-----------GSPARSVQLYRAL---LREESVRPTRITLSAMIMVASALS 160
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV------- 202
+ G C +R GF A +VGS L+ +Y+K +I DA +VF+EM + VV
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 203 ------------------------SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+WT ++ Q L+++R MR + + +T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F SIL+AC AL +G+ H R + + V ++L+ MY KC ++ A VF M
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
++I+SW +MI GY Q+ + A+ F EM +KPD T VISSC + +EEG
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ GL + + +V L G+ G +E+A +M + + V W A
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTA 450
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 5/174 (2%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
+++ + P F +L+A SG L + R + F+ N+L+S
Sbjct: 38 ILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR----NALLSALAHSR 93
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVI 344
V + +F +M +D VS+N++I G++ G R++ L+ ++++ V+P IT +I
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G + + G S +VD+ + GL+ +AR ++M
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 239/394 (60%), Gaps = 17/394 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L +E +K ++S ++ + C S+ ++ G L ++ G ++++V ++L++++ C
Sbjct: 505 LLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGD 564
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
++ A +F +MP R++VSW IIA F Q + + + ++MM+ S ++P+ TFT +L+A
Sbjct: 565 LMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNA 624
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C AL +GR H F + V LISMY KCG++E+A VF+ + K++ SW
Sbjct: 625 CASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSW 684
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
SMI GYAQHG A++LF +M ++ VKPD ITF+G +S+C H GL+EEG +F SM +
Sbjct: 685 TSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE 744
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------E 408
++P ++HY C+VDL GRAGLL EA +FI +M + P++ +W +
Sbjct: 745 FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEK 804
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AA+ +L L+P V L+N+YA W + A++RK+M D+G+ PG SWIE+ V+
Sbjct: 805 AAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVH 864
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
F ++DK++ + EI L+ L +M+ LGYVP+
Sbjct: 865 TFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPD 898
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 165/293 (56%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ +H + ++ +K D + + +C RN+ G L ++ G+ +++VG++L
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I ++ KC I DA KVF+ +P R++V+WT++I A+ + L++ M ++P+
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F S+L AC AL QG+ H + +G+ + I V +++SMY KCG++E+A+ VF+
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ G+++VSW +MIAG+AQHG A F +M++ ++P+ +TF+ ++ +C ++ G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ D + + G + + ++ + + G L++A +++ N V W A
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNA 484
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 150/274 (54%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E ++ D + + +C + G G+ +YVG++++++Y+KC
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGS 362
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA +VF+ + RNVVSWTA+IA FAQ ++D + M S +EPN TF SIL A
Sbjct: 363 MEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGA 422
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C+ AL +G+ I G+ S +V +L+SMY KCG++++A VF + +++V+W
Sbjct: 423 CSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAW 482
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI Y QH A+ F+ ++K+ +KP++ TF +++ C+ +E GK + K
Sbjct: 483 NAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMK 542
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
GL+ +L + +V + G L A++ MP
Sbjct: 543 AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 154/264 (58%), Gaps = 1/264 (0%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+F+S + +C S ++ G Q I G+ ++ V ++L+++Y+KC + DA++VFE+
Sbjct: 415 TFMSI-LGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ +NVV+W A+I A+ Q Q D L ++ + ++PN TFTSIL+ C S +L G
Sbjct: 474 ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG 533
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H ++ G S + V+N+L+SM+ CG++ A +FN+M +D+VSWN++IAG+ QH
Sbjct: 534 KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQH 593
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G A D F+ M + +KPD ITF G++++C + EG+ + + ++
Sbjct: 594 GKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG 653
Query: 376 SCVVDLLGRAGLLEEARDFIKQMP 399
+ ++ + + G +E+A ++P
Sbjct: 654 TGLISMYTKCGSIEDAHQVFHKLP 677
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 160/297 (53%), Gaps = 14/297 (4%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E++ S H ++R+ S + C +N+ G ++G ++++ ++
Sbjct: 98 LERVDSSHIQIYRQTY-------SALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNT 150
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y+KC I A ++F++M ++V SW ++ + Q + +L+ M ++P+
Sbjct: 151 LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF S+L+AC + + +GR + ++ G+ + + V +LI+M+ KCG++ +A VF+
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
N+ +D+V+W SMI G A+HG +A +LF+ M ++ V+PD + F+ ++ +C H +E+
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYPNAVIWEA 409
GK M + G E+ + ++ + + G +E+A D +K N V W A
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR----NVVSWTA 383
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 107/202 (52%)
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+++ A++ ++ Q + +++ + +S ++ T++++L C LG G
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+ + G I + N+LI+MY KCGN A +F++M KD+ SWN ++ GY QHGL
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A L E+M++ VKPD TF+ ++++C V++G+ ++ + K G +L +
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 378 VVDLLGRAGLLEEARDFIKQMP 399
++++ + G + +A +P
Sbjct: 252 LINMHIKCGDIGDATKVFDNLP 273
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/383 (39%), Positives = 232/383 (60%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ + + G+ + G +++ G+ NV+VGSSL+ +Y++ + +A +F +
Sbjct: 209 LSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+NVVSW A+IA A++ + + + L+ M EP FT++S+L AC SG+L QG+
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKW 327
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ G + N+LI MY K G++++A VF + +DIVSWNS+I+GYAQHGL
Sbjct: 328 VHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGL 387
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ LFE+M+K +V+P+ ITFL V+++C H GL++EG+ YF+ M KH ++ ++ H+
Sbjct: 388 GAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVT 447
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPEC 420
VVDLLGRAG L EA FI++MPI P A +W AAE L+P
Sbjct: 448 VVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHD 507
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+ HV L+N+YA AA+VRK+MK+ G+K P CSW+EI N V+ F A D S+
Sbjct: 508 SGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMR 567
Query: 481 SEILPVLDFLVDQMKTLGYVPEV 503
EI + + + ++K +GYVP+
Sbjct: 568 EEIQRMWEKISGKIKEIGYVPDT 590
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 158/291 (54%), Gaps = 5/291 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ + + S + C R ++ G + F ++ + + ++ +Y+KC + +A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F++MP +++VSWT +I+ ++Q Q L L+ M + +PN+FT +S+L A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ GR H +++ G+ + V +SL+ MY + ++ EA +FN++ K++VSWN++IA
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G+A+ G + LF +M++Q +P T+ V+ +C G +E+GK + K G +P
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQP 339
Query: 371 ELDHYSCVVDLLGRAGLLEEA----RDFIKQMPIYPNAVIWEAAESRLLLE 417
+ ++D+ ++G +++A R +KQ + N++I A+ L E
Sbjct: 340 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 390
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 72/120 (60%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
F ++V +C S+ ++ G I++G Y+G++LI +Y+K I DA KVF +
Sbjct: 308 FTYSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL 367
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+++VSW +II+ +AQ L+L+ M + ++PN+ TF S+L+AC+ SG L +G+
Sbjct: 368 VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 427
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 262/466 (56%), Gaps = 44/466 (9%)
Query: 82 HLDSQKFNHDFTGTNSTF------GS----SNVFDQLLDTPVVDVEKLISMHH------- 124
HL + KF +D NS GS VFD++ VV +I+ +
Sbjct: 116 HLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASS 175
Query: 125 ---------DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
++ R+ L+ + LS+ V CG + G + GF NV+VGSS
Sbjct: 176 ATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSS 235
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
L+ +Y++C + ++ VF+E+ +N VSW A+I+ FA++ + + L L+ M+
Sbjct: 236 LVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGAT 295
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+FT++++L + + +G+L QG+ H ++ G V N+L+ MY K GN+ +A VF+
Sbjct: 296 EFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFD 355
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVE 354
+ D+VS NSM+ GYAQHGL A++LFEEMM ++P+ ITFL V+++C H GL++
Sbjct: 356 RLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLD 415
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
EG YF+ M K+GL+P+L HY+ VVDL GRAGLL++A+ FI++MPI PNA IW
Sbjct: 416 EGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGAS 475
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AA+ L L+P H L+N+YA W A+VRK MKD GLK P
Sbjct: 476 KMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPA 535
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
CSW+EI N V+ F A D S+ + +++ + + L ++K +GYVP+
Sbjct: 536 CSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDT 581
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 126/242 (52%), Gaps = 3/242 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ D + + + C ++ G + + F ++ + +S++ +Y+KC + A
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEW---QVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+VF+EM V++VV+WT++I ++Q+ L L+ M L PN+F +S++ C
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G+ G+ H + GF + V +SL+ MY +CG + E+ VF+ + K+ VSWN+
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNA 266
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
+I+G+A+ G A+ LF +M ++ T+ ++ S G +E+GK M K G
Sbjct: 267 LISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSG 326
Query: 368 LK 369
K
Sbjct: 327 KK 328
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L + ++ N LEP+ + +L CT G L QG+ H + F + + + NS++ M
Sbjct: 76 LHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFM 135
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL---AVRAIDLFEEMMKQRVKPDA 337
Y KCG++E A VF+ M KD+V+W SMI GY+Q G A A+ LF EM++ ++P+
Sbjct: 136 YAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNE 195
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
++ C G +GK K+G + + S +VD+ R G L E+R +
Sbjct: 196 FALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDE 255
Query: 398 MPIYPNAVIWEA 409
+ N V W A
Sbjct: 256 LE-SKNEVSWNA 266
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 151/382 (39%), Positives = 233/382 (60%), Gaps = 18/382 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L A + GST ++ G L +R G+ +NVYV +++ +Y++C + +A +F+ M
Sbjct: 122 LLKAASGVGST-DVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMV 180
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N VSW A+IA +A++ Q D L+ M ++P FT++S+L AC G+L QG+
Sbjct: 181 SKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKW 240
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ G V N+L+ MY K G++E+A VF+ + +D+VSWNSM+ GY+QHGL
Sbjct: 241 VHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGL 300
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ FEEM++ R+ P+ ITFL V+++C H GL++EG+ YFD M K+ ++P++ HY
Sbjct: 301 GKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVT 360
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPEC 420
+VDLLGRAG L+ A FI +MPI P A +W AAE L+
Sbjct: 361 MVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHY 420
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
THV L N+YA W+ AA+VRK+MK+ G+K P CSW+E+ N V+ F A+D ++ +
Sbjct: 421 PGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQR 480
Query: 481 SEILPVLDFLVDQMKTLGYVPE 502
EI + + + D++K +GYVP+
Sbjct: 481 REIHNMWEQISDKIKEIGYVPD 502
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 154/279 (55%), Gaps = 5/279 (1%)
Query: 125 DLHRERLKVDAS---FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
+L R++ K +A T + C + G L + + F ++ + ++L+ LY+
Sbjct: 2 ELIRQQCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYA 61
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
KC ++ A K+F+EM R+VV+WTA+I ++Q + L L M L+PN FT S
Sbjct: 62 KCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLAS 121
Query: 242 ILSACTGSGALG--QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+L A +G G+ QGR H +R G+ S + V+ +++ MY +C ++EEA +F+ M
Sbjct: 122 LLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVS 181
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K+ VSWN++IAGYA+ G +A LF M+++ VKP T+ V+ +C G +E+GK
Sbjct: 182 KNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWV 241
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
M K G K + ++D+ ++G +E+A+ ++
Sbjct: 242 HALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 280
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
++L CT L +G+ H + F + + N+L+++Y KCG++ A +F+ M +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE--EGKV 358
D+V+W ++I GY+QH A+ L EM++ +KP+ T ++ + G + +G+
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++G + ++D+ R LEEA+ I + + N V W A
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQ-LIFDVMVSKNEVSWNA 189
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 228/383 (59%), Gaps = 17/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ + + GS + G ++ G+ ++VYVGS+L+ +Y++C + A F+ MP
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP 251
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ VSW A+I+ A++ + + L L M+ +P FT++S+LSAC GAL QG+
Sbjct: 252 TKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKW 311
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ G + N+L+ MY K G++++A VF+ + D+VSWN+M+ G AQHGL
Sbjct: 312 VHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGL 371
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+D FE+M++ ++P+ I+FL V+++C H GL++EG YF+ M K+ ++P++ HY
Sbjct: 372 GKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVT 431
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPEC 420
VDLLGR GLL+ A FI++MPI P A +W AAE L+P
Sbjct: 432 FVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHD 491
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+ + L+N+YA W A+VRK+MK+ G+K P CSW+EI N V+ F A D+++ R+
Sbjct: 492 SGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRI 551
Query: 481 SEILPVLDFLVDQMKTLGYVPEV 503
EI + + ++K +GYVP+
Sbjct: 552 KEIRGKWEEISGKIKEIGYVPDT 574
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 150/283 (53%), Gaps = 2/283 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI-TLYSKCR 184
+ R L D + S + C + G + + F+ N V ++I +Y+KC
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA ++F+EMP +++V+WTA+IA F+Q + L L+ M +PN FT +S+L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
A L G H ++ G+ S + V ++L+ MY +CG+++ A F+ M K VS
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN++I+G+A+ G A+ L +M ++ +P T+ V+S+C G +E+GK M
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI 317
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K GLK + ++D+ +AG +++A+ ++ + P+ V W
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSW 359
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKC 284
+++ L P+ ++ +L CT G + QGR H + F +++ + N +++MY KC
Sbjct: 77 LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G +++A +F+ M KD+V+W ++IAG++Q+ A+ LF +M++ +P+ T ++
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLL 196
Query: 345 --SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
S HG ++ G K+G + + S +VD+ R G ++ A+ MP
Sbjct: 197 KASGSEHG--LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPT-K 253
Query: 403 NAVIWEA 409
+ V W A
Sbjct: 254 SEVSWNA 260
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 160/420 (38%), Positives = 254/420 (60%), Gaps = 24/420 (5%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + ++ R LKVD +++ +T+ +++ GG + + I++GF N +VGS LI L
Sbjct: 228 VELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDL 287
Query: 180 YSKCRV-IIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDF 237
YSKC +++ KVFEE+ ++V W +I+ F+Q E + + +R M+++ P+D
Sbjct: 288 YSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDC 347
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGF-FSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+F + SAC+ + G+ H I+ ++ + V N+L++MY KCGNV +A VF+
Sbjct: 348 SFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDT 407
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M ++VS NSMIAGYAQHG+ V ++ LFE M+++ + P+ ITF+ V+S+C H G VEEG
Sbjct: 408 MPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG 467
Query: 357 KVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
+ YF+ M + ++PE +HYSC++DLLGRAG L+EA I+ MP P ++ W
Sbjct: 468 QKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACR 527
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
+AA L LEP AA +V L+N+YA W++AA V++LM+++G+K PGC
Sbjct: 528 KHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGC 587
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEP 518
SWIEI V+ F AED S+ + EI + ++ +MK GYVP++ V D + EP
Sbjct: 588 SWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKD---EEVEP 644
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 143/296 (48%), Gaps = 26/296 (8%)
Query: 124 HDLHRERLKVDASFLSTAVT----SCGSTRNIRGGAPYQCLAIRTGF----IANVYVGSS 175
H L+ + L +++LS T CGS N + T F NV+ ++
Sbjct: 32 HALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ-----------TSFDLTQYPNVFSYNT 80
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI Y+K +I A +VF+E+P ++VS+ +IAA+A + L L+ +R +
Sbjct: 81 LINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLD 140
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
FT + ++ AC +G R HC + G+ Y V N++++ Y + G + EA VF
Sbjct: 141 GFTLSGVIIACGDD--VGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFR 198
Query: 296 NM---HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
M G+D VSWN+MI QH + A++LF EM+++ +K D T V+++
Sbjct: 199 EMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKD 258
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR-AGLLEEARDFIKQMPIYPNAVIW 407
+ G + M K G S ++DL + AG + E R +++ P+ V+W
Sbjct: 259 LVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAA-PDLVLW 313
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 158/367 (43%), Gaps = 47/367 (12%)
Query: 15 CSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQD 74
C+ L+T + ++ +Q+ + + K+LH AL +I P T S H L
Sbjct: 3 CTFPLQLQTFRNLLKACIAQR--DLITGKTLH-ALYFKSLIPPSTYLSN----HFTL--- 52
Query: 75 FLQTDSKHLDSQKFNHDFTGTNSTFG----------------SSNVFDQLLDTPVVDVEK 118
L + L + + + D T + F + VFD++ +V
Sbjct: 53 -LYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNT 111
Query: 119 LISMHHD-------------LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG 165
LI+ + D + R +D LS + +CG + C + G
Sbjct: 112 LIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLV--RQLHCFVVVCG 169
Query: 166 FIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV---RNVVSWTAIIAAFAQEWQVDMCLE 222
+ V ++++ YS+ + +A +VF EM R+ VSW A+I A Q + +E
Sbjct: 170 YDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVE 229
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
L+R M L+ + FT S+L+A T L G H I+ GF V + LI +Y
Sbjct: 230 LFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYS 289
Query: 283 KC-GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH-GLAVRAIDLFEEMMKQRVKPDAITF 340
KC G + E VF + D+V WN+MI+G++Q+ L+ I F EM PD +F
Sbjct: 290 KCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSF 349
Query: 341 LGVISSC 347
+ V S+C
Sbjct: 350 VCVTSAC 356
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 223 LYRMMRNSMLEPNDFT---FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L+ + S++ P+ + FT + S C G+L +++ T FSY N+LI+
Sbjct: 31 LHALYFKSLIPPSTYLSNHFTLLYSKC---GSLHNAQTSFDLTQYPNVFSY----NTLIN 83
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
Y K + A VF+ + DIVS+N++IA YA G A+ LF E+ + R D T
Sbjct: 84 AYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFT 143
Query: 340 FLGVISSCRHG-GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
GVI +C GLV + + + G + V+ R G L EAR ++M
Sbjct: 144 LSGVIIACGDDVGLVRQLHCF---VVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREM 200
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 232/396 (58%), Gaps = 18/396 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E + +D + +T+CG+ G RT + NV+VGS+L+ +YSKCR
Sbjct: 269 MRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRS 328
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I A VF M RN++SWTA+I + Q + + + M+ ++P+DFT S++S+
Sbjct: 329 IRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISS 388
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C +L +G HC + G YI V+N+L+++Y KCG++E+A +F+ M D VSW
Sbjct: 389 CANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 448
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+++ GYAQ G A IDLFE+M+ +KPD +TF+GV+S+C GLVE+G YFDSM K
Sbjct: 449 TALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQK 508
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------------- 408
H + P DHY+C++DL R+G +EA +FIKQMP P+A W
Sbjct: 509 DHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGK 568
Query: 409 -AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
AAE+ L +P+ A++V L +++A W + A +R+ M+D+ +K PGCSWI+ N V
Sbjct: 569 WAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKV 628
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ F A+D+S+ S I L++L +M GY P+V
Sbjct: 629 HIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDV 664
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 180/411 (43%), Gaps = 52/411 (12%)
Query: 36 LKQISSSKSLHKALRVLD-IISPR--TRDSTKTEV-HLRLIQDF--LQTDSKHLDSQKFN 89
L + S L +A RV D + P TR++ + + H RL+ D L D+ +N
Sbjct: 55 LTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYN 114
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTR 149
TG +ST +P V+ ++ L E ++ LS + +
Sbjct: 115 ALITGFSST-----------GSPARSVQLYRAL---LREESVRPTRITLSAMIMVASALS 160
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV------- 202
+ G C +R GF A +VGS L+ +Y+K +I DA +VF+EM + VV
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 203 ------------------------SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+WT ++ Q L+++R MR + + +T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F SIL+AC A +G+ H R + + V ++L+ MY KC ++ A VF M
Sbjct: 281 FGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
++I+SW +MI GY Q+ + A+ F EM +KPD T VISSC + +EEG
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ GL + + +V L G+ G +E+A +M + + V W A
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTA 450
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 5/174 (2%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
+++ + P F +L+A SG L + R + F+ N+L+S
Sbjct: 38 ILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR----NALLSALAHSR 93
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVI 344
V + +F +M +D VS+N++I G++ G R++ L+ ++++ V+P IT +I
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G + + G S +VD+ + GL+ +AR ++M
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 160/431 (37%), Positives = 241/431 (55%), Gaps = 56/431 (12%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAI-RTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
D L++ V++C S IR G + R + ++ +G++L+ +Y+KCR + +A V
Sbjct: 251 DEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
Query: 193 FEEMPVRNVVS-------------------------------WTAIIAAFAQEWQVDMCL 221
F+ MP+RNVVS W A+IA + Q + + +
Sbjct: 311 FDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAV 370
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF------SYIQVAN 275
L+ +++ + P +TF ++L+AC L GR AH Q ++ GF+ S I V N
Sbjct: 371 RLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGN 430
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
SLI MY KCG VE+ VF M +D+VSWN+MI GYAQ+G A+++F +M+ KP
Sbjct: 431 SLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKP 490
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
D +T +GV+S+C H GLVEEG+ YF SM + GL P DH++C+VDLLGRAG L+EA D
Sbjct: 491 DHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDL 550
Query: 395 IKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCW 437
I+ MP+ P+ V+W + AE + ++P + +V L+N+YA + W
Sbjct: 551 IQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRW 610
Query: 438 DQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
RVRK M+ +G+ PGCSWIEI + V+ F +DK + +I VL FL +QMK
Sbjct: 611 KDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWA 670
Query: 498 GYVPEVHEEKV 508
GYVPE ++++
Sbjct: 671 GYVPEADDDEI 681
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 167/331 (50%), Gaps = 39/331 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + D+H E ++ +A+++C ++ G L ++ ++ +VY+GS+L
Sbjct: 133 EEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSAL 192
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +YSKC V+ A + F+ M VRN+VSW ++I + Q LE++ MM ++ +EP++
Sbjct: 193 VDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDE 252
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T S++SAC A+ +G H + + R + + + + N+L+ MY KC V EA VF+
Sbjct: 253 ITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFD 312
Query: 296 -------------------------------NMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
NM K++VSWN++IAGY Q+G A+ L
Sbjct: 313 RMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRL 372
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL----KPELDHY--SCV 378
F + ++ + P TF ++++C + ++ G+ + KHG E D + + +
Sbjct: 373 FLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSL 432
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+D+ + G++E+ ++M + + V W A
Sbjct: 433 IDMYMKCGMVEDGCLVFERM-VERDVVSWNA 462
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 32/300 (10%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D+S + + SC +++ I+T F + +++ + L+ Y KC DA KV
Sbjct: 17 LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76
Query: 193 FEEMPVRNVVS-------------------------------WTAIIAAFAQEWQVDMCL 221
F+ MP RN S W A+++ FAQ + + L
Sbjct: 77 FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+ M + N+++F S LSAC G L G H + + + + ++L+ MY
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY 196
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG V A F+ M ++IVSWNS+I Y Q+G A +A+++F MM V+PD IT
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256
Query: 342 GVISSCRHGGLVEEG-KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
V+S+C + EG +++ + + + +L + +VD+ + + EAR +MP+
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F +L +C S + R H + I+ F S I + N L+ Y KCG E+A VF+ M
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
++ S+N++++ + G A ++F+ M +PD ++ ++S EE
Sbjct: 82 QRNTFSYNAVLSVLTKFGKLDEAFNVFKSM----PEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEP 418
+F M H L+ YS L AGL + M I +A+I ++SR LL+
Sbjct: 138 FFVDM--HSEDFVLNEYSFGSALSACAGLTD------LNMGIQIHALI---SKSRYLLDV 186
Query: 419 ECAATHVQLANLYAGVRCWDQA 440
+ V + + V C +A
Sbjct: 187 YMGSALVDMYSKCGVVACAQRA 208
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 240/433 (55%), Gaps = 56/433 (12%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG-FIANVYVGSSLITLYSKCRVIIDA 189
K D L++ V++C + + G +++ F ++ +G++L+ +Y+KC + +A
Sbjct: 253 FKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEA 312
Query: 190 YKVFEEMPVRN-------------------------------VVSWTAIIAAFAQEWQVD 218
VF+ MPVRN +VSW A+IA + Q + +
Sbjct: 313 RCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENE 372
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF-FSY-----IQ 272
L L+RM++ + P +TF ++L+A L GR AH ++ GF F I
Sbjct: 373 EALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIF 432
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V NSLI MY KCG+VEE + VF NM KD VSWN+MI GYAQ+G + A++LF++M++
Sbjct: 433 VGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESG 492
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEA 391
KPD +T +G + +C H GLVEEG+ YF SM K HGL P DHY+C+VDLLGRAG LEEA
Sbjct: 493 EKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEA 552
Query: 392 RDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGV 434
+D I+ MP P+AV+W + AE ++P + +V LAN+Y+ +
Sbjct: 553 KDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSEL 612
Query: 435 RCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
W A VRKLM+ +G+ PGCSWI+I + V+ F +DK + + EI +L L M
Sbjct: 613 GRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHM 672
Query: 495 KTLGYVPEVHEEK 507
+ GYVP+ + +
Sbjct: 673 RQAGYVPDASDHE 685
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 153/320 (47%), Gaps = 39/320 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+HR+ ++ + +++C ++++ GA L ++ + +V++GS LI YSKC +
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A +VF+ M +NVVSW +I + Q LE + M +P++ T S++SA
Sbjct: 207 VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSA 266
Query: 246 CTGSGALGQGRSAHCQTIRMG-FFSYIQVANSLISMYCKCGNVEEAVYVFNNM------- 297
C A +G H + ++ F + + + N+L+ MY KCG V EA VF+ M
Sbjct: 267 CATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVS 326
Query: 298 ------------------------HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
KDIVSWN++IAGY Q+G A+ LF + ++ V
Sbjct: 327 ETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESV 386
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK------PELDHYSCVVDLLGRAGL 387
P TF ++++ + +E G+ + KHG + P++ + ++D+ + G
Sbjct: 387 CPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGS 446
Query: 388 LEEARDFIKQMPIYPNAVIW 407
+EE + M + + V W
Sbjct: 447 VEEGLRVFENM-VEKDHVSW 465
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 138/304 (45%), Gaps = 33/304 (10%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D+S + + C R+ R I+T F V++ + LI +Y KC + A KVF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 194 EEMPVRNVVS-------------------------------WTAIIAAFAQEWQVDMCLE 222
+ M RNV S W ++IA FAQ + + L+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
+ M ND++F S LSAC+ L G H + + + + + LI Y
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG V A VF+ M K++VSWN +I Y Q+G A+ A++ F M + KPD +T
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262
Query: 343 VISSCRHGGLVEEG-KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V+S+C +EG +++ + + +L + +VD+ + G + EAR +MP+
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPV- 321
Query: 402 PNAV 405
NAV
Sbjct: 322 RNAV 325
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 232/370 (62%), Gaps = 17/370 (4%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
CL I+ G + + GS+LI +YSKC + DA VFEE+ R++V W A+ + ++Q+ +
Sbjct: 480 HCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLEN 539
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+ L+LY+ ++ S L+PN+FTF ++++A + +L G+ H Q I+MG V NSL
Sbjct: 540 EESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSL 599
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ MY KCG++EE+ F++ + +DI WNSMI+ YAQHG A +A+++FE M+ + VKP+
Sbjct: 600 VDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNY 659
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
+TF+G++S+C H GL++ G +F+SM+K G++P +DHY+C+V LLGRAG + EA++F+K+
Sbjct: 660 VTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKK 719
Query: 398 MPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQA 440
MPI P AV+W AAE + +P + +++ L+N++A W
Sbjct: 720 MPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASV 779
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
VR+ M + PG SWIE+ N V+RF A D ++ + I VLD L+ Q+K GYV
Sbjct: 780 RMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFGYV 839
Query: 501 PEVHEEKVDD 510
P +DD
Sbjct: 840 PNAATFFLDD 849
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 22/321 (6%)
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH--HDLHRERL------------KVDA 135
H ++ N + +FD + +V ++SM+ H E L K +
Sbjct: 95 HAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNE 154
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
L++ V +C N+ ++ GF+ +VYVG+SLI Y+K + +A +F+
Sbjct: 155 YILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDG 214
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ V+ V+WTAIIA +A+ + ++ L+L+ MR + P+ + +S+LSAC+ L G
Sbjct: 215 LKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGG 274
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H +R GF + V N +I Y KC V+ +FN + KD+VSW +MIAG Q+
Sbjct: 275 KQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQN 334
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
A+DLF EM+++ KPDA V++SC +++G+ + + +K +D+
Sbjct: 335 SFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGR----QVHAYAIKVNIDND 390
Query: 376 SCV----VDLLGRAGLLEEAR 392
V +D+ + L AR
Sbjct: 391 DFVKNGLIDMYAKCDSLTNAR 411
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 157/301 (52%), Gaps = 13/301 (4%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLH-----------RERLKVDASFLSTAVTSCGSTRN 150
+F++L+D VV +I+ M + H R+ K DA ++ + SCGS +
Sbjct: 312 LFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQA 371
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
++ G AI+ + +V + LI +Y+KC + +A KVF+ + NVVS+ A+I
Sbjct: 372 LQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEG 431
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
++++ ++ L+L+R MR S+ P TF S+L + L HC I+ G
Sbjct: 432 YSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLD 491
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
++LI +Y KC V +A VF ++ +DIV WN+M +GY+Q ++ L++++
Sbjct: 492 SFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQM 551
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
R+KP+ TF VI++ + + G+ + + + K GL + + +VD+ + G +EE
Sbjct: 552 SRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEE 611
Query: 391 A 391
+
Sbjct: 612 S 612
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 128/240 (53%), Gaps = 2/240 (0%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE-WQVDMCLELYRMM 227
+V++ ++L+ YSK + DA K+F+ MP RN+V+W+++++ + Q + V+ L R M
Sbjct: 86 DVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFM 145
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
R+ +PN++ S++ ACT G L Q H ++ GF + V SLI Y K G V
Sbjct: 146 RSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYV 205
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+EA +F+ + K V+W ++IAGYA+ G + ++ LF +M + V PD V+S+C
Sbjct: 206 DEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSAC 265
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+E GK + + G ++ + ++D + ++ R ++ + + V W
Sbjct: 266 SMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRL-VDKDVVSW 324
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D +S+ +++C + GG +R GF +V V + +I Y KC + K+F
Sbjct: 254 DRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLF 313
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ ++VVSWT +IA Q ++L+ M +P+ F TS+L++C AL
Sbjct: 314 NRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQ 373
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
+GR H I++ + V N LI MY KC ++ A VF+ + ++VS+N+MI GY+
Sbjct: 374 KGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYS 433
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+ V A+DLF EM P +TF+
Sbjct: 434 RQDKLVEALDLFREMRLSLSPPTLLTFV 461
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 256 RSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
+ H + +GF + + + N+L+ Y K +A +F+ M +++V+W+SM++ Y Q
Sbjct: 71 KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130
Query: 315 HGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
HG +V A+ LF M+ KP+ V+ +C G + + + K G ++
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++D + G ++EAR + + V W A
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKV-KTTVTWTA 225
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 250/441 (56%), Gaps = 31/441 (7%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVV-------------DVEKLISMHHDLHRERLKVDASFL 138
+ G S G+ VFD++ VV ++E + + E ++ D
Sbjct: 308 YMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITY 367
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ +C S+ ++ +R GF ++ V ++L+ +Y+KC I DA +VF+ M
Sbjct: 368 IHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSR 427
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+VVSW+A+I A+ + + E + +M+ + +EP+ T+ ++L+AC GAL G
Sbjct: 428 RDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEI 487
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
+ Q I+ S+I V N+LI+M K G++E A Y+F NM +D+V+WN MI GY+ HG A
Sbjct: 488 YTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNA 547
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSC 377
A+DLF+ M+K+R +P+++TF+GV+S+C G VEEG+ +F + G+ P ++ Y C
Sbjct: 548 REALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGC 607
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPEC 420
+VDLLGRAG L+EA I +MP+ PN+ IW AAE L+ EP
Sbjct: 608 MVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYD 667
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
A +VQL+++YA W+ A+VRK+M+ +G++ GC+WIE+ ++ F ED+S+ +
Sbjct: 668 GAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQA 727
Query: 481 SEILPVLDFLVDQMKTLGYVP 501
EI L L+ +K GY+P
Sbjct: 728 GEIYAELARLMTAIKREGYIP 748
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 166/330 (50%), Gaps = 16/330 (4%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVV-------------DVEKLISMHHDLHRERLKVD-ASF 137
+ S G+ VFD L V D EK + + + +E K + SF
Sbjct: 207 YVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISF 266
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS + C + + G + TG + +V V ++LI +Y C I A +VF++M
Sbjct: 267 LSI-LDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMK 325
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
VR+VVSWT +I +A+ ++ L+ M+ ++P+ T+ I++AC S L R
Sbjct: 326 VRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLARE 385
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H Q +R GF + + V +L+ MY KCG +++A VF+ M +D+VSW++MI Y ++G
Sbjct: 386 IHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGC 445
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A + F M + V+PD +T++ ++++C H G ++ G + K L + +
Sbjct: 446 GEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNA 505
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++++ + G +E AR + M + + V W
Sbjct: 506 LINMNVKHGSIERARYIFENM-VQRDVVTW 534
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 186/397 (46%), Gaps = 28/397 (7%)
Query: 38 QISSSKSLHKALRVLDIISPRT-----------RDST-KTEVHLRLIQDFLQTDSKHLDS 85
Q+ ++ LH+ + I RT RD+ +V +IQ Q + L++
Sbjct: 42 QVGANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNT 101
Query: 86 QKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRE-------RLKVDASFL 138
H G + + FD + + VV +I+ + L R VD +
Sbjct: 102 LIKLHSICG--NMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAME 159
Query: 139 STAVT------SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+ +T +C S ++ G + I+ GF+++ +G++L+++Y K + A +V
Sbjct: 160 PSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQV 219
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+ + R+V ++ +I +A+ + +L+ M+ +PN +F SIL C+ AL
Sbjct: 220 FDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEAL 279
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
G++ H Q + G ++VA +LI MY CG++E A VF+ M +D+VSW MI GY
Sbjct: 280 AWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGY 339
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
A++ A LF M ++ ++PD IT++ +I++C + + + + G +L
Sbjct: 340 AENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDL 399
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +V + + G +++AR M + V W A
Sbjct: 400 LVDTALVHMYAKCGAIKDARQVFDAMS-RRDVVSWSA 435
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 239/433 (55%), Gaps = 31/433 (7%)
Query: 104 VFDQLLDTPVVDVEKLI-------------SMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD++ + VV L+ + ++ R+ K D+ LS+ + +
Sbjct: 129 VFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGAD 188
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+R G A R GF +V+VGSSLI +Y+ C + KVF+ +PVR+ + W +++A
Sbjct: 189 VRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAG 248
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
AQ VD L L+R M +S ++P TF+S++ AC +L G+ H IR GF
Sbjct: 249 CAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGN 308
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ +++SLI MYCKCGNV A +F+ + DIVSW +MI G+A HG A A+ LF+ M
Sbjct: 309 VFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMEL 368
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLE 389
+KP+ ITFL V+++C H GLV++G YF+SM+ H G+ P L+H++ + D LGR G LE
Sbjct: 369 GNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLE 428
Query: 390 EARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYA 432
EA +FI M I P A +W E A+ LEP +H+ L+N Y+
Sbjct: 429 EAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYS 488
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
W++AA +RK M+ KG++ P CSWIE+ N + F A DKS+ I+ L+ +
Sbjct: 489 SSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSE 548
Query: 493 QMKTLGYVPEVHE 505
QM GYVP +
Sbjct: 549 QMVRQGYVPNTDD 561
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 136/286 (47%), Gaps = 15/286 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK--------------C 183
L A+ SC + GA LA+R+G A+ + ++L+ LY K
Sbjct: 61 LPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSA 120
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
V+ KVF+EMP ++VVSW ++ A+ + L L R M +P+ FT +S+L
Sbjct: 121 VVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVL 180
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
+ +G H R GF + V +SLI MY C + +V VF+N+ +D +
Sbjct: 181 PIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAI 240
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
WNSM+AG AQ+G A+ LF M+ +KP +TF +I +C + + GK +
Sbjct: 241 LWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYV 300
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + S ++D+ + G + AR ++ P+ V W A
Sbjct: 301 IRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQ-SPDIVSWTA 345
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 233/386 (60%), Gaps = 20/386 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+T +TSC S+ + G L I+T F ++++VGSSL+ +Y+K I +A +VF+ +P
Sbjct: 114 FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+VVS TAII+ +AQ + L+L+R ++ + N T+ S+L+A +G AL GR
Sbjct: 174 ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ 233
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R Y+ + NSLI MY KCG++ + +F++M + ++SWN+M+ GY++HGL
Sbjct: 234 VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGL 293
Query: 318 AVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA--KHGLKPELDH 374
A++LF+ M ++ +VKPD++TFL V+S C HGG+ + G F M K G +PE++H
Sbjct: 294 GREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEH 353
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LE 417
Y CVVDL GRAG +EEA +FIK+MP P A IW E RLL +E
Sbjct: 354 YGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIE 413
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
E A +V L+NLYA WD VR+LMK+K + PG SWIE+ ++ F A D+S+
Sbjct: 414 SENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSH 473
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPEV 503
R E+ + L ++K GYVPE+
Sbjct: 474 PRKEEVFAKVRELSIKIKEAGYVPEL 499
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 8/273 (2%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+V+ + +T C S IR G I+T + VY+ + LI LY+KCR + DA
Sbjct: 6 LEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDAR 65
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+V +EMP RNVVSWTA+I+ ++Q L L+ M S PN+FTF ++L++CT S
Sbjct: 66 RVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSS 125
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
GR H I+ F S+I V +SL+ MY K G + EA VF+ + +D+VS ++I+
Sbjct: 126 GFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIIS 185
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GYAQ GL A+DLF + ++ ++ + +T+ V+++ ++ G+ + H L+
Sbjct: 186 GYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR----QVHSHVLRA 241
Query: 371 ELDHY----SCVVDLLGRAGLLEEARDFIKQMP 399
+L Y + ++D+ + G L +R MP
Sbjct: 242 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP 274
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 17/229 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD L + VV +IS + L RE ++ + ++ +T+
Sbjct: 168 VFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAA 227
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G +R V + +SLI +YSKC + + ++F+ MP R V+SW A++
Sbjct: 228 LDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 287
Query: 211 FAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM--GF 267
+++ +EL+++M+ + ++P+ TF ++LS C+ G +G + + GF
Sbjct: 288 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGF 347
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYAQH 315
I+ ++ ++ + G VEEA M + + W S++ H
Sbjct: 348 EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 396
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 253/445 (56%), Gaps = 31/445 (6%)
Query: 104 VFDQLLDTPVVDVEKLISMHH-------------DLHRERLKVDASFLSTAVTSCGSTRN 150
VFD +L+ +V +I ++ ++ E K +S+ +++CG+ +
Sbjct: 120 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCD 179
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
CL+++T N+YVG++L+ LY+KC +I DA +VFE M ++ V+W++++A
Sbjct: 180 ALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAG 239
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ Q + L LYR + LE N FT +S++ AC+ AL +G+ H + GF S
Sbjct: 240 YVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSN 299
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ VA+S + MY KCG++ E+ +F+ + K+I WN++I+G+A+H + LFE+M +
Sbjct: 300 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQ 359
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLE 389
+ P+ +TF ++S C H GLVEEG+ +F M +GL P + HYSC+VD+LGRAGLL
Sbjct: 360 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 419
Query: 390 EARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYA 432
EA + IK +P P A IW E A +L LEPE A HV L+N+YA
Sbjct: 420 EAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYA 479
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
+ W++ A+ RKL++D +K G SWI+I + V+ FR + S+ R+ EI +LD LV
Sbjct: 480 ANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVI 539
Query: 493 QMKTLGYVPEVHEEKVDDASHKRTE 517
+++ GY P V E D K+ E
Sbjct: 540 ELRKFGYKPSVEHELHDVEIGKKEE 564
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 5/245 (2%)
Query: 152 RGGAPYQCLA-----IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
R GA + A +R +V + + LI YSKC + A +VF+ M R++VSW
Sbjct: 75 RNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 134
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I + + L+++ MRN + ++FT +S+LSAC + + + HC +++
Sbjct: 135 MIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTS 194
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ V +L+ +Y KCG + +AV VF +M K V+W+SM+AGY Q A+ L+
Sbjct: 195 LDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYR 254
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+ ++ + T VI +C + + EGK + K G + S VD+ + G
Sbjct: 255 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCG 314
Query: 387 LLEEA 391
L E+
Sbjct: 315 SLRES 319
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 7/216 (3%)
Query: 196 MPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
+P R N S + I+ FA Q ++ Y N +++ +DF IL C +GA+ +
Sbjct: 25 LPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFN-VVQASDFI--EILQLCARNGAVME 81
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
++ H +T+RM + ++N LI+ Y KCG VE A VF+ M + +VSWN+MI Y +
Sbjct: 82 AKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 141
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC-RHGGLVEEGKVYFDSMAKHGLKPELD 373
+ + A+D+F EM + K T V+S+C + +E K++ SM K L L
Sbjct: 142 NRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSM-KTSLDLNLY 200
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++DL + G++ +A + M ++V W +
Sbjct: 201 VGTALLDLYAKCGMINDAVQVFESMQ-DKSSVTWSS 235
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/420 (38%), Positives = 252/420 (60%), Gaps = 24/420 (5%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + ++ R LKVD +++ +T+ +++ GG + + I++GF N +VGS LI L
Sbjct: 228 VGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDL 287
Query: 180 YSKCR-VIIDAYKVFEEMPVRNVVSWTAIIAAFA-QEWQVDMCLELYRMMRNSMLEPNDF 237
YSKC +++ KVFEE+ ++V W +I+ F+ E + L +R M+ + P+D
Sbjct: 288 YSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDC 347
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGF-FSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+F + SAC+ + G+ H I+ ++ + V N+L++MY KCGNV +A VF+
Sbjct: 348 SFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDT 407
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M + VS NSMIAGYAQHG+ V ++ LFE M+++ + P++ITF+ V+S+C H G VEEG
Sbjct: 408 MPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEG 467
Query: 357 KVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
+ YF+ M + ++PE +HYSC++DLLGRAG L+EA I+ MP P ++ W
Sbjct: 468 QKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACR 527
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
+AA L LEP AA +V L+N+YA W++AA V++LM+++G+K PGC
Sbjct: 528 KHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGC 587
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEP 518
SWIEI V+ F AED S+ + EI + ++ +MK GYVP++ V D + EP
Sbjct: 588 SWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKD---EEVEP 644
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 143/292 (48%), Gaps = 18/292 (6%)
Query: 124 HDLHRERLKVDASFLSTAVT----SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
H L+ + L +++LS T CGS N + + NV+ ++LI
Sbjct: 32 HALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ-------TSFHLTQYPNVFSYNTLINA 84
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K +I A +VF+E+P ++VS+ +IAA+A + L L+ +R L + FT
Sbjct: 85 YAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTL 144
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-- 297
+ +++AC +G R HC + G Y V N++++ Y + G + EA VF M
Sbjct: 145 SGVITACGDD--VGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGE 202
Query: 298 -HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
G+D VSWN+MI QH + A+ LF EM+++ +K D T V+++ + G
Sbjct: 203 GGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGG 262
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGR-AGLLEEARDFIKQMPIYPNAVIW 407
+ + M K G S ++DL + AG + E R +++ P+ V+W
Sbjct: 263 RQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITA-PDLVLW 313
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Query: 223 LYRMMRNSMLEPNDFT---FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L+ + S++ P+ + FT + S C G+L +++ T FSY N+LI+
Sbjct: 31 LHALYFKSLIPPSTYLSNHFTLLYSKC---GSLHNAQTSFHLTQYPNVFSY----NTLIN 83
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
Y K + A VF+ + DIVS+N++IA YA G + LFEE+ + R+ D T
Sbjct: 84 AYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFT 143
Query: 340 FLGVISSCRHG-GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
GVI++C GLV + F + H ++ + V+ R G L EAR ++M
Sbjct: 144 LSGVITACGDDVGLVRQLHC-FVVVCGHDCYASVN--NAVLACYSRKGFLSEARRVFREM 200
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 246/413 (59%), Gaps = 22/413 (5%)
Query: 111 TPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV 170
T +D+E + + + E +K+ + +T + C + + + C I+ G ++
Sbjct: 271 TNGLDLEAF-ELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDL 329
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEM-PVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMR 228
+ ++L+ YSKC I DA+K+F M V+NVVSWTAII+ + Q + D + L+ +M R
Sbjct: 330 NIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR 389
Query: 229 NSMLEPNDFTFTSILSACTG-SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+EPN+FTF+S+L+AC + ++ QG+ H +I+ GF + + V+++L++MY K GN+
Sbjct: 390 EEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNI 449
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
E A VF +D+VSWNSMI+GYAQHG +++ +FEEM + ++ D ITF+GVIS+C
Sbjct: 450 ESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISAC 509
Query: 348 RHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
H GLV EG+ YFD M K + + P ++HYSC+VDL RAG+LE+A D I +MP A I
Sbjct: 510 THAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATI 569
Query: 407 WE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
W AAE + L+P+ +A +V L+N+YA W + A+VRKLM
Sbjct: 570 WRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDM 629
Query: 450 KGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
K +K G SWIE+ N + F A D S+ + I L+ L ++K GY P+
Sbjct: 630 KKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPD 682
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 146/284 (51%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L R D S LS + CG + G C I+ GF+ +V VG+SL+ +Y K
Sbjct: 83 LRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTES 142
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ D +VF+EM V+NVVSWT+++A + Q + L+L+ M+ ++PN FTF ++L
Sbjct: 143 VEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGG 202
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
GA+ +G H I+ G S I V NS+++MY K V +A VF++M ++ VSW
Sbjct: 203 LAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSW 262
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
NSMIAG+ +GL + A +LF M + VK F VI C + + K + K
Sbjct: 263 NSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK 322
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+G +L+ + ++ + +++A M N V W A
Sbjct: 323 NGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTA 366
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 233/396 (58%), Gaps = 19/396 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L + + + A L+T + C + ++ G C AI++GF+ ++ VG++L+++Y+KC +
Sbjct: 316 LKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGI 375
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I A + F EM +R+ VS+TAII+ + Q + L ++ M+ S + P T S+L A
Sbjct: 376 INGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPA 435
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C L G +HC I GF + + N+LI MY KCG ++ A VF+ MH + IVSW
Sbjct: 436 CAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSW 495
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI Y HG+ + A+ LF+ M + +KPD +TF+ +IS+C H GLV EGK +F++M +
Sbjct: 496 NTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQ 555
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL--------- 415
G+ P ++HY+C+VDLL RAGL +E FI++MP+ P+ +W A S
Sbjct: 556 DFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGE 615
Query: 416 --------LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
L PE V L+N+Y+ V WD AA+VR K++G + +PGCSWIEI VV
Sbjct: 616 GVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVV 675
Query: 468 YRFRAED-KSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ F +S+ +L++I LD L+ +MK LGY E
Sbjct: 676 HTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAE 711
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 2/236 (0%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVR--NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
L+ LY C + A VF++MP R NVV W +I A+A + ++LY M +
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN FTF +L AC+ +GR HC R+ S + V+ +L+ Y KCG +++A V
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ MH +D+V+WNSMI+G++ H + + M+ V P++ T +GV+ + +
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSL 236
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GK + G ++ + ++D+ G+ ++ AR M I N V W A
Sbjct: 237 RHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSA 292
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 153/315 (48%), Gaps = 17/315 (5%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS---MHHDLHRE--RLKV--------DASFLSTAVTSCGS 147
+ VFD++ VV +IS +H + E RL V ++S + + +
Sbjct: 173 AKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQ 232
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTA 206
++R G +R GF+ +V VG+ ++ +Y KC+ I A ++F+ M V+N V+W+A
Sbjct: 233 VNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSA 292
Query: 207 IIAAFAQEWQVDMCLELY---RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
++ A+ + LEL+ M+++ ++ + T +++ C L G HC I
Sbjct: 293 MVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAI 352
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ GF + V N+L+SMY KCG + A+ FN M +D VS+ ++I+GY Q+G + +
Sbjct: 353 KSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLR 412
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F EM + P+ T V+ +C H + G G + + ++D+
Sbjct: 413 MFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYA 472
Query: 384 RAGLLEEARDFIKQM 398
+ G ++ AR +M
Sbjct: 473 KCGKIDTARKVFDRM 487
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 6/264 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C + + G C R +NVYV ++L+ Y+KC + DA +VF++M R+V
Sbjct: 126 LKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDV 185
Query: 202 VSWTAIIAAFA-QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V+W ++I+ F+ E D L M+N + PN T +L A +L G+ H
Sbjct: 186 VAWNSMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKEIHG 244
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQHGLAV 319
+R GF + V ++ +Y KC ++ A +F+ M K+ V+W++M+ Y
Sbjct: 245 FCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMR 304
Query: 320 RAIDLFEEMMKQR---VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
A++LF +++ + + A+T VI C + + G K G +L +
Sbjct: 305 EALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGN 364
Query: 377 CVVDLLGRAGLLEEARDFIKQMPI 400
++ + + G++ A F +M +
Sbjct: 365 TLLSMYAKCGIINGAMRFFNEMDL 388
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + M ++ + + + L++ + +C + G+ C AI GF A+ + ++L
Sbjct: 408 EEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNAL 467
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC I A KVF+ M R +VSW +I A+ L L+ M++ L+P+D
Sbjct: 468 IDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDD 527
Query: 237 FTFTSILSACTGSGALGQGR 256
TF ++SAC+ SG + +G+
Sbjct: 528 VTFICLISACSHSGLVAEGK 547
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/413 (38%), Positives = 236/413 (57%), Gaps = 49/413 (11%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE--- 194
LST V +C S ++ G I+ GF ++V V ++L+ +Y++C + DA VF+
Sbjct: 13 LSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMS 72
Query: 195 ----------------------------EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
EM R+VVSWTA+IA +AQ D L ++
Sbjct: 73 ERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQ 132
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
MR + ++ + F S+LSAC AL GR H ++ GF I V ++L+ MY K G+
Sbjct: 133 MRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGS 192
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+E+A VF+ M ++ VSWNS+I G AQHG A+ LFE+M++ +KP+ I+F+GV+S+
Sbjct: 193 MEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSA 252
Query: 347 CRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
C H GLV EG+ YF+ M + +G+ P++ HY+C++DLLGRAG L+EA +FI MP+ P+
Sbjct: 253 CSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVS 312
Query: 406 IWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMK 448
+W A AE L +E + A +V L+N+YA WD AA+VRKLMK
Sbjct: 313 VWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMK 372
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
D+G+ PG SWIE+ +++ F A + S+ +L EI L+ L +MK GYVP
Sbjct: 373 DRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVP 425
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 32/214 (14%)
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M ++PN FT ++++ AC +L QG+ AH I+MGF S + V +L+ MY +CG+
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 287 VEEAVYVFNNMHGKDIVSWNSMI-------------------------------AGYAQH 315
+E+A +VF+ M + +WN+MI AGYAQ+
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G ++++F +M K +K D V+S+C +E G+ + + + G ++
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S +VD+ ++G +E+A +MP N V W +
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMP-QRNEVSWNS 213
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 114/224 (50%), Gaps = 2/224 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ + + + +K D + + +++C + G + +++GF ++ VGS+L+ +
Sbjct: 127 LNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDM 186
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K + DA +VF++MP RN VSW +II AQ + + + L+ M + ++PN+ +F
Sbjct: 187 YAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISF 246
Query: 240 TSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+LSAC+ +G + +GR + T G + +I + + G ++EA N M
Sbjct: 247 VGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMP 306
Query: 299 GK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+ D+ W +++ HG A + E ++ V+ I L
Sbjct: 307 VEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVL 350
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 233/386 (60%), Gaps = 20/386 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+T +TSC S+ + G L I+T F ++++VGSSL+ +Y+K I +A +VF+ +P
Sbjct: 581 FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+VVS TAII+ +AQ + L+L+R ++ + N T+ S+L+A +G AL GR
Sbjct: 641 ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ 700
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R Y+ + NSLI MY KCG++ + +F++M + ++SWN+M+ GY++HGL
Sbjct: 701 VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGL 760
Query: 318 AVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA--KHGLKPELDH 374
A++LF+ M ++ +VKPD++TFL V+S C HGG+ + G F M K G +PE++H
Sbjct: 761 GREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEH 820
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LE 417
Y CVVDL GRAG +EEA +FIK+MP P A IW E RLL +E
Sbjct: 821 YGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIE 880
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
E A +V L+NLYA WD VR+LMK+K + PG SWIE+ ++ F A D+S+
Sbjct: 881 SENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSH 940
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPEV 503
R E+ + L ++K GYVPE+
Sbjct: 941 PRKEEVFAKVRELSIKIKEAGYVPEL 966
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 8/273 (2%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+V+ + +T C S IR G I+T + VY+ + LI LY+KCR + DA
Sbjct: 473 LEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDAR 532
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+V +EMP RNVVSWTA+I+ ++Q L L+ M S PN+FTF ++L++CT S
Sbjct: 533 RVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSS 592
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
GR H I+ F S+I V +SL+ MY K G + EA VF+ + +D+VS ++I+
Sbjct: 593 GFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIIS 652
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GYAQ GL A+DLF + ++ ++ + +T+ V+++ ++ G+ + H L+
Sbjct: 653 GYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR----QVHSHVLRA 708
Query: 371 ELDHY----SCVVDLLGRAGLLEEARDFIKQMP 399
+L Y + ++D+ + G L +R MP
Sbjct: 709 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP 741
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 17/229 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD L + VV +IS + L RE ++ + ++ +T+
Sbjct: 635 VFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAA 694
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G +R V + +SLI +YSKC + + ++F+ MP R V+SW A++
Sbjct: 695 LDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 754
Query: 211 FAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM--GF 267
+++ +EL+++M+ + ++P+ TF ++LS C+ G +G + + GF
Sbjct: 755 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGF 814
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYAQH 315
I+ ++ ++ + G VEEA M + + W S++ H
Sbjct: 815 EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 863
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 248/411 (60%), Gaps = 18/411 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+++ + H++ ++ D L + +T+CG ++ G G N + +SL
Sbjct: 207 EEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSL 266
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC + A ++F++M R+VV+W+A+I+ ++Q + L+L+ M+ + ++PN+
Sbjct: 267 VDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNE 326
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T SILS+C GAL G+ H + + + +L+ Y KCG+VE ++ VF
Sbjct: 327 ITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGK 386
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M K+++SW +I G A +G +A++ F M+++ V+P+ +TF+GV+S+C H GLV+EG
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEG 446
Query: 357 KVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
+ F SM++ G++P ++HY C+VD+LGRAGL+EEA FIK MPI PNAVIW
Sbjct: 447 RDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCK 506
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
E+ + ++LEP + ++ L+N+YA V W+ A +VR MK+KG+K PGC
Sbjct: 507 VHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGC 566
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
S IE+ V++ F AED +++ EI ++ ++ Q+K+ GYVP E ++D
Sbjct: 567 SLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLD 617
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 145/288 (50%), Gaps = 1/288 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + ++H ++ D + C + + G L ++ GF ++ +V ++LI +
Sbjct: 109 ILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHM 168
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+ C + A +VF+EM RNV +W ++ A + + + ++L+ M + ++ T
Sbjct: 169 YANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTL 228
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+L+AC L G + G + SL+ MY KCG V+ A +F+ M
Sbjct: 229 VSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDR 288
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+V+W++MI+GY+Q A+DLF EM K + P+ IT + ++SSC G +E GK
Sbjct: 289 RDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWV 348
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ K +K + + ++D + G +E + + +MP+ N + W
Sbjct: 349 HFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPV-KNVLSW 395
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F ++ + ++ +I F + + L++ M + ++P++FTF IL C+
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
AL +G H ++ GF S+ V N+LI MY CG VE A VF+ M +++ +WNSM
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
AGY + G + LF EM++ ++ D +T + V+++C +E G+ + + GL
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K + +VD+ + G ++ AR QM + V W A
Sbjct: 257 KGNPTLITSLVDMYAKCGQVDTARRLFDQMD-RRDVVAWSA 296
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 17/184 (9%)
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
AV +F + D ++N MI G+ AI LF+EM + V+PD TF ++ C
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI--------- 400
+ EG+ + K G + ++ + G +E AR +M
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196
Query: 401 ---YPNAVIWEAAESRL--LLEPECAATHVQLAN-LYAGVRCWD--QAARVRKLMKDKGL 452
Y + WE +LE + V L + L A R D + + +++KGL
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256
Query: 453 KTNP 456
K NP
Sbjct: 257 KGNP 260
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 232/405 (57%), Gaps = 18/405 (4%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + + K S S+ + +C S+ + G + +G+ + VG++LI
Sbjct: 671 KAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALI 730
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
+ YSK + DA KVF++MP R+++SW +IA +AQ L+ M+ + N F
Sbjct: 731 SAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKF 790
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+F SIL+AC+ AL +G+ H + ++ ++V +LISMY KCG++EEA VF+N
Sbjct: 791 SFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNF 850
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
K++V+WN+MI YAQHGLA +A+D F M K+ +KPD TF ++S+C H GLV EG
Sbjct: 851 TEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGN 910
Query: 358 VYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-------- 408
F S+ ++HGL P ++HY C+V LLGRAG +EA I QMP P+A +WE
Sbjct: 911 RIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRI 970
Query: 409 ---------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
AA + L L A +V L+N+YA WD A++R++M+ +G++ PG S
Sbjct: 971 HGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 1030
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
WIE+ N+++ F A D+S+ +EI L L +M+ GY P+
Sbjct: 1031 WIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQ 1075
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 167/293 (56%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++ + + + ++ + + + +C +++ + G G ++V +G+SL
Sbjct: 367 EEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSL 426
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I++Y++C + A ++F MP R+++SW AIIA +A+ ++LY+ M++ ++P
Sbjct: 427 ISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGR 486
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF +LSACT S A G+ H +R G S +AN+L++MY +CG++ EA VF
Sbjct: 487 VTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEG 546
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+DI+SWNSMIAG+AQHG A LF EM K+ ++PD ITF V+ C++ +E G
Sbjct: 547 TRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELG 606
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + + GL+ +++ + ++++ R G L++A + + + N + W A
Sbjct: 607 RQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR-HRNVMSWTA 658
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 192/389 (49%), Gaps = 19/389 (4%)
Query: 37 KQISSSKSLHKALRVLDIISPRTRDSTKTE---VHLRLIQDFLQTDSKHLDSQKFNHDFT 93
KQ+ S + L ++S T S ++ +H +++ ++++ HL + N +
Sbjct: 475 KQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNG-HLANALMNM-YR 532
Query: 94 GTNSTFGSSNVFDQLLDTPVVDVEKLISMHH-------------DLHRERLKVDASFLST 140
S + NVF+ ++ +I+ H ++ +E L+ D ++
Sbjct: 533 RCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFAS 592
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
+ C + + G L I +G +V +G++LI +Y +C + DAY+VF + RN
Sbjct: 593 VLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRN 652
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V+SWTA+I FA + + EL+ M+N +P TF+SIL AC S L +G+
Sbjct: 653 VMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIA 712
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
+ G+ V N+LIS Y K G++ +A VF+ M +DI+SWN MIAGYAQ+GL
Sbjct: 713 HILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGT 772
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
A+ +M +Q V + +F+ ++++C +EEGK + K ++ ++ + ++
Sbjct: 773 ALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALIS 832
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + G LEEA++ N V W A
Sbjct: 833 MYAKCGSLEEAQEVFDNF-TEKNVVTWNA 860
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 138/237 (58%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
LA+ G +++ VG++L T++ +C + A + E R+VV + A+IAA AQ +
Sbjct: 309 LAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEE 368
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
E Y MR+ + N T+ S+L+AC+ S ALG G H +G S +Q+ NSLIS
Sbjct: 369 AFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLIS 428
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY +CG++ A +FN M +D++SWN++IAGYA+ A+ L+++M + VKP +T
Sbjct: 429 MYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVT 488
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
FL ++S+C + +GK+ + + + G+K + ++++ R G + EA++ +
Sbjct: 489 FLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFE 545
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 136/255 (53%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
V +C R++ + G ++++ + LI +Y KCR + DA++VF +MP R+V
Sbjct: 89 VQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDV 148
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
+SW ++I+ +AQ+ +L+ M+ + P+ T+ SIL+AC L G+ H +
Sbjct: 149 ISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSK 208
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
I G+ +V NSL++MY KC ++ A VF+ ++ +D+VS+N+M+ YAQ
Sbjct: 209 IIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEEC 268
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
I LF +M + + PD +T++ ++ + +++EGK GL ++ + + +
Sbjct: 269 IGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATM 328
Query: 382 LGRAGLLEEARDFIK 396
R G + A+ ++
Sbjct: 329 FVRCGDVAGAKQALE 343
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 134/269 (49%), Gaps = 4/269 (1%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+T+C S + G I G+ + V +SL+ +Y KC + A +VF + R+V
Sbjct: 190 LTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDV 249
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VS+ ++ +AQ+ V+ C+ L+ M + + P+ T+ ++L A T L +G+ H
Sbjct: 250 VSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKL 309
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
+ G S I+V +L +M+ +CG+V A +D+V +N++IA AQHG A
Sbjct: 310 AVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEA 369
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ + +M V + T+L V+++C + G++ +++ G ++ + ++ +
Sbjct: 370 FEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISM 429
Query: 382 LGRAGLLEEARDFIKQMP----IYPNAVI 406
R G L AR+ MP I NA+I
Sbjct: 430 YARCGDLPRARELFNTMPKRDLISWNAII 458
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 17/240 (7%)
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
E N + ++ CT +L + + H Q + G I ++N LI+MY KC +V +A
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF M +D++SWNS+I+ YAQ G +A LFEEM P IT++ ++++C
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI----KQMPIYPNAVIWE 408
+E GK + + G + + + ++++ G+ L AR ++ + N ++
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGL 258
Query: 409 AAESRLLLE-------------PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A+ + E P T++ L + + D+ R+ KL ++GL ++
Sbjct: 259 YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSD 318
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 241/416 (57%), Gaps = 20/416 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S+ + E + + + LST + S S + I+ ++I++G ++ YV +SL+
Sbjct: 370 VSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDT 429
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC I +A K+FEE ++V++T++I A++Q + L+LY M+++ ++P+ F
Sbjct: 430 YGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFIC 489
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S+L+AC A QG+ H I+ GF I +NSL++MY KCG++E+A F+ +
Sbjct: 490 SSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPN 549
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+ IVSW++MI GYAQHG A+ LF +M++ V P+ IT + V+ +C H GLV EGK Y
Sbjct: 550 RGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQY 609
Query: 360 FDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F+ M G+KP +HY+C++DLLGR+G L EA + + +P + +W
Sbjct: 610 FEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHK 669
Query: 408 ------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
+AA+ LEPE + THV LAN+YA W+ A+VRK MKD +K PG SWI
Sbjct: 670 NIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWI 729
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY--VPEVHEEKVDDASHKR 515
EI + VY F D+S++R EI LD L D + GY + E+ VD + ++
Sbjct: 730 EIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEK 785
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 1/294 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
VE+ + + +++ +K + + + +C R++ G +A+ TGF ++ +V ++
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
L+ +Y+KC ++ D+ ++F + RNVVSW A+ + + Q + L++ M S + PN
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+F+ + IL+AC G GR H ++MG AN+L+ MY K G +E AV VF
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
++ D+VSWN++IAG H A+ L +EM +P+ T + +C G E
Sbjct: 243 DIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKEL 302
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ S+ K +L +VD+ + ++++AR MP + + W A
Sbjct: 303 GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNA 355
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 141/252 (55%), Gaps = 9/252 (3%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+ GF + + + L+TLYSKCR A K+ +E +VVSW+++++ + Q V+ L
Sbjct: 8 IKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEAL 67
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
++ M ++ N+FTF S+L AC+ L GR H + GF S VAN+L+ MY
Sbjct: 68 LVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMY 127
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG ++++ +F + +++VSWN++ + Y Q L A+ LF+EM++ + P+ +
Sbjct: 128 AKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSIS 187
Query: 342 GVISSCRHGGLVEE--GKVYFDSMAKHGLKPELDHYS--CVVDLLGRAGLLEEARDFIKQ 397
++++C GL E G+ M K GL +LD +S +VD+ +AG +E A +
Sbjct: 188 IILNAC--AGLQEGDLGRKIHGLMLKMGL--DLDQFSANALVDMYSKAGEIEGAVAVFQD 243
Query: 398 MPIYPNAVIWEA 409
+ +P+ V W A
Sbjct: 244 IA-HPDVVSWNA 254
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 126/260 (48%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S + +C + G L ++ G + + ++L+ +YSK I A VF+++
Sbjct: 186 ISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA 245
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VVSW AIIA D+ L L M+ S PN FT +S L AC G GR
Sbjct: 246 HPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQ 305
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+M S + A L+ MY KC +++A +++M KDI++WN++I+GY+Q G
Sbjct: 306 LHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGD 365
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ A+ LF +M + + + T V+ S ++ K K G+ + +
Sbjct: 366 HLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINS 425
Query: 378 VVDLLGRAGLLEEARDFIKQ 397
++D G+ ++EA ++
Sbjct: 426 LLDTYGKCNHIDEASKIFEE 445
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H I+ GF + N L+++Y KC A + + D+VSW+S+++GY Q+G
Sbjct: 4 HAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFV 63
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A+ +F EM VK + TF V+ +C + G+ G + + + +
Sbjct: 64 EEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTL 123
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
V + + GLL+++R + + N V W A
Sbjct: 124 VVMYAKCGLLDDSRRLFGGI-VERNVVSWNA 153
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 256/450 (56%), Gaps = 31/450 (6%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFL 138
+T N +FDQ++ ++ +IS + +++R K D
Sbjct: 297 YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFAC 356
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ +TSCGS + G I+ ++ +V + LI +Y+K ++IDA KVF+ M
Sbjct: 357 TSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAE 416
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+NV+S+ A+I ++ + ++ LEL+ MR + +PN+FTF ++++A + +L G+
Sbjct: 417 QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQF 476
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H Q ++MG V N+L+ MY KCG++EEA +FN+ +D+V WNSMI+ +AQHG A
Sbjct: 477 HNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEA 536
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A+ +F EMMK+ ++P+ +TF+ V+S+C H G VE+G +F+SM G+KP +HY+CV
Sbjct: 537 EEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACV 596
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECA 421
V LLGR+G L EA++FI++MPI P A++W AAE + +P+ +
Sbjct: 597 VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDS 656
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
+++ L+N++A W +VR M + PG SWIE+ N V F A D ++ R +
Sbjct: 657 GSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTH-REA 715
Query: 482 EILPVLDFLVDQMKTLGYVPEVHEEKVDDA 511
+I VLD L+ +K GYVP+ ++D
Sbjct: 716 DIGSVLDILIQHIKGAGYVPDATALLMNDG 745
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 155/309 (50%), Gaps = 14/309 (4%)
Query: 104 VFDQLLDTPVVDVEKLISMHH-------------DLHRERLKVDASF-LSTAVTSCGSTR 149
VFD++ ++ ++SM+ DL R+ + F L++ + +C
Sbjct: 106 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 165
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+ GA +R+GF +VYVG+SLI YSK I +A VF+++ + V+WT IIA
Sbjct: 166 VVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIA 225
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ + + + LEL+ MR + + P+ + +S+LSAC+ L G+ H +R G
Sbjct: 226 GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM 285
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ V N LI Y KC V+ +F+ M K+I+SW +MI+GY Q+ A+ LF EM
Sbjct: 286 DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMN 345
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
+ KPD V++SC +E+G+ K L+ + + ++D+ ++ LL
Sbjct: 346 RLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLI 405
Query: 390 EARDFIKQM 398
+A+ M
Sbjct: 406 DAKKVFDVM 414
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 163/336 (48%), Gaps = 21/336 (6%)
Query: 91 DFTGTNSTFGSSN-VFDQLLDTPVVDVEKLISMHHDLHRERLKV-------------DAS 136
DF N + VFDQL + V +I+ + R + + D
Sbjct: 194 DFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRY 253
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+S+ +++C + GG +R G +V V + LI Y+KC + K+F++M
Sbjct: 254 VVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM 313
Query: 197 PVRNVVSWTAIIAAFAQ---EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
V+N++SWT +I+ + Q +W+ ++L+ M +P+ F TS+L++C AL
Sbjct: 314 VVKNIISWTTMISGYMQNSFDWE---AMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 370
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
QGR H TI+ S V N LI MY K + +A VF+ M ++++S+N+MI GY+
Sbjct: 371 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 430
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
A++LF EM + KP+ TF +I++ + + G+ + + + K GL
Sbjct: 431 SQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPF 490
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD+ + G +EEAR I+ + V W +
Sbjct: 491 VTNALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNS 525
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 133/247 (53%), Gaps = 2/247 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I +G ++ ++ + LI + SK + +A VF++MP +N+++W+++++ ++Q+ + L
Sbjct: 76 IVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEAL 135
Query: 222 ELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++ + R S PN+F S++ ACT G + +G H +R GF + V SLI
Sbjct: 136 MVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDF 195
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K GN+EEA VF+ + K V+W ++IAGY + G + +++LF +M + V PD
Sbjct: 196 YSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVV 255
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
V+S+C +E GK + + G + ++ + ++D + ++ R QM +
Sbjct: 256 SSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM-V 314
Query: 401 YPNAVIW 407
N + W
Sbjct: 315 VKNIISW 321
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
L P F ++L + + H Q I G S +AN LI++ K V+ A
Sbjct: 45 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 104
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK-PDAITFLGVISSCRHG 350
VF+ M K++++W+SM++ Y+Q G + A+ +F ++ ++ + P+ VI +C
Sbjct: 105 VVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQL 164
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G+VE+G + + G ++ + ++D + G +EEAR Q+ AV W
Sbjct: 165 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS-EKTAVTW 220
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 265/482 (54%), Gaps = 35/482 (7%)
Query: 58 RTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVE 117
+ RDS + H +++ L +D +S + +G +S +FD D VV
Sbjct: 116 KLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDF--ASRLFDGAEDKDVVTWT 173
Query: 118 KLI-----------SMHHDLHRERLKVDASFLS--TAVTSCGSTRNIRGGAPYQCLAIRT 164
+I +M + + ++ V A+ ++ + + + G ++R G L + T
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 165 GFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLEL 223
G + +V++GSSL+ +Y KC DA KVF+EMP RNVV+WTA+IA + Q D + +
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 224 YRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
+ M S + PN+ T +S+LSAC GAL +GR HC I+ +LI +Y K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 284 CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
CG +EEA+ VF +H K++ +W +MI G+A HG A A DLF M+ V P+ +TF+ V
Sbjct: 354 CGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 344 ISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
+S+C HGGLVEEG+ F SM + ++P+ DHY+C+VDL GR GLLEEA+ I++MP+ P
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEP 473
Query: 403 NAVIWEA----------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRK 445
V+W A A SR++ L+P + + LANLY+ + WD+ ARVRK
Sbjct: 474 TNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRK 533
Query: 446 LMKDKGLKTNPGCSWIEIMNVVYRFRA-EDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
MKD+ + +PG SWIE+ + F A +DK ++ LD + QM+ + +V
Sbjct: 534 QMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDELEDVT 593
Query: 505 EE 506
E
Sbjct: 594 AE 595
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 256/468 (54%), Gaps = 33/468 (7%)
Query: 71 LIQDFLQTDSKHLDSQKFN-HDFTGTNSTFGS-SNVFDQLLDTPVVDVEKLI------SM 122
L+ + + +LDS D G+++ F S VFD++++ VV L+
Sbjct: 91 LLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGR 150
Query: 123 HHD-------LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
HH+ + RE + D+ LST + +++ G A R GF ++V+VGSS
Sbjct: 151 HHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSS 210
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y+ C + KVF+ +PVR+ + W +++A AQ V+ L ++R M + + P
Sbjct: 211 LIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPV 270
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF+S++ C +L G+ H I GF + +++SLI MYCKCG + A +F+
Sbjct: 271 PVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFD 330
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M D+VSW +MI GYA HG A A+ LFE M KP+ ITFL V+++C H GLV++
Sbjct: 331 KMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDK 390
Query: 356 GKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------- 407
G YF SM+ H G+ P L+H++ + D LGRAG L+EA +FI +M I P A +W
Sbjct: 391 GWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRAC 450
Query: 408 ----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
E A+ + LEP +HV L+N+Y+ W++AA +R+ M+ KG+K +P
Sbjct: 451 RVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPA 510
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
CSWIE+ + ++ F A D+S+ I+ L+ +QM G+VP +
Sbjct: 511 CSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTED 558
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 21/299 (7%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR----- 184
R V AS L A+ SC + GA LAIR+G A+ + ++L+ LY K
Sbjct: 46 RSSVPAS-LPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLD 104
Query: 185 ----VIID----------AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
I+D KVF+EM R+VVSW ++ A+E + L R M
Sbjct: 105 STGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCRE 164
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
P+ FT +++L + +G H R GF S + V +SLI MY C + +
Sbjct: 165 GFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYS 224
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
V VF+N+ +D + WNS++AG AQ+G A+ +F M++ V+P +TF +I C +
Sbjct: 225 VKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNL 284
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ GK + G + + S ++D+ + G + A +M P+ V W A
Sbjct: 285 ASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMS-SPDVVSWTA 342
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 22/227 (9%)
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF--TFTSILSACTGSGALGQGRSAHCQ 261
W I A A E + L+ MR S + + + L +C G G S H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 262 TIRMGFFSYIQVANSLISMYCK--CGNV-----------------EEAVYVFNNMHGKDI 302
IR G F+ AN+L+++YCK C + E VF+ M +D+
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
VSWN+++ G A+ G A+ +M ++ +PD+ T V+ V+ G
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++G ++ S ++D+ + + +P+ + ++W +
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DHILWNS 241
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 233/393 (59%), Gaps = 18/393 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E +D + +T+CG + G IRT + N++VGS+L+ +Y KCR +
Sbjct: 264 EGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKY 323
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF +M +NV+SWTA++ + Q + + ++ M+ + + P+DFT S++S+C
Sbjct: 324 AEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCAN 383
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+L +G H Q + G ++ V+N+LI++Y KCG++E A +F+ M +D VSW ++
Sbjct: 384 LASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTAL 443
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HG 367
++GYAQ G A I LFE M+ + PD +TF+GV+S+C GLVE+G YF+ M K H
Sbjct: 444 VSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHR 503
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
+ P DHY+C++DLL RAG LEEA++FI QMP P+A+ W AA
Sbjct: 504 ITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAA 563
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
ES LEP+ A+++ L+++YA WD A++RK M++ G+K PG SWI+ N V+ F
Sbjct: 564 ESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIF 623
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
A+D+S+ +I L+ L +M GYVP++
Sbjct: 624 SADDRSSPFSDQIYAKLESLYLKMIEEGYVPDM 656
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 170/359 (47%), Gaps = 26/359 (7%)
Query: 75 FLQTDSKHLDSQKFNHDFTGTNSTFG----------SSNVFDQLLDTPVVDVEKL-ISMH 123
+LQ + DS NHD NS S V++ +L V++ ++ S
Sbjct: 86 YLQDMQRVFDSMP-NHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTM 144
Query: 124 HDLHRERLKVD-ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI------------ANV 170
L R VD + + G + G+P + +TGFI N+
Sbjct: 145 LILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNI 204
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
V +++IT +CR I++A ++F+ MP ++ +SWT II Q ++ ++ M
Sbjct: 205 VVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIE 264
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ FTF S+L+AC G AL +G+ H IR + I V ++L+ MYCKC NV+ A
Sbjct: 265 GFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYA 324
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF M K+++SW +M+ GY Q+G + A+ +F +M + + PD T VISSC +
Sbjct: 325 EAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANL 384
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+EEG + GL + + ++ L G+ G LE A +M I + V W A
Sbjct: 385 ASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKI-RDEVSWTA 442
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 116/225 (51%), Gaps = 5/225 (2%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM- 227
N++ ++L++ YSK + D +VF+ MP +VVSW ++++ +A + + +Y MM
Sbjct: 70 NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMML 129
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
++ + N TF+++L + G + GR H Q + G+ SY+ V + L+ MY K G +
Sbjct: 130 KDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFI 189
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+A +F + K+IV +N+MI G + V A LF+ M ++ D+I++ +I+
Sbjct: 190 NDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEK----DSISWTTIITGL 245
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
GL +E F M G + + V+ G L+E +
Sbjct: 246 TQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGK 290
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 143/338 (42%), Gaps = 64/338 (18%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
+++ + A+ C RN C IRT ++ ++LI Y K + +A VF+
Sbjct: 5 SNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFD 64
Query: 195 EMPVRNVVSWTAIIAAFAQ--------------------EWQ-----------VDMCLEL 223
+P N+ SW +++A+++ W + + +
Sbjct: 65 HIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRV 124
Query: 224 YRMM-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
Y MM ++ + N TF+++L + G + GR H Q + G+ SY+ V + L+ MY
Sbjct: 125 YNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYA 184
Query: 283 KCGNVEEA-------------VY------------------VFNNMHGKDIVSWNSMIAG 311
K G + +A VY +F+NM KD +SW ++I G
Sbjct: 185 KTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITG 244
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Q+GL A+D F+EM + D TF V+++C ++EGK + + +
Sbjct: 245 LTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDN 304
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S ++D+ + ++ A ++M + N + W A
Sbjct: 305 IFVGSALLDMYCKCRNVKYAEAVFRKMR-HKNVISWTA 341
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 236/396 (59%), Gaps = 18/396 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E + +D + +T+CG+ + G RT + NV+VGS+L+ +YSKCR
Sbjct: 268 MRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRS 327
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A VF M +N++SWTA+I + Q + + ++ M+ ++P+DFT S++S+
Sbjct: 328 VRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISS 387
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C +L +G HC + G Y+ V+N+L+++Y KCG++E+A +F+ M D VSW
Sbjct: 388 CANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 447
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+++ GYAQ G A IDLFE+M+ + VKPD +TF+GV+S+C GLV++G+ YF SM +
Sbjct: 448 TALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQ 507
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------------- 408
H + P DHY+C++DL R+G L++A +FIKQMP P+A W
Sbjct: 508 DHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGK 567
Query: 409 -AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
AAE+ L L+P+ A++V L +++A W+ A++R+ M+D+ +K PGCSWI+ N V
Sbjct: 568 WAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKV 627
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ F A+D+S+ I L +L +M GY P+V
Sbjct: 628 HIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDV 663
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 137/287 (47%), Gaps = 32/287 (11%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV----------- 202
G C +R GF A + GS L+ +Y+K I DA +VF+EM +NVV
Sbjct: 164 GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLR 223
Query: 203 --------------------SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
+WT ++ Q L+++R MR + + +TF SI
Sbjct: 224 CKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSI 283
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
L+AC AL +G+ H R + + V ++L+ MY KC +V A VF M K+I
Sbjct: 284 LTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNI 343
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
+SW +MI GY Q+G A+ +F EM + +KPD T VISSC + +EEG +
Sbjct: 344 ISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 403
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GL+P + + +V L G+ G +E+A +M + + V W A
Sbjct: 404 ALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTA 449
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 142/320 (44%), Gaps = 51/320 (15%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMM 227
N+ G+SL++ ++ ++ D ++F +P R+ VS+ A++A F++ Y ++
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 228 RN-SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
R+ + + P+ T + ++ + G GR HCQ +R+GF +Y + L+ MY K G
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195
Query: 287 VEEAVYVFNNMHGKDIV-------------------------------SWNSMIAGYAQH 315
+ +A VF+ M GK++V +W +M+ G Q+
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
GL A+D+F M + V D TF ++++C +EEGK + + + +
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG 315
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVR 435
S +VD+ + + A ++M ++ N + W A + Y
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRM-MWKNIISWTA-----------------MIVGYGQNG 357
Query: 436 CWDQAARVRKLMKDKGLKTN 455
C ++A RV M+ G+K +
Sbjct: 358 CGEEAVRVFSEMQRDGIKPD 377
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 233/404 (57%), Gaps = 18/404 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
++M ++ LK D+ LS+ + +I G +IR G A VYV SSLI +
Sbjct: 285 LTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDM 344
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC ++D+Y+VF + R+ +SW +IIA Q D L+ +R M + ++P ++F
Sbjct: 345 YAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSF 404
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+SI+ AC L G+ H R GF I +A+SL+ MY KCGN+ A +F+ M
Sbjct: 405 SSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRL 464
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+VSW +MI G A HG A+ AI+LFE+M + ++P+ + F+ V+++C H GLV+E Y
Sbjct: 465 RDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKY 524
Query: 360 FDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F+SM G+ P ++HY+ V DLLGRAG LEEA DFI MPI P +W
Sbjct: 525 FNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHK 584
Query: 408 -----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
E +R+L ++P+ ++ LAN+Y+ R W +AA+ R ++ G++ P CSWI
Sbjct: 585 NVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWI 644
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
E+ N VY F A D+S+ +I ++ L++ M+ GYVP+ E
Sbjct: 645 EVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSE 688
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+FE MP +++VSW IIA A+ L + R M + L+P+ FT +S+L +
Sbjct: 255 KIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENV 314
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ +G+ H +IR G + + VA+SLI MY KC V ++ VF + +D +SWNS+IA
Sbjct: 315 DISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIA 374
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G Q+GL + F +M+ ++KP + +F ++ +C H + GK + ++G
Sbjct: 375 GCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 434
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S +VD+ + G + AR +M + + V W A
Sbjct: 435 NIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTA 472
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 108/268 (40%), Gaps = 38/268 (14%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI---- 186
L D + + + +C ++ G IR G ++Y G++L+ +YSK R +
Sbjct: 104 LYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSG 163
Query: 187 ---IDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ A +V +EM R TA + Q +V S +E ++ +
Sbjct: 164 RQRLGASQVLDEMTERTRSVRTASVLVGNQGRKV------------SDIEAFNYDVSC-- 209
Query: 244 SACTGSGALGQGRSAHCQTIRMGF-----FSYIQVAN--SLISMYCKCGNVEEAVYVFNN 296
+ R Q + + + + ++ N I +V+ +F
Sbjct: 210 ----------RSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEM 259
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M KD+VSWN++IAG A++GL + + EM +KPD+ T V+ + +G
Sbjct: 260 MPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKG 319
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGR 384
K + GL E+ S ++D+ +
Sbjct: 320 KEIHGCSIRQGLDAEVYVASSLIDMYAK 347
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+YS ++ D+ ++F + ++W ++I + L + M S L P+
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
F S+L AC L G S H IR+G + N+L++MY K
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSK 155
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
+Y + +++ +FN +H ++W S+I Y HGL +++ F M+ + PD
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 340 FLGVISSC 347
F V+ +C
Sbjct: 111 FPSVLKAC 118
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/380 (40%), Positives = 228/380 (60%), Gaps = 49/380 (12%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI------------------------ 207
V ++LITLY++C +++A +VF++MPV+++VSW AI
Sbjct: 315 VNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRS 374
Query: 208 -------IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
I+ AQ + L+L+ M+ LEP D+ + +++C+ G+L G+ H
Sbjct: 375 LLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHS 434
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
Q I++G S + V N+LI+MY +CG VE A VF M D VSWN+MIA AQHG V+
Sbjct: 435 QIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQ 494
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVV 379
AI L+E+M+K+ + PD ITFL ++S+C H GLV+EG+ YFD+M +G+ PE DHYS ++
Sbjct: 495 AIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLI 554
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA----------------AESRLL-LEPECAA 422
DLL RAG+ EA++ + MP P A IWEA A RLL L P+
Sbjct: 555 DLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDG 614
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
T++ L+N+YA + WD+ ARVRKLM+++G+K PGCSWIE+ N+V+ F +D + +
Sbjct: 615 TYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHA 674
Query: 483 ILPVLDFLVDQMKTLGYVPE 502
+ L+ LV +M+ LGYVP+
Sbjct: 675 VYRYLEQLVHEMRKLGYVPD 694
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 38/272 (13%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++I Y + ++ A ++ E M V+W A+I+ + + +L R M + ++
Sbjct: 212 TTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQ 271
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRM-----GFFSYIQVANSLISMYCKCGNVE 288
+++T+TS++SA + +G GR H +R G F + V N+LI++Y +CG +
Sbjct: 272 LDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHF-VLSVNNALITLYTRCGKLV 330
Query: 289 EAVYVFNNMHGKDIVSWNS-------------------------------MIAGYAQHGL 317
EA VF+ M KD+VSWN+ MI+G AQ+G
Sbjct: 331 EARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGF 390
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ LF +M + ++P + G I+SC G ++ G+ + + G L +
Sbjct: 391 GEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNA 450
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + R GL+E A MP Y ++V W A
Sbjct: 451 LITMYSRCGLVEAADTVFLTMP-YVDSVSWNA 481
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ A+ SC ++ G I+ G +++ VG++LIT+YS+C ++ A VF MP
Sbjct: 414 AGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPY 473
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+ VSW A+IAA AQ ++LY M + P+ TF +ILSAC+ +G + +GR
Sbjct: 474 VDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRH- 532
Query: 259 HCQTIRM--GFFSYIQVANSLISMYCKCGNVEEAVYVFNNM---HGKDIVSWNSMIAGYA 313
+ T+R+ G + LI + C+ G EA V +M G I W +++AG
Sbjct: 533 YFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPI--WEALLAGCW 590
Query: 314 QHG---LAVRAIDLFEEMMKQR 332
HG L ++A D E+M Q+
Sbjct: 591 IHGNMELGIQAADRLLELMPQQ 612
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 123/290 (42%), Gaps = 50/290 (17%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
++ +++++ YS I A+++F P +R+ VS+ A+I AF+ L+L+
Sbjct: 61 DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120
Query: 227 MRNSMLEPNDFTFTSILSACTG-SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC- 284
M+ P+ FTF+S+L A + + + HC+ + G S V N+L+S Y C
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180
Query: 285 -----------------------GNVEE-------AVYVFNN-----------MHGKDIV 303
G +E A YV N+ M V
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAV 240
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+WN+MI+GY G A DL M ++ D T+ VIS+ + GL G+ +
Sbjct: 241 AWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYV 300
Query: 364 AKHGLKPE----LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++P L + ++ L R G L EAR +MP+ + V W A
Sbjct: 301 LRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPV-KDLVSWNA 349
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
R+ H + GF + + N LI YCK N+ A Y+F+ + DIV+ +M++ Y+
Sbjct: 15 ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74
Query: 315 HGLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
G A LF M R D +++ +I++ H F M + G P+
Sbjct: 75 AGNIKLAHQLFNATPMSIR---DTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPF 131
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQM 398
+S V LG L+ + +Q+
Sbjct: 132 TFSSV---LGALSLIADEETHCQQL 153
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/430 (37%), Positives = 246/430 (57%), Gaps = 52/430 (12%)
Query: 125 DLHRE-RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+LHR + D+SF ++A+++C + ++ G LAI+TG N YV + LI++Y+KC
Sbjct: 545 ELHRSGSVPSDSSF-TSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKC 603
Query: 184 -------------------------------RVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
++ DA VFE+MP R+VVSWTAII+A+
Sbjct: 604 GNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYV 663
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
Q ++ L+L+ M ++PN T TS+LSAC GA+ G H ++GF +++
Sbjct: 664 QAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLF 723
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V NSLI+MY KCG E+ VF M D+++WN+++ G AQ+GL AI +FE+M +
Sbjct: 724 VGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEG 782
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ PD ++FLGV+ +C H GLV+EG +F+SM K+G+ P + HY+C+VDLLGRAG L EA
Sbjct: 783 ILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEA 842
Query: 392 RDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGV 434
I+ MP+ P++VIWEA AE + +AT+V L+NL+A
Sbjct: 843 EALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQ 902
Query: 435 RCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
WD+ A +RKLMKD+GL PG SWI++ N ++ F D+++ ++ EI L
Sbjct: 903 GMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCF 962
Query: 495 KTLGYVPEVH 504
+ GY+P+ +
Sbjct: 963 RATGYMPDTN 972
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 123/228 (53%), Gaps = 8/228 (3%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV +++I Y++ ++ +A +F++MPV+N SW A+IA F Q + LEL +
Sbjct: 488 NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELH 547
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG--FFSYIQVANSLISMYCKCGN 286
S P+D +FTS LSAC G + GR H I+ G F SY V N LISMY KCGN
Sbjct: 548 RSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSY--VMNGLISMYAKCGN 605
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
VE+ +VF + KD VSWNS+I+G +++ + A +FE+M K+ D +++ +IS+
Sbjct: 606 VEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKR----DVVSWTAIISA 661
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
G E F M G+KP + ++ G G ++ F
Sbjct: 662 YVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQF 709
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 127/241 (52%), Gaps = 9/241 (3%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV +S++T Y C + +A ++F++MP RN VSW +I+ + +++ M
Sbjct: 294 NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMC 353
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
++ P+ F +LSA TG L S I+ G+ + V +++++ Y + G+++
Sbjct: 354 RTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLD 413
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A++ F M ++ SW +MIA +AQ G AI L+E + +Q V T ++++
Sbjct: 414 LAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYA 469
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
G +++ ++ FD + L P + ++ ++ + G+L+EA+D ++MP+ N+ W
Sbjct: 470 QVGRIQKARLIFDEI----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPV-KNSASWA 524
Query: 409 A 409
A
Sbjct: 525 A 525
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 130/255 (50%), Gaps = 9/255 (3%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
+AI+TG+ +V VGS+++ Y++ + A FE MP RN SWT +IAAFAQ ++D
Sbjct: 386 IAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDD 445
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
++LY + + T T++++A G + + R + + ++ N++I+
Sbjct: 446 AIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEILNPNVVAW----NAIIA 497
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
Y + G ++EA +F M K+ SW +MIAG+ Q+ + A++L E+ + P +
Sbjct: 498 GYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSS 557
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
F +S+C + G VE G+V K G + + ++ + + G +E+ + +
Sbjct: 558 FTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIR 617
Query: 400 IYPNAVIWEAAESRL 414
+ + V W + S L
Sbjct: 618 V-KDTVSWNSLISGL 631
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 109/226 (48%), Gaps = 8/226 (3%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S+I YS+ + +A +F+ +N+ +WT ++ +A+E +++ E++ SM E
Sbjct: 206 NSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFE----SMTE 261
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
N ++ +++S +G L R + S+ NS+++ YC C + EA +
Sbjct: 262 RNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASW----NSVVTGYCHCYRMSEAREL 317
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M ++ VSW MI+GY A D+F +M + +PD F+ V+S+ +
Sbjct: 318 FDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDL 377
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
E K G + ++ S +++ R G L+ A F + MP
Sbjct: 378 ELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP 423
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 49/196 (25%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+A +VF EM R+VVSW ++I ++Q +VD R++ ++ + N T+T +L+
Sbjct: 189 EARRVFNEMIQRDVVSWNSMINGYSQNGKVDEA----RLLFDAFVGKNIRTWTILLTG-- 242
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
Y K G +EEA VF +M +++VSWN+
Sbjct: 243 ---------------------------------YAKEGRIEEAREVFESMTERNVVSWNA 269
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI+GY Q+G A LF+EM ++ V ++ V++ H + E + FD M
Sbjct: 270 MISGYVQNGDLKNARKLFDEMPEKNVA----SWNSVVTGYCHCYRMSEARELFDQM---- 321
Query: 368 LKPELDHYSCVVDLLG 383
PE + S +V + G
Sbjct: 322 --PERNSVSWMVMISG 335
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N+ I + G VEEA VFN M +D+VSWNSMI GY+Q+G A LF+ + + ++
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
I G G +EE + F+SM + + ++ ++ + G L+ AR
Sbjct: 235 TWTILLTGYAKE----GRIEEAREVFESMTERNVVS----WNAMISGYVQNGDLKNARKL 286
Query: 395 IKQMP 399
+MP
Sbjct: 287 FDEMP 291
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 240/426 (56%), Gaps = 23/426 (5%)
Query: 114 VDVEKLISMHHDLHR---ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV 170
VD +L H HR E + D + +T +++C + G A + G +++V
Sbjct: 307 VDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDV 366
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
G++LI +YSK + DA +VF+ MP R+VVSWT ++ +A QV ++ M
Sbjct: 367 RFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQ 426
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
++ N T+ +L AC+ AL G+ H + ++ G + + V N+L+SMY KCG+VE+A
Sbjct: 427 GVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDA 486
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+ VF M +D+V+WN++I G Q+G + A+ +E M + ++P+A TF+ V+S+CR
Sbjct: 487 IRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVC 546
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-- 407
LVEEG+ F M+K +G+ P HY+C+VD+L RAG L EA D I +P+ P+A +W
Sbjct: 547 NLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGA 606
Query: 408 ---------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
AAE L LEP+ A +V L+ +YA W A++RK MK++G+
Sbjct: 607 LLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGV 666
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH--EEKVDD 510
K PG SWIEI V+ F A D+S+ R EI L+ L QMK+LGYVP+ +DD
Sbjct: 667 KKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDD 726
Query: 511 ASHKRT 516
+R
Sbjct: 727 EGKERA 732
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 151/282 (53%), Gaps = 1/282 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
LHR+ +VD+ + SC +++ G +R G NVY+ ++L+ LY+ C
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ +A ++F++ ++VVSW +I+ +A L+ +M+ LEP+ FTF SILSA
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C+ L GR H + + G + V N+LISMY KCG+V +A VF+ M +D VSW
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 198
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
++ YA+ G ++ + M+++RV+P IT++ V+S+C +E+GK + +
Sbjct: 199 TTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVE 258
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ + + + + G ++AR+ + + Y + + W
Sbjct: 259 SEYHSDVRVSTALTKMYMKCGAFKDAREVFECLS-YRDVIAW 299
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 146/274 (53%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ +ERL+ D + +++C S + G + G + VG++LI++Y+KC
Sbjct: 120 MQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGS 179
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA +VF+ M R+ VSWT + A+A+ + L+ Y M + P+ T+ ++LSA
Sbjct: 180 VRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSA 239
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C AL +G+ H + + S ++V+ +L MY KCG ++A VF + +D+++W
Sbjct: 240 CGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAW 299
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI G+ G A F M+++ V PD T+ V+S+C G + GK AK
Sbjct: 300 NTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAK 359
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
GL ++ + ++++ +AG +++AR +MP
Sbjct: 360 DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 393
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 154/291 (52%), Gaps = 1/291 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + +H + +ER++ +++CGS + G + + + ++V V ++L
Sbjct: 212 EESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTAL 271
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+Y KC DA +VFE + R+V++W +I F Q++ + M + P+
Sbjct: 272 TKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDR 331
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T+T++LSAC G L +G+ H + + G S ++ N+LI+MY K G++++A VF+
Sbjct: 332 ATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDR 391
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D+VSW +++ YA V + F++M++Q VK + IT++ V+ +C + ++ G
Sbjct: 392 MPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWG 451
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K + K GL +L + ++ + + G +E+A + M + + V W
Sbjct: 452 KEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTW 501
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 218/347 (62%), Gaps = 18/347 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++++ Y + I +A +F EMP RNV++WT +I+ AQ + L+L+ M++ LE
Sbjct: 361 NAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLE 420
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P D+ F ++AC+ G+L G+ H Q IR+G S + N+LI+MY +CG VE A V
Sbjct: 421 PCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESV 480
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M D VSWN+MIA AQHG V+AI+LFE+MMK+ + PD ITFL ++++C H GL+
Sbjct: 481 FLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLI 540
Query: 354 EEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--- 409
+EG+ YFD+M ++G+ P DHY+ ++DLL RAG+ +A+ IK MP A IWEA
Sbjct: 541 KEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLA 600
Query: 410 -------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A RLL L P T++ L+N+YA + WD+ ARVR LM+++G+K
Sbjct: 601 GCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKE 660
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PGCSW+E+ N+V+ F +D + + + L LV++MK LGYVP+
Sbjct: 661 PGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPD 707
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 125/276 (45%), Gaps = 42/276 (15%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++I Y + ++ A ++ + + V+W A+I+ + + + + +R M + ++
Sbjct: 221 TTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQ 280
Query: 234 PNDFTFTSILSACTGS-----GALGQGRSAHCQTIRM----GFFSYIQVANSLISMYCKC 284
+++T+TS++SAC GS G GR H +R + V N+LI+ Y K
Sbjct: 281 EDEYTYTSLISAC-GSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKY 339
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGY-------------------------------A 313
+ EA VF+ M +DI+SWN++++GY A
Sbjct: 340 DRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLA 399
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q+G + LF +M + ++P F G I++C G ++ G+ + + G L
Sbjct: 400 QNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLS 459
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++ + R G++E A MP Y ++V W A
Sbjct: 460 AGNALITMYSRCGVVESAESVFLTMP-YVDSVSWNA 494
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 9/220 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + + E L+ + A+T+C ++ G IR G + + G++L
Sbjct: 405 EEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNAL 464
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
IT+YS+C V+ A VF MP + VSW A+IAA AQ +EL+ M + P+
Sbjct: 465 ITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDR 524
Query: 237 FTFTSILSACTGSGALGQGRSAH-CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF +IL+AC +G + +GR R G LI + C+ G +A V
Sbjct: 525 ITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIK 584
Query: 296 NM---HGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEMM 329
+M G I W +++AG HG L ++A D E++
Sbjct: 585 SMPFEAGAPI--WEALLAGCRIHGNMELGIQAADRLLELI 622
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 129/335 (38%), Gaps = 85/335 (25%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP------------------------ 197
+ +GF N ++ + LI +Y K I A K+F+++P
Sbjct: 32 LTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQ 91
Query: 198 ---------VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
+R+ VS+ A+I A++ L L+ M+ P+ FTF+S+LSA +
Sbjct: 92 QLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSL 151
Query: 249 -SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN---------VEEAVYVFNNMH 298
+ + HC+ I++G V N+L+S Y C + + A VF+
Sbjct: 152 IADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETP 211
Query: 299 GKDI---------------------------------VSWNSMIAGYAQHGLAVRAIDLF 325
I V+WN+MI+GY + GL A D F
Sbjct: 212 KNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTF 271
Query: 326 EEMMKQRVKPDAITFLGVISSC----RHGGLVEEGKVYFDSMAKHGLKPE----LDHYSC 377
M ++ D T+ +IS+C G+ G+ + + ++P L +
Sbjct: 272 RRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNA 331
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
++ + + EAR +MP+ + + W A S
Sbjct: 332 LITFYTKYDRMIEARRVFDKMPV-RDIISWNAVLS 365
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
R+ H + GF + N LI++YCK N+ A +F+ + DIV+ ++++ Y+
Sbjct: 24 ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
G A LF D +++ +I++ HG F M ++G P+
Sbjct: 84 SGNVKLAQQLFNA--TPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFT 141
Query: 375 YSCVVDLL 382
+S V+ L
Sbjct: 142 FSSVLSAL 149
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 245/413 (59%), Gaps = 19/413 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+E + S+ ++++E L+ + + LST + S ++ ++I++G+ + YV +
Sbjct: 371 DIEAM-SLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVAN 429
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL+ Y KC ++ DA KVFE P ++V++T++I A++Q + L++Y M++ ++P
Sbjct: 430 SLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKP 489
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ F F+S+ +AC A QG+ H ++ G S + NSL++MY KCG++++A +F
Sbjct: 490 DAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIF 549
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
N + + IVSW++MI G AQHG +A+ LF +M+K + P+ IT + V+S+C H GLV
Sbjct: 550 NEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVT 609
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
E + +F M K G+ P +HY+C+VD+LGR G L+EA +K+MP +A +W
Sbjct: 610 EARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGA 669
Query: 408 -----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AAE L LEPE + TH+ LAN+YA WD A+VR+ MK+ +K P
Sbjct: 670 ARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEP 729
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
G SWIE+ + VY F D+S+ R EI LD L +++ + GYVP + + D
Sbjct: 730 GMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHD 782
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 141/272 (51%), Gaps = 1/272 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+A+ +C + ++ G ++ + +VG LI +YSKC ++ DA VF+ MP
Sbjct: 292 LSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMP 351
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++V+ W +II+ ++ + L+ M LE N T ++IL + GS A G
Sbjct: 352 XKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQ 411
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +I+ G+ VANSL+ Y KC +E+A VF +D+V++ SMI Y+Q+GL
Sbjct: 412 VHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGL 471
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ ++ M + +KPDA F + ++C + E+GK + K GL ++ +
Sbjct: 472 GEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNS 531
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+V++ + G +++A ++ + V W A
Sbjct: 532 LVNMYAKCGSIDDASCIFNEIS-WRGIVSWSA 562
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 6/265 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LST + +C + G I+ G+ ++ + ++L+ +Y+K A VF E+P
Sbjct: 191 LSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIP 250
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++VSW A+IA + D+ L+L M + + P+ FT +S L AC G + GR
Sbjct: 251 KPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQ 310
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++M V LI MY KCG +++A VF+ M KD++ WNS+I+GY+ G
Sbjct: 311 LHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGY 370
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSC---RHGGLVEEGKVYFDSMAKHGLKPELDH 374
+ A+ LF M K+ ++ + T ++ S + G E+ V+ S+ K G + +
Sbjct: 371 DIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQ--VHTISI-KSGYQYDGYV 427
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMP 399
+ ++D G+ LLE+A + P
Sbjct: 428 ANSLLDSYGKCCLLEDAAKVFEVCP 452
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 41/273 (15%)
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL----ELYRM------ 226
+ LYSKC+ A K+ + ++VSW+A+I+ + Q + + L E+Y +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 227 ------------------------------MRNSMLEPNDFTFTSILSACTGSGALGQGR 256
M ++ + PN+F+ +++L+AC G G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H I++G+ S AN+L+ MY K G E A+ VF + DIVSWN++IAG H
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
A+ L +M RV P T + +C GLV+ G+ ++ K ++P+
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ + GLL++AR MP + ++W +
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPX-KDVIVWNS 360
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 260/481 (54%), Gaps = 30/481 (6%)
Query: 63 TKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVD------- 115
+K HL + +F Q ++H + K++ F V D + V+
Sbjct: 122 SKFHPHLSPLHEFPQ--ARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGM 179
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
E+ ++M ++ +E L+ D+ LS+ + N+ G AIR GF +V++GSS
Sbjct: 180 YEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSS 239
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y+KC + + F + R+ +SW +IIA Q + D L +R M ++P
Sbjct: 240 LIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPM 299
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+F+S++ AC AL G+ H IR+GF +A+SL+ MY KCGN++ A Y+FN
Sbjct: 300 QVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFN 359
Query: 296 N--MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
M +D+VSW ++I G A HG A+ A+ LFEEM+ VKP + F+ V+++C H GLV
Sbjct: 360 KIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLV 419
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----- 407
+EG YF+SM + G+ P L+HY+ V DLLGRAG LEEA DFI M P +W
Sbjct: 420 DEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLA 479
Query: 408 --------EAAESR----LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
E AE LL++P HV ++N+Y+ + W AA++R M+ GLK
Sbjct: 480 ACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKT 539
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD-DASHK 514
P CSWIE+ N V+ F A DKS+ +I L+ L++QM+ GYV + +E D D HK
Sbjct: 540 PACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHK 599
Query: 515 R 515
R
Sbjct: 600 R 600
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 128/253 (50%), Gaps = 22/253 (8%)
Query: 162 IRTGFIANVYVGSSLITLYSKCR---------------------VIIDAY-KVFEEMPVR 199
IR GF ++Y ++L+ +YSK V ID+ K+F+ MPVR
Sbjct: 103 IRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVR 162
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+VVSW +IA AQ + L + + M L P+ FT +SIL T + +G+ H
Sbjct: 163 DVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIH 222
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
IR GF + + +SLI MY KC VE +V F+ + +D +SWNS+IAG Q+G
Sbjct: 223 GYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFD 282
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
+ + F M+K++VKP ++F VI +C H + GK + + G S ++
Sbjct: 283 QGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLL 342
Query: 380 DLLGRAGLLEEAR 392
D+ + G ++ AR
Sbjct: 343 DMYAKCGNIKMAR 355
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
++W II +A + L + ++R+ + P+ F S+L A T +S H
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101
Query: 262 TIRMGFFSYIQVANSLISMYCKCG----------------------NVEEAVYVFNNMHG 299
IR+GF + AN+L++MY K ++ +F+ M
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+VSWN++IAG AQ+G+ A+++ +EM K+ ++PD+ T ++ V +GK
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
+HG ++ S ++D+ + +E
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVE 251
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 253/434 (58%), Gaps = 35/434 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHD------------LHRERLKVDASFLSTAVTSCGST 148
+ ++FD++ + VV +IS + + + RE ++ + S+ + +C
Sbjct: 109 AEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGL 168
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
N+R C I+TG ++V+V S+LI +YSK + +A VF+EMP R++V W +II
Sbjct: 169 PNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSII 225
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
FAQ + L L++ M+ + + T TS+L ACTG L GR H ++ F
Sbjct: 226 GGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FD 283
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
+ + N+LI MYCKCG++E+A F+ M KD++SW++M+AG AQ+G + +A++LFE M
Sbjct: 284 QDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESM 343
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGL 387
+ +P+ IT LGV+ +C H GLVE+G YF SM K G+ P +HY C++DLLGRAG
Sbjct: 344 KESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGR 403
Query: 388 LEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANL 430
L+EA I +M P++V W AA+ + LEPE A T++ L+N+
Sbjct: 404 LDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNI 463
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
YA + W+ A VRK M ++G++ PGCSWIE+ ++ F D S+ ++ EI+ L+ L
Sbjct: 464 YANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDL 523
Query: 491 VDQMKTLGYVPEVH 504
++++ +GYVP+ +
Sbjct: 524 IERVMGVGYVPDTN 537
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 152/295 (51%), Gaps = 11/295 (3%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+ + + + R + DA S + C + ++ G G+ ++V +
Sbjct: 35 DLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVN 94
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y K ++ +A +F+EMP RNVVSWT +I+A++ + D L+ +M + P
Sbjct: 95 TLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRP 153
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N FT++S+L AC G L R HC I+ G S + V ++LI +Y K +++ A+ VF
Sbjct: 154 NMFTYSSVLRACDG---LPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVF 210
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M +D+V WNS+I G+AQ+ A++LF+ M + D T V+ +C L+E
Sbjct: 211 DEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLE 270
Query: 355 EGKVYFDSMAKHGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G+ + H LK + D + ++D+ + G LE+A +M + + + W
Sbjct: 271 LGR----QVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRM-VEKDVISW 320
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 108/216 (50%), Gaps = 8/216 (3%)
Query: 197 PVRNVVSWTAII---AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
P+R V + ++ A F +W + + M + + T++ ++ C+ GA+
Sbjct: 13 PLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQ 72
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
+G+ H G+ + V N+L++MY K +EEA +F+ M +++VSW +MI+ Y+
Sbjct: 73 EGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS 132
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
L +A+ M ++ V+P+ T+ V+ +C GL +++ + K GL+ ++
Sbjct: 133 NK-LNDKALKCLILMFREGVRPNMFTYSSVLRAC--DGLPNLRQLHC-GIIKTGLESDVF 188
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S ++D+ + L+ A +MP + V+W +
Sbjct: 189 VRSALIDVYSKWSDLDNALGVFDEMPTR-DLVVWNS 223
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 227/383 (59%), Gaps = 17/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ + + GS + G ++ G+ ++VYVGS+L+ +Y++C + A F+ MP
Sbjct: 192 LSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP 251
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ VSW A+I+ A++ + + L L M+ +P FT++S+ SAC GAL QG+
Sbjct: 252 TKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKW 311
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ G + N+L+ MY K G++++A VF+ + D+VSWN+M+ G AQHGL
Sbjct: 312 VHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGL 371
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+D FE+M++ ++P+ I+FL V+++C H GL++EG YF+ M K+ ++P++ HY
Sbjct: 372 GKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVT 431
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPEC 420
VDLLGR GLL+ A FI++MPI P A +W AAE L+P
Sbjct: 432 FVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHD 491
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+ + L+N+YA W A+VRK+MK+ G+K P CSW+EI N V+ F A D+++ ++
Sbjct: 492 SGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQI 551
Query: 481 SEILPVLDFLVDQMKTLGYVPEV 503
EI + + ++K +GYVP+
Sbjct: 552 KEIRGKWEEISGKIKEIGYVPDT 574
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 150/283 (53%), Gaps = 2/283 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI-TLYSKCR 184
+ R L D + S + C + G + + F+ N V ++I +Y+KC
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA ++F+EMP +++V+WTA+IA F+Q + L L+ M L+PN FT +S+L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
A L G H ++ G+ S + V ++L+ MY +CG+++ A F+ M K VS
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN++I+G+A+ G A+ L +M ++ +P T+ V S+C G +E+GK M
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMI 317
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K GLK + ++D+ +AG +++A+ ++ + P+ V W
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSW 359
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 99/187 (52%), Gaps = 6/187 (3%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKC 284
+++ L P+ ++ +L CT G + QGR H + F +++ + N +++MY KC
Sbjct: 77 LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G +++A +F+ M KD+V+W ++IAG++Q+ A+ LF +M++ ++P+ T ++
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLL 196
Query: 345 --SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
S HG ++ G K+G + + S +VD+ R G ++ A+ MP
Sbjct: 197 KASGSEHG--LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPT-K 253
Query: 403 NAVIWEA 409
+ V W A
Sbjct: 254 SEVSWNA 260
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 242/433 (55%), Gaps = 56/433 (12%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG-FIANVYVGSSLITLYSKCRVIIDAYKV 192
D L++ V++C + I+ G ++ F ++ +G++L+ +Y+KC I +A +
Sbjct: 251 DEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARII 310
Query: 193 FEEMPVRNVVS-------------------------------WTAIIAAFAQEWQVDMCL 221
F+ MP+R+VVS W A+IA Q + + L
Sbjct: 311 FDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEAL 370
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF-FSY-----IQVAN 275
L+R+++ + P +TF ++L+AC L GR AH ++ GF F Y + V N
Sbjct: 371 ILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGN 430
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
SLI MY KCG+VE VF +M KD VSWN+MI GYAQ+G +A+++F +M++ P
Sbjct: 431 SLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAP 490
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
D +T +GV+ +C H GL++EG+ YF SM A+HGL P DHY+C+VDLLGRAG LEEA++
Sbjct: 491 DHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNL 550
Query: 395 IKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCW 437
I++M + P+A++W E +LL ++PE + +V L+N+YA R W
Sbjct: 551 IEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDW 610
Query: 438 DQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
RVRKLM+ +G+ PGCSWIEI + F +DK + R EI VL ++ QMK
Sbjct: 611 KNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQA 670
Query: 498 GYVPEVHEEKVDD 510
GYVP V + D+
Sbjct: 671 GYVPYVGSNEFDE 683
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 143/307 (46%), Gaps = 32/307 (10%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L + L +D+S S + C +R+ R + I++ F + ++ + LI +Y KC
Sbjct: 10 LKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGC 69
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEW-------------QVDMC------------ 220
+ A K+F+ M RN+ SW +II AF + QVD C
Sbjct: 70 VDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQH 129
Query: 221 ------LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
L + M N+++F S LSAC G L G H R + S + +
Sbjct: 130 GRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMG 189
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
++L+ MY KCG VE A VF+ M + VSWNS+I Y Q+G A+ +F EM+K V+
Sbjct: 190 SALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVE 249
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARD 393
PD +T V+S+C ++EG+ + K + +L + ++D+ + + EAR
Sbjct: 250 PDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARI 309
Query: 394 FIKQMPI 400
MPI
Sbjct: 310 IFDMMPI 316
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 6/165 (3%)
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
L + ++ +L + F+ +L+ C S + H I+ F S + N LI +Y
Sbjct: 6 LVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYG 65
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG V+ A +F+ M ++I SWNS+I + + G A+ +FE+M + D ++
Sbjct: 66 KCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKM----PQVDQCSWNS 121
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
+IS G +E VYF M HG ++ YS L AGL
Sbjct: 122 MISGFEQHGRFDEALVYFAQMHGHGFL--VNEYSFGSALSACAGL 164
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/382 (38%), Positives = 232/382 (60%), Gaps = 18/382 (4%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ + C + + G I++G+ ++V ++LIT+Y KC + +A K+F ++P
Sbjct: 302 TSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH 361
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+VV+WTA++ +AQ D ++L+R M+ ++P+ TFTS L++C+ L +G+S
Sbjct: 362 RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSI 421
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H Q + G+ + + ++L+SMY KCG++++A VFN M +++V+W +MI G AQHG
Sbjct: 422 HQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRC 481
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSC 377
A++ FE+M KQ +KPD +TF V+S+C H GLVEEG+ +F SM +G+KP ++HYSC
Sbjct: 482 REALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSC 541
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPEC 420
VDLLGRAG LEEA + I MP P +W AAE+ L L+P+
Sbjct: 542 FVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDD 601
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+V L+N+YA ++ A +VR++M+ + + PG SWIE+ V+ F EDKS+
Sbjct: 602 DGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEA 661
Query: 481 SEILPVLDFLVDQMKTLGYVPE 502
EI L L +Q+K GYVP+
Sbjct: 662 KEIYAELGKLTEQIKEQGYVPD 683
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 145/247 (58%), Gaps = 1/247 (0%)
Query: 163 RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
+ G VG+SL+ +Y+KC I A +F+++P +NVV+WT +IA +AQ+ QVD+ LE
Sbjct: 225 KAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALE 284
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
L M+ + + PN T+TSIL CT AL G+ H I+ G+ I V N+LI+MYC
Sbjct: 285 LLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYC 344
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG ++EA +F ++ +D+V+W +M+ GYAQ G AIDLF M +Q +KPD +TF
Sbjct: 345 KCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTS 404
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
++SC ++EGK + G ++ S +V + + G +++AR QM
Sbjct: 405 ALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS-ER 463
Query: 403 NAVIWEA 409
N V W A
Sbjct: 464 NVVAWTA 470
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 158/311 (50%), Gaps = 18/311 (5%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C R++ G +++G N Y+ ++L+++Y+KC + DA +VF+ + RN+VSW
Sbjct: 106 CARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSW 165
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
TA+I AF Q + Y M+ + +P+ TF S+L+A T L G+ H + +
Sbjct: 166 TAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAK 225
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G +V SL+ MY KCG++ +A +F+ + K++V+W +IAGYAQ G A++L
Sbjct: 226 AGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALEL 285
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
E+M + V P+ IT+ ++ C +E GK + + G E+ + ++ + +
Sbjct: 286 LEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCK 345
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVR 444
G L+EAR +P + + V W A + YA + D+A +
Sbjct: 346 CGGLKEARKLFGDLP-HRDVVTWTA-----------------MVTGYAQLGFHDEAIDLF 387
Query: 445 KLMKDKGLKTN 455
+ M+ +G+K +
Sbjct: 388 RRMQQQGIKPD 398
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 118/223 (52%), Gaps = 6/223 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ I + + ++ +K D ++A+TSC S ++ G + G+ +VY+ S+L
Sbjct: 381 DEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSAL 440
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+++Y+KC + DA VF +M RNVV+WTA+I AQ + LE + M+ ++P+
Sbjct: 441 VSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDK 500
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRM--GFFSYIQVANSLISMYCKCGNVEEAVYVF 294
TFTS+LSACT G + +GR H +++ + G ++ + + + + G++EEA V
Sbjct: 501 VTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVI 559
Query: 295 NNMHGKDIVS-WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
M + S W ++++ H R E ++K + PD
Sbjct: 560 LTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLK--LDPD 600
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F +L C +L QGR H ++ G + N+L+SMY KCG++ +A VF+ +
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
++IVSW +MI + + A +E M KPD +TF+ ++++ + L++ G+
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+AK GL+ E + +V + + G + +A+ ++P N V W
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLP-EKNVVTW 266
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 239/433 (55%), Gaps = 56/433 (12%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIR-TGFIANVYVGSSLITLYSKCRVIIDA 189
++ D L++ ++C S IR G ++ + ++ +G++L+ +Y+KCR + +A
Sbjct: 248 IEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEA 307
Query: 190 YKVFEEMPVR-------------------------------NVVSWTAIIAAFAQEWQVD 218
VF+ MP+R NVVSW A+IA + Q + +
Sbjct: 308 RLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENE 367
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF------SYIQ 272
+ L+ +++ + P +TF ++L+AC L GR AH ++ GF+ S I
Sbjct: 368 EAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIF 427
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V NSLI MY KCG VE+ VF M +D VSWN+MI GYAQ+G A+++F EM+
Sbjct: 428 VGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSG 487
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEA 391
+PD +T +GV+S+C H GLVEEG+ YF SM +HGL P DHY+C+VDLLGRAG L+EA
Sbjct: 488 ERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEA 547
Query: 392 RDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGV 434
+ I+ MP+ P+AV+W + AE L ++P + +V L+N+YA +
Sbjct: 548 NNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAEL 607
Query: 435 RCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
W RVRK M+ G+ PGCSWI I + ++ F +DK + +I +L L +QM
Sbjct: 608 GRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQM 667
Query: 495 KTLGYVPEVHEEK 507
K +GYVPE +++
Sbjct: 668 KRVGYVPEADDDE 680
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 162/323 (50%), Gaps = 39/323 (12%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
D+H E ++ +A+++C ++ G L ++ + +VY+GS+L+ +YSKCR
Sbjct: 141 DMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCR 200
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
V+ A + F++M VRN+VSW ++I + Q LE++ M N +EP++ T S+ S
Sbjct: 201 VVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVAS 260
Query: 245 ACTGSGALGQGRSAHCQTIRMG-FFSYIQVANSLISMYCKCGNVEEAVYVFN-------- 295
AC A+ +G H + ++ + + + + N+L+ MY KC V EA VF+
Sbjct: 261 ACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVV 320
Query: 296 -----------------------NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
NM +++VSWN++IAGY Q+G A+ LF + ++
Sbjct: 321 SETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRES 380
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL------KPELDHYSCVVDLLGRAG 386
+ P TF ++++C + ++ G+ + KHG ++ + ++D+ + G
Sbjct: 381 IWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCG 440
Query: 387 LLEEARDFIKQMPIYPNAVIWEA 409
L+E+ R ++M + + V W A
Sbjct: 441 LVEDGRLVFERM-LERDNVSWNA 462
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 32/300 (10%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D+S + + +C ++++ I+T F + +++ + L+ +Y KC + DA KV
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NSMLEP----------- 234
F+ M RN SW A++ A + +D L L++ M N+M+
Sbjct: 77 FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136
Query: 235 -------------NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
N+++F S LSAC G L G H + + + + ++L+ MY
Sbjct: 137 RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMY 196
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KC V A F++M ++IVSWNS+I Y Q+G A +A+++F MM ++PD IT
Sbjct: 197 SKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLA 256
Query: 342 GVISSCRHGGLVEEG-KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
V S+C + EG +++ M + +L + +VD+ + + EAR +MP+
Sbjct: 257 SVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 248/433 (57%), Gaps = 33/433 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMHH---------DLHRERLKVDAS----FLSTAVTSCGSTRN 150
+FD++ VV +IS + +L E L+ D +T +TSC +
Sbjct: 147 MFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG 206
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
G +AI+ + ++++VGSSL+ +Y+K I DA+ VF +P R+VV+ TAII+
Sbjct: 207 FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISG 266
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+AQ + L+L+R ++ + N T+ S+L+A +G AL G+ H +R G +SY
Sbjct: 267 YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 326
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ + NSLI MY KCGNV A +F++M + +SWN+M+ GY++HG+A ++LF+ M +
Sbjct: 327 VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMRE 386
Query: 331 Q-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSM--AKHGLKPELDHYSCVVDLLGRAGL 387
+ +VKPD+IT+L V+S C HG L + G F +M K G++P++ HY CVVDLLGRAG
Sbjct: 387 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 446
Query: 388 LEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANL 430
+EEA DFIK+MP P A IW + + L LEPE A +V L+NL
Sbjct: 447 VEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNL 506
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
YA W+ +R LM++K + PG SW+E+ +V+ F A D ++ R E+ + L
Sbjct: 507 YASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKEL 566
Query: 491 VDQMKTLGYVPEV 503
+ K GYVP++
Sbjct: 567 SIKFKEDGYVPDL 579
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 145/260 (55%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
T + C S R IR G I+T ++ +VY+ + LI LY+KC + DA ++F+EMP +
Sbjct: 95 TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK 154
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NVVSWTA+I+A++Q L L+ M S EPN FTF +IL++C GS GR H
Sbjct: 155 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 214
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
I+ + S++ V +SL+ MY K G + +A VF+ + +D+V+ ++I+GYAQ GL
Sbjct: 215 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 274
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A+ LF ++ + + +++T+ V+++ + GK + + G + + ++
Sbjct: 275 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 334
Query: 380 DLLGRAGLLEEARDFIKQMP 399
D+ + G + AR MP
Sbjct: 335 DMYSKCGNVCYARRIFDSMP 354
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 83/161 (51%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ +IL+ C A+ +G+ H I+ + + + LI +Y KC + +A +F+ M
Sbjct: 93 YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
K++VSW +MI+ Y+Q G A A++LF EM++ +P+ TF +++SC E G+
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 212
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K + + S ++D+ ++G + +A +P
Sbjct: 213 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 229/393 (58%), Gaps = 17/393 (4%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R R K + ++ + + G++ + G L ++ + +VYVGS+L+ +Y++C +
Sbjct: 158 RGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMD 217
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A VF+++ +N VSW A+IA FA++ + L ++ M+ + E FT++S+ SA
Sbjct: 218 MAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIA 277
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G GAL QG+ H I+ G V N+++ MY K G++ +A VF+ + KD+V+WNS
Sbjct: 278 GIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNS 337
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M+ +AQ+GL A+ FEEM K V + ITFL ++++C HGGLV+EGK YFD M ++
Sbjct: 338 MLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYN 397
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
L+PE+DHY VVDLLGRAGLL +A FI +MP+ P A +W AA
Sbjct: 398 LEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAA 457
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
+ L+P+ V L N+YA WD AARVRK+MK G+K P CSW+EI N V+ F
Sbjct: 458 DHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMF 517
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
A D ++ R EI + + Q++ GYVP
Sbjct: 518 VANDDTHPRSEEIYKKWEEISIQIRKAGYVPNT 550
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 134/251 (53%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+T+C R++ + F +V++ +SLI LY KC + DA +VF+ MP R++
Sbjct: 71 ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
SWT++IA +AQ D L L M +PN FTF S+L A S + G G H
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
T++ + + V ++L+ MY +CG ++ A+ VF+ + K+ VSWN++IAG+A+ G
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ +F EM + + T+ V S+ G +E+GK M K G + + ++D+
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDM 310
Query: 382 LGRAGLLEEAR 392
++G + +AR
Sbjct: 311 YAKSGSMIDAR 321
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 19/231 (8%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ S+++AC +L R+ H F + + NSLI +YCKCG V +A VF+ M
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+D+ SW S+IAGYAQ+ + A+ L M++ R KP+ TF ++ + G+
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
K+ ++ S ++D+ R G ++ A Q+ N V W A
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIAGFARKG 245
Query: 410 -AESRLLLEPEC-----AATHVQLANLY---AGVRCWDQAARVRKLMKDKG 451
E+ LL+ E ATH ++++ AG+ +Q V M G
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSG 296
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 229/391 (58%), Gaps = 17/391 (4%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R R K + ++ + + G++ + G L ++ + +VYVGS+L+ +Y++C +
Sbjct: 158 RGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMD 217
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A VF+++ +N VSW A+IA FA++ + L ++ M+ + E FT++S+ SA
Sbjct: 218 MAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIA 277
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G GAL QG+ H I+ G V N+++ MY K G++ +A VF+ + KD+V+WNS
Sbjct: 278 GIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNS 337
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M+ +AQ+GL A+ FEEM K V + ITFL ++++C HGGLV+EGK YFD M ++
Sbjct: 338 MLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYN 397
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
L+PE+DHY VVDLLGRAGLL +A FI +MP+ P A +W AA
Sbjct: 398 LEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAA 457
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
+ L+P+ V L N+YA WD AARVRK+MK G+K P CSW+EI N V+ F
Sbjct: 458 DHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMF 517
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
A D ++ R EI + + Q++ GYVP
Sbjct: 518 VANDDTHPRSEEIYKKWEEISIQIRKAGYVP 548
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 134/251 (53%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+T+C R++ + F +V++ +SLI LY KC + DA +VF+ MP R++
Sbjct: 71 ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
SWT++IA +AQ D L L M +PN FTF S+L A S + G G H
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
T++ + + V ++L+ MY +CG ++ A+ VF+ + K+ VSWN++IAG+A+ G
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ +F EM + + T+ V S+ G +E+GK M K G + + ++D+
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDM 310
Query: 382 LGRAGLLEEAR 392
++G + +AR
Sbjct: 311 YAKSGSMIDAR 321
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 19/231 (8%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ S+++AC +L R+ H F + + NSLI +YCKCG V +A VF+ M
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+D+ SW S+IAGYAQ+ + A+ L M++ R KP+ TF ++ + G+
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
K+ ++ S ++D+ R G ++ A Q+ N V W A
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIAGFARKG 245
Query: 410 -AESRLLLEPEC-----AATHVQLANLY---AGVRCWDQAARVRKLMKDKG 451
E+ LL+ E ATH ++++ AG+ +Q V M G
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSG 296
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 151/388 (38%), Positives = 228/388 (58%), Gaps = 17/388 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
K + ++ + + G++ + G L ++ + +VYVGS+L+ +Y++C + A
Sbjct: 37 FKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAI 96
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VF+++ +N VSW A+IA FA++ + L ++ M+ + E FT++S+ SA G G
Sbjct: 97 AVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG 156
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL QG+ H I+ G V N+++ MY K G++ +A VF+++ KD+V+WNSM+
Sbjct: 157 ALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLT 216
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
+AQ+GL A+ FEEM K V + ITFL ++++C HGGLV+EGK YFD M +H L+P
Sbjct: 217 AFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEP 276
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
E+DHY VVDLLGRAGLL +A FI +MP+ P A +W AA+
Sbjct: 277 EIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHV 336
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
L+P+ V L N+YA WD AARVRK+MK G+K P CSW+EI N V+ F A
Sbjct: 337 FELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVAN 396
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVP 501
D ++ R EI + + Q++ GYVP
Sbjct: 397 DDTHPRSEEIYKKWEEISIQIRKAGYVP 424
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 105/197 (53%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
M R++ SWT++IA +AQ D L L M +PN FTF S+L A S + G G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
H T++ + + V ++L+ MY +CG ++ A+ VF+ + K+ VSWN++IAG+A+
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G + +F EM + + T+ V S+ G +E+GK M K G +
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 376 SCVVDLLGRAGLLEEAR 392
+ ++D+ ++G + +AR
Sbjct: 181 NTILDMYAKSGSMIDAR 197
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 247/445 (55%), Gaps = 31/445 (6%)
Query: 104 VFDQLLDTPVVDVEKLISMHH-------------DLHRERLKVDASFLSTAVTSCGSTRN 150
VFD +L+ +V +I ++ ++ E K +S+ +++CG +
Sbjct: 110 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCD 169
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
CL+++T N+YVG++L+ LY+KC +I DA +VFE M ++ V+W++++A
Sbjct: 170 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 229
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ Q + L LYR + LE N FT +S++ AC+ AL +G+ H + GF S
Sbjct: 230 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN 289
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ VA+S + MY KCG++ E+ +F+ + K++ WN++I+G+A+H + LFE+M +
Sbjct: 290 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 349
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLE 389
+ P+ +TF ++S C H GLVEEG+ +F M +GL P + HYSC+VD+LGRAGLL
Sbjct: 350 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 409
Query: 390 EARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYA 432
EA + IK +P P A IW AAE LEPE A HV L+N+YA
Sbjct: 410 EAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA 469
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
+ W++ A+ RKL++D +K G SWI+I + V+ F + + R+ EI LD LV
Sbjct: 470 ANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVI 529
Query: 493 QMKTLGYVPEVHEEKVDDASHKRTE 517
+ + GY P V E D K+ E
Sbjct: 530 KFRKFGYKPSVEHELHDVEIGKKEE 554
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 152 RGGAPYQCLA-----IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
R GA + A IR +V + + LI YSKC + A +VF+ M R++VSW
Sbjct: 65 RNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 124
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I + + L+++ MRN + ++FT +S+LSAC + + + HC +++
Sbjct: 125 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 184
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ V +L+ +Y KCG +++AV VF +M K V+W+SM+AGY Q+ A+ L+
Sbjct: 185 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 244
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+ ++ + T VI +C + + EGK + K G + S VD+ + G
Sbjct: 245 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 304
Query: 387 LLEEA 391
L E+
Sbjct: 305 SLRES 309
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
IL C +GA+ + ++ H + IR+ + + N LI+ Y KCG VE A VF+ M +
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+VSWN+MI Y ++ + A+D+F EM + K T V+S+C E K
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
K + L + ++DL + G++++A + M
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 215
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 243/440 (55%), Gaps = 35/440 (7%)
Query: 100 GSSNVFDQLLD-TPVVDVEK---------LISMHHD-------LHRERLKVDASFLSTAV 142
G+ N +L + P+ DV L S HH+ + +K ++ + + +
Sbjct: 270 GNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVL 329
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+C + G AIR+GF +N VG++L+ +Y+KC + AYK+FE MP +NVV
Sbjct: 330 PACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVV 389
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
+W AII+ ++Q L L+ M+ ++P+ F S+L AC AL QG+ H T
Sbjct: 390 AWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYT 449
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
IR GF S + V L+ +Y KCGNV A +F M +D+VSW +MI Y HG A+
Sbjct: 450 IRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDAL 509
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDL 381
LF +M + K D I F ++++C H GLV++G YF M + +GL P+L+HY+C+VDL
Sbjct: 510 ALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDL 569
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATH 424
LGRAG L+EA IK M + P+A +W +AA+ L+P+ A +
Sbjct: 570 LGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYY 629
Query: 425 VQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEIL 484
V L+N+YA + W+ A++RK+MK+KG+K PGCS + + V F D+++ + +I
Sbjct: 630 VLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIY 689
Query: 485 PVLDFLVDQMKTLGYVPEVH 504
+L+ L +QM+ GYVP +
Sbjct: 690 AMLEILYEQMRKAGYVPNTN 709
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 167/321 (52%), Gaps = 13/321 (4%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFL 138
+T S + VFD++ VV +I+ + ++ +K ++S L
Sbjct: 165 YTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTL 224
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ + C + G C AIR+G ++V V + L+ +Y+KC + A+K+FE MP+
Sbjct: 225 VSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPI 284
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+V SW AII ++ Q L + M+ ++PN T S+L AC AL QG+
Sbjct: 285 RDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQI 344
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H IR GF S V N+L++MY KCGNV A +F M K++V+WN++I+GY+QHG
Sbjct: 345 HGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHP 404
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A+ LF EM Q +KPD+ + V+ +C H +E+GK + G + + + +
Sbjct: 405 HEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGL 464
Query: 379 VDLLGRAGLLEEARDFIKQMP 399
VD+ + G + A+ ++MP
Sbjct: 465 VDIYAKCGNVNTAQKLFERMP 485
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 158/292 (54%), Gaps = 1/292 (0%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + +++ + R + D + + +CGS +++ G I GF ++V VG++L
Sbjct: 103 KALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALA 162
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
++Y+KC + +A +VF+ MP R+VVSW AIIA ++Q Q L L+ M+ + ++PN
Sbjct: 163 SMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSS 222
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T S++ C AL QG+ HC IR G S + V N L++MY KCGNV A +F M
Sbjct: 223 TLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERM 282
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D+ SWN++I GY+ + A+ F M + +KP++IT + V+ +C H +E+G+
Sbjct: 283 PIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQ 342
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + + +V++ + G + A ++MP N V W A
Sbjct: 343 QIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNA 393
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 1/209 (0%)
Query: 193 FEEMPVRN-VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
F + +RN V W I + + + L LY M+ + + P+ F S++ AC
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L GR H I GF S + V +L SMY KCG++E A VF+ M +D+VSWN++IAG
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Y+Q+G A+ LF EM +KP++ T + V+ C H +E+GK + G++ +
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESD 255
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ + +V++ + G + A ++MPI
Sbjct: 256 VLVVNGLVNMYAKCGNVNTAHKLFERMPI 284
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 231/407 (56%), Gaps = 19/407 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D I M + L + DA + V +C ++ G L ++ GF ++ +V +
Sbjct: 511 DPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKN 570
Query: 175 SLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+LI +Y+KC + A +F + ++ V+W IIAA+ Q + + MR
Sbjct: 571 ALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFH 630
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN TF S+L A A +G + H I+MGF S V NSLI MY KCG ++ + +
Sbjct: 631 PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKL 690
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
FN M KD VSWN+M++GYA HG RAI LF M + +V+ D+++F+ V+S+CRH GLV
Sbjct: 691 FNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLV 750
Query: 354 EEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----- 407
EEG+ F SM+ K+ +KP+L+HY+C+VDLLGRAGL +E FIK MP+ P+A +W
Sbjct: 751 EEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLG 810
Query: 408 -----------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
E A L+ LEP A V L+++YA W A + R M D GLK
Sbjct: 811 SCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKT 870
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PGCSW+E+ N V+ FR DKS+ +L + + + L+++M+ +GYVP+
Sbjct: 871 PGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPD 917
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 138/268 (51%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
+A + T ++ G A++ +++ V + L+ +Y+KC A ++F + R
Sbjct: 334 SAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR 393
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
++V+W+AIIAA Q + L L++ M+N ++PN T SIL AC L G+S H
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIH 453
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
C T++ S + +L+SMY KCG A+ FN M +DIV+WNS+I GYAQ G
Sbjct: 454 CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPY 513
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
AID+F ++ + PDA T +GV+ +C +++G + K G + + + ++
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALI 573
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIW 407
D+ + G L A + + V W
Sbjct: 574 DMYAKCGSLPSAEFLFNKTDFTKDEVTW 601
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 2/238 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M++ + + L+ D + + +C N++ G + R G +V++G+ L+ +
Sbjct: 114 LEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDM 173
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSK + A +VF++MP R+VV+W A+IA +Q ++ +R M+ +EP+ +
Sbjct: 174 YSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSL 233
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
++ + RS H R F S V+N LI +Y KCG+V+ A VF+ M
Sbjct: 234 LNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVD 291
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D VSW +M+AGYA +G V ++LF++M V+ + ++ + + +E+GK
Sbjct: 292 QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGK 349
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 115/227 (50%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
V + LI LYSKC + A +VF++M ++ VSW ++A +A LEL+ M+
Sbjct: 265 VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN 324
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ N + S A + L +G+ H ++ S I VA L+ MY KCG E+A
Sbjct: 325 VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAK 384
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F + G+D+V+W+++IA Q G A+ LF+EM Q++KP+ +T + ++ +C
Sbjct: 385 QLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLS 444
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L++ GK K + +L + +V + + G A +M
Sbjct: 445 LLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 27/235 (11%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L +L+ KC + A VF+ P + + W ++I A+ + Q + LE+Y M LEP
Sbjct: 71 NLYSLFHKCDL---ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEP 127
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ +TFT +L ACTG+ L +G H + R G + + L+ MY K G+++ A VF
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV---------IS 345
+ M +D+V+WN+MIAG +Q A+D F M V+P +++ L + I
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE 247
Query: 346 SCR--HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
CR HG + F S +GL +DL + G ++ AR QM
Sbjct: 248 LCRSIHGYVFRRD---FSSAVSNGL----------IDLYSKCGDVDVARRVFDQM 289
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N + +LS+C L Q H Q I GF + + + LI++Y + A VF
Sbjct: 31 NYLHYPRLLSSCKHLNPLLQ---IHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVF 86
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
++ + WNSMI Y + A++++ M+++ ++PD TF V+ +C ++
Sbjct: 87 DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
EG + + + GL+ ++ + +VD+ + G L+ AR+ +MP + V W A + L
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP-KRDVVAWNAMIAGL 205
Query: 415 -LLEPECAA--------------THVQLANLYAGV 434
E C A + V L NL+ G+
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGI 240
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/431 (38%), Positives = 245/431 (56%), Gaps = 36/431 (8%)
Query: 99 FGSSNVFDQLLDTPVVDVEKLI-----------SMHHDLHRERLKVDASFLSTAVTSCGS 147
FGS VFD D VV +I +M + + +R V A+ + T V+ +
Sbjct: 156 FGS-RVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEM-TVVSVLKA 213
Query: 148 TR---NIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
TR ++R G + G + +V++GSSL+ +Y KC DA KVF+EMP RNVV+
Sbjct: 214 TRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVT 273
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA+IA + Q + + ++ M S + PN+ T +S+LSAC GAL +GR HC I
Sbjct: 274 WTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVI 333
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ V +LI Y KCG +EEA+ VF + K++ +W +MI G+A HG A+ A+D
Sbjct: 334 KNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVD 393
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLL 382
LF M+ V P+ +TF+ V+S+C HGGLVEEG+ F SM + L+P+ DHY+C+VDL
Sbjct: 394 LFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLF 453
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEA----------------AESRLL-LEPECAATHV 425
GR GLLEEA+ I++MP+ P +W A A SR++ L+P + +
Sbjct: 454 GRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYT 513
Query: 426 QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA-EDKSNTRLSEIL 484
LANLY+ + WD ARVRK MKD+ + +PGCSWIE+ ++ F A +DK ++
Sbjct: 514 LLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVKGKLHEFIAFDDKKPLESDDLY 573
Query: 485 PVLDFLVDQMK 495
LD + QM+
Sbjct: 574 KTLDNVGVQMR 584
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 130/244 (53%), Gaps = 3/244 (1%)
Query: 151 IRGGAPYQCLA--IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+R P+Q A ++ GF ++++V +SLI+ YS C + +VF+ ++VVSWTA+I
Sbjct: 117 LRDANPFQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMI 176
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
F + + + M+ S + N+ T S+L A + + GRS H + G
Sbjct: 177 DGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRV 236
Query: 269 SY-IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ + +SL+ MY KCG ++A VF+ M +++V+W ++IAGY Q + + +FEE
Sbjct: 237 RCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEE 296
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M+K V P+ T V+S+C H G + G+ + K+ ++ + ++D + G
Sbjct: 297 MLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGC 356
Query: 388 LEEA 391
LEEA
Sbjct: 357 LEEA 360
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 27/220 (12%)
Query: 204 WTAIIAAFAQEWQVDMCLEL--YRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA--- 258
W +++ F+ ++ L YR MR + + P+ TF +L A + + R A
Sbjct: 70 WDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKA------VFKLRDANPF 123
Query: 259 --HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H ++ GF S + V NSLIS Y CG E VF+ KD+VSW +MI G+ ++
Sbjct: 124 QFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRND 183
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
++ A+ F EM + V + +T + V+ + R V G+ + HG E
Sbjct: 184 SSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGR------SIHGFYLEAGRVR 237
Query: 377 C-------VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
C +VD+ G+ G ++A+ +MP N V W A
Sbjct: 238 CDVFIGSSLVDMYGKCGCYDDAQKVFDEMP-SRNVVTWTA 276
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 255/462 (55%), Gaps = 40/462 (8%)
Query: 82 HLDSQKFNHDFTGTNSTF----------GSSNVFDQLLDTPVVDVEKLISMHHDLHRE-- 129
H+ + F HD NS G+ +FD++ +V +I+ + R
Sbjct: 99 HVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASD 158
Query: 130 ------RLKVDAS-----FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
R+ D + LS+ V CG + G + G +NV+VGSSL+
Sbjct: 159 ALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVD 218
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y++C + +A VF+++ +N VSW A+IA +A++ + + L L+ M+ P +FT
Sbjct: 219 MYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFT 278
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
++++LS+C+ G L QG+ H ++ V N+L+ MY K G++ +A VF+ +
Sbjct: 279 YSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLV 338
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
D+VS NSM+ GYAQHGL A F+EM++ ++P+ ITFL V+++C H L++EGK
Sbjct: 339 KVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKH 398
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
YF M K+ ++P++ HY+ +VDLLGRAGLL++A+ FI++MPI P IW
Sbjct: 399 YFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHK 458
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AA+ L+P TH LAN+YA W+ A+VRK+MKD G+K P CSW+
Sbjct: 459 NTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWV 518
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
E+ N V+ F A D ++ + +I + + L ++K +GYVP+
Sbjct: 519 EVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDT 560
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 128/227 (56%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ D + +T + C ++ G + + F ++ + +SL+ +Y++C + A
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
++F+EMP R++VSWT++I +AQ + L L+ M + EPN+FT +S++ C
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ GR H + G S + V +SL+ MY +CG + EA+ VF+ + K+ VSWN++IA
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
GYA+ G A+ LF M ++ +P T+ ++SSC G +E+GK
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGK 296
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
LEP+ + ++L CT G L +G+ H + F + + NSL+ MY +CG++E A
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F+ M +D+VSW SMI GYAQ+ A A+ LF M+ +P+ T ++ C +
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ K+G + S +VD+ R G L EA ++ N V W A
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGC-KNEVSWNA 246
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 224/388 (57%), Gaps = 24/388 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ ++ C + I G L + G A++ V +S++T+Y+KC + + +F EM
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT 380
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R++VSW+ IIA ++Q V EL MR +P +F S+LSAC L G+
Sbjct: 381 RRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + +G V ++LI+MYCKCG++EEA +F+ DIVSW +MI GYA+HG
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYS 376
+ IDLFE++ + ++PD++TF+GV+S+C H GLV+ G YF++M+ K+ + P +HY
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYG 560
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C++DLL RAG L +A I+ MP + + V+W AE L LEP
Sbjct: 561 CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPN 620
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
CA TH+ LAN+YA W +AA +RKLMK KG+ PG SWI++ ++V+ F A D+S+ +
Sbjct: 621 CAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQ 680
Query: 480 LSEILPVLDF------LVDQMKTLGYVP 501
+I +LD L D ++ G++P
Sbjct: 681 GEDIYNMLDLLASRTELADCVQETGFLP 708
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 138/268 (51%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L++D LS A +CG ++ G A++TG + +V+VGS+L+ +Y+K I +
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF EMP+RNVVSWTAII + L + M S +E + +TF L AC SG
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL GR H Q ++ GF VAN+L +MY KCG +E + +F M +D+VSW ++I
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
Q G A+ F M + V P+ TF VIS C + +E G+ + GL
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 351
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L + ++ + + G L + +M
Sbjct: 352 SLSVENSIMTMYAKCGQLTSSSVIFHEM 379
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 144/267 (53%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R R++ D+ + A+ +C + + G A++ GF + +V ++L T+Y+KC
Sbjct: 207 EMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCG 266
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ +FE+M +R+VVSWT II Q Q + ++ + MR S + PN++TF +++S
Sbjct: 267 KLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVIS 326
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
C + G H + +G + + V NS+++MY KCG + + +F+ M +DIVS
Sbjct: 327 GCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVS 386
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W+++IAGY+Q G A +L M + KP V+S+C + ++E GK +
Sbjct: 387 WSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVL 446
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEA 391
GL+ S ++++ + G +EEA
Sbjct: 447 SIGLEHTAMVLSALINMYCKCGSIEEA 473
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 110/237 (46%), Gaps = 4/237 (1%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSAC 246
+A ++F++M ++ +SWT +I+ + L L++ MR S L + F + AC
Sbjct: 67 NARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKAC 126
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ + G H ++ G + + V ++L+ MY K G + E VF+ M +++VSW
Sbjct: 127 GLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWT 186
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++I G + G A+ F EM + RV+ D+ TF + +C G + G+ K
Sbjct: 187 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 246
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL--LLEPECA 421
G + + + + G LE ++M + + V W + L + + ECA
Sbjct: 247 GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM-RDVVSWTTIITTLVQMGQEECA 302
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQR 332
+N + K G++ A +F+ M KD +SW ++I+GY + A+ LF+ M ++
Sbjct: 52 SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
++ D +C V G++ K GL + S ++D+ + G + E R
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171
Query: 393 DFIKQMPIYPNAVIWEA 409
+MP+ N V W A
Sbjct: 172 RVFHEMPM-RNVVSWTA 187
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 249/436 (57%), Gaps = 33/436 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHH---------DLHRERLKVDAS----FLSTAVTSCGS 147
+ +FD++ VV +IS + +L E L+ D +T +TSC
Sbjct: 116 ARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYG 175
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+ G +AI+ + ++++VGSSL+ +Y+K I DA+ VF +P R+VV+ TAI
Sbjct: 176 SLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAI 235
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ +AQ + L+L+R ++ + N T+ S+L+A +G AL G+ H +R G
Sbjct: 236 ISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQ 295
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+SY+ + NSLI MY KCGNV A +F++M + +SWN+M+ GY++HG+A ++LF+
Sbjct: 296 YSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKL 355
Query: 328 MMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSM--AKHGLKPELDHYSCVVDLLGR 384
M ++ +VKPD+IT+L V+S C HG L + G F +M K G++P++ HY CVVDLLGR
Sbjct: 356 MREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGR 415
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQL 427
AG +EEA DFIK+MP P A IW + + L LEPE A +V L
Sbjct: 416 AGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVIL 475
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+NLYA W+ +R LM++K + PG SW+E+ +V+ F A D ++ R E+ +
Sbjct: 476 SNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKV 535
Query: 488 DFLVDQMKTLGYVPEV 503
L + K GYVP++
Sbjct: 536 KELSIKFKEDGYVPDL 551
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 144/260 (55%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
+ + C S R IR G I+T ++ +VY+ + LI LY+KC + DA +F+EMP R
Sbjct: 67 SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR 126
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NVVSWTA+I+A++Q L L+ M S EPN FTF +IL++C GS GR H
Sbjct: 127 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 186
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
I+ + S++ V +SL+ MY K G + +A VF+ + +D+V+ ++I+GYAQ GL
Sbjct: 187 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 246
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A+ LF ++ + + +++T+ V+++ + GK + + G + + ++
Sbjct: 247 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 306
Query: 380 DLLGRAGLLEEARDFIKQMP 399
D+ + G + AR MP
Sbjct: 307 DMYSKCGNVCYARRIFDSMP 326
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 83/161 (51%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ SIL+ C A+ +G+ H I+ + + + LI +Y KC + +A +F+ M
Sbjct: 65 YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++VSW +MI+ Y+Q G A A++LF EM++ +P+ TF +++SC E G+
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 184
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K + + S ++D+ ++G + +A +P
Sbjct: 185 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 208/353 (58%), Gaps = 18/353 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV +SL+T+Y KC + A KVF EM RNVVSW +IA +AQ + EL M+
Sbjct: 451 NVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMK 510
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+P+ T SIL AC AL +G+ H + +++G S VA SLI MY KCG V
Sbjct: 511 VEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVT 570
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA VF+ + +D V+WN+M+AGY QHG+ A+DLF+ M+K+RV P+ ITF VIS+C
Sbjct: 571 EARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACG 630
Query: 349 HGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
GLV+EG+ F M + +KP HY C+VDLLGRAG L+EA +FI++MP P+ +W
Sbjct: 631 RAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVW 690
Query: 408 E-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AA L LEP A+ +V L+N+YA WD + +VRK+M DK
Sbjct: 691 HALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDK 750
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
GLK + G S IEI ++ F AED ++ + I L+ L +MK GY P++
Sbjct: 751 GLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDM 803
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 152/277 (54%), Gaps = 7/277 (2%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+FLS + +C + + + +G +V V ++LIT+YSKC I A ++F++
Sbjct: 181 TFLSI-LKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQK 239
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
M RNVVSWTAII A AQ +++ ELY M + + PN TF S+L++C AL +G
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRG 299
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H G + + VAN+LI+MYCKC +++A F+ M +D++SW++MIAGYAQ
Sbjct: 300 RRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQS 359
Query: 316 GLAVR-----AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G + L E M ++ V P+ +TF+ ++ +C G +E+G+ ++K G +
Sbjct: 360 GYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFES 419
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + + ++ + G + EA +M N V W
Sbjct: 420 DRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAW 455
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 37/304 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC + + G G +V V ++LIT+Y KC I DA + F+ M R+V
Sbjct: 287 LNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDV 346
Query: 202 VSWTAIIAAFAQ-----EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+SW+A+IA +AQ + +D +L MR + PN TF SIL AC+ GAL QGR
Sbjct: 347 ISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGR 406
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK---------------- 300
H + ++GF S + ++ +MY KCG++ EA VF+ M K
Sbjct: 407 QIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCG 466
Query: 301 ---------------DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++VSWN MIAGYAQ G + +L M + +PD +T + ++
Sbjct: 467 DLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILE 526
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
+C +E GK+ K GL+ + + ++ + + G + EAR ++ + V
Sbjct: 527 ACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKIS-NRDTV 585
Query: 406 IWEA 409
W A
Sbjct: 586 AWNA 589
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 144/279 (51%), Gaps = 1/279 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L V+++ + C R G G ++Y+G+SLI YSK +
Sbjct: 74 LLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVE 133
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF M +R+VV+W+++IAA+A + + M+++ +EPN TF SIL AC
Sbjct: 134 QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYS 193
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L + R H G + + VA +LI+MY KCG + A +F M +++VSW ++I
Sbjct: 194 MLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQ 253
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
AQH A +L+E+M++ + P+A+TF+ +++SC + G+ +++ GL+
Sbjct: 254 ANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLET 313
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + ++ + + +++AR+ +M + + W A
Sbjct: 314 DVVVANALITMYCKCNCIQDARETFDRMS-KRDVISWSA 351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 19/253 (7%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++L +++ L N T+ I+ C G+ H Q +G I + NSLI+
Sbjct: 63 IQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINF 122
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G+V VF M +D+V+W+SMIA YA + +A D FE M ++P+ ITF
Sbjct: 123 YSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITF 182
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
L ++ +C + ++E+ + + G++ ++ + ++ + + G + A + ++M
Sbjct: 183 LSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMK- 241
Query: 401 YPNAVIWEA-----AESRLLLEP-------------ECAATHVQLANLYAGVRCWDQAAR 442
N V W A A+ R L E A T V L N ++ R
Sbjct: 242 ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRR 301
Query: 443 VRKLMKDKGLKTN 455
+ + ++GL+T+
Sbjct: 302 IHSHISERGLETD 314
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 101/205 (49%), Gaps = 6/205 (2%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+ K+ + + E + D + + + +CG+ + G A++ G ++ V +
Sbjct: 498 DIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVAT 557
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SLI +YSKC + +A VF+++ R+ V+W A++A + Q ++L++ M + P
Sbjct: 558 SLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPP 617
Query: 235 NDFTFTSILSACTGSGALGQGRSAH---CQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
N+ TFT+++SAC +G + +GR + RM Q ++ + + G ++EA
Sbjct: 618 NEITFTAVISACGRAGLVQEGREIFRIMQEDFRMK--PGKQHYGCMVDLLGRAGRLQEAE 675
Query: 292 YVFNNMHGK-DIVSWNSMIAGYAQH 315
M + DI W++++ H
Sbjct: 676 EFIQRMPCEPDISVWHALLGACKSH 700
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/482 (35%), Positives = 264/482 (54%), Gaps = 35/482 (7%)
Query: 58 RTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVE 117
+ RDS + H +++ L +D +S + +G +S +FD D VV
Sbjct: 116 KLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDF--ASRLFDGAEDKDVVTWT 173
Query: 118 KLI-----------SMHHDLHRERLKVDASFLS--TAVTSCGSTRNIRGGAPYQCLAIRT 164
+I +M + + ++ V A+ ++ + + + G ++R G L + T
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 165 GFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLEL 223
G + +V++GSSL+ +Y KC DA KVF+EMP RNVV+WTA+IA + Q D + +
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 224 YRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
+ M S + PN+ T +S+LSAC GAL +GR HC I+ +LI +Y K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 284 CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
CG +EEA+ VF +H K++ +W +MI G+A HG A A DLF M+ V P+ +TF+ V
Sbjct: 354 CGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 344 ISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
+S+C HGGLVEEG+ F SM + ++ + DHY+C+VDL GR GLLEEA+ I++MP+ P
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEP 473
Query: 403 NAVIWEA----------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRK 445
V+W A A SR++ L+P + + LANLY+ + WD+ ARVRK
Sbjct: 474 TNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRK 533
Query: 446 LMKDKGLKTNPGCSWIEIMNVVYRFRA-EDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
MKD+ + +PG SWIE+ + F A +DK ++ LD + QM+ + +V
Sbjct: 534 QMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDELEDVT 593
Query: 505 EE 506
E
Sbjct: 594 AE 595
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 247/445 (55%), Gaps = 31/445 (6%)
Query: 104 VFDQLLDTPVVDVEKLISMHH-------------DLHRERLKVDASFLSTAVTSCGSTRN 150
VFD +L+ +V +I ++ ++ E K +S+ +++CG +
Sbjct: 118 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCD 177
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
CL+++T N+YVG++L+ LY+KC +I DA +VFE M ++ V+W++++A
Sbjct: 178 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ Q + L LYR + LE N FT +S++ AC+ AL +G+ H + GF S
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN 297
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ VA+S + MY KCG++ E+ +F+ + K++ WN++I+G+A+H + LFE+M +
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLE 389
+ P+ +TF ++S C H GLVEEG+ +F M +GL P + HYSC+VD+LGRAGLL
Sbjct: 358 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 417
Query: 390 EARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYA 432
EA + IK +P P A IW AAE LEPE A HV L+N+YA
Sbjct: 418 EAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA 477
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
+ W++ A+ RKL++D +K G SWI+I + V+ F + + R+ EI LD LV
Sbjct: 478 ANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVI 537
Query: 493 QMKTLGYVPEVHEEKVDDASHKRTE 517
+ + GY P V E D K+ E
Sbjct: 538 KFRKFGYKPSVEHELHDVEIGKKEE 562
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 152 RGGAPYQCLA-----IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
R GA + A IR +V + + LI YSKC + A +VF+ M R++VSW
Sbjct: 73 RNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 132
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I + + L+++ MRN + ++FT +S+LSAC + + + HC +++
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ V +L+ +Y KCG +++AV VF +M K V+W+SM+AGY Q+ A+ L+
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+ ++ + T VI +C + + EGK + K G + S VD+ + G
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 387 LLEEA 391
L E+
Sbjct: 313 SLRES 317
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
IL C +GA+ + ++ H + IR+ + + N LI+ Y KCG VE A VF+ M +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+VSWN+MI Y ++ + A+D+F EM + K T V+S+C E K
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K + L + ++DL + G++++A + M ++V W +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSS 233
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/407 (37%), Positives = 231/407 (56%), Gaps = 18/407 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + M ++ LK D+ LS+ + +I G +IR G A++YV SSL
Sbjct: 221 EETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSL 280
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC + D+ +VF + R+ +SW +IIA Q D L +R M + ++P
Sbjct: 281 IDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKS 340
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
++F+SI+ AC L G+ H R GF I +A+SL+ MY KCGN+ A +F+
Sbjct: 341 YSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDR 400
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D+VSW +MI G A HG A AI+LFE+M + +KP+ + F+ V+++C HGGLV+E
Sbjct: 401 MRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEA 460
Query: 357 KVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
YF+SM + G+ P ++HY+ V DLLGRAG LEEA DFI M I P IW
Sbjct: 461 WKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACR 520
Query: 408 --------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
E +R+L ++P ++ LAN+Y+ R W +AA+ R M+ G++ P C
Sbjct: 521 VHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPAC 580
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
SWIE+ N VY F A D+S+ +I ++ LV+ M+ GYVP+ E
Sbjct: 581 SWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSE 627
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 33/311 (10%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA- 189
L D + + + SC ++ G IR G ++Y G++L+ +YSK R + ++
Sbjct: 102 LYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESG 161
Query: 190 -------------------------------YKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
K+FE MP +++VSW IIA A+ +
Sbjct: 162 RQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYE 221
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L + R M + L+P+ FT +S+L + + +G+ H +IR G + I VA+SLI
Sbjct: 222 ETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLI 281
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY KC V ++ VF + +D +SWNS+IAG Q+GL + F +M+ ++KP +
Sbjct: 282 DMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSY 341
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+F ++ +C H + GK + ++G + S +VD+ + G + A+ +M
Sbjct: 342 SFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRM 401
Query: 399 PIYPNAVIWEA 409
+ + V W A
Sbjct: 402 RLR-DMVSWTA 411
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 32/238 (13%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+YS ++ D+ ++F + ++W ++I + L + M S L P+
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA-------- 290
F S+L +C L G S H IR+G + N+L++MY K +EE+
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 291 -VY-----------------------VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
V+ +F M KD+VSWN++IAG A++GL + +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
EM +KPD+ T V+ + GK + GL ++ S ++D+ +
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAK 286
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 223/388 (57%), Gaps = 24/388 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ ++ C + I G L + G A++ V +S++T+Y+KC + + +F EM
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT 380
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R++VSW+ IIA + Q V EL MR +P +F S+LSAC L G+
Sbjct: 381 RRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + +G V ++LI+MYCKCG++EEA +F+ DIVSW +MI GYA+HG
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYS 376
+ IDLFE++ + ++PD++TF+GV+S+C H GLV+ G YF++M+ K+ + P +HY
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYG 560
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C++DLL RAG L +A I+ MP + + V+W AE L LEP
Sbjct: 561 CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPN 620
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
CA TH+ LAN+YA W +AA +RKLMK KG+ PG SWI++ ++V+ F A D+S+ +
Sbjct: 621 CAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQ 680
Query: 480 LSEILPVLDF------LVDQMKTLGYVP 501
+I +LD L D ++ G++P
Sbjct: 681 GEDIYNMLDLLASRTELADCVQETGFLP 708
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 138/268 (51%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L++D LS A +CG ++ G A++TG + +V+VGS+L+ +Y+K I +
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF EMP+RNVVSWTAII + L + M S +E + +TF L AC SG
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL GR H Q ++ GF VAN+L +MY KCG +E + +F M +D+VSW ++I
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
Q G A+ F M + V P+ TF VIS C + +E G+ + GL
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 351
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L + ++ + + G L + +M
Sbjct: 352 SLSVENSIMTMYAKCGQLTSSSVIFHEM 379
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 143/267 (53%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R R++ D+ + A+ +C + + G A++ GF + +V ++L T+Y+KC
Sbjct: 207 EMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCG 266
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ +FE+M +R+VVSWT II Q Q + ++ + MR S + PN++TF +++S
Sbjct: 267 KLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVIS 326
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
C + G H + +G + + V NS+++MY KCG + + +F+ M +DIVS
Sbjct: 327 GCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVS 386
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W+++IAGY Q G A +L M + KP V+S+C + ++E GK +
Sbjct: 387 WSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVL 446
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEA 391
GL+ S ++++ + G +EEA
Sbjct: 447 SIGLEHTAMVLSALINMYCKCGSIEEA 473
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 110/237 (46%), Gaps = 4/237 (1%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSAC 246
+A ++F++M ++ +SWT +I+ + L L++ MR S L + F + AC
Sbjct: 67 NARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKAC 126
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ + G H ++ G + + V ++L+ MY K G + E VF+ M +++VSW
Sbjct: 127 GLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWT 186
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++I G + G A+ F EM + RV+ D+ TF + +C G + G+ K
Sbjct: 187 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 246
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL--LLEPECA 421
G + + + + G LE ++M + + V W + L + + ECA
Sbjct: 247 GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM-RDVVSWTTIITTLVQMGQEECA 302
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQR 332
+N + K G++ A +F+ M KD +SW ++I+GY + A+ LF+ M ++
Sbjct: 52 SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
++ D +C V G++ K GL + S ++D+ + G + E R
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171
Query: 393 DFIKQMPIYPNAVIWEA 409
+MP+ N V W A
Sbjct: 172 RVFHEMPM-RNVVSWTA 187
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 237/396 (59%), Gaps = 19/396 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLIT 178
+ + ++ E L+ D L ++SC ++R G IR + +V+VG++L+
Sbjct: 211 VGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVD 270
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y KC A KVF+EMPV+NVVSW ++I+ AQ+ Q L ++R M+ ++P+D T
Sbjct: 271 MYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVT 330
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
++L++C G L G+ H R + + N+L+ MY KCG++++A +VF M+
Sbjct: 331 LVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMN 390
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
KD+ S+ +MI G A HG +A+DLF EM K ++PD +TF+GV+++C H GLVEEG+
Sbjct: 391 RKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRK 450
Query: 359 YFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------- 407
YF+ M+ + L+P+L+HY C+VDLLGRAGL+ EA +FI+ MPI P+A +
Sbjct: 451 YFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIH 510
Query: 408 ---EAAESRL----LLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
E ES + +EP +V ++N+Y+ W A ++RK MK++ L+ PGCS
Sbjct: 511 GKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSS 570
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKT 496
IE+ V++ F+ DKS+ ++ EI +LD ++ +K
Sbjct: 571 IELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLKN 606
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 146/301 (48%), Gaps = 17/301 (5%)
Query: 121 SMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRT--GFIANVYVGSSLIT 178
++ HD + +L SFLST T ++I+G I+T A + + + L
Sbjct: 13 TLPHDFNPHKL----SFLSTLQT----CKSIKGLKQIHASIIKTMPSPDAQLTISTRLSA 64
Query: 179 LYSKCRVIIDAY--KVFEEMPVRNVVSWTAIIAAFAQEWQVDM-CLELYRMMRNSMLEPN 235
L ++ I Y + ++ N+ + AII A + L +Y+ M + + P+
Sbjct: 65 LCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPD 124
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++T +L AC S A+ +G H Q I+MG S + V+N+L+ MY C + A VF+
Sbjct: 125 NYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFD 184
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+D+VSW +MI GY + G A + LF EM + ++ D +T + V+SSC G +
Sbjct: 185 TSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRL 244
Query: 356 GKVYFDSMAKHGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESR 413
G+ + ++ LD + + +VD+ + G AR ++MP+ N V W + S
Sbjct: 245 GRKLHRYIIRNS-NVNLDVFVGNALVDMYLKCGDANFARKVFQEMPV-KNVVSWNSMISG 302
Query: 414 L 414
L
Sbjct: 303 L 303
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 251/475 (52%), Gaps = 45/475 (9%)
Query: 88 FNHDFTGTNSTFGSSN-----------VFDQLLDTPVVDVEKLI-------------SMH 123
F+H F GTN G VFD++L+ V LI SM
Sbjct: 417 FHHPF-GTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMV 475
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
++ R+ D LST + +I+ G AI+ GF +V+VGSSLI +Y+ C
Sbjct: 476 REMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANC 535
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ + KVF+ + V W +++A +AQ V+ L ++R M + + P TF+S++
Sbjct: 536 TQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLI 595
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
A L G+ H IR F I +++SLI MYCKCGNV+ A VFN + DIV
Sbjct: 596 PAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIV 655
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SW +MI GYA HG A LFE M VKP+ ITFL V+++C H GLV+ G YF+SM
Sbjct: 656 SWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSM 715
Query: 364 A-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------------- 407
+ ++G P L+H + + D LGRAG L+EA +FI +M I P + +W
Sbjct: 716 SNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVL 775
Query: 408 --EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
E A+ LEP+ +HV L+N+Y+ W++AA++RK M+ KG+K P CSWIE+ N
Sbjct: 776 AEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKN 835
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE--EKVDDASHKRTEP 518
++ F A DKS+ I+ L+ +QM GYVP + + + +++ + +P
Sbjct: 836 KLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREGQP 890
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 135/300 (45%), Gaps = 22/300 (7%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
R V AS L A+ SC A LAIR+G A+ + ++L+ L K
Sbjct: 362 RSSVPAS-LPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHP 420
Query: 190 Y--------------------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
+ KVF+EM R+ VSW +I A+ + L + R M
Sbjct: 421 FGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWR 480
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
P+ FT +++L + +G H I+ GF + + V +SLI MY C ++
Sbjct: 481 DGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDY 540
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
++ VF++ D V WNSM+AGYAQ+G A+ +F M++ V+P +TF +I + +
Sbjct: 541 SMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGN 600
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L+ GK + + + S ++D+ + G ++ AR + P+ V W A
Sbjct: 601 LSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQ-SPDIVSWTA 659
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF--TFTSILSACTGSGALGQGRSAHC 260
SW I A + Q + L+ MR S+ + + + L +C G G S H
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 390
Query: 261 QTIRMGFFSYIQVANSLISMYCKC---------------GNVEEAVY-----VFNNMHGK 300
IR G F+ AN+L+++ K G +E A Y VF+ M +
Sbjct: 391 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 450
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D VSWN++I G A+H A+ + EM + PD T V+ ++ G V
Sbjct: 451 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 510
Query: 361 DSMAKHGLKPELDHYSCVVDL 381
K+G ++ S ++D+
Sbjct: 511 GYAIKNGFDNDVFVGSSLIDM 531
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 230/407 (56%), Gaps = 19/407 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D I M + L + DA + V +C ++ G L ++ GF ++ +V +
Sbjct: 511 DPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKN 570
Query: 175 SLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+LI +Y+KC + A +F + ++ V+W IIAA+ Q + + MR
Sbjct: 571 ALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFH 630
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN TF S+L A A +G + H I+MGF S V NSLI MY KCG + + +
Sbjct: 631 PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKL 690
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
FN M KD VSWN+M++GYA HG RAI LF M + +V+ D+++F+ V+S+CRH GLV
Sbjct: 691 FNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLV 750
Query: 354 EEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----- 407
EEG+ F SM+ K+ +KP+L+HY+C+VDLLGRAGL +E FIK MP+ P+A +W
Sbjct: 751 EEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLG 810
Query: 408 -----------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
E A L+ LEP A V L+++YA W A + R M D GLK
Sbjct: 811 SCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKT 870
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PGCSW+E+ N V+ FR DKS+ +L + + + L+++M+ +GYVP+
Sbjct: 871 PGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPD 917
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 138/268 (51%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
+A + T ++ G A++ +++ V + L+ +Y+KC A ++F + R
Sbjct: 334 SAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR 393
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
++V+W+AIIAA Q + L L++ M+N ++PN T SIL AC L G+S H
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIH 453
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
C T++ S + +L+SMY KCG A+ FN M +DIV+WNS+I GYAQ G
Sbjct: 454 CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPY 513
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
AID+F ++ + PDA T +GV+ +C +++G + K G + + + ++
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALI 573
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIW 407
D+ + G L A + + V W
Sbjct: 574 DMYAKCGSLPSAEFLFNKTDFTKDEVTW 601
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 2/238 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M++ + + L+ D + + +C N++ G + R G +V++G+ L+ +
Sbjct: 114 LEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDM 173
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSK + A +VF++MP R+VV+W A+IA +Q ++ +R M+ +EP+ +
Sbjct: 174 YSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSL 233
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
++ + RS H R F S V+N LI +Y KCG+V+ A VF+ M
Sbjct: 234 LNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVD 291
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D VSW +M+AGYA +G V ++LF++M V+ + ++ + + +E+GK
Sbjct: 292 QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGK 349
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 115/227 (50%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
V + LI LYSKC + A +VF++M ++ VSW ++A +A LEL+ M+
Sbjct: 265 VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN 324
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ N + S A + L +G+ H ++ S I VA L+ MY KCG E+A
Sbjct: 325 VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAK 384
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F + G+D+V+W+++IA Q G A+ LF+EM Q++KP+ +T + ++ +C
Sbjct: 385 QLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLS 444
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L++ GK K + +L + +V + + G A +M
Sbjct: 445 LLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 27/235 (11%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L +L+ KC + A VF+ P + + W ++I A+ + Q + LE+Y M LEP
Sbjct: 71 NLYSLFHKCDL---ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEP 127
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ +TFT +L ACTG+ L +G H + R G + + L+ MY K G+++ A VF
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV---------IS 345
+ M +D+V+WN+MIAG +Q A+D F M V+P +++ L + I
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE 247
Query: 346 SCR--HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
CR HG + F S +GL +DL + G ++ AR QM
Sbjct: 248 LCRSIHGYVFRRD---FSSAVSNGL----------IDLYSKCGDVDVARRVFDQM 289
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N + +LS+C L Q H Q I GF + + + LI++Y + A VF
Sbjct: 31 NYLHYPRLLSSCKHLNPLLQ---IHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVF 86
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
++ + WNSMI Y + A++++ M+++ ++PD TF V+ +C ++
Sbjct: 87 DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
EG + + + GL+ ++ + +VD+ + G L+ AR+ +MP + V W A + L
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP-KRDVVAWNAMIAGL 205
Query: 415 -LLEPECAA--------------THVQLANLYAGV 434
E C A + V L NL+ G+
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGI 240
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 254/446 (56%), Gaps = 32/446 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMH--HDLHRERLK-----------VDASFLSTAVTSCGSTRN 150
+ L + VV LIS + H+L E LK D S+A+++C +
Sbjct: 472 ILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQA 531
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G + +G+ ++ +G++L++LY++C I +AY FE++ ++ +SW +I+
Sbjct: 532 LNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISG 591
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
FAQ + L+++ M + LE + FTF S +SA + QG+ H I+ GF S
Sbjct: 592 FAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSD 651
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
I+V+N+LI+ Y KCG++E+A F M K+ VSWN+MI GY+QHG A++LFE+M +
Sbjct: 652 IEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQ 711
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
P+ +TF+GV+S+C H GLV +G YF+SM+K HGL P+ HY+CVVDL+ RAG L
Sbjct: 712 VGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLS 771
Query: 390 EARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYA 432
AR FI++MPI P+A IW AA+ L LEPE +AT+V L+N+YA
Sbjct: 772 RARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYA 831
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
WD + R++M+++G+K PG SWIE+ N V+ F D+ + +I L L
Sbjct: 832 VSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNK 891
Query: 493 QMKTLGYVPEVHEEKVDDASHKRTEP 518
+ +GY + + ++D ++ +P
Sbjct: 892 KAAEIGYFQDRY-SLLNDVEQEQKDP 916
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 143/266 (53%), Gaps = 1/266 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C S + G I+TGF NVYV S LI +Y+K + A+ + + +VVS
Sbjct: 424 TCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVS 483
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA+I+ +AQ L+ ++ M N ++ ++ F+S +SAC G AL QGR H Q+
Sbjct: 484 WTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSY 543
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + + N+L+S+Y +CG ++EA F + KD +SWN +I+G+AQ G A+
Sbjct: 544 VSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALK 603
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F +M + +++ TF +S+ + +++GK + K G +++ + ++
Sbjct: 604 VFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYA 663
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G +E+AR +MP N V W A
Sbjct: 664 KCGSIEDARREFCEMP-EKNDVSWNA 688
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ R+ LK D +++ +++C S + G I+ G +++ V +L+ LY C
Sbjct: 305 MKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSD 364
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I A+++F NVV W ++ AF + + ++R M+ L PN FT+ SIL
Sbjct: 365 IKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRT 424
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
CT GAL G H Q I+ GF + V + LI MY K G ++ A + + D+VSW
Sbjct: 425 CTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSW 484
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
++I+GYAQH L A+ F+EM+ + ++ D I F IS+C + +G+
Sbjct: 485 TALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYV 544
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEA 391
G +L + +V L R G ++EA
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRIKEA 570
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 1/274 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+ SF S G IR I G + + + + LI LY+K +II A KVF
Sbjct: 111 EISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVF 170
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ + ++ VSW A+I+ F+Q + + L+ M + + P + F+S+LS CT
Sbjct: 171 DNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFD 230
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G H + G V N+L+++Y + N A VF+ M KD VS+NS+I+G A
Sbjct: 231 VGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLA 290
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q G + A++LF +M + +KPD +T ++S+C G + +G+ + K G+ ++
Sbjct: 291 QQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMI 350
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++DL ++ A + N V+W
Sbjct: 351 VEGALLDLYVNCSDIKTAHEMFLTAQT-ENVVLW 383
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 185/403 (45%), Gaps = 29/403 (7%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I + ++H + S+ ++ C + G L + G YV ++L
Sbjct: 195 EEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNAL 254
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+TLYS+ + A KVF +M ++ VS+ ++I+ AQ+ D LEL+ M+ L+P+
Sbjct: 255 VTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDC 314
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T S+LSAC +GAL +G H I+ G S + V +L+ +Y C +++ A +F
Sbjct: 315 VTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLT 374
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+++V WN M+ + + + +F +M + + P+ T+ ++ +C G ++ G
Sbjct: 375 AQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLG 434
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ + K G + + S ++D+ + G L+ A ++ + + V W A
Sbjct: 435 EQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-EDDVVSWTA------- 486
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN--------PGCSWIEIMNVVY 468
L + YA + +A + K M ++G++++ C+ I+ +N
Sbjct: 487 ----------LISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGR 536
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE--EKVD 509
+ A+ + SE L + + LV G + E + EK+D
Sbjct: 537 QIHAQSYV-SGYSEDLSIGNALVSLYARCGRIKEAYLEFEKID 578
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ GF + + L+ +Y + KVFE+MP R+V SW II+ F ++ + L
Sbjct: 37 LKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVL 96
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSG-ALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+L+ M + P + +F S+L AC+G + H + I G ++N LI +
Sbjct: 97 DLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGL 156
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G + A VF+N+ KD VSW +MI+G++Q+G AI LF EM + P F
Sbjct: 157 YAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVF 216
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
V+S C L + G+ + K+G L+ Y C
Sbjct: 217 SSVLSGCTKIKLFDVGEQLHALVFKYG--SSLETYVC 251
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 65/110 (59%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T+ +L C SG+L + + H + +++GF + + N L+ +Y G+++ V VF +M
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ + SW+ +I+G+ + ++ R +DLF M+++ V P I+F V+ +C
Sbjct: 72 PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRAC 121
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 233/401 (58%), Gaps = 18/401 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ D+ + LK + ++ + +C S + G I G + +V ++L+ +
Sbjct: 532 LAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNM 591
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YS C + DA +VF+ M R++V++ A+I +A L+L+ ++ L+P+ T+
Sbjct: 592 YSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTY 651
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
++L+AC SG+L + H ++ G+ S + N+L+S Y KCG+ +A+ VF+ M
Sbjct: 652 INMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMK 711
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
++++SWN++I G AQHG + LFE M + +KPD +TF+ ++S+C H GL+EEG+ Y
Sbjct: 712 RNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRY 771
Query: 360 FDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F SM++ G+ P ++HY C+VDLLGRAG L+E IK MP N IW
Sbjct: 772 FCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHG 831
Query: 408 ------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AAES L L+P+ AA +V L+++YA WD AA++RKLM+ +G+ PG SWI
Sbjct: 832 NVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWI 891
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
E+ + ++ F AED+S+ +I LD L MK GYVP+
Sbjct: 892 EVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPD 932
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 136/237 (57%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ G +++ VG++L+ +Y+KC D +VFE++ R++++W +I A+ +
Sbjct: 372 LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEAS 431
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
E+Y M+ + PN T+ +L+AC AL GR H + ++ GF I V N+LISMY
Sbjct: 432 EIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMY 491
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+CG++++A +FN M KDI+SW +MI G A+ GL A+ +F++M + +KP+ +T+
Sbjct: 492 ARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYT 551
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++++C ++ G+ + + GL + + +V++ G +++AR +M
Sbjct: 552 SILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM 608
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 159/294 (54%), Gaps = 1/294 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E+ + + ++ + L + + ++SC S + G A++ + +V V +
Sbjct: 225 IEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANC 284
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++ +Y+KC I +A +VF++M ++VVSWT II +A ++ E+++ M+ + PN
Sbjct: 285 ILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPN 344
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T+ ++L+A +G AL G++ H + G S + V +L+ MY KCG+ ++ VF
Sbjct: 345 RITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFE 404
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ +D+++WN+MI G A+ G A +++ +M ++ + P+ IT++ ++++C + +
Sbjct: 405 KLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHW 464
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ + K G ++ + ++ + R G +++AR +M + + + W A
Sbjct: 465 GREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKM-VRKDIISWTA 517
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 158/332 (47%), Gaps = 20/332 (6%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L ++ +V++ + C +++ G I+ + + Y ++LI +Y +C
Sbjct: 132 LQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGS 191
Query: 186 IIDAYKVFEEM--PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
I +A +V+ ++ R V SW A++ + Q ++ L+L R M+ L T +L
Sbjct: 192 IEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLL 251
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
S+C AL GR H + ++ + VAN +++MY KCG++ EA VF+ M K +V
Sbjct: 252 SSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVV 311
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SW +I GYA G + A ++F++M ++ V P+ IT++ V+++ ++ GK +
Sbjct: 312 SWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHI 371
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAAT 423
G + +L + +V + + G ++ R ++ L+ + A
Sbjct: 372 LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEK-----------------LVNRDLIAW 414
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ + L G W++A+ + M+ +G+ N
Sbjct: 415 NTMIGGLAEGGN-WEEASEIYHQMQREGMMPN 445
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 18/276 (6%)
Query: 56 SPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVD 115
SP D + +H ++I+ L TD+ H+ + N ++ S + VFD++ +V
Sbjct: 559 SPAALDWGR-RIHQQVIEAGLATDA-HVANTLVNM-YSMCGSVKDARQVFDRMTQRDIVA 615
Query: 116 VEKLISMH--HDLHRERLKV-----------DASFLSTAVTSCGSTRNIRGGAPYQCLAI 162
+I + H+L +E LK+ D + +C ++ ++ L +
Sbjct: 616 YNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVL 675
Query: 163 RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
+ G++++ +G++L++ Y+KC DA VF++M RNV+SW AII AQ + L+
Sbjct: 676 KDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQ 735
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMY 281
L+ M+ ++P+ TF S+LSAC+ +G L +GR C R G I+ ++ +
Sbjct: 736 LFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLL 795
Query: 282 CKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHG 316
+ G ++E + M + W +++ HG
Sbjct: 796 GRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHG 831
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/472 (36%), Positives = 248/472 (52%), Gaps = 43/472 (9%)
Query: 88 FNHDFTGTNSTFGSSN-----------VFDQLLDTPVVDVEKLI-------------SMH 123
F+H F GTN G VFD++L+ V LI SM
Sbjct: 100 FHHPF-GTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMV 158
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
++ R+ D LST + +I+ G AI+ GF +V+VGSSLI +Y+ C
Sbjct: 159 REMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANC 218
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ + KVF+ + V W +++A +AQ V+ L ++R M + + P TF+S++
Sbjct: 219 TQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLI 278
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
A L G+ H IR F I +++SLI MYCKCGNV+ A VFN + DIV
Sbjct: 279 PAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIV 338
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SW +MI GYA HG A LFE M VKP+ ITFL V+++C H GLV+ G YF+SM
Sbjct: 339 SWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSM 398
Query: 364 A-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------------- 407
+ ++G P L+H + + D LGRAG L+EA +FI +M I P + +W
Sbjct: 399 SNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVL 458
Query: 408 --EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
E A+ LEP+ +HV L+N+Y+ W++AA++RK M+ KG+K P CSWIE+ N
Sbjct: 459 AEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKN 518
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
++ F A DKS+ I+ L+ +QM GYVP + + D ++ E
Sbjct: 519 KLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKRE 570
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 135/300 (45%), Gaps = 22/300 (7%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
R V AS L A+ SC A LAIR+G A+ + ++L+ L K
Sbjct: 45 RSSVPAS-LPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHP 103
Query: 190 Y--------------------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
+ KVF+EM R+ VSW +I A+ + L + R M
Sbjct: 104 FGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWR 163
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
P+ FT +++L + +G H I+ GF + + V +SLI MY C ++
Sbjct: 164 DGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDY 223
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
++ VF++ D V WNSM+AGYAQ+G A+ +F M++ V+P +TF +I + +
Sbjct: 224 SMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGN 283
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L+ GK + + + S ++D+ + G ++ AR + P+ V W A
Sbjct: 284 LSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQ-SPDIVSWTA 342
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF--TFTSILSACTGSGALGQGRSAHC 260
SW I A + Q + L+ MR S+ + + + L +C G G S H
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 261 QTIRMGFFSYIQVANSLISMYCKC---------------GNVEEAVY-----VFNNMHGK 300
IR G F+ AN+L+++ K G +E A Y VF+ M +
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D VSWN++I G A+H A+ + EM + PD T V+ ++ G V
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 361 DSMAKHGLKPELDHYSCVVDL 381
K+G ++ S ++D+
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDM 214
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 225/383 (58%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + + +C ++ G C I+ G + ++ +G++L+++Y+KC VI DA + F+EM
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMN 374
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ VS++AI++ Q + L ++RMM+ S ++P+ T +L AC+ AL G
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+H I GF + + N+LI MY KCG + A VFN M DIVSWN+MI GY HGL
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 494
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
+ A+ LF +++ +KPD ITF+ ++SSC H GLV EG+++FD+M++ + P ++H
Sbjct: 495 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL-----------------LEPE 419
C+VD+LGRAGL++EA FI+ MP P+ IW A S L PE
Sbjct: 555 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
V L+N+Y+ WD AA +R KD GLK PGCSWIEI +V+ F D+S+ +
Sbjct: 615 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQ 674
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
LS+I L+ L+ +MK LGY E
Sbjct: 675 LSQINRKLEELLVEMKRLGYQAE 697
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 150/285 (52%), Gaps = 2/285 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E + ++S + + + G + + G +R F V VG+ L+ +Y+KC+
Sbjct: 201 MQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQC 260
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILS 244
++ A K+F+ M VRN VSW+A+I + + LEL+ +M+ ++P T S+L
Sbjct: 261 LLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLR 320
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC L +GR HC I++G I + N+L+SMY KCG +++A+ F+ M+ KD VS
Sbjct: 321 ACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVS 380
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
++++++G Q+G A A+ +F M + PD T LGV+ +C H ++ G +
Sbjct: 381 FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI 440
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G + + ++D+ + G + AR+ +M + + V W A
Sbjct: 441 VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH-DIVSWNA 484
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
A+ V L LY C ++ A ++F+E+P +V+ W II A+A D ++LY M
Sbjct: 41 ADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSM 100
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ + PN +T+ +L AC+G A+ G H G S + V +L+ Y KCG +
Sbjct: 101 LHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGIL 160
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
EA +F++M +D+V+WN+MIAG + +GL A+ L +M ++ + P++ T +GV+ +
Sbjct: 161 VEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTV 220
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ GK + + + ++D+ + L AR M + N V W
Sbjct: 221 GEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR-NEVSW 279
Query: 408 EA 409
A
Sbjct: 280 SA 281
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 159/347 (45%), Gaps = 16/347 (4%)
Query: 66 EVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVV----------- 114
++H +++ DS L K + N + +FD++ + V+
Sbjct: 29 KIHQHFLKNTSNADSSVL--HKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAW 86
Query: 115 --DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
+ I ++H + ++ + + +C I G A G ++V+V
Sbjct: 87 NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
++L+ Y+KC ++++A ++F M R+VV+W A+IA + D ++L M+ +
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGI 206
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN T +L + ALG G++ H +R F + + V L+ MY KC + A
Sbjct: 207 CPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARK 266
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGG 351
+F+ M ++ VSW++MI GY A++LF++M +K + P +T V+ +C
Sbjct: 267 IFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLT 326
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ G+ + K G ++ + ++ + + G++++A F +M
Sbjct: 327 DLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEM 373
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+ +L AC S +L + + H ++ + V + L +Y C V A +F+ +
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
++ WN +I YA +G AIDL+ M+ V+P+ T+ V+ +C G L E
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS-GLLAIEDG 128
Query: 358 VYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
V S AK GL+ ++ + +VD + G+L EA+ M + + V W A
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNA 180
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + + +C ++ G I GF + + ++LI +YSKC I A +VF
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 471
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
M ++VSW A+I + L L+ + L+P+D TF +LS+C+ SG +
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVM 531
Query: 254 QGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAG 311
+GR R ++ ++ + + G ++EA + NM D+ W+++++
Sbjct: 532 EGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591
Query: 312 YAQHGLAVRAIDLFEEMMK--QRVKPDA 337
H + I+L EE+ K Q + P++
Sbjct: 592 CRIH----KNIELGEEVSKKIQSLGPES 615
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 222/383 (57%), Gaps = 17/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ + + + R G ++ GF +NV+VGS+L+ LY++ ++ DA VF+ +
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN VSW A+IA A+ + LEL++ M P+ F++ S+ AC+ +G L QG+
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ G N+L+ MY K G++ +A +F+ + +D+VSWNS++ YAQHG
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ FEEM + ++P+ I+FL V+++C H GL++EG Y++ M K G+ PE HY
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT 403
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPEC 420
VVDLLGRAG L A FI++MPI P A IW+ AAE L+P+
Sbjct: 404 VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDD 463
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
HV L N+YA W+ AARVRK MK+ G+K P CSW+EI N ++ F A D+ + +
Sbjct: 464 PGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQR 523
Query: 481 SEILPVLDFLVDQMKTLGYVPEV 503
EI + ++ ++K LGYVP+
Sbjct: 524 EEIARKWEEVLAKIKELGYVPDT 546
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 156/298 (52%), Gaps = 1/298 (0%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCL 160
S + D+ L P D+ L + +DL + D F +T + C + + G
Sbjct: 27 SEDSEDESLKFPSNDL-LLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAH 85
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
+++ F ++ +G++L+ +Y+KC + +A KVFE+MP R+ V+WT +I+ ++Q +
Sbjct: 86 ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDA 145
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L + M PN+FT +S++ A G H ++ GF S + V ++L+ +
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL 205
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y + G +++A VF+ + ++ VSWN++IAG+A+ +A++LF+ M++ +P ++
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ +C G +E+GK M K G K + ++D+ ++G + +AR ++
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 230/405 (56%), Gaps = 18/405 (4%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K I + + E + S S+ + C S+ + G + +G+ + VG++LI
Sbjct: 616 KAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALI 675
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
+ YSK + DA +VF++MP R++VSW IIA +AQ +E M+ + PN F
Sbjct: 676 SAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKF 735
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+F S+L+AC+ AL +G+ H + ++ ++V +LISMY KCG+ EA VF+N+
Sbjct: 736 SFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI 795
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
K++V+WN+MI YAQHGLA +A+ F M K+ +KPD TF ++S+C H GLV EG
Sbjct: 796 IEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGY 855
Query: 358 VYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-------- 408
F SM +++G+ P ++HY C+V LLGRA +EA I QMP P+A +WE
Sbjct: 856 QIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRI 915
Query: 409 ---------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
AA + L L A ++ L+N+YA WD A++R++M+ +G++ PG S
Sbjct: 916 HGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 975
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
WIE+ N+++ F A D+S+ +EI L L +M+ GY P+
Sbjct: 976 WIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQ 1020
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 155/263 (58%), Gaps = 1/263 (0%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
++LS + +C +++ + G G ++V +G++LI++Y++C + A ++F
Sbjct: 332 TYLSI-LNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYT 390
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP R+++SW AIIA +A+ + LY+ M++ ++P TF +LSAC S A G
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H +R G S +AN+L++MY +CG++ EA VF +D++SWNSMIAG+AQH
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G A LF+EM + ++PD ITF V+S C++ +E GK + + GL+ +++
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLG 570
Query: 376 SCVVDLLGRAGLLEEARDFIKQM 398
+ ++++ R G L++AR+ +
Sbjct: 571 NALINMYIRCGSLQDARNVFHSL 593
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 162/326 (49%), Gaps = 14/326 (4%)
Query: 97 STFGSSNVFDQLLDTPVVDVEKLISMH-------------HDLHRERLKVDASFLSTAVT 143
S + NVF+ V+ +I+ H ++ E L+ D ++ ++
Sbjct: 481 SLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
C + + G +G +V +G++LI +Y +C + DA VF + R+V+S
Sbjct: 541 GCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMS 600
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA+I A + + +EL+ M+N P TF+SIL CT S L +G+ +
Sbjct: 601 WTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYIL 660
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ V N+LIS Y K G++ +A VF+ M +DIVSWN +IAGYAQ+GL A++
Sbjct: 661 NSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVE 720
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+M +Q V P+ +F+ ++++C +EEGK + K L+ ++ + ++ +
Sbjct: 721 FAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYA 780
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G EA++ + I N V W A
Sbjct: 781 KCGSQGEAQEVFDNI-IEKNVVTWNA 805
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 133/228 (58%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
++++ + LI +Y KCR ++DA++VF+EMP R+V+SW ++I+ +AQ+ +L+ M+
Sbjct: 61 DIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N+ PN T+ SIL+AC L G+ H Q I+ G+ +V NSL+SMY KCG++
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A VF + +D+VS+N+M+ YAQ + LF +M + + PD +T++ ++ +
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+++EGK + GL ++ + +V + R G ++ A+ K
Sbjct: 241 TPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFK 288
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 136/238 (57%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+R+G +N ++ ++L+ +Y +C +++A VFE R+V+SW ++IA AQ +
Sbjct: 458 LRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAY 517
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L++ M+N LEP++ TF S+LS C AL G+ H + G + + N+LI+MY
Sbjct: 518 KLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMY 577
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+CG++++A VF+++ +D++SW +MI G A G ++AI+LF +M + +P TF
Sbjct: 578 IRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFS 637
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++ C ++EGK + G + + + ++ ++G + +AR+ +MP
Sbjct: 638 SILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 136/237 (57%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
L + G +++ VG++L+T+ +C + A + F+ R+VV + A+IAA AQ
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVE 313
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
E Y MR+ + N T+ SIL+AC+ S AL G+ H G S +Q+ N+LIS
Sbjct: 314 AFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALIS 373
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY +CG++ +A +F M +D++SWN++IAGYA+ A+ L+++M + VKP +T
Sbjct: 374 MYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVT 433
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
FL ++S+C + +GK+ + + + G+K + ++++ R G L EA++ +
Sbjct: 434 FLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFE 490
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 140/269 (52%), Gaps = 4/269 (1%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+T+C S + G I+ G+ + V +SL+++Y KC + A +VF + R+V
Sbjct: 135 LTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDV 194
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VS+ ++ +AQ+ V CL L+ M + + P+ T+ ++L A T L +G+ H
Sbjct: 195 VSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKL 254
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
T+ G S I+V +L++M +CG+V+ A F +D+V +N++IA AQHG V A
Sbjct: 255 TVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEA 314
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ + M V + T+L ++++C +E GK+ +++ G ++ + ++ +
Sbjct: 315 FEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISM 374
Query: 382 LGRAGLLEEARDFIKQMP----IYPNAVI 406
R G L +AR+ MP I NA+I
Sbjct: 375 YARCGDLPKARELFYTMPKRDLISWNAII 403
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 112/236 (47%), Gaps = 19/236 (8%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T+ ++L CT L + + H Q + I ++N LI+MY KC +V +A VF M
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D++SWNS+I+ YAQ G +A LFEEM P+ IT++ ++++C +E GK
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAAESR 413
+ K G + + + ++ + G+ G L AR + + N ++ A+
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 414 LLLE--------------PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ E P+ T++ L + + D+ R+ KL ++GL ++
Sbjct: 209 YVKECLGLFGQMSSEGISPD-KVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/457 (33%), Positives = 253/457 (55%), Gaps = 32/457 (7%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVV-------------DVEKLISMHHDLHRERLKVDASFL 138
+T S G+ VFD + VV ++E + + E ++ D
Sbjct: 304 YTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITY 363
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ +C + N+ GF ++ V ++L+ +Y+KC I DA +VF+ MP
Sbjct: 364 MHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPR 423
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+VVSW+A+I A+ + E + +M+ S +EP+ T+ ++L+AC GAL G
Sbjct: 424 RDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEI 483
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
+ Q I+ S++ + N+LI M K G+VE A Y+F+ M +D+++WN+MI GY+ HG A
Sbjct: 484 YTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNA 543
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSC 377
A+ LF+ M+K+R +P+++TF+GV+S+C G V+EG+ +F + + G+ P + Y C
Sbjct: 544 REALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGC 603
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPEC 420
+VDLLGRAG L+EA IK MP+ P + IW AAE L+++P
Sbjct: 604 MVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYD 663
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
A +VQL+++YA W+ A+VRK+M+ +G++ GC+WIE+ V+ F ED+S+ +
Sbjct: 664 GAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLV 723
Query: 481 SEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
EI L L++ +K GY+P + + + D ++ E
Sbjct: 724 GEIYAELARLMNAIKREGYIP-ITQNVLHDVGEQQKE 759
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 155/296 (52%), Gaps = 3/296 (1%)
Query: 115 DVEKLISMHHDLHRERLKVDA-SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
D EK + + + + LK + SFLS + C + + G + G + ++ V
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSI-LDGCWTPEALAWGKAVHAQCMNAGLVDDIRVA 297
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+SLI +Y+ C I A +VF+ M VR+VVSWT +I +A+ ++ L+ M+ ++
Sbjct: 298 TSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQ 357
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T+ I++AC S L R H Q GF + + V+ +L+ MY KCG +++A V
Sbjct: 358 PDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQV 417
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M +D+VSW++MI Y ++G A + F M + ++PD +T++ ++++C H G +
Sbjct: 418 FDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGAL 477
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + K L + + ++ + + G +E AR +I + + + W A
Sbjct: 478 DVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERAR-YIFDTMVRRDVITWNA 532
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 146/274 (53%), Gaps = 2/274 (0%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+FLS + +C S + G + GF+++ +G++L+++Y K + DA +VF+
Sbjct: 160 TFLSV-LDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDG 218
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ +R+V ++ ++ +A+ + EL+ M+ L+PN +F SIL C AL G
Sbjct: 219 LHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWG 278
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
++ H Q + G I+VA SLI MY CG++E A VF+NM +D+VSW MI GYA++
Sbjct: 279 KAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAEN 338
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G A LF M ++ ++PD IT++ ++++C + + + G +L
Sbjct: 339 GNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVS 398
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +V + + G +++AR MP + V W A
Sbjct: 399 TALVHMYAKCGAIKDARQVFDAMP-RRDVVSWSA 431
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 135/256 (52%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C R+ G + I+ G N+Y ++LI LYS C + +A ++F+ + + VV+W
Sbjct: 67 CTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTW 126
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
A+IA +AQ V L+R M + LEP+ TF S+L AC+ L G+ H Q +
Sbjct: 127 NALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVT 186
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
GF S ++ +L+SMY K G++++A VF+ +H +D+ ++N M+ GYA+ G +A +L
Sbjct: 187 AGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFEL 246
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F M + +KP+ I+FL ++ C + GK GL ++ + ++ +
Sbjct: 247 FYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTT 306
Query: 385 AGLLEEARDFIKQMPI 400
G +E AR M +
Sbjct: 307 CGSIEGARRVFDNMKV 322
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 19/228 (8%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T+ + CT G+ I+ G I N+LI +Y CGNV EA +F+++
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
K +V+WN++IAGYAQ G A LF +M+ + ++P ITFL V+ +C + GK
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLE 417
+ G + + +V + + G +++AR + I
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRD--------------- 223
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
+T + YA W++A + M+ GLK N S++ I++
Sbjct: 224 ---VSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNK-ISFLSILD 267
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 235/396 (59%), Gaps = 18/396 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E + +D + +T+CG+ G IRT + N++VGS+L+ +YSKCR
Sbjct: 272 MRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRS 331
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I A VF M +N++SWTA+I + Q + + ++ M+ ++PNDFT S++S+
Sbjct: 332 IRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISS 391
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C +L +G HC + G YI V+++L+++Y KCG++E+A +F+ M D VS+
Sbjct: 392 CANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSY 451
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
++++GYAQ G A IDLFE+M+ + VKP+ +TF+GV+S+C GLVE+G YF SM +
Sbjct: 452 TALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQ 511
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------------- 408
HG+ DHY+C++DL R+G L+EA +FI+QMP P+A+ W
Sbjct: 512 DHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGK 571
Query: 409 -AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
AAE+ L +P+ A++V L +++A W + A +R+ M+D+ +K PGCSWI+ N V
Sbjct: 572 WAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRV 631
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ F A+D+S+ I L +L +M GY P+V
Sbjct: 632 HIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDV 667
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 135/279 (48%), Gaps = 31/279 (11%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV----------- 202
G C +R GF A + S L+ +Y+K +I DA +VF+EM V+NVV
Sbjct: 168 GRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLR 227
Query: 203 --------------------SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
+WT ++ Q L+++R MR + + +TF SI
Sbjct: 228 CKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSI 287
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
L+AC A +G+ H TIR + I V ++L+ MY KC ++ A VF M K+I
Sbjct: 288 LTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNI 347
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
+SW +MI GY Q+G A+ +F EM +KP+ T VISSC + +EEG +
Sbjct: 348 ISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCM 407
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
GL+P + S +V L G+ G +E+A +MP +
Sbjct: 408 ALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH 446
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 133/325 (40%), Gaps = 56/325 (17%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM-------CL 221
N++ ++L++ + R++ D ++F MP R+ VS+ A+IA F+ L
Sbjct: 75 NLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALL 134
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
++ + + P+ T + ++ A + G GR HCQ +R+GF +Y + L+ MY
Sbjct: 135 REEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMY 194
Query: 282 CK-------------------------------CGNVEEAVYVFNNMHGKDIVSWNSMIA 310
K C VEEA VF M +D ++W +M+
Sbjct: 195 AKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVT 254
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G Q+GL A+D+F M + V D TF ++++C EEGK +
Sbjct: 255 GLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDG 314
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANL 430
+ S +VD+ + + A ++M N + W A +
Sbjct: 315 NIFVGSALVDMYSKCRSIRLAEAVFRRMTC-KNIISWTA-----------------MIVG 356
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTN 455
Y C ++A RV M+ G+K N
Sbjct: 357 YGQNGCGEEAVRVFSEMQTDGIKPN 381
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 248/413 (60%), Gaps = 21/413 (5%)
Query: 125 DLHRE-RLKVDASFLSTAVTSCG---STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
DL RE RL + + L V+ G S ++ L I+ G + + GS+LI +Y
Sbjct: 430 DLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVY 489
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
SKC + DA VFEE+ +++V WTA+ + + Q+ + + L+LY+ ++ S L+PN+FTF
Sbjct: 490 SKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFA 549
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
++++A + +L G+ H Q I+MGF VAN+L+ MY K G++EEA F + + K
Sbjct: 550 AVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWK 609
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D WNSMIA YAQHG A +A+ +FE+M+ + +KP+ +TF+GV+S+C H GL++ G +F
Sbjct: 610 DTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHF 669
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------------ 408
DSM++ G++P ++HY C+V LLGRAG L EA++FI++MPI AV+W
Sbjct: 670 DSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNV 729
Query: 409 -----AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
AAE + P + ++V L+N++A W R+R+ M G+ PGCSWIE+
Sbjct: 730 ELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEV 789
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
N +++F A+D ++ + I VLD L+ Q+K GY+ ++ +S ++
Sbjct: 790 NNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFGYMANTDNKQCYTSSQLKS 842
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 156/327 (47%), Gaps = 22/327 (6%)
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISM--HHDLHRERLKVDASF---------- 137
H ++ N ++ +FD + +V ++SM HH E L + F
Sbjct: 82 HAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNE 141
Query: 138 --LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
L++ V +C + L ++ G++ +VYV +SLI Y+K I DA +F+
Sbjct: 142 YILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDG 201
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ V+ +WT IIA ++++ + + L+L+ M+ + P+ + +S+LSAC L G
Sbjct: 202 LQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGG 261
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ HC +R G + + N I Y KC V+ +F+ M K++VSW ++IAG Q+
Sbjct: 262 KQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQN 321
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
A+DLF EM + PDA V++SC +E+G+ + + +K +D+
Sbjct: 322 SFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGR----QVHAYAIKVNIDND 377
Query: 376 SCV----VDLLGRAGLLEEARDFIKQM 398
V +D+ + L +AR M
Sbjct: 378 DFVKNGLIDMYAKCDSLTDARKVFNLM 404
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 13/301 (4%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFLSTAVTSCGSTRN 150
+FD+++D VV +I+ M + HR+ L + DA ++ + SCGS
Sbjct: 299 LFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVA 358
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G AI+ + +V + LI +Y+KC + DA KVF M ++VS+ A+I
Sbjct: 359 LEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEG 418
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
++++ ++ L+L+R MR S+ P F S+L L H I+ G
Sbjct: 419 YSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLD 478
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
++LI +Y KC V +A VF + KDIV W +M +GY Q ++ L++ +
Sbjct: 479 EFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQM 538
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
R+KP+ TF VI++ + + G+ + + + K G + + +VD+ ++G +EE
Sbjct: 539 SRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEE 598
Query: 391 A 391
A
Sbjct: 599 A 599
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 143/283 (50%), Gaps = 15/283 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D LS+ +++C + + GG C +R+G + +V + + I Y KC + K+F
Sbjct: 241 DKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLF 300
Query: 194 EEMPVRNVVSWTAIIAAFAQEW----QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
+ M +NVVSWT +IA Q +D+ +E+ RM N P+ F TS+L++C
Sbjct: 301 DRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWN----PDAFGCTSVLNSCGSL 356
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
AL +GR H I++ + V N LI MY KC ++ +A VFN M D+VS+N+MI
Sbjct: 357 VALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMI 416
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITF---LGVISSCRHGGLVEEGKVYFDSMAKH 366
GY++ A+DLF EM P + F LGV +S H +E + K+
Sbjct: 417 EGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYH---LELSNQIHGLIIKY 473
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ + S ++D+ + + +AR +++ + V+W A
Sbjct: 474 GVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQD-KDIVVWTA 515
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMM 227
++++ ++L+ YSK ++ A K+F+ M +N+V+W+++++ + L L+ + M
Sbjct: 73 DIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFM 132
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
R+ +PN++ S++ ACT G L H ++ G+ + V SLI Y K +
Sbjct: 133 RSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACI 192
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
++A +F+ + K +W ++IAGY++ G + ++ LF++M + V PD V+S+C
Sbjct: 193 DDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSAC 252
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+E GK + + G+ ++ + +D + ++ R +M + N V W
Sbjct: 253 LMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRM-VDKNVVSW 311
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 256 RSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
+ H + + GF + I + N+L+ Y K V A +F+ M K++V+W+SM++ Y
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117
Query: 315 HGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
H + A+ LF + M+ KP+ V+ +C G + + K G ++
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177
Query: 374 HYSCVVDLLGRAGLLEEAR 392
+ ++D + +++AR
Sbjct: 178 VCTSLIDFYTKHACIDDAR 196
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 222/383 (57%), Gaps = 17/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ + + + R G ++ GF +NV+VGS+L+ LY++ ++ DA VF+ +
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN VSW A+IA A+ + LEL++ M P+ F++ S+ AC+ +G L QG+
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ G N+L+ MY K G++ +A +F+ + +D+VSWNS++ YAQHG
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ FEEM + ++P+ I+FL V+++C H GL++EG Y++ M K G+ PE HY
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT 403
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPEC 420
VVDLLGRAG L A FI++MPI P A IW+ AAE L+P+
Sbjct: 404 VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDD 463
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
HV L N+YA W+ AARVRK MK+ G+K P CSW+EI N ++ F A D+ + +
Sbjct: 464 PGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQR 523
Query: 481 SEILPVLDFLVDQMKTLGYVPEV 503
EI + ++ ++K LGYVP+
Sbjct: 524 EEIARKWEEVLAKIKELGYVPDT 546
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 156/298 (52%), Gaps = 1/298 (0%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCL 160
S + D+ L P D+ L + +DL + D F +T + C + + G
Sbjct: 27 SEDSEDESLKFPSNDL-LLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAH 85
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
+++ F ++ +G++L+ +Y+KC + +A KVFE+MP R+ V+WT +I+ ++Q +
Sbjct: 86 ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDA 145
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L + M PN+FT +S++ A G H ++ GF S + V ++L+ +
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL 205
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y + G +++A VF+ + ++ VSWN++IAG+A+ +A++LF+ M++ +P ++
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ +C G +E+GK M K G K + ++D+ ++G + +AR ++
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 151/400 (37%), Positives = 233/400 (58%), Gaps = 19/400 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + +D L + + +CG+ + + G ++ GF ++++VG++L +YSK +
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 260
Query: 189 AYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A VF + RNVVS+T +I + + Q++ L ++ +R +EPN+FTF+S++ AC
Sbjct: 261 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
AL QG H Q +++ F V++ L+ MY KCG +E+A+ F+ + ++WNS
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNS 380
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-H 366
+++ + QHGL AI +FE M+ + VKP+AITF+ +++ C H GLVEEG YF SM K +
Sbjct: 381 LVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 440
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EA 409
G+ P +HYSCV+DLLGRAG L+EA++FI +MP PNA W A
Sbjct: 441 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLA 500
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
AE + LEP+ + V L+N+YA R W+ VR M+D +K PG SW+++ +
Sbjct: 501 AEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHV 560
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
F AED S+ R S I LD L+DQ+K GYVP +D
Sbjct: 561 FGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLD 600
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 179/365 (49%), Gaps = 30/365 (8%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+A+ +C S +I G CLA++ G + ++VGS+L +YSKC + DA KVFEEMP
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ VSWTA+I +++ + + L ++ M + + + S L AC A GRS
Sbjct: 169 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 228
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN-NMHGKDIVSWNSMIAGYAQHG 316
H +++GF S I V N+L MY K G++E A VF + +++VS+ +I GY +
Sbjct: 229 VHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETE 288
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+ + +F E+ +Q ++P+ TF +I +C + +E+G + K + S
Sbjct: 289 QIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSS 348
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRC 436
+VD+ G+ GLLE+A ++ P + W + L +++
Sbjct: 349 ILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNS-----------------LVSVFGQHGL 390
Query: 437 WDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKT 496
A ++ + M D+G+K N ++I ++ S+ L E LD+ KT
Sbjct: 391 GKDAIKIFERMVDRGVKPN-AITFISLLTGC--------SHAGLVE--EGLDYFYSMDKT 439
Query: 497 LGYVP 501
G VP
Sbjct: 440 YGVVP 444
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 133/260 (51%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + L+ + + T+ +R G L I G+ ++ + L+ +YSKC + A K+F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ MP RN+VSWTA+I+ +Q + + + MR P F F+S + AC G++
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ HC ++ G S + V ++L MY KCG + +A VF M KD VSW +MI GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ G A+ F++M+ + V D + +C + G+ S+ K G + ++
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243
Query: 374 HYSCVVDLLGRAGLLEEARD 393
+ + D+ +AG +E A +
Sbjct: 244 VGNALTDMYSKAGDMESASN 263
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L +G+ H I G+ + N L++MY KCG ++ A+ +F+ M +++VSW +MI+G
Sbjct: 21 LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+Q+ AI F M P F I +C G +E GK K G+ E
Sbjct: 81 LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L S + D+ + G + +A ++MP + V W A
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPC-KDEVSWTA 177
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 249/423 (58%), Gaps = 23/423 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ +++ + R R++ D + + +C S + + G I++G + +VG +L
Sbjct: 461 EETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGAL 520
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPN 235
I +Y KC +I +A K+ + + + +VSW AIIA F + D Y M++ S ++P+
Sbjct: 521 IDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMS-VKPD 579
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+FT+ +L AC ++G G+ H Q I++ S + + ++L+ MY KCGN++++ VF
Sbjct: 580 NFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFE 639
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
KD V+WN+MI GYAQHGL A+ FE M + V+P+ TF+ ++ +C H G +++
Sbjct: 640 KAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDK 699
Query: 356 GKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------- 407
G YF++M ++GL+P+++HYSC++D++GR+G + EA I++MP +AVIW
Sbjct: 700 GLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSIC 759
Query: 408 ----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
+A + L LEPE ++ + L+N+YA W + + +RK+M+ LK PG
Sbjct: 760 KIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPG 819
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH---EEKVDDASHK 514
CSWIE+ + V+ F +K++ R EI +L L+D+MK +GY+P++ +E+ ++ K
Sbjct: 820 CSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGYIPDIDFLIDEESEEYEQK 879
Query: 515 RTE 517
+E
Sbjct: 880 ASE 882
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 154/297 (51%), Gaps = 4/297 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS A ++C S + G L++++ +N+ V +S++ +Y KC + +A +F+EM
Sbjct: 381 LSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME 440
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+ VSW A+IAA Q + L L+ M +EP+ FT+ S+L AC+ AL G
Sbjct: 441 RRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGME 500
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + I+ G V +LI MYCKCG +EEA + + + + +VSWN++IAG+
Sbjct: 501 IHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKH 560
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ A F EM+K VKPD T+ V+ +C + V GK + K L ++ S
Sbjct: 561 SEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITST 620
Query: 378 VVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAAESRLLLEPECAATHVQLANL 430
+VD+ + G ++++ ++ P + NA+I A+ L E +QL N+
Sbjct: 621 LVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENV 677
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 149/291 (51%), Gaps = 4/291 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + ++ + + V S ++ SC ++ G A++ F +++ VG++ + +
Sbjct: 262 LELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDM 321
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + DA ++F +P ++ + AII + + L+ ++++ S L N+ +
Sbjct: 322 YAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISL 381
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+ SAC GR H +++ S I VANS++ MY KC + EA +F+ M
Sbjct: 382 SGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMER 441
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D VSWN++IA + Q+G ++LF M++ R++PD T+ V+ +C + G
Sbjct: 442 RDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEI 501
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYP-NAVI 406
+ + K GL + ++D+ + G++EEA+ D I+Q + NA+I
Sbjct: 502 HNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAII 552
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 146/296 (49%), Gaps = 2/296 (0%)
Query: 115 DVEKLISMHHDLHR-ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
+ K I + D+ R E + D + + + +C + G L +R GF +V G
Sbjct: 155 ECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTG 214
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
S+L+ +Y+KC+ + D+ K+F E+PV+N V W+AIIA Q + + LEL++ M+ +
Sbjct: 215 SALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIG 274
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ + S+ +C G AL G H ++ F S I V + + MY KCG++ +A +
Sbjct: 275 VSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRI 334
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
FN++ + +N++I G ++ A+ F+ ++K + + I+ G S+C
Sbjct: 335 FNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGD 394
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+G+ K L+ + + ++D+ G+ L EA +M +AV W A
Sbjct: 395 LDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME-RRDAVSWNA 449
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 142/316 (44%), Gaps = 36/316 (11%)
Query: 127 HRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI 186
++ +L S + C +++ G I +GFI +VY+ + L+ +Y +C +
Sbjct: 35 NQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHL 94
Query: 187 IDAYKVFEEM-------------------------------PVRNVVSWTAIIAAFAQEW 215
AYKVFE+M P R+VVSW ++++ F Q
Sbjct: 95 NYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNG 154
Query: 216 QVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
+ ++++ M R+ + + TF +L AC+ G G H +RMGF+ +
Sbjct: 155 ECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTG 214
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
++L+ MY KC +++++ +F+ + K+ V W+++IAG Q+ + ++LF+EM K +
Sbjct: 215 SALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIG 274
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
+ V SC ++ G K ++ + +D+ + G L +A+
Sbjct: 275 VSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRI 334
Query: 395 IKQMPIYP----NAVI 406
+P + NA+I
Sbjct: 335 FNSLPKHSLQCYNAII 350
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 45/210 (21%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF+ I+ C+ +L G+ AH + I GF + ++N L+ MY +C ++ A VF M
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 298 HGKDIVSWNSMIAGYA-------------------------------QHGLAVRAIDLFE 326
+D++S+N+MI+GYA Q+G ++ID+F
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 327 EMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY------SCVV 379
+M + + V D TF V+ +C ++E+G + + HGL + Y S ++
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKAC---SVLEDGGL---GIQVHGLIVRMGFYKDVVTGSALL 218
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
D+ + L+++ ++P+ N V W A
Sbjct: 219 DMYAKCKRLDDSLKIFSEIPV-KNWVCWSA 247
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 245/435 (56%), Gaps = 38/435 (8%)
Query: 93 TGTNSTFGS-SNVFDQLLDTPVVDVEKLI------SMHHD-------LHRERLKVDASFL 138
TG+++ S VFD++++ VV L+ HH+ + RE + D+ L
Sbjct: 115 TGSSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTL 174
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S+ + +++ G+ A+R GF +V+VGSSLI +Y+ C + KVF+ +PV
Sbjct: 175 SSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPV 234
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+ + W +++A AQ V+ L ++R M + + P TF+S++ C +L G+
Sbjct: 235 RDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQL 294
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H IR GF + +++SLI MYCKCG + A ++F+ M D+VSW +MI GYA HG A
Sbjct: 295 HAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPA 354
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSC 377
A+ LFE M KP+ ITFL V+++C H GLV++G YF SM+ H G+ P L+H +
Sbjct: 355 REALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAA 414
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPEC 420
+ D+LGRAG L+EA +FI +M I P A +W E A+ + LEP
Sbjct: 415 LADILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRS 474
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN--- 477
+HV L+N+Y+ W++AA +RK M+ KG+K +P CSWIE+ N ++ F A D+S+
Sbjct: 475 IGSHVVLSNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKNKLHVFVAHDRSHPCC 534
Query: 478 ---TRLSEILPVLDF 489
+ LSE L + F
Sbjct: 535 IECSTLSEHLAAIIF 549
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 21/299 (7%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK------- 182
R V AS L A+ SC + GA LAIR+G A+ + ++L+ LY K
Sbjct: 47 RSSVPAS-LPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLH 105
Query: 183 ------------CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
+ KVF+EM R+VVSW ++ A+E + L L R M
Sbjct: 106 STGVTSVGGTGSSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWRE 165
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
P+ FT +S+L + +G H +R GF + + V +SLI MY C + +
Sbjct: 166 GFRPDSFTLSSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYS 225
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
V VF+N+ +D + WNS++AG AQ+G A+ +F M++ V+P +TF +I C +
Sbjct: 226 VKVFDNLPVRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNL 285
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ GK + + G + + S ++D+ + G + A +M P+ V W A
Sbjct: 286 ASLRFGKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRM-CSPDVVSWTA 343
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 22/234 (9%)
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF--TFTSILSACTGSGALGQ 254
P +SW I A + + L+ MR + + + L +C G
Sbjct: 10 PWPPPLSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSAL 69
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCK--CG-----------------NVEEAVYVFN 295
G S H IR G F+ AN+L+++YCK C +E VF+
Sbjct: 70 GASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFD 129
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M +D+VSWN+++ G A+ G A+ L +M ++ +PD+ T V+ V+
Sbjct: 130 EMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKR 189
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G ++G ++ S ++D+ + + +P+ + ++W +
Sbjct: 190 GSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DPILWNS 242
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 151/400 (37%), Positives = 233/400 (58%), Gaps = 19/400 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + +D L + + +CG+ + + G ++ GF ++++VG++L +YSK +
Sbjct: 136 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 195
Query: 189 AYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A VF + RNVVS+T +I + + Q++ L ++ +R +EPN+FTF+S++ AC
Sbjct: 196 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 255
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
AL QG H Q +++ F V++ L+ MY KCG +E+A+ F+ + ++WNS
Sbjct: 256 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNS 315
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-H 366
+++ + QHGL AI +FE M+ + VKP+AITF+ +++ C H GLVEEG YF SM K +
Sbjct: 316 LVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 375
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EA 409
G+ P +HYSCV+DLLGRAG L+EA++FI +MP PNA W A
Sbjct: 376 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLA 435
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
AE + LEP+ + V L+N+YA R W+ VR M+D +K PG SW+++ +
Sbjct: 436 AEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHV 495
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
F AED S+ R S I LD L+DQ+K GYVP +D
Sbjct: 496 FGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLD 535
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 179/365 (49%), Gaps = 30/365 (8%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+A+ +C S +I G CLA++ G + ++VGS+L +YSKC + DA KVFEEMP
Sbjct: 44 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 103
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ VSWTA+I +++ + + L ++ M + + + S L AC A GRS
Sbjct: 104 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 163
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN-NMHGKDIVSWNSMIAGYAQHG 316
H +++GF S I V N+L MY K G++E A VF + +++VS+ +I GY +
Sbjct: 164 VHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETE 223
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+ + +F E+ +Q ++P+ TF +I +C + +E+G + K + S
Sbjct: 224 QIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSS 283
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRC 436
+VD+ G+ GLLE+A ++ P + W + L +++
Sbjct: 284 ILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNS-----------------LVSVFGQHGL 325
Query: 437 WDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKT 496
A ++ + M D+G+K N ++I ++ S+ L E LD+ KT
Sbjct: 326 GKDAIKIFERMVDRGVKPN-AITFISLLTGC--------SHAGLVE--EGLDYFYSMDKT 374
Query: 497 LGYVP 501
G VP
Sbjct: 375 YGVVP 379
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP RN+VSWTA+I+ +Q + + + MR P F F+S + AC G++ G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ HC ++ G S + V ++L MY KCG + +A VF M KD VSW +MI GY++
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G A+ F++M+ + V D + +C + G+ S+ K G + ++
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 376 SCVVDLLGRAGLLEEARD 393
+ + D+ +AG +E A +
Sbjct: 181 NALTDMYSKAGDMESASN 198
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +++VSW +MI+G +Q+ AI F M P F I +C G +E G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K K G+ EL S + D+ + G + +A ++MP + V W A
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPC-KDEVSWTA 112
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 238/417 (57%), Gaps = 22/417 (5%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
VE+ +++ + R ++ D + V +C + + G I++G + +VGS+
Sbjct: 454 VEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSA 513
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+I +Y KC ++++A K+ E + R VSW +II+ F+ E Q + L + M + P+
Sbjct: 514 IIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPD 573
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+FT+ ++L C + G+ H Q +++ S + +A++++ MY KCGN++++ +F
Sbjct: 574 NFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFE 633
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+D V+W++MI YA HGL AI LFEEM Q VKP+ F+ V+ +C H G V++
Sbjct: 634 KAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDK 693
Query: 356 GKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------- 407
G YF M H GL P+++HYSC+VDLLGR+G + EA + I+ MP + VIW
Sbjct: 694 GLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGIC 753
Query: 408 ----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
+AA S L L+P+ ++ +V L+N+YA W + A++R MK+ LK PG
Sbjct: 754 RLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPG 813
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH----EEKVDD 510
CSWI++ + V+ F DK++ R EI LVD+MK GYVPE+ +E+VD+
Sbjct: 814 CSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDE 870
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 156/294 (53%), Gaps = 1/294 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + + L + L D LS A+T+C + + G LA++ G N+ V ++
Sbjct: 353 VLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANT 412
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++ +Y+KC +++A +F++M +++ VSW AIIAA Q V+ L L+ M S +EP+
Sbjct: 413 ILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPD 472
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
D+TF S++ AC G AL G H + I+ G V +++I MYCKCG + EA +
Sbjct: 473 DYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHE 532
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ + VSWNS+I+G++ A+ F M++ V PD T+ V+ C + VE
Sbjct: 533 RLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVEL 592
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GK + K L ++ S +VD+ + G ++++R ++ P + V W A
Sbjct: 593 GKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSA 645
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 136/264 (51%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + V + ++A SC G A++T F + VG++ + +Y+KC ++D
Sbjct: 265 EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVD 324
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A KVF P S A+I +A++ QV LE++R ++ S L+ ++ + + L+AC+
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSA 384
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+G H ++ G I VAN+++ MY KCG + EA +F++M KD VSWN++
Sbjct: 385 IKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAI 444
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
IA + Q+ + LF M++ ++PD TF V+ +C + G + K G+
Sbjct: 445 IAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGM 504
Query: 369 KPELDHYSCVVDLLGRAGLLEEAR 392
+ S ++D+ + G+L EA
Sbjct: 505 GLDWFVGSAIIDMYCKCGMLVEAE 528
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 158/337 (46%), Gaps = 26/337 (7%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFL 138
+ G + + +FD + + VV ++S + + HR+ +++ D +
Sbjct: 114 YAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATF 173
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ + +C + G CLAI+ GF ++V G++L+ +YS C+ + A+ +F EMP
Sbjct: 174 AVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPE 233
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
RN V W+A+IA + + + L+LY++M + + + TF S +C G A G
Sbjct: 234 RNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQL 293
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H ++ F V + + MY KC + +A VFN S N++I GYA+
Sbjct: 294 HAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQV 353
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL--KPELDHYS 376
+ A+++F + K + D I+ G +++C K Y + + HGL K LD
Sbjct: 354 LEALEIFRSLQKSYLDFDEISLSGALTAC------SAIKGYLEGIQLHGLAVKCGLDFNI 407
Query: 377 CV----VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
CV +D+ + G L EA M I +AV W A
Sbjct: 408 CVANTILDMYAKCGALMEACLIFDDMEI-KDAVSWNA 443
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 39/290 (13%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C + + I G TGF+ V+V + L+ Y KC + A+ VF++MP R+V+SW
Sbjct: 48 CSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISW 107
Query: 205 TAIIAAFAQEWQVDMCLELYRMMR-------NSMLE---PNDF----------------- 237
+I +A ++ L+ M NSML N F
Sbjct: 108 NTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQ 167
Query: 238 ----TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
TF +L ACTG G G HC I+MGF S + +L+ MY C ++ A +
Sbjct: 168 HDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNI 227
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M ++ V W+++IAGY ++ + L++ M+ + + TF SC
Sbjct: 228 FCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAF 287
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCV----VDLLGRAGLLEEARDFIKQMP 399
E G + + LK + + V +D+ + + +AR P
Sbjct: 288 ELGT----QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
++ + N M TF+ I C+ A+ G+ AH Q GF + V+N L+ YC
Sbjct: 25 IHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYC 84
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA----------------------------- 313
KC N+ A VF+ M +D++SWN+MI GYA
Sbjct: 85 KCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSC 144
Query: 314 --QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG-KVYFDSMA-KHGLK 369
Q+G ++I++F +M ++ D TF V+ +C G+ + G + +A + G
Sbjct: 145 YLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACT--GIEDYGLGLQVHCLAIQMGFD 202
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + +VD+ L+ A + +MP N+V W A
Sbjct: 203 SDVVTGTALVDMYSTCKKLDHAFNIFCEMP-ERNSVCWSA 241
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 237/404 (58%), Gaps = 18/404 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ I ++ + LK+D + + +CG I G IRT F ++YVGS+L
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y KC+ + A VF+ M +NVVSWTA++ + Q + + ++++ M+ S ++P+
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+T +SAC +L +G H + I G Y+ V+NSL+++Y KCG+++++ +FN
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M+ +D VSW +M++ YAQ G AV I LF++M++ +KPD +T GVIS+C GLVE+G
Sbjct: 432 MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 357 KVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
+ YF M +++G+ P + HYSC++DL R+G LEEA FI MP P+A+ W
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAES + L+P A + L+++YA WD A++R+ M++K +K PG
Sbjct: 552 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQ 611
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SWI+ ++ F A+D+S+ L +I L+ L +++ GY P+
Sbjct: 612 SWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPD 655
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 141/305 (46%), Gaps = 31/305 (10%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L T + S ++ G I+ GF + + VGS L+ +Y+ I DA KVF +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 198 VRNVV------------------------------SWTAIIAAFAQEWQVDMCLELYRMM 227
RN V SW A+I AQ +E +R M
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ L+ + + F S+L AC G GA+ +G+ H IR F +I V ++LI MYCKC +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
A VF+ M K++VSW +M+ GY Q G A A+ +F +M + + PD T IS+C
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ +EEG + GL + + +V L G+ G ++++ +M + +AV W
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSW 440
Query: 408 EAAES 412
A S
Sbjct: 441 TAMVS 445
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 125/273 (45%), Gaps = 34/273 (12%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MM 227
N++ ++L+ YSK +I + FE++P R+ V+W +I ++ V ++ Y MM
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK---- 283
R+ T ++L + +G + G+ H Q I++GF SY+ V + L+ MY
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 284 ---------------------------CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
CG +E+A+ +F M KD VSW +MI G AQ+G
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNG 249
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
LA AI+ F EM Q +K D F V+ +C G + EGK + + + + S
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ + L A+ +M N V W A
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTA 341
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 230/398 (57%), Gaps = 20/398 (5%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R+ ++ + A + GS R+ G LA++ G I++V+VG S +YSK
Sbjct: 98 NMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAG 157
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ +A K+F+EMP RN+ +W A ++ E + D L + R +EP DF +S+LS
Sbjct: 158 LTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLS 217
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC G L G+S H ++ I V ++L+ MY KCG++E+A F+ M +++V+
Sbjct: 218 ACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVT 277
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMM--KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
WN+MI GYA G A A+ LF+EM RV P+ +TF+ V+S+C G V G F+S
Sbjct: 278 WNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFES 337
Query: 363 M-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------------- 408
M ++G++P +HY+CVVDLLGRAG++E+A FIK+MPI P +W
Sbjct: 338 MRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 397
Query: 409 ----AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIM 464
AA++ L+P + HV L+N++A W++A VRK MKD G+K GCSWI
Sbjct: 398 LGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAG 457
Query: 465 NVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
N V+ F+A+D S+ R SEI +L L +M+ GY+P+
Sbjct: 458 NAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPD 495
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 127/281 (45%), Gaps = 18/281 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRT------GFIANVYVGSSLITLYSKCRVIIDAYK 191
L++ V S ST+ R G I+T FI N L+ +YSK A
Sbjct: 9 LASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYN-----HLVNMYSKLDRPNSAQL 63
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+ P R+VV+WTA+IA Q + L + MR ++PNDFTF A SG+
Sbjct: 64 LLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKA---SGS 120
Query: 252 LGQ---GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
L G+ H ++ G S + V S MY K G EEA +F+ M ++I +WN+
Sbjct: 121 LRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY 180
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
++ G A+ F E K+ ++P V+S+C ++E GK K +
Sbjct: 181 LSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACV 240
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S +VD+ G+ G +E+A +MP N V W A
Sbjct: 241 VGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWNA 280
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/438 (34%), Positives = 244/438 (55%), Gaps = 53/438 (12%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M D+H + D + +S+ + + G ++ G I+ G +++ V S+LI +
Sbjct: 235 VLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDM 294
Query: 180 YSKCRVIIDAYKVFEEM-----------------------PVR------------NVVSW 204
Y KC + +VF++M +R NVVSW
Sbjct: 295 YGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSW 354
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
T++IA +Q + LEL+R M+ + ++PN T +L AC AL G++AHC ++R
Sbjct: 355 TSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLR 414
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G + + V ++LI MY KCG ++ + F+ + K++V WN++IAGYA HG A A+++
Sbjct: 415 RGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEI 474
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLG 383
F+ M + KPD I+F V+S+C GL EEG YF+SM +K+G++ ++HY+C+V LL
Sbjct: 475 FDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLS 534
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQ 426
RAG LE+A I++MP+ P+A +W AAE LEP ++
Sbjct: 535 RAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYIL 594
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
L+N+YA W++ RVR +MK+KGL+ NPGCSWIE+ N V+ A DKS+ ++++I+
Sbjct: 595 LSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEN 654
Query: 487 LDFLVDQMKTLGYVPEVH 504
LD L +MK LGY PE++
Sbjct: 655 LDKLSMEMKKLGYFPEIN 672
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++TG + ++ + L++ Y+ DA V + +P NV S++ +I AF++ Q L
Sbjct: 40 LKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHAL 99
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+ M L P++ S + AC G AL R H GF S V +SL+ MY
Sbjct: 100 STFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMY 159
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KC + +A VF+ M D+VSW++++A YA+ G A LF EM V+P+ I++
Sbjct: 160 IKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWN 219
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
G+I+ H GL E + F M G +P+ S V+ +G
Sbjct: 220 GMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVG 261
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 173/444 (38%), Gaps = 89/444 (20%)
Query: 51 VLDIISPRTRDSTKT-EVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLL 109
+L+ ++ T ++T + H +++ L D+ HL ++ +H N F + + L+
Sbjct: 18 ILNCLNSTTASLSQTRQAHAHILKTGLFNDT-HLATKLLSH--YANNMCFADATLVLDLV 74
Query: 110 DTP--------VVDVEKLISMHHDLHR------ERLKVDASFLSTAVTSCGSTRNIRGGA 155
P + K HH L L D L +AV +C ++
Sbjct: 75 PEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPAR 134
Query: 156 PYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM------------------- 196
+A +GF ++ +V SSL+ +Y KC I DA++VF+ M
Sbjct: 135 QVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQG 194
Query: 197 ----------------PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
N++SW +IA F + ++ M EP+ T +
Sbjct: 195 CVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTIS 254
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S+L A L G H I+ G S V+++LI MY KC E VF+ M
Sbjct: 255 SVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHM 314
Query: 301 D-----------------------------------IVSWNSMIAGYAQHGLAVRAIDLF 325
D +VSW SMIA +Q+G + A++LF
Sbjct: 315 DVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELF 374
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
EM VKP+++T ++ +C + + GK + G+ ++ S ++D+ +
Sbjct: 375 REMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKC 434
Query: 386 GLLEEARDFIKQMPIYPNAVIWEA 409
G ++ +R +P N V W A
Sbjct: 435 GRIQASRICFDGIPT-KNLVCWNA 457
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 113/289 (39%), Gaps = 39/289 (13%)
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
++L+ T + L++ T S L Q R AH ++ G F+ +A L+S Y +
Sbjct: 9 ALLDSVQHTILNCLNSTTAS--LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFAD 66
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A V + + ++ S++++I +++ A+ F +M+ + + PD + +C
Sbjct: 67 ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAG 126
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + + G + S +V + + + +A +M P+ V W A
Sbjct: 127 LSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSA 185
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW--------- 460
L YA C D+A R+ M D G++ N SW
Sbjct: 186 -----------------LVAAYARQGCVDEAKRLFSEMGDSGVQPNL-ISWNGMIAGFNH 227
Query: 461 ------IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL---GYV 500
+M + R + T +S +LP + L D + + GYV
Sbjct: 228 SGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYV 276
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/400 (37%), Positives = 231/400 (57%), Gaps = 19/400 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + +D L + + +CG+ + + G ++ GF ++++VG++L +YSK +
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 260
Query: 189 AYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A VF + RNVVS+T +I + + Q++ L ++ +R +EPN+FTF+S++ AC
Sbjct: 261 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
AL QG H Q +++ F V++ L+ MY KCG +E A+ F+ + ++WNS
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNS 380
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-H 366
+++ + QHGL AI FE M+ + VKP+AITF+ +++ C H GLVEEG YF SM K +
Sbjct: 381 LVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 440
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EA 409
G+ P +HYSCV+DLLGRAG L+EA++FI +MP PNA W A
Sbjct: 441 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLA 500
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
AE + LEP+ + V L+N+YA R W+ VR M+D +K PG SW+++ +
Sbjct: 501 AEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHV 560
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
F AED S+ R S I LD L+DQ+K GYVP +D
Sbjct: 561 FGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLD 600
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 177/365 (48%), Gaps = 30/365 (8%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+A+ +C S +I G CLA++ G + ++VGS+L +YSKC + DA KVFEEMP
Sbjct: 109 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ VSWTA+I +++ + + L ++ M + + + S L AC A GRS
Sbjct: 169 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 228
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN-NMHGKDIVSWNSMIAGYAQHG 316
H +++GF S I V N+L MY K G++E A VF + +++VS+ +I GY +
Sbjct: 229 VHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETE 288
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+ + +F E+ +Q ++P+ TF +I +C + +E+G + K + S
Sbjct: 289 QIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSS 348
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRC 436
+VD+ G+ GLLE A ++ P + W + L +++
Sbjct: 349 ILVDMYGKCGLLEHAIQAFDEIG-DPTEIAWNS-----------------LVSVFGQHGL 390
Query: 437 WDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKT 496
A + + M D+G+K N ++I ++ S+ L E LD+ KT
Sbjct: 391 GKDAIKFFERMVDRGVKPN-AITFISLLTGC--------SHAGLVE--EGLDYFYSMDKT 439
Query: 497 LGYVP 501
G VP
Sbjct: 440 YGVVP 444
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 133/260 (51%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + L+ + + T+ +R G L I G+ ++ + L+ +YSKC + A K+F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ MP RN+VSWTA+I+ +Q + + + MR P F F+S + AC G++
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ HC ++ G S + V ++L MY KCG + +A VF M KD VSW +MI GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ G A+ F++M+ + V D + +C + G+ S+ K G + ++
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243
Query: 374 HYSCVVDLLGRAGLLEEARD 393
+ + D+ +AG +E A +
Sbjct: 244 VGNALTDMYSKAGDMESASN 263
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L +G+ H I G+ + N L++MY KCG ++ A+ +F+ M +++VSW +MI+G
Sbjct: 21 LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+Q+ AI F M P F I +C G +E GK K G+ E
Sbjct: 81 LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L S + D+ + G + +A ++MP + V W A
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPC-KDEVSWTA 177
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/383 (38%), Positives = 224/383 (58%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + + +C ++ G C I+ G + ++ +G++L+++Y+KC VI DA + F+ M
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMN 374
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ VS++AI++ Q + L ++RMM+ S ++P+ T +L AC+ AL G
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+H I GF + + N+LI MY KCG + A VFN M DIVSWN+MI GY HGL
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 494
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
+ A+ LF +++ +KPD ITF+ ++SSC H GLV EG+++FD+M++ + P ++H
Sbjct: 495 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL-----------------LEPE 419
C+VD+LGRAGL++EA FI+ MP P+ IW A S L PE
Sbjct: 555 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
V L+N+Y+ WD AA +R KD GLK PGCSWIEI +V+ F D+S+ +
Sbjct: 615 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQ 674
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
LS+I L+ L+ +MK LGY E
Sbjct: 675 LSQINRKLEELLVEMKRLGYQAE 697
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 150/285 (52%), Gaps = 2/285 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E + ++S + + + G + + G +R F V VG+ L+ +Y+KC+
Sbjct: 201 MQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQC 260
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILS 244
++ A K+F+ M VRN VSW+A+I + + LEL+ +M+ ++P T S+L
Sbjct: 261 LLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLR 320
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC L +GR HC I++G I + N+L+SMY KCG +++A+ F+ M+ KD VS
Sbjct: 321 ACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVS 380
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
++++++G Q+G A A+ +F M + PD T LGV+ +C H ++ G +
Sbjct: 381 FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI 440
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G + + ++D+ + G + AR+ +M + + V W A
Sbjct: 441 VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH-DIVSWNA 484
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
A+ V L LY C ++ A ++F+E+P +V+ W II A+A D ++LY M
Sbjct: 41 ADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSM 100
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ + PN +T+ +L AC+G A+ G H G S + V +L+ Y KCG +
Sbjct: 101 LHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGIL 160
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
EA +F++M +D+V+WN+MIAG + +GL A+ L +M ++ + P++ T +GV+ +
Sbjct: 161 VEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTV 220
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ GK + + + ++D+ + L AR M + N V W
Sbjct: 221 GEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR-NEVSW 279
Query: 408 EA 409
A
Sbjct: 280 SA 281
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 158/347 (45%), Gaps = 16/347 (4%)
Query: 66 EVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVV----------- 114
++H +++ DS L K + N + +FD++ + V+
Sbjct: 29 KIHQHFLKNTSNADSSVL--HKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAW 86
Query: 115 --DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
+ I ++H + ++ + + +C I G A G ++V+V
Sbjct: 87 NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
++L+ Y+KC ++++A ++F M R+VV+W A+IA + D ++L M+ +
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGI 206
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN T +L + ALG G++ H +R F + + V L+ MY KC + A
Sbjct: 207 CPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARK 266
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGG 351
+F+ M ++ VSW++MI GY A++LF++M +K + P +T V+ +C
Sbjct: 267 IFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLT 326
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ G+ + K G ++ + ++ + + G++++A F M
Sbjct: 327 DLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXM 373
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+ +L AC S +L + + H ++ + V + L +Y C V A +F+ +
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
++ WN +I YA +G AIDL+ M+ V+P+ T+ V+ +C G L E
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS-GLLAIEDG 128
Query: 358 VYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
V S AK GL+ ++ + +VD + G+L EA+ M + + V W A
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNA 180
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + + +C ++ G I GF + + ++LI +YSKC I A +VF
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 471
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
M ++VSW A+I + L L+ + L+P+D TF +LS+C+ SG +
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVM 531
Query: 254 QGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAG 311
+GR R ++ ++ + + G ++EA + NM D+ W+++++
Sbjct: 532 EGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591
Query: 312 YAQHGLAVRAIDLFEEMMK--QRVKPDA 337
H + I+L EE+ K Q + P++
Sbjct: 592 CRIH----KNIELGEEVSKKIQSLGPES 615
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/412 (36%), Positives = 235/412 (57%), Gaps = 27/412 (6%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L + + C R++ G ++ GF + VGSSL +Y K + D K+
Sbjct: 193 DEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLI 252
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ MP+R VV+W +IA AQ + L Y MM+ + P+ TF S+LSAC+ LG
Sbjct: 253 KSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLG 312
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
QG+ H + I+ G S + V +SLISMY + G +E+++ F + D+V W+SMIA Y
Sbjct: 313 QGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYG 372
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPEL 372
HG A++LF +M +++ + +TFL ++ +C H GL E+G YFD M K+ LKP +
Sbjct: 373 FHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRI 432
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLL 415
+HY+CVVDLLGRAG LEEA I+ MP+ P+ +IW+ +E +
Sbjct: 433 EHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIK 492
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L+P AA++V L+N++A R W +++RK M+D+ ++ PG SW+E+ N+V++F DK
Sbjct: 493 LDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDK 552
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPEV--------HEEKVDDASHKRTEPF 519
S+ + EI L L+ ++K GYVPE+ +EEK + +H +E F
Sbjct: 553 SHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAH-HSEKF 603
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 145/322 (45%), Gaps = 34/322 (10%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I +D + D S S + SC ++ GG L I +G + ++ + L+
Sbjct: 47 IKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNF 106
Query: 180 YSKC---------------------RVIIDAY----------KVFEEMPVRNVVSWTAII 208
YSK ++I+ Y K+F+EM RN+ +W A+I
Sbjct: 107 YSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMI 166
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
A Q L L++ M P++FT S+L C G +L G+ H ++ GF
Sbjct: 167 AGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFE 226
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
V +SL MY K G++ + + +M + +V+WN++IAG AQ+G ++ + M
Sbjct: 227 LSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMM 286
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
+PD ITF+ V+S+C + +G+ + K G L S ++ + R+G L
Sbjct: 287 KMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCL 346
Query: 389 EEA-RDFIKQMPIYPNAVIWEA 409
E++ + F+ + + V+W +
Sbjct: 347 EDSIKAFVDRENF--DVVLWSS 366
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/438 (34%), Positives = 244/438 (55%), Gaps = 53/438 (12%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M D+H + D + +S+ + + G ++ G I+ G +++ V S+LI +
Sbjct: 235 VLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDM 294
Query: 180 YSKCRVIIDAYKVFEEM-----------------------PVR------------NVVSW 204
Y KC + +VF++M +R NVVSW
Sbjct: 295 YGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSW 354
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
T++IA +Q + LEL+R M+ + ++PN T +L AC AL G++AHC ++R
Sbjct: 355 TSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLR 414
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G + + V ++LI MY KCG ++ + F+ + K++V WN++IAGYA HG A A+++
Sbjct: 415 RGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEI 474
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLG 383
F+ M + KPD I+F V+S+C GL EEG YF+SM +K+G++ ++HY+C+V LL
Sbjct: 475 FDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLS 534
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQ 426
RAG LE+A I++MP+ P+A +W AAE LEP ++
Sbjct: 535 RAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYIL 594
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
L+N+YA W++ RVR +MK+KGL+ NPGCSWIE+ N V+ A DKS+ ++++I+
Sbjct: 595 LSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEK 654
Query: 487 LDFLVDQMKTLGYVPEVH 504
LD L +MK LGY PE++
Sbjct: 655 LDKLSMEMKKLGYFPEIN 672
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++TG + ++ + L++ Y+ DA V + +P NV S++ +I AF++ Q L
Sbjct: 40 LKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHAL 99
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+ M L P++ S + AC G AL R H GF S V +SL+ MY
Sbjct: 100 STFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMY 159
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KC + +A VF+ M D+VSW++++A YA+ G A LF EM V+P+ I++
Sbjct: 160 IKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWN 219
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
G+I+ H GL E + F M G +P+ S V+ +G
Sbjct: 220 GMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVG 261
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 165/432 (38%), Gaps = 88/432 (20%)
Query: 62 STKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTP--------V 113
S + H +++ L D+ HL ++ +H N F + + L+ P +
Sbjct: 30 SQTRQAHAHILKTGLFNDT-HLATKLLSH--YANNMCFADATLVLDLVPEPNVFSFSTLI 86
Query: 114 VDVEKLISMHHDLHR------ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI 167
K HH L L D L +AV +C ++ +A +GF
Sbjct: 87 YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEM------------------------------- 196
++ +V SSL+ +Y KC I DA++VF+ M
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206
Query: 197 ----PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
N++SW +IA F + ++ M EP+ T +S+L A L
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDL 266
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD----------- 301
G H I+ G S V+++LI MY KC E VF+ M D
Sbjct: 267 VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326
Query: 302 ------------------------IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+VSW SMIA +Q+G + A++LF EM VKP++
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNS 386
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
+T ++ +C + + GK + G+ ++ S ++D+ + G ++ +R
Sbjct: 387 VTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDG 446
Query: 398 MPIYPNAVIWEA 409
+P N V W A
Sbjct: 447 IPT-KNLVCWNA 457
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 113/289 (39%), Gaps = 39/289 (13%)
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
++L+ T + L++ T S L Q R AH ++ G F+ +A L+S Y +
Sbjct: 9 ALLDSVQHTIFNCLNSTTAS--LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFAD 66
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A V + + ++ S++++I +++ A+ F +M+ + + PD + +C
Sbjct: 67 ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAG 126
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + + G + S +V + + + +A +M P+ V W A
Sbjct: 127 LSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSA 185
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW--------- 460
L YA C D+A R+ M D G++ N SW
Sbjct: 186 -----------------LVAAYARQGCVDEAKRLFSEMGDSGVQPNL-ISWNGMIAGFNH 227
Query: 461 ------IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL---GYV 500
+M + R + T +S +LP + L D + + GYV
Sbjct: 228 SGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYV 276
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 245/433 (56%), Gaps = 31/433 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKL-------------ISMHHDLHRERLKVDASFLSTAVTSCGS 147
+ ++FDQ+LD ++ + S+ +L L D S+ + +C S
Sbjct: 83 AHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACAS 142
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
++ +R G C A++ G N+Y+ +LI +Y++C + A VF+EM +VS+ AI
Sbjct: 143 SKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAI 202
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I +A+ Q + L L+R ++ S +EP D T S++ +C GAL G+ H + GF
Sbjct: 203 ITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGF 262
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
Y++V +LI M+ KCG++ +A+ +F M +D +W++MI +A HG ++AI +FEE
Sbjct: 263 DKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEE 322
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
M ++ V+PD ITFLG++ +C H GLVE+G+ YF SM+K +G+ P + HY C+VDLLGRAG
Sbjct: 323 MKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAG 382
Query: 387 LLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLAN 429
L+EA +F+ ++ I ++W E L+ +V L+N
Sbjct: 383 HLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSN 442
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
LYA V W+ +RKLMKD+G+ PGCS +E+ NVV+ F + D + E+ LD
Sbjct: 443 LYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDE 502
Query: 490 LVDQMKTLGYVPE 502
L+ ++K +GYVP+
Sbjct: 503 LMKEIKLVGYVPD 515
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 239/440 (54%), Gaps = 57/440 (12%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN----VYVGSSLITLYSKCRVI 186
++ D +T +++C + + + G ++ N + V ++LITLY K +
Sbjct: 285 IQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKV 344
Query: 187 IDAYKVFEEMPVRNVVSWTAIIAAF-------------------------------AQEW 215
+A K+F MPVRN+++W AI++ + AQ
Sbjct: 345 DEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNG 404
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
D L+L++ MR EP DF F L+AC+ GAL GR H Q + +G+ S + V N
Sbjct: 405 FGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGN 464
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
++ISMY KCG VE A VF M D+VSWNSMIA QHG V+AI+LF++M+K+ V P
Sbjct: 465 AMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFP 524
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDF 394
D ITFL V+++C H GLVE+G+ YF+SM + +G+ P DHY+ +VDL RAG+ AR
Sbjct: 525 DRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIV 584
Query: 395 IKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCW 437
I MP P A +W EAAE L P+ T+V L+N+YA V W
Sbjct: 585 IDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRW 644
Query: 438 DQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
++ A+VRKLM+D+ ++ P CSWIE+ N V+ F +D + + + L+ L +MK L
Sbjct: 645 NEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKL 704
Query: 498 GYVPE----VHEEKVDDASH 513
GY+P+ +H+ + + H
Sbjct: 705 GYIPDTKFVLHDMEYEQKEH 724
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 64/321 (19%)
Query: 158 QCLAIRTGF-IANVYVGSSLITLYSK--------CRVIIDAYKVFEEMPVRNVVSWTAII 208
C ++TG + V ++L+++Y K C ++ A K+F+EMP R+ ++WT +I
Sbjct: 171 HCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMI 230
Query: 209 AAFAQE--------------------WQVDM-----------CLELYRMMRNSMLEPNDF 237
+ + W + L L R MR ++ +D
Sbjct: 231 TGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDI 290
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGF---FSY-IQVANSLISMYCKCGNVEEAVYV 293
T+T+I+SAC G+ G+ H ++ S+ + V+N+LI++YCK V+EA +
Sbjct: 291 TYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKI 350
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M ++I++WN++++GY G A FEEM + + +T +IS G
Sbjct: 351 FYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL----LTLTVMISGLAQNGFG 406
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM--------------- 398
+EG F M G +P ++ + G LE R Q+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466
Query: 399 -PIYPNAVIWEAAESRLLLEP 418
+Y + EAAES + P
Sbjct: 467 ISMYAKCGVVEAAESVFVTMP 487
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 52/285 (18%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
++LIT Y + ++F P+ R+ V + A+I +A LEL+R MR
Sbjct: 83 TTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD 142
Query: 232 LEPNDFTFTSILSACT-GSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCK------ 283
P+DFTFTS+LSA G Q HC ++ G V N+L+S+Y K
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELG 202
Query: 284 --CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ---------- 331
C + A +F+ M +D ++W +MI GY ++ A ++FE M++
Sbjct: 203 ISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMIS 262
Query: 332 ---------------------RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
++ D IT+ +IS+C + G + GK + K+ L P
Sbjct: 263 GYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNP 322
Query: 371 ELDHYSC------VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+H C ++ L + ++EAR MP+ N + W A
Sbjct: 323 --NHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNA 364
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 36/156 (23%)
Query: 227 MRNSM---LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
MRN++ L N + L + + R+ H I GF N L+ MYCK
Sbjct: 1 MRNALDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCK 60
Query: 284 C-------------------------------GNVEEAVYVFNN--MHGKDIVSWNSMIA 310
GN+E +FN ++ +D V +N+MI
Sbjct: 61 SSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMIT 120
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
GYA +G A++LF M + +PD TF V+S+
Sbjct: 121 GYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA 156
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/471 (36%), Positives = 251/471 (53%), Gaps = 72/471 (15%)
Query: 101 SSNVFDQLLDTPVVDVEKLISM--HHDLHRERLKVDASFLS----------TAVTSCGST 148
+ N+ DQ+ +V LIS HH +E L V + L T V+ GS
Sbjct: 99 AHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSC 158
Query: 149 RNIRGGAP-----YQCLAIRTGFIANVYVGSSLITLYSKC---------------RVII- 187
++ GAP AI G +N+ +G++LI Y KC R ++
Sbjct: 159 ASL--GAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVS 216
Query: 188 ---------------DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
DA+ +F +M +N VSWTA+IA FAQ + D L L+ MR +
Sbjct: 217 WTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGI 276
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIR---MGFFSYIQVANSLISMYCKCGNVEE 289
P+ FTF S+LSAC + +G+ H IR + +F I + N+LI MYCKCG +
Sbjct: 277 PPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRS 336
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A +F MH KDIVSWNS+I G+AQ+G ++ +FE M++ ++P+ +TFLG++S+C H
Sbjct: 337 ATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCH 396
Query: 350 GGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV-IW 407
GLV EG DSM K +G+ P DHY+ ++DLLGR LEEA IK+ P + V +W
Sbjct: 397 TGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMW 456
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AAE LEP AA +V + N+YA WD+A +VR+LM ++
Sbjct: 457 GALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAASRWDEARQVRRLMMER 516
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
GL+ CSWIE+ N ++F A+++S+ +++E+ V+ LVDQM GY+P
Sbjct: 517 GLRKEAACSWIEVRNTRHQFVAKERSHCQINEVYEVIHNLVDQMYDSGYLP 567
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 140/331 (42%), Gaps = 75/331 (22%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S+ ++ C +TR+++ G I+T I ++ + LI YSKC I A+KVF +PV
Sbjct: 18 SSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPV 77
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMM-------RNSMLEP----------------- 234
+N SW II+A+++ + L M NS++
Sbjct: 78 KNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTM 137
Query: 235 ---------NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
++FT S++ +C GA R H I +G S I + N+LI Y KCG
Sbjct: 138 LKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCG 197
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMI-------------------------------AGYAQ 314
+ + +F+ M +D+VSW SM+ AG+AQ
Sbjct: 198 EPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQ 257
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+G A+ LFE+M ++ + P A TF V+S+C L+ GK + H ++
Sbjct: 258 NGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGK----EIHGHIIRSTCID 313
Query: 375 YSC-------VVDLLGRAGLLEEARDFIKQM 398
Y C ++D+ + G + A K M
Sbjct: 314 YFCNIFILNALIDMYCKCGQMRSATTLFKGM 344
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
S L+P ++S++S C + L G+ H I+ +AN LI Y KC +++
Sbjct: 8 SSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQS 67
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A VF+ + K+ SWN +I+ Y++ GL A +L ++M KP+ +++ +IS H
Sbjct: 68 AHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQM----PKPNLVSYNSLISGLGH 123
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G +E F +M K D ++ +V L+G L A + ++Q+
Sbjct: 124 HGFRKESLNVFKTMLKQCSNVLFDEFT-LVSLVGSCASL-GAPELLRQV 170
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 248/435 (57%), Gaps = 36/435 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGS 147
+ +VFD++ D VV +IS + + RE ++ + S+ + +C
Sbjct: 19 AQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDG 78
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
N+R C I+ G ++V+V S+LI +YS+ + +A +VF+EM ++V W++I
Sbjct: 79 LFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSI 135
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
IA FAQ D L L++ M+ + T TS+L ACTG L GR H ++ +
Sbjct: 136 IAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--Y 193
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ + N+L+ MYCKCG++E+A VF M KD++SW++MIAG AQ+G + A+ LFE
Sbjct: 194 DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFES 253
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
M +KP+ +T +GV+ +C H GLVEEG YF SM + G+ P +HY C++DLLGRAG
Sbjct: 254 MKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAG 313
Query: 387 LLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLAN 429
L EA D I +M P+AV W AA+ L L+P+ A T+V L+N
Sbjct: 314 RLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSN 373
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA + W+ A VR+ M ++G+K PGCSWIE+ ++ F D+S+ ++ EI L+
Sbjct: 374 IYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQ 433
Query: 490 LVDQMKTLGYVPEVH 504
L+ ++ +GYVP+ +
Sbjct: 434 LIYKLMGVGYVPDTN 448
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 127/234 (54%), Gaps = 10/234 (4%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y K ++ DA VF++MP RNVVSWT +I+A++ D LE +M + PN
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
FT++S+L AC G L R HC I++G S + V ++LI +Y + G +E A+ VF+
Sbjct: 66 MFTYSSVLRACDG---LFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M D+V W+S+IAG+AQ+ A+ LF+ M + T V+ +C L+E
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182
Query: 356 GKVYFDSMAKHGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G+ + H LK + D + ++D+ + G LE+A +M + + + W
Sbjct: 183 GR----QVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRM-VEKDVISW 231
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N LI+MY K G + +A VF+ M +++VSW +MI+ Y+ L +A++ M+++ V+
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
P+ T+ V+ +C GL +++ + K GL ++ S ++D+ R G LE A
Sbjct: 64 PNMFTYSSVLRAC--DGLFNLRQLHC-CIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 395 IKQMPIYPNAVIWEA 409
+M + + V+W +
Sbjct: 121 FDEM-VTGDLVVWSS 134
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 247/462 (53%), Gaps = 40/462 (8%)
Query: 82 HLDSQKFNHDFTGTNSTFG----------SSNVFDQLLDTPVVDVEKLISMH--HD---- 125
HL F HD N+ + VFD++ + V LIS + HD
Sbjct: 76 HLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFD 135
Query: 126 ---LHRERLKVDAS----FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
L + L+ S LS+ + + + R G ++ GF +NV+VGS+L+
Sbjct: 136 ALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 195
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
LY++ ++ DA VF+ + RN VSW A+IA A+ + LEL++ M P+ F+
Sbjct: 196 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFS 255
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ S+ AC+ +G L QG+ H I+ G N+L+ MY K G++ +A +F+ +
Sbjct: 256 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 315
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+D+VSWNS++ YAQHG A+ FEEM + ++P+ I+FL V+++C H GL++EG
Sbjct: 316 KRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWH 375
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
Y++ M K G+ E HY +VDLLGRAG L A FI++MPI P A IW+
Sbjct: 376 YYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHK 435
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AAE L+P+ HV L N+YA W+ AARVRK MK+ G+K P CSW+
Sbjct: 436 NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 495
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
EI N ++ F A D+ + + EI + ++ ++K LGYVP+
Sbjct: 496 EIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDT 537
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 151/284 (53%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D E L +DL + VD F +T + C + + G I++ F ++ + +
Sbjct: 31 DDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNN 90
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC + +A KVF++MP R+ V+WT +I+ ++Q + L L+ M P
Sbjct: 91 TLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSP 150
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N+FT +S++ A G H ++ GF S + V ++L+ +Y + G +++A VF
Sbjct: 151 NEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVF 210
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ + ++ VSWN++IAG+A+ +A++LF+ M+++ +P ++ + +C G +E
Sbjct: 211 DALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLE 270
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+GK M K G K + ++D+ ++G + +AR ++
Sbjct: 271 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 314
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 236/404 (58%), Gaps = 18/404 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK +S+ + + ++ D + + +C + + G I++ + +VG +L
Sbjct: 459 EKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIAL 518
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKC ++ A K+ + + + VVSW AII+ F+ + Q + + + M ++P++
Sbjct: 519 IDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 578
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ +IL C + G+ H Q I+ S ++++L+ MY KCGN+++ +F
Sbjct: 579 FTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK 638
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+D V+WN+M+ GYAQHGL A+ +FE M + VKP+ TFL V+ +C H GLVE+G
Sbjct: 639 APNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKG 698
Query: 357 KVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
YF SM + +GL P+L+HYSCVVD++GR+G + +A + I+ MP +AVIW
Sbjct: 699 LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICK 758
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
+AA S L LEPE +A +V L+N+YA W++ ++RK+M+ GLK PGC
Sbjct: 759 IHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGC 818
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SWIEI + V+ F DK++ R EI LD L D+MK +GY+P+
Sbjct: 819 SWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD 862
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 176/363 (48%), Gaps = 28/363 (7%)
Query: 66 EVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS--MH 123
E ++ Q D+ ++ F + G + +FD + + VV LIS +H
Sbjct: 94 EFAFKVFDGMPQRDTVSWNAMLFG--YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLH 151
Query: 124 HDLHRERLKV-----------DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
+ HR+ + V D + + + SC S + GG LA++ GF +V
Sbjct: 152 NGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVT 211
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
GS+L+ +Y+KC+ + + + F MP +N VSW+AIIA Q + LEL++ M+ + +
Sbjct: 212 GSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGV 271
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+ TF S+ +C G AL G H ++ F + + + + + MY KC N+ +A
Sbjct: 272 GVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQK 331
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+FN++ ++ S+N++I GYA+ + A+ +F + K + D ++ G +C
Sbjct: 332 LFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACA---- 387
Query: 353 VEEGKVYFDSMAKHGL------KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
V +G + + + HGL + + + ++D+ G+ G L EA ++M + +AV
Sbjct: 388 VIKGDL--EGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVS 444
Query: 407 WEA 409
W A
Sbjct: 445 WNA 447
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 151/298 (50%), Gaps = 8/298 (2%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+ + + ++ + + V S ++ SC +R G+ A++T F +V +G+
Sbjct: 255 DLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGT 314
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+ + +Y KC + DA K+F +P N+ S+ AII +A+ + L ++R+++ S L
Sbjct: 315 ATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGL 374
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++ + + AC +G H +++ S I VAN+++ MY KCG + EA VF
Sbjct: 375 DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 434
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +D VSWN++IA + Q+G + + LF M++ ++PD T+ V+ +C +
Sbjct: 435 EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALN 494
Query: 355 EGKVYFDSMAKHGLKPELDHYSCV--VDLLGRAGLLEEARD----FIKQMPIYPNAVI 406
G + + K L LD + + +D+ + G++E+A +Q + NA+I
Sbjct: 495 CGMEIHNRIIKSRLG--LDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAII 550
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 35/303 (11%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C + + G I T F V+V + LI +Y KC + A+KVF+ MP R+ VSW
Sbjct: 52 CSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSW 111
Query: 205 TAIIAAFAQEWQVDMCLELYRMMR-------NSMLEP----------------------- 234
A++ +A + + +L+ M NS++
Sbjct: 112 NAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTV 171
Query: 235 -NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ TF +L +C+ G G H ++MGF + ++L+ MY KC ++ ++
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF 231
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F++M K+ VSW+++IAG Q+ ++LF+EM K V TF V SC +
Sbjct: 232 FHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSAL 291
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP----NAVIWEA 409
G K ++ + +D+ + L +A+ +P + NA+I
Sbjct: 292 RLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGY 351
Query: 410 AES 412
A S
Sbjct: 352 ARS 354
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF+ I C+ AL G+ AH + I F + V N LI MY KC ++E A VF+ M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+D VSWN+M+ GYA G A LF+ M ++ D +++ +IS H G
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPER----DVVSWNSLISGYLHNG 153
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 233/383 (60%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+ + +CG+ + G A++ G + VG+SLI++Y++ + DA K F+ +
Sbjct: 159 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 218
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N+VS+ AI+ +A+ + + L+ + ++ + + FTF S+LS GA+G+G
Sbjct: 219 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 278
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + ++ G+ S + N+LISMY +CGN+E A VFN M ++++SW SMI G+A+HG
Sbjct: 279 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 338
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A RA+++F +M++ KP+ IT++ V+S+C H G++ EG+ +F+SM K HG+ P ++HY+
Sbjct: 339 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 398
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C+VDLLGR+GLL EA +FI MP+ +A++W AAE L EP+
Sbjct: 399 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 458
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
A ++ L+NL+A W ++RK MK++ L GCSWIE+ N V+RF + S+ +
Sbjct: 459 DPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 518
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I LD L ++K +GY+P+
Sbjct: 519 AWQIYQELDQLASKIKEMGYIPD 541
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 138/264 (52%), Gaps = 4/264 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFEE 195
S+ +++C + G IR G +V VG SL+ +Y+KC + D+ KVFE+
Sbjct: 55 SSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQ 114
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
MP NV+SWTAII A+AQ + D +EL+ M + + PN F+F+S+L AC
Sbjct: 115 MPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 174
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G + +++G S V NSLISMY + G +E+A F+ + K++VS+N+++ GYA+
Sbjct: 175 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 234
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+ + A LF E+ + A TF ++S G + +G+ + K G K
Sbjct: 235 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 294
Query: 375 YSCVVDLLGRAGLLEEARDFIKQM 398
+ ++ + R G +E A +M
Sbjct: 295 CNALISMYSRCGNIEAAFQVFNEM 318
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
AYKVF++MP RN+V+WT +I FAQ ++L+ M S P+ FT++S+LSACT
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC---GNVEEAVYVFNNMHGKDIVSW 305
G L G+ H + IR+G + V SL+ MY KC G+V+++ VF M +++SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 306 NSMIAGYAQHGLAVR-AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
++I YAQ G + AI+LF +M+ ++P+ +F V+ +C + G+ +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEAR 392
K G+ + ++ + R+G +E+AR
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDAR 211
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 247/455 (54%), Gaps = 63/455 (13%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V L +MH + L+ DA+ +S A+++ G + G A++ G A+ V ++
Sbjct: 141 VVALATMHGE---GLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTA 197
Query: 176 LITLYSKC-------RV------------------------IIDAYKVFEEMPVR----N 200
LI +Y KC RV + +A ++F+E R N
Sbjct: 198 LIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELN 257
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
VVSWT+I+A Q + +E +R M+ EPN T +L A AL GRSAHC
Sbjct: 258 VVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHC 317
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
+R GF + V+++L+ MY KCG V++A +F+ M +++VSWN+MI GYA +G AV
Sbjct: 318 FALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVN 377
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVV 379
A+ +F M+K + KPD +TF ++++C GL EEG+ YF M ++G+ P ++HY+C+V
Sbjct: 378 AVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMV 437
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAA 422
LLGRAG L+EA D I MP P+A IW AAE LEPE A
Sbjct: 438 TLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAG 497
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
+V L+N+YA + WD+ RVR++MKD GLK GCSWIEI N V+ A D S+ ++
Sbjct: 498 NYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTA 557
Query: 483 ILPVLDFLVDQMKTLGYVP-------EVHEEKVDD 510
I+ ++ L QM+ LG+VP +V E++ DD
Sbjct: 558 IIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDD 592
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 127/311 (40%), Gaps = 42/311 (13%)
Query: 121 SMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
S+HH L D L TA SC + R +A +G + +V SSL+ Y
Sbjct: 6 SLHHFLRHVSFPPDPHLLPTAFKSCPTLPLARA---LHAVAEVSGLARDPFVASSLLHAY 62
Query: 181 SKCRVIIDAYKVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDF 237
+ +A +F+ MP R VV W+A++AA A + L M R+ +EPN
Sbjct: 63 LRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVI 122
Query: 238 TFTSILSACTGSG------------------------------ALGQ------GRSAHCQ 261
T+ ++S SG A+G G+ H
Sbjct: 123 TWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGY 182
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ G + V +LI MY KCG E V VF+ D+ S N++IAG +++ A
Sbjct: 183 AVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEA 242
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ LF+E + + V+ + +++ +++ C G E +F M G +P CV+
Sbjct: 243 LRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPA 302
Query: 382 LGRAGLLEEAR 392
L R
Sbjct: 303 FANVAALMHGR 313
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 238/440 (54%), Gaps = 57/440 (12%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN----VYVGSSLITLYSKCRVI 186
++ D +T +++C + + + G ++ N + V ++LITLY K +
Sbjct: 285 IQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKV 344
Query: 187 IDAYKVFEEMPVRNVVSWTAIIAAF-------------------------------AQEW 215
+A K+F MPVRN+++W AI++ + AQ
Sbjct: 345 DEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNG 404
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
D L+L++ MR EP DF F L+AC+ GAL GR H Q + +G+ S + V N
Sbjct: 405 FGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGN 464
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
++ISMY KCG VE A VF M D+VSWNSMIA QHG V+AI+LF++M+K+ V P
Sbjct: 465 AMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFP 524
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDF 394
D ITFL V+++C H GLVE+G+ YF+SM + +G+ P DHY+ +VDL RAG+ AR
Sbjct: 525 DRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIV 584
Query: 395 IKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCW 437
I MP P A +W EAAE L P+ T+V L+N+YA V W
Sbjct: 585 IDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRW 644
Query: 438 DQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
+ A+VRKLM+D+ ++ P CSWIE+ N V+ F +D + + + L+ L +MK L
Sbjct: 645 NDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKL 704
Query: 498 GYVPE----VHEEKVDDASH 513
GY+P+ +H+ + + H
Sbjct: 705 GYIPDTKFVLHDMEYEQKEH 724
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 64/321 (19%)
Query: 158 QCLAIRTGF-IANVYVGSSLITLYSK--------CRVIIDAYKVFEEMPVRNVVSWTAII 208
C ++TG + V ++L+++Y K C ++ A K+F+EMP R+ ++WT +I
Sbjct: 171 HCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMI 230
Query: 209 AAFAQE--------------------WQVDM-----------CLELYRMMRNSMLEPNDF 237
+ + W + L L R MR ++ +D
Sbjct: 231 TGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDI 290
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGF---FSY-IQVANSLISMYCKCGNVEEAVYV 293
T+T+I+SAC G+ G+ H ++ S+ + V+N+LI++YCK V+EA +
Sbjct: 291 TYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKI 350
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M ++I++WN++++GY G A FEEM + + +T +IS G
Sbjct: 351 FYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL----LTLTVMISGLAQNGFG 406
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM--------------- 398
+EG F M G +P ++ + G LE R Q+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466
Query: 399 -PIYPNAVIWEAAESRLLLEP 418
+Y + EAAES + P
Sbjct: 467 ISMYAKCGVVEAAESVFVTMP 487
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 52/285 (18%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
++LIT Y + ++F P+ R+ V + A+I +A LEL+R MR
Sbjct: 83 TTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD 142
Query: 232 LEPNDFTFTSILSACT-GSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCK------ 283
P+DFTFTS+LSA G Q HC ++ G V N+L+S+Y K
Sbjct: 143 FRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELG 202
Query: 284 --CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ---------- 331
C + A +F+ M +D ++W +MI GY ++ A ++FE M++
Sbjct: 203 IPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMIS 262
Query: 332 ---------------------RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
++ D IT+ +IS+C + G + GK + K+ L P
Sbjct: 263 GYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNP 322
Query: 371 ELDHYSC------VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+H C ++ L + ++EAR MP+ N + W A
Sbjct: 323 --NHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNA 364
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 36/156 (23%)
Query: 227 MRNSM---LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
MRN++ L N + L + + R+ H I GF N L+ MYCK
Sbjct: 1 MRNALDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCK 60
Query: 284 C-------------------------------GNVEEAVYVFNN--MHGKDIVSWNSMIA 310
GN+E +FN ++ +D V +N+MI
Sbjct: 61 SSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMIT 120
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
GYA +G A++LF M + +PD TF V+S+
Sbjct: 121 GYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA 156
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 233/383 (60%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+ + +CG+ + G A++ G + VG+SLI++Y++ + DA K F+ +
Sbjct: 164 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 223
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N+VS+ AI+ +A+ + + L+ + ++ + + FTF S+LS GA+G+G
Sbjct: 224 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 283
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + ++ G+ S + N+LISMY +CGN+E A VFN M ++++SW SMI G+A+HG
Sbjct: 284 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 343
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A RA+++F +M++ KP+ IT++ V+S+C H G++ EG+ +F+SM K HG+ P ++HY+
Sbjct: 344 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 403
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C+VDLLGR+GLL EA +FI MP+ +A++W AAE L EP+
Sbjct: 404 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 463
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
A ++ L+NL+A W ++RK MK++ L GCSWIE+ N V+RF + S+ +
Sbjct: 464 DPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 523
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I LD L ++K +GY+P+
Sbjct: 524 AWQIYQELDQLASKIKEMGYIPD 546
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 138/264 (52%), Gaps = 4/264 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFEE 195
S+ +++C + G IR G +V VG SL+ +Y+KC + D+ KVFE+
Sbjct: 60 SSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQ 119
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
MP NV+SWTAII A+AQ + D +EL+ M + + PN F+F+S+L AC
Sbjct: 120 MPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 179
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G + +++G S V NSLISMY + G +E+A F+ + K++VS+N+++ GYA+
Sbjct: 180 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 239
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+ + A LF E+ + A TF ++S G + +G+ + K G K
Sbjct: 240 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 299
Query: 375 YSCVVDLLGRAGLLEEARDFIKQM 398
+ ++ + R G +E A +M
Sbjct: 300 CNALISMYSRCGNIEAAFQVFNEM 323
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
AYKVF++MP RN+V+WT +I FAQ ++L+ M S P+ FT++S+LSACT
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC---GNVEEAVYVFNNMHGKDIVSW 305
G L G+ H + IR+G + V SL+ MY KC G+V+++ VF M +++SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 306 NSMIAGYAQHGLAVR-AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
++I YAQ G + AI+LF +M+ ++P+ +F V+ +C + G+ +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEAR 392
K G+ + ++ + R+G +E+AR
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDAR 216
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 226/384 (58%), Gaps = 18/384 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+ LK D+ +++ +C +R G I+TG + NV+VGSSLI LYSKC +
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A KVF M N+V+W ++I+ +++ ++ ++L+ +M + + P+ + TS+L A +
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISS 589
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ +L +G+S H T+R+G S + N+LI MY KCG + A +F M K +++WN M
Sbjct: 590 TASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLM 649
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HG 367
I GY HG + A+ LF+EM K PD +TFL +IS+C H G VEEGK F+ M + +G
Sbjct: 650 IYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYG 709
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAA 410
++P ++HY+ +VDLLGRAGLLEEA FIK MPI ++ IW +A
Sbjct: 710 IEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSA 769
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
E L +EPE +T+VQL NLY ++AA++ LMK+KGL PGCSWIE+ + F
Sbjct: 770 EKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVF 829
Query: 471 RAEDKSNTRLSEILPVLDFLVDQM 494
+ S+ +EI VL+ L M
Sbjct: 830 FSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 3/271 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIR--GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
++ DA LS V+ N R G +R + ++ ++LI +Y K + ID
Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSID 223
Query: 189 AYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A++VF E+ + NVV W +I F + L+LY + +N+ ++ +FT L AC+
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
S G GR HC ++MG + V SL+SMY KCG V EA VF+ + K + WN+
Sbjct: 284 QSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA 343
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M+A YA++ A+DLF M ++ V PD+ T VIS C GL GK + K
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++ S ++ L + G +A K M
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSM 434
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 143/281 (50%), Gaps = 3/281 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+K+ ++ + A+ +C + N G C ++ G + YV +SL+++YSKC ++ +A
Sbjct: 268 VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAE 327
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VF + + + W A++AA+A+ L+L+ MR + P+ FT ++++S C+ G
Sbjct: 328 TVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLG 387
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G+S H + + S + ++L+++Y KCG +A VF +M KD+V+W S+I+
Sbjct: 388 LYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLIS 447
Query: 311 GYAQHGLAVRAIDLFEEMM--KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
G ++G A+ +F +M +KPD+ V ++C + G SM K GL
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S ++DL + GL E A M N V W +
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMST-ENMVAWNS 547
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN- 295
FTF S+L AC+ L G++ H + +G+ +A SL++MY KCG ++ AV VF+
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 296 ------NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS-SCR 348
+ +D+ WNSMI GY + + F M+ V+PDA + V+S C+
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 349 HGGL-VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G EEGK M ++ L + + ++D+ + GL +A ++ N V+W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 128/288 (44%), Gaps = 20/288 (6%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE------- 194
+ +C + N+ G + G+ + ++ +SL+ +Y KC + A +VF+
Sbjct: 67 LKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS 126
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL-- 252
+ R+V W ++I + + + + +R M + P+ F+ + ++S G
Sbjct: 127 GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRR 186
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAG 311
+G+ H +R + + +LI MY K G +A VF + K ++V WN MI G
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+ G+ ++DL+ VK + +F G + +C G+ + K GL
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN- 305
Query: 372 LDHYSC--VVDLLGRAGLLEEARDFI-----KQMPIYPNAVIWEAAES 412
D Y C ++ + + G++ EA K++ I+ NA++ AE+
Sbjct: 306 -DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW-NAMVAAYAEN 351
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 154/394 (39%), Positives = 230/394 (58%), Gaps = 19/394 (4%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG-FIANVYVGSSLITLYSKC 183
++ ++VD + + + + R++ G + +G I +VYVGS+L+ +YSKC
Sbjct: 194 EMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKC 253
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
DA KVF EMP RN+VSW A+IA + Q + L++++ M +EPN T TS L
Sbjct: 254 GYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSAL 313
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
+AC G+L QGR H R ++ +L+ MY KCG V+EA+ VF + KD+
Sbjct: 314 TACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVY 373
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
W +MI G A G A+ +++LF +M++ RV+P+ +TFLGV+S+C HGGLV+EG F M
Sbjct: 374 PWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLM 433
Query: 364 -AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL------- 415
+ L+P +DHY C+VDLLGRAG LEEA FI+ MP+ P +W A S +
Sbjct: 434 ICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFEL 493
Query: 416 ----------LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
L+P + ++ LANLY+ + W+ AA VR+LMK KG+ +PGCSWIE+
Sbjct: 494 GEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIEVNG 553
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
V++ F A DKS+T + +L+ + Q+K Y
Sbjct: 554 VIHEFIAFDKSHTESINVYMMLESVSAQLKLATY 587
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 143/261 (54%), Gaps = 12/261 (4%)
Query: 151 IRGGAPYQCLA--IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+R P+Q A ++ G + +V +SL++ ++ C + + ++F E ++VVSWTA+I
Sbjct: 117 LRNENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALI 176
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ + LE + MR+S +E ++ T S+L A + GR H + G
Sbjct: 177 NGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRV 236
Query: 269 SY-IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ + V ++L+ MY KCG ++AV VFN M +++VSW ++IAGY Q A+ +F+E
Sbjct: 237 IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQE 296
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKV---YFDSMAKHGLKPELDHYSCVVDLLGR 384
M+ + ++P+ T +++C G +++G+ Y D +K GL +L + +VD+ +
Sbjct: 297 MIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDR-SKLGLNSKLG--TALVDMYSK 353
Query: 385 AGLLEEARDFIKQMP---IYP 402
G ++EA +++P +YP
Sbjct: 354 CGCVDEALLVFEKLPAKDVYP 374
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F+ + + W II F+ Q M L Y +RN + P+ TF +L A +
Sbjct: 60 LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 252 LGQGR-SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ AH + F +++Q NSL+S + CG V+ + +F KD+VSW ++I
Sbjct: 120 ENPFQFYAHIVKFGLDFDAFVQ--NSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALIN 177
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR-----------HGGLVEEGKVY 359
G ++G AV A++ F EM V+ D +T + V+ + HG VE G+V
Sbjct: 178 GCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVI 237
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+D S +VD+ + G ++A +MP N V W A
Sbjct: 238 WDVYVG----------SALVDMYSKCGYCDDAVKVFNEMPT-RNLVSWGA 276
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 240/400 (60%), Gaps = 19/400 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+ + +CG+ + G A++ G + VG+SLI++Y++ + DA K F+ +
Sbjct: 339 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 398
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N+VS+ AI+ +A+ + + L+ + ++ + + FTF S+LS GA+G+G
Sbjct: 399 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 458
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + ++ G+ S + N+LISMY +CGN+E A VFN M ++++SW SMI G+A+HG
Sbjct: 459 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 518
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A RA+++F +M++ KP+ IT++ V+S+C H G++ EG+ +F+SM K HG+ P ++HY+
Sbjct: 519 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 578
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C+VDLLGR+GLL EA +FI MP+ +A++W AAE L EP+
Sbjct: 579 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 638
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
A ++ L+NL+A W ++RK MK++ L GCSWIE+ N V+RF + S+ +
Sbjct: 639 DPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 698
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEPF 519
+I LD L ++K +GY+P+ + + D ++ E F
Sbjct: 699 AWQIYQELDQLASKIKEMGYIPDT-DFVLHDIEEEQKEQF 737
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 137/264 (51%), Gaps = 4/264 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFEE 195
S+ +++C + G IR G +V VG SL+ +Y+KC + D+ KVFE+
Sbjct: 235 SSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQ 294
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
MP NV+SWTAII A+ Q + D +EL+ M + + PN F+F+S+L AC
Sbjct: 295 MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 354
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G + +++G S V NSLISMY + G +E+A F+ + K++VS+N+++ GYA+
Sbjct: 355 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 414
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+ + A LF E+ + A TF ++S G + +G+ + K G K
Sbjct: 415 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 474
Query: 375 YSCVVDLLGRAGLLEEARDFIKQM 398
+ ++ + R G +E A +M
Sbjct: 475 CNALISMYSRCGNIEAAFQVFNEM 498
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 158/307 (51%), Gaps = 17/307 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVII-DAYKVFEE 195
+ + +C + G ++TG++ A+V VG LI ++ K + AYKVF++
Sbjct: 131 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 190
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP RN+V+WT +I FAQ ++L+ M S P+ FT++S+LSACT G L G
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 250
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKC---GNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+ H + IR+G + V SL+ MY KC G+V+++ VF M +++SW ++I Y
Sbjct: 251 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 310
Query: 313 AQHGLAVR-AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Q G + AI+LF +M+ ++P+ +F V+ +C + G+ + K G+
Sbjct: 311 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 370
Query: 372 LDHYSCVVDLLGRAGLLEEARD-----FIKQMPIYPNAVIWEAA-----ESRLLLEPECA 421
+ ++ + R+G +E+AR F K + Y NA++ A E LL E A
Sbjct: 371 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSY-NAIVDGYAKNLKSEEAFLLFNEIA 429
Query: 422 ATHVQLA 428
T + ++
Sbjct: 430 DTGIGIS 436
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 151/303 (49%), Gaps = 13/303 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + S + SC RN + G +++G + V ++LI+LYSKC A +F
Sbjct: 25 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 84
Query: 194 EEMP-VRNVVSWTAIIAAFAQ---EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
E M R++VSW+A+++ FA EWQ + + M PN++ F +++ AC+ +
Sbjct: 85 EGMGNKRDLVSWSAMVSCFANNSMEWQA---IWTFLDMLELGFYPNEYCFAAVIRACSNA 141
Query: 250 GALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCK-CGNVEEAVYVFNNMHGKDIVSWNS 307
G + ++ G+ + + V LI M+ K G++ A VF+ M +++V+W
Sbjct: 142 NYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTL 201
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI +AQ G A AIDLF +M PD T+ V+S+C GL+ GK + + G
Sbjct: 202 MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG 261
Query: 368 LKPELDHYSCVVDLLGRA---GLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATH 424
L ++ +VD+ + G ++++R +QMP + N + W A + + EC
Sbjct: 262 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH-NVMSWTAIITAYVQSGECDKEA 320
Query: 425 VQL 427
++L
Sbjct: 321 IEL 323
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
+M P+ T++ +L +C G+ H + ++ G V N+LIS+Y KCG
Sbjct: 16 LMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCG 75
Query: 286 NVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
+ E A +F M K D+VSW++M++ +A + + +AI F +M++ P+ F VI
Sbjct: 76 DTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVI 135
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV----VDLLGR-AGLLEEARDFIKQMP 399
+C + G++ + + K G L+ CV +D+ + +G L A +MP
Sbjct: 136 RACSNANYAWVGEIIYGFVVKTGY---LEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP 192
Query: 400 IYPNAVIWEAAESRL 414
N V W +R
Sbjct: 193 -ERNLVTWTLMITRF 206
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 236/404 (58%), Gaps = 18/404 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK +S+ + + ++ D + + +C + + G I++ + +VG +L
Sbjct: 396 EKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIAL 455
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKC ++ A K+ + + + VVSW AII+ F+ + Q + + + M ++P++
Sbjct: 456 IDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 515
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ +IL C + G+ H Q I+ S ++++L+ MY KCGN+++ +F
Sbjct: 516 FTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK 575
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+D V+WN+M+ GYAQHGL A+ +FE M + VKP+ TFL V+ +C H GLVE+G
Sbjct: 576 APNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKG 635
Query: 357 KVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
YF SM + +GL P+L+HYSCVVD++GR+G + +A + I+ MP +AVIW
Sbjct: 636 LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCK 695
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
+AA S L LEPE +A +V L+N+YA W++ ++RK+M+ GLK PGC
Sbjct: 696 IHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGC 755
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SWIEI + V+ F DK++ R EI LD L D+MK +GY+P+
Sbjct: 756 SWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD 799
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 167/317 (52%), Gaps = 8/317 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M L + L +D LS A +C + G L++++ +N+ V ++++ +
Sbjct: 298 LGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDM 357
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC +++A VFEEM R+ VSW AIIAA Q + L L+ M S +EP++FT+
Sbjct: 358 YGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTY 417
Query: 240 TSILSACTGSGALGQGRSAHCQTI--RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
S+L AC G AL G H + I RMG S++ +A LI MY KCG +E+A + + +
Sbjct: 418 GSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIA--LIDMYSKCGMMEKAEKLHDRL 475
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+ +VSWN++I+G++ + A F +M++ V PD T+ ++ +C + VE GK
Sbjct: 476 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 535
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAAESR 413
+ K L+ + S +VD+ + G +++ + ++ P + NA++ A+
Sbjct: 536 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 595
Query: 414 LLLEPECAATHVQLANL 430
L E ++QL N+
Sbjct: 596 LGEEALKIFEYMQLENV 612
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 133/253 (52%), Gaps = 9/253 (3%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIID-AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
A++T F +V +G++ + +Y KC + D + ++F +P N+ S+ AII +A+ +
Sbjct: 237 ALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIE 296
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L ++R+++ S L ++ + + AC +G H +++ S I VAN+++
Sbjct: 297 ALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILD 356
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY KCG + EA VF M +D VSWN++IA + Q+G + + LF M++ ++PD T
Sbjct: 357 MYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFT 416
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV--VDLLGRAGLLEEARD---- 393
+ V+ +C + G + + K + LD + + +D+ + G++E+A
Sbjct: 417 YGSVLKACAGWQALNCGMEIHNRIIKS--RMGLDSFVGIALIDMYSKCGMMEKAEKLHDR 474
Query: 394 FIKQMPIYPNAVI 406
+Q + NA+I
Sbjct: 475 LAEQTVVSWNAII 487
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 137/340 (40%), Gaps = 82/340 (24%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C + + G I T F V+V + LI +Y KC + A+KVF+ MP R+ VSW
Sbjct: 52 CSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSW 111
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNS---MLEPNDF------------TFTSILSACTGS 249
A++ +A + + +L+ M + ++E DF TF +L +C+
Sbjct: 112 NAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSL 171
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC----GNVEEAVYVFNNMH------- 298
G G H ++MGF + ++L+ MY KC ++ + +F M
Sbjct: 172 EDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGAL 231
Query: 299 -----------GKDIV--------------------------------SWNSMIAGYAQH 315
G D+V S+N++I GYA+
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARS 291
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL------K 369
+ A+ +F + K + D ++ G +C V +G + + + HGL +
Sbjct: 292 DKGIEALGMFRLLQKSGLGLDEVSLSGAXRACA----VIKGDL--EGLQVHGLSMKSLCQ 345
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + ++D+ G+ G L EA ++M + +AV W A
Sbjct: 346 SNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNA 384
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF+ I C+ AL G+ AH + I F + V N LI MY KC ++ A VF+ M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFE---------------EMMKQRVKPDAITFLG 342
+D VSWN+M+ GYA G A LF+ M + D TF
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 343 VISSCR----HGGLVE 354
V+ SC HGG ++
Sbjct: 164 VLKSCSSLEDHGGGIQ 179
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 240/400 (60%), Gaps = 19/400 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+ + +CG+ + G A++ G + VG+SLI++Y++ + DA K F+ +
Sbjct: 357 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 416
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N+VS+ AI+ +A+ + + L+ + ++ + + FTF S+LS GA+G+G
Sbjct: 417 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 476
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + ++ G+ S + N+LISMY +CGN+E A VFN M ++++SW SMI G+A+HG
Sbjct: 477 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 536
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A RA+++F +M++ KP+ IT++ V+S+C H G++ EG+ +F+SM K HG+ P ++HY+
Sbjct: 537 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 596
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C+VDLLGR+GLL EA +FI MP+ +A++W AAE L EP+
Sbjct: 597 CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPD 656
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
A ++ L+NL+A W ++RK MK++ L GCSWIE+ N V+RF + S+ +
Sbjct: 657 DPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 716
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEPF 519
+I LD L ++K +GY+P+ + + D ++ E F
Sbjct: 717 AWQIYQELDQLASKIKEMGYIPDT-DFVLHDIEEEQKEQF 755
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 137/264 (51%), Gaps = 4/264 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFEE 195
S+ +++C + G IR G +V VG SL+ +Y+KC + D+ KVFE+
Sbjct: 253 SSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQ 312
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
MP NV+SWTAII A+ Q + D +EL+ M + + PN F+F+S+L AC
Sbjct: 313 MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 372
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G + +++G S V NSLISMY + G +E+A F+ + K++VS+N+++ GYA+
Sbjct: 373 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 432
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+ + A LF E+ + A TF ++S G + +G+ + K G K
Sbjct: 433 NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI 492
Query: 375 YSCVVDLLGRAGLLEEARDFIKQM 398
+ ++ + R G +E A +M
Sbjct: 493 CNALISMYSRCGNIEAAFQVFNEM 516
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 158/307 (51%), Gaps = 17/307 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVII-DAYKVFEE 195
+ + +C + G ++TG++ A+V VG LI ++ K + AYKVF++
Sbjct: 149 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 208
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP RN+V+WT +I FAQ ++L+ M S P+ FT++S+LSACT G L G
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 268
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKC---GNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+ H + IR+G + V SL+ MY KC G+V+++ VF M +++SW ++I Y
Sbjct: 269 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 328
Query: 313 AQHGLAVR-AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Q G + AI+LF +M+ ++P+ +F V+ +C + G+ + K G+
Sbjct: 329 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 388
Query: 372 LDHYSCVVDLLGRAGLLEEARD-----FIKQMPIYPNAVIWEAA-----ESRLLLEPECA 421
+ ++ + R+G +E+AR F K + Y NA++ A E LL E A
Sbjct: 389 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSY-NAIVDGYAKNLKSEEAFLLFNEIA 447
Query: 422 ATHVQLA 428
T + ++
Sbjct: 448 DTGIGIS 454
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 151/303 (49%), Gaps = 13/303 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + S + SC RN + G +++G + V ++LI+LYSKC A +F
Sbjct: 43 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 102
Query: 194 EEMP-VRNVVSWTAIIAAFAQ---EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
E M R++VSW+A+++ FA EWQ + + M PN++ F +++ AC+ +
Sbjct: 103 EGMGNKRDLVSWSAMVSCFANNSMEWQA---IWTFLDMLELGFYPNEYCFAAVIRACSNA 159
Query: 250 GALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCK-CGNVEEAVYVFNNMHGKDIVSWNS 307
G + ++ G+ + + V LI M+ K G++ A VF+ M +++V+W
Sbjct: 160 NYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTL 219
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI +AQ G A AIDLF +M PD T+ V+S+C GL+ GK + + G
Sbjct: 220 MITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG 279
Query: 368 LKPELDHYSCVVDLLGRA---GLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATH 424
L ++ +VD+ + G ++++R +QMP + N + W A + + EC
Sbjct: 280 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH-NVMSWTAIITAYVQSGECDKEA 338
Query: 425 VQL 427
++L
Sbjct: 339 IEL 341
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
+M P+ T++ +L +C G+ H + ++ G V N+LIS+Y KCG
Sbjct: 34 LMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCG 93
Query: 286 NVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
+ E A +F M K D+VSW++M++ +A + + +AI F +M++ P+ F VI
Sbjct: 94 DTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVI 153
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV----VDLLGR-AGLLEEARDFIKQMP 399
+C + G++ + + K G L+ CV +D+ + +G L A +MP
Sbjct: 154 RACSNANYAWVGEIIYGFVVKTGY---LEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP 210
Query: 400 IYPNAVIWEAAESRL 414
N V W +R
Sbjct: 211 -ERNLVTWTLMITRF 224
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 242/430 (56%), Gaps = 31/430 (7%)
Query: 104 VFDQLLDTPVVDVEKLI-------------SMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD+++ V+ +I +++ ++ + ++ + ++ + +C S
Sbjct: 385 VFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAA 444
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G + G + +VG++L+ +YS C + DA +VF+ M R++V++ A+I
Sbjct: 445 LEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGG 504
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+A L+L+ ++ L+P+ T+ ++L+AC SG+L R H + GFFS
Sbjct: 505 YAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSD 564
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V N+L+S Y KCG+ +A VF M ++++SWN++I G AQHG A+ LFE M
Sbjct: 565 TSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKM 624
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLE 389
+ VKPD +TF+ ++S+C H GL+EEG+ YF SM++ + P ++HY C+VDLLGRAG L+
Sbjct: 625 EGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLD 684
Query: 390 EARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYA 432
EA IK MP N IW AAES L L+ + A +V L+++YA
Sbjct: 685 EAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYA 744
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
WD AA++RKLM+ +G+ PG SWI++ + ++ F AED+S+ + +I LD L
Sbjct: 745 AAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTH 804
Query: 493 QMKTLGYVPE 502
MK GYVP+
Sbjct: 805 AMKMKGYVPD 814
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 162/293 (55%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ +++ + RE + + + +C ++ + G + GF +++ V ++L
Sbjct: 310 EEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNAL 369
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I++YS+C I DA VF++M ++V+SWTA+I A+ L +Y+ M+ + +EPN
Sbjct: 370 ISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNR 429
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T+TSIL+AC+ AL GR H Q + G + V N+L++MY CG+V++A VF+
Sbjct: 430 VTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDR 489
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +DIV++N+MI GYA H L A+ LF+ + ++ +KPD +T++ ++++C + G +E
Sbjct: 490 MIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWA 549
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + K G + + +V + G +A ++M N + W A
Sbjct: 550 REIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNA 601
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 138/248 (55%)
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
++ G + G ++ VG++L+ +Y+KC D +VFE++ R++++W +I
Sbjct: 243 LKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG 302
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
A+ + E+Y M+ + PN T+ +L+AC S AL G+ H + + GF S
Sbjct: 303 LAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSD 362
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
I V N+LISMY +CG++++A VF+ M KD++SW +MI G A+ G A+ +++EM +
Sbjct: 363 IGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQ 422
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
V+P+ +T+ ++++C +E G+ + + GL + + +V++ G +++
Sbjct: 423 AGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKD 482
Query: 391 ARDFIKQM 398
AR +M
Sbjct: 483 ARQVFDRM 490
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 159/294 (54%), Gaps = 1/294 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+EK + + + + L D + + + ++SC S + G A++ G + +V V +
Sbjct: 107 IEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANC 166
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++ +Y+KC I +A +VF++M ++VVSWT I +A + + E+++ M + PN
Sbjct: 167 ILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPN 226
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T+ S+L+A + AL G++ H + + G S V +L+ MY KCG+ ++ VF
Sbjct: 227 RITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFE 286
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ +D+++WN+MI G A+ G A +++ +M ++ V P+ IT++ ++++C + +
Sbjct: 287 KLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHW 346
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GK +AK G ++ + ++ + R G +++AR +M + + + W A
Sbjct: 347 GKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKM-VRKDVISWTA 399
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 164/332 (49%), Gaps = 20/332 (6%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L ++ +V++S + C +++ G I+ + + Y ++LI +Y +C
Sbjct: 14 LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73
Query: 186 IIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
I +A +V++++ R V SW A++ + Q ++ L+L R M+ L P+ T S L
Sbjct: 74 IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFL 133
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
S+C GAL GR H Q ++ G ++VAN +++MY KCG++EEA VF+ M K +V
Sbjct: 134 SSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVV 193
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SW I GYA G + A ++F++M ++ V P+ IT++ V+++ ++ GK +
Sbjct: 194 SWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRI 253
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAAT 423
G + + + +V + + G ++ R ++ L+ + A
Sbjct: 254 LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEK-----------------LVNRDLIAW 296
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ + L G W++A+ V M+ +G+ N
Sbjct: 297 NTMIGGLAEG-GYWEEASEVYNQMQREGVMPN 327
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 17/265 (6%)
Query: 67 VHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH--H 124
+H ++++ L TD+ H+ + N ++ S + VFD+++ +V +I + H
Sbjct: 451 IHQQVVEAGLATDA-HVGNTLVNM-YSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAH 508
Query: 125 DLHRERLKV-----------DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
+L +E LK+ D + +C ++ ++ L + GF ++ VG
Sbjct: 509 NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVG 568
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++L++ Y+KC DA VFE+M RNV+SW AII AQ + L+L+ M+ ++
Sbjct: 569 NALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVK 628
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVY 292
P+ TF S+LSAC+ +G L +GR C + I+ ++ + + G ++EA
Sbjct: 629 PDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEA 688
Query: 293 VFNNM-HGKDIVSWNSMIAGYAQHG 316
+ M + W +++ HG
Sbjct: 689 LIKTMPFQANTRIWGALLGACRIHG 713
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 246/469 (52%), Gaps = 63/469 (13%)
Query: 96 NSTFGSSNVFDQLLDTPVV--------------DVEKLISMHHDLHRERLKVDASFLSTA 141
NS+F + + QLLD V IS+ + L + D S
Sbjct: 60 NSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFV 119
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC------RVIID------- 188
+ +C ++R G + G +N+++ + ++ LY+ C R + D
Sbjct: 120 LKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDV 179
Query: 189 ------------------AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
AYK+F EMP RNV SWT++I +AQ + ++L+ M ++
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
L PN+ T ++L AC G L GR H + R G+ I+V N+LI MY KCG +E+A
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDA 299
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F+NM + +VSW++MIAG A HG A A+ LF +M+ VKP+A+TF+G++ +C H
Sbjct: 300 CRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHM 359
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-- 407
G+VE+G+ YF SM + +G+ P ++HY C+VDL RAGLL+EA +FI MPI PN V+W
Sbjct: 360 GMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGA 419
Query: 408 ---------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
EA L+P +V L+N+YA W+ ARVRKLM+D+G+
Sbjct: 420 LLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGV 479
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
K PG S I + VVY F A D ++ + EI + L+ +MK GYVP
Sbjct: 480 KKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVP 528
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 147/354 (41%), Gaps = 59/354 (16%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F+ + V W + +FA+ + L+ +R + P+ +T + +L AC+
Sbjct: 69 IFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD 128
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN----- 306
+ G+ H ++G S + + N ++ +Y CG + A VF+ M +D+++WN
Sbjct: 129 VRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188
Query: 307 --------------------------SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
SMI GYAQ G + AIDLF EM + P+ +T
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ V+ +C G + G+ D + G + + + ++D+ + G LE+A M
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNME- 307
Query: 401 YPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
V W A +A L A R D A K++ + G+K N ++
Sbjct: 308 ERTVVSWSA----------------MIAGLAAHGRAEDALALFNKMI-NTGVKPN-AVTF 349
Query: 461 IEI------MNVVYRFRAEDKSNTRLSEILPVLDF---LVDQMKTLGYVPEVHE 505
I I M +V + R S TR I+P ++ +VD G + E HE
Sbjct: 350 IGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHE 403
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 283/521 (54%), Gaps = 31/521 (5%)
Query: 4 IFLQTCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDST 63
+ L T KP + + YR C+ L + S+SL + L++ I +
Sbjct: 1 MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLL-SFTRSRSLRQGLQLHAHILKFGLQTI 59
Query: 64 KTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSS-NVFDQLLDTPVVDVEKLISM 122
H LI + +T Q F+ +++T+ S + F Q + P++ ++ M
Sbjct: 60 PLVSH-NLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQN-EAPLLALQFFRRM 117
Query: 123 HHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
+D ++ D +A +CG R G CLA++TG+ +V+VGSSL+ +Y+K
Sbjct: 118 LND----GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAK 173
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP---NDFTF 239
C I DA +F+EMP RNVVSW+ +I +A Q+D +E + + +++E NDFTF
Sbjct: 174 CGEIGDARHLFDEMPERNVVSWSGMIYGYA---QLDDGVEALTLFKQALIEDVDVNDFTF 230
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S++ C+ S L G+ H ++M F S V ++LIS+Y KCG +E A VF+ +
Sbjct: 231 SSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPT 290
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+++ WNSM+ AQH R LFEEM +KP+ I+FL V+ +C H GLVE+G+ Y
Sbjct: 291 RNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREY 350
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------- 409
F M +G++PE +HY+ +VDLLGRAG L+EA IKQMP+ P +W A
Sbjct: 351 FSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKD 410
Query: 410 -------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIE 462
A+ L ++ + HV L+N YA +++AAR+RK+++D+G+K G SW+E
Sbjct: 411 TEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVE 470
Query: 463 IMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
N V+ F A D+S+ + EI L+ L ++M+ GYV +
Sbjct: 471 EGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADT 511
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 251/450 (55%), Gaps = 31/450 (6%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDV----------EKLISMHHDLHRERLKVDASFLSTA 141
+ +N + VFD + + V+ EKL H R+++ L T
Sbjct: 376 YAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTF 435
Query: 142 VTSCGSTRNIRG---GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
V+ G + ++ L I+ G +++ GS+LI +YSKC + DA VFEEM
Sbjct: 436 VSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE 495
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+++V W A+ + Q + + L+LY ++ S +PN+FTF ++++A + +L G+
Sbjct: 496 KDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQF 555
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H Q ++MG V N+L+ MY KCG++EEA +FN+ +D+V WNSMI+ +AQHG A
Sbjct: 556 HNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEA 615
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A+ +F EMMK+ ++P+ +TF+ V+S+C H G VE+G +F+SM G+KP +HY+CV
Sbjct: 616 EEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACV 675
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECA 421
V LLGR+G L EA++FI++MPI P A++W AAE + +P+ +
Sbjct: 676 VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDS 735
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
+++ L+N++A W +VR M + PG SWIE+ N V F A D ++ R +
Sbjct: 736 GSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTH-REA 794
Query: 482 EILPVLDFLVDQMKTLGYVPEVHEEKVDDA 511
+I VLD L+ +K GYVP+ ++D
Sbjct: 795 DIGSVLDILIQHIKGAGYVPDATALLMNDG 824
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 162/331 (48%), Gaps = 14/331 (4%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFL 138
+T N +FDQ++ ++ +IS + +++R K D
Sbjct: 275 YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFAC 334
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ +TSCGS + G I+ ++ +V + LI +Y+K ++IDA KVF+ M
Sbjct: 335 TSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAE 394
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+NV+S+ A+I ++ + ++ LEL+ MR + P+ TF S+L AL +
Sbjct: 395 QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQI 454
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H I+ G + ++LI +Y KC V++A +VF M+ KDIV WN+M GY QH
Sbjct: 455 HGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLEN 514
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A+ L+ + R KP+ TF +I++ + + G+ + + + K GL + +
Sbjct: 515 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 574
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
VD+ + G +EEAR I+ + V W +
Sbjct: 575 VDMYAKCGSIEEARKMFNS-SIWRDVVCWNS 604
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 155/309 (50%), Gaps = 14/309 (4%)
Query: 104 VFDQLLDTPVVDVEKLISMHH-------------DLHRERLKVDASF-LSTAVTSCGSTR 149
VFD++ ++ ++SM+ DL R+ + F L++ + +C
Sbjct: 84 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 143
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+ GA +R+GF +VYVG+SLI YSK I +A VF+++ + V+WT IIA
Sbjct: 144 VVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIA 203
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ + + + LEL+ MR + + P+ + +S+LSAC+ L G+ H +R G
Sbjct: 204 GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM 263
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ V N LI Y KC V+ +F+ M K+I+SW +MI+GY Q+ A+ LF EM
Sbjct: 264 DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMN 323
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
+ KPD V++SC +E+G+ K L+ + + ++D+ ++ LL
Sbjct: 324 RLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLI 383
Query: 390 EARDFIKQM 398
+A+ M
Sbjct: 384 DAKKVFDVM 392
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 161/336 (47%), Gaps = 21/336 (6%)
Query: 91 DFTGTNSTFGSSN-VFDQLLDTPVVDVEKLISMHHDLHRERLKV-------------DAS 136
DF N + VFDQL + V +I+ + R + + D
Sbjct: 172 DFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRY 231
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+S+ +++C + GG +R G +V V + LI Y+KC + K+F++M
Sbjct: 232 VVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM 291
Query: 197 PVRNVVSWTAIIAAFAQ---EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
V+N++SWT +I+ + Q +W+ ++L+ M +P+ F TS+L++C AL
Sbjct: 292 VVKNIISWTTMISGYMQNSFDWE---AMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 348
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
QGR H TI+ S V N LI MY K + +A VF+ M ++++S+N+MI GY+
Sbjct: 349 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 408
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
A++LF EM + P +TF+ ++ +E K + K G+ +L
Sbjct: 409 SQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLF 468
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S ++D+ + +++AR ++M + V+W A
Sbjct: 469 AGSALIDVYSKCSYVKDARHVFEEMN-EKDIVVWNA 503
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 133/247 (53%), Gaps = 2/247 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I +G ++ ++ + LI + SK + +A VF++MP +N+++W+++++ ++Q+ + L
Sbjct: 54 IVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEAL 113
Query: 222 ELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++ + R S PN+F S++ ACT G + +G H +R GF + V SLI
Sbjct: 114 MVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDF 173
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K GN+EEA VF+ + K V+W ++IAGY + G + +++LF +M + V PD
Sbjct: 174 YSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVV 233
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
V+S+C +E GK + + G + ++ + ++D + ++ R QM +
Sbjct: 234 SSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM-V 292
Query: 401 YPNAVIW 407
N + W
Sbjct: 293 VKNIISW 299
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
L P F ++L + + H Q I G S +AN LI++ K V+ A
Sbjct: 23 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 82
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK-PDAITFLGVISSCRHG 350
VF+ M K++++W+SM++ Y+Q G + A+ +F ++ ++ + P+ VI +C
Sbjct: 83 VVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQL 142
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G+VE+G + + G ++ + ++D + G +EEAR Q+ AV W
Sbjct: 143 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS-EKTAVTW 198
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 162/465 (34%), Positives = 253/465 (54%), Gaps = 32/465 (6%)
Query: 67 VHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHH-- 124
+H L + L D L+S H + + + +VFD + VV LI+ +
Sbjct: 84 IHSHLSRSRLAGDGFLLNS--LIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQN 141
Query: 125 -----------DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
D+ R R + ++ + + G+ G LA++ +VYVG
Sbjct: 142 DMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVG 201
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
S+L+ +Y++C+ + A +VF+ + +N VSW A+IA FA++ + L + M+ +
Sbjct: 202 SALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFG 261
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
FT++S+ SA GAL QGR H I+ G VAN+++ MY K G++ +A V
Sbjct: 262 ATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKV 321
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ + +D+V+WN+M+ +AQ+GL A+ FEE+ K ++ + ITFL V+++C HGGLV
Sbjct: 322 FDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLV 381
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
+EGK YFD M + ++PE+DHY VDLLGRAGLL+EA F+ +MP+ P A +W
Sbjct: 382 KEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 441
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AA+ L+PE V L N+YA WD AARVRK+MK G+K P
Sbjct: 442 CRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEP 501
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
CSW+EI N V+ F A+D ++ + EI + + + ++K GYVP
Sbjct: 502 ACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVP 546
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 125/251 (49%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+T+C ++N+ G R+ + ++ +SLI +Y KC + DA VF+ +P R+V
Sbjct: 69 ITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDV 128
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWT +I +AQ L L M + P+ FTFTS L A G G G H
Sbjct: 129 VSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHAL 188
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ + V ++L+ MY +C ++ A+ VF+ + K+ VSWN++IAG+A+ G
Sbjct: 189 AVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETT 248
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ F EM + T+ V S+ G +E+G+ M K G K + ++ +
Sbjct: 249 LMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGM 308
Query: 382 LGRAGLLEEAR 392
++G + +AR
Sbjct: 309 YAKSGSMVDAR 319
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
L P + SI++AC S L R+ H R + NSLI MYCKCG V +A
Sbjct: 58 LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDAR 117
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+VF+ + +D+VSW +I GYAQ+ + A+ L +M++ R +P TF + + G
Sbjct: 118 HVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG 177
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
G+ K+ L ++ S ++D+ R
Sbjct: 178 GRGIGEQMHALAVKYNLDEDVYVGSALLDMYAR 210
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 225/384 (58%), Gaps = 19/384 (4%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+F+S + SC S ++ G ++ N +VG++L+ +Y+K R + DA +F
Sbjct: 293 TFISI-LRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNR 351
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ R++ +WT I+A +AQ+ Q + ++ + M+ ++PN+FT S LS C+ L G
Sbjct: 352 LIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 411
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H I+ G + VA++L+ MY KCG VE+A VF+ + +D VSWN++I GY+QH
Sbjct: 412 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 471
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDH 374
G +A+ FE M+ + PD +TF+GV+S+C H GL+EEGK +F+S++K +G+ P ++H
Sbjct: 472 GQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH 531
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLE 417
Y+C+VD+LGRAG E FI++M + N +IWE AA LE
Sbjct: 532 YACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELE 591
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
PE + ++ L+N++A WD VR LM +G+K PGCSW+E+ V+ F + D S+
Sbjct: 592 PEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSH 651
Query: 478 TRLSEILPVLDFLVDQMKTLGYVP 501
++ EI L L ++ ++GY P
Sbjct: 652 PKIREIHLKLQDLHQKLMSVGYTP 675
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 131/257 (50%), Gaps = 2/257 (0%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+F+S + +C S ++ G I++G + ++ +SL+ +Y+KC A KVF E
Sbjct: 193 TFISI-LKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGE 251
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+P R+VVSWTA+I F E L ++ M PN +TF SIL +C+ + G
Sbjct: 252 IPERDVVSWTALITGFVAE-GYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H Q ++ V +L+ MY K +E+A +FN + +D+ +W ++AGYAQ
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 370
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G +A+ F +M ++ VKP+ T +S C ++ G+ K G ++
Sbjct: 371 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 430
Query: 376 SCVVDLLGRAGLLEEAR 392
S +VD+ + G +E+A
Sbjct: 431 SALVDMYAKCGCVEDAE 447
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 147/315 (46%), Gaps = 16/315 (5%)
Query: 84 DSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVT 143
D Q++N + NS + +++ + + + + R++++ ++ ++
Sbjct: 54 DVQQWNQKLSSANSPY---------------PLQEAVQLFYLMRHTRIRLNQFIFASLIS 98
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+ S + G + GF +++ + ++ +T+Y K + + + ++ F+ M + N+ S
Sbjct: 99 AAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLAS 158
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
+++ F D + + EPN +TF SIL C G L +G++ H Q I
Sbjct: 159 RNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVI 218
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ G + NSL+++Y KCG+ A VF + +D+VSW ++I G+ G +
Sbjct: 219 KSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLR 277
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F +M+ + P+ TF+ ++ SC V+ GK + K+ L + +VD+
Sbjct: 278 IFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYA 337
Query: 384 RAGLLEEARDFIKQM 398
+ LE+A ++
Sbjct: 338 KNRFLEDAETIFNRL 352
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 127/248 (51%), Gaps = 1/248 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+ G + ++ SSL+ +Y KC + A +V EEMP+++V W +++ + + +
Sbjct: 16 IKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAV 75
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L+ +MR++ + N F F S++SA G G S H + GF S I ++N+ ++MY
Sbjct: 76 QLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMY 135
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
K +VE F M +++ S N++++G+ + + +++ + +P+ TF+
Sbjct: 136 MKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFI 195
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
++ +C G + EGK + K G+ P+ ++ +V++ + G A ++P
Sbjct: 196 SILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP-E 254
Query: 402 PNAVIWEA 409
+ V W A
Sbjct: 255 RDVVSWTA 262
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 61/140 (43%)
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
+ I+ G + +SL+++Y KC +++ A V M +D+ WN ++
Sbjct: 14 RVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQE 73
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
A+ LF M R++ + F +IS+ G G+ + K+G + ++ + V
Sbjct: 74 AVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVT 133
Query: 381 LLGRAGLLEEARDFIKQMPI 400
+ + +E F K M I
Sbjct: 134 MYMKTQSVENGWQFFKAMMI 153
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 252/457 (55%), Gaps = 31/457 (6%)
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHH---------DLHRERLKVDASF--- 137
H + + +FD + + VV +I+ + ++ + L+V +F
Sbjct: 162 HMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEI 221
Query: 138 -LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
L + VT+CG + + G G + N + ++LI +Y+KC + A ++F+ M
Sbjct: 222 TLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGM 281
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
R+VV+W+A+I+ + Q Q L L+ M+ + +EPND T S+LSAC GAL G+
Sbjct: 282 QSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGK 341
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H R I + +L+ Y KCG +++AV F +M K+ +W ++I G A +G
Sbjct: 342 WVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNG 401
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHY 375
A++LF M K ++P +TF+GV+ +C H LVEEG+ +FDSM + +G+KP +HY
Sbjct: 402 RGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHY 461
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEP 418
CVVDLLGRAGL++EA FI+ MPI PNAVIW EA + + L P
Sbjct: 462 GCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNP 521
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
+ ++ L+N+YA V W AA +RK MKD+G++ PGCS IE+ VV F AED +
Sbjct: 522 SHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHP 581
Query: 479 RLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKR 515
+L EI ++ ++D++K GY+P + +++ H++
Sbjct: 582 QLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEK 618
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 139/276 (50%), Gaps = 1/276 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D ++ A+ SC + G Q A++ G +A+ +V SSLI +Y+ CR + A +F
Sbjct: 118 DQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLF 177
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ + VV W AII A+ + +E+++ M + ++ T S+++AC G
Sbjct: 178 DAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAK 237
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ G + +LI MY KCG + +A +F+ M +D+V+W++MI+GY
Sbjct: 238 LGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYT 297
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q A+ LF EM V+P+ +T + V+S+C G +E GK + + L +
Sbjct: 298 QADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTII 357
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD + G +++A + + MP+ N+ W A
Sbjct: 358 LGTALVDFYAKCGCIDDAVEAFESMPV-KNSWTWTA 392
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T L +C+ L GR ++ G + V +SLI MY C +V A +
Sbjct: 117 PDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLL 176
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ + +V WN++I Y ++G + +++F+ M++ V D IT + V+++C G
Sbjct: 177 FDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDA 236
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ GK + + + GL + + ++D+ + G L +AR M + V W A
Sbjct: 237 KLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSR-DVVAWSA 291
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 254/462 (54%), Gaps = 40/462 (8%)
Query: 82 HLDSQKFNHD----------FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH--HDLHRE 129
HL S +F D + S + VFD++ + +V LI+ + +D+ E
Sbjct: 76 HLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAE 135
Query: 130 -----------RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
R K + ++ + + G+ + G LA++ + +VYVGS+L+
Sbjct: 136 AIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLD 195
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y++C + A VF+++ +N VSW A+I+ FA++ + L ++ M+ + E FT
Sbjct: 196 MYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFT 255
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
++SI SA G GAL QG+ H I+ V N+++ MY K G++ +A VF +
Sbjct: 256 YSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVL 315
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
KD+V+WNSM+ +AQ+GL A+ FEEM K + + I+FL ++++C HGGLV+EGK
Sbjct: 316 NKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKH 375
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
YFD + ++ L+PE++HY VVDLLGRAGLL A FI +MP+ P A +W
Sbjct: 376 YFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHK 435
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AA+ L+P+ + V L N+YA WD AARVRK+MK G+K P CSW+
Sbjct: 436 NAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWV 495
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
EI N V+ F A D ++ R EI + D + +++ GYVP++
Sbjct: 496 EIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDM 537
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 140/268 (52%), Gaps = 1/268 (0%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+T+C ++N+ + F + ++ +SLI LY KC +++A+KVF++M +++
Sbjct: 58 ITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDM 117
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWT++IA +AQ + L M +PN FTF S+L A G G H
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHAL 177
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ + + V ++L+ MY +CG ++ A VF+ + K+ VSWN++I+G+A+ G A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ +F EM + + T+ + S+ G +E+GK M K K + ++D+
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDM 297
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++G + +AR +++ + + V W +
Sbjct: 298 YAKSGSMIDARKVFERV-LNKDLVTWNS 324
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
L P + + ++AC S L R H F + NSLI +YCKCG+V EA
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF+ M KD+VSW S+IAGYAQ+ + AI L M+K R KP+ TF ++ + G
Sbjct: 107 KVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAV--GA 164
Query: 352 LVEEGKVYFDSMAKHGLKPELDHY------SCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
+ G H L + D + S ++D+ R G ++ A ++ N V
Sbjct: 165 YADSGI----GGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-SKNGV 219
Query: 406 IWEA 409
W A
Sbjct: 220 SWNA 223
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 252/462 (54%), Gaps = 40/462 (8%)
Query: 82 HLDSQKFNHD----------FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH--HDLHRE 129
HL S +F D + S + VFD++ +V LI+ + +D+ E
Sbjct: 76 HLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAE 135
Query: 130 -----------RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
R K + ++ + + G+ + G LA++ + +VYVGS+L+
Sbjct: 136 AIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLD 195
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y++C + A VF+++ +N VSW A+I+ FA++ + L ++ M+ + E FT
Sbjct: 196 MYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFT 255
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
++SI S G GAL QG+ H ++ V N+++ MY K G++ +A VF +
Sbjct: 256 YSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVL 315
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
KD+V+WNSM+ +AQ+GL A+ FEEM K + + ITFL ++++C HGGLV+EGK
Sbjct: 316 NKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKH 375
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
YFD + ++ L+PE++HY VVDLLGRAGLL A FI +MP+ P A +W
Sbjct: 376 YFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHK 435
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AA+ L+P+ + V L N+YA WD AARVRK+MK G+K P CSW+
Sbjct: 436 NAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWV 495
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
EI N V+ F A D ++ R EI + D + +++ GYVP++
Sbjct: 496 EIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDM 537
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
L P + + ++AC S L R H F + NSLI +YCKCG+V EA
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF+ M KD+VSW S+IAGYAQ+ + AI L M+K R KP+ TF
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTF---------AS 157
Query: 352 LVEEGKVYFDSMAK---HGLKPELDHY------SCVVDLLGRAGLLEEARDFIKQMPIYP 402
L++ Y DS H L + D + S ++D+ R G ++ A ++
Sbjct: 158 LLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-SK 216
Query: 403 NAVIWEA----------AESRLLLEPEC-----AATHVQLANLYAGV 434
N V W A E+ L++ E ATH +++++G+
Sbjct: 217 NGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGL 263
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 282/521 (54%), Gaps = 31/521 (5%)
Query: 4 IFLQTCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDST 63
+ L T KP + + YR C+ L + S+SL + L++ I +
Sbjct: 1 MLLSTSTAIKPSQNPLNQNSFEQNYRQICNLLL-SFTRSRSLRQGLQLHAHILKFGLQTI 59
Query: 64 KTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSS-NVFDQLLDTPVVDVEKLISM 122
H LI + +T Q F+ +++T+ S + F Q + P++ ++ M
Sbjct: 60 PLVSH-NLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQN-EAPLLALQFFRRM 117
Query: 123 HHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
+D ++ D +A +CG R G CLA++TG+ +V+VGSSL+ +Y+K
Sbjct: 118 LND----GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAK 173
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP---NDFTF 239
C I DA +F+EMP RNVVSW+ +I +A Q+D +E + + +++E NDFTF
Sbjct: 174 CGEIGDARHLFDEMPERNVVSWSGMIYGYA---QLDDGVEALTLFKQALIEDVDVNDFTF 230
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S++ C+ S L G+ H ++M F S V ++LIS+Y KCG +E A VF+ +
Sbjct: 231 SSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPT 290
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+++ WNSM+ AQH R LFEEM +KP+ I FL V+ +C H GLVE+G+ Y
Sbjct: 291 RNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREY 350
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------- 409
F M +G++PE +HY+ +VDLLGRAG L+EA IKQMP+ P +W A
Sbjct: 351 FSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKD 410
Query: 410 -------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIE 462
A+ L ++ + HV L+N YA +++AAR+RK+++D+G+K G SW+E
Sbjct: 411 TEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVE 470
Query: 463 IMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
N V+ F A D+S+ + EI L+ L ++M+ GYV +
Sbjct: 471 EGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADT 511
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 248/423 (58%), Gaps = 23/423 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + ++ ++ L VD L++ +T+ + +++ GG + I++G+ N +VGS LI
Sbjct: 223 KALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLI 282
Query: 178 TLYSKCR-VIIDAYKVFEEMPVRNVVSWTAIIAAFA-QEWQVDMCLELYRMMRNSMLEPN 235
LYSKC ++D KVF+E+ ++V W +I+ ++ E D LE +R ++ P+
Sbjct: 283 DLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPD 342
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYVF 294
D + ++SAC+ + QGR H +++ S I V N+LI+MY KCGN+ +A +F
Sbjct: 343 DCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLF 402
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M + VS+NSMIAGYAQHG+ +++ LF+ M++ P ITF+ V+++C H G VE
Sbjct: 403 DTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVE 462
Query: 355 EGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---- 409
+GK+YF+ M K G++PE H+SC++DLLGRAG L EA I+ +P P W A
Sbjct: 463 DGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGA 522
Query: 410 ------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A +RLL L+P AA +V LAN+Y+ AA VRKLM+D+G+K P
Sbjct: 523 CRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKP 582
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKV--DDASHK 514
GCSWIE+ ++ F AED + + +I L+ ++ ++K +GY PEV V DD +
Sbjct: 583 GCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQ 642
Query: 515 RTE 517
R E
Sbjct: 643 REE 645
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR----------------- 184
+ +C + R++R G L I++ + Y+ + + LYSKCR
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 185 ----VIIDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
+I AY ++F+EMP + VS+ +IAA+A+ +L+ MR +
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
L+ + FT + I++AC + +G R H ++ G SY+ V N+LI+ Y K G ++EA
Sbjct: 135 FLDMDGFTLSGIITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192
Query: 291 VYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
+F+ + +D VSWNSM+ Y QH +A++L+ EM + + D T V+++ +
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTN 252
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR-AGLLEEARDFIKQMPIYPNAVIW 407
+ G + + K G S ++DL + G + + R ++ P+ V+W
Sbjct: 253 VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEIS-NPDLVLW 310
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+F L C L G+S H I+ + ++N + +Y KC + A VF++
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
H ++ S+N++I+ YA+ A LF+EM +PD++++ +I++
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAA 114
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 225/384 (58%), Gaps = 19/384 (4%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+F+S + SC S ++ G ++ N +VG++L+ +Y+K R + DA +F
Sbjct: 534 TFISI-LRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNR 592
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ R++ +WT I+A +AQ+ Q + ++ + M+ ++PN+FT S LS C+ L G
Sbjct: 593 LIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 652
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H I+ G + VA++L+ MY KCG VE+A VF+ + +D VSWN++I GY+QH
Sbjct: 653 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 712
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDH 374
G +A+ FE M+ + PD +TF+GV+S+C H GL+EEGK +F+S++K +G+ P ++H
Sbjct: 713 GQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH 772
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLE 417
Y+C+VD+LGRAG E FI++M + N +IWE AA LE
Sbjct: 773 YACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELE 832
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
PE + ++ L+N++A WD VR LM +G+K PGCSW+E+ V+ F + D S+
Sbjct: 833 PEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSH 892
Query: 478 TRLSEILPVLDFLVDQMKTLGYVP 501
++ EI L L ++ ++GY P
Sbjct: 893 PKIREIHLKLQDLHQKLMSVGYTP 916
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 171/359 (47%), Gaps = 26/359 (7%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D EK++++ + + LST + C ++ N+R G LAIR G + ++
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
L+ +YSKC + DA KVF + +VVSW+AII Q+ Q E+++ MR+S + P
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N FT S++SA T G L G S H + GF V N+L++MY K G+V++ VF
Sbjct: 430 NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVF 489
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+D++SWN++++G+ + + +F +M+ + P+ TF+ ++ SC V+
Sbjct: 490 EATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 549
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
GK + K+ L + +VD+ + LE+A ++ I + W
Sbjct: 550 LGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVI---- 604
Query: 415 LLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN--------PGCSWIEIMN 465
A + Q V+C+ Q M+ +G+K N GCS I ++
Sbjct: 605 ------VAGYAQDGQGEKAVKCFIQ-------MQREGVKPNEFTLASSLSGCSRIATLD 650
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 142/273 (52%), Gaps = 5/273 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S + +C S ++ G I++G + ++ +SL+ +Y+KC A KVF E+P
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+VVSWTA+I F E + L+ MR +E N+FT+ + L AC+ L G+
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + I++G FS + V ++L+ +Y KCG + A VF M ++ VSWN+++ G+AQ G A
Sbjct: 252 HAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDA 311
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY--S 376
+ ++LF M + T V+ C + G + G++ + G ELD +
Sbjct: 312 EKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGC--ELDEFISC 369
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
C+VD+ + GL +A ++ P+ V W A
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIE-DPDVVSWSA 401
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 135/258 (52%), Gaps = 2/258 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ ++ RE ++ + +TA+ +C ++ G AI+ G ++++VGS+L+ L
Sbjct: 214 VNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDL 273
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC ++ A +VF MP +N VSW A++ FAQ + L L+ M S + + FT
Sbjct: 274 YAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTL 333
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+++L C SG L G+ H IR+G ++ L+ MY KCG +A+ VF +
Sbjct: 334 STVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIED 393
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
D+VSW+++I Q G + A ++F+ M V P+ T ++S+ G + G+
Sbjct: 394 PDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESI 453
Query: 360 FDSMAKHGLKPELDHYSC 377
+ K+G E D+ C
Sbjct: 454 HACVCKYGF--EYDNTVC 469
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 125/255 (49%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++ V++ ++ G + GF + V ++L+T+Y K + D +VFE
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATT 493
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+++SW A+++ F D L ++ M PN +TF SIL +C+ + G+
Sbjct: 494 NRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 553
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H Q ++ V +L+ MY K +E+A +FN + +D+ +W ++AGYAQ G
Sbjct: 554 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 613
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+A+ F +M ++ VKP+ T +S C ++ G+ K G ++ S
Sbjct: 614 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASA 673
Query: 378 VVDLLGRAGLLEEAR 392
+VD+ + G +E+A
Sbjct: 674 LVDMYAKCGCVEDAE 688
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
++ +L C G L +G++ H Q I+ G + NSL+++Y KCG+ A VF +
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+D+VSW ++I G+ G A++LF EM ++ V+ + T+ + +C +E GK
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K G +L S +VDL + G + A MP NAV W A
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNA 300
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/395 (37%), Positives = 231/395 (58%), Gaps = 19/395 (4%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
+LK D+ LS+ + ++ G A+R GF +V++GSSLI +Y+KC + +
Sbjct: 222 KLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECS 281
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
+ F +P ++ +SW +IIA Q + D L +R M ++P +F+S++ AC
Sbjct: 282 LRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHL 341
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
AL GR H +R+GF +A+SL+ MY KCGN++ A YVF+ + +D+V+W ++I
Sbjct: 342 TALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAII 401
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GL 368
G A HG A+ A+ LFE M++ V+P + F+ V+++C H GLV+EG YF+SM + G+
Sbjct: 402 MGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGI 461
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM-PIYPNAVIW-------------EAAE--- 411
P L+HY+ V DLLGRAG LEEA DFI M + P +W E AE
Sbjct: 462 APGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVL 521
Query: 412 SRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
+LL ++ E +V ++N+Y+ + W AAR+R M+ KGLK P CSWIE+ N V+ F
Sbjct: 522 DKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTF 581
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
A DKS+ +I LD L++QM+ GYV + ++
Sbjct: 582 MAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQ 616
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 129/247 (52%), Gaps = 16/247 (6%)
Query: 162 IRTGFIANVYVGSSLITLYSK---CRVIIDAY------------KVFEEMPVRNVVSWTA 206
+R G +++Y+ ++LI Y+K + D + KVF+ MPVR+VVSW
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 207 IIAAFAQEWQVDMCLELYRMM-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
+IA FAQ L++ R M +N L+P+ FT +SIL + +G+ H +R
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
GF + + +SLI MY KC +E ++ F + KD +SWNS+IAG Q+G R + F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
M+K+ VKP A++F VI +C H + G+ + + G S +VD+ +
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376
Query: 386 GLLEEAR 392
G ++ AR
Sbjct: 377 GNIKMAR 383
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
+W++II + + + + MR+ + PN F S+L A T S H T
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAV---------------YVFNNMHGKDIVSWNS 307
+R+G S + +AN+LI+ Y K N + VF+ M +D+VSWN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+IAG+AQ+G+ V A+D+ EM K ++KPD+ T ++ V +GK ++
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP--NAVIWEA 409
G ++ S ++D+ + LE + ++ I P +A+ W +
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECS---LRAFYILPRKDAISWNS 298
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
+E +K A S+ + +C + G +R GF N ++ SSL+ +Y+KC I
Sbjct: 321 KENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIK 380
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A VF+ + R++V+WTAII A + L+ M + P F ++L+AC+
Sbjct: 381 MARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACS 440
Query: 248 GSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-- 304
+G + +G R + G ++ ++ + + G +EEA +NM G
Sbjct: 441 HAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSV 500
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
W+ ++A H ++++L E+++ + + D+
Sbjct: 501 WSILLAACRAH----KSVELAEKVLDKLLSVDS 529
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 207/347 (59%), Gaps = 18/347 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++++ Y I +A FEEMP RN+++WT +I+ AQ + L+L+ M++ E
Sbjct: 365 NAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFE 424
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P D+ F + AC AL GR H Q +R+GF S + N+LI+MY KCG VE A +
Sbjct: 425 PCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCL 484
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M D VSWN+MIA QHG +A++LFE M+K+ + PD ITFL V+S+C H GLV
Sbjct: 485 FLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLV 544
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
EEG YF SM+ +G+ P DHY+ ++DLL RAG EA+D I+ MP+ P IWE
Sbjct: 545 EEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLA 604
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
AAE L P+ T+V L+N+YA V WD A+VRKLM+DKG+K
Sbjct: 605 GCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKE 664
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PGCSWIE+ N V+ F +D + + + L+ L +M+ LGY+P+
Sbjct: 665 PGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPD 711
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 50/251 (19%)
Query: 164 TGFIANVYVGSSLITLYSKC---------RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE 214
+GF+ +V ++L++++ KC ++ A K+F+EM R+ +SWT +IA + +
Sbjct: 181 SGFVTSVL--NALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRN 238
Query: 215 WQVDMC-------------------------------LELYRMMRNSMLEPNDFTFTSIL 243
++D LE++R M ++ ++FT+TS+L
Sbjct: 239 GELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVL 298
Query: 244 SACTGSGALGQGRSAHCQTIRM----GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
SAC +G G+ H +R + V N+L ++Y KCG V+EA VFN M
Sbjct: 299 SACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPV 358
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
KD+VSWN++++GY G A FEEM ++ + +T+ +IS G EE
Sbjct: 359 KDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNL----LTWTVMISGLAQNGFGEESLKL 414
Query: 360 FDSMAKHGLKP 370
F+ M G +P
Sbjct: 415 FNRMKSEGFEP 425
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 136/332 (40%), Gaps = 91/332 (27%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC- 220
I +GF Y+ + LI +Y K ++ A+ +F+E+ ++V+ T +IAA + ++
Sbjct: 42 IASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAR 101
Query: 221 --------------------------------LELYRMMRNSMLEPNDFTFTSILSACTG 248
+EL+R + + P++FTFTS+L
Sbjct: 102 EIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL----- 156
Query: 249 SGALG-------QGRSAHCQTIRMGFFSYIQVANSLISMYCKC----------------- 284
GAL Q + HC ++ G V N+L+S++ KC
Sbjct: 157 -GALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARK 215
Query: 285 -----------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
G ++ A + M K +V+WN+MI+GY HG + A
Sbjct: 216 LFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEA 275
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+++F +M ++ D T+ V+S+C + G GK + + +P LD V +
Sbjct: 276 LEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNA 335
Query: 382 LG----RAGLLEEARDFIKQMPIYPNAVIWEA 409
L + G ++EAR QMP+ + V W A
Sbjct: 336 LATLYWKCGKVDEARQVFNQMPV-KDLVSWNA 366
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 9/201 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ A+ +C + G +R GF +++ G++LIT+Y+KC V+ A+ +F MP
Sbjct: 430 FAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMP 489
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG-R 256
+ VSW A+IAA Q LEL+ +M + P+ TF ++LS C+ +G + +G R
Sbjct: 490 YLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHR 549
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM---HGKDIVSWNSMIAGYA 313
+ G +I + C+ G EA + M G I W +++AG
Sbjct: 550 YFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPI--WEALLAGCR 607
Query: 314 QHG---LAVRAIDLFEEMMKQ 331
HG L ++A + E+M Q
Sbjct: 608 IHGNMDLGIQAAERLFELMPQ 628
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 33/124 (26%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS----------- 304
R+ H I GF + N LI +YCK ++ A ++F+ + DIV+
Sbjct: 35 RTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSA 94
Query: 305 ----------------------WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
+N+MI GY+ + AI+LF ++++ +PD TF
Sbjct: 95 GNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTS 154
Query: 343 VISS 346
V+ +
Sbjct: 155 VLGA 158
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 235/400 (58%), Gaps = 18/400 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + ++ + ++K + S+ + +C + +I G L ++ + VG+SLI++
Sbjct: 235 IELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISM 294
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YS+C + +A K F+ + +N+VS+ I+ A+A+ + EL+ + + N FTF
Sbjct: 295 YSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTF 354
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+LS + GA+G+G H + ++ GF S + + N+LISMY +CGN+E A VFN M
Sbjct: 355 ASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGD 414
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+++SW SMI G+A+HG A RA++ F +M++ V P+ +T++ V+S+C H GL+ EG +
Sbjct: 415 GNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKH 474
Query: 360 FDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F SM +HG+ P ++HY+CVVDLLGR+G LEEA + + MP +A++
Sbjct: 475 FKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHG 534
Query: 408 ------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AAE L +P A ++ L+NL+A W++ A +RK MK++ L GCSWI
Sbjct: 535 NMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWI 594
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
E+ N V++F D S+ + EI LD L ++K LGY+P
Sbjct: 595 EVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIP 634
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 158/321 (49%), Gaps = 18/321 (5%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDLHRERLKVDASF-------------LSTAVTSCGSTRN 150
VFD++ D VV +I+ L R VD LS V++C
Sbjct: 101 VFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGL 160
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFEEMPVRNVVSWTAI 207
+ G + CL +++G +V VG SL+ +Y+KC + DA KVF+ MPV NV+SWTAI
Sbjct: 161 LSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAI 220
Query: 208 IAAFAQEWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
I + Q D +EL+ M ++PN FTF+S+L AC + G + ++M
Sbjct: 221 ITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMR 280
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
S V NSLISMY +CGN+E A F+ + K++VS+N+++ YA+ + A +LF
Sbjct: 281 LASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFN 340
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
E+ +A TF ++S G + +G+ + K G K L + ++ + R G
Sbjct: 341 EIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCG 400
Query: 387 LLEEARDFIKQMPIYPNAVIW 407
+E A +M N + W
Sbjct: 401 NIEAAFQVFNEMGD-GNVISW 420
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 170/340 (50%), Gaps = 33/340 (9%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIID-AYKVFEEMPVRNV 201
+C + NI G ++TG+ ++V VG +LI ++ K ++ AYKVF+ MP RNV
Sbjct: 51 ACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNV 110
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
V+WT +I F Q ++L+ M S P+ FT + ++SAC G L GR HC
Sbjct: 111 VTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCL 170
Query: 262 TIRMGFFSYIQVANSLISMYCKC---GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
++ G + V SL+ MY KC G+V++A VF+ M +++SW ++I GY Q G
Sbjct: 171 VMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGC 230
Query: 319 VR-AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
R AI+LF EM++ +VKP+ TF V+ +C + + G+ + + +K L +C
Sbjct: 231 DREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALV----VKMRLASINC 286
Query: 378 V----VDLLGRAGLLEEARD-----FIKQMPIYPNAVIWEAAES-------RLLLEPECA 421
V + + R G +E AR F K + Y N ++ A+S L E E A
Sbjct: 287 VGNSLISMYSRCGNMENARKAFDVLFEKNLVSY-NTIVNAYAKSLNSEEAFELFNEIEGA 345
Query: 422 ATHVQ---LANLYAG---VRCWDQAARVRKLMKDKGLKTN 455
T V A+L +G + + ++ + G K+N
Sbjct: 346 GTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSN 385
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 120/234 (51%), Gaps = 6/234 (2%)
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R++VSW+A+I+ +A + + + M PN++ FT + AC+ + G+
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 259 HCQTIRMGFF-SYIQVANSLISMYCKC-GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
++ G+F S + V +LI M+ K G++E A VF+ M +++V+W MI + Q G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+ A+DLF +M+ PD T GV+S+C GL+ G+ + + K GL ++
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 377 CVVDLLGRA---GLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQL 427
+VD+ + G +++AR +MP++ N + W A + + C ++L
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAIITGYVQSGGCDREAIEL 237
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 233/404 (57%), Gaps = 18/404 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+K ++ + ++ D L+ AV++C + ++ G A +GF +++ ++L
Sbjct: 556 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNAL 615
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+TLYSKC I +AY FE+ + ++W A+++ F Q + L ++ M ++ N+
Sbjct: 616 VTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNN 675
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FTF S + A + + + QG+ H + G+ S +V N++ISMY KCG++ +A F
Sbjct: 676 FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLE 735
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ K+ VSWN+MI Y++HG A+D F++M+ V+P+ +T +GV+S+C H GLV++G
Sbjct: 736 LSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 795
Query: 357 KVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
YF+SM ++GL P+ +HY CVVD+L RAGLL A+DFI +MPI P+A++W
Sbjct: 796 IEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACV 855
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AA L LEPE +AT+V L+NLYA R WD R+ MK+KG+K PG
Sbjct: 856 VHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQ 915
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SWIE+ N ++ F D+++ EI L + +GYV +
Sbjct: 916 SWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQD 959
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + + + + L+ D++ L++ V +C S + G + GF +N + +L
Sbjct: 354 EKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGAL 413
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LY+KC I A F E V NVV W ++ A+ + ++R M+ + PN
Sbjct: 414 LNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 473
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+T+ SIL C G L G H Q I+ F V + LI MY K G ++ A +
Sbjct: 474 YTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 533
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
GKD+VSW +MIAGY Q+ +A+ F +M+ + ++ D + +S+C ++EG
Sbjct: 534 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 593
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G +L + +V L + G +EEA +Q N + W A
Sbjct: 594 QQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDN-IAWNA 645
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 126/248 (50%), Gaps = 1/248 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+T F N YV S LI +Y+K + A+ + ++VVSWT +IA + Q D L
Sbjct: 500 IKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 559
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+R M + + ++ T+ +SAC G AL +G+ H Q GF S + N+L+++Y
Sbjct: 560 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 619
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCGN+EEA F D ++WN++++G+ Q G A+ +F M ++ + + TF
Sbjct: 620 SKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFG 679
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
+ + +++GK + K G E + + ++ + + G + +A+ ++ +
Sbjct: 680 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSM- 738
Query: 402 PNAVIWEA 409
N V W A
Sbjct: 739 KNEVSWNA 746
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 133/260 (51%), Gaps = 4/260 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+ +++C ++ G L ++ GF ++ YV ++L++LY +I A +F M
Sbjct: 274 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMS 333
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+ V++ +I +Q + +EL++ M+ LEP+ T S++ AC+ G L G+
Sbjct: 334 QRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQ 393
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H T ++GF S ++ +L+++Y KC ++E A+ F +++V WN M+ Y
Sbjct: 394 LHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDD 453
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ +F +M + + P+ T+ ++ +C G +E G+ + K +L+ Y C
Sbjct: 454 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSF--QLNAYVC 511
Query: 378 --VVDLLGRAGLLEEARDFI 395
++D+ + G L+ A D +
Sbjct: 512 SVLIDMYAKLGKLDTAWDIL 531
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 129/247 (52%), Gaps = 3/247 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMC 220
I G + V + LI LYS+ + A +VF+ + +++ SW A+I+ ++ E +V+
Sbjct: 197 IYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVE-A 255
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+ L+ M + P + F+S+LSAC +L G H +++GF S V N+L+S+
Sbjct: 256 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 315
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y G++ A ++F+NM +D V++N++I G +Q G +A++LF+ M ++PD+ T
Sbjct: 316 YFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTL 375
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
++ +C G + G+ K G +++L + +E A ++ + +
Sbjct: 376 ASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEV 435
Query: 401 YPNAVIW 407
N V+W
Sbjct: 436 -ENVVLW 441
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 108/240 (45%), Gaps = 5/240 (2%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ GF N + L+ Y + A KVF+EMP R + +W +I A
Sbjct: 95 LKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVF 154
Query: 222 ELYRMMRNSMLEPNDFTFTSILSAC-TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L+ M N + PN+ TF+ +L AC GS A H + I G V N LI +
Sbjct: 155 CLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDL 214
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y + G V+ A VF+ ++ KD SW +MI+G +++ V AI LF +M + P F
Sbjct: 215 YSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAF 274
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC--VVDLLGRAGLLEEARDFIKQM 398
V+S+C+ +E G+ + K G D Y C +V L G L A M
Sbjct: 275 SSVLSACKKIESLEIGEQLHGLVLKLGFSS--DTYVCNALVSLYFHLGSLISAEHIFSNM 332
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 227 MRNSMLEPNDFTFTSILSACTGS-GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
+ N + PN T +L C + G+L +GR H Q +++GF + ++ L+ Y G
Sbjct: 58 VENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKG 117
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
+++ A+ VF+ M + I +WN MI A L+ + LF M+ + V P+ TF GV+
Sbjct: 118 DLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLE 177
Query: 346 SCRHGGLVEEGKVYFDSMAK-------HGLKPELDHYSCVVDLLGRAGLLEEAR 392
+CR G V FD + + GL + ++DL R G ++ AR
Sbjct: 178 ACRG------GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRAR 225
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 246/432 (56%), Gaps = 32/432 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMH----------HDLHRERLKV----DASFLSTAVTSCGSTR 149
+FDQ+LD V +I+ + DL R + + S+ + +C +
Sbjct: 331 IFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLA 390
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+R G A++ GF + V +SLI++Y++ I DA K F+ + +N++S+ +I
Sbjct: 391 ALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVID 450
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
A+A+ + LEL+ + + + + FTF S+LS G +G+G H + I+ G
Sbjct: 451 AYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
V N+LISMY +CGN+E A VF +M ++++SW S+I G+A+HG A +A++LF +M+
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLL 388
++ V+P+ +T++ V+S+C H GLV EG +F SM +HG+ P ++HY+C+VD+LGR+G L
Sbjct: 571 EEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSL 630
Query: 389 EEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLY 431
EA FI MP +A++W AA+ + EP A ++ L+NLY
Sbjct: 631 SEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLY 690
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A + WD+ + +RK MK+K L GCSW+E+ N V++F D S+ + +EI L L
Sbjct: 691 ASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLS 750
Query: 492 DQMKTLGYVPEV 503
++K LGYVP +
Sbjct: 751 VKIKKLGYVPNL 762
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 140/265 (52%), Gaps = 4/265 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFE 194
LS +++C + + G AIR G + VG LI +Y+KC V + A K+F+
Sbjct: 274 LSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFD 333
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
++ NV SWTA+I + Q+ D L+L+R M + + PN FTF+S L AC AL
Sbjct: 334 QILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALR 393
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G +++GF S VANSLISMY + G +++A F+ + K+++S+N++I YA
Sbjct: 394 IGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYA 453
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
++ + A++LF E+ Q + A TF ++S G + +G+ + K GLK
Sbjct: 454 KNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++ + R G +E A + M
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDM 538
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 14/265 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRV-IIDAYKVFEE 195
+ A +C + + G I+TG++ ++V VG LI ++ K R ++ A+KVFE+
Sbjct: 171 FAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP RN V+WT +I Q ++L+ M S EP+ FT + ++SAC L G
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLG 290
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKC---GNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+ H Q IR G V LI+MY KC G++ A +F+ + ++ SW +MI GY
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGY 350
Query: 313 AQH-GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Q G A+DLF M+ V P+ TF + +C + + G+ F H +K
Sbjct: 351 VQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF----THAVKLG 406
Query: 372 LDHYSCV----VDLLGRAGLLEEAR 392
+CV + + R+G +++AR
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDAR 431
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEM-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
+SLI+LYSKC A +F M R+++SW+A+++ FA L + M +
Sbjct: 105 NSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKC-GNVEEA 290
PN++ F + AC+ + + G S I+ G+ S + V LI M+ K G++ A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF M ++ V+W MI Q G A AIDLF +M+ +PD T GVIS+C +
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM 284
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA---GLLEEARDFIKQMPIYPNAVIW 407
L+ G+ +HGL + C++++ + G + AR Q+ + N W
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVFSW 343
Query: 408 EA 409
A
Sbjct: 344 TA 345
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
NSLIS+Y KCG E+A +F M +D++SW++M++ +A + + RA+ F +M++
Sbjct: 105 NSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG-LKPELDHYSCVVDLL--GRAGLLEE 390
P+ F +C V G F + K G L+ ++ ++D+ GR L+
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 391 ARDFIKQMPIYPNAVIWEAAESRLL 415
+ F ++MP NAV W +RL+
Sbjct: 225 FKVF-EKMP-ERNAVTWTLMITRLM 247
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/361 (39%), Positives = 216/361 (59%), Gaps = 22/361 (6%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+++ Y R + +A F EMP +N++SW +I+ AQ + L+ + M+ EP
Sbjct: 365 ILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPC 424
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
D+ F + +C+ G+L GR H Q +R G+ S + N+LI+MY +CG V+ A +F
Sbjct: 425 DYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFI 484
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
NM D +SWN+MIA QHG +AI+LFEEM+K+ + PD I+FL VIS+C H GLV+E
Sbjct: 485 NMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKE 544
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------- 407
G+ YFDSM +G+ P+ +HY+ ++DLL RAG EA++ ++ MP P A IW
Sbjct: 545 GRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGC 604
Query: 408 ----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
EAAE L+P+ T+V L+N+YA W+ A+VRKLM+D+G+K PG
Sbjct: 605 RIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPG 664
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE----VHEEKVDDASH 513
CSWIE+ N V+ F D ++ + +I L+ LV +M+ +GYVP+ +H+ + D H
Sbjct: 665 CSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEH 724
Query: 514 K 514
+
Sbjct: 725 E 725
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 137/321 (42%), Gaps = 78/321 (24%)
Query: 164 TGFIANVYVGSSLITLYSKCR---------VIIDAYKVFEEMPVRNVVSWTAIIAAFAQE 214
TGF+ +V ++LI+ Y KC ++ +A K+F+EMP R+ +SWT II + +
Sbjct: 179 TGFVTSVL--NALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKN 236
Query: 215 WQVDMC-------------------------------LELYRMMRNSMLEPNDFTFTSIL 243
+D E++R M S ++ ++FTFTS++
Sbjct: 237 NDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVI 296
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVA----NSLISMYCKCGNVEEAVYVFNNMHG 299
S C +G G+ H ++ VA N+LI+ Y KCG V+ A +FN M
Sbjct: 297 SVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPE 356
Query: 300 KDIVSWNSMIAGY-------------------------------AQHGLAVRAIDLFEEM 328
+D+VSWN +++GY AQ G A A+ F M
Sbjct: 357 RDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRM 416
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
Q +P F G I SC G ++ G+ + ++G + L + ++ + R G++
Sbjct: 417 KLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVV 476
Query: 389 EEARDFIKQMPIYPNAVIWEA 409
+ A MP +A+ W A
Sbjct: 477 DAAHCLFINMPCV-DAISWNA 496
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 143/339 (42%), Gaps = 78/339 (23%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
++LI YS + + K+F + P+ R+ V + A+I A++ +EL+ M+
Sbjct: 83 TTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDN 142
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQ-----TIRMGFFSYIQVANSLISMYCKCGN 286
P+++TFTS+L G+ AL + HCQ ++ G V N+LIS Y KC
Sbjct: 143 FRPDNYTFTSVL----GALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAA 198
Query: 287 ---------VEEAVYVFNNMHGKD-------------------------------IVSWN 306
+ EA +F+ M +D V+WN
Sbjct: 199 SPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWN 258
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK----VYFDS 362
+MI+GYA GL + A ++F +M+ +++ D TF VIS C + G GK + +
Sbjct: 259 AMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKT 318
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAA 422
+A + + ++ + G ++ A++ +MP E + +
Sbjct: 319 VANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMP-----------------ERDLVS 361
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
++ L+ Y VRC D+A M +K + SWI
Sbjct: 362 WNIILSG-YVNVRCMDEAKSFFNEMPEKNI-----LSWI 394
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ A+ SC +++ G +R G+ +++ G++LIT+Y++C V+ A+ +F MP
Sbjct: 428 FAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMP 487
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ +SW A+IAA Q Q +EL+ M + P+ +F +++SAC+ +G + +GR
Sbjct: 488 CVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRK 547
Query: 258 AHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYVFNNM---HGKDIVSWNSMIAGYA 313
+ G + +I + C+ G EA V +M G I W +++AG
Sbjct: 548 YFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPI--WEALLAGCR 605
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFL 341
HG I+ E + + + + D L
Sbjct: 606 IHGNIDLGIEAAERLFELKPQHDGTYVL 633
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 33/125 (26%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
R H I GF + N LI +Y K + A Y+F+ + DIV+ ++IA Y+
Sbjct: 32 ARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSA 91
Query: 315 HG-------------LAVR--------------------AIDLFEEMMKQRVKPDAITFL 341
G L +R AI+LF +M + +PD TF
Sbjct: 92 AGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFT 151
Query: 342 GVISS 346
V+ +
Sbjct: 152 SVLGA 156
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 250/430 (58%), Gaps = 31/430 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFLSTAVTSCGSTRN 150
+ +L + VV +I+ + HD+ E L++ D ++A+++C R
Sbjct: 520 ILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRA 579
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+R G + GF A++ + ++LI+LY++C I +AY FE++ +N +SW ++++
Sbjct: 580 LRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSG 639
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
AQ + L+++ M + E N FT+ S +SA + QG+ H ++ G+ S
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSE 699
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+V+NSLIS+Y K G++ +A FN+M ++++SWN+MI GY+QHG + A+ LFEEM
Sbjct: 700 REVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKV 759
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
+ P+ +TF+GV+S+C H GLV+EG YF+SM K H L P+ +HY CVVDLLGRAG L+
Sbjct: 760 CGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLD 819
Query: 390 EARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYA 432
A ++IK+MPI +A+IW AA L LEPE +AT+V ++N+YA
Sbjct: 820 RAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYA 879
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
R W RKLMKD+G+K PG SWIE+ N V+ F A DK + ++I + L
Sbjct: 880 VSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNR 939
Query: 493 QMKTLGYVPE 502
+ +GYV +
Sbjct: 940 RTSEIGYVQD 949
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 139/275 (50%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + + + R+ LK D +++ +++C S + G AI+ G A++ + SL
Sbjct: 344 DRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSL 403
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LYSKC + A+K F N+V W ++ A+ Q + E++R M+ + PN
Sbjct: 404 LDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQ 463
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ SIL CT GAL G H I+ GF + V + LI MY K G + A+ +
Sbjct: 464 FTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRR 523
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ D+VSW +MIAGY QH + A+ LFEEM + ++ D I F IS+C + +G
Sbjct: 524 LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQG 583
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ G +L + ++ L R G ++EA
Sbjct: 584 QQIHAQSYAAGFGADLSINNALISLYARCGRIQEA 618
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 146/293 (49%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I + D+H + LS+ +++ + G CL I+ GF + YV + L
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LYS+ R +I A ++F M R+ VS+ ++I+ Q+ D LEL+ M+ L+P+
Sbjct: 303 VALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDC 362
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T S+LSAC GAL +G H I+ G + I + SL+ +Y KC +VE A F
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT 422
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
++IV WN M+ Y Q + ++F +M + + P+ T+ ++ +C G + G
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + K G + + S ++D+ + G L A ++++P + V W A
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTA 534
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 137/266 (51%), Gaps = 1/266 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C S + G I+TGF NVYV S LI +Y+K + A ++ +P +VVS
Sbjct: 472 TCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS 531
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA+IA + Q L+L+ M ++ ++ F S +SAC G AL QG+ H Q+
Sbjct: 532 WTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSY 591
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
GF + + + N+LIS+Y +CG ++EA F + K+ +SWNS+++G AQ G A+
Sbjct: 592 AAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQ 651
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F M++ + + T+ IS+ +++G+ + K G E + + ++ L
Sbjct: 652 VFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYA 711
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
++G + +A M N + W A
Sbjct: 712 KSGSISDAWREFNDMS-ERNVISWNA 736
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
GF ++ V + LI LYSK I A KVF + ++++V+W A+I+ +Q + + L+
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M S + P + +S+LSA T G HC I+ GF S V N L+++Y +
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
+ A +F+ M+ +D VS+NS+I+G Q G + RA++LF +M + +KPD IT ++
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
S+C G + +G K G+ ++ ++DL + +E A F N
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTET-ENI 428
Query: 405 VIW 407
V+W
Sbjct: 429 VLW 431
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 110/245 (44%), Gaps = 7/245 (2%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C ++GF + SL+ Y + A KVF+E R+V SW +I F +
Sbjct: 81 HCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSN 140
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSG-ALGQGRSAHCQTIRMGFFSYIQVANS 276
L+R M + PN +TF +L AC G A + H +T GF S VAN
Sbjct: 141 FQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANL 200
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI +Y K G +E A VFN + KDIV+W +MI+G +Q+GL AI LF +M + P
Sbjct: 201 LIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPT 260
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
V+S+ L E G+ + K G E Y C G L +R I
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET--YVCN----GLVALYSRSRKLIS 314
Query: 397 QMPIY 401
I+
Sbjct: 315 AERIF 319
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++L M + N + +L C SG+L + HC+ + GF + +SL+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y + G+ AV VF+ + + SWN MI + + LF M+ + + P+ TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 341 LGVISSCRHGGLV-EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
GV+ +C G + K +G + ++DL + G +E A+
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 209/361 (57%), Gaps = 18/361 (4%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+R G ++ V SL+ +Y KC I +A +F++M R+VVSWT +I + + + +
Sbjct: 278 MRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGF 337
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
L+R + NS + PNDFTF +L+AC A G+ H +R+GF S+ A++L+ MY
Sbjct: 338 ALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMY 397
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++E A VF + D+ SW S++ GYAQHG +A+ FE ++K KPD I F+
Sbjct: 398 SKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFI 457
Query: 342 GVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
GV+S+C H GLV++G YF S+ KHGL +DHY+C++DLL RAG EA I +MPI
Sbjct: 458 GVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPI 517
Query: 401 YPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
P+ IW AA+S +EPE AT+V LAN+YA + A +
Sbjct: 518 KPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANI 577
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
R+ M +G+ PG SWIEI V+ F D S+ + EIL L L +MK +GYVP+
Sbjct: 578 RETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDT 637
Query: 504 H 504
+
Sbjct: 638 N 638
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 34/305 (11%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
AS T + C R ++ G I+T +Y+ + L+ +Y+KC ++DA KVF+
Sbjct: 119 ASIYLTLLKFCLKQRALKEGKQVHA-HIKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFD 177
Query: 195 EM-------------------------------PVRNVVSWTAIIAAFAQEWQVDMCLEL 223
EM P R+ SWTAII+ Q + + LEL
Sbjct: 178 EMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALEL 237
Query: 224 YRMM-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
YR+M ++ + N T +S L+A +L G+ H +RMG S V SL+ MY
Sbjct: 238 YRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYG 297
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG++EEA Y+F+ M +D+VSW +MI Y ++G LF +M + P+ TF G
Sbjct: 298 KCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAG 357
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
V+++C + GK M + G S +V + + G +E A+ + +P P
Sbjct: 358 VLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILP-QP 416
Query: 403 NAVIW 407
+ W
Sbjct: 417 DLFSW 421
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
LYR+ + P + ++L C AL +G+ H G + ++N L+ MY
Sbjct: 111 LYRIEK-----PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSIG-LYISNRLLDMYA 164
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG++ +A VF+ M +D+ SWN MI+GY + G +A +LF++M + D ++
Sbjct: 165 KCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTA 220
Query: 343 VISSCRHGGLVEEGKVYFDSMAKH 366
+IS C EE + M KH
Sbjct: 221 IISGCVQHNRPEEALELYRLMQKH 244
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 219/359 (61%), Gaps = 18/359 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I++ + +VG +LI +YSKC ++ A K+ + + + VVSW AII+ F+ + Q +
Sbjct: 457 IKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQ 516
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+ + M ++P++FT+ +IL C + G+ H Q I+ S ++++L+ MY
Sbjct: 517 KTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMY 576
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCGN+++ +F +D V+WN+M+ GYAQHGL A+ +FE M + VKP+ TFL
Sbjct: 577 SKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFL 636
Query: 342 GVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
V+ +C H GLVE+G YF SM + +GL P+L+HYSCVVD++GR+G + +A + I+ MP
Sbjct: 637 AVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPF 696
Query: 401 YPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
+AVIW +AA S L LEPE +A +V L+N+YA W++ ++
Sbjct: 697 EADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKL 756
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
RK+M+ GLK PGCSWIEI + V+ F DK++ R EI LD L D+MK +GY+P+
Sbjct: 757 RKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPD 815
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 171/365 (46%), Gaps = 46/365 (12%)
Query: 66 EVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS--MH 123
E ++ Q D+ ++ F + G + +FD + + VV LIS +H
Sbjct: 94 EFAFKVFDGMPQRDTVSWNAMLFG--YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLH 151
Query: 124 HDLHRERLKV-----------DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
+ HR+ + V D + + + SC S + GG LA++ GF +V
Sbjct: 152 NGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVT 211
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
GS+L+ +Y+KC+ + + + F MP +N VSW+AIIA Q + LEL++ M+ + +
Sbjct: 212 GSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGV 271
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+ TF S+ +C G AL G H ++ F + + + + + MY KC N+ +A
Sbjct: 272 GVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQK 331
Query: 293 VFNNMHGKDIVSWNSMIAGYAQ--HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+FN++ ++ S+N++I GYA+ GL + D ++ G +C
Sbjct: 332 LFNSLPNHNLQSYNAIIVGYARSDKGLGL----------------DEVSLSGAFRACA-- 373
Query: 351 GLVEEGKVYFDSMAKHGL------KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
V +G + + + HGL + + + ++D+ G+ G L EA ++M + +A
Sbjct: 374 --VIKGDL--EGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDA 428
Query: 405 VIWEA 409
V W A
Sbjct: 429 VSWNA 433
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 146/304 (48%), Gaps = 37/304 (12%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L +D LS A +C + G L++++ +N+ V ++++ +Y KC +++A
Sbjct: 358 LGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC 417
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VFEEM R+ VSW AIIAA Q + L L+ + N +++
Sbjct: 418 LVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF--IHNRIIKS---------------- 459
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
R+G S++ +A LI MY KCG +E+A + + + + +VSWN++I+
Sbjct: 460 -------------RLGLDSFVGIA--LIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIIS 504
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G++ + A F +M++ V PD T+ ++ +C + VE GK + K L+
Sbjct: 505 GFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQS 564
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAAESRLLLEPECAATHVQ 426
+ S +VD+ + G +++ + ++ P + NA++ A+ L E ++Q
Sbjct: 565 DAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQ 624
Query: 427 LANL 430
L N+
Sbjct: 625 LENV 628
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 16/254 (6%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+ + + ++ + + V S ++ SC +R G+ A++T F +V +G+
Sbjct: 255 DLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGT 314
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+ + +Y KC + DA K+F +P N+ S+ AII +A+ + L
Sbjct: 315 ATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS--------------DKGLGL 360
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++ + + AC +G H +++ S I VAN+++ MY KCG + EA VF
Sbjct: 361 DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 420
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF--EEMMKQRVKPDAITFLGVISSCRHGGL 352
M +D VSWN++IA + Q+G + + LF ++K R+ D+ + +I G+
Sbjct: 421 EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGM 480
Query: 353 VEEGKVYFDSMAKH 366
+E+ + D +A+
Sbjct: 481 MEKAEKLHDRLAEQ 494
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 35/303 (11%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C + + G I T F V+V + LI +Y KC + A+KVF+ MP R+ VSW
Sbjct: 52 CSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSW 111
Query: 205 TAIIAAFAQEWQVDMCLELYRMMR-------NSMLEP----------------------- 234
A++ +A + + +L+ M NS++
Sbjct: 112 NAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTV 171
Query: 235 -NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ TF +L +C+ G G H ++MGF + ++L+ MY KC ++ ++
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF 231
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F++M K+ VSW+++IAG Q+ ++LF+EM K V TF V SC +
Sbjct: 232 FHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSAL 291
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP----NAVIWEA 409
G K ++ + +D+ + L +A+ +P + NA+I
Sbjct: 292 RLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGY 351
Query: 410 AES 412
A S
Sbjct: 352 ARS 354
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF+ I C+ AL G+ AH + I F + V N LI MY KC ++E A VF+ M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+D VSWN+M+ GYA G A LF+ M ++ D +++ +IS H G
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPER----DVVSWNSLISGYLHNG 153
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 204/353 (57%), Gaps = 18/353 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV +S +++Y KC + A KVF EMP RNVVSW +IA +AQ + EL M+
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+P+ T +IL AC L +G+ H + +++G S VA SLI MY KCG V
Sbjct: 489 AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVA 548
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA VF+ M +D V+WN+M+AGY QHG + A+DLF+ M+K+RV P+ IT VIS+C
Sbjct: 549 EARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACS 608
Query: 349 HGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
GLV+EG+ F M + + P HY C+VDLLGRAG L+EA +FI+ MP P+ +W
Sbjct: 609 RAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVW 668
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AA L LEP A+ ++ L+N+YA WD + +VR++M D+
Sbjct: 669 HALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDR 728
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
GLK + G S IEI ++ F AED ++ + I L+ L +MK GY P++
Sbjct: 729 GLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDM 781
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 156/277 (56%), Gaps = 7/277 (2%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+FLS + +C + + G + G +V V ++LIT+YSKC I A +VF +
Sbjct: 159 TFLSI-LKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK 217
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
M RNVVSWTAII A AQ +++ ELY M + + PN TF S+L++C AL +G
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG 277
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H G + + VAN+LI+MYCKC +V+EA +F+ M +D++SW++MIAGYAQ
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQS 337
Query: 316 GLAVR-AID----LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G + +ID L E M ++ V P+ +TF+ ++ +C G +E+G+ ++K G +
Sbjct: 338 GYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFEL 397
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + + ++ + G + EA +M N V W
Sbjct: 398 DRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAW 433
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 147/279 (52%), Gaps = 1/279 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L V+++ + C R G G ++Y+G+SLI YSK + A
Sbjct: 52 LLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAE 111
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF M +R+VV+W+++IAA+A + + M ++ +EPN TF SIL AC
Sbjct: 112 QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYS 171
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L +GR H MG + + VA +LI+MY KCG + A VF+ M +++VSW ++I
Sbjct: 172 ILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQ 231
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
AQH A +L+E+M++ + P+A+TF+ +++SC + G+ +++ GL+
Sbjct: 232 ANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLET 291
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + ++ + + ++EAR+ +M + + W A
Sbjct: 292 DMIVANALITMYCKCNSVQEAREIFDRMS-KRDVISWSA 329
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 146/304 (48%), Gaps = 37/304 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC + + G G ++ V ++LIT+Y KC + +A ++F+ M R+V
Sbjct: 265 LNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDV 324
Query: 202 VSWTAIIAAFAQ-----EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+SW+A+IA +AQ + +D +L MR + PN TF SIL ACT GAL QGR
Sbjct: 325 ISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGR 384
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK---------------- 300
H + ++GF + ++ +MY KCG++ EA VF+ M K
Sbjct: 385 QIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCG 444
Query: 301 ---------------DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++VSWN MIAGYAQ+G V+ +L M + +PD +T + ++
Sbjct: 445 DLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILE 504
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
+C +E GK+ K GL+ + + ++ + + G + EAR +M + V
Sbjct: 505 ACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDTV 563
Query: 406 IWEA 409
W A
Sbjct: 564 AWNA 567
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 19/253 (7%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++L +++ L N T+ ++ C + G+ H Q +G I + NSLI+
Sbjct: 41 IQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINF 100
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K +V A VF M +D+V+W+SMIA YA + +A D FE M ++P+ ITF
Sbjct: 101 YSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITF 160
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
L ++ +C + ++E+G+ + G++ ++ + ++ + + G + A + +M
Sbjct: 161 LSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMT- 219
Query: 401 YPNAVIWEA-----AESRLLLEP-------------ECAATHVQLANLYAGVRCWDQAAR 442
N V W A A+ R L E A T V L N ++ R
Sbjct: 220 ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRR 279
Query: 443 VRKLMKDKGLKTN 455
+ + ++GL+T+
Sbjct: 280 IHSHISERGLETD 292
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 106/216 (49%), Gaps = 13/216 (6%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+ K+ + + E + D + T + +CG+ + G A++ G ++ V +
Sbjct: 476 DIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVAT 535
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SLI +YSKC + +A VF++M R+ V+W A++A + Q ++L++ M + P
Sbjct: 536 SLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSP 595
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRM-----GFFSYIQVANSLISMYCKCGNVEE 289
N+ T T+++SAC+ +G + +GR + RM Q ++ + + G ++E
Sbjct: 596 NEITLTAVISACSRAGLVQEGR----EIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQE 651
Query: 290 AVYVFNNMHGK-DIVSWNSMIAGYAQHG---LAVRA 321
A +M + DI W++++ H LA RA
Sbjct: 652 AEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERA 687
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 242/434 (55%), Gaps = 31/434 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGS 147
+ VF+ + + +V L+S +D + E K + + + SC S
Sbjct: 206 GNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSS 265
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+ G I+ + +VG++L+ +Y+K R + DA F+ + R++ SWT I
Sbjct: 266 LLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVI 325
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ +AQ Q + ++ +R M+ ++PN++T S LS C+ L GR H ++ G
Sbjct: 326 ISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGH 385
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
F I V ++L+ +Y KCG +E A +F + +DIVSWN++I+GY+QHG +A++ F
Sbjct: 386 FGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRM 445
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
M+ + + PD TF+GV+S+C GLVEEGK FDSM+K +G+ P ++HY+C+VD+LGRAG
Sbjct: 446 MLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAG 505
Query: 387 LLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLAN 429
E + FI++M + P ++IWE AA+ +EP ++++ L+N
Sbjct: 506 KFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSN 565
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
++A WD +R LM +G+K PGCSW+E+ V+ F ++D S+ ++ EI LD
Sbjct: 566 IFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDK 625
Query: 490 LVDQMKTLGYVPEV 503
L + ++GYVP+
Sbjct: 626 LGQSLMSIGYVPKT 639
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 143/277 (51%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D +K++ + + K LST + C +T ++R G LA+R+G + ++G
Sbjct: 31 DGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGC 90
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL+ +YSKC + DA KVF ++ +VV+W+A+I Q+ EL+ +MR P
Sbjct: 91 SLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARP 150
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N FT +S++S T G L G+S H + GF S V+N LI MY K VE+ VF
Sbjct: 151 NQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVF 210
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M D+VSWN++++G+ R +F +M+ + KP+ TF+ V+ SC E
Sbjct: 211 EAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPE 270
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
GK + K+ + + +VD+ +A LE+A
Sbjct: 271 FGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDA 307
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 115/233 (49%), Gaps = 1/233 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A ++F MP +N VSW A++ +AQ L+L+ M+ + + FT +++L C
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+G+L +G+ H +R G + SL+ MY KCG V +A+ VF + D+V+W++M
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I G Q G A +LF M ++ +P+ T ++S+ + G + G+ + K+G
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECA 421
+ + + ++ + ++ +E+ + M P+ V W A S C
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMT-NPDLVSWNALLSGFYDSQTCG 235
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+E A +F M K+ VSWN+++ GYAQ G + + LF +M + K T V+
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHY-SC-VVDLLGRAGLLEEARDFIKQMPIYPNA 404
C + G + EGKV + G E+D + C +VD+ + G + +A ++ P+
Sbjct: 61 CANTGSLREGKVLHALALRSGC--EIDEFLGCSLVDMYSKCGTVYDALKVFTKIR-NPDV 117
Query: 405 VIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
V W A + L + H Q +AA + LM+ KG + N
Sbjct: 118 VAWSAMITGLDQQ-----GHGQ------------EAAELFHLMRRKGARPN 151
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 227/390 (58%), Gaps = 26/390 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L V S S ++ G +R G+ AN++V ++L+ +Y+K + A VF MP
Sbjct: 186 LKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMP 245
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-----PNDFTFTSILSACTGSGAL 252
+N VSW+A+IA FA+ LEL+++M MLE PN T ++L AC G AL
Sbjct: 246 TKNFVSWSAMIACFAKNEMPMKALELFQLM---MLEAHDSVPNSVTMVNVLQACAGLAAL 302
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
QG+ H +R G S + V N+LI+MY +CG + VF+NM +D+VSWNS+I+ Y
Sbjct: 303 EQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIY 362
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPE 371
HG +AI +FE M+ Q P I+F+ V+ +C H GLVEEGK+ F+SM +K+ + P
Sbjct: 363 GMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPG 422
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------------EAAE--SRLL- 415
++HY+C+VDLLGRA L+EA I+ M P +W E AE S LL
Sbjct: 423 MEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLF 482
Query: 416 -LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
LEP A +V LA++YA + W +A V KL++ +GL+ PGCSWIE+ VY F + D
Sbjct: 483 ELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVD 542
Query: 475 KSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
+ N ++ EI +L L ++MK GYVP+ +
Sbjct: 543 EHNPQIEEIHALLVKLSNEMKAQGYVPQTN 572
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 128/251 (50%), Gaps = 6/251 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC ++ G + +GF + ++ + LI +Y + I A KVF+E R +
Sbjct: 85 ICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTI 144
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS----GALGQGRS 257
W A+ A A L+LY M + + FT+T +L AC S L +G+
Sbjct: 145 YVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKE 204
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R G+ + I V +L+ +Y K G+V A VF M K+ VSW++MIA +A++ +
Sbjct: 205 IHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEM 264
Query: 318 AVRAIDLFEEMMKQRVK--PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
++A++LF+ MM + P+++T + V+ +C +E+GK+ + + GL L
Sbjct: 265 PMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVL 324
Query: 376 SCVVDLLGRAG 386
+ ++ + GR G
Sbjct: 325 NALITMYGRCG 335
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 5/180 (2%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P TF ++ +C +L G H + + GF +A LI+MY + G+++ A V
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL- 352
F+ + I WN++ A G +DL+ +M + D T+ V+ +C L
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195
Query: 353 ---VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+++GK + +HG + + + ++D+ + G + A MP N V W A
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPT-KNFVSWSA 254
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 220/372 (59%), Gaps = 20/372 (5%)
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
++ G +R G+ A+V+V ++L+ +Y++ + A VF+EMPV+NVVSW+A+IA
Sbjct: 190 LQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIAC 249
Query: 211 FAQEWQVDMCLELYR-MMRNSMLE-PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+A+ + LEL+R MM N+ PN T S+L AC AL QG+ H +R G
Sbjct: 250 YAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLD 309
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
S + V ++LI+MY +CG +E +F+ MH KD+V WNS+I+ Y HG +AI +FEEM
Sbjct: 310 SILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEM 369
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGL 387
+ P I+F+ V+ +C H GLVEEGK F+SM K HG++P ++HY+C+VDLLGRA
Sbjct: 370 IDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANR 429
Query: 388 LEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANL 430
L+EA I+ + I P +W E A RL LEP A +V LA++
Sbjct: 430 LDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADI 489
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
YA WD+ RV+KL+ + L+ PG SWIE+ +Y F + D+ N + ++ +L L
Sbjct: 490 YAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNL 549
Query: 491 VDQMKTLGYVPE 502
++MK GY P+
Sbjct: 550 SNEMKQRGYTPQ 561
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 7/256 (2%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
L + GF + ++ + LI ++S+ + +A KVF++ R + W A+ A A + +
Sbjct: 94 LLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGND 153
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGS----GALGQGRSAHCQTIRMGFFSYIQVAN 275
LELY M + + FT+T +L AC S L +G+ H +R G+ +++ V
Sbjct: 154 VLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMT 213
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM--KQRV 333
+L+ MY + G V A VF+ M K++VSW++MIA YA++G A++LF EMM
Sbjct: 214 TLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDS 273
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
P+++T + V+ +C +E+GK+ + + GL L S ++ + R G LE +
Sbjct: 274 VPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQL 333
Query: 394 FIKQMPIYPNAVIWEA 409
+M + V+W +
Sbjct: 334 IFDRMH-KKDVVLWNS 348
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 103/230 (44%), Gaps = 21/230 (9%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHH---------DLHRERLKVDASFLSTAVT------SC 145
+S VFD++ VV +I+ + +L RE + + +VT +C
Sbjct: 228 ASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQAC 287
Query: 146 GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
+ + G +R G + + V S+LIT+Y++C + +F+ M ++VV W
Sbjct: 288 AAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWN 347
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR- 264
++I+++ ++++ M + P+ +F S+L AC+ +G + +G+ ++
Sbjct: 348 SLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKE 407
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH---GKDIVSWNSMIAG 311
G ++ ++ + + ++EA + ++ G + W S++
Sbjct: 408 HGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKV--WGSLLGA 455
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
ILSA +L H + GF +A LI+M+ + V+ A VF+ +
Sbjct: 76 ILSAAR-RNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRT 134
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG----GLVEEGK 357
I WN++ A G ++L+ M V D T+ ++ +C +++GK
Sbjct: 135 IYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGK 194
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +HG + + ++D+ R G + A +MP+ N V W A
Sbjct: 195 EIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPV-KNVVSWSA 245
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 232/384 (60%), Gaps = 19/384 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + C + + G I++G+ ++V +SLIT+Y KC + +A K+F ++P
Sbjct: 252 FASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLP 311
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+VV+WTA++ +AQ D + L+R M+ ++P+ TFTS+L++C+ L +G+
Sbjct: 312 HRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKR 371
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG-YAQHG 316
H Q + G+ + + ++L+SMY KCG++++A VFN M +++V+W ++I G AQHG
Sbjct: 372 IHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHG 431
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHY 375
A++ F++M KQ +KPD +TF V+S+C H GLVEEG+ +F SM +G+KP ++HY
Sbjct: 432 RCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY 491
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEP 418
SC VDLLGRAG LEEA + I MP P +W AAE+ L L+P
Sbjct: 492 SCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDP 551
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
+ +V L+++YA ++ A +VR++M+ + + PG SWIE+ V+ F EDKS+
Sbjct: 552 DDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHP 611
Query: 479 RLSEILPVLDFLVDQMKTLGYVPE 502
+I L L +Q+K +GYVP+
Sbjct: 612 ESEQIYVELGKLTEQIKEMGYVPD 635
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 144/248 (58%), Gaps = 1/248 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ G VG+SL+ +Y+KC I A +F+ +P +NVV+WT +IA +AQ+ QVD+ L
Sbjct: 175 VEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVAL 234
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
EL M+ + + PN TF SIL CT AL G+ H I+ G+ + V NSLI+MY
Sbjct: 235 ELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMY 294
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
CKCG +EEA +F+++ +D+V+W +M+ GYAQ G AI+LF M +Q +KPD +TF
Sbjct: 295 CKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFT 354
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V++SC ++EGK + G ++ S +V + + G +++A QM
Sbjct: 355 SVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS-E 413
Query: 402 PNAVIWEA 409
N V W A
Sbjct: 414 RNVVAWTA 421
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 157/311 (50%), Gaps = 18/311 (5%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C R++ G +++G N Y+ ++L+++Y+KC + DA +VF+ + RN+VSW
Sbjct: 57 CARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSW 116
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
TA+I AF + + Y M+ + +P+ TF S+L+A T L G+ H + +
Sbjct: 117 TAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVE 176
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G +V SL+ MY KCG++ +A +F+ + K++V+W +IAGYAQ G A++L
Sbjct: 177 AGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALEL 236
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
E M + V P+ ITF ++ C +E GK + + G EL + ++ + +
Sbjct: 237 LETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCK 296
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVR 444
G LEEAR +P + + V W A + YA + D+A +
Sbjct: 297 CGGLEEARKLFSDLP-HRDVVTWTA-----------------MVTGYAQLGFHDEAINLF 338
Query: 445 KLMKDKGLKTN 455
+ M+ +G+K +
Sbjct: 339 RRMQQQGIKPD 349
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 119/226 (52%), Gaps = 11/226 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ I++ + ++ +K D ++ +TSC S ++ G + G+ +VY+ S+L
Sbjct: 332 DEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSAL 391
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA-FAQEWQVDMCLELYRMMRNSMLEPN 235
+++Y+KC + DA VF +M RNVV+WTAII AQ + LE + M+ ++P+
Sbjct: 392 VSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPD 451
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRM--GFFSYIQVANSLISMYCKCGNVEEAVYV 293
TFTS+LSACT G + +GR H +++ + G ++ + + + + G++EEA V
Sbjct: 452 KVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENV 510
Query: 294 FNNM---HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
+M G + W ++++ H R E ++K + PD
Sbjct: 511 ILSMPFIPGPSV--WGALLSACRVHSDVERGERAAENVLK--LDPD 552
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F +L C +L QGR H ++ G + N+L+SMY KCG++ +A VF+++
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
++IVSW +MI + + A +E M KPD +TF+ ++++ + L++ G+
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + GL+ E + +V + + G + +AR ++P N V W
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLP-EKNVVTW 217
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 235/416 (56%), Gaps = 18/416 (4%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K +S + R +++ D + + +C R G I++G ++VGS+L+
Sbjct: 443 KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALV 502
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
+YSKC ++ +A K+ + + +VSW AII+ F+ + + + + M +EP++F
Sbjct: 503 DMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNF 562
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T+ ++L C +G G+ H Q I++ S + + ++L+ MY KCGN+ +++ +F
Sbjct: 563 TYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKA 622
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D V+WN+MI G+A HGL A++LFE M+ + +KP+ TF+ V+ +C H G ++G
Sbjct: 623 PKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGL 682
Query: 358 VYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------- 407
YF MA + L+P+L+HYSC+VD+LGR+G +EEA I+ MP +A+IW
Sbjct: 683 FYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKI 742
Query: 408 --------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
+AA S L L+PE ++ + L+N+YA W Q +++R+ M+ LK PGCS
Sbjct: 743 QGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCS 802
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKR 515
WIE+ + V+ F DK++ + I +LD L+ M+ G PE+ +V++ R
Sbjct: 803 WIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPEIDTIQVEEVEENR 858
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 146/284 (51%), Gaps = 1/284 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L + D LS A+++ + G LAI++ +N+ V ++++ +Y KC
Sbjct: 350 LQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGA 409
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+++A +F+EM +R+ VSW AII A Q L + M S +EP++FT+ S+L A
Sbjct: 410 LVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKA 469
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G A G H + I+ G + V ++L+ MY KCG +EEA + + + +VSW
Sbjct: 470 CAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSW 529
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N++I+G++ + + F M++ V+PD T+ V+ +C + V GK M K
Sbjct: 530 NAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIK 589
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L ++ S +VD+ + G + ++ ++ P ++V W A
Sbjct: 590 LELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP-KRDSVTWNA 632
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 186/394 (47%), Gaps = 33/394 (8%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D++K I++ + + D + L+ ++ C + G +A++ GF +V GS
Sbjct: 137 DIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGS 196
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC + D+ VF E+P +N +SW+A IA Q Q+ L+L++ M+ +
Sbjct: 197 ALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGV 256
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ T+ S+ +C G A G HC ++ F S + V + + MY KC N+ +A +F
Sbjct: 257 SQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLF 316
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ + ++ S+N+MI GYA++ +A LF ++ K D ++ G +S+ V
Sbjct: 317 SLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSA----AAVI 372
Query: 355 EGKVYFDSMAKHGL--KPELDHYSCV----VDLLGRAGLLEEARDFIKQM----PIYPNA 404
+G + + + HGL K L CV +D+ G+ G L EA +M P+ NA
Sbjct: 373 KG--HSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNA 430
Query: 405 VI--WEAAES------------RLLLEPECAATHVQLANLYAGVRCWDQAARV--RKLMK 448
+I E ES R +EP+ T+ + AG R + V R +
Sbjct: 431 IITACEQNESEGKTLSHFGAMLRSKMEPD-EFTYGSVLKACAGQRAFSNGMEVHGRIIKS 489
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
GLK G + +++ + +K + RL E
Sbjct: 490 GMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEE 523
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 32/235 (13%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR----- 199
C + R ++ G I +GF V+V + LI +Y KC + AYKVFEEMP R
Sbjct: 34 CSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSW 93
Query: 200 ---------------------------NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
+VVSW ++I+ + Q + + ++ MR+ +
Sbjct: 94 NTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGV 153
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+ T L C+ G H ++MGF + ++L+ MY KC ++E+++
Sbjct: 154 MFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLD 213
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
VF+ + K+ +SW++ IAG Q+ +R + LF+EM ++ + T+ V SC
Sbjct: 214 VFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSC 268
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF+ I C+ AL G+ AH I GF + V N LI MY KC +E A VF M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+DIVSWN+M+ G A G A +F M D +++ +IS G +++
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHH---GDVVSWNSLISGYLQNGDIQKSI 142
Query: 358 VYFDSMAKHGLKPELDHYSCVVDL 381
F M G+ DH + V L
Sbjct: 143 AVFLKMRDLGVM--FDHTTLAVSL 164
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 231/394 (58%), Gaps = 19/394 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
LHRE L +F ++ + +C + + G C I+ G ++V+V ++L+ +Y+KC
Sbjct: 130 LHREVLPNQFTF-ASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGR 188
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ ++ ++F E P RN V+W +I Q + L L+ M ++ + T++S L A
Sbjct: 189 MENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRA 248
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C AL G H T++ F I V N+LI MY KCG++++A VF+ M+ +D VSW
Sbjct: 249 CASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSW 308
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI+GY+ HGL A+ +F++M + VKPD +TF+GV+S+C + GL+++G+ YF SM +
Sbjct: 309 NAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQ 368
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------------- 409
HG++P ++HY+C+V LLGR G L++A I ++P P+ ++W A
Sbjct: 369 DHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGR 428
Query: 410 --AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
A+ L +EP+ ATHV L+N+YA + WD A VRK MK KG+K PG SWIE V
Sbjct: 429 ISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTV 488
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
+ F D S+ + I +L++L + K GY+P
Sbjct: 489 HSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIP 522
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 140/272 (51%), Gaps = 5/272 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ A+ C G C ++ G +++ + L+ +Y K + DA K+F+EMP
Sbjct: 42 ANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPE 101
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
RN +S+ +I +A+ + +EL+ + +L PN FTF S+L AC L G
Sbjct: 102 RNTISFVTLIQGYAESVRFLEAIELFVRLHREVL-PNQFTFASVLQACATMEGLNLGNQI 160
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
HC I++G S + V+N+L+ +Y KCG +E ++ +F ++ V+WN++I G+ Q G
Sbjct: 161 HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDG 220
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+A+ LF M++ RV+ +T+ + +C +E G K ++ + +
Sbjct: 221 EKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNAL 280
Query: 379 VDLLGRAGLLEEAR---DFI-KQMPIYPNAVI 406
+D+ + G +++AR D + KQ + NA+I
Sbjct: 281 IDMYAKCGSIKDARLVFDLMNKQDEVSWNAMI 312
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 105/203 (51%), Gaps = 2/203 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D EK + + ++ R++ S+A+ +C S + G L ++T F ++ V +
Sbjct: 219 DGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTN 278
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+LI +Y+KC I DA VF+ M ++ VSW A+I+ ++ L ++ M+ + ++P
Sbjct: 279 ALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKP 338
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ TF +LSAC +G L QG++ I+ G I+ ++ + + G++++AV +
Sbjct: 339 DKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKL 398
Query: 294 FNNMHGK-DIVSWNSMIAGYAQH 315
+ + + ++ W +++ H
Sbjct: 399 IDEIPFQPSVMVWRALLGACVIH 421
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
E N + + L C +G+ HC+ ++ G + N L++MY K + +A
Sbjct: 35 EFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASK 94
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F+ M ++ +S+ ++I GYA+ + AI+LF + ++ V P+ TF V+ +C
Sbjct: 95 LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEG 153
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ G + K GL ++ + ++D+ + G +E + + + P + N V W
Sbjct: 154 LNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESP-HRNDVTW 207
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 247/417 (59%), Gaps = 19/417 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ ++ + + D ++A+++C + + G A +G+ ++ VG++L++L
Sbjct: 559 LNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSL 618
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y++C + DAY F+++ ++ +SW ++I+ FAQ + L L+ M + E N FTF
Sbjct: 619 YARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTF 678
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+SA + G+ H I+ G S +V+N LI++Y KCGN+++A F M
Sbjct: 679 GPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPE 738
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K+ +SWN+M+ GY+QHG +A+ LFE+M + V P+ +TF+GV+S+C H GLV+EG Y
Sbjct: 739 KNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKY 798
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV------------- 405
F SM + HGL P+ +HY+CVVDLLGR+GLL AR F+++MPI P+A+
Sbjct: 799 FQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHK 858
Query: 406 ---IWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
I E A S LL LEP+ +AT+V L+N+YA W R R++MKD+G+K PG SWI
Sbjct: 859 NIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWI 918
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEP 518
E+ N V+ F A D+ + + +I L L + GY+P+ + ++DA ++ P
Sbjct: 919 EVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTN-SLLNDAERRQKGP 974
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 145/266 (54%), Gaps = 1/266 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C S R + G ++TGF NVYV S LI +Y+K + A K+F + ++VVS
Sbjct: 482 TCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVS 541
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA+IA +AQ + L L++ M++ + ++ F S +SAC G AL QG+ H Q
Sbjct: 542 WTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQAC 601
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + V N+L+S+Y +CG V +A + F+ + KD +SWNS+I+G+AQ G A+
Sbjct: 602 VSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALS 661
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
LF +M K + ++ TF +S+ + V+ GK + K G E + + ++ L
Sbjct: 662 LFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYA 721
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G +++A +MP N + W A
Sbjct: 722 KCGNIDDAERQFFEMP-EKNEISWNA 746
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 135/261 (51%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
LK D +++ +++C S + G + AI+ G +++ + +L+ LY KC I A+
Sbjct: 368 LKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAH 427
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+ F NVV W ++ A+ ++ +++ M+ +EPN FT+ SIL C+
Sbjct: 428 EFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLR 487
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
A+ G H Q ++ GF + V++ LI MY K G ++ A+ +F + KD+VSW +MIA
Sbjct: 488 AVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIA 547
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GYAQH A++LF+EM Q + D I F IS+C + +G+ G
Sbjct: 548 GYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSD 607
Query: 371 ELDHYSCVVDLLGRAGLLEEA 391
+L + +V L R G + +A
Sbjct: 608 DLSVGNALVSLYARCGKVRDA 628
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 150/296 (50%), Gaps = 12/296 (4%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCL------AIRTGFIANVY 171
+++ + + +E++K D + + CG G P+ C+ I G+ +++
Sbjct: 152 RVLGLFRRMLQEKVKPDERTYAGVLRGCGG-----GDVPFHCVEKIHARTITHGYENSLF 206
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
V + LI LY K + A KVF+ + R+ VSW A+++ +Q + + L+ M S
Sbjct: 207 VCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSG 266
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P + F+S+LSACT G H ++ GF V N+L+++Y + GN A
Sbjct: 267 VYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAE 326
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VFN M +D VS+NS+I+G +Q G + +A++LF++M +KPD +T ++S+C G
Sbjct: 327 QVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVG 386
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ GK + K G+ ++ ++DL + ++ A +F N V+W
Sbjct: 387 ALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTET-ENVVLW 441
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 167/357 (46%), Gaps = 26/357 (7%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + +H + S+ +++C + G L ++ GF YV ++L
Sbjct: 253 EEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNAL 312
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+TLYS+ I A +VF M R+ VS+ ++I+ +Q+ D LEL++ M L+P+
Sbjct: 313 VTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDC 372
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T S+LSAC+ GAL G+ H I+ G S I + +L+ +Y KC +++ A F +
Sbjct: 373 VTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLS 432
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+++V WN M+ Y + +F +M + ++P+ T+ ++ +C V+ G
Sbjct: 433 TETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLG 492
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ + K G + + S ++D+ + G L+ A +++ + V W A +
Sbjct: 493 EQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGY-- 549
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN--------PGCSWIEIMN 465
A H + A +A + K M+D+G+ ++ C+ I+ +N
Sbjct: 550 -----AQHEKFA----------EALNLFKEMQDQGIHSDNIGFASAISACAGIQALN 591
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ GF A V + L+ LY + A VF+EMPVR + W ++ F L
Sbjct: 95 LKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVL 154
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGA-LGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L+R M ++P++ T+ +L C G H +TI G+ + + V N LI +
Sbjct: 155 GLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDL 214
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G + A VF+ + +D VSW +M++G +Q G A+ LF +M V P F
Sbjct: 215 YFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIF 274
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
V+S+C + G+ + K G E + +V L R G A M
Sbjct: 275 SSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAM 332
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 18/247 (7%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
S++ + R ++ + F++ N TA+ A++ + + +M +
Sbjct: 11 SIVNKIKQFRPVVSIFFFFQKFLEHN----TALSYAYSNDEGEANGINFLHLMEERGVRA 66
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T+ +L C SG G H + ++MGF + + + L+ +Y G+++ AV VF
Sbjct: 67 NSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVF 126
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M + + WN ++ + +A R + LF M++++VKPD T+ GV+ C GG
Sbjct: 127 DEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGC--GG--- 181
Query: 355 EGKVYFDSMAK-------HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G V F + K HG + L + ++DL + G L A+ + ++V W
Sbjct: 182 -GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQ-KRDSVSW 239
Query: 408 EAAESRL 414
A S L
Sbjct: 240 VAMLSGL 246
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 232/445 (52%), Gaps = 60/445 (13%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC-- 183
+H E DA+ +S A+++ G ++ G ++ G + V ++LI +Y KC
Sbjct: 147 MHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGR 206
Query: 184 -----RV------------------------IIDAYKVFEEMPVR----NVVSWTAIIAA 210
RV + +A ++F E R NVVSWT+I+A
Sbjct: 207 ADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVAC 266
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
Q + ++L+R M++ +EPN T +L A AL GRSAHC ++R GF
Sbjct: 267 CVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHD 326
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
I V ++L+ MY KCG V +A +F M +++VSWN+MI GYA HG A A+ LF M
Sbjct: 327 IYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQS 386
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLE 389
+ KPD +TF V+ +C G EEG+ YF+ M KHG+ P ++HY+C+V LLGRAG L+
Sbjct: 387 SKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLD 446
Query: 390 EARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYA 432
+A D I QMP P+ IW AAE+ LEPE A +V L+N+YA
Sbjct: 447 DAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYA 506
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
+ WD R+R +MK GLK GCSWIEI N V+ A D S+ ++ I L L
Sbjct: 507 SKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTM 566
Query: 493 QMKTLGYVP-------EVHEEKVDD 510
+M+ LG+ P +V E++ DD
Sbjct: 567 EMRRLGFAPSTDYVLHDVEEQEKDD 591
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 123/315 (39%), Gaps = 71/315 (22%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
G + +V SSL+ Y + DA V + MP R VV W+A+IAA A + L
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSG-----------------------------ALGQ- 254
MR+ +EPN T+ ++S SG A+G
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169
Query: 255 -----GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
G H ++ G VA +LI MY KCG +E V VF+ D+ S N+++
Sbjct: 170 GDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALV 229
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
AG +++ A+ LF E + + ++ + +++ +++ C G E F M G++
Sbjct: 230 AGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIE 289
Query: 370 PELDHYSCV-----------------------------------VDLLGRAGLLEEARDF 394
P CV VD+ + G + +AR
Sbjct: 290 PNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMI 349
Query: 395 IKQMPIYPNAVIWEA 409
+ MP Y N V W A
Sbjct: 350 FEAMP-YRNVVSWNA 363
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 252/460 (54%), Gaps = 35/460 (7%)
Query: 78 TDSKHLDSQKFNHD-----FTGTNSTFGSSNVFDQLLDTPVVDV----------EKLISM 122
T +L+S +F + + +N + VFD + + V+ EKL
Sbjct: 265 TIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEA 324
Query: 123 HHDLHRERLKVDASFLSTAVTSCGSTRNIRG---GAPYQCLAIRTGFIANVYVGSSLITL 179
H R+++ L T V+ G + ++ L I+ G +++ GS+LI +
Sbjct: 325 LELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDV 384
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSKC + DA VFEEM +++V W A+ + Q + + L+LY ++ S +PN+FTF
Sbjct: 385 YSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTF 444
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
++++A + +L G+ H Q ++MG V N+L+ MY KCG++EEA +FN+
Sbjct: 445 AALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIW 504
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+V WNSMI+ +AQHG A A+ +F EMMK+ ++P+ +TF+ V+S+C H G VE+G +
Sbjct: 505 RDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNH 564
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----------- 408
F+SM G+KP +HY+CVV LLGR+G L EA++FI++MPI P A++W
Sbjct: 565 FNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGN 624
Query: 409 ------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIE 462
AAE + +P+ + +++ L+N++A W +VR M + PG SWIE
Sbjct: 625 VELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIE 684
Query: 463 IMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ N V F A ++ I VLD L+ +K GYVP+
Sbjct: 685 VNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAGYVPD 724
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 161/331 (48%), Gaps = 14/331 (4%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFL 138
+T N +FDQ++ ++ +IS + +++R K D
Sbjct: 183 YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFAC 242
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ +TSCGS + G I+ +N +V + LI +Y+K ++ DA KVF+ M
Sbjct: 243 TSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAE 302
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+NV+S+ A+I ++ + ++ LEL+ MR + P+ TF S+L AL +
Sbjct: 303 QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQI 362
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H I+ G + ++LI +Y KC V++A +VF M+ KDIV WN+M GY QH
Sbjct: 363 HGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLEN 422
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A+ L+ + R KP+ TF +I++ + + G+ + + + K GL + +
Sbjct: 423 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 482
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
VD+ + G +EEAR I+ + V W +
Sbjct: 483 VDMYAKCGSIEEARKMFNS-SIWRDVVCWNS 512
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 176/367 (47%), Gaps = 20/367 (5%)
Query: 117 EKLISMHHDLHRERLKVDASF-LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
E+ + + DL R+ + F L++ + +C + GA +R+GF +VYVG+S
Sbjct: 18 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI YSK I A VF+++ + V+WT IIA + + + + LEL+ MR + + P+
Sbjct: 78 LIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPD 137
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+ +S+LSAC+ L G+ H +R G + V N LI Y KC V+ +F+
Sbjct: 138 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M K+I+SW +MI+GY Q+ A+ LF EM + KPD V++SC +E+
Sbjct: 198 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQ 257
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAA- 410
G+ K L+ + ++D+ ++ LL +A+ M I NA+I +
Sbjct: 258 GRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSS 317
Query: 411 ------------ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN--P 456
E R+ L P T V L + A + + + ++ L+ G+ +
Sbjct: 318 QEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFA 377
Query: 457 GCSWIEI 463
G + I++
Sbjct: 378 GSALIDV 384
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 214/349 (61%), Gaps = 19/349 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSML 232
+++++ Y ++ A + FE MPVRN+VSW A++A + + D L L+R M+R + +
Sbjct: 227 TAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANV 286
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+PN T +S+L C+ ALG G+ H +++ + V SL+SMYCKCG++ A
Sbjct: 287 QPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACK 346
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F MH +D+V+WN+MI+GYAQHG AI+LFE M + V+P+ ITF+ V+++C H GL
Sbjct: 347 LFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 406
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP------------ 399
+ G F+ M + +G++P +DHYSC+VDLL RAG LE A D I+ MP
Sbjct: 407 CDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLL 466
Query: 400 ----IYPNAVIWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
+Y N E A +L+ +P+ A +VQLAN+YAG WD +RVR+ MKD +
Sbjct: 467 AACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVK 526
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
PG SWIEI V++ FR+ D+ + +L I L L ++MK +GYVP++
Sbjct: 527 TPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDL 575
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ +AS LS+ + C + + G ++ N+ VG+SL+++Y KC + A
Sbjct: 286 VQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSAC 345
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F EM R+VV+W A+I+ +AQ + L+ M++ +EPN TF ++L+AC +G
Sbjct: 346 KLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 405
Query: 251 ALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
G R G + + ++ + C+ G +E AV + +M
Sbjct: 406 LCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSM 453
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH-GLAVRAIDLFEEMMKQRVKPDAITFLGV 343
G++ A F + K ++N ++AGYA+ G A LF+ + PDA+++ +
Sbjct: 80 GDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRI----PTPDAVSYNTL 135
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
+S G + + F SM ++ ++ +V L ++G +EEA+ MP+ N
Sbjct: 136 LSCHFASGDADGARRLFASMPVR----DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR-N 190
Query: 404 AVIWEA 409
+V W A
Sbjct: 191 SVSWNA 196
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N+L+S + G+ + A +F +M +D+VSWN+M++G ++ G A +F M +
Sbjct: 133 NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR--- 189
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
+++++ ++S + + +F + + G + ++ +V G + +A ++
Sbjct: 190 -NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEY 245
Query: 395 IKQMPIYPNAVIWEA 409
+ MP+ N V W A
Sbjct: 246 FEAMPVR-NLVSWNA 259
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 228/410 (55%), Gaps = 20/410 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S+ + +E ++ + L+ + S S I LA + GF+++ +V + LI
Sbjct: 391 LSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDS 450
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + A KVFEE N++++T++I A +Q + ++L+ M LEP+ F
Sbjct: 451 YWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVL 510
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S+L+AC A QG+ H I+ F + + N+L+ Y KCG++E+A F+ +
Sbjct: 511 SSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPD 570
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K +VSW++MI G AQHG RA+D+F M+ +R+ P+ IT V+ +C H GLV+E K Y
Sbjct: 571 KGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGY 630
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
F SM + G+ +HYSC++DLLGRAG L++A + + MP NA +W
Sbjct: 631 FSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHR 690
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AAE +LEPE + THV LAN YA WD+ A+VRKLMKD +K P SW+
Sbjct: 691 DPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWV 750
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP--EVHEEKVD 509
E+ + V+ F DKS+ R +I L+ L D M GYVP EV VD
Sbjct: 751 ELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVD 800
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAIIAAFA 212
G +A+ TG +++V ++L+ +Y + +A +VF+E RN VSW +++AF
Sbjct: 119 GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFV 178
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + +EL+ M S + PN+F F+ +++ACTGS L GR H +R G+ +
Sbjct: 179 KNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVF 238
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
AN+L+ MY K G++ A VF + D+VSWN+ I+G HG A++L +M
Sbjct: 239 TANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK----PELDHYSCV--VDLLGRAG 386
+ P+ T +SS + HG + D Y V VD+ + G
Sbjct: 299 LVPNVFT----LSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYG 354
Query: 387 LLEEARDFIKQMPIYPNAVIWEA 409
LL++AR + +P + ++W A
Sbjct: 355 LLDDARKVFEWIP-RKDLLLWNA 376
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 133/273 (48%), Gaps = 7/273 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S +T +T+++ GA +++G + + L++ YSKCR+ A +VF+E P
Sbjct: 7 ISPLLTRYAATQSLFLGAHIHAHLLKSGLLHAFR--NHLLSFYSKCRLPGSARRVFDETP 64
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
VSW++++ A++ L +R MR + N+F +L + G G
Sbjct: 65 DPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDA---GLGVQ 121
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN-MHGKDIVSWNSMIAGYAQHG 316
H + G I VAN+L++MY G V+EA VF+ ++ VSWN M++ + ++
Sbjct: 122 VHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKND 181
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
A++LF EM+ V+P+ F V+++C +E G+ + + G ++ +
Sbjct: 182 RCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTAN 241
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+VD+ + G + A ++P + V W A
Sbjct: 242 ALVDMYSKLGDIHMAALVFGKVP-KTDVVSWNA 273
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 2/211 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S V +C +R++ G + +RTG+ +V+ ++L+ +YSK I A VF ++P
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVP 264
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC--TGSGALGQG 255
+VVSW A I+ LEL M++S L PN FT +SIL AC G+GA G
Sbjct: 265 KTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALG 324
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H I+ S + +L+ MY K G +++A VF + KD++ WN++I+G +
Sbjct: 325 RQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHG 384
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
G ++ LF M K+ + T V+ S
Sbjct: 385 GCHGESLSLFCRMRKEGSDINRTTLAAVLKS 415
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
Y+G +L+ +Y+K ++ DA KVFE +P ++++ W A+I+ + L L+ MR
Sbjct: 341 YIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKE 400
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ N T ++L + A+ H ++GF S V N LI Y KC + A
Sbjct: 401 GSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYA 460
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF +I+++ SMI +Q AI LF EM+++ ++PD ++++C
Sbjct: 461 NKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASL 520
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
E+GK + K ++ + +V + G +E+A +P V W A
Sbjct: 521 SAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP-DKGVVSWSA 578
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 2/201 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E I + ++ R+ L+ D LS+ + +C S G I+ F+ +V+ G++L
Sbjct: 489 EDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNAL 548
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ Y+KC I DA F +P + VVSW+A+I AQ L+++R M + + PN
Sbjct: 549 VYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNH 608
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T TS+L AC +G + + + M G + + +I + + G +++A+ + N
Sbjct: 609 ITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 668
Query: 296 NM-HGKDIVSWNSMIAGYAQH 315
+M + W +++A H
Sbjct: 669 SMPFEANAAVWGALLAASRVH 689
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 6/199 (3%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+ + +L+ + +L G H ++ G + N L+S Y KC A VF+
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGLLHAFR--NHLLSFYSKCRLPGSARRVFDET 63
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
VSW+S++ Y+ + L A+ F M + V+ + V+ GL G
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GV 120
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLE 417
GL ++ + +V + G G ++EAR + NAV W S +
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180
Query: 418 PECA-ATHVQLANLYAGVR 435
C+ A + +++GVR
Sbjct: 181 DRCSDAVELFGEMVWSGVR 199
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 245/432 (56%), Gaps = 32/432 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMH----------HDLHRERLKV----DASFLSTAVTSCGSTR 149
+FDQ+LD V +I+ + DL R + + S+ + +C +
Sbjct: 331 IFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLA 390
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+R G A++ GF + V +SLI++Y++ I DA K F+ + +N++S+ +I
Sbjct: 391 ALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVID 450
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
A+A+ + LEL+ + + + + FTF S+LS G +G+G H + I+ G
Sbjct: 451 AYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
V N+LISMY +CGN+E A VF +M ++++SW S+I G+A+HG A +A++LF +M+
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLL 388
++ V+P+ +T++ V+S+C H GLV EG +F SM +HG+ P ++HY+C+VD+LGR+G L
Sbjct: 571 EEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSL 630
Query: 389 EEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLY 431
EA FI MP +A++W AA+ + EP A ++ L+NLY
Sbjct: 631 SEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLY 690
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A WD+ + +RK MK+K L GCSW+E+ N V++F D S+ + +EI L L
Sbjct: 691 ASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLS 750
Query: 492 DQMKTLGYVPEV 503
++K LGYVP +
Sbjct: 751 VKIKKLGYVPNL 762
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 140/265 (52%), Gaps = 4/265 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFE 194
LS +++C + + G AIR G + VG LI +Y+KC V + A K+F+
Sbjct: 274 LSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFD 333
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
++ NV SWTA+I + Q+ D L+L+R M + + PN FTF+S L AC AL
Sbjct: 334 QILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALR 393
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G +++GF S VANSLISMY + G +++A F+ + K+++S+N++I YA
Sbjct: 394 IGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYA 453
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
++ + A++LF E+ Q + A TF ++S G + +G+ + K GLK
Sbjct: 454 KNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++ + R G +E A + M
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDM 538
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 14/265 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRV-IIDAYKVFEE 195
+ A +C + + G ++TG++ ++V VG LI ++ K R ++ A+KVFE+
Sbjct: 171 FAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP RN V+WT +I Q ++L+ M S EP+ FT + ++SAC L G
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLG 290
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKC---GNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+ H Q IR G V LI+MY KC G++ A +F+ + ++ SW +MI GY
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGY 350
Query: 313 AQH-GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Q G A+DLF M+ V P+ TF + +C + + G+ F H +K
Sbjct: 351 VQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF----THAVKLG 406
Query: 372 LDHYSCV----VDLLGRAGLLEEAR 392
+CV + + R+G +++AR
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDAR 431
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 7/242 (2%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEM-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
+SLI+LYSKC A +F+ M R+++SW+A+++ FA L + M +
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKC-GNVEEA 290
PN++ F + AC+ + + G S ++ G+ S + V LI M+ K G++ A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF M ++ V+W MI Q G A AIDLF EM+ +PD T GVIS+C +
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM 284
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA---GLLEEARDFIKQMPIYPNAVIW 407
L+ G+ +HGL + C++++ + G + AR Q+ + N W
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVFSW 343
Query: 408 EA 409
A
Sbjct: 344 TA 345
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
NSLIS+Y KCG E+A +F M +D++SW++M++ +A + + RA+ F +M++
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG-LKPELDHYSCVVDLL--GRAGLLEE 390
P+ F +C V G F + K G L+ ++ ++D+ GR L+
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 391 ARDFIKQMPIYPNAVIWEAAESRLL 415
+ F ++MP NAV W +RL+
Sbjct: 225 FKVF-EKMP-ERNAVTWTLMITRLM 247
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 214/349 (61%), Gaps = 19/349 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSML 232
+++++ Y ++ A + FE MPVRN+VSW A++A + + D L L+R M+R + +
Sbjct: 178 TAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANV 237
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+PN T +S+L C+ ALG G+ H +++ + V SL+SMYCKCG++ A
Sbjct: 238 QPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACK 297
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F MH +D+V+WN+MI+GYAQHG AI+LFE M + V+P+ ITF+ V+++C H GL
Sbjct: 298 LFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 357
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP------------ 399
+ G F+ M + +G++P +DHYSC+VDLL RAG LE A D I+ MP
Sbjct: 358 CDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLL 417
Query: 400 ----IYPNAVIWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
+Y N E A +L+ +P+ A +VQLAN+YAG WD +RVR+ MKD +
Sbjct: 418 AACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVK 477
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
PG SWIEI V++ FR+ D+ + +L I L L ++MK +GYVP++
Sbjct: 478 TPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDL 526
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ +AS LS+ + C + + G ++ N+ VG+SL+++Y KC + A
Sbjct: 237 VQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSAC 296
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F EM R+VV+W A+I+ +AQ + L+ M++ +EPN TF ++L+AC +G
Sbjct: 297 KLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 356
Query: 251 ALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
G R G + + ++ + C+ G +E AV + +M
Sbjct: 357 LCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSM 404
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH-GLAVRAIDLFEEMMKQRVKPDAITFLGV 343
G++ A F + K ++N ++AGYA+ G A LF+ + PDA+++ +
Sbjct: 31 GDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRI----PTPDAVSYNTL 86
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
+S G + + F SM ++ ++ +V L ++G +EEA+ MP+ N
Sbjct: 87 LSCHFASGDADGARRLFASMPVR----DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR-N 141
Query: 404 AVIWEA 409
+V W A
Sbjct: 142 SVSWNA 147
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
N+L+S + G+ + A +F +M +D+VSWN+M++G ++ G A +F M
Sbjct: 84 NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAM 137
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 248/423 (58%), Gaps = 23/423 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + ++ ++ L VD L++ +T+ + +++ GG + I++G+ N +VGS LI
Sbjct: 223 KALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLI 282
Query: 178 TLYSKCR-VIIDAYKVFEEMPVRNVVSWTAIIAAFA-QEWQVDMCLELYRMMRNSMLEPN 235
LYSKC ++D KVF+E+ ++V W +I+ ++ E D LE +R ++ P+
Sbjct: 283 DLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPD 342
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYVF 294
D + ++SAC+ + QGR H +++ S I V N+LI+MY KCGN+ +A +F
Sbjct: 343 DCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLF 402
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M + VS+NSMIAGYAQHG+ +++ LF+ M++ P ITF+ V+++C H G VE
Sbjct: 403 DTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVE 462
Query: 355 EGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---- 409
+GK+YF+ M K G++PE H+SC++DLLGRAG L EA I+ +P P W A
Sbjct: 463 DGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGA 522
Query: 410 ------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A +RLL L+P AA +V LAN+Y+ AA VRKLM+D+G+K P
Sbjct: 523 CRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKP 582
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKV--DDASHK 514
GCSWIE+ ++ F AED + + +I L+ ++ ++K +GY PEV V DD +
Sbjct: 583 GCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQ 642
Query: 515 RTE 517
R E
Sbjct: 643 REE 645
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR----------------- 184
+ +C + R++R G L I++ + Y+ + + LYSKCR
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 185 ----VIIDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
+I AY ++F+EMP + VS+ +IAA+A+ +L+ MR +
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
L+ + FT + I++AC + +G R H ++ G SY+ V N+LI+ Y K G ++EA
Sbjct: 135 FLDMDGFTLSGIITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192
Query: 291 VYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
+F+ + +D VSWNSM+ Y QH +A++L+ EM + + D T V+++ +
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTN 252
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR-AGLLEEARDFIKQMPIYPNAVIW 407
+ G + + K G S ++DL + G + + R ++ P+ V+W
Sbjct: 253 VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEIS-NPDLVLW 310
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 214/349 (61%), Gaps = 19/349 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSML 232
+++++ Y ++ A + FE MPVRN+VSW A++A + + D L L+R M+R + +
Sbjct: 178 TAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANV 237
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+PN T +S+L C+ ALG G+ H +++ + V SL+SMYCKCG++ A
Sbjct: 238 QPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACK 297
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F MH +D+V+WN+MI+GYAQHG AI+LFE M + V+P+ ITF+ V+++C H GL
Sbjct: 298 LFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 357
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP------------ 399
+ G F+ M + +G++P +DHYSC+VDLL RAG LE A D I+ MP
Sbjct: 358 CDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLL 417
Query: 400 ----IYPNAVIWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
+Y N E A +L+ +P+ A +VQLAN+YAG WD +RVR+ MKD +
Sbjct: 418 AACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVK 477
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
PG SWIEI V++ FR+ D+ + +L I L L ++MK +GYVP++
Sbjct: 478 TPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDL 526
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ +AS LS+ + C + + G ++ N+ VG+SL+++Y KC + A
Sbjct: 237 VQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSAC 296
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F EM R+VV+W A+I+ +AQ + L+ M++ +EPN TF ++L+AC +G
Sbjct: 297 KLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 356
Query: 251 ALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
G R G + + ++ + C+ G +E AV + +M
Sbjct: 357 LCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSM 404
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH-GLAVRAIDLFEEMMKQRVKPDAITFLGV 343
G++ A F + K ++N ++AGYA+ G A LF+ + PDA+++ +
Sbjct: 31 GDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRI----PTPDAVSYNTL 86
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
+S G + + F SM ++ ++ +V L ++G +EEA+ MP+ N
Sbjct: 87 LSCHFASGDADGARRLFASMPVR----DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR-N 141
Query: 404 AVIWEA 409
+V W A
Sbjct: 142 SVSWNA 147
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
N+L+S + G+ + A +F +M +D+VSWN+M++G ++ G A +F M
Sbjct: 84 NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAM 137
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 249/430 (57%), Gaps = 31/430 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFLSTAVTSCGSTRN 150
+ +L + VV +I+ + HD+ E L++ D ++A+++C R
Sbjct: 520 ILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRA 579
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+R G + GF A++ + ++LI+LY++C I +AY FE++ +N +SW ++++
Sbjct: 580 LRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSG 639
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
AQ + L+++ M + E N FT+ S +SA + QG+ H ++ G+ S
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSE 699
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+V+NSLIS+Y K G++ +A FN+M ++++SWN+MI GY+QHG + A+ LFEEM
Sbjct: 700 REVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKV 759
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
+ P+ +TF+GV+S+C H GLV+EG YF+SM K H L P+ +HY CVVDLLGRAG L+
Sbjct: 760 CGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLD 819
Query: 390 EARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYA 432
A ++IK+MPI +A+IW AA L LEPE +AT+V ++N+YA
Sbjct: 820 RAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYA 879
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
R W RKLMKD G+K PG SWIE+ N V+ F A DK + ++I + L
Sbjct: 880 VSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNR 939
Query: 493 QMKTLGYVPE 502
+ +GYV +
Sbjct: 940 RTSEIGYVQD 949
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 139/275 (50%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + + + R+ LK D +++ +++C S + G AI+ G A++ + SL
Sbjct: 344 DRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSL 403
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LYSKC + A+K F N+V W ++ A+ Q + E++R M+ + PN
Sbjct: 404 LDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQ 463
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ SIL CT GAL G H I+ GF + V + LI MY K G + A+ +
Sbjct: 464 FTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRR 523
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ D+VSW +MIAGY QH + A+ LFEEM + ++ D I F IS+C + +G
Sbjct: 524 LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQG 583
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ G +L + ++ L R G ++EA
Sbjct: 584 QQIHAQSYAAGFGADLSINNALISLYARCGRIQEA 618
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 146/293 (49%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I + D+H + LS+ +++ + G CL I+ GF + YV + L
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LYS+ R +I A ++F M R+ VS+ ++I+ Q+ D LEL+ M+ L+P+
Sbjct: 303 VALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDC 362
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T S+LSAC GAL +G H I+ G + I + SL+ +Y KC +VE A F
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLX 422
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
++IV WN M+ Y Q + ++F +M + + P+ T+ ++ +C G + G
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + K G + + S ++D+ + G L A ++++P + V W A
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTA 534
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 137/266 (51%), Gaps = 1/266 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C S + G I+TGF NVYV S LI +Y+K + A ++ +P +VVS
Sbjct: 472 TCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS 531
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA+IA + Q L+L+ M ++ ++ F S +SAC G AL QG+ H Q+
Sbjct: 532 WTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSY 591
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
GF + + + N+LIS+Y +CG ++EA F + K+ +SWNS+++G AQ G A+
Sbjct: 592 AAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQ 651
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F M++ + + T+ IS+ +++G+ + K G E + + ++ L
Sbjct: 652 VFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYA 711
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
++G + +A M N + W A
Sbjct: 712 KSGSISDAWREFNDMS-ERNVISWNA 736
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
GF ++ V + LI LYSK I A KVF + ++++V+W A+I+ +Q + + L+
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M S + P + +S+LSA T G HC I+ GF S V N L+++Y +
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
+ A +F+ M+ +D VS+NS+I+G Q G + RA++LF +M + +KPD IT ++
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
S+C G + +G K G+ ++ ++DL + +E A F N
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTET-ENI 428
Query: 405 VIW 407
V+W
Sbjct: 429 VLW 431
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 110/245 (44%), Gaps = 7/245 (2%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C ++GF + SL+ Y + A KVF+E R+V SW +I F +
Sbjct: 81 HCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSN 140
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSG-ALGQGRSAHCQTIRMGFFSYIQVANS 276
L+R M + PN +TF +L AC G A + H +T GF S VAN
Sbjct: 141 FQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANL 200
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI +Y K G +E A VFN + KDIV+W +MI+G +Q+GL AI LF +M + P
Sbjct: 201 LIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPT 260
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
V+S+ L E G+ + K G E Y C G L +R I
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET--YVCN----GLVALYSRSRKLIS 314
Query: 397 QMPIY 401
I+
Sbjct: 315 AERIF 319
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 2/195 (1%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++L M + N + +L C SG+L + HC+ + GF + +SL+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y + G+ AV VF+ + + SWN MI + + LF M+ + + P+ TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 341 LGVISSCRHGGLV-EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
GV+ +C G + K +G + ++DL + G +E A+ +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222
Query: 400 IYPNAVIWEAAESRL 414
+ + V W A S L
Sbjct: 223 M-KDIVTWVAMISGL 236
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 243/434 (55%), Gaps = 34/434 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDLH--RE------RLKVDASF------LSTAVTSCGSTR 149
VFD++ + +V L+S + L RE RL+ ++ F L + + +CG
Sbjct: 174 VFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELG 233
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
++ G + + G N Y+GS+LI++YSKC ++ + ++F+ MP R+ ++W A I+
Sbjct: 234 DLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAIS 293
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
A+AQ D + L+ M+ + ++PN T T++LSAC GAL G+ G
Sbjct: 294 AYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQH 353
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
I VA +LI MY KCG++E A VFN+M K+ SWN+MI+ A HG A A+ LFE M
Sbjct: 354 DIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMS 413
Query: 330 KQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
+ +P+ ITF+ ++S+C H GLV+EG FD M+ GL P+++HYSC+VDLL RAG
Sbjct: 414 DEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAG 473
Query: 387 LLEEARDFIKQMPIYPNAVIWEAAES---------------RLLLE--PECAATHVQLAN 429
L EA D I++MP P+ V A S ++LLE P + ++ +
Sbjct: 474 HLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSK 533
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+Y + WD AAR+R LM++ G+ PGCSWIE+ N + F + D ++ ++D
Sbjct: 534 IYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDL 593
Query: 490 LVDQMKTLGYVPEV 503
L +++K GYVP++
Sbjct: 594 LYEELKKEGYVPKI 607
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 142/273 (52%), Gaps = 4/273 (1%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C + IR C + G + + +S++T+Y +C A KVF+E+ +++VS
Sbjct: 126 ACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVS 185
Query: 204 WTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
W ++++ +A+ +E++ R+ S EP++ + S+L AC G L GR
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+ G + ++LISMY KCG + + +F+ M +D ++WN+ I+ YAQ+G+A AI
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDL 381
LF M + V P+ +T V+S+C G ++ GK D A H GL+ ++ + ++D+
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGK-QMDEYATHRGLQHDIFVATALIDM 364
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ G LE A+ MP N W A S L
Sbjct: 365 YAKCGSLESAQRVFNDMP-RKNDASWNAMISAL 396
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 20/261 (7%)
Query: 197 PVRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
P N ++ ++ A W + L LY M+ + PN+FTF + AC +
Sbjct: 77 PHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMA 136
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R AHC+ ++G + NS+++MY +CG A VF+ + KD+VSWNS+++GYA+
Sbjct: 137 RLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKL 196
Query: 316 GLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
G A A+++F + ++ +PD ++ + V+ +C G +E G+ + + G+K
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYI 256
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGV 434
S ++ + + G L +R MP + + W AA S YA
Sbjct: 257 GSALISMYSKCGELVSSRRIFDGMP-SRDFITWNAAISA-----------------YAQN 298
Query: 435 RCWDQAARVRKLMKDKGLKTN 455
D+A + MK+ G+ N
Sbjct: 299 GMADEAISLFHSMKENGVDPN 319
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 232/381 (60%), Gaps = 18/381 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++A+++C + +R G +G+ A+V + ++L+ LY++C +A+ +FE +
Sbjct: 449 LASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE 508
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ ++W +++ FAQ + LE++ M + ++ N FTF S +SA + QG+
Sbjct: 509 HKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQ 568
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ G S +VAN+LIS+Y KCG++E+A F M ++ VSWN++I +QHG
Sbjct: 569 IHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGW 628
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYS 376
+ A+DLF++M ++ +KP+ +TF+GV+++C H GLVEEG YF SM ++HG+ P DHY+
Sbjct: 629 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYA 688
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
CVVD+LGRAG L+ AR F+++MP+ NA++W AA+ L LEP
Sbjct: 689 CVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPH 748
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+A++V L+N YA W VRK+MKD+G++ PG SWIE+ NVV+ F D+ +
Sbjct: 749 DSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL 808
Query: 480 LSEILPVLDFLVDQMKTLGYV 500
+I L L D++ +GY+
Sbjct: 809 AHQIYKYLADLDDRLAKIGYI 829
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 141/249 (56%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C I G L+I+TGF +++YV LI +YSK + A ++ E + ++VVS
Sbjct: 354 TCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVS 413
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT++IA + Q LE ++ M+ + P++ S +SAC G A+ QG+ H +
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVY 473
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + + + N+L+++Y +CG +EA +F + KD ++WN M++G+AQ GL A++
Sbjct: 474 VSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALE 533
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F +M + VK + TF+ IS+ + +++GK ++ K G E + + ++ L G
Sbjct: 534 VFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYG 593
Query: 384 RAGLLEEAR 392
+ G +E+A+
Sbjct: 594 KCGSIEDAK 602
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 138/276 (50%), Gaps = 1/276 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D +++ + +C S ++ G ++ G + + SL+ LY KC VI++A ++F
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ NVV W ++ A+ Q + +L+ M + + PN+FT+ +L CT +G +
Sbjct: 303 KSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEIN 362
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G H +I+ GF S + V+ LI MY K G +++A + + KD+VSW SMIAGY
Sbjct: 363 LGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYV 422
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
QH A++ F++M + PD I IS+C + +G+ + G ++
Sbjct: 423 QHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVS 482
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ +V+L R G +EA + + + + + W
Sbjct: 483 IWNALVNLYARCGRSKEAFSLFEAIE-HKDKITWNG 517
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 152/294 (51%), Gaps = 2/294 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSC-GSTRNIRGGAPYQCLAIRTGFIANVYVG 173
D EKL+S+ R+ + + + A+ C GS ++ AI G + G
Sbjct: 21 DPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAG 80
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+ LI LY+K ++ A +VFE++ R+ VSW A+++ +A+ + + LY M S +
Sbjct: 81 NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P + +S+LSACT + QGR H Q + G S V N+LI++Y + G++ A V
Sbjct: 141 PTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERV 200
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M D V++N++I+ +AQ G A+++FEEM PD +T ++++C G +
Sbjct: 201 FSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDL 260
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+GK + K G+ P+ ++DL + G++ EA + K N V+W
Sbjct: 261 NKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGD-RTNVVLW 313
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 138/280 (49%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++H +H + LS+ +++C G + G + VG++L
Sbjct: 125 EEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNAL 184
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I LY + + A +VF EMP + V++ +I+ AQ + LE++ MR S P+
Sbjct: 185 IALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDC 244
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T S+L+AC G L +G+ H ++ G + SL+ +Y KCG + EA+ +F +
Sbjct: 245 VTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS 304
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
++V WN M+ Y Q ++ DLF +M+ V+P+ T+ ++ +C + G + G
Sbjct: 305 GDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLG 364
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+ K G + ++ ++D+ + G L++AR ++
Sbjct: 365 EQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILE 404
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 13/165 (7%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNI 151
+ G S F S ++++ L+ + +++ +K + +++++ + +I
Sbjct: 515 WNGMVSGFAQSGLYEEALEVFI-----------KMYQAGVKYNVFTFVSSISASANLADI 563
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
+ G I+TG + V ++LI+LY KC I DA F EM RN VSW II +
Sbjct: 564 KQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSC 623
Query: 212 AQE-WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+Q W ++ L+L+ M+ L+PND TF +L+AC+ G + +G
Sbjct: 624 SQHGWGLE-ALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEG 667
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 238/406 (58%), Gaps = 19/406 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D L+ AV++C + ++ G A +GF +++ ++L+TLYS+C I ++Y
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
FE+ + ++W A+++ F Q + L ++ M ++ N+FTF S + A + +
Sbjct: 647 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 706
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ QG+ H + G+ S +V N+LISMY KCG++ +A F + K+ VSWN++I
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLK 369
Y++HG A+D F++M+ V+P+ +T +GV+S+C H GLV++G YF+SM +++GL
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 826
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAES 412
P+ +HY CVVD+L RAGLL A++FI++MPI P+A++W AA
Sbjct: 827 PKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHH 886
Query: 413 RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
L LEPE +AT+V L+NLYA + WD R+ MK+KG+K PG SWIE+ N ++ F
Sbjct: 887 LLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV 946
Query: 473 EDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEP 518
D+++ EI L + +GYV + +++ H++ +P
Sbjct: 947 GDQNHPLADEIHEYFQDLTKRASEIGYVQDCF-SLLNELQHEQKDP 991
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + + +H + L+ D++ L++ V +C + + G + GF +N + +L
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LY+KC I A F E V NVV W ++ A+ + ++R M+ + PN
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+T+ SIL C G L G H Q I+ F V + LI MY K G ++ A +
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
GKD+VSW +MIAGY Q+ +A+ F +M+ + ++ D + +S+C ++EG
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G +L + +V L R G +EE+ +Q N + W A
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNA 662
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 129/268 (48%), Gaps = 1/268 (0%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C ++ G I+T F N YV S LI +Y+K + A+ + ++V
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWT +IA + Q D L +R M + + ++ T+ +SAC G AL +G+ H Q
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
GF S + N+L+++Y +CG +EE+ F D ++WN++++G+ Q G A
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ +F M ++ + + TF + + +++GK + K G E + + ++ +
Sbjct: 677 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISM 736
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + +A ++ N V W A
Sbjct: 737 YAKCGSISDAEKQFLEVST-KNEVSWNA 763
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 133/260 (51%), Gaps = 4/260 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+ +++C ++ G L ++ GF ++ YV ++L++LY +I A +F M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+ V++ +I +Q + +EL++ M LEP+ T S++ AC+ G L +G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H T ++GF S ++ +L+++Y KC ++E A+ F +++V WN M+ Y
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ +F +M + + P+ T+ ++ +C G +E G+ + K +L+ Y C
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF--QLNAYVC 528
Query: 378 --VVDLLGRAGLLEEARDFI 395
++D+ + G L+ A D +
Sbjct: 529 SVLIDMYAKLGKLDTAWDIL 548
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 158/346 (45%), Gaps = 15/346 (4%)
Query: 76 LQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV 133
L DS S+K + +G+ VFD++ + + K+I +L E +
Sbjct: 114 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGL 173
Query: 134 DASFLSTAVTS-----CGSTRNIRGGA-------PYQCLAIRTGFIANVYVGSSLITLYS 181
+S VT G RGG+ + G + V + LI LYS
Sbjct: 174 FVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYS 233
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
+ + A +VF+ + +++ SW A+I+ ++ + L+ M + P + F+S
Sbjct: 234 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 293
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+LSAC +L G H +++GF S V N+L+S+Y GN+ A ++F+NM +D
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
V++N++I G +Q G +A++LF+ M ++PD+ T ++ +C G + G+
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K G +++L + +E A D+ + + N V+W
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV-ENVVLW 458
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 227 MRNSMLEPNDFTFTSILSACTGS-GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
+ N + PN T +L C + G+L +GR H Q +++G S ++ L Y G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++ A VF+ M + I +WN MI A L LF M+ + V P+ TF GV+
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 346 SCRHGGLVEEGKVYFDSMAK-------HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+CR G V FD + + GL+ + ++DL R G ++ AR +
Sbjct: 195 ACRG------GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 399 PIYPNAVIWEAAESRLLLEPECAATHVQL 427
+ ++ W A S L + EC A ++L
Sbjct: 249 RLKDHSS-WVAMISG-LSKNECEAEAIRL 275
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 238/406 (58%), Gaps = 19/406 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D L+ AV++C + ++ G A +GF +++ ++L+TLYS+C I ++Y
Sbjct: 547 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 606
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
FE+ + ++W A+++ F Q + L ++ M ++ N+FTF S + A + +
Sbjct: 607 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 666
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ QG+ H + G+ S +V N+LISMY KCG++ +A F + K+ VSWN++I
Sbjct: 667 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 726
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLK 369
Y++HG A+D F++M+ V+P+ +T +GV+S+C H GLV++G YF+SM +++GL
Sbjct: 727 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 786
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAES 412
P+ +HY CVVD+L RAGLL A++FI++MPI P+A++W AA
Sbjct: 787 PKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHH 846
Query: 413 RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
L LEPE +AT+V L+NLYA + WD R+ MK+KG+K PG SWIE+ N ++ F
Sbjct: 847 LLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV 906
Query: 473 EDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEP 518
D+++ EI L + +GYV + +++ H++ +P
Sbjct: 907 GDQNHPLADEIHEYFQDLTKRASEIGYVQDCF-SLLNELQHEQKDP 951
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + + +H + L+ D++ L++ V +C + + G + GF +N + +L
Sbjct: 331 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 390
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LY+KC I A F E V NVV W ++ A+ + ++R M+ + PN
Sbjct: 391 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 450
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+T+ SIL C G L G H Q I+ F V + LI MY K G ++ A +
Sbjct: 451 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 510
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
GKD+VSW +MIAGY Q+ +A+ F +M+ + ++ D + +S+C ++EG
Sbjct: 511 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 570
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G +L + +V L R G +EE+ +Q N + W A
Sbjct: 571 QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNA 622
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 129/268 (48%), Gaps = 1/268 (0%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C ++ G I+T F N YV S LI +Y+K + A+ + ++V
Sbjct: 457 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 516
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWT +IA + Q D L +R M + + ++ T+ +SAC G AL +G+ H Q
Sbjct: 517 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 576
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
GF S + N+L+++Y +CG +EE+ F D ++WN++++G+ Q G A
Sbjct: 577 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 636
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ +F M ++ + + TF + + +++GK + K G E + + ++ +
Sbjct: 637 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISM 696
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + +A ++ N V W A
Sbjct: 697 YAKCGSISDAEKQFLEVST-KNEVSWNA 723
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 133/260 (51%), Gaps = 4/260 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+ +++C ++ G L ++ GF ++ YV ++L++LY +I A +F M
Sbjct: 251 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 310
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+ V++ +I +Q + +EL++ M LEP+ T S++ AC+ G L +G+
Sbjct: 311 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 370
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H T ++GF S ++ +L+++Y KC ++E A+ F +++V WN M+ Y
Sbjct: 371 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 430
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ +F +M + + P+ T+ ++ +C G +E G+ + K +L+ Y C
Sbjct: 431 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF--QLNAYVC 488
Query: 378 --VVDLLGRAGLLEEARDFI 395
++D+ + G L+ A D +
Sbjct: 489 SVLIDMYAKLGKLDTAWDIL 508
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 158/346 (45%), Gaps = 15/346 (4%)
Query: 76 LQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV 133
L DS S+K + +G+ VFD++ + + K+I +L E +
Sbjct: 74 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGL 133
Query: 134 DASFLSTAVTS-----CGSTRNIRGGA-------PYQCLAIRTGFIANVYVGSSLITLYS 181
+S VT G RGG+ + G + V + LI LYS
Sbjct: 134 FVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYS 193
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
+ + A +VF+ + +++ SW A+I+ ++ + L+ M + P + F+S
Sbjct: 194 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 253
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+LSAC +L G H +++GF S V N+L+S+Y GN+ A ++F+NM +D
Sbjct: 254 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 313
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
V++N++I G +Q G +A++LF+ M ++PD+ T ++ +C G + G+
Sbjct: 314 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 373
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K G +++L + +E A D+ + + N V+W
Sbjct: 374 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV-ENVVLW 418
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 227 MRNSMLEPNDFTFTSILSACTGS-GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
+ N + PN T +L C + G+L +GR H Q +++G S ++ L Y G
Sbjct: 35 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 94
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++ A VF+ M + I +WN MI A L LF M+ + V P+ TF GV+
Sbjct: 95 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 154
Query: 346 SCRHGGLVEEGKVYFDSMAK-------HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+CR G V FD + + GL+ + ++DL R G ++ AR +
Sbjct: 155 ACRG------GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 208
Query: 399 PIYPNAVIWEAAESRLLLEPECAATHVQL 427
+ ++ W A S L + EC A ++L
Sbjct: 209 RLKDHSS-WVAMISG-LSKNECEAEAIRL 235
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 235/402 (58%), Gaps = 18/402 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ ++ +H ++ D + + ++R G +AIR GF + V+V ++L+ +
Sbjct: 125 LELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHM 184
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+ C A+K+FE M RN+V+W ++I +A + + L L+R M +EP+ FT
Sbjct: 185 YAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTM 244
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+LSAC GAL GR AH +++G + N+L+ +Y KCG++ +A VF+ M
Sbjct: 245 VSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEE 304
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K +VSW S+I G A +G A++LF+E+ ++ + P ITF+GV+ +C H G+V+EG Y
Sbjct: 305 KSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDY 364
Query: 360 FDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F M ++G+ P+++HY C+VDLLGRAGL+++A +FI+ MP+ PNAV+W
Sbjct: 365 FKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHG 424
Query: 408 -----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
E A ++LL LEP+ + +V L+NLYA + W +VR+ M +G+K PG S +
Sbjct: 425 HLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLV 484
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
E+ N ++ F D+S+ + EI L + +K GYVP +
Sbjct: 485 ELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHI 526
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 126/243 (51%), Gaps = 2/243 (0%)
Query: 158 QCLAIRTGF-IANVYVGSSLI-TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW 215
+IR G + N +G LI TL S C + A+++F ++ N+ +W +I +A+
Sbjct: 60 HAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESE 119
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
LELYR M S +EP+ T+ +L A + +G H IR GF S + V N
Sbjct: 120 NPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQN 179
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
+L+ MY CG+ E A +F M +++V+WNS+I GYA +G A+ LF EM + V+P
Sbjct: 180 TLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEP 239
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
D T + ++S+C G + G+ M K GL L + ++DL + G + +A
Sbjct: 240 DGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVF 299
Query: 396 KQM 398
+M
Sbjct: 300 DEM 302
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 241/436 (55%), Gaps = 37/436 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGS 147
+ N+FD++ D VV +IS + + + RE ++ + S+ + +C
Sbjct: 70 ARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDG 129
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
N+R ++ G ++V+V S+LI YSK DA VF EM ++V W +I
Sbjct: 130 LLNLR---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSI 186
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I FAQ D L LY+ M+ + + T TS+L ACTG L GR H ++ +
Sbjct: 187 IGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--Y 244
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ + N+L+ MYCKCG++E+A +F M KD++SW++MIAG AQ+G + A+ LFE
Sbjct: 245 DQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFE 304
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRA 385
M + KP+ IT LGV+ +C H GLV +G YF SM +H G+ P +HY C++DLLGRA
Sbjct: 305 AMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRA 364
Query: 386 GLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLA 428
G L+EA I +M P+AV W AA+ L L+P A T++ L+
Sbjct: 365 GKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLS 424
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
N+YA + W+ A VR+ M+ +G+K +PGCSWIE+ V+ F D S+ R+ EI L
Sbjct: 425 NIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELS 484
Query: 489 FLVDQMKTLGYVPEVH 504
L+ ++ LGYVP+ +
Sbjct: 485 QLIQRLMRLGYVPDTN 500
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 9/284 (3%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+HR RL DA S + C ++ G+ ++ ++LI +Y K +
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ +A +F+EMP RNVVSWT +I+A++ L+ +M + PN +T++S+L A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G L R H +++G S + V ++LI Y K G +A+ VFN M D+V W
Sbjct: 127 CDG---LLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
NS+I G+AQ+ + L++ M + D T V+ +C L+E G+ +
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGR----QVHV 239
Query: 366 HGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H LK + D + ++D+ + G LE+A +M + + W
Sbjct: 240 HVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISW 283
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 98/183 (53%), Gaps = 4/183 (2%)
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M + L + T++ ++ C GA+ Q R H G+ + N+LI+MY K G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++EA +F+ M +++VSW +MI+ Y+ L +A+D M+++ V+P+ T+ V+ +
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
C GL+ +++ S+ K GL+ ++ S ++D + G +A + +M I + V+
Sbjct: 127 C--DGLLNLRQLH-GSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLVV 182
Query: 407 WEA 409
W +
Sbjct: 183 WNS 185
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
E M + R+ DAIT+ +I C G V++ ++ + + +G +P+ + ++++ +
Sbjct: 4 MEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVK 63
Query: 385 AGLLEEARDFIKQMPIYPNAVIW 407
GLL+EAR+ +MP N V W
Sbjct: 64 FGLLDEARNLFDEMP-DRNVVSW 85
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/407 (36%), Positives = 227/407 (55%), Gaps = 18/407 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + M ++ L+ D+ LS+ + N+ G AIR G+ A+V++GSSL
Sbjct: 218 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 277
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC + D+ +VF +P + +SW +IIA Q D L+ ++ M + ++PN
Sbjct: 278 IDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNH 337
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+F+SI+ AC L G+ H IR F + +A++L+ MY KCGN+ A ++F+
Sbjct: 338 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDK 397
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M D+VSW +MI GYA HG A AI LF+ M + VKP+ + F+ V+++C H GLV+E
Sbjct: 398 MELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEA 457
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
YF+SM + + + P L+HY+ V DLLGR G LEEA +FI M I P +W
Sbjct: 458 WKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACR 517
Query: 408 --------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
E +L ++P+ +V L+N+Y+ W A ++R M+DKG+K P C
Sbjct: 518 VHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPAC 577
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
SWIEI N V+ F A DKS+ I L L++QM+ GYV + E
Sbjct: 578 SWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTE 624
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 146/305 (47%), Gaps = 30/305 (9%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI--IDAY- 190
D + + + SC +++R G IR G ++Y ++L+ +YSK + ++ Y
Sbjct: 105 DHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYK 164
Query: 191 --------------------------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
KVFE MP R++VSW +I+ AQ + L +
Sbjct: 165 KVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMV 224
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
R M N+ L P+ FT +S+L L +G+ H IR G+ + + + +SLI MY KC
Sbjct: 225 REMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKC 284
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
V+++ VF + D +SWNS+IAG Q+G+ + F++M+ ++KP+ ++F ++
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 344
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C H + GK + + + S +VD+ + G + AR +M +Y +
Sbjct: 345 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY-DM 403
Query: 405 VIWEA 409
V W A
Sbjct: 404 VSWTA 408
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 31/266 (11%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
S+++++YS ++ D+ +F +P ++W +II + L + M S
Sbjct: 43 STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGK 102
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA-- 290
P+ F S+L +CT L G S H IR+G + N+L++MY K ++EE
Sbjct: 103 YPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNT 162
Query: 291 ------------VY---------------VFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
VY VF M +DIVSWN++I+G AQ+G+ A+
Sbjct: 163 YKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALM 222
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+ EM ++PD+ T V+ + +GK ++G ++ S ++D+
Sbjct: 223 MVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYA 282
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++++ +P + + + W +
Sbjct: 283 KCTRVDDSCRVFYMLPQH-DGISWNS 307
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 232/433 (53%), Gaps = 51/433 (11%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M ++H E LK D + +S+ + + G G C I+ G + +V S+LI +
Sbjct: 195 VLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDM 254
Query: 180 YSKCRVIIDAYKVFEEMPV---------------------------------RNVVSWTA 206
Y KC + VF EM NVVSWT+
Sbjct: 255 YGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTS 314
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+IA+ +Q + LEL+R M+ ++PN T +L AC AL G++AHC ++R G
Sbjct: 315 MIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNG 374
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
F+ + V ++LI MY KCG + + F+ M +++VSWNS++AGYA HG AI++FE
Sbjct: 375 IFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFE 434
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRA 385
M + KPD ++F V+S+C GGL EEG YFDSM++ HG++ ++HYSC+V LLGR+
Sbjct: 435 LMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRS 494
Query: 386 GLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLA 428
G LEEA IKQMP P++ +W E A R+ LEP ++ L+
Sbjct: 495 GRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLS 554
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
N+YA W + VR +M+ +GLK NPG SWIEI N V+ A D S+ ++ +I+ L
Sbjct: 555 NIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLA 614
Query: 489 FLVDQMKTLGYVP 501
L +MK GYVP
Sbjct: 615 KLTVEMKKSGYVP 627
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 148/344 (43%), Gaps = 69/344 (20%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D+ L T + +C + ++ G C A+ +G + V SSL+ +Y + + DA VF
Sbjct: 73 DSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVF 132
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG--- 250
+++P VV+ +A+I+ FA++ +V EL+ R+ +E N ++ ++S SG
Sbjct: 133 DKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYL 192
Query: 251 --------------------------ALGQ------GRSAHCQTIRMGFFSYIQVANSLI 278
A+G G HC I+ G V ++LI
Sbjct: 193 DAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALI 252
Query: 279 SMYCKC-------------------------------GNVEEAVYVFNNMHGKD--IVSW 305
MY KC G V+ A+ VF G D +VSW
Sbjct: 253 DMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSW 312
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
SMIA +Q+G + A++LF EM + VKP+++T ++ +C + + GK +
Sbjct: 313 TSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLR 372
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+G+ ++ S ++D+ + G + +R MP N V W +
Sbjct: 373 NGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMP-NRNLVSWNS 415
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 86/186 (46%)
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ +S I F++ + ++ M + P+ +++ C AL G+
Sbjct: 36 LKTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQ 95
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
HC + G V +SL+ MY + ++++A VF+ + +V+ +++I+ +A+ G
Sbjct: 96 MHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGR 155
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+LF + V+ + +++ G+IS G + + F +M GLKP+ S
Sbjct: 156 VKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSS 215
Query: 378 VVDLLG 383
V+ +G
Sbjct: 216 VLPAVG 221
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 217/346 (62%), Gaps = 18/346 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+V+VG++L+ +Y KC A KVF+EMPV+NVVSW ++I+ AQ+ Q L ++R M+
Sbjct: 239 DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQ 298
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
++P+D T ++L++C G L G+ H R + + N+L+ MY KCG+++
Sbjct: 299 RLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSID 358
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A +VF M+ KD+ S+ +MI G A HG +A+DLF EM K ++PD +TF+GV+++C
Sbjct: 359 QACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACS 418
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLVEEG+ YF+ M+ + L+P+L+HY C+VDLLGRAGL+ EA +FI+ MPI P+A +
Sbjct: 419 HVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVL 478
Query: 408 -------------EAAESRL----LLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
E ES + +EP +V ++N+Y+ W A ++RK MK++
Sbjct: 479 GALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKER 538
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKT 496
L+ PGCS IE+ V++ F+ DKS+ ++ EI +LD ++ +K
Sbjct: 539 NLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLKN 584
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 132/309 (42%), Gaps = 53/309 (17%)
Query: 121 SMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
++ HD + +L SFLST + +C S + ++ I I + + +T+
Sbjct: 28 TLPHDFNPHKL----SFLST-LQTCKSIKGLK--------QIHASIIKTMPSPDAQLTIS 74
Query: 181 SKCRVI------ID---AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM-CLELYRMMRNS 230
++ + ID A + ++ N+ + AII A + L +Y+ M +
Sbjct: 75 TRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSK 134
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ P+++T +L AC S A+ +G H Q I+MG S + V+N+L+ MY C + A
Sbjct: 135 GIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSA 194
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF------------------------- 325
VF+ +D+VSW +MI GY + G A + L+
Sbjct: 195 RKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCG 254
Query: 326 -----EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
++ ++ + +++ +IS G +E F M + G+KP+ V++
Sbjct: 255 DANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLN 314
Query: 381 LLGRAGLLE 389
G+LE
Sbjct: 315 SCANLGVLE 323
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/394 (38%), Positives = 227/394 (57%), Gaps = 19/394 (4%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG-FIANVYVGSSLITLYSKC 183
++ ++VD + + + + R++ G + +G I +VYVGS+L+ +YSKC
Sbjct: 194 EMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKC 253
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
DA KVF EMP RN+VSW A+IA + Q + L++++ M +EPN T TS L
Sbjct: 254 GYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSAL 313
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
+AC G+L QGR H R ++ +L+ MY KCG V+EA+ VF + KD+
Sbjct: 314 TACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVY 373
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
W +MI G A G A+ +++LF +M++ RV+P+ +TFLGV+S+C HGGLV+EG F M
Sbjct: 374 PWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLM 433
Query: 364 -AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL------- 415
+ L+P +DHY C+VDLLGRAG LEEA FI+ MP+ P +W A S +
Sbjct: 434 ICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFEL 493
Query: 416 ----------LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
L+P + ++ LANLY+ + W+ AA VR+LMK KG+ +P CSWIE+
Sbjct: 494 GEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWIEVNG 553
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
V++ F A DKS+ + +L + Q+K Y
Sbjct: 554 VIHEFIAFDKSHIESINVYMMLGSVTAQLKLATY 587
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 143/261 (54%), Gaps = 12/261 (4%)
Query: 151 IRGGAPYQCLA--IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+R P+Q A ++ G + +V +SL++ ++ C + + ++F E ++VVSWTA+I
Sbjct: 117 LRNENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALI 176
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ + LE + MR+S +E ++ T S+L A + GR H + G
Sbjct: 177 NGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRV 236
Query: 269 SY-IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ + V ++L+ MY KCG ++AV VFN M +++VSW ++IAGY Q A+ +F+E
Sbjct: 237 IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQE 296
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKV---YFDSMAKHGLKPELDHYSCVVDLLGR 384
M+ + ++P+ T +++C G +++G+ Y D +K GL +L + +VD+ +
Sbjct: 297 MIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDR-SKLGLNSKLG--TALVDMYSK 353
Query: 385 AGLLEEARDFIKQMP---IYP 402
G ++EA +++P +YP
Sbjct: 354 CGCVDEALLVFEKLPAKDVYP 374
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 25/230 (10%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F+ + + W I+ +F+ Q M L Y +RN + P+ TF +L A +
Sbjct: 60 LFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 252 LGQGR-SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ AH + F +++Q NSL+S + CG V+ + +F KD+VSW ++I
Sbjct: 120 ENPFQFYAHIVKFGLDFDAFVQ--NSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALIN 177
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR-----------HGGLVEEGKVY 359
G ++G AV A++ F EM V+ D +T + V+ + HG VE G+V
Sbjct: 178 GCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVI 237
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+D S +VD+ + G ++A +MP N V W A
Sbjct: 238 WDVYVG----------SALVDMYSKCGYCDDAVKVFNEMPT-RNLVSWGA 276
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 241/413 (58%), Gaps = 33/413 (7%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG-FIANVYVGSSLITLYSKCRVIIDA 189
L+ D L++ V++C S ++ G ++T F ++ +G++L+ +Y+KC + +A
Sbjct: 244 LEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEA 303
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
+VF+ M +RNVVS T++++ +A+ V R M + M + N ++ ++++ T +
Sbjct: 304 RRVFDRMSIRNVVSETSMVSGYARAASVKAA----RFMFSKMTQRNVVSWNALIAGYTQN 359
Query: 250 G----ALGQGRSAHCQTIRMGFFSY-------IQVANSLISMYCKCGNVEEAVYVFNNMH 298
G AL R ++I +++ I V NSLI MY KCG++E+ VF M
Sbjct: 360 GENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMK 419
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+D VSWN++I GYAQ+G A+ +F +M+ KPD +T +GV+ +C H GLVEEG+
Sbjct: 420 ERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRH 479
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
YF SM +HGL P DHY+C+VDLLGRAG L EA++ I+ MP+ P+AV+W
Sbjct: 480 YFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 539
Query: 408 ------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AAE L ++P + +V L+N+YA + W RVRKLM+ +G+ PGCSWI
Sbjct: 540 NIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWI 599
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHK 514
E+ + V+ F +DKS+ +I VL L +QMK +GY+P+ ++ + D K
Sbjct: 600 EVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEAYDEQSK 652
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 32/309 (10%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
H L R+ ++S + + SC +R+ RG + T F +++ + LI +Y KC
Sbjct: 4 HGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKC 63
Query: 184 RVIIDAYKVFEEMPVRNVV-------------------------------SWTAIIAAFA 212
+ DA K+F+ MP RN SW ++++ FA
Sbjct: 64 DCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFA 123
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
Q + + LE + M N+++F S LSAC G L G H + + + +
Sbjct: 124 QHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVY 183
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
+ ++LI MY KCG+V A VF+ M +++V+WNS+I Y Q+G A A+++F MM
Sbjct: 184 MGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSG 243
Query: 333 VKPDAITFLGVISSCRHGGLVEEG-KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
++PD +T V+S+C ++EG +++ + + + +L + +VD+ + + EA
Sbjct: 244 LEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEA 303
Query: 392 RDFIKQMPI 400
R +M I
Sbjct: 304 RRVFDRMSI 312
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 230/383 (60%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++A++ C +R G +G+ +V + ++L+ LY++C I +A+ FEE+
Sbjct: 449 LASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIE 508
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ ++W +++ FAQ + L+++ M S ++ N FTF S LSA + QG+
Sbjct: 509 HKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ 568
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + I+ G +V N+LIS+Y KCG+ E+A F+ M ++ VSWN++I +QHG
Sbjct: 569 IHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGR 628
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYS 376
+ A+DLF++M K+ +KP+ +TF+GV+++C H GLVEEG YF SM+ ++G++P DHY+
Sbjct: 629 GLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYA 688
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
CV+D+ GRAG L+ A+ FI++MPI +A++W AA+ L LEP
Sbjct: 689 CVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPH 748
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+A++V L+N YA W +VRK+M+D+G++ PG SWIE+ NVV+ F D+ +
Sbjct: 749 DSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL 808
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I L + D++ +GY E
Sbjct: 809 AEQIYNFLAVINDRVAKVGYKQE 831
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 156/294 (53%), Gaps = 2/294 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSC-GSTRNIRGGAPYQCLAIRTGFIANVYVG 173
D K++S+ D R+ + + A+ +C G+ R + A+ G VG
Sbjct: 21 DPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVG 80
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+ LI LYSK +++ A +VFEE+ R+ VSW A+++ +AQ + L LYR M + +
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P + +S+LS+CT + QGR H Q + GF S I V N++I++Y +CG+ A V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F +M +D V++N++I+G+AQ G A+++FEEM + PD +T ++++C G +
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++G + K G+ + ++DL + G +E A I N V+W
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL-VIFNSSDRTNVVLW 313
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 139/264 (52%), Gaps = 1/264 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C TR I G L+++TGF +++YV LI +YSK + A +V E + ++VVS
Sbjct: 354 TCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVS 413
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT++IA + Q L ++ M+ + P++ S +S C G A+ QG H +
Sbjct: 414 WTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY 473
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + + N+L+++Y +CG + EA F + KD ++WN +++G+AQ GL A+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALK 533
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F M + VK + TF+ +S+ + +++GK + K G E + + ++ L G
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYG 593
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW 407
+ G E+A+ +M N V W
Sbjct: 594 KCGSFEDAKMEFSEMS-ERNEVSW 616
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 145/282 (51%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++ +HR + LS+ ++SC G + GF + ++VG+++
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
ITLY +C A +VF +MP R+ V++ +I+ AQ + LE++ M+ S L P+
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T +S+L+AC G L +G H + G S + SL+ +Y KCG+VE A+ +FN+
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
++V WN M+ + Q ++ +LF +M ++P+ T+ ++ +C ++ G
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ K G + ++ ++D+ + G LE+AR ++ +
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + ++ L D +S+ + +C S +++ G + G ++ + SL
Sbjct: 226 EHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LY KC + A +F NVV W ++ AF Q + EL+ M+ + + PN
Sbjct: 286 LDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQ 345
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ IL CT + + G H +++ GF S + V+ LI MY K G +E+A V
Sbjct: 346 FTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEM 405
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ KD+VSW SMIAGY QH A+ F+EM K + PD I IS C + +G
Sbjct: 406 LKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG 465
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G ++ ++ +V+L R G + EA +++ + + + W
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIE-HKDEITWNG 517
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 227/405 (56%), Gaps = 18/405 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ +S+ ++L +E L V+ + L+ + S S LA++ GFI + +V + L
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I Y KC + DA +VFEE ++++ T++I A +Q + ++L+ M LEP+
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F +S+L+AC A QG+ H I+ F S N+L+ Y KCG++E+A F++
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ + +VSW++MI G AQHG RA++LF M+ + + P+ IT V+ +C H GLV+E
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
K YF+SM + G+ +HYSC++DLLGRAG L++A + + MP NA IW
Sbjct: 626 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASR 685
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAE +LEPE + THV LAN YA W++ A+VRKLMKD +K P
Sbjct: 686 VHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAM 745
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
SWIE+ + V+ F DKS+ EI L L D M G+VP V
Sbjct: 746 SWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNV 790
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 134/252 (53%), Gaps = 5/252 (1%)
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAII 208
+ R GA +A+ TGF ++V+V ++L+ +Y + DA +VF E RN VSW ++
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+A+ + Q ++++ M S ++P +F F+ +++ACTGS + GR H +RMG+
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
+ AN+L+ MY K G V+ A +F M D+VSWN++I+G +G RAI+L +M
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV--VDLLGRAG 386
+ P+ T ++ +C G + G+ M K + D Y V VD+ +
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK--ANADSDDYIGVGLVDMYAKNH 352
Query: 387 LLEEARDFIKQM 398
L++AR M
Sbjct: 353 FLDDARKVFDWM 364
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S V +C +RNI G + +R G+ +V+ ++L+ +Y K + A +FE+MP
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VVSW A+I+ +EL M+ S L PN FT +SIL AC+G+GA GR
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQ 324
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ S + L+ MY K +++A VF+ M +D++ N++I+G + G
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGR 384
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISS 346
A+ LF E+ K+ + + T V+ S
Sbjct: 385 HDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 14/322 (4%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS----MHHDLHRERLKVDASF---------LSTAVTSCGS 147
+S +F+++ D+ VV LIS HD L + + LS+ + +C
Sbjct: 256 ASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSG 315
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
G I+ ++ Y+G L+ +Y+K + DA KVF+ M R+++ A+
Sbjct: 316 AGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNAL 375
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ + + D L L+ +R L N T ++L + A R H +++GF
Sbjct: 376 ISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGF 435
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
V N LI Y KC + +A VF DI++ SMI +Q AI LF E
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFME 495
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M+++ ++PD ++++C E+GK + K + + +V + G
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGS 555
Query: 388 LEEARDFIKQMPIYPNAVIWEA 409
+E+A +P V W A
Sbjct: 556 IEDAELAFSSLP-ERGVVSWSA 576
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 138/283 (48%), Gaps = 7/283 (2%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
A +S +T + + + GA +++G +A+ + LI+ YSKCR A + F+
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRFFD 61
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
E+P VSW++++ A++ ++ + MR + N+F +L C LG
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARLGA 120
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYA 313
H + GF S + VAN+L++MY G +++A VFN ++ VSWN +++ Y
Sbjct: 121 --QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
++ AI +F EM+ ++P F V+++C +E G+ + + G ++
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ +VD+ + G ++ A ++MP + V W A S +L
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVL 280
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 11/187 (5%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T + L+ + AL G H ++ G S N LIS Y KC A F+ +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEI 63
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF---LGVISSCRHGGLVE 354
VSW+S++ Y+ +GL AI F M + V + L + R G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGA--- 120
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+V+ +MA G ++ + +V + G G +++AR + NAV W S
Sbjct: 121 --QVHAMAMAT-GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAY 177
Query: 415 LLEPECA 421
+ +C
Sbjct: 178 VKNDQCG 184
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 230/383 (60%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++A++ C +R G +G+ +V + ++L+ LY++C I +A+ FEE+
Sbjct: 449 LASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIE 508
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ ++W +++ FAQ + L+++ M S ++ N FTF S LSA + QG+
Sbjct: 509 HKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ 568
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + I+ G +V N+LIS+Y KCG+ E+A F+ M ++ VSWN++I +QHG
Sbjct: 569 IHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGR 628
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYS 376
+ A+DLF++M K+ +KP+ +TF+GV+++C H GLVEEG YF SM+ ++G++P DHY+
Sbjct: 629 GLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYA 688
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
CV+D+ GRAG L+ A+ FI++MPI +A++W AA+ L LEP
Sbjct: 689 CVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPH 748
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+A++V L+N YA W +VRK+M+D+G++ PG SWIE+ NVV+ F D+ +
Sbjct: 749 DSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL 808
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I L + D++ +GY E
Sbjct: 809 AEQIYNFLAVINDRVAKVGYKQE 831
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 156/294 (53%), Gaps = 2/294 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSC-GSTRNIRGGAPYQCLAIRTGFIANVYVG 173
D K++S+ D R+ + + A+ +C G+ R + A+ G VG
Sbjct: 21 DPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVG 80
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+ LI LYSK +++ A +VFEE+ R+ VSW A+++ +AQ + L LYR M + +
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P + +S+LS+CT + QGR H Q + GF S I V N++I++Y +CG+ A V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F +M +D V++N++I+G+AQ G A+++FEEM + PD +T ++++C G +
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++G + K G+ + ++DL + G +E A I N V+W
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL-VIFNSSDRTNVVLW 313
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 139/264 (52%), Gaps = 1/264 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C TR I G L+++TGF +++YV LI +YSK + A +V E + ++VVS
Sbjct: 354 TCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVS 413
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT++IA + Q L ++ M+ + P++ S +S C G A+ QG H +
Sbjct: 414 WTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY 473
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + + N+L+++Y +CG + EA F + KD ++WN +++G+AQ GL A+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALK 533
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F M + VK + TF+ +S+ + +++GK + K G E + + ++ L G
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYG 593
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW 407
+ G E+A+ +M N V W
Sbjct: 594 KCGSFEDAKMEFSEMS-ERNEVSW 616
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 145/282 (51%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++ +HR + LS+ ++SC G + GF + ++VG+++
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
ITLY +C A +VF +MP R+ V++ +I+ AQ + LE++ M+ S L P+
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T +S+L+AC G L +G H + G S + SL+ +Y KCG+VE A+ +FN+
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
++V WN M+ + Q ++ +LF +M ++P+ T+ ++ +C ++ G
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ K G + ++ ++D+ + G LE+AR ++ +
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + ++ L D +S+ + +C S +++ G + G ++ + SL
Sbjct: 226 EHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LY KC + A +F NVV W ++ AF Q + EL+ M+ + + PN
Sbjct: 286 LDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQ 345
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ IL CT + + G H +++ GF S + V+ LI MY K G +E+A V
Sbjct: 346 FTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEM 405
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ KD+VSW SMIAGY QH A+ F+EM K + PD I IS C + +G
Sbjct: 406 LKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG 465
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G ++ ++ +V+L R G + EA +++ + + + W
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIE-HKDEITWNG 517
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 243/435 (55%), Gaps = 36/435 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGS 147
+ +FDQ+ V+ +IS + + R+ ++ + S+ + SC
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
++R C I+ G ++V+V S+LI +++K DA VF+EM + + W +I
Sbjct: 175 MSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I FAQ + D+ LEL++ M+ + T TS+L ACTG L G AH ++ +
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--Y 289
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ + N+L+ MYCKCG++E+A+ VFN M +D+++W++MI+G AQ+G + A+ LFE
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
M KP+ IT +GV+ +C H GL+E+G YF SM K +G+ P +HY C++DLLG+AG
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 387 LLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLAN 429
L++A + +M P+AV W AA+ + L+PE A T+ L+N
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA + WD +R M+D+G+K PGCSWIE+ ++ F D S+ ++ E+ L+
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQ 529
Query: 490 LVDQMKTLGYVPEVH 504
L+ ++ +GYVPE +
Sbjct: 530 LIHRLTGIGYVPETN 544
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 5/284 (1%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+ + + L L D++ S + C S R + G G +++ +
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
LI +Y K ++ DA+++F++MP RNV+SWT +I+A+++ LEL +M + P
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N +T++S+L +C G + R HC I+ G S + V ++LI ++ K G E+A+ VF
Sbjct: 161 NVYTYSSVLRSCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M D + WNS+I G+AQ+ + A++LF+ M + + T V+ +C L+E
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G + K+ +L + +VD+ + G LE+A QM
Sbjct: 278 LGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQM 319
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 242/418 (57%), Gaps = 26/418 (6%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H + +D L+TA+ + G N++ G Q AI+ GF +++V S ++ +Y KC
Sbjct: 1090 MHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGD 1149
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ +A ++F E+ + V+WT +I+ + + D L +Y +MR S ++P+++TF +++ A
Sbjct: 1150 MPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKA 1209
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
+ AL QG+ H +++ + V SL+ MYCKCG+V++A VF M + +V W
Sbjct: 1210 SSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFW 1269
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+M+ G AQHG A++LF M ++PD +TF+GV+S+C H GL E YFD+M K
Sbjct: 1270 NAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFK 1329
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------------- 409
+G+ PE++HYSC+VD LGRAG ++EA + I MP +A ++ A
Sbjct: 1330 TYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAK 1389
Query: 410 --AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
A+ L L+P ++ +V L+N+YA R WD R +MK K +K +PG SWI++ N V
Sbjct: 1390 RVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKV 1449
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLG-YVP-------EVHEEKVDDASHKRTE 517
+ F +D+S+ + S I ++ L+ +++ G YVP +V EE+ + A + +E
Sbjct: 1450 HLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSE 1507
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 144/290 (49%), Gaps = 8/290 (2%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRN---IRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
DL R+ LK D L++ + +C + G+ AI+ G I + +V ++LI LYS
Sbjct: 985 DLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYS 1044
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
K + +A + ++ SW AI+ + + + LE + +M + ++ T +
Sbjct: 1045 KGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLAT 1104
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+ A L QG+ I++GF + + V++ ++ MY KCG++ A+ +F + D
Sbjct: 1105 AIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPD 1164
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
V+W +MI+GY ++G A+ ++ M V+PD TF +I + +E+GK
Sbjct: 1165 EVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHA 1224
Query: 362 SMAKHGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ K L LDH+ + +VD+ + G +++A ++M + V W A
Sbjct: 1225 NVVK--LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVVFWNA 1271
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 129/260 (49%), Gaps = 10/260 (3%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G L I++ F V V +SL+ +YSK V+ A K F P +++SW +I+++AQ
Sbjct: 913 GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ----GRSAHCQTIRMGFFS 269
+ +R + L+P+ FT S+L AC+ +G G+ G H I+ G +
Sbjct: 973 NNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS-TGDEGEYFTLGSQVHVYAIKCGIIN 1031
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
V+ +LI +Y K G ++EA ++ + + D+ SWN+++ GY + + +A++ F M
Sbjct: 1032 DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMH 1091
Query: 330 KQRVKPDAITFLGVISSCRHGGLV--EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
+ + D IT I + G L+ ++GK K G +L S V+D+ + G
Sbjct: 1092 EMGIPIDEITLATAIKAS--GCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGD 1149
Query: 388 LEEARDFIKQMPIYPNAVIW 407
+ A + ++ P+ V W
Sbjct: 1150 MPNALELFGEIS-RPDEVAW 1168
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A K+F N+ +W + F Q+ ++ ++ + S + + T ILSA G
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ L G H I+ F + V+NSL++MY K G V A F N D++SWN+M
Sbjct: 907 ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-- 366
I+ YAQ+ L + AI F ++++ +KPD T V+ +C G +EG+ + H
Sbjct: 967 ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVY 1023
Query: 367 ----GLKPELDHYSCVVDLLGRAGLLEEA 391
G+ + + ++DL + G ++EA
Sbjct: 1024 AIKCGIINDSFVSTALIDLYSKGGKMDEA 1052
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + +S++H + ++ D +T + + + G ++ + + +VG+
Sbjct: 1180 DEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGT 1239
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL+ +Y KC + DAY+VF +M VR VV W A++ AQ VD L L+R M+++ ++P
Sbjct: 1240 SLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQP 1299
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ TF +LSAC+ SG + + G I+ + L+ + G ++EA V
Sbjct: 1300 DKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV 1359
Query: 294 FNNM 297
+M
Sbjct: 1360 IASM 1363
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 96/180 (53%), Gaps = 5/180 (2%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ--EWQVDM 219
+ +G + + Y+ ++LIT+YSKC + A +VF++ R++V+W +I+AA+AQ + +
Sbjct: 638 VTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYEN 697
Query: 220 CLELYRM---MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
LE +R+ +R T +L C SG + + H +++GF + V+ +
Sbjct: 698 VLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGA 757
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
L+++YCK G V +A +F+ M +D V WN M+ Y ++ A+ F + PD
Sbjct: 758 LVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPD 817
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 116/265 (43%), Gaps = 31/265 (11%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
A++ GF +++V +L+ +Y K ++ A +F++MP R+ V W ++ A+ + D
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGA-LGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L + S P+ F+++ G + + R H + ++ +Y
Sbjct: 803 LRFFSAFHRSGFXPD---FSNLHCVIGGVNSDVSNNRKRHAEQVK----AY--------- 846
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
A+ +F G +I +WN + + G V AID F+ +++ + D++T
Sbjct: 847 ----------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVT 896
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ ++S+ ++ G+ + K P + + ++++ +AG++ A P
Sbjct: 897 LVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP 956
Query: 400 ----IYPNAVIWEAAESRLLLEPEC 420
I N +I A++ L +E C
Sbjct: 957 ELDLISWNTMISSYAQNNLEMEAIC 981
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+ AH + + G + N+LI+MY KCG++ A VF+ +D+V+WNS++A YAQ
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
Query: 315 HGLA-----VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+ + LF + + +T ++ C G V+ + K G +
Sbjct: 690 FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFE 749
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+L +V++ + GL+ +AR +MP +AV+W
Sbjct: 750 LDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLW 786
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 242/418 (57%), Gaps = 26/418 (6%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H + +D L+TA+ + G N++ G Q AI+ GF +++V S ++ +Y KC
Sbjct: 1090 MHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGD 1149
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ +A ++F E+ + V+WT +I+ + + D L +Y +MR S ++P+++TF +++ A
Sbjct: 1150 MPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKA 1209
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
+ AL QG+ H +++ + V SL+ MYCKCG+V++A VF M + +V W
Sbjct: 1210 SSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFW 1269
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+M+ G AQHG A++LF M ++PD +TF+GV+S+C H GL E YFD+M K
Sbjct: 1270 NAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFK 1329
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------------- 409
+G+ PE++HYSC+VD LGRAG ++EA + I MP +A ++ A
Sbjct: 1330 TYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAK 1389
Query: 410 --AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
A+ L L+P ++ +V L+N+YA R WD R +MK K +K +PG SWI++ N V
Sbjct: 1390 RVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKV 1449
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLG-YVP-------EVHEEKVDDASHKRTE 517
+ F +D+S+ + S I ++ L+ +++ G YVP +V EE+ + A + +E
Sbjct: 1450 HLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSE 1507
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 144/290 (49%), Gaps = 8/290 (2%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRN---IRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
DL R+ LK D L++ + +C + G+ AI+ G I + +V ++LI LYS
Sbjct: 985 DLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYS 1044
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
K + +A + ++ SW AI+ + + + LE + +M + ++ T +
Sbjct: 1045 KGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLAT 1104
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+ A L QG+ I++GF + + V++ ++ MY KCG++ A+ +F + D
Sbjct: 1105 AIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPD 1164
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
V+W +MI+GY ++G A+ ++ M V+PD TF +I + +E+GK
Sbjct: 1165 EVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHA 1224
Query: 362 SMAKHGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ K L LDH+ + +VD+ + G +++A ++M + V W A
Sbjct: 1225 NVVK--LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVVFWNA 1271
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 129/260 (49%), Gaps = 10/260 (3%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G L I++ F V V +SL+ +YSK V+ A K F P +++SW +I+++AQ
Sbjct: 913 GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ----GRSAHCQTIRMGFFS 269
+ +R + L+P+ FT S+L AC+ +G G+ G H I+ G +
Sbjct: 973 NNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS-TGDEGEYFTLGSQVHVYAIKCGIIN 1031
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
V+ +LI +Y K G ++EA ++ + + D+ SWN+++ GY + + +A++ F M
Sbjct: 1032 DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMH 1091
Query: 330 KQRVKPDAITFLGVISSCRHGGLV--EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
+ + D IT I + G L+ ++GK K G +L S V+D+ + G
Sbjct: 1092 EMGIPIDEITLATAIKAS--GCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGD 1149
Query: 388 LEEARDFIKQMPIYPNAVIW 407
+ A + ++ P+ V W
Sbjct: 1150 MPNALELFGEIS-RPDEVAW 1168
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A K+F N+ +W + F Q+ ++ ++ + S + + T ILSA G
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ L G H I+ F + V+NSL++MY K G V A F N D++SWN+M
Sbjct: 907 ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-- 366
I+ YAQ+ L + AI F ++++ +KPD T V+ +C G +EG+ + H
Sbjct: 967 ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVY 1023
Query: 367 ----GLKPELDHYSCVVDLLGRAGLLEEA 391
G+ + + ++DL + G ++EA
Sbjct: 1024 AIKCGIINDSFVSTALIDLYSKGGKMDEA 1052
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + +S++H + ++ D +T + + + G ++ + + +VG+
Sbjct: 1180 DEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGT 1239
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL+ +Y KC + DAY+VF +M VR VV W A++ AQ VD L L+R M+++ ++P
Sbjct: 1240 SLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQP 1299
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ TF +LSAC+ SG + + G I+ + L+ + G ++EA V
Sbjct: 1300 DKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV 1359
Query: 294 FNNM 297
+M
Sbjct: 1360 IASM 1363
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 98/182 (53%), Gaps = 9/182 (4%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ--EWQVDM 219
+ +G + + Y+ ++LIT+YSKC + A +VF++ R++V+W +I+AA+AQ + +
Sbjct: 638 VTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYEN 697
Query: 220 CLELYRMMRNSMLEPNDFTFTSI-----LSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
LE +R+ +L F+ T + L C SG + + H +++GF + V+
Sbjct: 698 VLEGFRLF--GLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVS 755
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
+L+++YCK G V +A +F+ M +D V WN M+ Y ++ A+ F +
Sbjct: 756 GALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFF 815
Query: 335 PD 336
PD
Sbjct: 816 PD 817
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 116/265 (43%), Gaps = 31/265 (11%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
A++ GF +++V +L+ +Y K ++ A +F++MP R+ V W ++ A+ + D
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGA-LGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L + S P+ F+++ G + + R H + ++ +Y
Sbjct: 803 LRFFSAFHRSGFFPD---FSNLHCVIGGVNSDVSNNRKRHAEQVK----AY--------- 846
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
A+ +F G +I +WN + + G V AID F+ +++ + D++T
Sbjct: 847 ----------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVT 896
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ ++S+ ++ G+ + K P + + ++++ +AG++ A P
Sbjct: 897 LVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP 956
Query: 400 ----IYPNAVIWEAAESRLLLEPEC 420
I N +I A++ L +E C
Sbjct: 957 ELDLISWNTMISSYAQNNLEMEAIC 981
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+ AH + + G + N+LI+MY KCG++ A VF+ +D+V+WNS++A YAQ
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
Query: 315 HGLA-----VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+ + LF + + +T ++ C G V+ + K G +
Sbjct: 690 FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFE 749
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+L +V++ + GL+ +AR +MP +AV+W
Sbjct: 750 LDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLW 786
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 227/405 (56%), Gaps = 18/405 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ +S+ ++L +E L V+ + L+ + S S LA++ GFI + +V + L
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I Y KC + DA +VFEE ++++ T++I A +Q + ++L+ M LEP+
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F +S+L+AC A QG+ H I+ F S N+L+ Y KCG++E+A F++
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ + +VSW++MI G AQHG RA++LF M+ + + P+ IT V+ +C H GLV+E
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
K YF+SM + G+ +HYSC++DLLGRAG L++A + + MP NA IW
Sbjct: 626 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASR 685
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAE +LEPE + THV LAN YA W++ A+VRKLMKD +K P
Sbjct: 686 VHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAM 745
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
SWIE+ + V+ F DKS+ EI L L D M G+VP V
Sbjct: 746 SWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNV 790
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 152/310 (49%), Gaps = 19/310 (6%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDLHRERLKVDA------------SFLSTAVTSCGSTRNI 151
VFD++ D V L++ + + R + A F V C +
Sbjct: 59 VFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC--VPDA 116
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAIIAA 210
R GA +A+ TGF ++V+V ++L+ +Y + DA +VF E RN VSW +++A
Sbjct: 117 RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ + Q ++++ M S ++P +F F+ +++ACTGS + GR H +RMG+
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD 236
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ AN+L+ MY K G V+ A +F M D+VSWN++I+G +G RAI+L +M
Sbjct: 237 VFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKY 296
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV--VDLLGRAGLL 388
+ P+ T ++ +C G + G+ M K + D Y V VD+ + L
Sbjct: 297 SGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK--ANADSDDYIGVGLVDMYAKNHFL 354
Query: 389 EEARDFIKQM 398
++AR M
Sbjct: 355 DDARKVFDWM 364
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 109/209 (52%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S V +C +RNI G + +R G+ +V+ ++L+ +Y K + A +FE+MP
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VVSW A+I+ +EL M+ S L PN FT +SIL AC+G+GA GR
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQ 324
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ S + L+ MY K +++A VF+ M +D++ N++I+G + G
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGR 384
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISS 346
A+ LF E+ K+ + + T V+ S
Sbjct: 385 HDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 139/283 (49%), Gaps = 7/283 (2%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
A +S +T + + + GA +++G +A+ + LI+ YSKCR A +VF+
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRVFD 61
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
E+P VSW++++ A++ ++ + MR + N+F +L C LG
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARLGA 120
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYA 313
H + GF S + VAN+L++MY G +++A VFN ++ VSWN +++ Y
Sbjct: 121 --QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
++ AI +F EM+ ++P F V+++C +E G+ + + G ++
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ +VD+ + G ++ A ++MP + V W A S +L
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVL 280
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 14/322 (4%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS----MHHDLHRERLKVDASF---------LSTAVTSCGS 147
+S +F+++ D+ VV LIS HD L + + LS+ + +C
Sbjct: 256 ASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSG 315
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
G I+ ++ Y+G L+ +Y+K + DA KVF+ M R+++ A+
Sbjct: 316 AGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNAL 375
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ + + D L L+ +R L N T ++L + A R H +++GF
Sbjct: 376 ISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGF 435
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
V N LI Y KC + +A VF DI++ SMI +Q AI LF E
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFME 495
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M+++ ++PD ++++C E+GK + K + + +V + G
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGS 555
Query: 388 LEEARDFIKQMPIYPNAVIWEA 409
+E+A +P V W A
Sbjct: 556 IEDAELAFSSLP-ERGVVSWSA 576
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 11/187 (5%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T + L+ + AL G H ++ G S N LIS Y KC A VF+ +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEI 63
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF---LGVISSCRHGGLVE 354
VSW+S++ Y+ +GL AI F M + V + L + R G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGA--- 120
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+V+ +MA G ++ + +V + G G +++AR + NAV W S
Sbjct: 121 --QVHAMAMAT-GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAY 177
Query: 415 LLEPECA 421
+ +C
Sbjct: 178 VKNDQCG 184
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 243/435 (55%), Gaps = 36/435 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGS 147
+ +FDQ+ V+ +IS + + R+ ++ + S+ + SC
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
++R C I+ G ++V+V S+LI +++K DA VF+EM + + W +I
Sbjct: 175 MSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I FAQ + D+ LEL++ M+ + T TS+L ACTG L G AH ++ +
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--Y 289
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ + N+L+ MYCKCG++E+A+ VFN M +D+++W++MI+G AQ+G + A+ LFE
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
M KP+ IT +GV+ +C H GL+E+G YF SM K +G+ P +HY C++DLLG+AG
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 387 LLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLAN 429
L++A + +M P+AV W AA+ + L+PE A T+ L+N
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA + WD +R M+D+G+K PGCSWIE+ ++ F D S+ ++ E+ L+
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQ 529
Query: 490 LVDQMKTLGYVPEVH 504
L+ ++ +GYVPE +
Sbjct: 530 LIHRLTGIGYVPETN 544
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 5/284 (1%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+ + + L L D++ S + C S R + G G +++ +
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
LI +Y K ++ DA+++F++MP RNV+SWT +I+A+++ LEL +M + P
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N +T++S+L +C G + R HC I+ G S + V ++LI ++ K G E+A+ VF
Sbjct: 161 NVYTYSSVLRSCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M D + WNS+I G+AQ+ + A++LF+ M + + T V+ +C L+E
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G + K+ +L + +VD+ + G LE+A QM
Sbjct: 278 LGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQM 319
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 225/417 (53%), Gaps = 53/417 (12%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S+ + +C ++++ G +R G NV+V S+L+ +Y+ C I A VF+ M
Sbjct: 182 VSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMS 241
Query: 198 VRNVVSWTAIIAAF-----------------------------------AQEWQVDMCLE 222
R+ VSW +I A+ Q + + LE
Sbjct: 242 RRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALE 301
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
+ M+NS +PN T TS+L ACT +L G+ H R FF + +L+ MY
Sbjct: 302 VLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYA 361
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG++E + VF+ M +D VSWN+MI + HG A+ LF EM+ V+P+++TF G
Sbjct: 362 KCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTG 421
Query: 343 VISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V+S C H LV+EG + FDSM++ H ++P+ DH+SC+VD+L RAG LEEA +FIK+MPI
Sbjct: 422 VLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIE 481
Query: 402 PNAVIWEA----------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVR 444
P A W A A +RL +E + +V L+N+ + W +A+ R
Sbjct: 482 PTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETR 541
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
KLM+D+G+ NPGCSWI++ N V+ F DKSN + EI LD++ ++M+ GY+P
Sbjct: 542 KLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLP 598
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 127/252 (50%), Gaps = 1/252 (0%)
Query: 120 ISMHHDL-HRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
I ++D H+ ++ D L + +C S R++ AIR GF ++V +G++LI
Sbjct: 62 IQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALID 121
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y KCR A VFE MP R+V+SWT++ + + + L +R M + PN T
Sbjct: 122 MYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVT 181
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+SIL ACT L GR H +R G + V+++L++MY C ++ +A VF++M
Sbjct: 182 VSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMS 241
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+D VSWN +I Y + + + +F MM + V + ++ VI C G E+
Sbjct: 242 RRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALE 301
Query: 359 YFDSMAKHGLKP 370
M G KP
Sbjct: 302 VLSRMQNSGFKP 313
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 114/246 (46%), Gaps = 2/246 (0%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEP 234
I +YS + A +F+++P ++ +WT +I+A + + ++ Y R+ + +EP
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ S+ AC + + H IR GF S + + N+LI MY KC E A VF
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +D++SW SM + Y GL A+ F +M +P+++T ++ +C ++
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
G+ + ++G+ + S +V++ + +A+ M + V W +
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMS-RRDTVSWNVLITAY 255
Query: 415 LLEPEC 420
L EC
Sbjct: 256 FLNKEC 261
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 251/464 (54%), Gaps = 66/464 (14%)
Query: 105 FDQLLDTPVVDVEKLISMH--HDLHRERL------------KVDASFLSTAVTSCGSTRN 150
F+Q+++ VV +IS + H RE L K D L++A+++C + N
Sbjct: 234 FEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLEN 293
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC-----------------------RVII 187
++ G IRT F VG++LI++YSK ++
Sbjct: 294 LKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALL 353
Query: 188 DAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
D Y ++F+ + VR+VV+WTA+I + Q +EL+R M +PN++
Sbjct: 354 DGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNY 413
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T ++LS + +L GR H R G S + V+N+LI+MY K G++ +A +VFN +
Sbjct: 414 TLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLI 473
Query: 298 HGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
H K D ++W SMI AQHGL A+ LFE M++ +KPD IT++GV+S+C H GLVE+G
Sbjct: 474 HWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQG 533
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
+ Y++ M H + P HY+C++DL GRAGLL+EA FI+ MPI P+ + W
Sbjct: 534 RSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCK 593
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAE LL+EPE + + LAN+Y+ W+ AA +RK MKDKG+K + G
Sbjct: 594 VHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGF 653
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SW++I N V+ F +D + + I ++ + ++K +G+VP+
Sbjct: 654 SWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPD 697
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 40/267 (14%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ +V+ + +++ Y+K + +A++VFEEMP + VSWTA+I + Q Q + + ++R
Sbjct: 76 VKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFRE 135
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M + + P FT T++L++C LG GR H ++ G SYI VANSL++MY K G+
Sbjct: 136 MVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGD 195
Query: 287 VEEAVYVFNNMHGK-------------------------------DIVSWNSMIAGYAQH 315
A VF+ M K D+VSWN+MI+GY QH
Sbjct: 196 PVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQH 255
Query: 316 GLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
G A+D+F +M M KPD T +S+C + ++ GK + H ++ E D
Sbjct: 256 GFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGK----QIHAHIIRTEFDT 311
Query: 375 YSCV----VDLLGRAGLLEEARDFIKQ 397
+ V + + ++G +E A+ I+Q
Sbjct: 312 FGAVGNALISMYSKSGGVEIAQKIIEQ 338
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 146/341 (42%), Gaps = 65/341 (19%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E I M ++ + + L+ + SC + + G ++ G + + V +SL
Sbjct: 127 ENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSL 186
Query: 177 ITLYSK------CRVIIDAYKV-------------------------FEEMPVRNVVSWT 205
+ +Y+K +++ D K+ FE+M R+VVSW
Sbjct: 187 LNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWN 246
Query: 206 AIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
A+I+ + Q L+++ +M+ +S +P+ FT S LSAC L G+ H IR
Sbjct: 247 AMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIR 306
Query: 265 MGFFSYIQVANSLISMYCKCGNVE---------------------------------EAV 291
F ++ V N+LISMY K G VE A
Sbjct: 307 TEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPAR 366
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F+++ +D+V+W +MI GY Q+G A++LF M+K+ KP+ T ++S
Sbjct: 367 RIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLA 426
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
++ G+ S + G + + ++ + ++G + +AR
Sbjct: 427 SLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDAR 467
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+S H + I+ G + + N+L++ Y K G + +A VF+ M K + SWN +++GYA+
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G A +FEEM +PD++++ +I G E F M + P
Sbjct: 92 GGRLEEAHRVFEEM----PEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPP 143
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 226/402 (56%), Gaps = 18/402 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S+ + +E V+ + L+ + S S I LA + GF+++ +V + LI
Sbjct: 389 LSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDS 448
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + AY+VFE+ +++++T++I A +Q + ++L+ M L+P+ F
Sbjct: 449 YWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVL 508
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S+L+AC A QG+ H I+ F S + N+L+ Y KCG++E+A F+ +
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPE 568
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K +VSW++MI G AQHG RA+D+F M+ + + P+ IT V+ +C H GLV+E K Y
Sbjct: 569 KGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRY 628
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
F+SM + G++ +HY+C++DLLGRAG L++A + + MP NA +W
Sbjct: 629 FNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHR 688
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AAE +LEPE + THV LAN YA WD A+VRKLMKD +K P SW+
Sbjct: 689 DPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWV 748
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
E+ + V+ F DKS+ R +I LD L D M GYVP V
Sbjct: 749 ELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNV 790
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 144/285 (50%), Gaps = 10/285 (3%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAIIAAFA 212
G LA+ TG +++V ++L+ +Y + +A VF+E RN VSW +++A+
Sbjct: 119 GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + ++++ M ++PN+F F+ +++ACTGS L GR H IR G+ +
Sbjct: 179 KNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVF 238
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
AN+L+ MY K G++ A VF + D+VSWN+ I+G HG A++L +M
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC--VVDLLGRAGLLEE 390
+ P+ T ++ +C G G+ M K + D+Y +VD+ + GLL++
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVK--ANADSDNYIAFGLVDMYAKHGLLDD 356
Query: 391 ARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVR 435
A+ +P + V+W A L+ A H + +L+ +R
Sbjct: 357 AKKVFDWIP-QRDLVLWNA----LISGCSHGAQHAEALSLFCRMR 396
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S V +C +R++ G + IRTG+ +V+ ++L+ +YSK I A VF ++P
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVP 264
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VVSW A I+ LEL M++S L PN FT +SIL AC GSGA GR
Sbjct: 265 ETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQ 324
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++ S +A L+ MY K G +++A VF+ + +D+V WN++I+G +
Sbjct: 325 IHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQ 384
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISS 346
A+ LF M K+ + T V+ S
Sbjct: 385 HAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 14/319 (4%)
Query: 104 VFDQLLDTPVVDVEKLIS---MH-HDLHRERLKV---------DASFLSTAVTSCGSTRN 150
VF ++ +T VV IS +H HD H L + + LS+ + +C +
Sbjct: 259 VFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGA 318
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
G ++ ++ Y+ L+ +Y+K ++ DA KVF+ +P R++V W A+I+
Sbjct: 319 FNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISG 378
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ Q L L+ MR + N T ++L + A+ R H ++GF S
Sbjct: 379 CSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSD 438
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V N LI Y KC + A VF DI+++ SMI +Q AI LF EM++
Sbjct: 439 SHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLR 498
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+ + PD ++++C E+GK + K ++ + +V + G +E+
Sbjct: 499 KGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIED 558
Query: 391 ARDFIKQMPIYPNAVIWEA 409
A +P V W A
Sbjct: 559 ADLAFSGLP-EKGVVSWSA 576
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 7/269 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+T +T+++ GA +++G A + L++ YSKCR+ A +VF+E+P
Sbjct: 11 LTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPDPCH 68
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSW++++ A++ L +R MR+ + N+F +L +G G H
Sbjct: 69 VSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---GTQLHAL 125
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQHGLAVR 320
+ G I VAN+L++MY G V+EA VF+ ++ VSWN +++ Y ++
Sbjct: 126 AMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSH 185
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
A+ +F EM+ V+P+ F V+++C +E G+ + + G ++ + +VD
Sbjct: 186 AVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVD 245
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + G + A ++P + V W A
Sbjct: 246 MYSKLGDIRMAAVVFGKVP-ETDVVSWNA 273
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 2/201 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E I + ++ R+ L D LS+ + +C S G I+ F+++V+ G++L
Sbjct: 487 EDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNAL 546
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ Y+KC I DA F +P + VVSW+A+I AQ L+++ M + + PN
Sbjct: 547 VYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNH 606
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T TS+L AC +G + + + M G + +I + + G +++A+ + N
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVN 666
Query: 296 NM-HGKDIVSWNSMIAGYAQH 315
+M + W +++A H
Sbjct: 667 SMPFQTNAAVWGALLAASRVH 687
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 229/383 (59%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++A ++C + +R G +G+ A++ + ++L+ LY++C +A+ +F E+
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREID 509
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ ++W +I+ F Q + L ++ M + + N FTF S +SA + QG+
Sbjct: 510 HKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQ 569
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + ++ G S +VAN+LIS+Y KCG++E+A +F+ M ++ VSWN++I +QHG
Sbjct: 570 VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR 629
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
+ A+DLF++M ++ +KP+ +TF+GV+++C H GLVEEG YF SM+ +GL P DHY+
Sbjct: 630 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYA 689
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
CVVD+LGRAG L+ AR F+ +MPI NA+IW AA+ L LEP
Sbjct: 690 CVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPH 749
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+A++V L+N YA W +VRK+MKD+G++ PG SWIE+ N V+ F D+ +
Sbjct: 750 DSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPL 809
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I L L D++ +GY E
Sbjct: 810 SDQIYKFLSELNDRLSKIGYKQE 832
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 142/264 (53%), Gaps = 1/264 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C T I G L+I+ GF +++YV LI +YSK R + A K+ E + R+VVS
Sbjct: 355 TCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVS 414
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT++IA + Q + L ++ M++ + P++ S SAC G A+ QG H +
Sbjct: 415 WTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY 474
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + I + N+L+++Y +CG EEA +F + KD ++WN +I+G+ Q L +A+
Sbjct: 475 VSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALM 534
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F +M + K + TF+ IS+ + +++GK K G E + + ++ L G
Sbjct: 535 VFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYG 594
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW 407
+ G +E+A+ +M + N V W
Sbjct: 595 KCGSIEDAKMIFSEMSL-RNEVSW 617
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 131/243 (53%), Gaps = 1/243 (0%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
G A+ +G+ LI LY+K ++ A +VF+E+ R+ VSW A+++ +AQ LY
Sbjct: 73 GLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLY 132
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M + + P + +S+LSACT QGR H Q + F S V N+LI++Y
Sbjct: 133 SQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G+ + A VF +M D V++N++I+G+AQ G A+ +F+EM ++PD +T ++
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
++C G +++GK + K G+ + ++DL + G +E A D I + N
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD-IFNLGDRTNV 311
Query: 405 VIW 407
V+W
Sbjct: 312 VLW 314
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 4/288 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ D +++ + +C S +++ G ++ G + SL+ LY KC I A+
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F NVV W ++ A+ Q + E++ M+ + + PN FT+ IL CT +G
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTG 360
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ G H +I+ GF S + V+ LI MY K +++A + + +D+VSW SMIA
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIA 420
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY QH A+ F+EM V PD I S+C + +G + G
Sbjct: 421 GYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAA 480
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQM----PIYPNAVIWEAAESRL 414
++ ++ +V+L R G EEA +++ I N +I +SRL
Sbjct: 481 DISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRL 528
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ +++C + G + F + +VG++LI LY A +VF +M
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDML 206
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ V++ +I+ AQ + L+++ M+ S L P+ T S+L+AC G L +G+
Sbjct: 207 FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266
Query: 258 AHCQTIRMGF-FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H ++ G F YI SL+ +Y KCG++E A +FN ++V WN M+ Y Q
Sbjct: 267 LHSYLLKAGMSFDYI-TEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQIS 325
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
++ ++F +M + P+ T+ ++ +C G +E G+ K+G + ++
Sbjct: 326 DLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385
Query: 377 CVVDLLGRAGLLEEARDFIKQM 398
++D+ + L++AR ++ +
Sbjct: 386 VLIDMYSKYRCLDKARKILEML 407
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 239 FTSILSACTGSGA-LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T L AC G G H ++ G + + N LI +Y K G V +A VF +
Sbjct: 45 LTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL 104
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D VSW +M++GYAQ GL A L+ +M V P V+S+C G L +G+
Sbjct: 105 SSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGR 164
Query: 358 VYFDSMAKHGLKPE 371
+ + K E
Sbjct: 165 MIHAQVYKQAFCSE 178
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 270/493 (54%), Gaps = 46/493 (9%)
Query: 52 LDIISPRTRDST-KTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLD 110
L + + R RD+ VH RL D + L S + + ++ + VFD +
Sbjct: 254 LLLAAARARDTALAAAVHRRLEADPVFRSDPFL-STRLIEAYAALSALPAARQVFD---E 309
Query: 111 TPVVDV----------------EKLISMHHDLHRERLKVDASFLSTAVTSC--GSTRNIR 152
PV ++ E+ ++ D+ R + VD+ + + +C S ++
Sbjct: 310 APVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLP 369
Query: 153 GGAPYQCL---AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
A + + AIR G+ + +V ++LI Y+K ++ A +VF MP RN+VSW+A+I
Sbjct: 370 ASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIG 429
Query: 210 AFAQEWQVDMCLELYR--MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
+A+ + +++++ M ++ L PN T S+L AC G ALGQG+ H +R GF
Sbjct: 430 CYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGF 489
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ V N+L++MY KCG +E Y+FN + +++VSWNS+I+GY HG ++ +FE
Sbjct: 490 DLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFE 549
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
EM+++ + P+ ITF+ V+ +C H GLVE+GK F+SM ++ + P +HY+C+VDLLGRAG
Sbjct: 550 EMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGRAG 609
Query: 387 LLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLAN 429
L+EA + I+ M I P+ +W E A S L LEP A +V LA+
Sbjct: 610 RLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLAD 669
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA + +Q +++L+++ L+ PGCSWIE+ +Y F + D N ++ E+ ++
Sbjct: 670 IYARAKLQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGE 729
Query: 490 LVDQMKTLGYVPE 502
V QMK GYVP+
Sbjct: 730 FVTQMKNEGYVPD 742
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 235/404 (58%), Gaps = 20/404 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S+ ++ R K + +T +TSC + G L ++ + ++++VGSSL+ +
Sbjct: 137 LSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDM 196
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K I +A ++FE +P R+VVS TAIIA +AQ + LE+++ +++ + PN T+
Sbjct: 197 YAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTY 256
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+L+A +G L G+ AHC +R Y + NSLI MY KCGN+ A +F+NM
Sbjct: 257 ASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPE 316
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ +SWN+M+ GY++HGL ++LF M ++RVKPDA+T L V+S C HG + + G
Sbjct: 317 RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLS 376
Query: 359 YFDSM--AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV----------- 405
+D M ++G+KP+ +HY C+VD+LGRAG ++EA +FIK+MP P A
Sbjct: 377 IYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRV 436
Query: 406 -----IWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
I E RL+ +EPE A +V L+NLYA W+ VR +M K + PG S
Sbjct: 437 HLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRS 496
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
WI+ ++ F A D+++ R E+L + + +MK GYVP++
Sbjct: 497 WIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDI 540
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 149/272 (54%), Gaps = 9/272 (3%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C R +R G I+T ++ Y+ + L+ Y KC + DA KV +EMP +NV
Sbjct: 58 LNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 117
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWTA+I+ ++Q L ++ M S +PN+FTF ++L++C + L G+ H
Sbjct: 118 VSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGL 177
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ + S+I V +SL+ MY K G +EEA +F + +D+VS ++IAGYAQ GL A
Sbjct: 178 IVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 237
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC---- 377
+++F+ + + ++P+ +T+ ++++ L++ GK H L+ EL Y+
Sbjct: 238 LEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGK----QAHCHVLRRELPFYAVLQNS 293
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ + G L A+ MP A+ W A
Sbjct: 294 LIDMYSKCGNLSYAQRLFDNMP-ERTAISWNA 324
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ ++L+AC AL +G+ H I+ + + L+ Y KC +E+A V + M
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 113
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
K++VSW +MI+ Y+Q G + A+ +F EMM+ KP+ TF V++SC + GK
Sbjct: 114 EKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQ 173
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ K + S ++D+ +AG +EEAR+ + +P
Sbjct: 174 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLP 214
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 3/187 (1%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + M L E ++ + ++ +T+ + G C +R + +SL
Sbjct: 235 EEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 294
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM-LEPN 235
I +YSKC + A ++F+ MP R +SW A++ +++ LEL+R+MR+ ++P+
Sbjct: 295 IDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 354
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTI--RMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
T ++LS C+ G S + + G + ++ M + G ++EA
Sbjct: 355 AVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEF 414
Query: 294 FNNMHGK 300
M K
Sbjct: 415 IKRMPSK 421
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 225/372 (60%), Gaps = 18/372 (4%)
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
++R G +AIR GF + V+V ++L+ +Y+ C A+K+FE M RN+V+W ++I
Sbjct: 10 DVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVIN 69
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+A + + L L+R M +EP+ FT S+LSAC GAL GR AH +++G
Sbjct: 70 GYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDG 129
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ N+L+ +Y KCG++ +A VF+ M K +VSW S+I G A +G A++LF+E+
Sbjct: 130 NLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELE 189
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLL 388
++ + P ITF+GV+ +C H G+V+EG YF M ++G+ P+++HY C+VDLLGRAGL+
Sbjct: 190 RKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLV 249
Query: 389 EEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLY 431
++A +FI+ MP+ PNAV+W E A ++LL LEP+ + +V L+NLY
Sbjct: 250 KQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLY 309
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A + W +VR+ M +G+K PG S +E+ N ++ F D+S+ + EI L +
Sbjct: 310 ASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEIT 369
Query: 492 DQMKTLGYVPEV 503
+K GYVP +
Sbjct: 370 KLLKLEGYVPHI 381
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ ++ ++ D + + +++C + G ++ G N++ G++L+ L
Sbjct: 81 LTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDL 140
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I A+KVF+EM ++VVSWT++I A LEL++ + L P++ TF
Sbjct: 141 YAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITF 200
Query: 240 TSILSACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+L AC+ G + +G + G I+ ++ + + G V++A NM
Sbjct: 201 VGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMP 260
Query: 299 GK-DIVSWNSMIAGYAQHG 316
+ + V W +++ HG
Sbjct: 261 MQPNAVVWRTLLGACTIHG 279
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 223/360 (61%), Gaps = 19/360 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++T + + VG++L+ Y K + +A KVF + +++V+W+A++A +AQ + + +
Sbjct: 24 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 83
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGA-LGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+++ + ++PN+FTF+SIL+ C + A +GQG+ H I+ S + V+++L++M
Sbjct: 84 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 143
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K GN+E A VF KD+VSWNSMI+GYAQHG A++A+D+F+EM K++VK D +TF
Sbjct: 144 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 203
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+GV ++C H GLVEEG+ YFD M + + P +H SC+VDL RAG LE+A I+ MP
Sbjct: 204 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 263
Query: 400 IYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
+ IW AAE + ++PE +A +V L+N+YA W + A+
Sbjct: 264 NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 323
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VRKLM ++ +K PG SWIE+ N Y F A D+S+ +I L+ L ++K LGY P+
Sbjct: 324 VRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 383
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+FT++ IL+A + H Q ++ + V +L+ Y K G VEEA VF+
Sbjct: 1 EFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 56
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH-GGLVE 354
+ KDIV+W++M+AGYAQ G AI +F E+ K +KP+ TF +++ C +
Sbjct: 57 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 116
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
+GK + K L L S ++ + + G +E A + K+
Sbjct: 117 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 159
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRG-GAPYQCLAIRTGFIANVYVG 173
+ E I M +L + +K + S+ + C +T G G + AI++ +++ V
Sbjct: 78 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 137
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
S+L+T+Y+K I A +VF+ +++VSW ++I+ +AQ Q L++++ M+ ++
Sbjct: 138 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 197
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS-LISMYCKCGNVEEAVY 292
+ TF + +ACT +G + +G +R + + NS ++ +Y + G +E+A+
Sbjct: 198 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 257
Query: 293 VFNNM---HGKDIVSWNSMIAGYAQH 315
V NM G I W +++A H
Sbjct: 258 VIENMPNPAGSTI--WRTILAACRVH 281
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 209/353 (59%), Gaps = 18/353 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV +++IT Y++C I +A +F++MP R+ VSW A+IA ++Q L L+ +M
Sbjct: 337 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLME 396
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N +F+S LS C AL G+ H + ++ G+ + V N+L+ MYCKCG++E
Sbjct: 397 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 456
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA +F M GKDIVSWN+MIAGY++HG A+ FE M ++ +KPD T + V+S+C
Sbjct: 457 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACS 516
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV++G+ YF +M + +G++P HY+C+VDLLGRAGLLEEA + +K MP P+A IW
Sbjct: 517 HTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIW 576
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AA+ +EPE + +V L+NLYA W ++R M+DK
Sbjct: 577 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 636
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
G+K PG SWIEI N + F D+ + EI L+ L +MK GYV +
Sbjct: 637 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKT 689
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 120/234 (51%), Gaps = 12/234 (5%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ +V +++IT Y++ I +A ++F+E PV +V +WTA+++ + Q V+ EL+
Sbjct: 242 VRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELF-- 299
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA--NSLISMYCKC 284
+ M E N+ ++ ++L+ QG V+ N++I+ Y +C
Sbjct: 300 --DRMPERNEVSWNAMLAGYV------QGERVEMAKELFDVMPCRNVSTWNTMITGYAQC 351
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G + EA +F+ M +D VSW +MIAGY+Q G + A+ LF M ++ + + +F +
Sbjct: 352 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSAL 411
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
S+C +E GK + K G + + ++ + + G +EEA D K+M
Sbjct: 412 STCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 465
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 98/193 (50%), Gaps = 2/193 (1%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE +++ S S+A+++C + G ++ G+ +VG++L+ +Y KC
Sbjct: 395 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 454
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I +A +F+EM +++VSW +IA +++ + L + M+ L+P+D T ++LSA
Sbjct: 455 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSA 514
Query: 246 CTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIV 303
C+ +G + +GR H T G Q ++ + + G +EEA + NM D
Sbjct: 515 CSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAA 574
Query: 304 SWNSMIAGYAQHG 316
W +++ HG
Sbjct: 575 IWGTLLGASRVHG 587
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 20/226 (8%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+I Y + R + A ++FE MP R+V SW I++ +AQ + C++ R + + M E N
Sbjct: 127 MIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQ----NGCVDDARRVFDRMPEKN 182
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
D ++ ++LSA + L + S+ N L+ + K + EA F+
Sbjct: 183 DVSWNALLSAYVQNSKLEEACVLFGSRENWALVSW----NCLLGGFVKKKKIVEARQFFD 238
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+M +D+VSWN++I GYAQ+G A LF+E D T+ ++S +VEE
Sbjct: 239 SMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVH----DVFTWTAMVSGYIQNRMVEE 294
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLG--RAGLLEEARDFIKQMP 399
+ FD M PE + S L G + +E A++ MP
Sbjct: 295 ARELFDRM------PERNEVSWNAMLAGYVQGERVEMAKELFDVMP 334
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 117/241 (48%), Gaps = 27/241 (11%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++++ Y++ + DA +VF+ MP +N VSW A+++A+ Q +++ L+ N L
Sbjct: 156 NTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWAL- 214
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA-----NSLISMYCKCGNVE 288
++ +L + + R FF ++V N++I+ Y + G ++
Sbjct: 215 ---VSWNCLLGGFVKKKKIVEARQ---------FFDSMKVRDVVSWNTIITGYAQNGEID 262
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA +F+ D+ +W +M++GY Q+ + A +LF+ M ++ + +++ +++
Sbjct: 263 EARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYV 318
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
G VE K FD M + ++ ++ + G + EA++ +MP + V W
Sbjct: 319 QGERVEMAKELFDVMPCRNVST----WNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWA 373
Query: 409 A 409
A
Sbjct: 374 A 374
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 17/221 (7%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F+EMP R++VSW +I + + + EL+ M E + ++ +ILS
Sbjct: 109 ARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF----ERMPERDVCSWNTILSGYAQ 164
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+G + R + S+ N+L+S Y + +EEA +F + +VSWN +
Sbjct: 165 NGCVDDARRVFDRMPEKNDVSW----NALLSAYVQNSKLEEACVLFGSRENWALVSWNCL 220
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ G+ + V A F+ M +V+ D +++ +I+ G ++E + FD H
Sbjct: 221 LGGFVKKKKIVEARQFFDSM---KVR-DVVSWNTIITGYAQNGEIDEARQLFDESPVH-- 274
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ ++ +V + ++EEAR+ +MP N V W A
Sbjct: 275 --DVFTWTAMVSGYIQNRMVEEARELFDRMP-ERNEVSWNA 312
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 112/238 (47%), Gaps = 27/238 (11%)
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I+ Y + +A +VF+ MP + VS+ A+I+ + + + EL RM+ + M E +
Sbjct: 66 ISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGE----FELARMLFDEMPERDL 121
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
++ ++ + LG+ R + S+ N+++S Y + G V++A VF+
Sbjct: 122 VSWNVMIKGYVRNRNLGKARELFERMPERDVCSW----NTILSGYAQNGCVDDARRVFDR 177
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M K+ VSWN++++ Y Q+ A LF + V +C GG V++
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWAL---------VSWNCLLGGFVKKK 228
Query: 357 KV-----YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K+ +FDSM ++ ++ ++ + G ++EAR + P++ + W A
Sbjct: 229 KIVEARQFFDSMKVR----DVVSWNTIITGYAQNGEIDEARQLFDESPVH-DVFTWTA 281
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
S I+ N IS Y + G EA+ VF M VS+N+MI+GY ++G A LF+EM
Sbjct: 57 SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGRAG 386
++ + + G + + R+ G E F+ M PE D ++ ++ + G
Sbjct: 117 PERDLVSWNVMIKGYVRN-RNLGKARE---LFERM------PERDVCSWNTILSGYAQNG 166
Query: 387 LLEEARDFIKQMPIYPNAVIWEA 409
+++AR +MP N V W A
Sbjct: 167 CVDDARRVFDRMP-EKNDVSWNA 188
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 225/405 (55%), Gaps = 18/405 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ S+ + L +E L V+ + L+ + S S LA + GFI + +V + L
Sbjct: 386 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 445
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I Y KC + DA +VFEE ++++ T++I A +Q + ++L+ M LEP+
Sbjct: 446 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F +S+L+AC A QG+ H I+ F S N+L+ Y KCG++E+A F++
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ + +VSW++MI G AQHG RA++LF M+ + + P+ IT V+ +C H GLV+E
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
K YF+SM + G+ +HYSC++DLLGRAG L++A + + MP NA +W
Sbjct: 626 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASR 685
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAE +LEPE + THV LAN YA W++ A+VRKLMKD +K P
Sbjct: 686 VHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAM 745
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
SW+E+ + V+ F DKS+ EI LD L D M GY+P V
Sbjct: 746 SWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNV 790
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 137/259 (52%), Gaps = 6/259 (2%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAIIAAFA 212
GA +A+ TGF ++V+V ++L+ +Y + DA +VF+E RN VSW +++A+
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 178
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ Q ++++ M S ++P +F F+ +++ACTGS + GR H +RMG+ +
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 238
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
AN+L+ MY K G V+ A +F M D+VSWN++I+G +G RAI+L +M
Sbjct: 239 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 298
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV--VDLLGRAGLLEE 390
+ P+ ++ +C G + G+ M K + D Y V VD+ + L++
Sbjct: 299 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK--ANADSDDYIGVGLVDMYAKNHFLDD 356
Query: 391 ARDFIKQMPIYPNAVIWEA 409
A M + + ++W A
Sbjct: 357 AMKVFDWMS-HRDLILWNA 374
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 10/255 (3%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S V +C +RNI G + +R G+ +V+ ++L+ +Y K + A +FE+MP
Sbjct: 205 FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP 264
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VVSW A+I+ +EL M++S L PN F +SIL AC G+GA GR
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQ 324
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ S + L+ MY K +++A+ VF+ M +D++ WN++I+G + G
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGR 384
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSC----------RHGGLVEEGKVYFDSMAKHG 367
A +F + K+ + + T V+ S + L E+ FD+ +G
Sbjct: 385 HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNG 444
Query: 368 LKPELDHYSCVVDLL 382
L SC+ D +
Sbjct: 445 LIDSYWKCSCLSDAI 459
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 139/323 (43%), Gaps = 16/323 (4%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS----MHHDLHR----------ERLKVDASFLSTAVTSCG 146
+S +F+++ D+ VV LIS HD HR L + LS+ + +C
Sbjct: 256 ASVIFEKMPDSDVVSWNALISGCVLNGHD-HRAIELLLQMKSSGLVPNVFMLSSILKACA 314
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
G I+ ++ Y+G L+ +Y+K + DA KVF+ M R+++ W A
Sbjct: 315 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNA 374
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I+ + + D ++ +R L N T ++L + A R H ++G
Sbjct: 375 LISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIG 434
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
F V N LI Y KC + +A+ VF DI++ SMI +Q AI LF
Sbjct: 435 FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFM 494
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
EM+++ ++PD ++++C E+GK + K + + +V + G
Sbjct: 495 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCG 554
Query: 387 LLEEARDFIKQMPIYPNAVIWEA 409
+E+A +P V W A
Sbjct: 555 SIEDAELAFSSLP-ERGVVSWSA 576
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 142/283 (50%), Gaps = 7/283 (2%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
A +S +T + + + GA +++GF+A++ + LI+ YSKCR A +VF+
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFD 61
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
E+P VSW++++ A++ ++ + MR + N+F +L C LG
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDAQLGA 120
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYA 313
H + GF S + VAN+L++MY G +++A VF+ ++ VSWN +++ Y
Sbjct: 121 --QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 178
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
++ AI +F EM+ ++P F V+++C ++ G+ + + G + ++
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 238
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ +VD+ + G ++ A ++MP + V W A S +L
Sbjct: 239 TANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVL 280
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 5/184 (2%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T + L+ + AL G H ++ GF + ++ N LIS Y KC A VF+ +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFDEI 63
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
VSW+S++ Y+ +GL AI F M + V + V+ L +
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL--GAQ 121
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLE 417
V+ +MA G ++ + +V + G G +++AR + NAV W S +
Sbjct: 122 VHAMAMAT-GFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180
Query: 418 PECA 421
+C
Sbjct: 181 DQCG 184
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 228/392 (58%), Gaps = 18/392 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E LK+D + + +CG I G IRT ++YVGS+LI +Y KC+ +
Sbjct: 261 EGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHY 320
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF+ M +NVVSWTA++ + Q + ++++ M+ S ++P+ +T +SAC
Sbjct: 321 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACAN 380
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+L +G H + I G YI V+NSL+++Y KCG+++++ +FN M+ +D VSW +M
Sbjct: 381 ISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAM 440
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHG 367
++ YAQ G AV AI LF++M++ +KPD +T GVIS+C GLVE+G+ YF+ M ++G
Sbjct: 441 VSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYG 500
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
+ P HYSC++DL R+G +EEA FI MP P+A+ W AA
Sbjct: 501 IVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAA 560
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
ES + L+P A + L+++YA WD A++R+ MK+K ++ PG SWI+ ++ F
Sbjct: 561 ESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSF 620
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
A+D+S+ +I L+ L ++ GY P+
Sbjct: 621 SADDESSPYSDQIYAKLEELYQKIIDNGYKPD 652
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 140/305 (45%), Gaps = 31/305 (10%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L T + S ++ G I+ GF + + VGS L+ +YSK I DA KVF +
Sbjct: 139 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLD 198
Query: 198 VRNVV------------------------------SWTAIIAAFAQEWQVDMCLELYRMM 227
RN V SW+A+I AQ +E +R M
Sbjct: 199 DRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREM 258
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ L+ + + F S+L AC G GA+ GR H IR +I V ++LI MYCKC +
Sbjct: 259 KIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCL 318
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
A VF+ M K++VSW +M+ GY Q G A A+ +F +M + + PD T IS+C
Sbjct: 319 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISAC 378
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ +EEG + GL + + +V L G+ G ++++ +M + + V W
Sbjct: 379 ANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDEVSW 437
Query: 408 EAAES 412
A S
Sbjct: 438 TAMVS 442
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 34/273 (12%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MM 227
N++ ++L+ YSK + + + FE++P R+ V+W +I ++ V ++ Y MM
Sbjct: 68 NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK---- 283
++ T ++L + +G + G+ H Q I++GF SY+ V + L+ MY K
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187
Query: 284 ---------------------------CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
CG +E+A+ +F M KD VSW++MI G AQ+G
Sbjct: 188 SDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME-KDSVSWSAMIKGLAQNG 246
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+ AI+ F EM + +K D F V+ +C G + +G+ + + L+ + S
Sbjct: 247 MEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGS 306
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ + L A+ +M N V W A
Sbjct: 307 ALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTA 338
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/407 (36%), Positives = 227/407 (55%), Gaps = 18/407 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + M ++ L+ D+ LS+ + N+ G AIR G+ A+V++GSSL
Sbjct: 178 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 237
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC + D+ +VF +P + +SW +IIA Q D L+ ++ M + ++PN
Sbjct: 238 IDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNH 297
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+F+SI+ AC L G+ H IR F + +A++L+ MY KCGN+ A ++F+
Sbjct: 298 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDK 357
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M D+VSW +MI GYA HG A AI LF+ M + VKP+ + F+ V+++C H GLV+E
Sbjct: 358 MELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEA 417
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
YF+SM + + + P L+HY+ V DLLGR G LEEA +FI M I P +W
Sbjct: 418 WKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACR 477
Query: 408 --------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
E +L ++P+ +V L+N+Y+ W A ++R M+DKG+K P C
Sbjct: 478 VHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPAC 537
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
SWIEI N V+ F A DKS+ I L L++QM+ GYV + E
Sbjct: 538 SWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTE 584
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
KVFE MP R++VSW +I+ AQ + L + R M N+ L P+ FT +S+L
Sbjct: 151 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYV 210
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L +G+ H IR G+ + + + +SLI MY KC V+++ VF + D +SWNS+IA
Sbjct: 211 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 270
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G Q+G+ + F++M+ ++KP+ ++F ++ +C H + GK + +
Sbjct: 271 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 330
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S +VD+ + G + AR +M +Y + V W A
Sbjct: 331 NVFIASALVDMYAKCGNIRTARWIFDKMELY-DMVSWTA 368
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 225/405 (55%), Gaps = 18/405 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ S+ + L +E L V+ + L+ + S S LA + GFI + +V + L
Sbjct: 293 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 352
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I Y KC + DA +VFEE ++++ T++I A +Q + ++L+ M LEP+
Sbjct: 353 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 412
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F +S+L+AC A QG+ H I+ F S N+L+ Y KCG++E+A F++
Sbjct: 413 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 472
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ + +VSW++MI G AQHG RA++LF M+ + + P+ IT V+ +C H GLV+E
Sbjct: 473 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 532
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
K YF+SM + G+ +HYSC++DLLGRAG L++A + + MP NA +W
Sbjct: 533 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASR 592
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAE +LEPE + THV LAN YA W++ A+VRKLMKD +K P
Sbjct: 593 VHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAM 652
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
SW+E+ + V+ F DKS+ EI LD L D M GY+P V
Sbjct: 653 SWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNV 697
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 137/259 (52%), Gaps = 6/259 (2%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAIIAAFA 212
GA +A+ TGF ++V+V ++L+ +Y + DA +VF+E RN VSW +++A+
Sbjct: 26 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 85
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ Q ++++ M S ++P +F F+ +++ACTGS + GR H +RMG+ +
Sbjct: 86 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 145
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
AN+L+ MY K G V+ A +F M D+VSWN++I+G +G RAI+L +M
Sbjct: 146 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 205
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV--VDLLGRAGLLEE 390
+ P+ ++ +C G + G+ M K + D Y V VD+ + L++
Sbjct: 206 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK--ANADSDDYIGVGLVDMYAKNHFLDD 263
Query: 391 ARDFIKQMPIYPNAVIWEA 409
A M + + ++W A
Sbjct: 264 AMKVFDWMS-HRDLILWNA 281
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 108/209 (51%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S V +C +RNI G + +R G+ +V+ ++L+ +Y K + A +FE+MP
Sbjct: 112 FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP 171
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VVSW A+I+ +EL M++S L PN F +SIL AC G+GA GR
Sbjct: 172 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQ 231
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ S + L+ MY K +++A+ VF+ M +D++ WN++I+G + G
Sbjct: 232 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGR 291
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISS 346
A +F + K+ + + T V+ S
Sbjct: 292 HDEAFSIFYGLRKEGLGVNRTTLAAVLKS 320
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 139/323 (43%), Gaps = 16/323 (4%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS----MHHDLHR----------ERLKVDASFLSTAVTSCG 146
+S +F+++ D+ VV LIS HD HR L + LS+ + +C
Sbjct: 163 ASVIFEKMPDSDVVSWNALISGCVLNGHD-HRAIELLLQMKSSGLVPNVFMLSSILKACA 221
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
G I+ ++ Y+G L+ +Y+K + DA KVF+ M R+++ W A
Sbjct: 222 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNA 281
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I+ + + D ++ +R L N T ++L + A R H ++G
Sbjct: 282 LISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIG 341
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
F V N LI Y KC + +A+ VF DI++ SMI +Q AI LF
Sbjct: 342 FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFM 401
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
EM+++ ++PD ++++C E+GK + K + + +V + G
Sbjct: 402 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCG 461
Query: 387 LLEEARDFIKQMPIYPNAVIWEA 409
+E+A +P V W A
Sbjct: 462 SIEDAELAFSSLP-ERGVVSWSA 483
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 221/360 (61%), Gaps = 19/360 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+T + + VG++L+ Y K IDA KVFE + +++++W+A++A +AQ + +
Sbjct: 420 IKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAA 479
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTG-SGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+L+ + ++PN+FTF+S+++AC + A QG+ H I+M + + V+++L++M
Sbjct: 480 KLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTM 539
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K GN++ A VF +D+VSWNSMI+GY+QHG A +A+++F+EM K+ + DA+TF
Sbjct: 540 YAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTF 599
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+GVI++C H GLVE+G+ YF+SM H + P + HYSC++DL RAG+LE+A I +MP
Sbjct: 600 IGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMP 659
Query: 400 IYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
P A +W AAE + L+PE +A +V L+N+YA W +
Sbjct: 660 FPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTN 719
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VRKLM + +K PG SWIE+ N Y F A D ++ ++I L L ++K GY P+
Sbjct: 720 VRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPD 779
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 122/217 (56%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ D S LS C + + + G C ++ G + +V VG+SL+ +Y K + D
Sbjct: 89 LQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGR 148
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF+EM RNVVSWT+++A ++ EL+ M+ + PN +T +++++A G
Sbjct: 149 RVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEG 208
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+G G H ++ GF I V NSLIS+Y + G + +A VF+ M +D V+WNSMIA
Sbjct: 209 VVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIA 268
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
GY ++G + ++F +M VKP +TF VI SC
Sbjct: 269 GYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSC 305
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 136/262 (51%), Gaps = 6/262 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + SC S R + QC A+++GF + V ++L+ SKC+ + DA +F M
Sbjct: 298 FASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLME 357
Query: 198 V-RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+NVVSWTA+I+ Q D + L+ MR ++PN FT+++IL+
Sbjct: 358 EGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFV----S 413
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H + I+ + V +L+ Y K GN +AV VF + KD+++W++M+AGYAQ G
Sbjct: 414 EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTG 473
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH-GGLVEEGKVYFDSMAKHGLKPELDHY 375
A LF +++K+ +KP+ TF VI++C E+GK + K L L
Sbjct: 474 ETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVS 533
Query: 376 SCVVDLLGRAGLLEEARDFIKQ 397
S +V + + G ++ A + K+
Sbjct: 534 SALVTMYAKRGNIDSAHEVFKR 555
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 121/223 (54%), Gaps = 3/223 (1%)
Query: 189 AYKVFEEMPVR--NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC 246
A+ +F+++P R + ++ +++++ Q L L+ + +S L+P++ T + + + C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
GS GR HCQ ++ G ++ V SL+ MY K NV + VF+ M +++VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
S++AGY+ +GL +LF +M + V P+ T VI++ + G+V G + KH
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G + + ++ ++ L R G+L +ARD +M I + V W +
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEI-RDWVTWNS 265
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGS-TRNIRGGAPYQCLAIRTGFIANVYVG 173
+ E+ + H L +E +K + S+ + +C S T G + AI+ + V
Sbjct: 474 ETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVS 533
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
S+L+T+Y+K I A++VF+ R++VSW ++I+ ++Q Q LE++ M+ ++
Sbjct: 534 SALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMD 593
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVY 292
+ TF +++ACT +G + +G+ I + ++ + +I +Y + G +E+A+
Sbjct: 594 VDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMG 653
Query: 293 VFNNM 297
+ N M
Sbjct: 654 IINEM 658
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 238/433 (54%), Gaps = 35/433 (8%)
Query: 97 STFGSSN----VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLS 139
S FG SN +F + + VV +IS + + +K D+ ++
Sbjct: 388 SKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMA 447
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
+ +++C + G I++G +V+V SSL+ +YSK A +F +MP++
Sbjct: 448 SIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK 507
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
N+V+W +II+ + + D+ + L+ + + L P+ +FTS+L+A + AL +G+S H
Sbjct: 508 NLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVH 567
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+R+ +QV N+LI MY KCG ++ A ++F + K++V+WNSMI GY HG
Sbjct: 568 GYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECS 627
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCV 378
+AI+LF+EM +KPD +TFL ++SSC H GL+EEG F+ M K G++P ++HY +
Sbjct: 628 KAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNI 687
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECA 421
VDL GRAG L +A F+K MP+ P+ IW E ++LL +EP
Sbjct: 688 VDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKG 747
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
+ +VQL NLY WD+ A +R MK+KGLK PGCSWIE+ N V F + D S+ +
Sbjct: 748 SNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITT 807
Query: 482 EILPVLDFLVDQM 494
EI L L M
Sbjct: 808 EIYDTLSSLKRNM 820
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 149/281 (53%), Gaps = 1/281 (0%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E +KV +S + +++CG + G C AI+ GF + YV +SL+T+Y KC++I
Sbjct: 235 ENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIES 294
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A KVF E+P + + W A+I+A+ L +Y+ M+ + + FT ++L++ +
Sbjct: 295 AEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSM 354
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+G GR H + ++ S I + ++L++MY K G+ A +F+ M +D+V+W S+
Sbjct: 355 AGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSV 414
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I+G+ Q+ A+D F M VKPD+ +IS+C V+ G + K GL
Sbjct: 415 ISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGL 474
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++ S ++D+ + G E A + MP+ N V W +
Sbjct: 475 QLDVFVASSLLDMYSKFGFPERAGNIFSDMPL-KNLVAWNS 514
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
++ ++LI Y KC +A +F+++ R N+V+W +I F + + LE Y + +
Sbjct: 175 FLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKT 234
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
++ +FT LSAC + G+ HC I++GF V SL++MY KC +E
Sbjct: 235 ENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIES 294
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A VFN + K+I WN++I+ Y +G A A+ ++++M V D+ T L V++S
Sbjct: 295 AEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSM 354
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
GL + G++ + K L+ + S ++ + + G
Sbjct: 355 AGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFG 391
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 30/266 (11%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP---- 197
+ +C S N++ G I TG ++ Y+ SSLI +Y KC DA KVF+++P
Sbjct: 60 LKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGV 119
Query: 198 -VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
V +V W +II + + Q++ + + M++S +G+
Sbjct: 120 SVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSS--------------------GYKEGK 159
Query: 257 SAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYA 313
H +R + F +++ A LI Y KCG EA Y+F + + +IV+WN MI G+
Sbjct: 160 QIHSYIVRNMLNFDPFLETA--LIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFG 217
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
++GL +++ + + VK + +F +S+C G V GK K G + +
Sbjct: 218 ENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPY 277
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMP 399
++ ++ + G+ ++E A ++P
Sbjct: 278 VHTSLLTMYGKCQMIESAEKVFNEVP 303
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 28/205 (13%)
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I + Q+ Q L+LY S + FT+ S+L AC L G++ H I G
Sbjct: 28 IKSLVQQRQYIEALKLYT---KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-----DIVSWNSMIAGYAQHGLAVRAI 322
S + +SLI++Y KCG +AV VF+ + D+ WNS+I GY + G
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFG------ 138
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
EE M Q G + S + +EGK + ++ L + + ++D
Sbjct: 139 -QLEEGMVQ---------FGRMQSSGY----KEGKQIHSYIVRNMLNFDPFLETALIDTY 184
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIW 407
+ G EAR K++ N V W
Sbjct: 185 FKCGRPTEARYLFKKLKDRSNIVAW 209
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 234/403 (58%), Gaps = 19/403 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + +++ + L D + +C + I G ++TG+ +V+VG++L
Sbjct: 158 EAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAAL 217
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC + A +VF+++ VR+ V W +++AA++Q D CL L M + L P +
Sbjct: 218 IDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTE 277
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T + +SA + AL QGR H + R F S+ +V +L+ MY KCG+V A +F
Sbjct: 278 ATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFER 337
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ K +VSWN+MI GYA HG A A+DLFEE M + KPD ITF+GV+S+C HGGL+EEG
Sbjct: 338 LGVKRVVSWNAMITGYAMHGHATEALDLFEE-MNRVAKPDHITFVGVLSACSHGGLLEEG 396
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
++F++M + + + P + HY+C+VDLLG +G L+EA + I QM + P++ +W
Sbjct: 397 WMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCK 456
Query: 408 --------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
E A RL+ LEP+ A +V L+N+YA W+ A++RKLM D+ LK + C
Sbjct: 457 IHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIAC 516
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
SWIE+ N V+ F + D S+ EI L+ + MK GY P
Sbjct: 517 SWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSP 559
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 13/277 (4%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ + SC + + I+ G GF + + + L+ LY C + A +F+ +P
Sbjct: 79 ASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK 138
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
N+ W +I +A + ++LY M + L P++FTF +L AC A+ GR
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H ++ G+ + V +LI MY KCG V A VF+ + +D V WNSM+A Y+Q+G
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHP 258
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL--KPELDHY- 375
+ L EM+ ++P T + IS+ + +G+ HGL + E + +
Sbjct: 259 DACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGR------ELHGLSWRQEFESHD 312
Query: 376 ---SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD+ + G + AR+ +++ + V W A
Sbjct: 313 KVKTALVDMYAKCGSVRVARNLFERLGV-KRVVSWNA 348
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
++ L P + S+L +C A+ G+ H Q GF +A L+++YC C ++
Sbjct: 67 ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
A +F+ + +I WN +I GYA +G A+ L+ +M + PD TF V+ +C
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+E G+ + + + G + ++ + ++D+ + G + AR+ ++ + +AV+W
Sbjct: 187 AALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI-LVRDAVLW 245
Query: 408 EA 409
+
Sbjct: 246 NS 247
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 245/417 (58%), Gaps = 32/417 (7%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ ++ + +K D ++A+++C + + G + +G+ ++ +G++L++L
Sbjct: 524 LNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSL 583
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y++C + +AY F+++ ++ VSW ++++ FAQ + L ++ M + LE N FTF
Sbjct: 584 YARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTF 643
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S +SA + G+ H + G+ S +V+N+LI++Y KCG +++
Sbjct: 644 GSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD---------- 693
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+SWNSMI GY+QHG A+ LFE+M + V P+ +TF+GV+S+C H GLV+EG Y
Sbjct: 694 ---ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISY 750
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F SM++ H L P+ +HY+CVVDLLGR+GLL A+ F+++MPI P+A++W
Sbjct: 751 FRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHK 810
Query: 408 -----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
E A S LL LEP+ +AT+V ++N+YA WD R R++MKD+G+K PG SW+
Sbjct: 811 NIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWV 870
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEP 518
E+ N V+ F A D+++ R I L L + GYVP + + DA ++ +P
Sbjct: 871 EVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCN-SLLSDAEIRQKDP 926
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 132/229 (57%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++TGF NVYV S LI +Y+K + A K+F + +VVSWTA+IA + Q + L
Sbjct: 465 LKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEAL 524
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
L++ M++ ++ ++ F S +SAC G AL QGR H Q+ G+ + + N+L+S+Y
Sbjct: 525 NLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLY 584
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+CG V EA F+ ++ KD VSWNS+++G+AQ G A+++F +M K ++ ++ TF
Sbjct: 585 ARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFG 644
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+S+ + V GK + K G E + + ++ L + G +++
Sbjct: 645 SAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD 693
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 16/294 (5%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+ + +++ ++ + K D +++ +++C S + G + AI+ G +++ V S
Sbjct: 333 INRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGS 392
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
L+ LY KC I A++ F + Q ++ +++ M+ + PN
Sbjct: 393 LLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPN 437
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
FT+ SIL CT GA G H Q ++ GF + V++ LI MY K G ++ A+ +F
Sbjct: 438 QFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFR 497
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ D+VSW +MIAGY QH A++LF+EM Q +K D I F IS+C +++
Sbjct: 498 RLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQ 557
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ G +L + +V L R G + EA Q+ N V W +
Sbjct: 558 GRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDN-VSWNS 610
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 131/268 (48%), Gaps = 15/268 (5%)
Query: 129 ERLKVDASFLSTAVTSC-GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
+ ++ D + + C G+ + R I +GF ++ ++ + LI LY K +
Sbjct: 157 KNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLS 216
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A KVFE + R+ VSW A+I+ +Q + + L+ + +LSACT
Sbjct: 217 SAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACT 262
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G+ H ++ GF S V N+L+++Y + GN+ A +F+ M +D VS+NS
Sbjct: 263 KVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNS 322
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
+I+G AQ G RA+ LF++M KPD +T ++S+C G + GK + K G
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAG 382
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFI 395
+ ++ ++DL + ++ A +F
Sbjct: 383 MTSDIVVEGSLLDLYVKCSDIKTAHEFF 410
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 15/229 (6%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
Y G LI Y + A VF+EMP+R++ W I F E + L+R M
Sbjct: 98 YDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTK 157
Query: 231 MLEPNDFTFTSILSACTGSG-ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
+E ++ F +L C+G+ + H +TI GF S + N LI +Y K G +
Sbjct: 158 NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A VF N+ +D VSW +MI+G +Q+G A+ LF ++ V+S+C
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTK 263
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
E GK + K G E + +V L R+G L A M
Sbjct: 264 VEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCM 312
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 233/414 (56%), Gaps = 19/414 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D +K ++ + + + + +D L + +++C + + G ++ GF ++G+
Sbjct: 257 DFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGN 316
Query: 175 SLITLYSKCRVIIDAYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+L +YSK ++ A VF+ ++VS TAII + + Q++ L + +R +E
Sbjct: 317 ALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIE 376
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN+FTFTS++ AC L G H Q ++ F V+++L+ MY KCG + ++ +
Sbjct: 377 PNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQL 436
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ + D ++WN+++ ++QHGL AI+ F M+ + +KP+A+TF+ ++ C H G+V
Sbjct: 437 FDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMV 496
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----- 407
E+G YF SM K +G+ P+ +HYSCV+DLLGRAG L+EA DFI MP PN W
Sbjct: 497 EDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLG 556
Query: 408 ------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
AA+ + LEPE + HV L+N+YA + W+ +RK++KD +
Sbjct: 557 ACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKL 616
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
PG SW++I N + F ED S+ + EI LD L+DQ+K +GYVP+ +D
Sbjct: 617 PGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLID 670
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 135/272 (49%), Gaps = 4/272 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ + +C S I+ G CL ++ GF ++VGS+L +YSKC + DA K FEEMP
Sbjct: 179 LSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP 238
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ V WT++I F + L Y M + + S LSAC+ A G+S
Sbjct: 239 CKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKS 298
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK--DIVSWNSMIAGYAQH 315
H +++GF + N+L MY K G++ A VF +H IVS ++I GY +
Sbjct: 299 LHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVF-QIHSDCISIVSLTAIIDGYVEM 357
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
+A+ F ++ ++ ++P+ TF +I +C + +E G + K K +
Sbjct: 358 DQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS 417
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
S +VD+ G+ GL + + ++ P+ + W
Sbjct: 418 STLVDMYGKCGLFDHSIQLFDEIE-NPDEIAW 448
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 124/260 (47%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D ++ + + T+ + G + IR G + N ++ + + LYSKC + K+F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
++M RN+VSWT+II FA + L + MR F +S+L ACT GA+
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G HC ++ GF + V ++L MY KCG + +A F M KD V W SMI G+
Sbjct: 194 FGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFV 253
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
++G +A+ + +M+ V D +S+C GK ++ K G + E
Sbjct: 254 KNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETF 313
Query: 374 HYSCVVDLLGRAGLLEEARD 393
+ + D+ ++G + A +
Sbjct: 314 IGNALTDMYSKSGDMVSASN 333
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L +G+ H IR G ++N +++Y KCG ++ + +F+ M +++VSW S+I G
Sbjct: 91 LNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITG 150
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+A + A+ F +M + V+ +C G ++ G + K G E
Sbjct: 151 FAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCE 210
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L S + D+ + G L +A ++MP +AV+W +
Sbjct: 211 LFVGSNLTDMYSKCGELSDACKAFEEMPC-KDAVLWTS 247
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 250/462 (54%), Gaps = 40/462 (8%)
Query: 82 HLDSQKFNHD----------FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH--HDLHRE 129
HL S +F D + S + NVFDQ+ +V LI+ + +D+ E
Sbjct: 76 HLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVE 135
Query: 130 -----------RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
R K + ++ + + G+ + G LA++ G+ +VYVGS+L+
Sbjct: 136 AIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLD 195
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y++C + A VF+++ +N VSW A+I+ FA++ + L + M + E FT
Sbjct: 196 MYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFT 255
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
++S+ S+ GAL QG+ H I+ V N+L+ MY K G++ +A VF+ +
Sbjct: 256 YSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVD 315
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
KD+V+WNSM+ +AQ+GL A+ FEEM K V + ITFL ++++C HGGLV+EGK
Sbjct: 316 NKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKR 375
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
YF+ M ++ L+PE+DHY VV LLGRAGLL A FI +MP+ P A +W
Sbjct: 376 YFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHK 435
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AA+ L+P+ + V L N+YA WD AARVR +MK G+K P CSW+
Sbjct: 436 NAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWV 495
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
E+ N V+ F A D ++ + EI + + +++ GYVP++
Sbjct: 496 EMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDM 537
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 231/404 (57%), Gaps = 19/404 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E IS++H + LK D L + +C + I G IR+G+ +V+VG++L
Sbjct: 141 ETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAAL 200
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC ++DA VF+++ R+ V W +++AA+AQ D L L M + P +
Sbjct: 201 VDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTE 260
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T +++S+ L GR H R GF +V +LI MY KCG+V+ A +F
Sbjct: 261 ATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFER 320
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ K +VSWN++I GYA HGLAV A+DLFE MMK+ +PD ITF+G +++C G L++EG
Sbjct: 321 LREKRVVSWNAIITGYAMHGLAVEALDLFERMMKE-AQPDHITFVGALAACSRGRLLDEG 379
Query: 357 KVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
+ ++ M + + P ++HY+C+VDLLG G L+EA D I+QM + P++ +W
Sbjct: 380 RALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCK 439
Query: 408 --------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
E A +L+ LEP+ + +V LAN+YA W+ AR+R+LM DKG+K N C
Sbjct: 440 THGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIAC 499
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SWIE+ N VY F + D S+ I L L M+ GYVP+
Sbjct: 500 SWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPD 543
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 131/255 (51%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+ ++ + SC S + + G + G N+ + + L+ YS C + +A+ +F+++
Sbjct: 60 YYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKI 119
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P N+ W +I A+A + + LY M L+P++FT +L AC+ +G+GR
Sbjct: 120 PKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGR 179
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H + IR G+ + V +L+ MY KCG V +A +VF+ + +D V WNSM+A YAQ+G
Sbjct: 180 VIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNG 239
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
++ L EM + V+P T + VISS + G+ +HG + +
Sbjct: 240 HPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKT 299
Query: 377 CVVDLLGRAGLLEEA 391
++D+ + G ++ A
Sbjct: 300 ALIDMYAKCGSVKVA 314
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 93/175 (53%), Gaps = 1/175 (0%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N + + S+L +C + AL G+ H + ++G + +A L++ Y C ++ A ++F
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ + ++ WN +I YA +G AI L+ +M++ +KPD T V+ +C +
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
EG+V + + + G + ++ + +VD+ + G + +AR ++ + +AV+W +
Sbjct: 177 EGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNS 230
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 238/436 (54%), Gaps = 37/436 (8%)
Query: 104 VFDQLLDTPVVDVEKLIS----MHH-----DLHRERLKVDASF------LSTAVTSCGST 148
VFD++ +V +IS M H L RE + +A F L + + +CG
Sbjct: 184 VFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMM--EAGFQPNEMSLVSVLGACGEL 241
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+++ G + + N ++GS+LI +Y KC ++ A ++F+ M ++ V+W A+I
Sbjct: 242 GDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMI 301
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+AQ + ++L++ MR S P+ T ILSAC GAL G+ GF
Sbjct: 302 TGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQ 361
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
+ V +L+ MY KCG+++ A VF M K+ VSWN+MI+ A HG A A+ LF+ M
Sbjct: 362 DDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSM 421
Query: 329 MKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRA 385
M + V P+ ITF+GV+S+C H GLV+EG+ F M+ GL P+++HYSC+VDL RA
Sbjct: 422 MNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRA 481
Query: 386 GLLEEARDFIKQMPIYPNAVI----WEAAESR-------------LLLEPECAATHVQLA 428
G LEEA DF+ MP P+ VI A + R L LEP + +V +
Sbjct: 482 GHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISS 541
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
LYA +R WD +AR+R LMK KG+ PGCSWI+I + ++ F A D + EI +LD
Sbjct: 542 KLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILD 601
Query: 489 FLVDQMKTLGYVPEVH 504
L+D ++ GY+P +
Sbjct: 602 LLIDDLRREGYIPNAN 617
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 145/271 (53%), Gaps = 1/271 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C + + G C IR G + +V SLIT+Y++C + DA KVF+E+ +++VS
Sbjct: 136 ACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVS 195
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W ++I+ +++ + L+R M + +PN+ + S+L AC G L G +
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ ++LI MY KCG++ A +F++M KD V+WN+MI GYAQ+G++ AI
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIK 315
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
LF++M PD IT +G++S+C G ++ GK ++ G + ++ + +VD+
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYA 375
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ G L+ A MP N V W A S L
Sbjct: 376 KCGSLDNAFRVFYGMP-NKNEVSWNAMISAL 405
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 203 SWTAIIAAFAQEW-QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
S+ +I + W + + LE Y M+ L+PN+ T+ + AC+ A+ GR HC
Sbjct: 93 SFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCS 152
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
IR G V++SLI+MY +CG + +A VF+ + KD+VSWNSMI+GY++ A A
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ LF EMM+ +P+ ++ + V+ +C G ++ G + + ++ + S ++ +
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ G L AR M + V W A
Sbjct: 273 YGKCGDLVSARRIFDSMK-KKDKVTWNA 299
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 209/361 (57%), Gaps = 18/361 (4%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+R G + V S+L +Y KC I +A +F++ R+VVSWTA+I + +E + +
Sbjct: 249 LRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGF 308
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
L+ + S + PN+FTF+ +L+AC A G+ H R+GF A++L+ MY
Sbjct: 309 ALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMY 368
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCGN++ A VFN M D+VSW S+I+GYAQ+G A+ FE ++K +PD ITF+
Sbjct: 369 TKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFV 428
Query: 342 GVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
GV+S+C H GLV++G YFDS+ KHGL DHY+C++DLL R+G L+EA D I +MPI
Sbjct: 429 GVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPI 488
Query: 401 YPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
P+ +W AAE+ +EPE AT+ LAN+YA W A V
Sbjct: 489 EPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEV 548
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
RK+M +G+ PG SWIEI V+ F D S+ + EI L L +MK GYVP+
Sbjct: 549 RKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDT 608
Query: 504 H 504
+
Sbjct: 609 N 609
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 140/305 (45%), Gaps = 33/305 (10%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
A+ ST + C R + G +GF+ V + + ++ +Y KC +++A ++F+
Sbjct: 89 AATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFD 148
Query: 195 EMPVRNV-------------------------------VSWTAIIAAFAQEWQVDMCLEL 223
EM R++ SWTA+ + + + Q + LEL
Sbjct: 149 EMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALEL 208
Query: 224 YR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
+R M R+ + N FT +S L+A +L G+ H +R+G V ++L MY
Sbjct: 209 FRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYG 268
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG++ EA ++F+ +D+VSW +MI Y + G LF +++K + P+ TF G
Sbjct: 269 KCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSG 328
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
V+++C E GK M + G P S +V + + G ++ AR MP P
Sbjct: 329 VLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMP-RP 387
Query: 403 NAVIW 407
+ V W
Sbjct: 388 DLVSW 392
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T++++L C AL +G H T GF + ++N ++ MY KC ++ A +
Sbjct: 87 PSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRL 146
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M +D+ SWN MI+GYA+ G A LF++M ++ D ++ + S
Sbjct: 147 FDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTER----DNFSWTAMTSGYVRHDQH 202
Query: 354 EEGKVYFDSMAKH 366
EE F +M +H
Sbjct: 203 EEALELFRAMQRH 215
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 220/380 (57%), Gaps = 18/380 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+T + +C +++ G C I++G + VG+SLI++Y+KC ++ +A +EM
Sbjct: 315 LATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMI 374
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ VS++AII+ Q + L ++R M++S + P T ++L AC+ AL G
Sbjct: 375 AKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTC 434
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H T+ GF + + N++I MY KCG + + +F+ M +DI+SWN+MI GY HGL
Sbjct: 435 CHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGL 494
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYS 376
V A+ LF+E+ +KPD +T + V+S+C H GLV EGK +F SM+++ +KP + HY
Sbjct: 495 CVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYI 554
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+VDLL RAG L+EA FI++MP PN IW A ++ LL PE
Sbjct: 555 CMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPE 614
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
V ++N+Y+ V WD AA +R + + G K +PGCSW+EI V++ F +S+ +
Sbjct: 615 GTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQ 674
Query: 480 LSEILPVLDFLVDQMKTLGY 499
+ I L L+ QMK LGY
Sbjct: 675 SASINKKLQELLVQMKKLGY 694
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 130/266 (48%), Gaps = 1/266 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
++S L + + + G + G IR F NV + ++L+ +Y+KC ++ A K+F
Sbjct: 209 NSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIF 268
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGAL 252
+ +N V W+A+I + + L LY M+ L P T ++L AC L
Sbjct: 269 NTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDL 328
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+G+ HC I+ G V NSLISMY KCG ++ AV + M KD VS++++I+G
Sbjct: 329 KRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGC 388
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+G A +A+ +F +M + P T + ++ +C H ++ G G +
Sbjct: 389 VQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDT 448
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++D+ + G + +R+ +M
Sbjct: 449 SICNAIIDMYSKCGKITISREIFDRM 474
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 149/312 (47%), Gaps = 16/312 (5%)
Query: 103 NVFDQLLDTPVVDVEKLI-----------SMHHDLHRERLKVDASFLSTA--VTSCGSTR 149
+VFDQ+ VV +I S++ LH +L V + + + +C S +
Sbjct: 62 HVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQ 121
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAI 207
++ G A G ++YV ++L+ +Y+KC + A +F + R++V+W A+
Sbjct: 122 ALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAM 181
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
IAAF+ + M+ + + PN T SIL + AL QG++ H IR F
Sbjct: 182 IAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFF 241
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
F + + +L+ MY KC + A +FN ++ K+ V W++MI GY H A+ L+++
Sbjct: 242 FDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDD 301
Query: 328 MM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
M+ + P T ++ +C ++ GK M K G+ + + ++ + + G
Sbjct: 302 MLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCG 361
Query: 387 LLEEARDFIKQM 398
+++ A F+ +M
Sbjct: 362 IMDNAVGFLDEM 373
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 3/223 (1%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF+++P +VV W +I +A + LY M + P +FTF +L AC+
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM--HGKDIVSWN 306
AL GR H +G + V+ +L+ MY KCG++ +A +FN++ +DIV+WN
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+MIA ++ H L + I +M + V P++ T + ++ + + +GK ++
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + ++D+ + LL AR + N V W A
Sbjct: 240 FFFDNVVLQTALLDMYAKCHLLFYARKIFNTVN-KKNDVCWSA 281
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 53/112 (47%)
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A +VF+ + +V WN MI YA G ++I L+ M++ V P TF ++ +
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
C ++ G++ GL +L + ++ + + G L +A+ +
Sbjct: 117 CSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSI 168
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 227/382 (59%), Gaps = 18/382 (4%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
TA C +++R G C RTG + +V S++I +Y KC I++A KVF + +
Sbjct: 235 TAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTK 294
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NVVSWTAI+AA++Q + L + M L PN++TF +L++C G ALG G+ H
Sbjct: 295 NVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLH 354
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+ + GF +I V N+LI+MY K G++E A VF M +D ++W++MI G + HGL
Sbjct: 355 TRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGR 414
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCV 378
A+ +F+EM+ + P +TF+GV+S+C H G V+EG Y + + K G++P ++HY+C+
Sbjct: 415 EALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCI 474
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECA 421
V LL +AG L+EA +F+K P+ + V W + AE L ++P
Sbjct: 475 VGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDV 534
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
T++ L+N+YA + WD ++RKLM+++ +K PG SWIEI N ++ F +E K++ +
Sbjct: 535 GTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESN 594
Query: 482 EILPVLDFLVDQMKTLGYVPEV 503
+I + L+ ++ +GYVP++
Sbjct: 595 QIYEKVQELLTMIRPMGYVPDI 616
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 141/281 (50%), Gaps = 1/281 (0%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+ ++ + +T ++SC + + G A+++G + + YV ++LI +YS+ +
Sbjct: 123 DYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKG 182
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A V+ E+P +V S+ II + LE+ M + + ++ T+ + C+
Sbjct: 183 AMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSH 242
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
L G HC+ R G V++++I MY KCGN+ A VFN + K++VSW ++
Sbjct: 243 LKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAI 302
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+A Y+Q+G A++ F EM + P+ TF +++SC + GK+ + K G
Sbjct: 303 LAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGF 362
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + + ++++ ++G +E A +M I +++ W A
Sbjct: 363 EDHIIVGNALINMYSKSGSIEAAHKVFLEM-ICRDSITWSA 402
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 127/242 (52%), Gaps = 2/242 (0%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MM 227
N+ +SLI LY+KC I+ A +F+ M RNVVSW A++A + V L L++ M+
Sbjct: 61 NIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMI 120
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ PN++ F +I+S+C+ SG + +G H ++ G + V N+LI MY + +V
Sbjct: 121 SVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDV 180
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ A+ V+ + G D+ S+N +I G ++G A+++ + M+ + + D +T++ C
Sbjct: 181 KGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLC 240
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H + G M + G + + S ++D+ G+ G + AR ++ N V W
Sbjct: 241 SHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQT-KNVVSW 299
Query: 408 EA 409
A
Sbjct: 300 TA 301
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ + SC + G ++GF ++ VG++LI +YSK I A+KVF EM
Sbjct: 334 FAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMI 393
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+ ++W+A+I + L +++ M + P+ TF +LSAC G++ +G
Sbjct: 394 CRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFY 453
Query: 258 AHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAG---Y 312
Q ++ G ++ ++ + CK G ++EA + K D+V+W ++++ +
Sbjct: 454 YLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVH 513
Query: 313 AQHGLAVRAIDLFEEM 328
+GL + +L +M
Sbjct: 514 QNYGLGKKVAELVLQM 529
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
+SA T + G+ AH I NSLI++Y KC + A +F+ M +++
Sbjct: 34 VSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNV 93
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEG 356
VSW +++AGY +GL + + LF+ M+ ++P+ F +ISSC G V EG
Sbjct: 94 VSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEG 148
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 232/407 (57%), Gaps = 18/407 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
++ K +S+ + R ++ D + V +C + + G I++G + +VGS
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGS 480
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y KC ++++A K+ + + VSW +II+ F+ + Q + + M + P
Sbjct: 481 ALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIP 540
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+++T+ ++L C + G+ H Q +++ S + +A++L+ MY KCGN++++ +F
Sbjct: 541 DNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMF 600
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+D V+W++MI YA HGL +AI+LFEEM VKP+ F+ V+ +C H G V+
Sbjct: 601 EKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVD 660
Query: 355 EGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
+G YF M H GL P+++HYSC+VDLLGR+G + EA I+ MP + VIW
Sbjct: 661 KGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSN 720
Query: 408 -------EAAE----SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
E AE S L L+P+ ++ +V LAN+YA V W + A++R +MK+ LK P
Sbjct: 721 CKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEP 780
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
GCSWIE+ + V+ F DK++ R EI LVD+MK GYVP++
Sbjct: 781 GCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDI 827
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 152/292 (52%), Gaps = 1/292 (0%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + L R L D LS A+T+C + G LA++ G N+ V ++++
Sbjct: 323 KALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTIL 382
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
+Y KC +++A +FEEM R+ VSW AIIAA Q ++ L L+ M S +EP+DF
Sbjct: 383 DMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDF 442
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T+ S++ AC G AL G H + I+ G V ++L+ MY KCG + EA + +
Sbjct: 443 TYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARL 502
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
K VSWNS+I+G++ + A F +M++ + PD T+ V+ C + +E GK
Sbjct: 503 EEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGK 562
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K L ++ S +VD+ + G ++++R ++ P + V W A
Sbjct: 563 QIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP-KRDYVTWSA 613
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 175/361 (48%), Gaps = 16/361 (4%)
Query: 62 STKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS 121
S+K ++ Q D ++ F + G N F S +FD + + VV L+S
Sbjct: 54 SSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIG-NMGFAQS-LFDSMPERDVVSWNSLLS 111
Query: 122 --MHHDLHRERLKV-----------DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA 168
+H+ ++R+ +++ D + + + +C + G CLAI+ GF
Sbjct: 112 CYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFEN 171
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+V GS+L+ +YSKC+ + DA++VF EMP RN+V W+A+IA + Q + L+L++ M
Sbjct: 172 DVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDML 231
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ + T+ S+ +C G A G H ++ F + + + MY KC +
Sbjct: 232 KVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMF 291
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A VFN + S+N++I GYA+ ++A+D+F+ + + + D I+ G +++C
Sbjct: 292 DAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACS 351
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
EG K GL + + ++D+ G+ G L EA ++M +AV W
Sbjct: 352 VIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEME-RRDAVSWN 410
Query: 409 A 409
A
Sbjct: 411 A 411
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 141/273 (51%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + D+ + + V S ++ SC + G A+++ F + +G++ + +
Sbjct: 224 LKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + DA+KVF +P S+ AII +A++ Q L++++ ++ + L ++ +
Sbjct: 284 YAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISL 343
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+ L+AC+ +G H ++ G I VAN+++ MY KCG + EA +F M
Sbjct: 344 SGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMER 403
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D VSWN++IA + Q+ V+ + LF M++ ++PD T+ V+ +C + G
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEI 463
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ K G+ + S +VD+ G+ G+L EA
Sbjct: 464 HGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAE 496
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 43/308 (13%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S + C + + + G I TGF+ +YV + L+ Y K + A+KVF+ MP
Sbjct: 9 FSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMP 68
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NSMLE----------------- 233
R+V+SW +I +A + L+ M NS+L
Sbjct: 69 QRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128
Query: 234 ------PNDF-TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
P+D+ TF IL AC+G G G HC I+MGF + + ++L+ MY KC
Sbjct: 129 MRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+++A VF M +++V W+++IAGY Q+ + + LF++M+K + T+ V S
Sbjct: 189 LDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV----VDLLGRAGLLEEARDFIKQMPIYP 402
C + G + H LK + + S + +D+ + + +A +P P
Sbjct: 249 CAGLSAFKLGT----QLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPP 304
Query: 403 ----NAVI 406
NA+I
Sbjct: 305 RQSYNAII 312
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 36/206 (17%)
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF+ IL C+ AL G+ H Q I GF I VAN L+ YCK + A VF+
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 297 MHGKDIVSWNSMIAGYA-------------------------------QHGLAVRAIDLF 325
M +D++SWN++I GYA +G+ ++I++F
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEG-KVYFDSMA-KHGLKPELDHYSCVVDLLG 383
M ++ D TF ++ +C G+ + G + +A + G + ++ S +VD+
Sbjct: 127 VRMRSLKIPHDYATFAVILKAC--SGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ L++A ++MP N V W A
Sbjct: 185 KCKKLDDAFRVFREMP-ERNLVCWSA 209
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 219/349 (62%), Gaps = 18/349 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
VG+SLI++Y++ + DA K F+ + +N+VS+ AI+ +A+ + + L+ + ++
Sbjct: 61 VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ + FTF S+LS GA+G+G H + ++ G+ S + N+LISMY +CGN+E A
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VFN M ++++SW SMI G+A+HG A RA+++F +M++ KP+ IT++ V+S+C H G
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240
Query: 352 LVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--- 407
++ EG+ +F+SM K HG+ P ++HY+C+VDLLGR+GLL EA +FI MP+ +A++W
Sbjct: 241 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 300
Query: 408 --------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
AAE L EP+ A ++ L+NL+A W ++RK MK++ L
Sbjct: 301 LGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 360
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
GCSWIE+ N V+RF + S+ + +I LD L ++K +GY+P+
Sbjct: 361 KEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 409
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 214/349 (61%), Gaps = 19/349 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSML 232
+++++ Y ++ A K FE MPVRN+VSW A++A + + D L L+R M+R + +
Sbjct: 178 TAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANV 237
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+PN T +S+L C+ ALG G+ H +++ + V SL+SMYCKCG++ A
Sbjct: 238 QPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACI 297
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F MH +D+V+WN+MI+GYAQHG AI+LFE M + V+P+ ITF+ V+++C H GL
Sbjct: 298 LFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGL 357
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP------------ 399
+ G F+ M + +G++P +DHYSC+VDLL RAG LE A DFI+ MP
Sbjct: 358 CDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLL 417
Query: 400 ----IYPNAVIWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
+Y N E A +L+ +P+ A +VQLAN+YA WD +RVR+ MKD +
Sbjct: 418 AACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVK 477
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
PG SWIEI V++ FR+ D+ + +L I L L ++MK +GYVP++
Sbjct: 478 TPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMKEMGYVPDL 526
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ +AS LS+ + C + + G ++ N+ VG+SL+++Y KC + A
Sbjct: 237 VQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSAC 296
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F EM R+VV+W A+I+ +AQ + L+ M++ +EPN TF +L+AC +G
Sbjct: 297 ILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTG 356
Query: 251 ALGQGRSAHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
G + G + + ++ + C+ G +E AV +M
Sbjct: 357 LCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSM 404
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ +V +++++ SK + +A VF MPVRN VSW A+++ FA + E +
Sbjct: 108 VRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMSTAEEWF-- 165
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
RN+ + + +T+++S Y GN
Sbjct: 166 -RNAPEKEDAVLWTAMVSG-----------------------------------YMDIGN 189
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVIS 345
V +A+ F M +++VSWN+++AGY ++ A A+ LF M+++ V+P+A T V+
Sbjct: 190 VVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLL 249
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
C + + GK K L L + +V + + G L A +M + V
Sbjct: 250 GCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTR-DVV 308
Query: 406 IWEA 409
W A
Sbjct: 309 AWNA 312
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC-GNVEEAVYVFNNMH 298
T+ ++A G L A T R +Y N L++ Y + G + +A ++F+ +
Sbjct: 21 TAAVAAAVRHGDLAGAEEAFVSTPRKTTATY----NCLLAGYARAPGRLADARHLFDRIP 76
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
D+VS+N+++ + G A A LF M + D ++ ++S G VEE KV
Sbjct: 77 TPDVVSYNTLLLCHFASGDADGARRLFASMPVR----DVASWNTMVSGLSKSGAVEEAKV 132
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
F +M ++ +V +G + A ++ + P +AV+W A
Sbjct: 133 VFLAMPVRNSVS----WNAMVSGFACSGDMSTAEEWFRNAPEKEDAVLWTA 179
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 229/374 (61%), Gaps = 22/374 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++T + + VG++L+ Y K + +A KVF + +++V+W+A++A +AQ + + +
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGA-LGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+++ + ++PN+FTF+SIL+ C + A +GQG+ H I+ S + V+++L++M
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K GN+E A VF KD+VSWNSMI+GYAQHG A++A+D+F+EM K++VK D +TF
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+GV ++C H GLVEEG+ YFD M + + P +H SC+VDL RAG LE+A I+ MP
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Query: 400 IYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
+ IW AAE + ++PE +A +V L+N+YA W + A+
Sbjct: 660 NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VRKLM ++ +K PG SWIE+ N Y F A D+S+ +I L+ L ++K LGY P+
Sbjct: 720 VRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 779
Query: 503 VHE--EKVDDASHK 514
+ +DD HK
Sbjct: 780 TSYVLQDIDD-EHK 792
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 163/333 (48%), Gaps = 19/333 (5%)
Query: 99 FGSSNVFDQLLDTPVVDVEKLISMHH----------------DLHRERLKVDASFLSTAV 142
+ + N+FD+ +P D E IS+ ++HR +++D S S+ +
Sbjct: 44 YNAHNLFDK---SPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+ + G C I+ GF+ +V VG+SL+ Y K D KVF+EM RNVV
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
+WT +I+ +A+ D L L+ M+N +PN FTF + L G G+G H
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
++ G I V+NSLI++Y KCGNV +A +F+ K +V+WNSMI+GYA +GL + A+
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
+F M V+ +F VI C + + + S+ K+G + + + ++
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL 415
+ + +A K++ N V W A S L
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 152/286 (53%), Gaps = 7/286 (2%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
+D+E L M + + +++ S ++ + C + + +R C ++ GF+ + +
Sbjct: 275 LDLEAL-GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 174 SSLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
++L+ YSKC ++DA ++F+E+ V NVVSWTA+I+ F Q + ++L+ M+ +
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN+FT++ IL+A + H Q ++ + V +L+ Y K G VEEA
Sbjct: 394 RPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH-GG 351
VF+ + KDIV+W++M+AGYAQ G AI +F E+ K +KP+ TF +++ C
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
+ +GK + K L L S ++ + + G +E A + K+
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRG-GAPYQCLAIRTGFIANVYVG 173
+ E I M +L + +K + S+ + C +T G G + AI++ +++ V
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
S+L+T+Y+K I A +VF+ +++VSW ++I+ +AQ Q L++++ M+ ++
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS-LISMYCKCGNVEEAVY 292
+ TF + +ACT +G + +G +R + + NS ++ +Y + G +E+A+
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 653
Query: 293 VFNNM---HGKDIVSWNSMIAGYAQH 315
V NM G I W +++A H
Sbjct: 654 VIENMPNPAGSTI--WRTILAACRVH 677
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 228/383 (59%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++A ++C + +R G +G+ A++ + ++L+ LY++C +A+ +F E+
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIE 509
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ ++W +I+ F Q L ++ M + + N FTF S +SA + QG+
Sbjct: 510 HKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQ 569
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + ++ G S +VAN+LIS+Y KCG++E+A +F+ M ++ VSWN++I +QHG
Sbjct: 570 VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR 629
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
+ A+DLF++M ++ +KP+ +TF+GV+++C H GLVEEG YF SM+ +GL P DHY+
Sbjct: 630 GLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYA 689
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
CVVD+LGRAG L+ AR F+ +MPI NA+IW AA+ L LEP
Sbjct: 690 CVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPH 749
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+A++V L+N YA W +VRK+MKD+G++ PG SWIE+ N V+ F D+ +
Sbjct: 750 DSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPL 809
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I L L D++ +GY E
Sbjct: 810 SDQIYKFLSELNDRLSKIGYKQE 832
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 141/264 (53%), Gaps = 1/264 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C T I G L+I+ GF +++YV LI +YSK + A K+ E + R+VVS
Sbjct: 355 TCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVS 414
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT++IA + Q + L ++ M++ + P++ S SAC G A+ QG H +
Sbjct: 415 WTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY 474
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + I + N+L+++Y +CG EEA +F + KD ++WN +I+G+ Q L +A+
Sbjct: 475 VSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALM 534
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F +M + K + TF+ IS+ + +++GK K G E + + ++ L G
Sbjct: 535 VFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYG 594
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW 407
+ G +E+A+ +M + N V W
Sbjct: 595 KCGSIEDAKMIFSEMSL-RNEVSW 617
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 4/288 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ D +++ + +C S +++ G ++ G + SL+ LY KC I A+
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F NVV W ++ A+ Q + E++ M+ + + PN FT+ IL CT +G
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTG 360
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ G H +I+ GF S + V+ LI MY K G +++A + + +D+VSW SMIA
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIA 420
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY QH A+ F+EM V PD I S+C + +G + G
Sbjct: 421 GYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAA 480
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQM----PIYPNAVIWEAAESRL 414
++ ++ +V+L R G EEA +++ I N +I +SRL
Sbjct: 481 DISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRL 528
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 131/243 (53%), Gaps = 1/243 (0%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
G A+ +G+ LI LY+K ++ A +VF+E+ R+ VSW A+++ +AQ LY
Sbjct: 73 GLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLY 132
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M + + P + +S+LSACT QGR H Q + F S V N+LI++Y
Sbjct: 133 SQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G+ + A VF +M D V++N++I+G+AQ G A+ +F+EM ++PD +T ++
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
++C G +++GK + K G+ + ++DL + G +E A D I + N
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD-IFNLGDRTNV 311
Query: 405 VIW 407
V+W
Sbjct: 312 VLW 314
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 131/262 (50%), Gaps = 2/262 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ +++C + G + F + +VG++LI LY A +VF +M
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDML 206
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ V++ +I+ AQ + L+++ M+ S L P+ T S+L+AC G L +G+
Sbjct: 207 FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266
Query: 258 AHCQTIRMGF-FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H ++ G F YI SL+ +Y KCG++E A +FN ++V WN M+ Y Q
Sbjct: 267 LHSYLLKAGMSFDYI-TEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQIS 325
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
++ ++F +M + P+ T+ ++ +C G +E G+ K+G + ++
Sbjct: 326 DLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385
Query: 377 CVVDLLGRAGLLEEARDFIKQM 398
++D+ + G L++AR ++ +
Sbjct: 386 VLIDMYSKYGCLDKARKILEML 407
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 239 FTSILSACTGSGA-LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T L AC G G H ++ G + + N LI +Y K G V +A VF +
Sbjct: 45 LTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL 104
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D VSW +M++GYAQ GL A L+ +M V P V+S+C G L +G+
Sbjct: 105 SSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGR 164
Query: 358 VYFDSMAKHGLKPE 371
+ + K E
Sbjct: 165 MIHAQVYKQAFCSE 178
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 219/355 (61%), Gaps = 18/355 (5%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ +V +++IT + K I A K FEEMP++N+V+W A+IA + + Q + L+L++
Sbjct: 158 VRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKR 217
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M S PN + +S+L C+ AL G+ H + I SL+SMYCKCG+
Sbjct: 218 MVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGD 277
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+E+A +F M KD+V+WN+MI+GYAQHG +A+ LF++M + +KPD ITF+ V+S+
Sbjct: 278 LEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSA 337
Query: 347 CRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
C H G V+ G YF+SM + +G++ + DHY+CVVDLLGR G L EA D IK+MP P++
Sbjct: 338 CNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSA 397
Query: 406 IWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMK 448
I+ AA++ L L+PE AA +VQLAN+YA + WD A VR+ MK
Sbjct: 398 IFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMK 457
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
D + PG SWIE+ +VV+ FR+ D+ + L+ I L+ L +M+ GYVP++
Sbjct: 458 DNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDL 512
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 38/248 (15%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
+NV + +IT + + + A +VFE M V+ V+W +++A ++ +++ R +
Sbjct: 3 SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNR---RGKIKVARQL 59
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGR----------SAHCQTIRMGF---------- 267
+ + EP+ F++ +L+ + + R +A T+ GF
Sbjct: 60 FDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQAR 119
Query: 268 --FSYIQVANS-----LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
F + V NS +IS Y + G+++ A +F + +V+W +MI G+ + G
Sbjct: 120 ELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIEL 179
Query: 321 AIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A FEEM MK V +A+ G I +C+ E G F M + G +P S V
Sbjct: 180 AEKYFEEMPMKNLVTWNAM-IAGYIENCQ----AENGLKLFKRMVESGFRPNPSSLSSV- 233
Query: 380 DLLGRAGL 387
LLG + L
Sbjct: 234 -LLGCSNL 240
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 235/440 (53%), Gaps = 52/440 (11%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D E L L LK D L++A+++C + + G +RT F A+ VG+
Sbjct: 220 DNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGN 279
Query: 175 SLITLYSK------CRVIID---------------------------AYKVFEEMPVRNV 201
+LI++Y+K R II+ A ++F + +V
Sbjct: 280 ALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDV 339
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
V+WTA+I + Q + +E+++ M + PN FT ++LSA + +L G+ H
Sbjct: 340 VAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHAS 399
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAVR 320
IR G V N+L +MY K G++ A VFN + +D VSW SMI AQHGL
Sbjct: 400 AIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEE 459
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVV 379
AI+LFE+M+ +KPD IT++GV+S+C HGGLVE+G+ YFD M H + P L HY+C+V
Sbjct: 460 AIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMV 519
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAA 422
DL GRAGLL+EA F++ MP+ P+ + W AAE LL+EP +
Sbjct: 520 DLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSG 579
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
+ LAN+Y+ WD AA++RKLMK +G+K G SW++I N + F ED + + E
Sbjct: 580 AYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDE 639
Query: 483 ILPVLDFLVDQMKTLGYVPE 502
I ++D + ++K +G+ P+
Sbjct: 640 IYKMMDKIWKEIKKMGFAPD 659
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 37/276 (13%)
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
+ + ++T F N ++++ Y+K + A++VF+ +PVR+ VSWT II + Q +
Sbjct: 33 FNEMPVKTTFSWN-----TILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGR 87
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
+ ++++ M + P FT T++L++C +G+ G G+ H +++G + + VANS
Sbjct: 88 FEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANS 147
Query: 277 LISMYCKCGNVEEAVYVFNNMH-------------------------------GKDIVSW 305
L++MY K G+++ A VF+ M +DIVSW
Sbjct: 148 LLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSW 207
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
NSMIAG QHG A+ F ++K +KPD + +S+C + + GK +
Sbjct: 208 NSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIV 267
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ + ++ + ++G +E AR I+Q I
Sbjct: 268 RTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGI 303
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 150/360 (41%), Gaps = 69/360 (19%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E I + D+ ++++ L+ + SC +T + G ++ G A V V +SL
Sbjct: 89 EDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSL 148
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------N 229
+ +Y+K + A VF+ M +RN SW A+I+ +VD+ L + ++ N
Sbjct: 149 LNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWN 208
Query: 230 SM-------------------------LEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
SM L+P+ F+ S LSAC L G+ H +R
Sbjct: 209 SMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVR 268
Query: 265 MGFFSYIQVANSLISMYCKCGNVE---------------------------------EAV 291
F + V N+LISMY K G VE A
Sbjct: 269 TMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPAR 328
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+FN++ D+V+W +MI GY Q+GL AI++F+ M+ + +P++ T ++S+
Sbjct: 329 QIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVT 388
Query: 352 LVEEGKVYFDSMAKHG--LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ GK S + G L P + + + + +AG + AR + + V W +
Sbjct: 389 SLNHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTS 446
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG------ 316
+++G + + N+L+++Y K G +A +FN M K SWN++++GYA+ G
Sbjct: 2 VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61
Query: 317 -----LAVR--------------------AIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+ VR AI +F +M+K +V P T V++SC G
Sbjct: 62 QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAE 411
GK + K GL + + ++++ + G L+ A+ +M + N W A
Sbjct: 122 SRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLR-NTSSWNAMI 180
Query: 412 SRLLLEPECAATHVQLANL 430
S L C + LA
Sbjct: 181 S---LHMNCGRVDLALAQF 196
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 242/433 (55%), Gaps = 50/433 (11%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + + + E + +D L+T ++ C + ++ G L +++G + V +SLI
Sbjct: 354 KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLI 413
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NS 230
+LY+KC + +A VF M R++VSWT++I A++Q + E + M N+
Sbjct: 414 SLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNA 473
Query: 231 ML-------------------------EPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
ML P+ T+ ++ C GA G T++
Sbjct: 474 MLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKA 533
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + VAN+ I+MY KCG + EA +F+ ++GKD+VSWN+MI GY+QHG+ +A F
Sbjct: 534 GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTF 593
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
++M+ + KPD I+++ V+S C H GLV+EGK+YFD M + HG+ P L+H+SC+VDLLGR
Sbjct: 594 DDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGR 653
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEAAESRLLLE-----PECAATHV------------QL 427
AG L EA+D I +MP+ P A +W A S + E AA HV L
Sbjct: 654 AGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLL 713
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
A +Y+ D +A+VRKLM+DKG+K NPG SW+E+ N V+ F+A+D S+ ++ I L
Sbjct: 714 AKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKL 773
Query: 488 DFLVDQMKTLGYV 500
D L++++ LGYV
Sbjct: 774 DELMEKIAHLGYV 786
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 143/261 (54%), Gaps = 5/261 (1%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + + ++HR+ +++D++ ++++T+C ++ G IR+ + YV S+
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI LY+KC +A +VF + RN VSWT +I Q +EL+ MR ++ +
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAID 370
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
F +++S C L GR H ++ G I V+NSLIS+Y KCG+++ A +VF+
Sbjct: 371 QFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFS 430
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+M +DIVSW SMI Y+Q G ++A + F+ M + +AIT+ ++ + G E+
Sbjct: 431 SMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTR----NAITWNAMLGAYIQHGAEED 486
Query: 356 G-KVYFDSMAKHGLKPELDHY 375
G K+Y +++ + P+ Y
Sbjct: 487 GLKMYSAMLSQKDVTPDWVTY 507
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 97/179 (54%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
++ +S++ Y+K I A + FE+M R+VVSW +IAA +Q +V L L M
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 262
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ + T+TS L+AC +LG G+ H + IR VA++LI +Y KCG+ +
Sbjct: 263 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFK 322
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
EA VFN++ ++ VSW +I G Q+ ++++LF +M + + D +IS C
Sbjct: 323 EAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 162/397 (40%), Gaps = 76/397 (19%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV----- 192
L+ A+ SCGS + G + G + V++ ++L+ Y C + DA ++
Sbjct: 7 LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADI 66
Query: 193 ---------------------------FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY- 224
F+ MP R+V SW +++ + Q + LE +
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI----RMGFFSYIQVANSLISM 280
M R+ PN FTF ++ +C GALG R Q + + F+ V +L+ M
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSC---GALGC-RELAPQLLGLFWKFDFWGDPDVETALVDM 182
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
+ +CG V+ A +F+ + I NSM+AGYA+ AI+ FE+M ++ D +++
Sbjct: 183 FVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAER----DVVSW 238
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF----IK 396
+I++ G V E M + G++ + Y+ + R L + I+
Sbjct: 239 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 298
Query: 397 QMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
+P ++P A+ L LYA + +A RV ++D+
Sbjct: 299 SLP---------------QIDPYVASA---LIELYAKCGSFKEAKRVFNSLQDRN----- 335
Query: 457 GCSWIEIMNVVYRFRAEDKS----NTRLSEILPVLDF 489
SW ++ ++ KS N +E++ + F
Sbjct: 336 SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQF 372
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 230/383 (60%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++A++ C +R G +G+ +V + ++L+ LY++C I +A+ FEEM
Sbjct: 449 LASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEME 508
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+++ ++ +++ FAQ + L+++ M S ++ N FTF S LSA + QG+
Sbjct: 509 LKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ 568
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + I+ G +V N+LIS+Y KCG+ E+A F+ M ++ VSWN++I +QHG
Sbjct: 569 IHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGR 628
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYS 376
+ A+DLF++M K+ +KP+ +TF+GV+++C H GLVEEG YF SM+ ++G++P DHY+
Sbjct: 629 GLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYA 688
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
CV+D+ GRAG L+ A+ FI++MPI +A++W AA+ L LEP
Sbjct: 689 CVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPH 748
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+A++V L+N YA W +VRK+M+D+G++ PG SWIE+ NVV+ F D+ +
Sbjct: 749 DSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPL 808
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I L + D++ +GY E
Sbjct: 809 AEQIYNFLAVINDRVAKVGYKQE 831
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 156/294 (53%), Gaps = 2/294 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSC-GSTRNIRGGAPYQCLAIRTGFIANVYVG 173
D K++S+ D R+ + + A+ +C G+ R + A+ G VG
Sbjct: 21 DPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVG 80
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+ LI LYSK +++ A +VFEE+ R+ VSW A+++ +AQ + L LYR M + +
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P + +S+LS+CT + QGR H Q + GF S I V N++I++Y +CG+ A V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F +M +D V++N++I+G+AQ G A+++FEEM + PD +T ++++C G +
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++G + K G+ + ++DL + G +E A I N V+W
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL-VIFNSSDRTNVVLW 313
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 138/264 (52%), Gaps = 1/264 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C TR I G L+++TGF +++YV LI +YSK + A +V E + ++VVS
Sbjct: 354 TCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVS 413
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT++IA + Q L ++ M+ + P++ S +S C G A+ QG H +
Sbjct: 414 WTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY 473
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + + N+L+++Y +CG + EA F M KD ++ N +++G+AQ GL A+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALK 533
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F M + VK + TF+ +S+ + +++GK + K G E + + ++ L G
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYG 593
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW 407
+ G E+A+ +M N V W
Sbjct: 594 KCGSFEDAKMEFSEMS-ERNEVSW 616
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 145/282 (51%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++ +HR + LS+ ++SC G + GF + ++VG+++
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
ITLY +C A +VF +MP R+ V++ +I+ AQ + LE++ M+ S L P+
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T +S+L+AC G L +G H + G S + SL+ +Y KCG+VE A+ +FN+
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
++V WN M+ + Q ++ +LF +M ++P+ T+ ++ +C ++ G
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ K G + ++ ++D+ + G LE+AR ++ +
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + ++ L D +S+ + +C S +++ G + G ++ + SL
Sbjct: 226 EHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LY KC + A +F NVV W ++ AF Q + EL+ M+ + + PN
Sbjct: 286 LDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQ 345
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ IL CT + + G H +++ GF S + V+ LI MY K G +E+A V
Sbjct: 346 FTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEM 405
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ KD+VSW SMIAGY QH A+ F+EM K + PD I IS C + +G
Sbjct: 406 LKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG 465
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ G ++ ++ +V+L R G + EA ++M +
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMEL 509
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 241/461 (52%), Gaps = 69/461 (14%)
Query: 104 VFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGSTRN 150
VFD++ D VV LI+ + R++ D L++ +++C S
Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 151 IRGGAPYQCLAIRTGFIAN-VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV-------- 201
I+ G ++ + N + + ++ + +Y+KC I +A +F+ MP+RNV
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 202 -----------------------VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
VSW A+IA + Q + + L L+ +++ + P ++
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGF-FSY-----IQVANSLISMYCKCGNVEEAVY 292
F +IL AC L G AH ++ GF F I V NSLI MY KCG VEE
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF M +D VSWN+MI G+AQ+G A++LF EM++ KPD IT +GV+S+C H G
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508
Query: 353 VEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-- 409
VEEG+ YF SM + G+ P DHY+C+VDLLGRAG LEEA+ I++MP+ P++VIW +
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Query: 410 ---------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
AE L +EP + +V L+N+YA + W+ VRK M+ +G+
Sbjct: 569 AACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 628
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
PGCSWI+I + F +DKS+ R +I +LD L+ +M+
Sbjct: 629 QPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 142/271 (52%), Gaps = 32/271 (11%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII------------- 208
I++GF +++ + LI YSKC + D +VF++MP RN+ +W +++
Sbjct: 47 IKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEAD 106
Query: 209 ------------------AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+ FAQ + + L + MM N+++F S+LSAC+G
Sbjct: 107 SLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLN 166
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ +G H + F S + + ++L+ MY KCGNV +A VF+ M +++VSWNS+I
Sbjct: 167 DMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLIT 226
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG-LK 369
+ Q+G AV A+D+F+ M++ RV+PD +T VIS+C ++ G+ + K+ L+
Sbjct: 227 CFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
++ + VD+ + ++EAR MPI
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 221/362 (61%), Gaps = 19/362 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+T + + VG++L+ + K I DA KVFE + ++V++W+A++A +AQ + +
Sbjct: 429 IKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAA 488
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTG-SGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+++ + ++PN+FTF SI++ACT + ++ QG+ H I++ + + V++SL+++
Sbjct: 489 KIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTL 548
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K GN+E A +F +D+VSWNSMI+GYAQHG A +A+++FEEM K+ ++ DAITF
Sbjct: 549 YAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITF 608
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+GVIS+C H GLV +G+ YF+ M H + P ++HYSC++DL RAG+L +A D I MP
Sbjct: 609 IGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMP 668
Query: 400 IYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
P A +W AAE + LEP+ +A +V L+N+YA W +
Sbjct: 669 FPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVN 728
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VRKLM + +K PG SWIE+ N Y F A D S+ I L L +++ +GY P+
Sbjct: 729 VRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPD 788
Query: 503 VH 504
+
Sbjct: 789 TN 790
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 161/333 (48%), Gaps = 23/333 (6%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L+R L D+ +S ++ C + N G C ++ G + ++ VG+SL+ +Y+K
Sbjct: 93 LYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGN 152
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ D +VF+EM R+VVSW +++ ++ D EL+ +M+ P+ +T +++++A
Sbjct: 153 VRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAA 212
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
GA+ G H +++GF + V NSLISM K G + +A VF+NM KD VSW
Sbjct: 213 LANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSW 272
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC---RHGGLVEEGKVYFDS 362
NSMIAG+ +G + A + F M KP TF VI SC + GLV +V
Sbjct: 273 NSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLV---RVLHCK 329
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAA 422
K GL + + ++ L + +++A M + V W A S L +
Sbjct: 330 TLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDT-- 387
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
DQA + LM+ +G+K N
Sbjct: 388 ---------------DQAVNLFSLMRREGVKPN 405
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 138/262 (52%), Gaps = 6/262 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM- 196
++ + SC S + + C +++G N V ++L+ +KC+ I DA+ +F M
Sbjct: 307 FASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMH 366
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
V++VVSWTA+I+ + Q D + L+ +MR ++PN FT+++IL+
Sbjct: 367 GVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFI----S 422
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H + I+ + V +L+ + K GN+ +AV VF + KD+++W++M+AGYAQ G
Sbjct: 423 EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAG 482
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH-GGLVEEGKVYFDSMAKHGLKPELDHY 375
A +F ++ ++ +KP+ TF +I++C VE+GK + K L L
Sbjct: 483 ETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVS 542
Query: 376 SCVVDLLGRAGLLEEARDFIKQ 397
S +V L + G +E A + K+
Sbjct: 543 SSLVTLYAKRGNIESAHEIFKR 564
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A ++F++ P+R++ ++ +++ Q L L+ + S L P+ +T + +LS C G
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
S G HCQ ++ G ++ V NSL+ MY K GNV + VF+ M +D+VSWNS+
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ GY+ + + +LF M + +PD T VI++ + G V G + K G
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ E + ++ +L ++G+L +AR M ++V W +
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNME-NKDSVSWNS 274
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 238/436 (54%), Gaps = 37/436 (8%)
Query: 104 VFDQLLDTPVVDVEKLIS----MHH-----DLHRERLKVDASF------LSTAVTSCGST 148
VFD++ +V +IS M H L RE + +A F L + + +CG
Sbjct: 184 VFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMM--EAGFQPNEMSLVSVLGACGEL 241
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+++ G + + N ++GS+LI +Y KC ++ A ++F+ M ++ V+W A+I
Sbjct: 242 GDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMI 301
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+AQ + ++L++ MR S P+ T ILSAC GAL G+ GF
Sbjct: 302 TGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQ 361
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
+ V +L+ MY KCG+++ A VF M K+ VSWN+MI+ A HG A A+ LF+ M
Sbjct: 362 DDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSM 421
Query: 329 MKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRA 385
M + V P+ ITF+GV+S+C H GLV+EG+ F M+ GL P+++HYSC+VDL RA
Sbjct: 422 MNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRA 481
Query: 386 GLLEEARDFIKQMPIYPNAVI----WEAAESR-------------LLLEPECAATHVQLA 428
G LEEA DF+ MP P+ VI A + R L LEP + +V +
Sbjct: 482 GHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISS 541
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
LYA +R WD +AR+R LMK KG+ PGCSWI+I + ++ F A D + EI +LD
Sbjct: 542 KLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILD 601
Query: 489 FLVDQMKTLGYVPEVH 504
L+D ++ GY+P +
Sbjct: 602 LLIDDLRREGYIPNAN 617
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 145/271 (53%), Gaps = 1/271 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C + + G C IR G + +V SLIT+Y++C + DA KVF+E+ +++VS
Sbjct: 136 ACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVS 195
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W ++I+ +++ + L+R M + +PN+ + S+L AC G L G +
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVV 255
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ ++LI MY KCG++ A +F++M KD V+WN+MI GYAQ+G++ AI
Sbjct: 256 ENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIK 315
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
LF++M PD IT +G++S+C G ++ GK ++ G + ++ + +VD+
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYA 375
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ G L+ A MP N V W A S L
Sbjct: 376 KCGSLDNAFRVFYGMP-KKNEVSWNAMISAL 405
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 203 SWTAIIAAFAQEW-QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
S+ +I + W + + LE Y M+ L+PN+ T+ + AC+ A+ GR HC
Sbjct: 93 SFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCS 152
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
IR G V++SLI+MY +CG + +A VF+ + KD+VSWNSMI+GY++ A A
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ LF EMM+ +P+ ++ + V+ +C G ++ G + + ++ + S ++ +
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ G L AR M + V W A
Sbjct: 273 YGKCGDLVSARRIFDSMK-KKDKVTWNA 299
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/413 (36%), Positives = 236/413 (57%), Gaps = 22/413 (5%)
Query: 109 LDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA 168
LD E L+ H L K +S L+ A+T+C + G L ++TG+
Sbjct: 215 LDHNGRSFEALVVFHKML--ASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCF 272
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MM 227
N Y+ +SLI+ Y+ C++I +A +F + RNVV WTA++ + + L++++ MM
Sbjct: 273 NEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMM 332
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
R S+L PN + TS L++C G A+ +GR H ++G S I V+NSL+ MY KCG++
Sbjct: 333 RMSVL-PNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHI 391
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ + VF M K++VSWNS+I G AQHG A+ LF +M++ RV PD IT G++S+C
Sbjct: 392 NDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSAC 451
Query: 348 RHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
H G++ +G+ +F K+ G++ +HYS +VDLLGR G LEEA I MP N ++
Sbjct: 452 GHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMV 511
Query: 407 W-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
W AA+ L L+P C+A + L+NLYA W + +++RK MKD
Sbjct: 512 WLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKD 571
Query: 450 KGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+G+ PG SWI I + + F + D+S+ +I L++L ++K LGYVP+
Sbjct: 572 EGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPD 624
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
DA K+F EMPV++++SW +++ + + M ++ + M E N ++T+I++
Sbjct: 99 DALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMF----DKMSERNVVSWTTIIN--- 151
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G G+ A C R+ + NS++ + G VE+A+ +F M ++++SW S
Sbjct: 152 GLLEFGRVEVAEC-LFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTS 210
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+I G +G + A+ +F +M+ K + T +++C
Sbjct: 211 VIGGLDHNGRSFEALVVFHKMLAS-FKATSSTLACALTAC 249
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
L++ + + I +A +F +M V +T +I +A E +++ L+L+ M L
Sbjct: 56 LLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDL--- 112
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++ S+L C G L + + S+ + N L+ G VE A +F
Sbjct: 113 -ISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEF----GRVEVAECLFR 167
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M KD+ +WNSM+ G+ +G AI+LFE+M + V I++ VI H G E
Sbjct: 168 VMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNV----ISWTSVIGGLDHNGRSFE 223
Query: 356 GKVYFDSM 363
V F M
Sbjct: 224 ALVVFHKM 231
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+N L+S + + G ++EA +FN M + + MI GYA G A+ LF EM +
Sbjct: 53 SNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVK-- 110
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
D I++ ++ C G + FD M++ + ++ +++ L G +E A
Sbjct: 111 --DLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVS----WTTIINGLLEFGRVEVAEC 164
Query: 394 FIKQMP 399
+ MP
Sbjct: 165 LFRVMP 170
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 154/389 (39%), Positives = 224/389 (57%), Gaps = 24/389 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L V S S +R G +R G+ AN++V ++L+ +Y+K + A VF MP
Sbjct: 186 LKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMP 245
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMR----NSMLEPNDFTFTSILSACTGSGALG 253
+N VSW+A+IA FA+ LEL+++M NS+ PN T ++L AC G AL
Sbjct: 246 TKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSV--PNSVTMVNMLQACAGLAALE 303
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
QG+ H +R S + V N+LI+MY +CG V VF+NM +D+VSWNS+I+ Y
Sbjct: 304 QGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYG 363
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPEL 372
HG +AI +FE M+ Q V P I+F+ V+ +C H GLVEEGK+ F+SM +K+ + P +
Sbjct: 364 MHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGM 423
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL- 415
+HY+C+VDLLGRA L EA I+ M P +W E A + L
Sbjct: 424 EHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFE 483
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
LEP A +V LA++YA + W +A V KL++ +GL+ PGCSWIE+ VY F + D+
Sbjct: 484 LEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDE 543
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
N ++ EI +L L ++MK GYVP+ +
Sbjct: 544 HNPQIEEIHALLVKLSNEMKAQGYVPQTN 572
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 130/252 (51%), Gaps = 8/252 (3%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC ++ G + +GF + ++ + LI +Y + I A KVF+E R +
Sbjct: 85 IYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTI 144
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND-FTFTSILSACTGSG----ALGQGR 256
W A+ A A L+LY M N + P+D FT+T +L AC S L +G+
Sbjct: 145 YVWNALFRALAMVGHGKELLDLYIQM-NWIGTPSDRFTYTYVLKACVVSELSVCPLRKGK 203
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H +R G+ + I V +L+ +Y K G+V A VF M K+ VSW++MIA +A++
Sbjct: 204 EIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNE 263
Query: 317 LAVRAIDLFEEMMKQRVK--PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+ ++A++LF+ MM + P+++T + ++ +C +E+GK+ + + L L
Sbjct: 264 MPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPV 323
Query: 375 YSCVVDLLGRAG 386
+ ++ + GR G
Sbjct: 324 LNALITMYGRCG 335
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P TF ++ +C +L G H + GF +A LI+MY + G+++ A+ V
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL- 352
F+ + I WN++ A G +DL+ +M D T+ V+ +C L
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195
Query: 353 ---VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +GK + +HG + + + ++D+ + G + A MP N V W A
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPT-KNFVSWSA 254
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 227/386 (58%), Gaps = 18/386 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+ LK D+ +++ + +C + G I+TG + NV+VGSSLI LYSKC +
Sbjct: 969 DSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEM 1028
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A KVF M N+V+W ++I+ +++ ++ +EL+ +M + + P+ + TS+L A +
Sbjct: 1029 ALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISS 1088
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ +L +G+S H T+R+G S + N+LI MY KCG + A +F M K +++WN M
Sbjct: 1089 TASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLM 1148
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HG 367
I GY HG A+ LF+E+ K PD +TFL +IS+C H G VEEGK +F+ M + +G
Sbjct: 1149 IYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYG 1208
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAA 410
++P+++HY+ +VDLLGRAG LEEA FIK MP ++ IW +A
Sbjct: 1209 IEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSA 1268
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
E L +EPE +T+VQL NLY ++AA++ MK++GL+ PGCSWIE+ ++ F
Sbjct: 1269 EKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEVSDISNVF 1328
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKT 496
+ S+ +EI VL+ L M T
Sbjct: 1329 FSGGSSSPIKAEIFKVLNRLKSNMVT 1354
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 144/282 (51%), Gaps = 5/282 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+K+ ++ + A+ +C + N G C ++ G + YV +SL+++YSKC ++ +A
Sbjct: 767 VKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAE 826
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VF + + + W A++AA+ + LEL+ MR + P+ FT ++++S C+ G
Sbjct: 827 TVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFG 886
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G+S H + + S + ++L+++Y KCG +A VF +M KD+V+W S+I+
Sbjct: 887 LYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLIS 946
Query: 311 GYAQHGLAVRAIDLFEEMM--KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
G ++G A+ +F +M +KPD+ VI++C + G SM K G
Sbjct: 947 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQ 1006
Query: 369 KPELDHYSCVVDLLGRAGLLEEA-RDFIKQMPIYPNAVIWEA 409
+ S ++DL + GL E A + F P N V W +
Sbjct: 1007 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMRP--ENIVAWNS 1046
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 133/271 (49%), Gaps = 3/271 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIR--GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
++ DA LS V+ N R G +R + ++ ++LI +Y K + D
Sbjct: 663 VRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTD 722
Query: 189 AYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A++VF E+ + NVV W +I F + LELY + +++ ++ +FT L AC+
Sbjct: 723 AWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACS 782
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
S GR HC ++MG + V+ SL+SMY KCG V EA VF+ + K + WN+
Sbjct: 783 QSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA 842
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M+A Y ++ A++LF M ++ V PD+ T VIS C GL + GK + K
Sbjct: 843 MVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRP 902
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++ S ++ L + G +A K M
Sbjct: 903 IQSTPAIESALLTLYSKCGCDTDAYLVFKSM 933
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 8/208 (3%)
Query: 208 IAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
I A Q+ + L LY + +S L + FTF S+L AC+ L G++ H I +G
Sbjct: 532 IRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSIIVLG 591
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFN-----NMHGKDIVSWNSMIAGYAQHGLAVRA 321
+ +A SL++MY KCG ++ AV VF+ + +D+ NSMI GY +
Sbjct: 592 WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFKEG 651
Query: 322 IDLFEEMMKQRVKPDAITFLGVISS-CRHGGL-VEEGKVYFDSMAKHGLKPELDHYSCVV 379
+ F M+ V+PDA + V+S C+ G E+GK M ++ L + + ++
Sbjct: 652 VGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALI 711
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIW 407
D+ + GL +A ++ N V+W
Sbjct: 712 DMYFKFGLSTDAWRVFVEIEDKSNVVLW 739
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 112/258 (43%), Gaps = 8/258 (3%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE-----EM 196
+ +C S N+ G I G+ + ++ +SL+ +Y KC + A +VF+ +
Sbjct: 568 LKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGV 627
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ-- 254
R+V ++I + + + + +R M + P+ F+ + ++S G +
Sbjct: 628 SARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRRED 687
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYA 313
G+ H +R + +LI MY K G +A VF + K ++V WN MI G+
Sbjct: 688 GKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFG 747
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ +++L+ VK + +F G + +C G+ + K GL +
Sbjct: 748 GSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPY 807
Query: 374 HYSCVVDLLGRAGLLEEA 391
+ ++ + + G++ EA
Sbjct: 808 VSTSLLSMYSKCGMVGEA 825
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 232/425 (54%), Gaps = 32/425 (7%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L R D + +C G C ++ GF +VYV + LI LY C
Sbjct: 119 LERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 178
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A KVF+EMP R++VSW ++I A + + D L+L+R M+ S EP+ +T S+LSA
Sbjct: 179 LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSA 237
Query: 246 CTGSGALGQGRSAHCQTIR---MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
C G G+L G AH +R + + V NSLI MYCKCG++ A VF M +D+
Sbjct: 238 CAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDL 297
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQR--VKPDAITFLGVISSCRHGGLVEEGKVYF 360
SWN+MI G+A HG A A++ F+ M+ +R V+P+++TF+G++ +C H G V +G+ YF
Sbjct: 298 ASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYF 357
Query: 361 DSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------- 409
D M + + ++P L+HY C+VDL+ RAG + EA D + MP+ P+AVIW +
Sbjct: 358 DMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA 417
Query: 410 ---------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
E C+ +V L+ +YA W+ VRKLM + G++
Sbjct: 418 SVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK 477
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHK 514
PGCS IEI + + F A D S+ + +I L + D+++++GY+P+ + + DA++
Sbjct: 478 EPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATND 537
Query: 515 RTEPF 519
++ +
Sbjct: 538 GSKEY 542
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW-QVDMCLELYR- 225
A +++ ++ L S + A++VF+ + + W +I A A + + + LYR
Sbjct: 58 ATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRK 117
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ P+ TF +L AC +G+ HCQ ++ GF + V N LI +Y CG
Sbjct: 118 MLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 177
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++ A VF+ M + +VSWNSMI + G A+ LF EM + +PD T V+S
Sbjct: 178 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLS 236
Query: 346 SCRHGGLVEEG 356
+C G + G
Sbjct: 237 ACAGLGSLSLG 247
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 210/348 (60%), Gaps = 18/348 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+SLIT YS+ + A +VFE MP RN VSW A+IAA+ Q ++ L+ MR +
Sbjct: 190 TSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVV 249
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ F S+LSACTG GAL QG+ H + G ++A ++I MYCKCG +E+A V
Sbjct: 250 LDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEV 309
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
FN + K I SWN MI G A HG AI+LF+EM ++ V PD ITF+ V+S+C H GLV
Sbjct: 310 FNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLV 369
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--- 409
EEGK YF M + GLKP ++H+ C+VDLLGRAGLLEEAR I +MP+ P+A + A
Sbjct: 370 EEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVG 429
Query: 410 --------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ + LEP + +V LANLYA W+ A+VRKLM D+G+K
Sbjct: 430 ACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKA 489
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
PG S IE + V F A +++ + EI LD +++ ++++GYVP+
Sbjct: 490 PGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDT 537
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 38/293 (12%)
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMPV 198
+ SC + ++ Y IR G A+ +I SK + A +VF+++P
Sbjct: 26 GLDSCSTMAELK---QYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPH 82
Query: 199 RNVVSWTAIIAAFAQEWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ + I + + WQ+ C+ +Y M + + PN FT+ ++ AC A+ +G+
Sbjct: 83 PDAYIYNTIFRGYLR-WQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQ 141
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++ GF + N+LI MY ++E+A VF+NM +D+VSW S+I GY+Q G
Sbjct: 142 IHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGF 201
Query: 318 AVRAIDLFE-------------------------------EMMKQRVKPDAITFLGVISS 346
+A ++FE M + V D ++S+
Sbjct: 202 VDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSA 261
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
C G +E+GK + K G++ + + V+D+ + G LE+A + ++P
Sbjct: 262 CTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELP 314
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 242/433 (55%), Gaps = 50/433 (11%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + + + E + +D L+T ++ C + ++ G L +++G + V +SLI
Sbjct: 354 KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLI 413
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NS 230
+LY+KC + +A VF M R++VSWT++I A++Q + E + M N+
Sbjct: 414 SLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNA 473
Query: 231 ML-------------------------EPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
ML P+ T+ ++ C GA G T++
Sbjct: 474 MLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKA 533
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + VAN+ I+MY KCG + EA +F+ ++GKD+VSWN+MI GY+QHG+ +A F
Sbjct: 534 GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTF 593
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
++M+ + KPD I+++ V+S C H GLV+EGK+YFD M + HG+ P L+H+SC+VDLLGR
Sbjct: 594 DDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGR 653
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEAAESRLLLE-----PECAATHV------------QL 427
AG L EA+D I +MP+ P A +W A S + E AA HV L
Sbjct: 654 AGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLL 713
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
A +Y+ D +A+VRKLM+DKG+K NPG SW+E+ N V+ F+A+D S+ ++ I +
Sbjct: 714 AKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKM 773
Query: 488 DFLVDQMKTLGYV 500
D L++++ LGYV
Sbjct: 774 DELMEKIAHLGYV 786
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 143/261 (54%), Gaps = 5/261 (1%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + + ++HR+ +++D++ ++++T+C ++ G IR+ + YV S+
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI LY+KC +A +VF + RN VSWT +I Q +EL+ MR ++ +
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAID 370
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
F +++S C L GR H ++ G I V+NSLIS+Y KCG+++ A +VF+
Sbjct: 371 QFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFS 430
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+M +DIVSW SMI Y+Q G ++A + F+ M + +AIT+ ++ + G E+
Sbjct: 431 SMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEED 486
Query: 356 G-KVYFDSMAKHGLKPELDHY 375
G K+Y +++ + P+ Y
Sbjct: 487 GLKMYSAMLSQKDVTPDWVTY 507
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 97/179 (54%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
++ +S++ Y+K I A + FE+M R+VVSW +IAA +Q +V L L M
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 262
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ + T+TS L+AC +LG G+ H + IR VA++LI +Y KCG+ +
Sbjct: 263 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFK 322
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
EA VFN++ ++ VSW +I G Q+ ++++LF +M + + D +IS C
Sbjct: 323 EAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 162/397 (40%), Gaps = 76/397 (19%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV----- 192
L+ A+ SCGS + G + G + V++ ++L+ Y C + DA ++
Sbjct: 7 LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 66
Query: 193 ---------------------------FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY- 224
F+ MP R+V SW +++ + Q + LE +
Sbjct: 67 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI----RMGFFSYIQVANSLISM 280
M R+ PN FTF ++ +C GALG R Q + + F+ V +L+ M
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSC---GALGC-RELAPQLLGLFWKFDFWGDPDVETALVDM 182
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
+ +CG V+ A +F+ + I NSM+AGYA+ AI+ FE+M ++ D +++
Sbjct: 183 FVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAER----DVVSW 238
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF----IK 396
+I++ G V E M + G++ + Y+ + R L + I+
Sbjct: 239 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 298
Query: 397 QMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
+P ++P A+ L LYA + +A RV ++D+
Sbjct: 299 SLP---------------QIDPYVASA---LIELYAKCGSFKEAKRVFNSLQDRN----- 335
Query: 457 GCSWIEIMNVVYRFRAEDKS----NTRLSEILPVLDF 489
SW ++ ++ KS N +E++ + F
Sbjct: 336 SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQF 372
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 232/425 (54%), Gaps = 32/425 (7%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L R D + +C G C ++ GF +VYV + LI LY C
Sbjct: 142 LERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 201
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A KVF+EMP R++VSW ++I A + + D L+L+R M+ S EP+ +T S+LSA
Sbjct: 202 LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSA 260
Query: 246 CTGSGALGQGRSAHCQTIR---MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
C G G+L G AH +R + + V NSLI MYCKCG++ A VF M +D+
Sbjct: 261 CAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDL 320
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQR--VKPDAITFLGVISSCRHGGLVEEGKVYF 360
SWN+MI G+A HG A A++ F+ M+ +R V+P+++TF+G++ +C H G V +G+ YF
Sbjct: 321 ASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYF 380
Query: 361 DSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------- 409
D M + + ++P L+HY C+VDL+ RAG + EA D + MP+ P+AVIW +
Sbjct: 381 DMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA 440
Query: 410 ---------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
E C+ +V L+ +YA W+ VRKLM + G++
Sbjct: 441 SVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK 500
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHK 514
PGCS IEI + + F A D S+ + +I L + D+++++GY+P+ + + DA++
Sbjct: 501 EPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATND 560
Query: 515 RTEPF 519
++ +
Sbjct: 561 GSKEY 565
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW-QVDMCLELYR- 225
A +++ ++ L S + A++VF+ + + W +I A A + + + LYR
Sbjct: 81 ATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRK 140
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ P+ TF +L AC +G+ HCQ ++ GF + V N LI +Y CG
Sbjct: 141 MLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 200
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++ A VF+ M + +VSWNSMI + G A+ LF EM + +PD T V+S
Sbjct: 201 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLS 259
Query: 346 SCRHGGLVEEG 356
+C G + G
Sbjct: 260 ACAGLGSLSLG 270
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 248/454 (54%), Gaps = 41/454 (9%)
Query: 97 STFGSSN----VFDQLLDTPVVDVEKLI---SMHHDLHRERL-----------KVDASF- 137
S FG+ N VF Q+ + LI S H L +E + V SF
Sbjct: 35 SPFGNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFT 94
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ + +C G ++ GF ++++V +SL+ Y KC I A KVFEEMP
Sbjct: 95 LAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMP 154
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
VRN+V+WTA+I+ A+ VD +EL+R M+ + ++P+ T S++SAC +GAL G
Sbjct: 155 VRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYW 214
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + + ++++ +L+ MY KCG +E A VF +M KD +W+SMI G+A HGL
Sbjct: 215 LHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGL 274
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A AID F++M++ V PD +TFL V+S+C HGGLV G+ ++ M + G++P ++HY C
Sbjct: 275 AQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGC 334
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPEC 420
VDLL R+GL+EEA M I PNA W + A L LEP
Sbjct: 335 KVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLN 394
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
A ++ ++NLY+ + W++ + +RK+MK+K +K PGCS IE+ VV+ F D+S+ +
Sbjct: 395 AENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEV 454
Query: 481 SEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHK 514
+ ++ + +++ GY P + D HK
Sbjct: 455 KMLREFMEEMSMRVRDSGYRP-----SISDVLHK 483
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 232/425 (54%), Gaps = 32/425 (7%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L R D + +C G C ++ GF +VYV + LI LY C
Sbjct: 199 LERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 258
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A KVF+EMP R++VSW ++I A + + D L+L+R M+ S EP+ +T S+LSA
Sbjct: 259 LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSA 317
Query: 246 CTGSGALGQGRSAHCQTIR---MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
C G G+L G AH +R + + V NSLI MYCKCG++ A VF M +D+
Sbjct: 318 CAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDL 377
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQR--VKPDAITFLGVISSCRHGGLVEEGKVYF 360
SWN+MI G+A HG A A++ F+ M+ +R V+P+++TF+G++ +C H G V +G+ YF
Sbjct: 378 ASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYF 437
Query: 361 DSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------- 409
D M + + ++P L+HY C+VDL+ RAG + EA D + MP+ P+AVIW +
Sbjct: 438 DMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA 497
Query: 410 ---------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
E C+ +V L+ +YA W+ VRKLM + G++
Sbjct: 498 SVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK 557
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHK 514
PGCS IEI + + F A D S+ + +I L + D+++++GY+P+ + + DA++
Sbjct: 558 EPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATND 617
Query: 515 RTEPF 519
++ +
Sbjct: 618 GSKEY 622
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW-QVDMCLELYR- 225
A +++ ++ L S + A++VF+ + + W +I A A + + + LYR
Sbjct: 138 ATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRK 197
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ P+ TF +L AC +G+ HCQ ++ GF + V N LI +Y CG
Sbjct: 198 MLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 257
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++ A VF+ M + +VSWNSMI + G A+ LF EM + +PD T V+S
Sbjct: 258 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLS 316
Query: 346 SCRHGGLVEEG 356
+C G + G
Sbjct: 317 ACAGLGSLSLG 327
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 249/433 (57%), Gaps = 31/433 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFLSTAVTSCGS 147
+ + D + + VV +I+ + H+ +E L+ D L++A+++C
Sbjct: 399 AQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAG 458
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+ + G+ +G+ A+V + + L+ LY++C + +A+ FE + + ++W +
Sbjct: 459 IKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGL 518
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ FAQ + L+++ M + + N FTF S +SA + QG+ H + I+ G+
Sbjct: 519 ISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGY 578
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
S +++N+LIS+Y KCG++E+A F M ++ VSWN++I +QHG + A+DLF++
Sbjct: 579 TSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQ 638
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAG 386
M +Q +KP +TF+GV+++C H GLVEEG YF SM+ +HG+ P DHY+CVVD+LGRAG
Sbjct: 639 MKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAG 698
Query: 387 LLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLAN 429
L+ A+ F+++MPI ++++W AA+ L LEP +A++V L+N
Sbjct: 699 QLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSN 758
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
YA W ++RK+MKD+G++ PG SWIE+ NVV+ F D+ + +I L
Sbjct: 759 AYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSH 818
Query: 490 LVDQMKTLGYVPE 502
L D++ +GY E
Sbjct: 819 LNDRLYKIGYKQE 831
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 2/294 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSC-GSTRNIRGGAPYQCLAIRTGFIANVYVG 173
D EKL+ + R+ + + A + A+ +C GS R AI G +G
Sbjct: 21 DPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIG 80
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+ LI LY+K + A +VFEE+ VR+ VSW A+++ +AQ + + LYR M S +
Sbjct: 81 NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P + +SILSACT + GR H Q + GFFS V N+LIS+Y +C + A V
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F +M D V++N++I+G+AQ G RA+ +F+EM + PD++T ++++C G +
Sbjct: 201 FCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDL 260
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+GK + K G+ + ++DL ++G +EEA N V+W
Sbjct: 261 RKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGD-RTNVVLW 313
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 139/265 (52%), Gaps = 3/265 (1%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C T I G L I+ GF +++YV LI +YSK + A ++ + + ++VVS
Sbjct: 354 TCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVS 413
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT++IA + Q LE ++ M+ + P++ S +SAC G A+ QG H +
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVY 473
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + + + N L+ +Y +CG +EA F + K+ ++WN +I+G+AQ GL A+
Sbjct: 474 VSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALK 533
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F +M + K + TF+ IS+ + +++GK + K G E + + ++ L G
Sbjct: 534 VFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYG 593
Query: 384 RAGLLEEAR-DFIKQMPIYPNAVIW 407
+ G +E+A+ DF + N V W
Sbjct: 594 KCGSIEDAKMDFFEMTK--RNEVSW 616
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 138/275 (50%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + + ++ L D+ +++ + +C + ++R G ++ G + + SL
Sbjct: 226 DRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSL 285
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LY K I +A ++F+ NVV W ++ A+ Q + +++ M + + PN
Sbjct: 286 LDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNK 345
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ +L CT +G +G G H TI+ GF S + V+ LI MY K G +++A + +
Sbjct: 346 FTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDM 405
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ KD+VSW SMIAGY QH A++ F+EM + PD I IS+C V +G
Sbjct: 406 IEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQG 465
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ G ++ ++ +V L R G+ +EA
Sbjct: 466 SQIHARVYVSGYSADVSIWNGLVYLYARCGISKEA 500
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 147/277 (53%), Gaps = 2/277 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++ ++HR + LS+ +++C T + G + GF + +VG++L
Sbjct: 125 EEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNAL 184
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I+LY +CR A +VF +M + V++ +I+ AQ D L ++ M+ S L P+
Sbjct: 185 ISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDS 244
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGF-FSYIQVANSLISMYCKCGNVEEAVYVFN 295
T S+L+AC+ G L +G+ H ++ G YI + SL+ +Y K G++EEA+ +F+
Sbjct: 245 VTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYI-MEGSLLDLYVKSGDIEEALQIFD 303
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ ++V WN M+ Y Q ++ D+F M+ V+P+ T+ ++ +C H G +
Sbjct: 304 SGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGL 363
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G+ K+G + ++ ++D+ + G L++A+
Sbjct: 364 GEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQ 400
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 1/177 (0%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG-ALGQ 254
M R S+ +A F + L L+ + F L AC GSG
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
H + I G Y + N LI +Y K G V A VF + +D VSW ++++GYAQ
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+GL A+ L+ EM + V P ++S+C L + G++ + K G E
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSE 177
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 259/466 (55%), Gaps = 33/466 (7%)
Query: 63 TKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVV-------- 114
T H ++I+ L+TD+ L S + ++ + VFD++ + +V
Sbjct: 16 TGKACHGQVIRLGLETDT--LTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGT 73
Query: 115 -----DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN 169
+ EK I + ++ RE +S+ V +C + ++ AI+ A+
Sbjct: 74 CVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDAD 133
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
V+VG++LI +Y+KC I DA VFE MP RN V+W++I+A F Q + L L+ +
Sbjct: 134 VFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKE 193
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
LE N F +S++ AC G AL +GR H R GF VA++L+ MY KCG++EE
Sbjct: 194 MGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEE 253
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A +F N+ K++V WN++I+G+A+H + ++LFEEM + ++PD +T++ V+S+C H
Sbjct: 254 AYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVH 313
Query: 350 GGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
GLV++G+ YFD M + H + P + HYSC+VD+LGR GL+ EA + + +MP A +W
Sbjct: 314 VGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMWG 373
Query: 409 -----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKG 451
AA++ +EP+ +V LAN YA + W++AA+ RK +K
Sbjct: 374 SLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAASKKWEEAAKARKSLKGSE 433
Query: 452 LKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
+ G SWIEI + V+ F A ++++ R+++I L+ L+++M L
Sbjct: 434 ILKERGKSWIEIKDKVHTFMAGERTHPRITDIYLELNNLLEEMTKL 479
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 1/272 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + + C R G IR G + + L+ +YSKC +I A KVF+E+P
Sbjct: 1 LHSLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIP 60
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R++VSW +I Q + + ++++ M+ ++FT +S++ AC G + R
Sbjct: 61 ERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQ 120
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ + + V +LI +Y KCG++E+A VF M ++ V+W+S++AG+ Q+ L
Sbjct: 121 LHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNEL 180
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ LF + ++ + VI +C + EG+ + + G P S
Sbjct: 181 YEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASA 240
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+VD+ + G +EEA + N V+W A
Sbjct: 241 LVDMYAKCGSIEEAYVLFCNIE-KKNVVLWNA 271
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 245/435 (56%), Gaps = 36/435 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHD--LHRERLKVDASFL-----------STAVTSCGS 147
+ +FDQ+ V+ +IS + +H++ L++ L S+ + +C
Sbjct: 67 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNG 126
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
++R C I+ G ++VYV S+LI +++K DA VF+EM + + W +I
Sbjct: 127 MSDVR---MLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 183
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I FAQ + D+ LEL++ M+ + T TS+L ACTG L G AH ++ +
Sbjct: 184 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--Y 241
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ + N+L+ MYCKCG++E+A VFN M +D+++W++MI+G AQ+G + A+ LFE
Sbjct: 242 DQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFEL 301
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
M KP+ IT +GV+ +C H GL+E+G YF SM K +G+ P +HY C++DLLG+AG
Sbjct: 302 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAG 361
Query: 387 LLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLAN 429
L++A + +M P+AV W AA+ + L+PE A T+ L+N
Sbjct: 362 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSN 421
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA + WD +RK M+D G+K PGCSWIE+ ++ F D+S+ ++ E+ L+
Sbjct: 422 IYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQ 481
Query: 490 LVDQMKTLGYVPEVH 504
L+ ++ +GYVPE +
Sbjct: 482 LIHRLIGIGYVPETN 496
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 168/343 (48%), Gaps = 27/343 (7%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L L D++ S + C S R + G G +++ + LI +Y K +
Sbjct: 4 LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA+++F++MP RNV+SWT +I+A+++ LEL +M + PN +T++S+L A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G + R HC I+ G S + V ++LI ++ K G E+A+ VF+ M D + W
Sbjct: 124 CNG---MSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
NS+I G+AQ+ + A++LF+ M + + T V+ +C L+E G + K
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 240
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHV 425
+ +L + +VD+ + G LE+AR QM + + W S L
Sbjct: 241 Y--DQDLILNNALVDMYCKCGSLEDARRVFNQMK-ERDVITWSTMISGL----------- 286
Query: 426 QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
N Y+ +A ++ +LMK G K N +I I+ V++
Sbjct: 287 -AQNGYS-----QEALKLFELMKSSGTKPN----YITIVGVLF 319
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 234/398 (58%), Gaps = 20/398 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + SC S N++ G C ++ G NV+V ++L+ +Y+KC + ++ K+F E+P
Sbjct: 246 FASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELP 305
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN V+W +I + Q D L LY+ M ++ ++ T++S+L AC A+ G
Sbjct: 306 NRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQ 365
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +++ + + V N+LI MY KCG+++ A VF+ + +D +SWN+MI+GY+ HGL
Sbjct: 366 IHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGL 425
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A+ F+ M + P+ +TF+ ++S+C + GL++ G+ YF SM + +G++P ++HY+
Sbjct: 426 VGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYT 485
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+V LLGR+G L++A I+++P+ PN +W A A+ L ++P+
Sbjct: 486 CMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQ 545
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
ATHV L+N+YA R W+ A VRK MK+KG+K PG SWIE +V+ F D S+
Sbjct: 546 DEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPD 605
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHE--EKVDDASHKR 515
+ I +L++L + + GYVP+++ V+D KR
Sbjct: 606 MKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKR 643
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 135/240 (56%), Gaps = 1/240 (0%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G + + C+ ++T + ++YVG L+ LY+K D +VFEEMP +V+ W+ +I+ +A
Sbjct: 161 GKSVHGCV-LKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYA 219
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
Q Q +EL+ MR + + PN FTF S+L +C L G+ HC +++G +
Sbjct: 220 QSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVF 279
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V+N+L+ +Y KCG ++ ++ +F + ++ V+WN+MI GY Q G +A+ L++ M++ +
Sbjct: 280 VSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQ 339
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
V+ +T+ V+ +C +E G K ++ + ++D+ + G ++ AR
Sbjct: 340 VQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNAR 399
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 143/292 (48%), Gaps = 1/292 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+++++ + +HRE +++ +T + S + G +N +VG++
Sbjct: 22 LDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTA 81
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI Y+ C + A + F+ + +++VSWT ++A +A+ + L+L+ MR PN
Sbjct: 82 LIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPN 141
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
FTF +L AC G A G+S H ++ + + V L+ +Y K G+ + + VF
Sbjct: 142 HFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFE 201
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M D++ W+ MI+ YAQ + A++LF +M + V P+ TF V+ SC ++
Sbjct: 202 EMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQL 261
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
GK + K GL + + ++D+ + G L+ + ++P N V W
Sbjct: 262 GKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELP-NRNEVTW 312
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 1/218 (0%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP RN VS+ +I + Q +Q+D ++L+ + E N F FT+IL
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
S H ++G S V +LI Y CG+V A F+ + KD+VSW M+A YA++
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
++ LF EM P+ TF GV+ +C GK + K + +L
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESR 413
++DL + G + ++MP + + + W SR
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKH-DVIPWSFMISR 217
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 253/467 (54%), Gaps = 32/467 (6%)
Query: 67 VHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHH-- 124
+H L + L D+ L+S H + + + +VFD++ VV LI+ +
Sbjct: 82 IHAHLSRSCLAGDAFLLNS--LIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQN 139
Query: 125 -----------DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
D+ R R + + ++ + + G+ G LA++ + +VYVG
Sbjct: 140 YMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVG 199
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
S+L+ +Y++C + A VF+ + +N VSW A+IA FA++ + L + M+ +
Sbjct: 200 SALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFG 259
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
FT++S+ SA GAL QGR H I+ G V N+++ MY K G++ +A V
Sbjct: 260 ATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKV 319
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M +D+V+WN+M+ AQ+GL A+ FEE+ K ++ + ITFL V+++C HGGLV
Sbjct: 320 FDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLV 379
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
+EGK YFD M + ++PE+DHY VDLLGRAGLL+EA F+ +MP+ P A +W
Sbjct: 380 KEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 439
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AA+ L+P+ V L N+YA W+ AARVRK+MK G+K P
Sbjct: 440 CRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEP 499
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
CSW++I N V+ F A+D ++ + +I + + + ++K GYVP
Sbjct: 500 ACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNT 546
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 132/273 (48%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
LH L + + +C +N+ G R+ + ++ +SLI +Y KC
Sbjct: 51 LHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGA 110
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA VF++MP R+VVSWT +IA +AQ + + L M + PN FTFTS+L A
Sbjct: 111 VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKA 170
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
G G H ++ + + V ++L+ MY +C ++ A+ VF+ + K+ VSW
Sbjct: 171 TGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSW 230
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N++IAG+A+ + F EM + T+ + S+ G +E+G+ + K
Sbjct: 231 NALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIK 290
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G K + ++ + ++G + +AR +M
Sbjct: 291 SGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRM 323
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 232/425 (54%), Gaps = 32/425 (7%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L R D + +C G C ++ GF +VYV + LI LY C
Sbjct: 133 LERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 192
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A KVF+EMP R++VSW ++I A + + D L+L+R M+ S EP+ +T S+LSA
Sbjct: 193 LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSA 251
Query: 246 CTGSGALGQGRSAHCQTIR---MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
C G G+L G AH +R + + V NSLI MYCKCG++ A VF M +D+
Sbjct: 252 CAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDL 311
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQR--VKPDAITFLGVISSCRHGGLVEEGKVYF 360
SWN+MI G+A HG A A++ F+ M+ +R V+P+++TF+G++ +C H G V +G+ YF
Sbjct: 312 ASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYF 371
Query: 361 DSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------- 409
D M + + ++P L+HY C+VDL+ RAG + EA D + MP+ P+AVIW +
Sbjct: 372 DMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA 431
Query: 410 ---------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
E C+ +V L+ +YA W+ VRKLM + G++
Sbjct: 432 SVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK 491
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHK 514
PGCS IEI + + F A D S+ + +I L + D+++++GY+P+ + + DA++
Sbjct: 492 EPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATND 551
Query: 515 RTEPF 519
++ +
Sbjct: 552 GSKEY 556
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW-QVDMCLELYR- 225
A +++ ++ L S + A++VF+ + + W +I A A + + + LYR
Sbjct: 72 ATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRK 131
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ P+ TF +L AC +G+ HCQ ++ GF + V N LI +Y CG
Sbjct: 132 MLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 191
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++ A VF+ M + +VSWNSMI + G A+ LF EM + +PD T V+S
Sbjct: 192 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLS 250
Query: 346 SCRHGGLVEEG 356
+C G + G
Sbjct: 251 ACAGLGSLSLG 261
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 224/378 (59%), Gaps = 19/378 (5%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C R+++ G ++TG + +V+V S+LI Y KC +++A K F+ + RNVV+W
Sbjct: 239 CAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAW 298
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
TA++ A+ Q + L L+ M PN+FTF +L+AC AL G H + +
Sbjct: 299 TAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVM 358
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
GF +++ V N+LI+MY K GN++ + VF+NM +D+++WN+MI GY+ HGL +A+ +
Sbjct: 359 SGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLV 418
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS-MAKHGLKPELDHYSCVVDLLG 383
F++MM P+ +TF+GV+S+C H LV+EG YFD M K ++P L+HY+C+V LLG
Sbjct: 419 FQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLG 478
Query: 384 RAGLLEEARDFIKQMP-IYPNAVIW-----------------EAAESRLLLEPECAATHV 425
RAGLL+EA +F+K + + V W + E+ + ++P T+
Sbjct: 479 RAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYT 538
Query: 426 QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILP 485
L+N++A R WD ++RKLMK++ +K PG SW++I N + F +E ++ ++I
Sbjct: 539 LLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFE 598
Query: 486 VLDFLVDQMKTLGYVPEV 503
+ L+ +K LGY P+V
Sbjct: 599 KVQQLLAMIKPLGYAPDV 616
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 127/243 (52%), Gaps = 2/243 (0%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSML 232
+SLI LYSKC A K+F+ M RNVVSW+A++ + + +V L L+R ++
Sbjct: 65 NSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSA 124
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN++ FT +LS C SG + +G+ H ++ G + V N+LI MY +C +V+ A+
Sbjct: 125 YPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQ 184
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+ + + G D+ S+NS+++ + G A + + M+ + V D++T++ V+ C
Sbjct: 185 ILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRD 244
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
++ G + K GL ++ S ++D G+ G + AR + N V W A +
Sbjct: 245 LQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRD-RNVVAWTAVLT 303
Query: 413 RLL 415
L
Sbjct: 304 AYL 306
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 153/320 (47%), Gaps = 15/320 (4%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHD-------LHRERLKVDASF-----LSTAVTSCGSTR 149
+FD++L VV L+ +H L R + +D+++ + ++ C +
Sbjct: 83 LFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSG 142
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
++ G +++G + + YV ++LI +YS+C + A ++ + +P +V S+ +I++
Sbjct: 143 RVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILS 202
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
A + ++ + M + + + T+ S+L C L G H Q ++ G
Sbjct: 203 ALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVF 262
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ V+++LI Y KCG V A F+ + +++V+W +++ Y Q+G ++LF +M
Sbjct: 263 DVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKME 322
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
+ +P+ TF ++++C + G + + G K L + ++++ ++G ++
Sbjct: 323 LEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNID 382
Query: 390 EARDFIKQMPIYPNAVIWEA 409
+ + M + + + W A
Sbjct: 383 SSYNVFSNM-MNRDVITWNA 401
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 255 GRSAHCQTI---RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
G++ H Q + + S I NSLI++Y KCG + A +F+ M +++VSW++++ G
Sbjct: 42 GKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMG 101
Query: 312 YAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
Y G + + LF ++ P+ F V+S C G V+EGK + K GL
Sbjct: 102 YLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGL 159
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 242/433 (55%), Gaps = 50/433 (11%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + + + E + +D L+T ++ C + ++ G L +++G + V +SLI
Sbjct: 344 KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLI 403
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NS 230
+LY+KC + +A VF M R++VSWT++I A++Q + E + M N+
Sbjct: 404 SLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNA 463
Query: 231 ML-------------------------EPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
ML P+ T+ ++ C GA G T++
Sbjct: 464 MLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKA 523
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + VAN+ I+MY KCG + EA +F+ ++GKD+VSWN+MI GY+QHG+ +A F
Sbjct: 524 GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTF 583
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
++M+ + KPD I+++ V+S C H GLV+EGK+YFD M + HG+ P L+H+SC+VDLLGR
Sbjct: 584 DDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGR 643
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEAAESRLLLE-----PECAATHV------------QL 427
AG L EA+D I +MP+ P A +W A S + E AA HV L
Sbjct: 644 AGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLL 703
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
A +Y+ D +A+VRKLM+DKG+K NPG SW+E+ N V+ F+A+D S+ ++ I +
Sbjct: 704 AKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKM 763
Query: 488 DFLVDQMKTLGYV 500
D L++++ LGYV
Sbjct: 764 DELMEKIAHLGYV 776
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 143/261 (54%), Gaps = 5/261 (1%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + + ++HR+ +++D++ ++++T+C ++ G IR+ + YV S+
Sbjct: 241 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 300
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI LY+KC +A +VF + RN VSWT +I Q +EL+ MR ++ +
Sbjct: 301 LIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAID 360
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
F +++S C L GR H ++ G I V+NSLIS+Y KCG+++ A +VF+
Sbjct: 361 QFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFS 420
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+M +DIVSW SMI Y+Q G ++A + F+ M + +AIT+ ++ + G E+
Sbjct: 421 SMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEED 476
Query: 356 G-KVYFDSMAKHGLKPELDHY 375
G K+Y +++ + P+ Y
Sbjct: 477 GLKMYSAMLSQKDVTPDWVTY 497
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 97/179 (54%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
++ +S++ Y+K I A + FE+M R+VVSW +IAA +Q +V L L M
Sbjct: 193 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 252
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ + T+TS L+AC +LG G+ H + IR VA++LI +Y KCG+ +
Sbjct: 253 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFK 312
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
EA VFN++ ++ VSW +I G Q+ ++++LF +M + + D +IS C
Sbjct: 313 EAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 158/370 (42%), Gaps = 48/370 (12%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE-EM 196
L+ A+ SCGS + G + G + V++ ++L+ Y C + DA ++ ++
Sbjct: 23 LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 82
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGS----GA 251
NV++ ++ +A++ + EL+ RM R + N T S S GS GA
Sbjct: 83 KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWN--TLMSDTSRPAGSWMSCGA 140
Query: 252 LGQGRSAHCQTI----RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
LG R Q + + F+ V +L+ M+ +CG V+ A +F+ + I NS
Sbjct: 141 LGC-RELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNS 199
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M+AGYA+ AI+ FE+M ++ D +++ +I++ G V E M + G
Sbjct: 200 MLAGYAKLYGIDHAIEYFEDMAER----DVVSWNMMIAALSQSGRVREALGLVVEMHRKG 255
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDF----IKQMPIYPNAVIWEAAESRLLLEPECAAT 423
++ + Y+ + R L + I+ +P ++P A+
Sbjct: 256 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP---------------QIDPYVASA 300
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKS----NTR 479
L LYA + +A RV ++D+ SW ++ ++ KS N
Sbjct: 301 ---LIELYAKCGSFKEAKRVFNSLQDRN-----SVSWTVLIGGSLQYECFSKSVELFNQM 352
Query: 480 LSEILPVLDF 489
+E++ + F
Sbjct: 353 RAELMAIDQF 362
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 242/464 (52%), Gaps = 69/464 (14%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMH--HDLHRERLKV-----------DASFLSTAVTSCGS 147
+ VFD++ D VV LI+ + + E LKV D L++ +++C S
Sbjct: 206 AQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACAS 265
Query: 148 TRNIRGGAPYQCLAIRTGFIAN-VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV----- 201
I+ G ++ + N + + ++ + +Y+KC I +A +F+ MP+RNV
Sbjct: 266 LSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 202 --------------------------VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
VSW A+IA + Q + + L L+ +++ + P
Sbjct: 326 MVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGF-FSY-----IQVANSLISMYCKCGNVEE 289
+TF +IL AC L G AH ++ GF F I V NSLI MY KCG VEE
Sbjct: 386 HYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
VF M +D VSWN+MI G+AQ+G A++LF EM+ KPD IT +GV+S+C H
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGH 505
Query: 350 GGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
G VEEG+ YF SM + G+ P DHY+C+VDLLGRAG LEEA+ I++MP+ P++VIW
Sbjct: 506 AGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWG 565
Query: 409 A-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKG 451
+ AE +E + +V L+N+YA + W A VRKLM+ +G
Sbjct: 566 SLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEG 625
Query: 452 LKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
+ PGCSWI+I + F +DKS+ R +I +LD L+ +M+
Sbjct: 626 VTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 163/322 (50%), Gaps = 39/322 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H+E ++ ++ +++C ++ G L ++ +++VY+GS+L+ +YSKC
Sbjct: 143 MHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGN 202
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA +VF+EM RNVVSW ++I + Q L+++++M S +EP++ T S++SA
Sbjct: 203 VNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISA 262
Query: 246 CTGSGALGQGRSAHCQTIRMG-FFSYIQVANSLISMYCKCGNVEEAVYVFNN-------- 296
C A+ G+ H + ++M + I ++N+ + MY KC ++EA ++F++
Sbjct: 263 CASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 297 -----------------------MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
M +++VSWN++IAGY Q+G A+ LF + ++ V
Sbjct: 323 ETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 382
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK----PELDHY--SCVVDLLGRAGL 387
P TF ++ +C + G + KHG K E D + + ++D+ + G
Sbjct: 383 CPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 442
Query: 388 LEEARDFIKQMPIYPNAVIWEA 409
+EE ++M + + V W A
Sbjct: 443 VEEGYLVFRKM-MERDCVSWNA 463
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 138/271 (50%), Gaps = 32/271 (11%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII------------- 208
I++GF V++ + LI Y+KC + D ++F++MP RNV +W +++
Sbjct: 47 IKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEAD 106
Query: 209 ------------------AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+ FAQ + + L + MM N++TF S LSAC+G
Sbjct: 107 SLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLN 166
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ +G H + S + + ++L+ MY KCGNV +A VF+ M +++VSWNS+I
Sbjct: 167 DMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLIT 226
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK-VYFDSMAKHGLK 369
Y Q+G AV A+ +F+ M++ V+PD +T VIS+C ++ G+ V+ + L+
Sbjct: 227 CYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLR 286
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
++ + VD+ + ++EAR MPI
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H I+ GF + + + N LI Y KCG++E+ +F+ M +++ +WNS++ G +
Sbjct: 40 RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G A LF M ++ D T+ ++S EE YF M K G L+ Y
Sbjct: 100 GFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFV--LNEY 153
Query: 376 SCVVDLLGRAGL 387
+ L +GL
Sbjct: 154 TFASGLSACSGL 165
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/431 (35%), Positives = 243/431 (56%), Gaps = 50/431 (11%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + + E + +D L+T ++ C S ++ G L +++G I V V +SLI++
Sbjct: 376 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 435
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NSML 232
Y+KC + A +F M +++VSWT++I A++Q V E + M N+ML
Sbjct: 436 YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAML 495
Query: 233 -------------------------EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
P+ T+ ++ C GA G +T+++G
Sbjct: 496 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 555
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
VAN++I+MY KCG + EA VF+ ++ KDIVSWN+MI GY+QHG+ +AI++F++
Sbjct: 556 IIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 615
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
++K+ KPD I+++ V+S C H GLV+EGK YFD M + H + P L+H+SC+VDLLGRAG
Sbjct: 616 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAG 675
Query: 387 LLEEARDFIKQMPIYPNAVIWEAAESRLLLE-----PECAATHV------------QLAN 429
L EA+D I MP+ P A +W A S + E AA HV +A
Sbjct: 676 HLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 735
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA D +A++RKLM+DKG+K NPG SW+E+ N V+ F+A+D S+ ++ I LD
Sbjct: 736 IYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDE 795
Query: 490 LVDQMKTLGYV 500
L++++ LGYV
Sbjct: 796 LMEKIARLGYV 806
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 177/405 (43%), Gaps = 63/405 (15%)
Query: 65 TEVHLRLIQDFLQTDSKHLDSQKF-----------NHDFTGTNSTFGSSN---VFDQLLD 110
+EV L+ F++ + L S+ F N G T+G + +FD + +
Sbjct: 193 SEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPE 252
Query: 111 TPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPY 157
VV ++S M D+ + +++D++ ++++T+C ++R G
Sbjct: 253 RDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQL 312
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
IR + YV S+L+ LY+K +A VF + RN V+WT +I+ F Q
Sbjct: 313 HAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCF 372
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+EL+ MR ++ + F +++S C L GR H ++ G + V+NSL
Sbjct: 373 TESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSL 432
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR----- 332
ISMY KC N++ A +F M+ KDIVSW SMI Y+Q G +A + F+ M ++
Sbjct: 433 ISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWN 492
Query: 333 ---------------------------VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
V+PD +T++ + C G + G K
Sbjct: 493 AMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVK 552
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYP-NAVI 406
GL + + V+ + + G + EAR DF+ I NA+I
Sbjct: 553 VGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMI 597
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 56/304 (18%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMM 227
NV + ++ Y+K + DA ++F MP R+V SW +++ + Q Q + LE + M
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ---------VANSLI 278
R+ PN FT + +C GALG ++ + + +Q VA +L+
Sbjct: 150 RSGDSWPNAFTLACAMKSC---GALGW------HSLALQLLAMVQKFDSQDDSEVAAALV 200
Query: 279 SMYCKCG-------------------------------NVEEAVYVFNNMHGKDIVSWNS 307
M+ +CG V+ A+ +F++M +D+VSWN
Sbjct: 201 DMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNM 260
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M++ +Q G A+D+ +M + V+ D+ T+ +++C + GK + ++
Sbjct: 261 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN- 319
Query: 368 LKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHV 425
P +D Y S +V+L ++G +EA+ + N V W S L+ C V
Sbjct: 320 -LPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNN-VAWTVLISG-FLQYGCFTESV 376
Query: 426 QLAN 429
+L N
Sbjct: 377 ELFN 380
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/431 (35%), Positives = 243/431 (56%), Gaps = 50/431 (11%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + + E + +D L+T ++ C S ++ G L +++G I V V +SLI++
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 415
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NSML 232
Y+KC + A +F M +++VSWT++I A++Q V E + M N+ML
Sbjct: 416 YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAML 475
Query: 233 -------------------------EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
P+ T+ ++ C GA G +T+++G
Sbjct: 476 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 535
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
VAN++I+MY KCG + EA VF+ ++ KDIVSWN+MI GY+QHG+ +AI++F++
Sbjct: 536 IIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 595
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
++K+ KPD I+++ V+S C H GLV+EGK YFD M + H + P L+H+SC+VDLLGRAG
Sbjct: 596 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAG 655
Query: 387 LLEEARDFIKQMPIYPNAVIWEAAESRLLLE-----PECAATHV------------QLAN 429
L EA+D I MP+ P A +W A S + E AA HV +A
Sbjct: 656 HLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 715
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA D +A++RKLM+DKG+K NPG SW+E+ N V+ F+A+D S+ ++ I LD
Sbjct: 716 IYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDE 775
Query: 490 LVDQMKTLGYV 500
L++++ LGYV
Sbjct: 776 LMEKIARLGYV 786
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 175/404 (43%), Gaps = 60/404 (14%)
Query: 65 TEVHLRLIQDFLQTDSKHLDSQKF-----------NHDFTGTNSTFGSSN---VFDQLLD 110
+EV L+ F++ + L S+ F N G T+G + +FD + +
Sbjct: 173 SEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPE 232
Query: 111 TPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPY 157
VV ++S M D+ + +++D++ ++++T+C ++R G
Sbjct: 233 RDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQL 292
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
IR + YV S+L+ LY+K +A VF + RN V+WT +I+ F Q
Sbjct: 293 HAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCF 352
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+EL+ MR ++ + F +++S C L GR H ++ G + V+NSL
Sbjct: 353 TESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSL 412
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR----- 332
ISMY KC N++ A +F M+ KDIVSW SMI Y+Q G +A + F+ M ++
Sbjct: 413 ISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWN 472
Query: 333 ---------------------------VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
V+PD +T++ + C G + G K
Sbjct: 473 AMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVK 532
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GL + + V+ + + G + EAR + + + V W A
Sbjct: 533 VGLIIDTSVANAVITMYSKCGRILEARKVFDFLNV-KDIVSWNA 575
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 56/304 (18%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMM 227
NV + ++ Y+K + DA ++F MP R+V SW +++ + Q Q + LE + M
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ---------VANSLI 278
R+ PN FT + +C GALG ++ + + +Q VA +L+
Sbjct: 130 RSGDSWPNAFTLACAMKSC---GALGW------HSLALQLLAMVQKFDSQDDSEVAAALV 180
Query: 279 SMYCKCG-------------------------------NVEEAVYVFNNMHGKDIVSWNS 307
M+ +CG V+ A+ +F++M +D+VSWN
Sbjct: 181 DMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNM 240
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M++ +Q G A+D+ +M + V+ D+ T+ +++C + GK + ++
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN- 299
Query: 368 LKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHV 425
P +D Y S +V+L ++G +EA+ + N V W S L+ C V
Sbjct: 300 -LPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNN-VAWTVLISG-FLQYGCFTESV 356
Query: 426 QLAN 429
+L N
Sbjct: 357 ELFN 360
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F ++L A GAL R I + N +++ Y K G + +AV +F
Sbjct: 40 FLQNTLLHAYLSCGALSDARRLLLMDIA---HPNVITHNVMLNGYAKLGRLSDAVELFGR 96
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK-PDAITFLGVISSCRHGGLVEE 355
M +D+ SWN++++GY Q + +++ F M + P+A T + SC G
Sbjct: 97 MPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSL 156
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA-RDFIK 396
+ K + + + + +VD+ R G ++ A R F++
Sbjct: 157 ALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVR 198
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 233/430 (54%), Gaps = 31/430 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD++L+ V ++S + ++H D L + + C R
Sbjct: 45 VFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRA 104
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
G ++ G+ N+ VGSSL +Y K + + KV + M +RNVV+W +IA
Sbjct: 105 SYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAG 164
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
AQ + L+LY MM+ S L P+ T S++S+ L QG+ H + I+ G S
Sbjct: 165 NAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSA 224
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ V +SLISMY KCG +E+++ + D V W+SMIA Y HG A+ LFE+M +
Sbjct: 225 VAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQ 284
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLE 389
+ + + +TFL ++ +C H GL E+G +F M K+GLKP L+HY+CVVDLLGR+G L+
Sbjct: 285 EGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLD 344
Query: 390 EARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYA 432
EA I+ MP+ + VIW+ AE L L P+ +AT+V L+N++A
Sbjct: 345 EAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHA 404
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
+ W ++VR M+D+ +K PG SW+E+ N V++F DKS+ EI L L++
Sbjct: 405 SAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELME 464
Query: 493 QMKTLGYVPE 502
+MK GYVP+
Sbjct: 465 EMKLRGYVPD 474
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A KVF+EM RNV +W A+++ Q + L L+R M P++FT S+L C G
Sbjct: 42 AIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAG 101
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A G+ H ++ G+ + V +SL MY K G++ E V M +++V+WN++
Sbjct: 102 LRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTL 161
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
IAG AQ+G +DL+ M ++PD IT + VISS + +G+ K G
Sbjct: 162 IAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGA 221
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S ++ + + G LE++ + +P++V+W +
Sbjct: 222 NSAVAVLSSLISMYSKCGCLEDSMKALLDCE-HPDSVLWSS 261
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
I N LI+ + + G+++ A+ VF+ M +++ +WN+M++G Q + LF EM +
Sbjct: 23 IMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHE 82
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
PD T V+ C GK + K+G + L S + + ++G L E
Sbjct: 83 LGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGE 142
Query: 391 ARDFIKQMPIYPNAVIW 407
IK M I N V W
Sbjct: 143 GEKVIKAMRI-RNVVAW 158
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY K G ++EA+ FN M ++I+S N +I G+ QHG AI +F+EM+++ V T
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVA----T 56
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
+ ++S E G F M + G P D ++ L G AGL
Sbjct: 57 WNAMVSGLIQFEFNENGLFLFREMHELGFLP--DEFTLGSVLRGCAGL 102
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 242/469 (51%), Gaps = 66/469 (14%)
Query: 100 GSSNVFDQLLDTPVVDVEKLIS--MHHDLHRERL-----------KVDASFLSTAVTSCG 146
G+ + D + + P + +IS +HH L + L +VD S ++ +++C
Sbjct: 241 GAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACA 300
Query: 147 STRNIRGGAPYQCLAIRTGFIAN----VYVGSSLITLYSKCRVIIDAYKVFEEMPVR--- 199
G ++ + + VG++LITLY K + A K+F EMPV+
Sbjct: 301 DGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDII 360
Query: 200 ----------------------------NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
N+++WT +I+ AQ + L+L+ M+
Sbjct: 361 TWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDG 420
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
EPND+ F ++AC+ GAL GR H Q + +G S + V N++I+MY +CG VE A
Sbjct: 421 YEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAAR 480
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F M D VSWNSMIA QHG V+AI+L+E+M+K+ + PD TFL V+S+C H G
Sbjct: 481 TMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAG 540
Query: 352 LVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--- 407
LVEEG YF+SM + +G+ P DHY+ ++DL RAG +A++ I MP A IW
Sbjct: 541 LVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEAL 600
Query: 408 --------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
EAAE L P+ T+V L+N+YA + W+ AR RKLM+D+G+K
Sbjct: 601 LAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVK 660
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
P CSW E+ N V+ F +D + + I L+ L +MK +GY+P+
Sbjct: 661 KEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPD 709
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 36/276 (13%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N ++ ++LIT Y + + A ++ + M + ++W A+I+ + + L L+R MR
Sbjct: 222 NEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMR 281
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS----YIQVANSLISMYCKC 284
++ ++ T+TS++SAC G G+ H ++ + V N+LI++Y K
Sbjct: 282 LLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKY 341
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGY-------------------------------A 313
G V+ A +F M KDI++WN++++GY A
Sbjct: 342 GKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLA 401
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q+G +A+ LF +M +P+ F G I++C G +E G+ + G L
Sbjct: 402 QNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLS 461
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++ + R G++E AR MP + + V W +
Sbjct: 462 VGNAMITMYARCGIVEAARTMFLTMP-FVDPVSWNS 496
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 135/313 (43%), Gaps = 65/313 (20%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+V ++LIT YS + A ++F E P+ R+ V + A+I ++ +EL+R
Sbjct: 78 DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137
Query: 227 MRNSMLEPNDFTFTSILSACT----GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
MR + +P+DFTF S+LSA T GQ H ++ G + V N+L+S+Y
Sbjct: 138 MRWANFQPDDFTFASVLSASTLIFYDERQCGQ---MHGTVVKFGIEIFPAVLNALLSVYV 194
Query: 283 KC----------------------------------------GNVEEAVYVFNNMHGKDI 302
KC G++ A + + M +
Sbjct: 195 KCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPG 254
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
++WN+MI+GY HGL A+ LF +M V+ D T+ VIS+C GG GK
Sbjct: 255 IAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAY 314
Query: 363 MAKHGLKPELDHY----SCVVDLLGRAGLLEEARDFIKQMPI------------YPNAVI 406
+ K+ L P+ D + ++ L + G ++ AR +MP+ Y NA
Sbjct: 315 ILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGR 374
Query: 407 WEAAESRLLLEPE 419
E A+S PE
Sbjct: 375 MEEAKSFFAQMPE 387
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/413 (36%), Positives = 233/413 (56%), Gaps = 18/413 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D +++ M + + D L + VT+CG + + G G N + +
Sbjct: 201 DWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVT 260
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC I A ++F+ M R+VV+W+A+I+ + Q Q L L+ M+ + +EP
Sbjct: 261 ALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEP 320
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
ND T S+LSAC GAL G+ H R + +L+ Y KCG +++AV F
Sbjct: 321 NDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAF 380
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+M K+ +W ++I G A +G A++LF M + ++P +TF+GV+ +C H LVE
Sbjct: 381 ESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVE 440
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
EG+ +FDSMA+ +G+KP ++HY C+VDLLGRAGL++EA FI+ MPI PNAVIW
Sbjct: 441 EGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSS 500
Query: 408 -----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
EA + + L P + +V L+N+YA W AA VRK MKD+G++ P
Sbjct: 501 CAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTP 560
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
GCS IE+ VV+ F AED + L EI ++ ++ ++K GYVP + +++
Sbjct: 561 GCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLE 613
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 141/278 (50%), Gaps = 5/278 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + A+ SC + G Q A++ G +A+ +V SSLI +Y+ C + A VF
Sbjct: 119 DQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVF 178
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC--TGSGA 251
+ VV W AI+AA+ + +E+++ M + ++ T S+++AC G
Sbjct: 179 DAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAK 238
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
LG+ + H G ++ +L+ MY KCG + +A +F+ M +D+V+W++MI+G
Sbjct: 239 LGKWVAGHVD--EEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISG 296
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Y Q A+ LF EM RV+P+ +T + V+S+C G +E GK + + L
Sbjct: 297 YTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLT 356
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD + G +++A + + MP+ N+ W A
Sbjct: 357 TILGTALVDFYAKCGCIDDAVEAFESMPV-KNSWTWTA 393
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 225/390 (57%), Gaps = 17/390 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ D L +A SCG G CL+++TG+ A+V+VGSSL+ +Y+KC I+ A
Sbjct: 112 LRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F+EMP+RNVV+W+ ++ +AQ + + L L++ L ND++F++++S C S
Sbjct: 172 KMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANST 231
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L GR I+ F S V +SL+S+Y KCG++E A VF+ + +++ WN+M+
Sbjct: 232 LLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLK 291
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
AQH + I+LF+ M +KP+ ITFL V+++C H GLV+EGK YFD M + ++P
Sbjct: 292 ACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEP 351
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
HY+ +VD+LGRAG LEEA + + MPI P +W AA+
Sbjct: 352 TDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTELAAFAADKV 411
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
L P + H+ L+N YA ++ AA+ RKL++D+G K G SW+E N V+ F A
Sbjct: 412 FELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAG 471
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
++ + R EI L L ++M+ GYV +
Sbjct: 472 ERRHERSKEIYEKLAELGEEMEKAGYVADT 501
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 158/332 (47%), Gaps = 38/332 (11%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
S +R+I G +++G V ++LI YSK ++ D+ + FE+ P ++ +
Sbjct: 24 SSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATT 83
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W++II+ FAQ M LE R M L P+D S +C G+S HC ++
Sbjct: 84 WSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSM 143
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ G+ + + V +SL+ MY KCG + A +F+ M +++V+W+ M+ GYAQ G A+
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALW 203
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG--------KVYFDSMAKHGLKPELDHY 375
LF+E + + + + +F VIS C + L+E G K FDS + G
Sbjct: 204 LFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVG-------- 255
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVR 435
S +V L + G LE A ++P+ N IW A +L+ +H Q
Sbjct: 256 SSLVSLYSKCGDLEGAYQVFDEVPMR-NLGIWNA-----MLKACAQHSHTQ--------- 300
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
+ + K MK G+K N +I +NV+
Sbjct: 301 ---KVIELFKRMKLSGMKPN----FITFLNVL 325
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 101/178 (56%), Gaps = 18/178 (10%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E L V+ ST ++ C ++ + G Q L I++ F ++ +VGSSL++LYSKC +
Sbjct: 211 ENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEG 270
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
AY+VF+E+P+RN+ W A++ A AQ +EL++ M+ S ++PN TF ++L+AC+
Sbjct: 271 AYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVAN---------SLISMYCKCGNVEEAVYVFNNM 297
+G + +G+ +F ++ + SL+ M + G +EEA+ + NM
Sbjct: 331 AGLVDEGKY---------YFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNM 379
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+L + S ++ +G H ++ G VAN+LI+ Y K ++ F + K
Sbjct: 21 LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+W+S+I+ +AQ+ L +++ +MM ++PD SC + GK
Sbjct: 81 ATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHC 140
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K G ++ S +VD+ + G + AR +MP+ N V W
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLR-NVVTWSG 187
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 229/401 (57%), Gaps = 19/401 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S+ + RE DA+ +++ + AI G + ++ VG++L+ +
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHM 479
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + A +VF++M RNV +WT +I+ AQ L+ M + P+ T+
Sbjct: 480 YAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
SILSAC +GAL + H + G S ++V N+L+ MY KCG+V++A VF++M
Sbjct: 540 VSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLE 599
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+ SW MI G AQHG + A+DLF +M + KP+ +F+ V+S+C H GLV+EG+
Sbjct: 600 RDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQ 659
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
F S+ + +G++P ++HY+C+VDLLGRAG LEEA+ FI MPI P W
Sbjct: 660 FLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYG 719
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AA+ RL L+P+ A+T+V L+N+YA W+Q VR +M+ +G++ PG SWI
Sbjct: 720 NLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWI 779
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
E+ N ++ F D S+ EI L L+ ++K GYVP+
Sbjct: 780 EVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPD 820
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 170/358 (47%), Gaps = 19/358 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + ++ + RE + + + + +C S +++ G I++GF ++V V ++L
Sbjct: 12 EDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETAL 71
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC I DA +F++M RNV+SWT +I A + + M+ PN
Sbjct: 72 VNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNS 131
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+T+ SIL+A +GAL + H + G ++V N+L+ MY K G++++A VF+
Sbjct: 132 YTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDG 191
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI--SSCRHGGLVE 354
M +DI SW MI G AQHG A LF +M + P+ T+L ++ S+ G +E
Sbjct: 192 MVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALE 251
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM----PIYPNAVIWEAA 410
K K G +L + ++ + + G +++AR M I NA+I A
Sbjct: 252 WVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLA 311
Query: 411 ESR---------LLLEPEC----AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
++ L ++ E + T++ L N + W+ V K + GL ++
Sbjct: 312 QNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSD 369
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 133/251 (52%), Gaps = 3/251 (1%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
A+ G ++ VG++L+ +Y+K I DA VF+ M R++ SWT +I AQ +
Sbjct: 157 AVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEA 216
Query: 221 LELYRMMRNSMLEPNDFTFTSIL--SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L+ M PN T+ SIL SA T +GAL + H + GF S ++V N+LI
Sbjct: 217 FSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALI 276
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY KCG++++A VF+ M +D++SWN+MI G AQ+G A +F +M ++ PD+
Sbjct: 277 HMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDST 336
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
T+L ++++ G E K + GL +L S V + R G +++A+ ++
Sbjct: 337 TYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKL 396
Query: 399 PIYPNAVIWEA 409
+ N W A
Sbjct: 397 AV-RNVTTWNA 406
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 118/208 (56%), Gaps = 3/208 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++A+TS G+ ++ A + GFI+++ VG++LI +Y+KC I DA VF+ M
Sbjct: 241 ASAITSTGALEWVK---EVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCD 297
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+V+SW A+I AQ ++ M+ P+ T+ S+L+ +GA +
Sbjct: 298 RDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEV 357
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + +G S ++V ++ + MY +CG++++A +F+ + +++ +WN+MI G AQ
Sbjct: 358 HKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCG 417
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISS 346
A+ LF +M ++ PDA TF+ ++S+
Sbjct: 418 REALSLFLQMRREGFFPDATTFVNILSA 445
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 102/186 (54%)
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I +A+ + +++Y MR +PN+ T+ SIL AC +L G+ H I+ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
F S ++V +L++MY KCG++++A +F+ M ++++SW MI G A +G A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+M ++ P++ T++ ++++ G +E K GL +L + +V + ++G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 387 LLEEAR 392
+++AR
Sbjct: 181 SIDDAR 186
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI GYA++G A A+ ++ +M ++ +P+ IT+L ++ +C ++ GK + + G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ ++ + +V++ + G +++A+ +M + N + W
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKM-VERNVISW 99
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 240/409 (58%), Gaps = 28/409 (6%)
Query: 117 EKLISMHHDLHRERLKVD----ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
E+ + + ++H +K+D S L+ V + +++ G L I+TGF V
Sbjct: 348 EEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHG------LIIKTGFENYKLV 401
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
++L+ +Y+K + AY VFE+M ++V+SWT+++ +AQ + L+++ MR + +
Sbjct: 402 SNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGV 461
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
P+ F SILSAC L G+ H I+ G V NSL++MY KCG +++A
Sbjct: 462 NPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADA 521
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F +M KD+++W ++I GYAQ+G ++ ++ M+ +PD ITF+G++ +C H GL
Sbjct: 522 IFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGL 581
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE--- 408
V+EG+ YF M K +G+KP +HY+C++DL GR+G L+EA+ + QM + P+A +W+
Sbjct: 582 VDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLL 641
Query: 409 --------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
AA + LEP A +V L+N+Y+ R W+ A++RKLMK KG+
Sbjct: 642 SACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVK 701
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
PGCSW+EI + V F ++D+ + R +EI +D ++ ++K GYVP++
Sbjct: 702 EPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDM 750
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 152/295 (51%), Gaps = 3/295 (1%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D K + +H + ++ + T +T+C S G +++GF +NVYV S
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQS 304
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC + +A + E M +VVSW +++ F + + L L++ M ++
Sbjct: 305 ALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKI 364
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+D+TF S+L+ C G++ +S H I+ GF +Y V+N+L+ MY K G+++ A VF
Sbjct: 365 DDYTFPSVLNCCV-VGSINP-KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVF 422
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M KD++SW S++ GYAQ+ ++ +F +M V PD ++S+C L+E
Sbjct: 423 EKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLE 482
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GK K GL+ Y+ +V + + G L++A M + + + W A
Sbjct: 483 FGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV-KDVITWTA 536
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 145/286 (50%), Gaps = 20/286 (6%)
Query: 125 DLHR----ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
DL R E K L + + C S I+ G ++ GF NV+V + L+ +Y
Sbjct: 148 DLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMY 207
Query: 181 SKCRVIIDAYKVFE--EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+KC+ + +A +F+ E +N V WTA++ +AQ +E +R M +E N +T
Sbjct: 208 AKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYT 267
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F +IL+AC+ A G H ++ GF S + V ++L+ MY KCG+++ A + M
Sbjct: 268 FPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETME 327
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
D+VSWNS++ G+ +HGL A+ LF+ M + +K D TF V++ C G +
Sbjct: 328 DDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI------ 381
Query: 359 YFDSMAKHGL--KPELDHYSCV----VDLLGRAGLLEEARDFIKQM 398
+ + HGL K ++Y V VD+ + G ++ A ++M
Sbjct: 382 --NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM 425
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 33/263 (12%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV-------DMC- 220
++Y + L+ SK + DA K+F++MP ++ SW +I+++ ++ D C
Sbjct: 64 SIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCS 123
Query: 221 -----------------------LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+L+R MR + + FT S+L C+ G + G
Sbjct: 124 CKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEM 183
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH--GKDIVSWNSMIAGYAQH 315
H ++ GF + V L+ MY KC V EA ++F + K+ V W +M+ GYAQ+
Sbjct: 184 IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQN 243
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G +A++ F M Q V+ + TF ++++C G+ + K G +
Sbjct: 244 GDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQ 303
Query: 376 SCVVDLLGRAGLLEEARDFIKQM 398
S +VD+ + G L+ A++ ++ M
Sbjct: 304 SALVDMYAKCGDLKNAKNMLETM 326
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 73/186 (39%), Gaps = 34/186 (18%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA----- 310
RS H T + I N L++ K G V +A +F+ M KD SWN+MI+
Sbjct: 52 RSIH--TTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNV 109
Query: 311 --------------------------GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
GY + G V A DLF M + K T V+
Sbjct: 110 GRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVL 169
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI-YPN 403
C GL++ G++ + K+G + + + +VD+ + + EA K + N
Sbjct: 170 RVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKN 229
Query: 404 AVIWEA 409
V+W A
Sbjct: 230 HVLWTA 235
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 222/375 (59%), Gaps = 18/375 (4%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C ST+ + G A++ NVYVGS+L+ +Y KC DA+ FE +P +NVVSW
Sbjct: 219 CASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSW 278
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
TA++ A+ Q + + L+L+ + + PN+FT+ L++C G AL G + ++
Sbjct: 279 TAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMK 338
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G + + V N+L++MY K G++ +A VF +M +D+VSWNS+I GYA HGLA A+ +
Sbjct: 339 TGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCV 398
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLG 383
F +M+ + P +TF+GV+ +C GLV+EG Y + M K G+KP +HY+C+V LL
Sbjct: 399 FHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLC 458
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQ 426
RAG L+EA FI I + V W++ AE L L+P T+V
Sbjct: 459 RAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTYVL 518
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
L+N+YA WD +VRKLM+++G++ PG SWI++ + V+ F +EDK++ +++I
Sbjct: 519 LSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQITIK 578
Query: 487 LDFLVDQMKTLGYVP 501
L L+ Q+K +GYVP
Sbjct: 579 LKELIGQIKVIGYVP 593
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 170/385 (44%), Gaps = 23/385 (5%)
Query: 63 TKTEVHLRLIQDFLQTDSKHLDSQKFNH--DFTGTNSTFG-SSNVFDQLLDTPVVDVEKL 119
T +H ++I+ + H D + NH F G G + +FD + V L
Sbjct: 29 TGKAIHAQMIR------AAHFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLL 82
Query: 120 IS------MHHD----LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN 169
+S H D L ++ LSTA+++ R+ G A+++G +
Sbjct: 83 MSGYASAGRHSDALALLKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEH 142
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
YV ++++ +Y +C + DA KVFE + ++ ++ ++I F + D + + R M
Sbjct: 143 PYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVG 202
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
+ + + ++ ++L C + L G H Q ++ + V ++L+ MY KC +
Sbjct: 203 EVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARD 262
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A F + K++VSW +++ Y Q+ A+ LF ++ + V+P+ T+ ++SC
Sbjct: 263 AHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAG 322
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAV 405
++ G S K G L + ++++ ++G + +A MP + N+V
Sbjct: 323 LAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSV 382
Query: 406 IWEAAESRLLLEPECAATHVQLANL 430
I A L E C + LA +
Sbjct: 383 IIGYAHHGLAREAMCVFHDMLLAEI 407
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 114/227 (50%), Gaps = 10/227 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + DL E ++ + + A+ SC ++ G A++TG + V ++L
Sbjct: 292 EDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNAL 351
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +YSK I DA++VF MP R+VVSW ++I +A + ++ M + + P+
Sbjct: 352 MNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSY 411
Query: 237 FTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA-VYVF 294
TF +L AC G + +G + MG + ++ + C+ G ++EA ++
Sbjct: 412 VTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFIL 471
Query: 295 NNMHGKDIVSWNSMIAG---YAQHGLAVRAIDLFEEMMKQRVKPDAI 338
+N G D+V+W S+++ Y +GL R + E++++ +KP+ +
Sbjct: 472 SNCIGTDVVAWKSLLSSCQVYKNYGLGHR---VAEQILQ--LKPNDV 513
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 234/410 (57%), Gaps = 24/410 (5%)
Query: 117 EKLISMHHDLHRERLKVD----ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
E+++ ++ ++R ++ D L V S + ++ G R G+ ++VY+
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSM 231
++L+ +Y++ + A VF MPVRNVVSW+A+IA +A+ + L +R MMR +
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 232 -LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
PN T S+L AC AL QG+ H +R G S + V ++L++MY +CG +E
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF+ MH +D+VSWNS+I+ Y HG +AI +FEEM+ P +TF+ V+ +C H
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHE 399
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-- 407
GLVEEGK F++M + HG+KP+++HY+C+VDLLGRA L+EA ++ M P +W
Sbjct: 400 GLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGS 459
Query: 408 --------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
E A RL LEP+ A +V LA++YA + WD+ RV+KL++ +GL
Sbjct: 460 LLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ PG W+E+ +Y F + D+ N + +I L L + MK GY+P+
Sbjct: 520 QKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQ 569
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 122/234 (52%), Gaps = 6/234 (2%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
++ + LI +YS + A KVF++ R + W A+ A + L LY M
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172
Query: 231 MLEPNDFTFTSILSACTGS----GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
+E + FT+T +L AC S L +G+ H R G+ S++ + +L+ MY + G
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR--VKPDAITFLGVI 344
V+ A YVF M +++VSW++MIA YA++G A A+ F EMM++ P+++T + V+
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+C +E+GK+ + + GL L S +V + GR G LE + +M
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 5/180 (2%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T+ ++ C +L H + G +A LI MY G+V+ A V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG--- 350
F+ + I WN++ G + L+ +M + V+ D T+ V+ +C
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 351 -GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +GK + + G + + +VD+ R G ++ A MP+ N V W A
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSA 253
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 232/422 (54%), Gaps = 19/422 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + M ++ LK DA LS+ + ++ G IR G ++VY+GSSL
Sbjct: 188 EDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSL 247
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+K I D+ +VF + R+ +SW +++A + Q + + L L+R M ++ + P
Sbjct: 248 VDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGA 307
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F+S++ AC L G+ H +R GF I +A++L+ MY KCGN++ A +F+
Sbjct: 308 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDR 367
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M+ D VSW ++I G+A HG A+ LFEEM +Q VKP+ + F+ V+++C H GLV+E
Sbjct: 368 MNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 427
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
YF+SM K +GL EL+HY+ V DLLGRAG LEEA DFI +M + P +W
Sbjct: 428 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCS 487
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
+ AE ++ E +V + N+YA W + A++R ++ KGL+ P C
Sbjct: 488 VHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPAC 547
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD-DASHKRTE 517
SWIE+ N + F + D+S+ + I L +++QM+ GYV + D D HKR
Sbjct: 548 SWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKREL 607
Query: 518 PF 519
F
Sbjct: 608 LF 609
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 149/276 (53%), Gaps = 1/276 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + + SC ++R G +R G ++Y G++L+ +YSK I KVF
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVF 163
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
E MP ++VVS+ +IA +AQ + L + R M S L+P+ FT +S+L + +
Sbjct: 164 ELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVL 223
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
+G+ H IR G S + + +SL+ MY K +E++ VF++++ +D +SWNS++AGY
Sbjct: 224 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYV 283
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q+G A+ LF +M+ +V+P A+ F VI +C H + GK + + G +
Sbjct: 284 QNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIF 343
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S +VD+ + G ++ AR +M ++ + V W A
Sbjct: 344 IASALVDMYSKCGNIQAARKIFDRMNLH-DEVSWTA 378
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 224/402 (55%), Gaps = 22/402 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L + + C R + G + GF N+ V SSL +Y KC + + ++
Sbjct: 183 DEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLI 242
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
MP +NVV+W +IA AQ + L+ Y MM+ + P+ TF S++S+C+ LG
Sbjct: 243 RAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLG 302
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
QG+ H + I+ G + V +SLISMY +CG +E ++ VF D+V W+SMIA Y
Sbjct: 303 QGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYG 362
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPEL 372
HG V AIDLF +M +++++ + +TFL ++ +C H GL E+G +FD M K+G+KP L
Sbjct: 363 FHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRL 422
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLL 415
+HY+C+VDLLGR G +EEA I+ MP+ + + W+ +E
Sbjct: 423 EHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFR 482
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L+P +V L+N++A + WD + VRK M+D+ LK PG SW+E+ N +++F DK
Sbjct: 483 LDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDK 542
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPEV----HEEKVDDASH 513
S+ + EI L L +MK GYVP++ H+ V+D +
Sbjct: 543 SHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEY 584
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 31/287 (10%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC---------- 183
+ S S + SC S ++ G L I +G ++ ++ + L+ LYSKC
Sbjct: 51 EPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110
Query: 184 -----------RVIIDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
++I+ Y K+F+EMP RNV +W A++A Q + L
Sbjct: 111 GVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLG 170
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
L+ M P++F S+L C G AL GR H + GF + V +SL MY
Sbjct: 171 LFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYM 230
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG++ E + M +++V+WN++IAG AQ+G +D + M +PD ITF+
Sbjct: 231 KCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVS 290
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
VISSC + +G+ + K G + S ++ + R G LE
Sbjct: 291 VISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLE 337
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 2/216 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+++ ++ + + D + ++SC + G I+ G V V SSL
Sbjct: 267 EEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSL 326
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I++YS+C + + KVF E +VV W+++IAA+ + ++L+ M LE ND
Sbjct: 327 ISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEAND 386
Query: 237 FTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF S+L AC+ G +G + + G ++ ++ + + G+VEEA +
Sbjct: 387 VTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIR 446
Query: 296 NMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+M K D+++W ++++ H A + EE+ +
Sbjct: 447 SMPVKADVITWKTLLSACKIHKKTEMARRISEEVFR 482
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 32/200 (16%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F+ +L +C +L G+ H I G S ++N L+++Y KCG ++ A+ +F M
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 299 GKDIVS-------------------------------WNSMIAGYAQHGLAVRAIDLFEE 327
K+I+S WN+M+AG Q + LF
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M + PD V+ C + G+ + K G + L S + + + G
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234
Query: 388 LEEARDFIKQMPIYPNAVIW 407
L E I+ MP N V W
Sbjct: 235 LGEGERLIRAMP-SQNVVAW 253
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/410 (35%), Positives = 234/410 (57%), Gaps = 24/410 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTR----NIRGGAPYQCLAIRTGFIANVYV 172
E+++ ++ ++R ++ D + + +C ++ ++ G R G+ ++VY+
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYI 219
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
++L+ +Y++ + A VF MPVRNVVSW+A+IA +A+ + L +R M
Sbjct: 220 MTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETK 279
Query: 233 E--PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ PN T S+L AC AL QGR H +R G S + V ++L++MY +CG ++
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVG 339
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF+ MH +D+VSWNS+I+ Y HG +AI +FEEM+ P +TF+ V+ +C H
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHE 399
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-- 407
GLVEEGK F+SM + HG+KP+++HY+C+VDLLGRA L+EA ++ M P +W
Sbjct: 400 GLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGS 459
Query: 408 --------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
E A RL LEP+ A +V LA++YA + WD+ RV+KL++ +GL
Sbjct: 460 LLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ PG W+E+ +Y F + D+ N + +I L L + MK GY+P+
Sbjct: 520 QKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQ 569
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 131/263 (49%), Gaps = 6/263 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ CG ++ G + G + ++ + LI +YS + A KVF++ R +
Sbjct: 84 ILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTI 143
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA----LGQGRS 257
W A+ A + L LY M +E + FT+T +L AC S L +G+
Sbjct: 144 YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKE 203
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H R G+ S++ + +L+ MY + G V+ A YVFN M +++VSW++MIA YA++G
Sbjct: 204 IHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGK 263
Query: 318 AVRAIDLFEEMMKQR--VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
A A+ F EMM + P+++T + V+ +C +E+G++ + + GL L
Sbjct: 264 AFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVI 323
Query: 376 SCVVDLLGRAGLLEEARDFIKQM 398
S +V + GR G L+ + +M
Sbjct: 324 SALVTMYGRCGKLDVGQRVFDRM 346
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 5/180 (2%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T+ ++ C +L G H + G +A LI MY G+V+ A V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH---- 349
F+ + I WN++ G + L+ +M + V+ D T+ V+ +C
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +GK + + G + + +VD+ R G ++ A MP+ N V W A
Sbjct: 195 ADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVR-NVVSWSA 253
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 230/408 (56%), Gaps = 37/408 (9%)
Query: 91 DFTGTNSTFGSS-NVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV------------DA 135
D G N + +FD+LL+ + +IS +D E L+ D
Sbjct: 263 DMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDG 322
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
T +T+CG+ ++ G I TGF NV V SSL+ +Y KC + ++ ++F+
Sbjct: 323 FTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDR 382
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP++N VSW+A++ + Q ++++R M L + F +IL C G A+ QG
Sbjct: 383 MPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAGLAAVRQG 438
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ HCQ IR G + + V ++L+ +Y KCG +E A +F+ M +++++WNSMI G+AQ+
Sbjct: 439 KEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQN 498
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDH 374
G A+ +F +M+K+ +KPD I+F+G++ +C H GLV+EG+ YF SM K +G+K ++H
Sbjct: 499 GRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEH 558
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLE 417
YSC+VDLLGRAGLLEEA I+ ++ +W A A+ + LE
Sbjct: 559 YSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE 618
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
P+ ++V LAN+Y V W+ A R+R+LMKD+G+ PG SWIE N
Sbjct: 619 PDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKN 666
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 197/423 (46%), Gaps = 42/423 (9%)
Query: 6 LQTCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKT 65
LQ C+ + ALQ LK++ +IS+ L+ +L L + +
Sbjct: 91 LQLCKSGELSGALQLLKSIDP----------GEISAKPVLYASL--LQTCTKVLAFNHGL 138
Query: 66 EVHLRLIQDFLQTDSKHLDSQ-----KFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLI 120
++H +I+ L+ D +S K DF T VFD L V+ +I
Sbjct: 139 QIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETR------KVFDGLFVKDVISWTSMI 192
Query: 121 SMHHDLHRER-------------LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI 167
S + + + ++ +A LS + +C +++ G + + + GF
Sbjct: 193 SGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFD 252
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE-LYRM 226
+N + S+LI ++ + + DA ++F+E+ + + WT+II+A + D L Y M
Sbjct: 253 SNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSM 312
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
R+ + P+ FTF ++L+AC G L QG+ H + I GF + V +SL+ MY KCG+
Sbjct: 313 QRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGS 372
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
V E+ +F+ M K+ VSW++++ GY Q+G I +F +M K D F ++ +
Sbjct: 373 VGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKV----DLYCFGTILRT 428
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
C V +GK + G ++ S +VDL + G +E A+ QMP+ N +
Sbjct: 429 CAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVR-NLIT 487
Query: 407 WEA 409
W +
Sbjct: 488 WNS 490
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I + ++ L+L + + + + S+L CT A G H I+ G
Sbjct: 90 ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGL 149
Query: 268 FSYIQVANSLISMYCKCG-NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
V NSL+++Y K G + E VF+ + KD++SW SMI+GY + G + +++LF
Sbjct: 150 EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW 209
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+M+ V+P+A T VI +C G ++ G+++ + G S ++D+ GR
Sbjct: 210 KMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNC 269
Query: 387 LLEEARDFIKQMPIYPNAVIWEAAESRL 414
L++AR ++ + P+A+ W + S L
Sbjct: 270 ALDDARQLFDEL-LEPDAICWTSIISAL 296
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 243/431 (56%), Gaps = 50/431 (11%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + + E + +D L+T ++ C S ++ G L +++G I V V +SLI++
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 415
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NSML 232
Y+KC + A +F M +++VSWT++I A +Q + E + M N+ML
Sbjct: 416 YAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAML 475
Query: 233 -------------------------EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
P+ T+ ++ C GA G +T+++G
Sbjct: 476 GAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 535
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
VAN++I+MY KCG + EA VF+ ++ KDIVSWN+MI GY+QHG+ +AI++F++
Sbjct: 536 ILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 595
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
++K+ KPD I+++ V+S C H GLV+EGK YFD M + H + P L+H+SC+VDLLGRAG
Sbjct: 596 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAG 655
Query: 387 LLEEARDFIKQMPIYPNAVIWEAAESRLLLE-----PECAATHV------------QLAN 429
L EA+D I +MP+ P A +W A S + E AA HV +A
Sbjct: 656 HLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 715
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA D +A++RKLM+DKG+K NPG SW+E+ N V+ F+A+D S+ ++ I LD
Sbjct: 716 IYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDE 775
Query: 490 LVDQMKTLGYV 500
L++++ LGYV
Sbjct: 776 LMEKIARLGYV 786
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 150/326 (46%), Gaps = 33/326 (10%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + M D+ + +++D++ ++++T+C ++R G IR + YV S+
Sbjct: 251 VREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASA 310
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
L+ LY+KC +A VF + RN V+WT +IA F Q +EL+ MR ++ +
Sbjct: 311 LVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLD 370
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
F +++S C L GR H ++ G + V+NSLISMY KC N++ A +F
Sbjct: 371 QFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFR 430
Query: 296 NMHGKDIVS-------------------------------WNSMIAGYAQHGLAVRAIDL 324
M+ KDIVS WN+M+ Y QHG + +
Sbjct: 431 FMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRM 490
Query: 325 FEEMMKQR-VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+ M+ ++ V+PD +T++ + C G + G K GL + + V+ +
Sbjct: 491 YNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYS 550
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + EAR + + + V W A
Sbjct: 551 KCGRILEARKVFDFLNV-KDIVSWNA 575
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 101/178 (56%)
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
++ +S++ Y K + A ++F+ MP R+VVSW +++A +Q +V L++ M++
Sbjct: 204 IFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 263
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
+ + T+TS L+AC +L G+ H Q IR VA++L+ +Y KCG +E
Sbjct: 264 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKE 323
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
A VFN++H ++ V+W +IAG+ QHG +++LF +M + + D +IS C
Sbjct: 324 AKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 46/299 (15%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMM 227
NV + ++ Y K + DA ++F MP R+V SW +++ + Q Q LE + M
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM----GFFSYIQVANSLISMYCK 283
R+ PN FTF + +C GALG+ RS Q + M G VA +L+ M+ +
Sbjct: 130 RSGDSSPNAFTFAYAMKSC---GALGE-RSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185
Query: 284 CG-------------------------------NVEEAVYVFNNMHGKDIVSWNSMIAGY 312
CG V+ A+ +F++M +D+VSWN M++
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
+Q G A+D+ +M + V+ D+ T+ +++C + GK + ++ P +
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN--LPCI 303
Query: 373 DHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLAN 429
D Y S +V+L + G +EA+ + N V W + L+ C V+L N
Sbjct: 304 DPYVASALVELYAKCGCFKEAKGVFNSLHDRNN-VAWTVLIAG-FLQHGCFTESVELFN 360
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 34/193 (17%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC------------- 284
F L +C GAL R+ H + + +G S + + N+L+ Y C
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 285 -------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + +AV +F M +D+ SWN++++GY Q + +++ F
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 326 EEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
M + P+A TF + SC G + K G + + D + +VD+ R
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185
Query: 385 AGLLEEA-RDFIK 396
G ++ A R F++
Sbjct: 186 CGTVDLASRLFVR 198
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/407 (37%), Positives = 226/407 (55%), Gaps = 25/407 (6%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + M ++ LK D+ LS+ + +I G +IR G A++YV SSL
Sbjct: 221 EETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSL 280
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC + D+ +VF + R+ +SW +IIA Q D L +R M + ++P
Sbjct: 281 IDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKS 340
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
++F+SI+ AC L G+ H R GF I +A+SL+ MY KCGN+ A +F+
Sbjct: 341 YSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDR 400
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D+VSW +MI G A HG A AI+LFE+M + +K V+++C HGGLV+E
Sbjct: 401 MRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEA 453
Query: 357 KVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
YF+SM + G+ P ++HY+ V DLLGRAG LEEA DFI M I P IW
Sbjct: 454 WKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACR 513
Query: 408 --------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
E +R+L ++P ++ LAN+Y+ R W +AA+ R M+ G++ P C
Sbjct: 514 VHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPAC 573
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
SWIE+ N VY F A D+S+ +I ++ LV+ M+ GYVP+ E
Sbjct: 574 SWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSE 620
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 33/311 (10%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA- 189
L D + + + SC ++ G IR G ++Y G++L+ +YSK R + ++
Sbjct: 102 LYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESG 161
Query: 190 -------------------------------YKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
K+FE MP +++VSW IIA A+ +
Sbjct: 162 RQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYE 221
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L + R M + L+P+ FT +S+L + + +G+ H +IR G + I VA+SLI
Sbjct: 222 ETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLI 281
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY KC V ++ VF + +D +SWNS+IAG Q+GL + F +M+ ++KP +
Sbjct: 282 DMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSY 341
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+F ++ +C H + GK + ++G + S +VD+ + G + A+ +M
Sbjct: 342 SFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRM 401
Query: 399 PIYPNAVIWEA 409
+ + V W A
Sbjct: 402 RLR-DMVSWTA 411
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 32/238 (13%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+YS ++ D+ ++F + ++W ++I + L + M S L P+
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA-------- 290
F S+L +C L G S H IR+G + N+L++MY K +EE+
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 291 -VY-----------------------VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
V+ +F M KD+VSWN++IAG A++GL + +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
EM +KPD+ T V+ + GK + GL ++ S ++D+ +
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAK 286
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 230/408 (56%), Gaps = 37/408 (9%)
Query: 91 DFTGTNSTFGSS-NVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV------------DA 135
D G N + +FD+LL+ + +IS +D E L+ D
Sbjct: 204 DMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDG 263
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
T +T+CG+ ++ G I TGF NV V SSL+ +Y KC + ++ ++F+
Sbjct: 264 FTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDR 323
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP++N VSW+A++ + Q ++++R M L + F +IL C G A+ QG
Sbjct: 324 MPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAGLAAVRQG 379
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ HCQ IR G + + V ++L+ +Y KCG +E A +F+ M +++++WNSMI G+AQ+
Sbjct: 380 KEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQN 439
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDH 374
G A+ +F +M+K+ +KPD I+F+G++ +C H GLV+EG+ YF SM K +G+K ++H
Sbjct: 440 GRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEH 499
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLE 417
YSC+VDLLGRAGLLEEA I+ ++ +W A A+ + LE
Sbjct: 500 YSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE 559
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
P+ ++V LAN+Y V W+ A R+R+LMKD+G+ PG SWIE N
Sbjct: 560 PDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKN 607
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 197/423 (46%), Gaps = 42/423 (9%)
Query: 6 LQTCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKT 65
LQ C+ + ALQ LK++ +IS+ L+ +L L + +
Sbjct: 32 LQLCKSGELSGALQLLKSIDP----------GEISAKPVLYASL--LQTCTKVLAFNHGL 79
Query: 66 EVHLRLIQDFLQTDSKHLDSQ-----KFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLI 120
++H +I+ L+ D +S K DF T VFD L V+ +I
Sbjct: 80 QIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETR------KVFDGLFVKDVISWTSMI 133
Query: 121 SMHHDLHRER-------------LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI 167
S + + + ++ +A LS + +C +++ G + + + GF
Sbjct: 134 SGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFD 193
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE-LYRM 226
+N + S+LI ++ + + DA ++F+E+ + + WT+II+A + D L Y M
Sbjct: 194 SNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSM 253
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
R+ + P+ FTF ++L+AC G L QG+ H + I GF + V +SL+ MY KCG+
Sbjct: 254 QRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGS 313
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
V E+ +F+ M K+ VSW++++ GY Q+G I +F +M K D F ++ +
Sbjct: 314 VGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRT 369
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
C V +GK + G ++ S +VDL + G +E A+ QMP+ N +
Sbjct: 370 CAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPV-RNLIT 428
Query: 407 WEA 409
W +
Sbjct: 429 WNS 431
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I + ++ L+L + + + + S+L CT A G H I+ G
Sbjct: 31 ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGL 90
Query: 268 FSYIQVANSLISMYCKCG-NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
V NSL+++Y K G + E VF+ + KD++SW SMI+GY + G + +++LF
Sbjct: 91 EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW 150
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+M+ V+P+A T VI +C G ++ G+++ + G S ++D+ GR
Sbjct: 151 KMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNC 210
Query: 387 LLEEARDFIKQMPIYPNAVIWEAAESRL 414
L++AR ++ + P+A+ W + S L
Sbjct: 211 ALDDARQLFDEL-LEPDAICWTSIISAL 237
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 236/405 (58%), Gaps = 18/405 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E +S + +K+D L + + S S + ++ CL I+TGF A V ++L
Sbjct: 23 EDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNAL 82
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+K + A VF +M ++VVSWT+++ ++ + ++L+ MR S + P+
Sbjct: 83 IDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQ 142
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
S+LSAC + G+ H ++ G S + V NSL++MY KCG++ +A F+N
Sbjct: 143 IAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDN 202
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D++SW ++I GYAQ+G ++ +++M+ KPD ITF+G++ +C H GL+ G
Sbjct: 203 MPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSG 262
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
+ YF++M K +G+KP +HY+C++DLLGR+G L EA+ + QM + P+AV+W+
Sbjct: 263 RAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACR 322
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AA++ LEP + +V L+N+Y+ W+ AAR+R+LM+ +G+ PG
Sbjct: 323 VHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGY 382
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
SWIE + V F +ED+++ +EI +D ++ +K GYVP++
Sbjct: 383 SWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDM 427
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 1/214 (0%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
M + VSW ++I +E + L ++ MR+ ++ +++T S+L++ +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
S HC I+ GF +Y V N+LI MY K G ++ A+ VF+ M KD+VSW S++ GY+ +
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G AI LF +M V PD I V+S+C +++ G+ ++ K GL+ L
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +V + + G + +A MP + + W A
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPT-RDVISWTA 213
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 237/422 (56%), Gaps = 27/422 (6%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E IS+++ + L D + +C + + G IR+G ++V+VG++L
Sbjct: 84 ELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAAL 143
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC + A +VF+++ R+VV W +++A ++Q Q D L L R+M + L+P +
Sbjct: 144 IDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTE 203
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF ++A +G L QG+ H + R GF S +V +L+ MY K G+V A +F
Sbjct: 204 GTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFEL 263
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ K +VSWN+MI GYA HG A A+DLF+E MK +V PD ITF+GV+++C HGGL+ EG
Sbjct: 264 LEEKRVVSWNAMITGYAMHGHANEALDLFKE-MKGKVLPDHITFVGVLAACSHGGLLNEG 322
Query: 357 KVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
K++F SM + + P + HY+C++DLLG G LEEA I +M + P+A +W
Sbjct: 323 KMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCK 382
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
A E + LEP+ +V L+N+YA WD AR+R LM +KGLK + C
Sbjct: 383 IHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIAC 442
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV--------HEEKVDD 510
SWIE+ N V+ F +ED S+ + I L MK GY P+V +EKVD
Sbjct: 443 SWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDM 502
Query: 511 AS 512
S
Sbjct: 503 VS 504
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 132/261 (50%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
S+ ++ + SC + I G + G N + + L+ LY C + +A+ +F+
Sbjct: 2 SYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDR 61
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ RN+ W +I +A ++ + LY MR+ L P+ FTF +L AC+ A+ +G
Sbjct: 62 ISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG 121
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H IR G S + V +LI MY KCG VE A VF+ + +D+V WNSM+A Y+Q+
Sbjct: 122 KKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQN 181
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G ++ L M +KP TF+ I++ GL+ +GK +HG +
Sbjct: 182 GQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVK 241
Query: 376 SCVVDLLGRAGLLEEARDFIK 396
+ ++D+ ++G + AR +
Sbjct: 242 TALMDMYAKSGSVNVARSLFE 262
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 245/479 (51%), Gaps = 66/479 (13%)
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH---------HDLHRER----LKVDAS 136
H + G+ VFD L+ VV L S + D+ RE +K +
Sbjct: 207 HAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPM 266
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+S+ + +C ++++ G A+R G + N++V S+L++LY+KC + +A VF+ M
Sbjct: 267 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLM 326
Query: 197 PVRNVVSWTAIIAAFAQE------------------------WQV-----------DMCL 221
P R+VVSW ++ A+ + W + +
Sbjct: 327 PHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 386
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
E++R M+ +PN+ T +SIL AC+ S L G+ HC R + +L+ MY
Sbjct: 387 EMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMY 446
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++ + VF+ M KD+V+WN+MI A HG A+ LF++M+ RV+P+++TF
Sbjct: 447 AKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFT 506
Query: 342 GVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
GV+S C H LVEEG F+SM + H ++P+ +HYSCVVD+ RAG L EA FI+ MP+
Sbjct: 507 GVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPM 566
Query: 401 YPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
P A W A A+ +EP +V L N+ + W +A++V
Sbjct: 567 EPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQV 626
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
R LMK++G+ PGCSW+++ N V+ F DKSN +I LD LV++MK GY P+
Sbjct: 627 RILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPD 685
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 130/252 (51%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I ++ L +K D A +C + + A R G +++V+VG++LI
Sbjct: 149 IKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHA 208
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC+ + A +VF+++ VR+VVSWT++ + + + ++++R M S ++PN T
Sbjct: 209 YGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTV 268
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+SIL AC L G+ H +R G + V ++L+S+Y KC +V EA VF+ M
Sbjct: 269 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 328
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+VSWN ++ Y ++ + LF +M + V+ D T+ VI C G EE
Sbjct: 329 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 388
Query: 360 FDSMAKHGLKPE 371
F M K G KP
Sbjct: 389 FRKMQKMGFKPN 400
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A ++F+ +P + + + +I+A + +++Y ++ ++P+ F + AC
Sbjct: 117 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 176
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
SG + + H R G S + V N+LI Y KC VE A VF+++ +D+VSW S+
Sbjct: 177 SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSL 236
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ Y + G + +D+F EM VKP+ +T ++ +C ++ GK +HG+
Sbjct: 237 SSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGM 296
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L S +V L + + EAR MP + + V W
Sbjct: 297 VVNLFVCSALVSLYAKCLSVREARMVFDLMP-HRDVVSWNG 336
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI + G+ A +F+N+ D + +++I+ HGL+ AI ++ + ++ +KPD
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
FL +C G K D + G+ ++ + ++ G+ +E AR
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223
Query: 397 QMPIYPNAVIWEAAES 412
+ + + V W + S
Sbjct: 224 DL-VVRDVVSWTSLSS 238
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 231/400 (57%), Gaps = 20/400 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + + E + D L + +++C ++ G +AI+TG +++V V +SLI
Sbjct: 383 KAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLI 442
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
+YSKC+ + +A +VF + +NVVSWT++I + L +R M+ SM +PN
Sbjct: 443 DMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESM-KPNSV 501
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T S+LSAC GAL +G+ H +R G + N+++ MY +CG A+ FN+
Sbjct: 502 TLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ 561
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
KD+ +WN ++ GYAQ G A A++LF++M++ + PD ITF+ ++ +C G+V EG
Sbjct: 562 K-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGL 620
Query: 358 VYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------- 407
YF+ M K+ L P L HY+CVVD+LGRAG L++A DFI+ MPI P+A IW
Sbjct: 621 EYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRI 680
Query: 408 -------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
E A R+ + + ++ L NLYAG WD+ ++VR LM+++GL +PGCS
Sbjct: 681 HRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCS 740
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
W+EI V+ F + D S+++ EI VLD +MK G+
Sbjct: 741 WVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGF 780
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 152/291 (52%), Gaps = 1/291 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ ++++H + ++ + + + +C +I G IR GF ++V VG++L
Sbjct: 180 DEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNAL 239
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
IT+Y KC I +A +F++MP R+ +SW A+I+ + + LEL+ MMR ++P+
Sbjct: 240 ITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDL 299
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T T++ SAC GR H ++ F I + NSLI MY G +EEA VF+
Sbjct: 300 ITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSR 359
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M KD+VSW +MIA H L +A++ ++ M + + PD IT + V+S+C G ++ G
Sbjct: 360 MESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG 419
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ K GL + + ++D+ + ++ A + + + N V W
Sbjct: 420 IRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNIS-GKNVVSW 469
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 131/246 (53%), Gaps = 1/246 (0%)
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
V +G++L++++ + ++DA+ VF +M R+V SW ++ +A+ D L LY M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
+ + PN +TF S+L C G + +G+ H IR GF S + V N+LI+MY KCG++
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A +F+ M +D +SWN+MI+GY ++G + ++LF M + V PD IT V S+C
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ + K ++ + ++ + G LEEA +M + V W A
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRME-SKDVVSWTA 370
Query: 410 AESRLL 415
+ L+
Sbjct: 371 MIASLV 376
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 3/229 (1%)
Query: 131 LKVDASF--LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
L VD ++T ++C N R G +++ F ++ + +SLI +YS + +
Sbjct: 293 LSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEE 352
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF M ++VVSWTA+IA+ +E Y+MM + P++ T S+LSAC
Sbjct: 353 AETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACAC 412
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
G L G H I+ G S++ V+NSLI MY KC V+ A+ VF N+ GK++VSW S+
Sbjct: 413 IGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSL 472
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
I G + + A+ LF MK+ +KP+++T + V+S+C G + GK
Sbjct: 473 ILGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGK 520
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 227/406 (55%), Gaps = 20/406 (4%)
Query: 118 KLISMHHDLHRERLKVDA--SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+++S+ H + +E L +D + L++ + S S+ I LA + G +++ +V +
Sbjct: 390 EVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVING 449
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI Y KC + A KVF+E +++S T ++ A +Q + ++L+ M LEP+
Sbjct: 450 LIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPD 509
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
F +S+L+ACT A QG+ H I+ F S + N+L+ Y KCG++E+A F+
Sbjct: 510 SFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFS 569
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ + IVSW++MI G AQHG RA+DLF M+ + V P+ IT V+S+C H GLV++
Sbjct: 570 GLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDD 629
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
K YF+SM + G+ +HY+C++D+LGRAG LE+A + + MP NA +W
Sbjct: 630 AKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGAS 689
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AAE LEPE + THV LAN YA WD+ A+VRKLMKD +K P
Sbjct: 690 RVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPA 749
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
SW+EI + V+ F DKS+ +I L L D M GYVP V
Sbjct: 750 MSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNV 795
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 9/266 (3%)
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM----PVRNVVSWT 205
++R GA LA+ T + +V+V ++L+ +Y ++ +A ++F+E RN VSW
Sbjct: 115 DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWN 174
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
+I+A+ + Q + ++R M S PN+F F+ +++ACTGS L GR H +R
Sbjct: 175 TMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRT 234
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G+ + AN+L+ MY K G++E A VF M D+VSWN+ I+G HG RA++L
Sbjct: 235 GYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELL 294
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV--VDLLG 383
+M + P+ T V+ +C G G+ M K + D + V VD+
Sbjct: 295 LQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVK--AVADFDEFVAVGLVDMYA 352
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G L++AR MP + ++W A
Sbjct: 353 KHGFLDDARKVFDFMP-RRDLILWNA 377
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 4/201 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S V +C +R++ G +RTG+ +V+ ++L+ +YSK I A VFE+MP
Sbjct: 208 FSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMP 267
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VVSW A I+ LEL M++S L PN FT +S+L AC G+GA GR
Sbjct: 268 AADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQ 327
Query: 258 AHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
H ++ F ++ V L+ MY K G +++A VF+ M +D++ WN++I+G +
Sbjct: 328 IHGFMVKAVADFDEFVAVG--LVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHD 385
Query: 316 GLAVRAIDLFEEMMKQRVKPD 336
G + LF M K+ + D
Sbjct: 386 GRHGEVLSLFHRMRKEGLDLD 406
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 139/276 (50%), Gaps = 10/276 (3%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ +A+ G++R++ GA +++G +A + L+TLYS+CR+ A VF+E+P
Sbjct: 7 IGSALARFGTSRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIP 64
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
VSW++++ A++ L +R MR + N+F +L C G
Sbjct: 65 DPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAPDVRFGA--Q 121
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG----KDIVSWNSMIAGYA 313
H + + VAN+L+++Y G V+EA +F+ G ++ VSWN+MI+ Y
Sbjct: 122 VHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYV 181
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
++ + AI +F EM+ +P+ F V+++C +E G+ ++ + G + ++
Sbjct: 182 KNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVF 241
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD+ + G +E A ++MP + V W A
Sbjct: 242 TANALVDMYSKLGDIEMAATVFEKMPA-ADVVSWNA 276
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 2/264 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ + +C G ++ + +V L+ +Y+K + DA KVF+ MP
Sbjct: 309 LSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP 368
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM--LEPNDFTFTSILSACTGSGALGQG 255
R+++ W A+I+ + + + L L+ MR L+ N T S+L + S A+
Sbjct: 369 RRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHT 428
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H ++G S V N LI Y KCG ++ A+ VF DI+S +M+ +Q
Sbjct: 429 RQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQC 488
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
AI LF +M+++ ++PD+ ++++C E+GK + K ++
Sbjct: 489 DHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAG 548
Query: 376 SCVVDLLGRAGLLEEARDFIKQMP 399
+ +V + G +E+A +P
Sbjct: 549 NALVYAYAKCGSIEDADMAFSGLP 572
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E I + + R+ L+ D+ LS+ + +C S G I+ F ++V+ G++L
Sbjct: 492 EDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNAL 551
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ Y+KC I DA F +P R +VSW+A+I AQ L+L+ M + + PN
Sbjct: 552 VYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNH 611
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
T TS+LSAC +G + + + ++++ G + +I + + G +E+A+ +
Sbjct: 612 ITLTSVLSACNHAGLVDDAKK-YFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELV 670
Query: 295 NNM-HGKDIVSWNSMIAGYAQH 315
NNM + W +++ H
Sbjct: 671 NNMPFQANAAVWGALLGASRVH 692
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/440 (34%), Positives = 234/440 (53%), Gaps = 53/440 (12%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPY--QCLAIRTGFI--ANVYVGSSLITLYSKC- 183
ER+ +D ++ +++C + G Q + ++ F+ A + V ++L+T YSKC
Sbjct: 288 ERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCG 347
Query: 184 -----RVIID-------------------------AYKVFEEMPVRNVVSWTAIIAAFAQ 213
R I D A +VFEEMP +N +SW +++ +
Sbjct: 348 NIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVH 407
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ L+L+ MR+ ++P D+T+ ++AC GAL G+ H +++GF
Sbjct: 408 GGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSA 467
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
N+LI+MY +CG V+EA +F M D VSWN+MI+ QHG A++LF+ M+ + +
Sbjct: 468 GNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGI 527
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEAR 392
PD I+FL V+++C H GLV+EG YF+SM + G+ P DHY+ ++DLLGRAG + EAR
Sbjct: 528 YPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEAR 587
Query: 393 DFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVR 435
D IK MP P IWE AA+ + P+ T++ L+N Y+
Sbjct: 588 DLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAG 647
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
CW AARVRKLM+D+G+K PGCSWIE N V+ F D + E+ L+ + +M+
Sbjct: 648 CWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMR 707
Query: 496 TLGYVPEVHEEKVDDASHKR 515
LGYVP+ D H++
Sbjct: 708 KLGYVPDTKVVLHDMEPHQK 727
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 148/302 (49%), Gaps = 47/302 (15%)
Query: 134 DASFLSTAVTSCGS---TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR---VII 187
D SF TA+ S G ++R A C +++G + V ++L+ LY KC
Sbjct: 157 DYSF--TALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATR 214
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD----------------------------M 219
DA KV +EMP ++ ++WT ++ + + V M
Sbjct: 215 DARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGM 274
Query: 220 CLELYRMMRNSMLEP---NDFTFTSILSACTGSGALGQGRSAHCQTIRM--GFF--SYIQ 272
+E + + R +LE ++FTFTS+LSAC G G+S H Q IR+ F + +
Sbjct: 275 AVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALP 334
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V N+L++ Y KCGN+ A +F+NM KD+VSWN++++GY + +A+++FEEM +
Sbjct: 335 VNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK- 393
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ ++++ ++S HGG E+ F+ M +KP Y+ + G G L+ +
Sbjct: 394 ---NELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGK 450
Query: 393 DF 394
Sbjct: 451 QL 452
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 39/223 (17%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNS 230
+SL+ Y+ + A F+ +P R+ V A+I+A+A+ + ++R ++ +
Sbjct: 92 TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSA--HCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
L P+D++FT++LSA + A HC ++ G + V N+L+++Y KC + E
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211
Query: 289 ---EAVYVFNNMHGKDIVSWNSM-------------------------------IAGYAQ 314
+A V + M KD ++W +M I+GY
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
G+AV A +LF M+ +RV D TF V+S+C + GL GK
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGK 314
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 235/435 (54%), Gaps = 50/435 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + LHR + S L+++ +C + G LA++ G N YV ++L
Sbjct: 400 EEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNAL 459
Query: 177 ITLYSKCR-------------------------------VIIDAYKVFEEMPVRNVVSWT 205
I++Y KCR ++ DA +F+ M R+VVSWT
Sbjct: 460 ISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWT 519
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
II+A+AQ + D +E ++ M + +PN T +LS C G G+ G+ H I+
Sbjct: 520 TIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKH 579
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G S + VAN+L+SMY KCG ++ VF++M +DI +WN+ I G AQHGL AI ++
Sbjct: 580 GMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMY 638
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
E M V P+ +TF+G++++C H GLV+EG +F SM++ +GL P L+HY+C+VDLLGR
Sbjct: 639 EHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGR 698
Query: 385 AGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQL 427
G ++ A FI MPI P+ VIW AAE EP A +V L
Sbjct: 699 TGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVML 758
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N+Y+ + W + A +RK+MK +G+ PGCSW++I N V+ F DK + ++ EI L
Sbjct: 759 SNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTL 818
Query: 488 DFLVDQMKTLGYVPE 502
L ++ GYVP+
Sbjct: 819 QDLYTLLRGTGYVPD 833
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 8/215 (3%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++IT Y + ++ +A ++F+ MP RN +SW +IA +AQ + + L+L + + + +
Sbjct: 356 NAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGML 415
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMG--FFSYIQVANSLISMYCKCGNVEEAV 291
P+ + TS AC+ GAL GR H ++ G F SY V N+LISMY KC N+E
Sbjct: 416 PSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSY--VCNALISMYGKCRNMEYVR 473
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VFN M KD VSWNS IA Q+ + A +F+ M+ + D +++ +IS+
Sbjct: 474 QVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSR----DVVSWTTIISAYAQAE 529
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+E +F +M KP + ++ + G G
Sbjct: 530 RGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLG 564
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 123/235 (52%), Gaps = 10/235 (4%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S++T Y R ++DA+ +F++MP RN+V+WT +I+ + + Q +++RMM +
Sbjct: 161 NSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGAS 220
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK-CGNVEEAVY 292
P+ F S+LSA TG LG ++ GF S + + S++++Y + ++ A+
Sbjct: 221 PDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIK 280
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
F+ M ++ +W++MIA + G AI ++ + + P L ++ C G
Sbjct: 281 FFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARC---GR 336
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ E ++ F+ + P + ++ ++ + G+++EA++ +MP + N + W
Sbjct: 337 ITEARILFEQIP----DPIVVSWNAMITGYMQNGMVDEAKELFDRMP-FRNTISW 386
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 143/288 (49%), Gaps = 16/288 (5%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H E D S ++ +++ +++ + L ++TGF ++V +G+S++ +Y++
Sbjct: 214 MHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDAS 273
Query: 186 IID-AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-PNDFTFTSIL 243
+D A K F+ M RN +W+ +IAA + ++D + +Y R+ + P+ T++L
Sbjct: 274 ALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYG--RDPVKSIPSQ---TALL 328
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
+ G + + R Q S+ N++I+ Y + G V+EA +F+ M ++ +
Sbjct: 329 TGLARCGRITEARILFEQIPDPIVVSW----NAMITGYMQNGMVDEAKELFDRMPFRNTI 384
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SW MIAGYAQ+G + A+DL + + + + P + +C H G +E G+
Sbjct: 385 SWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLA 444
Query: 364 AKHGLKPELDHYSC--VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K G + + Y C ++ + G+ +E R +M + + V W +
Sbjct: 445 VKAGC--QFNSYVCNALISMYGKCRNMEYVRQVFNRMRV-KDTVSWNS 489
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 17/223 (7%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+A +VF+ MP R++++W ++I+A+ LE R++ +++ N T T +LS
Sbjct: 51 EAREVFDAMPHRDIIAWNSMISAYCNSGM----LEDARILFDAISGGNVRTATILLS--- 103
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVA-NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G GR + + G VA N+++S Y + G++ A +F+ M +D+ SWN
Sbjct: 104 --GYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWN 161
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
SM+ GY V A +LF++M ++ + + G + +HG +G F M
Sbjct: 162 SMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHG----KGWDIFRMMHHE 217
Query: 367 GLKPELDHYSCV---VDLLGRAGLLEEARDFIKQMPIYPNAVI 406
G P+ +++ V V L G+LE R + + + VI
Sbjct: 218 GASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVI 260
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 45/182 (24%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
NV + L++ Y++ ++DA +VF+ MP RN V+W A+++ + Q + M L+ M
Sbjct: 93 GNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAM 152
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
D T NS+++ YC +
Sbjct: 153 -----PSRDVT----------------------------------SWNSMVTGYCHSRQM 173
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYA---QHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
+A +F M +++V+W MI+GY QHG + D+F M + PD F V+
Sbjct: 174 VDAWNLFKQMPQRNLVTWTVMISGYVRIEQHG---KGWDIFRMMHHEGASPDQSNFASVL 230
Query: 345 SS 346
S+
Sbjct: 231 SA 232
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
+ G + EA VF+ M +DI++WNSMI+ Y G+ A LF+ + V+ I
Sbjct: 45 RLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATI---- 100
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++S G V + + FD M + SC V + G + AR MP
Sbjct: 101 LLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYV----QNGDITMARRLFDAMP 153
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 231/400 (57%), Gaps = 20/400 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + + E + D L + +++C ++ G +AI+TG +++V V +SLI
Sbjct: 383 KAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLI 442
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
+YSKC+ + +A +VF + +NVVSWT++I + L +R M+ SM +PN
Sbjct: 443 DMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESM-KPNSV 501
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T S+LSAC GAL +G+ H +R G + N+++ MY +CG A+ FN+
Sbjct: 502 TLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ 561
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
KD+ +WN ++ GYAQ G A A++LF++M++ + PD ITF+ ++ +C G+V EG
Sbjct: 562 K-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGL 620
Query: 358 VYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------- 407
YF+ M K+ L P L HY+CVVD+LGRAG L++A DFI+ MPI P+A IW
Sbjct: 621 EYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRI 680
Query: 408 -------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
E A R+ + + ++ L NLYAG WD+ ++VR LM+++GL +PGCS
Sbjct: 681 HRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCS 740
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
W+EI V+ F + D S+++ EI VLD +MK G+
Sbjct: 741 WVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGF 780
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 152/291 (52%), Gaps = 1/291 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ ++++H + ++ + + + +C +I G IR GF ++V VG++L
Sbjct: 180 DEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNAL 239
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
IT+Y KC I +A +F++MP R+ +SW A+I+ + + LEL+ MMR ++P+
Sbjct: 240 ITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDL 299
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T T++ SAC GR H ++ F I + NSLI MY G +EEA VF+
Sbjct: 300 ITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSR 359
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M KD+VSW +MIA H L +A++ ++ M + + PD IT + V+S+C G ++ G
Sbjct: 360 MESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG 419
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ K GL + + ++D+ + ++ A + + + N V W
Sbjct: 420 IRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNIS-GKNVVSW 469
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 131/246 (53%), Gaps = 1/246 (0%)
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
V +G++L++++ + ++DA+ VF +M R+V SW ++ +A+ D L LY M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
+ + PN +TF S+L C G + +G+ H IR GF S + V N+LI+MY KCG++
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A +F+ M +D +SWN+MI+GY ++G + ++LF M + V PD IT V S+C
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ + K ++ + ++ + G LEEA +M + V W A
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRME-SKDVVSWTA 370
Query: 410 AESRLL 415
+ L+
Sbjct: 371 MIASLV 376
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 3/229 (1%)
Query: 131 LKVDASF--LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
L VD ++T ++C N R G +++ F ++ + +SLI +YS + +
Sbjct: 293 LSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEE 352
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF M ++VVSWTA+IA+ +E Y+MM + P++ T S+LSAC
Sbjct: 353 AETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACAC 412
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
G L G H I+ G S++ V+NSLI MY KC V+ A+ VF N+ GK++VSW S+
Sbjct: 413 IGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSL 472
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
I G + + A+ LF MK+ +KP+++T + V+S+C G + GK
Sbjct: 473 ILGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLSACARIGALMRGK 520
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 243/440 (55%), Gaps = 52/440 (11%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
++E L+ L+ LK D L++ +++C + + G +R + VG+
Sbjct: 255 NLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN 314
Query: 175 SLITLYSK------CRVIID---------------------------AYKVFEEMPVRNV 201
+LI++Y+K R+I++ A ++F ++ R+V
Sbjct: 315 ALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDV 374
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
V+WTA+I + Q + LEL+R+M N EPN +T ++LS + L G+ H
Sbjct: 375 VAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHAS 434
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYAQHGLAVR 320
I+ G S V N+LI+MY K GN+ A VF+ +G K+IVSW SMI AQHGL
Sbjct: 435 AIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKE 494
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVV 379
AI+LFE M+ +KPD IT++GV+S+C H GLVE+G+ Y++ M + H ++P L HY+C++
Sbjct: 495 AINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMI 554
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAA 422
DL GRAGLL+EA FI+ MPI P+ + W AAE LL++P +
Sbjct: 555 DLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSG 614
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
++ LAN+Y+ W+ AA+ RKLMKD+G++ G SWI I N V+ F ED + + E
Sbjct: 615 AYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDE 674
Query: 483 ILPVLDFLVDQMKTLGYVPE 502
I ++ + +++K +G++P+
Sbjct: 675 IYKLMAEIWEEIKKMGFIPD 694
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 152/350 (43%), Gaps = 72/350 (20%)
Query: 108 LLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI 167
L D + K+IS ER+ +S ++SC + + + G ++ G
Sbjct: 122 LFDNAIWMFAKMIS-------ERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLG 174
Query: 168 ANVYVGSSLITLYSKC------RVIIDAYKV-------------------------FEEM 196
+ V V +SL+ +Y+KC +V+ D V FE+M
Sbjct: 175 SCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKM 234
Query: 197 PVRNVVSWTAIIAAFAQE-WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
P R++VSW ++I+ ++Q+ + ++ + +M+ L+P++FT SILSAC L G
Sbjct: 235 PDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIG 294
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKC------------------------------- 284
+ H +R + V N+LISMY K
Sbjct: 295 KQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYT 354
Query: 285 --GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
GNV+ A +FN + +D+V+W +MI GY Q+GL A++LF M+ + +P++ T
Sbjct: 355 KLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAA 414
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
++S ++E GK S K G + ++ + + G + A+
Sbjct: 415 MLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAK 464
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 63/258 (24%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV----------- 201
G C I+ G VY+ ++L+T Y+K + A+ VF+EMP+++
Sbjct: 28 AGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYA 87
Query: 202 --------------------VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
VSWTAII + Q D + ++ M + + P+ FT ++
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN--------------- 286
+LS+C + L GR H +++G S + VA SL++MY KCG+
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 287 ----------------VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
E A F M +DIVSWNSMI+GY+Q G + A+ +F +M+
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267
Query: 331 Q-RVKPDAITFLGVISSC 347
+ +KPD T ++S+C
Sbjct: 268 EPSLKPDNFTLASILSAC 285
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 240/431 (55%), Gaps = 30/431 (6%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHH-------------DLHRERLKVDASFLSTAVTSCGS 147
+ +VFD++ VV LI+ + D+ R R + + ++ + + G+
Sbjct: 11 ARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGA 70
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
G LA++ + +VYVGS+L+ +Y++C + A VF+ + +N VSW A+
Sbjct: 71 CGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNAL 130
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
IA FA++ + L + M+ + FT++S+ SA GAL QGR H I+ G
Sbjct: 131 IAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQ 190
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
V N+++ MY K G++ +A VF+ M +D+V+WN+M+ AQ+GL A+ FEE
Sbjct: 191 KLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEE 250
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
+ K ++ + ITFL V+++C HGGLV+EGK YFD M + ++PE+DHY VDLLGRAGL
Sbjct: 251 IRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGL 310
Query: 388 LEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANL 430
L+EA F+ +MP+ P A +W AA+ L+P+ V L N+
Sbjct: 311 LKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNI 370
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
YA W+ AARVRK+MK G+K P CSW++I N V+ F A+D ++ + +I + + +
Sbjct: 371 YASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEI 430
Query: 491 VDQMKTLGYVP 501
++K GYVP
Sbjct: 431 NMRIKKAGYVP 441
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 112/220 (50%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y KC + DA VF++MP R+VVSWT +IA +AQ + + L M + PN FT
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
FTS+L A G G H ++ + + V ++L+ MY +C ++ A+ VF+ +
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
K+ VSWN++IAG+A+ + F EM + T+ + S+ G +E+G+
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ K G K + ++ + ++G + +AR +M
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRM 220
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 240/431 (55%), Gaps = 34/431 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDL--HRE------RLKVDASF------LSTAVTSCGSTR 149
VFD++ + +V L+S + L RE RL+ ++ F L + + +CG
Sbjct: 174 VFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELG 233
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
++ G + + G N Y+GS+LI++YSKC ++ + ++F+ MP R+ ++W A I+
Sbjct: 234 DLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAIS 293
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
A+AQ D + L+ M+ + ++PN T T++LSAC GAL G+ G
Sbjct: 294 AYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQH 353
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
I VA +LI MY KCG++E A VFN+M K+ SWN+MI+ A HG A A+ LFE M
Sbjct: 354 DIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMS 413
Query: 330 KQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
+ +P+ ITF+ ++S+C H GLV+EG FD M+ GL P+++HYSC+VDLL RAG
Sbjct: 414 DEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAG 473
Query: 387 LLEEARDFIKQMPIYPNAVIWEAAES---------------RLLLE--PECAATHVQLAN 429
L EA D I++MP P+ V A S ++LLE P + ++ +
Sbjct: 474 HLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSK 533
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+Y + WD AAR+R LM++ G+ PGCSWIE+ N + F + D ++ ++D
Sbjct: 534 IYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDL 593
Query: 490 LVDQMKTLGYV 500
L +++K GY+
Sbjct: 594 LYEELKKEGYL 604
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 142/273 (52%), Gaps = 4/273 (1%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C + IR C + G + + +S++T+Y +C A KVF+E+ +++VS
Sbjct: 126 ACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVS 185
Query: 204 WTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
W ++++ +A+ +E++ R+ S EP++ + S+L AC G L GR
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+ G + ++LISMY KCG + + +F+ M +D ++WN+ I+ YAQ+G+A AI
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDL 381
LF M + V P+ +T V+S+C G ++ GK D A H GL+ ++ + ++D+
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGK-QMDEYATHRGLQHDIFVATALIDM 364
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ G LE A+ MP N W A S L
Sbjct: 365 YAKCGSLESAQRVFNDMP-RKNDASWNAMISAL 396
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 197 PVRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
P N ++ ++ A W + L LY M+ + PN+FTF + AC +
Sbjct: 77 PHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMA 136
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R AHC+ ++G + NS+++MY +CG A VF+ + KD+VSWNS+++GYA+
Sbjct: 137 RLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKL 196
Query: 316 GLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
G A A+++F + ++ +PD ++ + V+ +C G +E G+ + + G+K
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYI 256
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
S ++ + + G L +R MP + + W AA S
Sbjct: 257 GSALISMYSKCGELVSSRRIFDGMP-SRDFITWNAAIS 293
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 234/422 (55%), Gaps = 19/422 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + M ++ LK D+ LS+ + ++ G IR G ++VY+GSSL
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+K I D+ +VF + R+ +SW +++A + Q + + L L+R M + ++P
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F+S++ AC L G+ H +R GF S I +A++L+ MY KCGN++ A +F+
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M+ D VSW ++I G+A HG A+ LFEEM +Q VKP+ + F+ V+++C H GLV+E
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
YF+SM K +GL EL+HY+ V DLLGRAG LEEA +FI +M + P +W
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
+ AE ++ E +V + N+YA W + A++R M+ KGL+ P C
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD-DASHKRTE 517
SWIE+ N + F + D+S+ + +I L +++QM+ GYV + D D HKR
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKREL 643
Query: 518 PF 519
F
Sbjct: 644 LF 645
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 191/421 (45%), Gaps = 57/421 (13%)
Query: 39 ISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDS-KHLDSQKFNHDFTGTNS 97
+SSSK+L K L I TR +K++ +L F++T S H + +T
Sbjct: 1 MSSSKALIKTL-----IKNPTRIKSKSQAK-QLHAQFIRTQSLSHTSASIVISIYTNLKL 54
Query: 98 TFGSSNVFDQLLDTPVVDVEKLISMHHD--LHRERLKV-----------DASFLSTAVTS 144
+ +F L PV+ + +I D L + L D + + + S
Sbjct: 55 LHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKS 114
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI------------------ 186
C ++R G +R G ++Y G++L+ +Y+K +
Sbjct: 115 CTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTS 174
Query: 187 -----------------IDAYK-VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
ID+ + VFE MP ++VVS+ IIA +AQ + L + R M
Sbjct: 175 NSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ L+P+ FT +S+L + + +G+ H IR G S + + +SL+ MY K +E
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
++ VF+ ++ +D +SWNS++AGY Q+G A+ LF +M+ +VKP A+ F VI +C
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACA 354
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
H + GK + + G + S +VD+ + G ++ AR +M + + V W
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWT 413
Query: 409 A 409
A
Sbjct: 414 A 414
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 243/407 (59%), Gaps = 27/407 (6%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQ--CLAIRTGFIANVYVGS 174
++ +++ + RE ++ + ST +T+ + +P Q L ++T + + VG+
Sbjct: 378 DRAMNLFCQMRREGVRPNHFTYSTILTANAAV------SPSQIHALVVKTNYENSPSVGT 431
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L YSK +A K+FE + +++V+W+A+++ +AQ ++ ++++ + +EP
Sbjct: 432 ALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEP 491
Query: 235 NDFTFTSILSACTG-SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
N+FTF+S+L+AC + ++ QG+ H +I+ GF + + V+++L++MY K GN+E A V
Sbjct: 492 NEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEV 551
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F +D+VSWNSMI+GYAQHG +++ +FEEM + ++ D ITF+GVIS+C H GLV
Sbjct: 552 FKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLV 611
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
EG+ YFD M K + + P ++HYSC+VDL RAG+LE+A D I +MP A IW
Sbjct: 612 NEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLA 671
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
AAE + L+P+ +A +V L+N+YA W + A+VRKLM K +K
Sbjct: 672 ACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKE 731
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
G SWIE+ N + F A D S+ + I L+ L ++K GY P+
Sbjct: 732 AGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPD 778
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 146/284 (51%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L R D S LS + CG + G C I+ GF+ +V VG+SL+ +Y K
Sbjct: 83 LRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTES 142
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ D +VF+EM V+NVVSWT+++A + Q + L+L+ M+ ++PN FTF ++L
Sbjct: 143 VEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGG 202
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
GA+ +G H I+ G S I V NS+++MY K V +A VF++M ++ VSW
Sbjct: 203 LAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSW 262
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
NSMIAG+ +GL + A +LF M + VK F VI C + + K + K
Sbjct: 263 NSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK 322
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+G +L+ + ++ + +++A M N V W A
Sbjct: 323 NGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTA 366
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 150/289 (51%), Gaps = 7/289 (2%)
Query: 111 TPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV 170
T +D+E + + + E +K+ + +T + C + + + C I+ G ++
Sbjct: 271 TNGLDLEAF-ELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDL 329
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEM-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
+ ++L+ YSKC I DA+K+F M V+NVVSWTAII+ + Q + D + L+ MR
Sbjct: 330 NIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR 389
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
+ PN FT+++IL+A A H ++ + + V +L Y K G+ E
Sbjct: 390 EGVRPNHFTYSTILTA----NAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANE 445
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A +F + KDIV+W++M++GYAQ G A+ +F ++ K+ V+P+ TF V+++C
Sbjct: 446 AAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAA 505
Query: 350 -GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
VE+GK + K G L S +V + + G +E A + K+
Sbjct: 506 PTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKR 554
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 154/382 (40%), Positives = 221/382 (57%), Gaps = 20/382 (5%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR-- 199
+ +C I G ++ GF A+ + ++LI +Y + + A +VF+ MP R
Sbjct: 101 IRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDR 160
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
N VSW A+IAA+ Q ++ L+ MR + + F S+LSACTG GAL QG+ H
Sbjct: 161 NSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIH 220
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+ G ++A ++I MYCKCG +E+A VFN + K I SWN MI G A HG
Sbjct: 221 GYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGE 280
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCV 378
AI+LF+EM ++ V PD ITF+ V+S+C H GLVEEGK YF M + GLKP ++H+ C+
Sbjct: 281 AAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCM 340
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECA 421
VDLLGRAGLLEEAR I +MP+ P+A + A + + LEP +
Sbjct: 341 VDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNS 400
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
+V LANLYA W+ A+VRKLM D+G+K PG S IE + V F A +++ +
Sbjct: 401 GRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAK 460
Query: 482 EILPVLDFLVDQMKTLGYVPEV 503
EI LD +++ ++++GYVP+
Sbjct: 461 EIYAKLDEILETIRSIGYVPDT 482
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 3/202 (1%)
Query: 201 VVSWTAIIAAFAQEWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
V+ + AI + WQ+ C+ +Y M + + PN FT+ ++ AC A+ +G+ H
Sbjct: 58 VIKFCAISKSGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIH 117
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD--IVSWNSMIAGYAQHGL 317
++ GF + N+LI MY ++E+A VF+NM +D VSWN+MIA Y Q
Sbjct: 118 AHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNR 177
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A LF+ M + V D ++S+C G +E+GK + K G++ + +
Sbjct: 178 LHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATT 237
Query: 378 VVDLLGRAGLLEEARDFIKQMP 399
V+D+ + G LE+A + ++P
Sbjct: 238 VIDMYCKCGCLEKASEVFNELP 259
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 231/445 (51%), Gaps = 60/445 (13%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC-- 183
+H E DA+ +S A+++ G + + G ++ G + V ++LI +Y KC
Sbjct: 144 MHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGR 203
Query: 184 -----RV------------------------IIDAYKVFEEMPVR----NVVSWTAIIAA 210
RV + +A +F E R NVVSWT+I+A
Sbjct: 204 ADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVAC 263
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
Q + ++L+R M++ +EPN T +L A AL GRSAHC ++R GF
Sbjct: 264 CVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHD 323
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ V ++L+ MY KCG A +F+ M +++VSWN+MI GYA HG A A+ LF M K
Sbjct: 324 VYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQK 383
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
+ KPD +TF V+ +C GL EEG+ YF+ M + HG+ P ++HY+C+V LLGR+G L+
Sbjct: 384 CKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLD 443
Query: 390 EARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYA 432
EA D I +MP P++ IW AAE LEP A +V L+N+YA
Sbjct: 444 EAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYA 503
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
+ WD RVR MK+ GLK GCSWIEI N V+ A D S+ ++ I L+ L
Sbjct: 504 SKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTI 563
Query: 493 QMKTLGYVP-------EVHEEKVDD 510
+M LG+ P +V E++ D+
Sbjct: 564 EMNRLGFAPSRDFVLHDVEEQEKDN 588
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 38/307 (12%)
Query: 121 SMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
S++H L D L +A+ SC + R A+ +G + +V SSL+ Y
Sbjct: 6 SLYHFLRHVSFPPDPHLLPSALKSCPAQPLARA---LHAAAVVSGLAEDPFVASSLLHSY 62
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
+ A VF+ MP +NVV W+A+IA ++ + L MR++ +EPN T+
Sbjct: 63 IRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWN 122
Query: 241 SILSACTGSG-----------------------------ALGQ------GRSAHCQTIRM 265
++S SG A+G G+ H ++
Sbjct: 123 GLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKA 182
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G V +LI MY KCG +E V VF+ D+ S N+++AG +++ A+ LF
Sbjct: 183 GCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLF 242
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
E + + V+ + +++ +++ C G E F +M G++P CV+
Sbjct: 243 REFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANV 302
Query: 386 GLLEEAR 392
L R
Sbjct: 303 AALMHGR 309
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 228/399 (57%), Gaps = 20/399 (5%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R K + +T +TSC + G L ++ + ++++VGSSL+ +Y+K
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 202
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
I +A ++FE +P R+VVS TAIIA +AQ + LE++ + + + PN T+ S+L+
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLT 262
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
A +G L G+ AHC +R Y + NSLI MY KCGN+ A +F+NM + +S
Sbjct: 263 ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 322
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
WN+M+ GY++HGL ++LF M ++RVKPDA+T L V+S C HG + + G FD M
Sbjct: 323 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGM 382
Query: 364 --AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV---------------- 405
++G KP +HY C+VD+LGRAG ++EA +FIK+MP P A
Sbjct: 383 VAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVD 442
Query: 406 IWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIM 464
I E+ RL+ +EPE A +V L+NLYA W VR +M K + PG SWI+
Sbjct: 443 IGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHE 502
Query: 465 NVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
++ F A D+++ R E+L + + +MK GYVP++
Sbjct: 503 QTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDL 541
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 148/272 (54%), Gaps = 9/272 (3%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C R +R G I+T ++ Y+ + L+ Y KC + DA KV +EMP +NV
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWTA+I+ ++Q L ++ M S +PN+FTF ++L++C + LG G+ H
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ + S+I V +SL+ MY K G ++EA +F + +D+VS ++IAGYAQ GL A
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC---- 377
+++F + + + P+ +T+ ++++ L++ GK H L+ EL Y+
Sbjct: 239 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK----QAHCHVLRRELPFYAVLQNS 294
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ + G L AR MP A+ W A
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMP-ERTAISWNA 325
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Query: 226 MMRNSMLEP--NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
++ +ML P + ++L+AC AL G+ H I+ + + L+ Y K
Sbjct: 40 LLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK 99
Query: 284 CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
C +E+A V + M K++VSW +MI+ Y+Q G + A+ +F EMM+ KP+ TF V
Sbjct: 100 CDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++SC + GK + K + S ++D+ +AG ++EAR+ + +P
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + M H LH E + + ++ +T+ + G C +R + +SL
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM-LEPN 235
I +YSKC + A ++F+ MP R +SW A++ +++ LEL+R+MR+ ++P+
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 236 DFTFTSILSACT 247
T ++LS C+
Sbjct: 356 AVTLLAVLSGCS 367
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 231/406 (56%), Gaps = 28/406 (6%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
FL A++ + N+R G + IR GF + V+V +SL+ +Y+ C AYKVFE M
Sbjct: 123 FLLKAISK---SLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELM 179
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
R++V+W ++I FA + + L L+R M +EP+ FT S+LSA GAL GR
Sbjct: 180 KERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGR 239
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H +++G V NSL+ +Y KCG + EA VF+ M ++ VSW S+I G A +G
Sbjct: 240 RVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNG 299
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHY 375
A++LF+EM Q + P ITF+GV+ +C H G+++EG YF M + G+ P ++HY
Sbjct: 300 FGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHY 359
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEP 418
C+VDLL RAGL+++A ++I+ MP+ PNAVIW E A S LL LEP
Sbjct: 360 GCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEP 419
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
+ + +V L+NLYA R W +R+ M G+K PG S +E+ N VY F D+S+
Sbjct: 420 KHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHP 479
Query: 479 RLSEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRTE 517
+ ++ +L+ + + +K GYVP ++ EE+ + A +E
Sbjct: 480 QSQDVYALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSE 525
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 128/252 (50%), Gaps = 3/252 (1%)
Query: 158 QCLAIRTGF-IANVYVGSSLI-TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW 215
+IR G + N +G LI T+ S + AY VF + NV +W II +A+
Sbjct: 38 HAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESD 97
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
YR M S +EP+ T+ +L A + S + +G + H TIR GF S + V N
Sbjct: 98 NPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQN 157
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
SL+ +Y CG+ E A VF M +D+V+WNSMI G+A +G A+ LF EM + V+P
Sbjct: 158 SLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEP 217
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
D T + ++S+ G +E G+ + K GL + ++DL + G + EA+
Sbjct: 218 DGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVF 277
Query: 396 KQMPIYPNAVIW 407
+M NAV W
Sbjct: 278 SEMS-ERNAVSW 288
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 225/396 (56%), Gaps = 37/396 (9%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G + + I+ ++V++ +SLI Y+KC + Y+VF P R+VVSW ++I AF Q
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQ 214
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ LEL++ M ++PN T +LSAC GR H R + +
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTL 274
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ------------HGLAVRA 321
+N+++ MY KCG+VE+A +F+ M KDIVSW +M+ GYA+ HG A
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDA 334
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVD 380
I LF +M + +VKP+A+TF ++ +C H GLVEEG+ +F+ M +G+ P + HY+C+VD
Sbjct: 335 IALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVD 394
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAAT 423
+LGRAGLLEEA + I++MP+ P A +W E A S+L+ LEP
Sbjct: 395 ILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGA 454
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
+V L+N+YA WD+ + +RKLM+D GLK PGCS IE+ +V+ F D S+ +I
Sbjct: 455 YVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKI 514
Query: 484 LPVLDFLVDQMKTLGYVPE-------VHEEKVDDAS 512
LD +V +++T+GYVP V EE V + +
Sbjct: 515 YAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQA 550
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 6/261 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMPVR 199
+ C T+ ++ +RTG + + S LIT S + A +VF+++P
Sbjct: 42 IDQCSETKQLK---QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
N+ +W +I A+A L ++ RM+ S P+ FTF ++ A + L G++
Sbjct: 99 NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H I++ S + + NSLI Y KCG + VF N +D+VSWNSMI + Q G
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCP 218
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A++LF+EM Q VKP+ IT +GV+S+C E G+ + ++ + L + +
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAM 278
Query: 379 VDLLGRAGLLEEARDFIKQMP 399
+D+ + G +E+A+ +MP
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMP 299
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 101/213 (47%), Gaps = 14/213 (6%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + ++ + +K + + +++C + G R ++ + +++
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAM 278
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM------------CLELY 224
+ +Y+KC + DA ++F++MP +++VSWT ++ +A+ + D + L+
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALF 338
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT-IRMGFFSYIQVANSLISMYCK 283
M+ ++PN TFT+IL AC+ G + +GR+ Q + G ++ ++ + +
Sbjct: 339 SKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGR 398
Query: 284 CGNVEEAVYVFNNMHGKDIVS-WNSMIAGYAQH 315
G +EEAV + M S W +++ H
Sbjct: 399 AGLLEEAVELIEKMPMAPAASVWGALLGACTIH 431
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 174/499 (34%), Positives = 266/499 (53%), Gaps = 30/499 (6%)
Query: 27 IYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQ 86
+YR+ C+ L ++ S+SL K L++ I + H LI + +T + Q
Sbjct: 19 LYRNLCNTLL-SLTFSRSLPKGLQLHAHIIKLGLQTIPLLSH-HLINFYSKTHLPYSSLQ 76
Query: 87 KFNHDFTGTNSTFGSSNV--FDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTS 144
F HD ++T SS + F Q D P++ + M R+ + D +A S
Sbjct: 77 IF-HDSPHKSATTWSSVISSFAQN-DLPLLSLNYFRLML----RQGVPPDDHIFPSATKS 130
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
CG ++ C A++T + +++VGSS+I +Y+KC I A+ VF+EMP RNVVSW
Sbjct: 131 CGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSW 190
Query: 205 TAIIAAFAQEWQVDMCLELYR--MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
+ +I + Q + D L L++ ++ NDFT +S+L C GS L GR H +
Sbjct: 191 SGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLS 250
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+ F S VA+SLIS+Y KCG VEEA VF + +++ WN+M+ AQH +
Sbjct: 251 FKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTF 310
Query: 323 DLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+LF++M +K + ITFL V+ +C H GLVE+GK YF+ M +G++P HYS +VDL
Sbjct: 311 ELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDL 370
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATH 424
LGRAG L +A I++MP+ P +W A A+ L + H
Sbjct: 371 LGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLH 430
Query: 425 VQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEIL 484
V L+N YA W++AA+ RK+M+D+G+K G SW+E N ++ F A D+S+ + EI
Sbjct: 431 VMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIY 490
Query: 485 PVLDFLVDQMKTLGYVPEV 503
LD L ++M GYV +
Sbjct: 491 DKLDELGEEMDKAGYVADT 509
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 142/299 (47%), Gaps = 6/299 (2%)
Query: 113 VVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
+VD + + + H +++ L + L + S +R++ G I+ G +
Sbjct: 1 MVDPQHQLQLPHSFNQQPLYRN---LCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLL 57
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
LI YSK + + ++F + P ++ +W+++I++FAQ + L +R+M +
Sbjct: 58 SHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGV 117
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
P+D F S +C +L + HC ++ + I V +S+I MY KCG++ A
Sbjct: 118 PPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHN 177
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM--KQRVKPDAITFLGVISSCRHG 350
VF+ M +++VSW+ +I GY Q G ++ LF+ + ++ + T V+ C
Sbjct: 178 VFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGS 237
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L++ G++ K S ++ L + G++EEA D +++ + N +W A
Sbjct: 238 TLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTV-RNLGMWNA 295
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 245/479 (51%), Gaps = 66/479 (13%)
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH---------HDLHRER----LKVDAS 136
H + G+ VFD L+ VV L S + D+ RE +K +
Sbjct: 121 HAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPM 180
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+S+ + +C ++++ G A+R G + N++V S+L++LY+KC + +A VF+ M
Sbjct: 181 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLM 240
Query: 197 PVRNVVSWTAIIAAFAQE------------------------WQV-----------DMCL 221
P R+VVSW ++ A+ + W + +
Sbjct: 241 PHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 300
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
E++R M+ +PN+ T +SIL AC+ S L G+ HC R + +L+ MY
Sbjct: 301 EMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMY 360
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++ + VF+ M KD+V+WN+MI A HG A+ LF++M+ RV+P+++TF
Sbjct: 361 AKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFT 420
Query: 342 GVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
GV+S C H LVEEG F+SM + H ++P+ +HYSCVVD+ RAG L EA FI+ MP+
Sbjct: 421 GVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPM 480
Query: 401 YPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
P A W A A+ +EP +V L N+ + W +A++V
Sbjct: 481 EPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQV 540
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
R LMK++G+ PGCSW+++ N V+ F DKSN +I LD LV++MK GY P+
Sbjct: 541 RILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPD 599
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 130/251 (51%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I ++ L +K D A +C + + A R G +++V+VG++LI
Sbjct: 63 IKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHA 122
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC+ + A +VF+++ VR+VVSWT++ + + + ++++R M S ++PN T
Sbjct: 123 YGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTV 182
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+SIL AC L G+ H +R G + V ++L+S+Y KC +V EA VF+ M
Sbjct: 183 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 242
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+VSWN ++ Y ++ + LF +M + V+ D T+ VI C G EE
Sbjct: 243 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 302
Query: 360 FDSMAKHGLKP 370
F M K G KP
Sbjct: 303 FRKMQKMGFKP 313
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A ++F+ +P + + + +I+A + +++Y ++ ++P+ F + AC
Sbjct: 31 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 90
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
SG + + H R G S + V N+LI Y KC VE A VF+++ +D+VSW S+
Sbjct: 91 SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSL 150
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ Y + G + +D+F EM VKP+ +T ++ +C ++ GK +HG+
Sbjct: 151 SSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGM 210
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L S +V L + + EAR MP + + V W
Sbjct: 211 VVNLFVCSALVSLYAKCLSVREARMVFDLMP-HRDVVSWNG 250
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI + G+ A +F+N+ D + +++I+ HGL+ AI ++ + ++ +KPD
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
FL +C G K D + G+ ++ + ++ G+ +E AR
Sbjct: 78 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137
Query: 397 QMPIYPNAVIWEAAES 412
+ + + V W + S
Sbjct: 138 DL-VVRDVVSWTSLSS 152
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 219/380 (57%), Gaps = 19/380 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
K + H + +E++++D L + +C T ++ G+ L + GF N Y+GSSL
Sbjct: 178 NKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSL 237
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+++Y+KC ++ +A +VF MP RNVV WT++IA Q + ++L+R M+ + ++ +D
Sbjct: 238 VSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADD 297
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T +++S+C GAL GR H G + V NSLI MY KCG+V +A +F+
Sbjct: 298 ATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHG 357
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEE 355
+ +D+ +W MI G+A +GL V A+DLF +M + +V P+ + FLGV+++C HGGLVE+
Sbjct: 358 LTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQ 417
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
G +F M+K + L P ++HY C+VDLLGRA LL EA FIK MP+ P+ V+W
Sbjct: 418 GYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFAC 477
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AAE LEP+ HV L+N+YA W VR M + PG
Sbjct: 478 RASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSKKPG 537
Query: 458 CSWIEIMNVVYRFRAEDKSN 477
CS+IE+ ++ F A D+S+
Sbjct: 538 CSFIEVDGCIHEFFAGDESH 557
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 134/263 (50%), Gaps = 2/263 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+ +D L+ A+++ ++ G+ + L+++ ++ +V ++LI +YS C A
Sbjct: 89 MTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASAR 148
Query: 191 KVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
V + P +VVSW IIA + + + L+ + M + ++ T ++L AC
Sbjct: 149 LVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACAR 208
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+GA+ G H + GF + +SL+SMY KCG VEEA VFN M +++V W SM
Sbjct: 209 TGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSM 268
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
IAG Q G A+DLF +M VK D T V+SSC G ++ G+ HGL
Sbjct: 269 IAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGL 328
Query: 369 KPELDHYSCVVDLLGRAGLLEEA 391
EL + ++D+ + G + +A
Sbjct: 329 GKELSVKNSLIDMYSKCGDVNKA 351
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++++ +SA +L G H ++++ S V N+LI+MY C A V
Sbjct: 92 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 151
Query: 295 NNMH--GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
++ D+VSWN++IAGY + G+ +A+ F +M K++V+ D +T L V+ +C G
Sbjct: 152 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGA 211
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ G + + +G + S +V + + G++EEAR +MP N V W +
Sbjct: 212 MKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMP-ERNVVCWTS 267
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 211/365 (57%), Gaps = 26/365 (7%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVF------EEMP-VR-NVVSWTAIIAAFAQEWQVDMC 220
N+ ++LI+ Y+ +A+ +F +E P VR NVVSW+A+I FA + Q +
Sbjct: 1174 NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEA 1233
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
LEL+R M+ + ++ N T S+LS C AL GR H +R I V N LI+M
Sbjct: 1234 LELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINM 1293
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G+ +E VF + KD++SWN+M+AGY HGL AI F++M+K +PD +TF
Sbjct: 1294 YTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTF 1353
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ V+S+C H GLV EG+ FD M K ++P+++HY+C+VDLLGRAGLL+EA +K MP
Sbjct: 1354 VAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMP 1413
Query: 400 IYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
+ PNA +W E A L E A +++ L+N+YA W+ +A+
Sbjct: 1414 VEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAK 1473
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VR K KGLK PG SWI++ VY F A + + L E+ +L L QM+ GY+P+
Sbjct: 1474 VRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPD 1533
Query: 503 VHEEK 507
+ EE+
Sbjct: 1534 IDEEQ 1538
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 116/241 (48%), Gaps = 39/241 (16%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ GF N++VG+ L+ +Y K + DA KVFE M VR+ VSW +++ +A +
Sbjct: 1000 VEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGAS 1059
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSG------------------------------- 250
E++RMM ++ LEPN T+TS+LS+ G
Sbjct: 1060 EMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVS 1119
Query: 251 ----ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
A +G+ H ++ GF +Y+ V NSLI +Y K GNV A +F + K+IVSWN
Sbjct: 1120 VDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWN 1179
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQ----RVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
++I+ YA G A +F ++ K V+P+ +++ VI G EE F
Sbjct: 1180 ALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRR 1239
Query: 363 M 363
M
Sbjct: 1240 M 1240
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR---NVVSWTAIIAAFAQEWQVD 218
I TG + ++ + ++++Y+ ++ DA +VFE P+ N++ W +I+ A +
Sbjct: 896 IVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCE 955
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
LE+Y MR + + FTF ++ AC G+ RS H + MGF + V N L+
Sbjct: 956 EALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELM 1015
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY K G +++A VF M + VSWN+M++GYA + A ++F M ++P+ +
Sbjct: 1016 GMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLV 1075
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
T+ ++SS G E F M G+ + + V+ +
Sbjct: 1076 TWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSV 1118
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + ++K ++ +++ ++ C + G +R+ N+ VG+ L
Sbjct: 1231 EEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGL 1290
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+K + VFE++ ++++SW ++A + + + + M EP+
Sbjct: 1291 INMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDG 1350
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN--SLISMYCKCGNVEEAVYVF 294
TF ++LSAC+ +G + +GR + I+ F Q+ + ++ + + G ++EA V
Sbjct: 1351 VTFVAVLSACSHAGLVAEGRELFDKMIKE-FRVEPQMEHYACMVDLLGRAGLLQEASKVV 1409
Query: 295 NNM 297
+M
Sbjct: 1410 KSM 1412
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 216/355 (60%), Gaps = 20/355 (5%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW-QVDMCLELYR 225
+ ++ VG++L+ YSKC + A +VF++M RNV +WT +I AQ D +
Sbjct: 656 LVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQ 715
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+R ++ P+ T+ SILSAC +GAL + H + G S ++V N+L+ MY KCG
Sbjct: 716 MLREGIV-PDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCG 774
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++++A VF++M +D+ SW MI G AQHG + A+D F +M + KP+ +++ V++
Sbjct: 775 SIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLT 834
Query: 346 SCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C H GLV+EG+ F SM + +G++P ++HY+C+VDLLGRAGLLEEA FI MPI P+
Sbjct: 835 ACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDD 894
Query: 405 VIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
W AA+ RL L+P+ A+T+V L+N+YA W+Q VR +M
Sbjct: 895 APWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMM 954
Query: 448 KDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ KG++ PG SWIE+ N ++ F D S+ EI L+ L++++K GYVP+
Sbjct: 955 QRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPD 1009
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 141/273 (51%), Gaps = 1/273 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ +E L D++ + + + GST + A+ TG I++ VGS+ I +Y +C
Sbjct: 515 MQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGS 574
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I DA +F+++ VR+V +W A+I AQ+ L L+ M+ P+ TF +ILSA
Sbjct: 575 IDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSA 634
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
AL + H G ++V N+L+ Y KCGNV+ A VF++M +++ +W
Sbjct: 635 NVDEEALEWVKEVHSHATDAGLVD-LRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTW 693
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
MI G AQHG A F +M+++ + PDA T++ ++S+C G +E K +
Sbjct: 694 TMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVS 753
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
GL +L + +V + + G +++AR M
Sbjct: 754 AGLVSDLRVGNALVHMYAKCGSIDDARSVFDDM 786
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 136/261 (52%), Gaps = 3/261 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+ ++LS + +C N++ G I++GF ++V V ++L+ +Y KC I DA +F
Sbjct: 219 EITYLSI-LKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIF 277
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
++M RNV+SWT +I A + L+ M+ PN +T+ SIL+A +GAL
Sbjct: 278 DKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
+ H + G ++V N+L+ MY K G++++A VF+ M +DI SW MI G A
Sbjct: 338 WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLA 397
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVI--SSCRHGGLVEEGKVYFDSMAKHGLKPE 371
QHG A LF +M + P+ T+L ++ S+ +E KV + G +
Sbjct: 398 QHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISD 457
Query: 372 LDHYSCVVDLLGRAGLLEEAR 392
L + ++ + + G +++AR
Sbjct: 458 LRIGNALIHMYAKCGSIDDAR 478
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 129/231 (55%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I++G N+YV + L+ +Y +C + A +VF+++ +N+ WT +I +A+ + +
Sbjct: 145 IKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAM 204
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+Y MR +PN+ T+ SIL AC L G+ H I+ GF S ++V +L++MY
Sbjct: 205 RVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMY 264
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++E+A +F+ M ++++SW MI G A +G A LF +M ++ P++ T++
Sbjct: 265 VKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYV 324
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
++++ G +E K GL +L + +V + ++G +++AR
Sbjct: 325 SILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDAR 375
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 141/263 (53%), Gaps = 14/263 (5%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
A+ G ++ VG++L+ +Y+K I DA VF+ M R++ SWT +I AQ +
Sbjct: 346 AVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEA 405
Query: 221 LELYRMMRNSMLEPNDFTFTSIL--SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L+ M+ + PN T+ SIL SA + AL + H GF S +++ N+LI
Sbjct: 406 FSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALI 465
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY KCG++++A VF+ M +D++SWN+M+ G AQ+G A +F +M ++ + PD+
Sbjct: 466 HMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDST 525
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKH----GLKPELDHYSCVVDLLGRAGLLEEARDF 394
T+L ++++ HG + + + + KH GL + S + + R G +++AR
Sbjct: 526 TYLSLLNT--HGS--TDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLL 581
Query: 395 IKQMPIYP----NAVIWEAAESR 413
++ + NA+I AA+ R
Sbjct: 582 FDKLSVRHVTTWNAMIGGAAQQR 604
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 104/186 (55%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
A GFI+++ +G++LI +Y+KC I DA VF+ M R+V+SW A++ AQ
Sbjct: 449 AEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEA 508
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++ M+ L P+ T+ S+L+ + AL H + G S +V ++ I M
Sbjct: 509 FTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHM 568
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y +CG++++A +F+ + + + +WN+MI G AQ A+ LF +M ++ PDA TF
Sbjct: 569 YIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTF 628
Query: 341 LGVISS 346
+ ++S+
Sbjct: 629 INILSA 634
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 135/275 (49%), Gaps = 22/275 (8%)
Query: 78 TDSKHLDSQKFN---HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLI---SMH---HD--- 125
TD+ +D + N H ++ + + VFD +++ V +I + H HD
Sbjct: 652 TDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFS 711
Query: 126 ----LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
+ RE + DA+ + +++C ST + A+ G ++++ VG++L+ +Y+
Sbjct: 712 HFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYA 771
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
KC I DA VF++M R+V SWT +I AQ + L+ + M++ +PN +++ +
Sbjct: 772 KCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVA 831
Query: 242 ILSACTGSGALGQGRSAHCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEA-VYVFNNMHG 299
+L+AC+ +G + +GR T G ++ ++ + + G +EEA +++ N
Sbjct: 832 VLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIE 891
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
D W +++ +G +++ E K+R+K
Sbjct: 892 PDDAPWGALLGACVTYG----NLEMAEFAAKERLK 922
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ F++ +IL C + + H I+ G + VAN L+ +Y +CG ++ A VF
Sbjct: 117 DSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVF 176
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ + K+I W +MI GYA++G A A+ ++++M ++ +P+ IT+L ++ +C ++
Sbjct: 177 DKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLK 236
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
GK + + G + ++ + +V++ + G +E+A+ +M + N + W
Sbjct: 237 WGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM-VERNVISW 288
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/435 (36%), Positives = 240/435 (55%), Gaps = 33/435 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHD-------LH------RERLKVDASFLSTAVTSCGS 147
+ +VFD++ + VV +IS + LH R + + +T ++SC
Sbjct: 64 ARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTG 123
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
G + + +++VGSSL+ +Y+K I +A VFE +P R+VVS TAI
Sbjct: 124 FSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAI 183
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ +AQ + LEL+ ++ + N T+ S+L+A +G AL G+ H +R
Sbjct: 184 ISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCEL 243
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
Y+ + NSLI MY KCGN+ A +FNNM + ++SWN+M+ GY++HG + + LF+
Sbjct: 244 PFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKL 303
Query: 328 MMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG--LKPELDHYSCVVDLLGR 384
M ++ +VKPD++TFL V+S C HGGL ++G FD M G ++ ++HY CV+DLLGR
Sbjct: 304 MREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGR 363
Query: 385 AGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQL 427
AG +EEA + IK+MP P A IW E RLL +EPE A +V L
Sbjct: 364 AGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVIL 423
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+NLYA W+ VR+LM +K + PG SWIE+ ++ F A D+S+ R E+ +
Sbjct: 424 SNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKV 483
Query: 488 DFLVDQMKTLGYVPE 502
L+ + K GYVP+
Sbjct: 484 RELLVKFKESGYVPD 498
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 146/272 (53%), Gaps = 9/272 (3%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ C + R +R G I+T ++ VY+ + LI LY+KC + A VF+EM RNV
Sbjct: 17 LNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNV 76
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWTA+I+ ++Q L L+ M S EPN+FTF ++LS+CTG GR H
Sbjct: 77 VSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSH 136
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
+ + ++I V +SL+ MY K G + EA VF + +D+VS ++I+GYAQ GL A
Sbjct: 137 IFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEA 196
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY----SC 377
++LF + ++ + + +T+ ++++ ++ GK + H L+ EL Y +
Sbjct: 197 LELFCRLQREGMSSNYVTYASLLTALSGLAALDHGK----QVHSHVLRCELPFYVVLQNS 252
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ + G L AR MP+ + W A
Sbjct: 253 LIDMYSKCGNLNYARKIFNNMPV-RTVISWNA 283
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ +L+ C A+ +G+ H I+ + + ++ LI +Y KC + A +VF+ M
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++VSW +MI+GY+Q G A A+ LF +M++ +P+ TF V+SSC E G+
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ K + + S ++D+ +AG + EAR + +P
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 228/374 (60%), Gaps = 22/374 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++T + + VG++L+ Y K + +A KVF + +++V+W+A++A +AQ + + +
Sbjct: 424 VKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAI 483
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGA-LGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+++ + ++PN+FTF+SIL+ C + A +GQG+ H I+ S + V+++L++M
Sbjct: 484 KIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 543
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G++E A VF KD+VSWNSMI+GYAQHG A++A+D+F+EM K++VK D++TF
Sbjct: 544 YAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTF 603
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+GV ++C H GLVEEG+ YFD M + + P +H SC+VDL RAG LE+A I MP
Sbjct: 604 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMP 663
Query: 400 IYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
+ IW AAE + + PE +A +V L+N+YA W + A+
Sbjct: 664 NLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAK 723
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VRKLM ++ +K PG SWIE+ N Y F A D+S+ +I L+ L ++K LGY P+
Sbjct: 724 VRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 783
Query: 503 VHE--EKVDDASHK 514
+ +DD HK
Sbjct: 784 TSYVLQDIDD-EHK 796
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 143/285 (50%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+++D S S+ + + + G C I+ GF+ +V VG+SL+ Y K D
Sbjct: 93 MEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGR 152
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VF+EM RNVV+WT +I+ +A+ + L L+ M++ +PN FTF + L G
Sbjct: 153 NVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEG 212
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G+G H ++ G I V+NSLI++Y KCGNV +A +F+ K +V+WNSMI+
Sbjct: 213 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 272
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GYA +GL + A+ +F M V+ +F +I C + + + S+ K+G
Sbjct: 273 GYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVF 332
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL 415
+ + + ++ + + +A K+ N V W A S L
Sbjct: 333 DQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFL 377
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 150/286 (52%), Gaps = 7/286 (2%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
+D+E L M + + +++ S ++ + C + + +R C ++ GF+ + +
Sbjct: 279 LDLEAL-GMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIR 337
Query: 174 SSLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
++L+ YSKC ++DA ++F+E + NVVSWTA+I+ F Q + + L+ M+ +
Sbjct: 338 TALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGV 397
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN+FT++ IL+A + H Q ++ + V +L+ Y K G V+EA
Sbjct: 398 RPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAK 453
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH-GG 351
VF+ + KDIV+W++M+AGYAQ G AI +F E+ K VKP+ TF +++ C
Sbjct: 454 VFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTA 513
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
+ +GK + K L L S ++ + + G +E A + K+
Sbjct: 514 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKR 559
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A+ +F++ P R+ S+T+++ F+++ + L+ +++ +E + F+S+L
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
GR HCQ I+ GF + V SL+ Y K N ++ VF+ M +++V+W ++
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I+GYA++ L + LF M + +P++ TF + G+ G + K+GL
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 229
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + +++L + G + +AR + + + V W +
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEV-KSVVTWNS 269
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 107/206 (51%), Gaps = 7/206 (3%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRG-GAPYQCLAIRTGFIANVYVG 173
+ E I + +L + +K + S+ + C +T G G + AI++ +++ V
Sbjct: 478 ETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVS 537
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
S+L+T+Y+K I A +VF+ +++VSW ++I+ +AQ Q L++++ M+ ++
Sbjct: 538 SALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 597
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS-LISMYCKCGNVEEAVY 292
+ TF + +ACT +G + +G +R + + NS ++ +Y + G +E+A+
Sbjct: 598 MDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 657
Query: 293 VFNNM---HGKDIVSWNSMIAGYAQH 315
V +NM G I W +++A H
Sbjct: 658 VIDNMPNLAGSTI--WRTILAACRVH 681
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 240/398 (60%), Gaps = 27/398 (6%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQ--CLAIRTGFIANVYVGSSLITLYSKC 183
+ RE +K + ST +T+ G +P++ AI+ ++ + VG++L+ Y K
Sbjct: 1 MSREGIKPNDFTYSTILTAQ------PGVSPFEMHAQAIKRNYVKSPSVGTALLDAYVKR 54
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ +A KVF+ + +++V+W+A+I +AQ + + ++ M ++PN++TF+ I+
Sbjct: 55 GNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGII 114
Query: 244 SACTG-SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
+AC + + QG+ H +I+ F + + V+++L++MY K G++E A VF +D+
Sbjct: 115 NACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDL 174
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
VSWNS+I+GYAQHG +A+++FEEM +Q ++ D +TF+GVIS+C H GL EG+ YFD
Sbjct: 175 VSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDI 234
Query: 363 MAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------------- 408
M K H ++P ++HYSC+VDL GRAG+L +A + I +MP +A +W
Sbjct: 235 MVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLE 294
Query: 409 ----AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIM 464
AA+ + L+P+ A++V L N+YA V W + A+VRKLM++K +K G SWIE+
Sbjct: 295 VGKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVK 354
Query: 465 NVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
N Y F A D S+ ++I L+ L Q+K GY P+
Sbjct: 355 NKTYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPD 392
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/440 (34%), Positives = 243/440 (55%), Gaps = 20/440 (4%)
Query: 82 HLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTA 141
H+D D + + F +++ + LD +D S+ + R + D
Sbjct: 163 HMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGST--SIVRSMVRNVGQWDHVSYVAV 220
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ C ST+ + G+ A++ NVYVGS+L+ +Y KC +A +VFE +P +N+
Sbjct: 221 LGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNI 280
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWTAI+ A+ Q + L+L+ M + PN+FT+ L++C G L G +
Sbjct: 281 VSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGAC 340
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
T++ G + + V N+L++MY K G+VE+A VF +M +D+VSWNS+I GYA HG A A
Sbjct: 341 TMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREA 400
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVD 380
++ F +M+ P +TF+GV+S+C GLV+EG Y + M K G+KP +HY+C+V
Sbjct: 401 MEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVG 460
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAAT 423
LL R G L+EA FI+ I + V W + AE L+P+ T
Sbjct: 461 LLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGT 520
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
+V L+N+YA WD +VR+LM++ G++ PG SWI++ + V+ F +EDK + + +I
Sbjct: 521 YVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQI 580
Query: 484 LPVLDFLVDQMKTLGYVPEV 503
L L+D++K +GYVP +
Sbjct: 581 TKKLQELIDKIKVIGYVPNI 600
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 129/262 (49%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+AV + R+ G AI+ G + YV S+++ +Y +C + +A KVF+ +
Sbjct: 116 LSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVS 175
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
NV ++ ++I F Q+D + R M ++ + + ++ ++L C + + G
Sbjct: 176 SFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQ 235
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H Q ++ + V ++L+ MY KC EA VF + K+IVSW +++ Y Q+ L
Sbjct: 236 VHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNEL 295
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ LF +M + V+P+ T+ ++SC ++ G K G L +
Sbjct: 296 FEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNA 355
Query: 378 VVDLLGRAGLLEEARDFIKQMP 399
++++ ++G +E+AR MP
Sbjct: 356 LMNMYSKSGSVEDARRVFLSMP 377
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 4/236 (1%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LI LY KC + A +VF+ MP RN VS +++ +A + L L R+ +
Sbjct: 54 NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALLRVADFGL-- 111
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
N++ +S ++A + GR H I+ G + V ++++ MYC+C +++EAV V
Sbjct: 112 -NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKV 170
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+N+ ++ ++NSMI G+ G + + M++ + D ++++ V+ C V
Sbjct: 171 FDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEV 230
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G K L+ + S +VD+ G+ EA + +P N V W A
Sbjct: 231 VLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLP-EKNIVSWTA 285
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 232/407 (57%), Gaps = 22/407 (5%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + I + + E ++ + LS+ + +C + N++ G IR A+++V S
Sbjct: 480 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 539
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SLI LY KC I A VF+ MP NVVSW +I+ + + L ++ MR + ++P
Sbjct: 540 SLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKP 599
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ TFTS+L AC+ L +G+ H I V +L+ MY KCG V+EA+++F
Sbjct: 600 DAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIF 659
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
N + +D VSW SMIA Y HG A A+ LFE+M + KPD +TFL ++S+C H GLV+
Sbjct: 660 NQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVD 719
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV-----IWE 408
EG YF+ M A++G KP ++HYSC++DLLGR G L EA + +++ P V ++
Sbjct: 720 EGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFS 779
Query: 409 AAE-----------SRLLLE--PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A RLL+E P+ +T++ L+N+YA V+ WD+ +VR +K+ GLK N
Sbjct: 780 ACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKN 839
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTR---LSEILPVLDFLVDQMKTLGY 499
PGCSWIE+ ++ F EDKS+ + + E + +L V++ + L +
Sbjct: 840 PGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVLSF 886
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 156/283 (55%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + + ++ K D+ L+T ++SC ++ G +R+GF + +V S+L
Sbjct: 381 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 440
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC + A +VFE++ +NVVSW ++IA ++ + C+EL+R M + P
Sbjct: 441 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 500
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T +SIL AC+ S L G+ H IR + I V +SLI +Y KCGN+ A VF N
Sbjct: 501 TTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQN 560
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M ++VSWN MI+GY + G + A+ +F +M K VKPDAITF V+ +C ++E+G
Sbjct: 561 MPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG 620
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K + + + L+ ++D+ + G ++EA Q+P
Sbjct: 621 KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 663
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 194/398 (48%), Gaps = 33/398 (8%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E L H LH LK DA + + +C + G I++GF +V V SS
Sbjct: 279 IEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSS 338
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+ +Y+KC V DA K+F+EMP R+V SW +I+ + Q+ Q + LEL+ M+ S +P+
Sbjct: 339 AVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPD 398
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T T+++S+C L +G+ H + +R GF V+++L+ MY KCG +E A VF
Sbjct: 399 SVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFE 458
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ K++VSWNSMIAGY+ G + I+LF M ++ ++P T ++ +C ++
Sbjct: 459 QIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQL 518
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL 415
GK + ++ ++ ++ S ++DL + G + A + + MP N V W S
Sbjct: 519 GKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMISG-- 575
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN--------PGCSWIEIMNV- 466
Y V + +A + M+ G+K + P CS + ++
Sbjct: 576 ---------------YVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG 620
Query: 467 --VYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ F E K ++E+ V+ L+D G V E
Sbjct: 621 KEIHNFIIESK--LEINEV--VMGALLDMYAKCGAVDE 654
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 146/271 (53%), Gaps = 6/271 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE--EMPVR 199
VT+ + + G +Q + + G N+ + SLI LY C + A VF+ E P+
Sbjct: 203 VTAGSALEELLGKLIHQKI-VSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL- 260
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
++ W ++AA + + LE++ R++ L+P+ FT+ S+L AC+G G +G G+
Sbjct: 261 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 320
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H I+ GF + V +S + MY KC E+A+ +F+ M +D+ SWN++I+ Y Q G
Sbjct: 321 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 380
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+A++LFEEM KPD++T VISSC +E GK + + G + S +
Sbjct: 381 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 440
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
VD+ G+ G LE A++ +Q+ N V W +
Sbjct: 441 VDMYGKCGCLEMAKEVFEQIQ-RKNVVSWNS 470
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 221/389 (56%), Gaps = 19/389 (4%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + H + +E++++D L + +C T ++ G+ L + GF N Y+GSSL+
Sbjct: 91 KALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLV 150
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
++Y+KC ++ +A +VF MP RNVV WT++IA Q + ++L+R M+ + ++ +D
Sbjct: 151 SMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDA 210
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T +++S+C GAL GR H G + V NSLI MY KCG+V +A +F+ +
Sbjct: 211 TIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGL 270
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEG 356
+D+ +W MI G+A +GL V A+DLF +M + +V P+ + FLGV+++C HGGLVE+G
Sbjct: 271 TKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQG 330
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
+F M+K + L P ++HY C+VDLLGRA LL EA FIK MP+ P+ V+W
Sbjct: 331 YHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACR 390
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAE LEP+ HV L+N+YA W VR M + PGC
Sbjct: 391 ASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSKKPGC 450
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
S+IE+ ++ F A D+S+ I L
Sbjct: 451 SFIEVDGCIHEFFAGDESHFETEAICNTL 479
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 134/263 (50%), Gaps = 2/263 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+ +D L+ A+++ ++ G+ + L+++ ++ +V ++LI +YS C A
Sbjct: 1 MTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASAR 60
Query: 191 KVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
V + P +VVSW IIA + + + L+ + M + ++ T ++L AC
Sbjct: 61 LVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACAR 120
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+GA+ G H + GF + +SL+SMY KCG VEEA VFN M +++V W SM
Sbjct: 121 TGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSM 180
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
IAG Q G A+DLF +M VK D T V+SSC G ++ G+ HGL
Sbjct: 181 IAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGL 240
Query: 369 KPELDHYSCVVDLLGRAGLLEEA 391
EL + ++D+ + G + +A
Sbjct: 241 GKELSVKNSLIDMYSKCGDVNKA 263
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++++ +SA +L G H ++++ S V N+LI+MY C A V
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 63
Query: 295 NNMH--GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
++ D+VSWN++IAGY + G+ +A+ F +M K++V+ D +T L V+ +C G
Sbjct: 64 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGA 123
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ G + + +G + S +V + + G++EEAR +MP N V W
Sbjct: 124 MKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMP-ERNVVCW 177
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 6/222 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + + D+ +K D + ++T V+SCG + G G + V +SL
Sbjct: 191 KEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSL 250
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS-MLEPN 235
I +YSKC + AY++F + R+V +WT +I FA L+L+ M + PN
Sbjct: 251 IDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPN 310
Query: 236 DFTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ F +L+AC+ G + QG H + I+ ++ + + + EA
Sbjct: 311 EVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFI 370
Query: 295 NNMH-GKDIVSWNSMI---AGYAQHGLAVRAIDLFEEMMKQR 332
+M D+V W S++ Q GLA A + E++ +R
Sbjct: 371 KDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKR 412
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 228/408 (55%), Gaps = 18/408 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + + +H + + + +S A+ +CG RN++ G +R + VGS
Sbjct: 479 DGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGS 538
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+LI++YS C + A VF E+ R+VV W +II+A AQ + L+L R M S +E
Sbjct: 539 ALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 598
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T S L AC+ AL QG+ H IR G + + NSLI MY +CG+++++ +F
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M +D+VSWN MI+ Y HG + A++LF++ +KP+ ITF ++S+C H GL+E
Sbjct: 659 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIE 718
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
EG YF M ++ + P ++ Y+C+VDLL RAG E +FI++MP PNA +W
Sbjct: 719 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AA LEP+ + +V +AN+Y+ W+ AA++R LMK++G+ P
Sbjct: 779 CRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPP 838
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
GCSWIE+ ++ F D S+ + +I ++ L +K +GYVP+ +
Sbjct: 839 GCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTN 886
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 4/278 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ + C N+R G + G ++GS L+ +Y + + DA ++F++M
Sbjct: 93 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
RNV SWTAI+ + + ++L+ +M N + P+ F F + AC+ G+
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
+ + +GF V S++ M+ KCG ++ A F + KD+ WN M++GY G
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSC 377
+A+ +M VKPD +T+ +IS G EE YF M KP + ++
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332
Query: 378 VVDLLGRAGLLEEARDFIKQM---PIYPNAVIWEAAES 412
++ + G EA ++M + PN++ +A S
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVS 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 152/321 (47%), Gaps = 37/321 (11%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVG 173
D E L S+ + E +K ++ +++AV++C + +R G I+ + +++ VG
Sbjct: 343 DFEAL-SVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 401
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA-----------------QEWQ 216
+SL+ Y+KCR + A + F + ++VSW A++A +A Q +
Sbjct: 402 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIE 461
Query: 217 VDM------------------CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
D+ LE ++ M + ++PN T + L+AC L G+
Sbjct: 462 PDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEI 521
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H +R V ++LISMY C ++E A VF+ + +D+V WNS+I+ AQ G +
Sbjct: 522 HGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRS 581
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
V A+DL EM V+ + +T + + +C + +GK + + GL + +
Sbjct: 582 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSL 641
Query: 379 VDLLGRAGLLEEARDFIKQMP 399
+D+ GR G ++++R MP
Sbjct: 642 IDMYGRCGSIQKSRRIFDLMP 662
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 6/203 (2%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMP-----VRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+++I+ Y++ +A K F EM NVVSWTA+IA Q L ++R M
Sbjct: 295 NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMV 354
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKCGNV 287
++PN T S +SACT L GR H I++ S + V NSL+ Y KC +V
Sbjct: 355 LEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSV 414
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
E A F + D+VSWN+M+AGYA G AI+L EM Q ++PD IT+ G+++
Sbjct: 415 EVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGF 474
Query: 348 RHGGLVEEGKVYFDSMAKHGLKP 370
G + +F M G+ P
Sbjct: 475 TQYGDGKAALEFFQRMHSMGMDP 497
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 227/386 (58%), Gaps = 20/386 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+T +TSC + G I+ + A+VYVGSSL+ +Y+K I +A +F+ +P
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+VVS TAII+ +AQ + LEL+R ++ ++ N T+TS+L+A +G AL G+
Sbjct: 222 ERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQ 281
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R SY+ + NSLI MY KCGN+ A +F+ +H + ++SWN+M+ GY++HG
Sbjct: 282 VHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGE 341
Query: 318 AVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEG-KVYFD-SMAKHGLKPELDH 374
++LF M+ + +VKPD++T L V+S C HGGL ++G +++D + K ++P+ H
Sbjct: 342 GREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKH 401
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LE 417
Y CVVD+LGRAG +E A +F+K+MP P+A IW E +LL +E
Sbjct: 402 YGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIE 461
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
PE A +V L+NLYA W+ +R LM K + PG SWIE+ V++ F A D S+
Sbjct: 462 PENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSH 521
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPEV 503
R E+ + L + K GYVP++
Sbjct: 522 PRREEVSAKVQELSARFKEAGYVPDL 547
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 162/300 (54%), Gaps = 18/300 (6%)
Query: 107 QLLDTPVVDVEKLISMH-HD-------LHRERLKVDASF--LSTAVTSCGSTRNIRGGAP 156
+LL T + ++++H HD LH +D +F +T + C R IR G
Sbjct: 20 RLLSTFPSNSHHVLNIHIHDTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQR 79
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
I+T ++ VY+ + LI Y KC + DA VF+ MP RNVVSWTA+I+A++Q
Sbjct: 80 VHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGY 139
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
L L+ M S EPN+FTF ++L++C GS GR H I++ + +++ V +S
Sbjct: 140 ASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSS 199
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
L+ MY K G + EA +F + +D+VS ++I+GYAQ GL A++LF + ++ ++ +
Sbjct: 200 LLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSN 259
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY----SCVVDLLGRAGLLEEAR 392
+T+ V+++ ++ GK + H L+ E+ Y + ++D+ + G L AR
Sbjct: 260 YVTYTSVLTALSGLAALDHGK----QVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYAR 315
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + L RE ++ + ++ +T+ + G +R+ + V + +SL
Sbjct: 242 EEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSL 301
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPN 235
I +YSKC + A ++F+ + R V+SW A++ +++ + LEL+ +M + + ++P+
Sbjct: 302 IDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPD 361
Query: 236 DFTFTSILSACTGSGALGQG 255
T ++LS C+ G +G
Sbjct: 362 SVTVLAVLSGCSHGGLEDKG 381
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 235/414 (56%), Gaps = 25/414 (6%)
Query: 123 HHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
H L + + D + +C + G ++ GF ++VY+ +SL+ Y+
Sbjct: 116 HRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYAT 175
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
C + A VF+ M R++VSW +I AF + + D L L+ M+ EP+ +T SI
Sbjct: 176 CDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQSI 234
Query: 243 LSACTGSGALGQGRSAHCQTIR---MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+AC G G+L G AH ++ + + + SL+ MYCKCG++E A+ +F+ M
Sbjct: 235 ANACAGMGSLSLGMWAHVFLLKKFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPK 294
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKV 358
+D+ SWNSMI G++ HG A++ F M++ +++ P+AITF+GV+S+C HGGLV EG+
Sbjct: 295 RDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRR 354
Query: 359 YFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------- 407
YFD M ++ +KPEL+HY C+VDLL RAGL++EA D + MP+ P+ VIW
Sbjct: 355 YFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQ 414
Query: 408 ----EAAE--SRLLLEPE---CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
E +E +R +LE E C+ +V L+ +YA W+ VRKLM DKG+ PGC
Sbjct: 415 NAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGC 474
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDAS 512
S IEI V + F A D S+ + EI LD + ++++ +GY P+ + + D +
Sbjct: 475 SSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQAPMVDET 528
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 6/236 (2%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW-QVDMCLELY-RM 226
N + S I +S + A++VF ++ N W A+I A A+ + + LY RM
Sbjct: 59 NTFFLYSRILHFSSLHDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRM 118
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
+ + + TF +L AC AL +G H Q +++GF S + + NSL+ Y C
Sbjct: 119 LEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDR 178
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A VF+ M + +VSWN +I + + G A++LF EM K +PD T + ++
Sbjct: 179 LDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQSIANA 237
Query: 347 CRHGGLVEEG---KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
C G + G V+ ++ + +VD+ + G LE A +MP
Sbjct: 238 CAGMGSLSLGMWAHVFLLKKFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMP 293
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/435 (36%), Positives = 239/435 (54%), Gaps = 51/435 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+ L+S+ LHR+ + S L+++ +C + + G LA++ G N YV ++L
Sbjct: 401 QALVSLQA-LHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNAL 459
Query: 177 ITLYSKCRVI-------------------------------IDAYKVFEEMPVRNVVSWT 205
ITLY K R I +A VF MP +VVSWT
Sbjct: 460 ITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWT 519
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
II+A AQ Q + +E++R M + PN T +L GA G+ H I++
Sbjct: 520 TIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKL 579
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G S + VAN+L+SMY KC + + ++ VF++M +DI +WN++I GYAQHGL AI ++
Sbjct: 580 GMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMY 638
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
+ M+ V P+ +TF+G++ +C H GLV+EG +F SM+ +GL P L+HY+C+VDLLGR
Sbjct: 639 QLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGR 698
Query: 385 AGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQL 427
AG ++ A FI MPI P++VIW AAE +EP A +V L
Sbjct: 699 AGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVML 758
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N+Y+ WD+ A+VRKLMK++G+ +PGCSW++I N ++ F D+ + ++ I L
Sbjct: 759 SNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATL 818
Query: 488 DFLVDQMKTLGYVPE 502
L +K GYVP+
Sbjct: 819 WELYTLLKATGYVPD 833
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 11/222 (4%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV +++IT Y + ++ +A +F MP RN +SW +IA +A+ + + L + +
Sbjct: 351 NVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALH 410
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG--FFSYIQVANSLISMYCKCGN 286
+ P+ + TS AC+ AL G+ H ++ G F SY V N+LI++Y K +
Sbjct: 411 RKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSY--VCNALITLYGKYRS 468
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+ +F+ M KD VS+NS ++ Q+ L A D+F M PD +++ +IS+
Sbjct: 469 IGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM----PSPDVVSWTTIISA 524
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
C E F SM + EL + + LLG +G L
Sbjct: 525 CAQADQGNEAVEIFRSMLH---ERELPNPPILTILLGLSGNL 563
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 14/237 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++++T Y +++ +A +FE MP RN VSWT +I+ + Q +++R M +
Sbjct: 161 NTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMT 220
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN-VEEAVY 292
P S+LSA G G S H + GF + V ++++ Y K N ++ AV
Sbjct: 221 PEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVK 280
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK--PDAITFLGVISSCRHG 350
F M ++ +W+++IA +Q G R D F + +K P + L ++
Sbjct: 281 FFEGMAARNEYTWSTIIAALSQAG---RIDDAFAVYQRDPLKSVPSRTSMLTGLARY--- 334
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G +++ K+ FD + +P + ++ ++ + +++EA D +MP + N + W
Sbjct: 335 GRIDDAKILFDQIH----EPNVVSWNAMITGYMQNEMVDEAEDLFNRMP-FRNTISW 386
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 45/282 (15%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIID-AYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
L +TGF +V VG++++ Y+K ++D A K FE M RN +W+ IIAA +Q ++D
Sbjct: 248 LVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRID 307
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+Y+ R+ + + TS+L+ G + + Q S+ N++I
Sbjct: 308 DAFAVYQ--RDPLKSVP--SRTSMLTGLARYGRIDDAKILFDQIHEPNVVSW----NAMI 359
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
+ Y + V+EA +FN M ++ +SW MIAGYA++G + +A+ + + ++ + P
Sbjct: 360 TGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLS 419
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC--VVDLLGR------------ 384
+ +C + +E GK K G + + Y C ++ L G+
Sbjct: 420 SLTSSFFACSNIEALETGKQVHSLAVKAGC--QFNSYVCNALITLYGKYRSIGSVRQIFD 477
Query: 385 -------------------AGLLEEARDFIKQMPIYPNAVIW 407
L +EARD MP P+ V W
Sbjct: 478 RMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP-SPDVVSW 518
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 45/187 (24%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
N+ G+ L++ Y++ + DA +VF+ M VRN V+W A++ + Q + + +L+ M
Sbjct: 93 GNLRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAM 152
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ + N++++ YC +
Sbjct: 153 PS---------------------------------------RDVSSWNTMLTGYCHSQLM 173
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYA---QHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
EEA +F M ++ VSW MI+GY QHG RA D+F M+ + + P+ + V+
Sbjct: 174 EEARNLFERMPERNGVSWTVMISGYVLIEQHG---RAWDMFRTMLCEGMTPEQPNLVSVL 230
Query: 345 SSCRHGG 351
S+ RH G
Sbjct: 231 SAVRHLG 237
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+A +VF+ MP R++++W ++I A+ D R + +++ N T T +LS
Sbjct: 51 EAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAG----RSLADAISGGNLRTGTILLS--- 103
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G G+ R A MG + + N++++ Y + G++ A +F+ M +D+ SWN+
Sbjct: 104 GYARAGRVRDARRVFDGMGVRNTV-AWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNT 162
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M+ GY L A +LFE M ++ + G + +HG + F +M G
Sbjct: 163 MLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWD----MFRTMLCEG 218
Query: 368 LKPELDHYSCV---VDLLGRAGLLE 389
+ PE + V V LG+ G+LE
Sbjct: 219 MTPEQPNLVSVLSAVRHLGKPGILE 243
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 32/152 (21%)
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
+ G + EA VF++M +DI++WNSMI Y +G+ L + + ++ I
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTI---- 100
Query: 343 VISSCRHGGLVEEGKVYFDSMA---------------KHG----------LKPELDHYSC 377
++S G V + + FD M ++G P D S
Sbjct: 101 LLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSW 160
Query: 378 VVDLLG--RAGLLEEARDFIKQMPIYPNAVIW 407
L G + L+EEAR+ ++MP N V W
Sbjct: 161 NTMLTGYCHSQLMEEARNLFERMP-ERNGVSW 191
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 232/407 (57%), Gaps = 22/407 (5%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + I + + E ++ + LS+ + +C + N++ G IR A+++V S
Sbjct: 288 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 347
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SLI LY KC I A VF+ MP NVVSW +I+ + + L ++ MR + ++P
Sbjct: 348 SLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKP 407
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ TFTS+L AC+ L +G+ H I V +L+ MY KCG V+EA+++F
Sbjct: 408 DAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIF 467
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
N + +D VSW SMIA Y HG A A+ LFE+M + KPD +TFL ++S+C H GLV+
Sbjct: 468 NQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVD 527
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV-----IWE 408
EG YF+ M A++G KP ++HYSC++DLLGR G L EA + +++ P V ++
Sbjct: 528 EGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFS 587
Query: 409 AAE-----------SRLLLE--PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A RLL+E P+ +T++ L+N+YA V+ WD+ +VR +K+ GLK N
Sbjct: 588 ACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKN 647
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTR---LSEILPVLDFLVDQMKTLGY 499
PGCSWIE+ ++ F EDKS+ + + E + +L V++ + L +
Sbjct: 648 PGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVLSF 694
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 156/283 (55%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + + ++ K D+ L+T ++SC ++ G +R+GF + +V S+L
Sbjct: 189 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 248
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC + A +VFE++ +NVVSW ++IA ++ + C+EL+R M + P
Sbjct: 249 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 308
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T +SIL AC+ S L G+ H IR + I V +SLI +Y KCGN+ A VF N
Sbjct: 309 TTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQN 368
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M ++VSWN MI+GY + G + A+ +F +M K VKPDAITF V+ +C ++E+G
Sbjct: 369 MPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG 428
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K + + + L+ ++D+ + G ++EA Q+P
Sbjct: 429 KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 471
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 194/398 (48%), Gaps = 33/398 (8%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E L H LH LK DA + + +C + G I++GF +V V SS
Sbjct: 87 IEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSS 146
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+ +Y+KC V DA K+F+EMP R+V SW +I+ + Q+ Q + LEL+ M+ S +P+
Sbjct: 147 AVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPD 206
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T T+++S+C L +G+ H + +R GF V+++L+ MY KCG +E A VF
Sbjct: 207 SVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFE 266
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ K++VSWNSMIAGY+ G + I+LF M ++ ++P T ++ +C ++
Sbjct: 267 QIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQL 326
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL 415
GK + ++ ++ ++ S ++DL + G + A + + MP N V W S
Sbjct: 327 GKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMISG-- 383
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN--------PGCSWIEIMNV- 466
Y V + +A + M+ G+K + P CS + ++
Sbjct: 384 ---------------YVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG 428
Query: 467 --VYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ F E K ++E+ V+ L+D G V E
Sbjct: 429 KEIHNFIIESK--LEINEV--VMGALLDMYAKCGAVDE 462
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 150/280 (53%), Gaps = 5/280 (1%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D + L + + +C ++ ++ G + G N+ + SLI LY C + A V
Sbjct: 1 MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60
Query: 193 FE--EMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGS 249
F+ E P+ ++ W ++AA + + LE++ R++ L+P+ FT+ S+L AC+G
Sbjct: 61 FQTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGL 119
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
G +G G+ H I+ GF + V +S + MY KC E+A+ +F+ M +D+ SWN++I
Sbjct: 120 GRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVI 179
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+ Y Q G +A++LFEEM KPD++T VISSC +E GK + + G
Sbjct: 180 SCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFA 239
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S +VD+ G+ G LE A++ +Q+ N V W +
Sbjct: 240 LDGFVSSALVDMYGKCGCLEMAKEVFEQIQ-RKNVVSWNS 278
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 242/440 (55%), Gaps = 52/440 (11%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
++E L L+ LK D L++ +++C + + G +R + VG+
Sbjct: 255 NLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN 314
Query: 175 SLITLYSK------CRVIID---------------------------AYKVFEEMPVRNV 201
+LI++Y+K R+I++ A ++F ++ R+V
Sbjct: 315 ALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDV 374
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
V+WTA+I + Q + LEL+R+M N EPN +T ++LS + L G+ H
Sbjct: 375 VAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHAS 434
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYAQHGLAVR 320
I+ G S V N+LI+MY K GN+ A VF+ +G K+IVSW SMI AQHGL
Sbjct: 435 AIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKE 494
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVV 379
AI+LFE M+ +KPD IT++GV+S+C H GLVE+G+ Y++ M + H ++P L HY+C++
Sbjct: 495 AINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMI 554
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAA 422
DL GRAGLL+EA FI+ MPI P+ + W AAE LL++P +
Sbjct: 555 DLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSG 614
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
++ LAN+Y+ W+ AA+ RKLMKD+G++ G SWI I N V+ F ED + + E
Sbjct: 615 AYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDE 674
Query: 483 ILPVLDFLVDQMKTLGYVPE 502
I ++ + +++K +G++P+
Sbjct: 675 IYKLMAEIWEEIKKMGFIPD 694
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 151/350 (43%), Gaps = 72/350 (20%)
Query: 108 LLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI 167
L D + K+IS ER+ +S ++SC + + + G ++ G
Sbjct: 122 LFDNAIWMFAKMIS-------ERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLG 174
Query: 168 ANVYVGSSLITLYSKC------RVIIDAYKV-------------------------FEEM 196
+ V V +SL+ +Y+KC +V+ D V FE+M
Sbjct: 175 SCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKM 234
Query: 197 PVRNVVSWTAIIAAFAQE-WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
P R++VSW ++I+ ++Q+ + ++ +M+ L+P++FT SILSAC L G
Sbjct: 235 PDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIG 294
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKC------------------------------- 284
+ H +R + V N+LISMY K
Sbjct: 295 KQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYT 354
Query: 285 --GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
GNV+ A +FN + +D+V+W +MI GY Q+GL A++LF M+ + +P++ T
Sbjct: 355 KLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAA 414
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
++S ++E GK S K G + ++ + + G + A+
Sbjct: 415 MLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAK 464
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 63/258 (24%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV----------- 201
G C I+ G VY+ ++L+T Y+K + A+ VF+EMP+++
Sbjct: 28 AGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYA 87
Query: 202 --------------------VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
VSWTAII + Q D + ++ M + + P+ FT ++
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN--------------- 286
+LS+C + L GR H +++G S + VA SL++MY KCG+
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 287 ----------------VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
E A F M +DIVSWNSMI+GY+Q G + A+ +F +M+
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267
Query: 331 Q-RVKPDAITFLGVISSC 347
+ +KPD T ++S+C
Sbjct: 268 EPSLKPDNFTLASILSAC 285
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 240/431 (55%), Gaps = 50/431 (11%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + + E + VD L+T ++ C +T +I G+ L +++G V V +SLI++
Sbjct: 377 VELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISM 436
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NSML 232
Y+KC + +A +F M R++VSWT +I A++Q + E + M N+ML
Sbjct: 437 YAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAML 496
Query: 233 E-------------------------PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
P+ T+ ++ C GA G T+++G
Sbjct: 497 GAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGL 556
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
V N++I+MY KCG + EA F+ + KD+VSWN+MI GY+QHG+ +AI++F++
Sbjct: 557 ILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDD 616
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
++ + KPD I+++ V+S C H GLVEEGK YFD M + H + P L+H+SC+VDLLGRAG
Sbjct: 617 ILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAG 676
Query: 387 LLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLAN 429
L EA++ I +MP+ P A +W AA+ L+ + ++ LA
Sbjct: 677 HLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAK 736
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA D +A+VRKLM+DKG+K +PG SW+E+ N V+ F+AED S+ ++ I LD
Sbjct: 737 MYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDE 796
Query: 490 LVDQMKTLGYV 500
L++++ LGYV
Sbjct: 797 LMEKIAHLGYV 807
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 137/261 (52%), Gaps = 5/261 (1%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + M D+H + ++ D++ ++++T+C ++ G IR + YV S+
Sbjct: 272 VREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASA 331
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++ LY+KC +A +VF + RN VSWT +I F Q +EL+ MR ++ +
Sbjct: 332 MVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVD 391
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
F +++S C + + G H ++ G + V+NSLISMY KCGN++ A +FN
Sbjct: 392 QFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFN 451
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M +DIVSW MI Y+Q G +A + F++M + V IT+ ++ + G E+
Sbjct: 452 FMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNV----ITWNAMLGAYIQHGAEED 507
Query: 356 G-KVYFDSMAKHGLKPELDHY 375
G K+Y D + + + P+ Y
Sbjct: 508 GLKMYSDMLTEKDVIPDWVTY 528
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 97/174 (55%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S++ Y+K + A ++F+ MP R+VVSW +I+A ++ +V L++ M +
Sbjct: 229 NSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVR 288
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T+TS L+AC +L G+ H Q IR VA++++ +Y KCG +EA V
Sbjct: 289 PDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRV 348
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
F+++ ++ VSW +I G+ Q+G +++LF +M + + D +IS C
Sbjct: 349 FSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGC 402
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 44/298 (14%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV + ++ Y+K + DA ++F MP R+V SW I++ + Q Q L+++ MR
Sbjct: 91 NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150
Query: 229 NSMLE-PNDFTFTSILSACTGSGALGQGRSA----------------HCQT------IRM 265
+ PN FTF ++ +C GALG A QT +R
Sbjct: 151 QTGDSLPNAFTFGCVMKSC---GALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRC 207
Query: 266 GFFSY------------IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G + I NS++ Y K V+ A+ +F +M +D+VSWN +I+ +
Sbjct: 208 GAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALS 267
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ G A+D+ +M + V+PD+ T+ +++C +E GK + ++ P +D
Sbjct: 268 KSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRN--LPHID 325
Query: 374 HY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLAN 429
Y S +V+L + G +EA+ + N+V W L+ C + V+L N
Sbjct: 326 PYVASAMVELYAKCGCFKEAKRVFSSLR-DRNSVSWTVLIGG-FLQYGCFSESVELFN 381
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 33/182 (18%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG----------------- 285
L +C AL R+ H + I +G S + + N+L+ Y CG
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 286 ---------------NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
++ +AV +F M +D+ SWN++++GY Q G + A+D+F M +
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151
Query: 331 QRVK-PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
P+A TF V+ SC G E ++K + + D + +VD+L R G ++
Sbjct: 152 TGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMD 211
Query: 390 EA 391
A
Sbjct: 212 FA 213
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 215/362 (59%), Gaps = 20/362 (5%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
AIR G+ + +V ++LI Y+K ++ A VF MP RNVVSW+A+I +A+ +
Sbjct: 205 AIRRGYALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADA 264
Query: 221 LELYR--MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+EL++ M ++ L PN T S+L+AC G AL G+ H +R GF S + V N+L+
Sbjct: 265 IELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALM 324
Query: 279 SMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+MY +CG +E ++F + H +D+VSWNS+I+GY HG A+ +FEEM+ P
Sbjct: 325 AMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSI 384
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
ITF+ V+ +C H GLV EGK+ F+SM ++G+ P +HY+C+VDLLGRAG L+EA + I+
Sbjct: 385 ITFISVLGACSHAGLVNEGKMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRS 444
Query: 398 MPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQA 440
M I P+ +W E A S L LEP A +V LA++YA + +Q
Sbjct: 445 MHIEPSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQV 504
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
+++L+++ L+ GCSWIE+ ++ F + D N + ++ ++ V QMK GYV
Sbjct: 505 GVLKELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYV 564
Query: 501 PE 502
P+
Sbjct: 565 PD 566
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 166 FIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
F ++ ++ + LI Y+ + A +VF+E PV+N+ W A++ A A D L
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLA 163
Query: 226 MMRNSMLEPNDFTFTSILSACTG-----SGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
M + + +++T L AC + A + R H IR G+ + VA +LI
Sbjct: 164 DMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDC 223
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK--PDAI 338
Y K G V A VF M +++VSW++MI YA++ AI+LF++MM P++I
Sbjct: 224 YAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSI 283
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
T + V+++C + GK+ + + G + + ++ + R G LE R K +
Sbjct: 284 TIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWI 343
Query: 399 PIYPNAVIWEA 409
+ V W +
Sbjct: 344 GHRRDVVSWNS 354
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 232/419 (55%), Gaps = 20/419 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ I + H++ RE + D ++T + +C ++ G +N++V ++L
Sbjct: 81 DEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNAL 140
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC + DA VF EMPV++++SW +I +++ + L L+ M M +P+
Sbjct: 141 MDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEM-KPDG 199
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T IL AC +L +G+ H +R GFFS QVAN+L+ MY KCG A +F+
Sbjct: 200 TTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDM 259
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ KD+++W MIAGY HG AI F EM + ++PD ++F+ ++ +C H GL++EG
Sbjct: 260 IPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEG 319
Query: 357 KVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA------ 409
+F+ M +KP+L+HY+C+VDLL R+G L A FIK MPI P+A IW A
Sbjct: 320 WRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCR 379
Query: 410 -----------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AE LEPE +V LAN YA W++ ++R+ + +GLK NPGC
Sbjct: 380 IHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGC 439
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD-DASHKRT 516
SWIE+ + V+ F A + S+ + +I +L L +MK GY P+ ++ D+ K T
Sbjct: 440 SWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKET 498
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 141/262 (53%), Gaps = 10/262 (3%)
Query: 141 AVTSCGST---RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
A +CG R + G C+ +T F ++L+ +Y+KC V+ A VF+ M
Sbjct: 7 ACANCGDVSLGRAVHGSGVKACVHWKTTFC------NTLLDMYAKCGVLDGAILVFDLMS 60
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
VR VV+WT++IAA+A+E D + L+ M + P+ FT T++L AC +G+L G+
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H S I V N+L+ MY KCG++E+A VF M KDI+SWN+MI GY+++ L
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ LF +M+ + +KPD T ++ +C ++ GK + ++G + +
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239
Query: 378 VVDLLGRAGLLEEARDFIKQMP 399
+VD+ + G+ AR +P
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIP 261
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
SIL AC G + GR+ H ++ N+L+ MY KCG ++ A+ VF+ M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ +V+W S+IA YA+ GL+ AI LF EM ++ V PD T V+ +C G +E GK
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ + ++ ++ + + ++D+ + G +E+A +MP+
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPV 162
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 217/351 (61%), Gaps = 18/351 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
V ++L+ +Y+K A+ VFE+M ++V+SWT+++ + L L+ MR
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+ ++LSAC L G+ H ++ G S + V NSL+SMY KCG +E+A
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF++M +D+++W ++I GYAQ+G +++ + +M+ VKPD ITF+G++ +C H G
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183
Query: 352 LVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-- 408
LVE G+ YF SM + +G+KP +HY+C++DLLGR+G L EA++ + QM + P+A +W+
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243
Query: 409 ---------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
AA + LEP+ A +V L+NLY+ W++AA+ R+LMK +G+
Sbjct: 244 LAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVS 303
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
PGCSWIE+ + V+RF +ED+S+ R +EI +D ++ +K GYVP+++
Sbjct: 304 KEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMN 354
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 236/413 (57%), Gaps = 18/413 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D ++++ M + R D L + T+CG + G A G + + + +
Sbjct: 252 DWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLAT 311
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC + A ++F+ M R+VV+W+A+I+ + Q + L ++ M+ + + P
Sbjct: 312 ALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNP 371
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
ND T S+LSAC GAL G+ H R + + +L+ Y KCG +++AV F
Sbjct: 372 NDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAF 431
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+M ++ +W ++I G A +G + A++LF M++ ++P +TF+GV+ +C HG LVE
Sbjct: 432 ESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVE 491
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
EG+ +F SM + +G+ P ++HY C+VDLLGRAGL++EA FI+ MPI PNAV+W
Sbjct: 492 EGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSA 551
Query: 408 -----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
EA + + L+P + ++ L+N YA V W AA VRK MK+KG++ P
Sbjct: 552 CTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIP 611
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
GCS IE+ ++ F AED + +L+EI + +++ +K +GY+P + ++D
Sbjct: 612 GCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLD 664
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 143/278 (51%), Gaps = 5/278 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D ++ V SC ++ G Q A + GF+ + +V +SLI +Y+ C ++ A+ +F
Sbjct: 170 DQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLF 229
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT--GSGA 251
+ V+ V++W A+IA + + +E+++ M ++ T S+ +AC G
Sbjct: 230 HTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDAN 289
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
LGQ + + + G +A +L+ MY KCG +++A +F+ MH +D+V+W++MI+G
Sbjct: 290 LGQWIAEYAE--EKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISG 347
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Y Q A+ +F EM V P+ +T + V+S+C G +E GK + + L
Sbjct: 348 YTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLT 407
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + +VD + G +++A + MP+ N W A
Sbjct: 408 VILGTALVDFYAKCGCIKDAVKAFESMPVR-NTWTWTA 444
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
P R+ S+ +I +F + + L L+ M+ ++ + P+ T + + +C+ L G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R + GF V NSLI MY CG+V A +F+ + K +++WN+MIAGY ++
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G +++F+ M++ R D +T L V ++C G G+ + + G+ +
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 376 SCVVDLLGRAGLLEEARDFIKQM 398
+ +VD+ + G L++AR +M
Sbjct: 311 TALVDMYAKCGELDKARRLFDRM 333
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 225/393 (57%), Gaps = 19/393 (4%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
CG R++ G ++ G +V+VGS L+ ++ KC ++ A KVF+ + RNVV W
Sbjct: 237 CGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVW 296
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
T+++ A+ Q + + L L M N+FTF +L+A G AL G H + +
Sbjct: 297 TSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEK 356
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
+G + + V N+LI+MY KCG ++ + VF +M +DI++WN+MI GY+QHGL +A+ L
Sbjct: 357 LGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLL 416
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLG 383
F++M+ P+ +TF+GV+S+C H LV EG Y + + KH ++P L+HY+CVV +L
Sbjct: 417 FQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLC 476
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQ 426
RAG+LEEA +F++ + + V W AE+ L ++P T+
Sbjct: 477 RAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTL 536
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
L+N+YA R WD +RK+M+++ +K PG SWIEI N V+ F ++ ++ +I
Sbjct: 537 LSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNK 596
Query: 487 LDFLVDQMKTLGYVPEVHEEKVDDASHKRTEPF 519
+ L++ +K LGYVP + E + D ++ E +
Sbjct: 597 VQLLLEMIKQLGYVPNI-EAVLHDVEDEQKESY 628
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 6/260 (2%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+ +SLI LY KC + A +F+EM +R+VVS+ ++ + + ++L++ M
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+S+ +PN++ FT++LSAC SG + +G H + G + V +SL+ MY KC +V+
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173
Query: 289 EAVYVFNNMHG-----KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
A+ V + HG D +NS++ + G A+++ M+ + V D++T++ V
Sbjct: 174 LALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
+ C + G + K GL ++ S +VD+ G+ G + AR + N
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQ-NRN 292
Query: 404 AVIWEAAESRLLLEPECAAT 423
V+W + + L E T
Sbjct: 293 VVVWTSLMTAYLQNGEFEET 312
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 144/324 (44%), Gaps = 19/324 (5%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLKVDASFLS-----------TAVTSCGSTRN 150
+FD++ VV L+ +H H E +K+ + +S T +++C +
Sbjct: 77 LFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGR 136
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR-----NVVSWT 205
+ G + G + + +V SSL+ +YSKC + A +V E + +
Sbjct: 137 VFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYN 196
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
+++ A + ++ +E+ M + + + T+ S++ C LG G H Q ++
Sbjct: 197 SVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKG 256
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + V + L+ M+ KCG+V A VF+ + +++V W S++ Y Q+G ++L
Sbjct: 257 GLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLL 316
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
M ++ + TF ++++ + G + + K G+K + + ++++ +
Sbjct: 317 SCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKC 376
Query: 386 GLLEEARDFIKQMPIYPNAVIWEA 409
G ++ + D M + + W A
Sbjct: 377 GCIDSSYDVFFDMR-NRDIITWNA 399
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 228/396 (57%), Gaps = 19/396 (4%)
Query: 127 HRERLKVDAS-FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
H E+ + S + + C ST+ + G+ A++ NVYVGS+L+ +Y KC
Sbjct: 174 HGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDF 233
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+A +VFE +P +N+VSWTAI+ A+ Q + L+L+ M + PN+FT+ L++
Sbjct: 234 PHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNS 293
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G L G + T++ G + + V N+L++MY K G+VE+A VF +M +D+VSW
Sbjct: 294 CAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSW 353
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
NS+I GYA HG A A++ F +M+ P +TF+GV+S+C GLV+EG Y + M K
Sbjct: 354 NSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMK 413
Query: 366 H-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------------- 409
G+KP +HY+C+V LL R G L+EA FI+ I + V W +
Sbjct: 414 EVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGH 473
Query: 410 --AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
AE L+P+ T+V L+N+YA WD +VR+LM++ G++ PG SWI++ + V
Sbjct: 474 RVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEV 533
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ F +EDK + + +I L L+D++K +GYVP +
Sbjct: 534 HVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNI 569
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 5/212 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + D+ E ++ + + A+ SC ++ G ++TG + V ++L
Sbjct: 266 EDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNAL 325
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +YSK + DA +VF MP R+VVSW +II +A + +E + M + P+
Sbjct: 326 MNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSY 385
Query: 237 FTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV-YVF 294
TF +LSAC G + +G + +G + ++ + C+ G ++EA ++
Sbjct: 386 VTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIE 445
Query: 295 NNMHGKDIVSWNSMIAG---YAQHGLAVRAID 323
+N G D+V+W S+++ Y +GL R +
Sbjct: 446 SNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAE 477
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LI LY KC + A +VF+ MP RN VS +++ +A + L L R+ +
Sbjct: 54 NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALLRVADFGL-- 111
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
N++ +S ++A + GR H I+ G + V ++++ MYC+C +++EAV
Sbjct: 112 -NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVK- 169
Query: 294 FNNMHGKDIVSWNSMI 309
++ HG+ + S +
Sbjct: 170 YSKKHGEKCRAMGSCV 185
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 214/361 (59%), Gaps = 20/361 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ G ++V+V S+LI +YSK +++A KVF EM + V W +IIAAFAQ D L
Sbjct: 410 MKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEAL 469
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
LY+ MR + T TS+L ACT L GR AH ++ F + + N+L+ MY
Sbjct: 470 HLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMY 527
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
CKCG++E+A ++FN M KD++SW++MIAG AQ+G ++ A++LFE M Q KP+ IT L
Sbjct: 528 CKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITIL 587
Query: 342 GVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
GV+ +C H GLV EG YF SM +G+ P +HY C++DLLGRA L++ I +M
Sbjct: 588 GVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNC 647
Query: 401 YPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
P+ V W AA+ L L+P+ +V L+N+YA + W+ A V
Sbjct: 648 EPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEV 707
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
R+ MK +G++ PGCSWIE+ ++ F DKS+ ++ EI L+ + ++ GYVP+
Sbjct: 708 RRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDT 767
Query: 504 H 504
+
Sbjct: 768 N 768
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 135/275 (49%), Gaps = 9/275 (3%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ R + D+ S + C + +R G G+ ++ + LI +Y K +
Sbjct: 276 MERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNL 335
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ +A +F++MP RNVVSWT +I+A++ D + L M + PN FTF+S+L A
Sbjct: 336 LEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRA 395
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C L Q H +++G S + V ++LI +Y K G + EA+ VF M D V W
Sbjct: 396 CERLYDLKQ---LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVW 452
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
NS+IA +AQH A+ L++ M + D T V+ +C L+E G+
Sbjct: 453 NSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGR----QAHV 508
Query: 366 HGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQM 398
H LK + D + ++D+ + G LE+A+ +M
Sbjct: 509 HVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRM 543
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ T++ ++ C GA+ +G+ H G+ + N LI+MY K +EEA +F
Sbjct: 284 DSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLF 343
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M +++VSW +MI+ Y+ L RA+ L M + V P+ TF V+ +C +
Sbjct: 344 DKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACER---LY 400
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K + K GL+ ++ S ++D+ + G L EA ++M + ++V+W +
Sbjct: 401 DLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM-MTGDSVVWNS 454
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
A+ + + M ++ V D+IT+ +I C G V EGK + +G P+ + +++
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + LLEEA+ +MP N V W
Sbjct: 329 MYVKFNLLEEAQVLFDKMP-ERNVVSW 354
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 207/353 (58%), Gaps = 18/353 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV +++IT Y++C I +A +F++MP R+ VSW A+IA ++Q L L+ M
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N +F+S LS C AL G+ H + ++ G+ + V N+L+ MYCKCG++E
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA +F M GKDIVSWN+MIAGY++HG A+ FE M ++ +KPD T + V+S+C
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV++G+ YF +M + +G+ P HY+C+VDLLGRAGLLE+A + +K MP P+A IW
Sbjct: 522 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 581
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AA+ +EPE + +V L+NLYA W ++R M+DK
Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 641
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
G+K PG SWIEI N + F D+ + EI L+ L +MK GYV +
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 694
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 123/236 (52%), Gaps = 16/236 (6%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ +V +++IT Y++ I +A ++F+E PV++V +WTA+++ + Q V+ EL+
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF-- 304
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAH----CQTIRMGFFSYIQVANSLISMYC 282
+ M E N+ ++ ++L+ + + C+ + N++I+ Y
Sbjct: 305 --DKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN--------VSTWNTMITGYA 354
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
+CG + EA +F+ M +D VSW +MIAGY+Q G + A+ LF +M ++ + + +F
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+S+C +E GK + K G + + ++ + + G +EEA D K+M
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 99/193 (51%), Gaps = 2/193 (1%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE +++ S S+A+++C + G ++ G+ +VG++L+ +Y KC
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I +A +F+EM +++VSW +IA +++ ++ L + M+ L+P+D T ++LSA
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 246 CTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIV 303
C+ +G + +GR + T G Q ++ + + G +E+A + NM D
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 304 SWNSMIAGYAQHG 316
W +++ HG
Sbjct: 580 IWGTLLGASRVHG 592
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+I Y + R + A ++FE MP R+V SW +++ +AQ + C++ R + + M E N
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ----NGCVDDARSVFDRMPEKN 187
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
D ++ ++LSA + + + C + + N L+ + K + EA F+
Sbjct: 188 DVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD 243
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+M+ +D+VSWN++I GYAQ G A LF+E Q D T+ ++S +VEE
Sbjct: 244 SMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEE 299
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLG--RAGLLEEARDFIKQMP 399
+ FD M PE + S L G + +E A++ MP
Sbjct: 300 ARELFDKM------PERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 118/241 (48%), Gaps = 27/241 (11%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++++ Y++ + DA VF+ MP +N VSW A+++A+ Q +++ L++ N L
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL- 219
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA-----NSLISMYCKCGNVE 288
++ +L + + R FF + V N++I+ Y + G ++
Sbjct: 220 ---VSWNCLLGGFVKKKKIVEARQ---------FFDSMNVRDVVSWNTIITGYAQSGKID 267
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA +F+ +D+ +W +M++GY Q+ + A +LF++M ++ + +++ +++
Sbjct: 268 EARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYV 323
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
G +E K FD M + ++ ++ + G + EA++ +MP + V W
Sbjct: 324 QGERMEMAKELFDVMPCRNVST----WNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWA 378
Query: 409 A 409
A
Sbjct: 379 A 379
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N +IS Y + G E A +F+ M +D+VSWN MI GY ++ +A +LF E+M +R
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF-EIMPER-- 155
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSM 363
D ++ ++S G V++ + FD M
Sbjct: 156 -DVCSWNTMLSGYAQNGCVDDARSVFDRM 183
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
S I+ N IS Y + G EA+ VF M VS+N MI+GY ++G A LF+EM
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA--G 386
++ + + G + + R+ G E F+ M PE D S L G A G
Sbjct: 122 PERDLVSWNVMIKGYVRN-RNLGKARE---LFEIM------PERDVCSWNTMLSGYAQNG 171
Query: 387 LLEEARDFIKQMPIYPNAVIWEA 409
+++AR +MP N V W A
Sbjct: 172 CVDDARSVFDRMP-EKNDVSWNA 193
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 221/387 (57%), Gaps = 18/387 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D S+ + +C + + G CLA++ G N+YV +LI +Y+ C + A +VF
Sbjct: 134 DDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVF 193
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+++ VV++ AII + A+ + + L L+R ++ S L+P D T LS+C GAL
Sbjct: 194 DKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALD 253
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
GR H + GF Y++V +LI MY KCG++++AV VF +M +D +W++MI YA
Sbjct: 254 LGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYA 313
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPEL 372
HG +AI + EM K +V+PD ITFLG++ +C H GLVEEG YF SM ++G+ P +
Sbjct: 314 THGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSI 373
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES----------------RLL- 415
HY C++DLLGRAG LEEA FI ++PI P ++W S R+
Sbjct: 374 KHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFE 433
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L+ +V L+NL A WD +RK+M DKG PGCS IE+ NVV+ F + D
Sbjct: 434 LDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDG 493
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ + + LD LV ++K GYVP+
Sbjct: 494 VHSTSTILHHALDELVKELKLAGYVPD 520
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 141/279 (50%), Gaps = 7/279 (2%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
H+ + L+ +S + + + C S R ++ Q I+T N V + LI +
Sbjct: 24 HEPNTAALEPPSSSILSLIPKCTSLRELKQ---IQAYTIKT-HQNNPTVLTKLINFCTSN 79
Query: 184 RVIID---AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
I A+++F+++P ++V + + +A+ + L + S L P+D+TF+
Sbjct: 80 PTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFS 139
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S+L AC AL +G+ HC +++G + V +LI+MY C +V+ A VF+ +
Sbjct: 140 SLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEP 199
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
+V++N++I A++ A+ LF E+ + +KP +T L +SSC G ++ G+
Sbjct: 200 CVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIH 259
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + K+G + + ++D+ + G L++A K MP
Sbjct: 260 EYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMP 298
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 235/411 (57%), Gaps = 25/411 (6%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSC--GSTRNIRGGA---PYQCLAIRTGFIANVY 171
E+ ++ D+ R R+ VD+ + + +C ST ++ A A+R G+ + +
Sbjct: 162 EEALARLADMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTH 221
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RN 229
V ++LI Y+K ++ A VF MP RNVVSWTA+I +A+ + + L++ M +
Sbjct: 222 VATTLIDCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASD 281
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
L PN T IL A G ALGQG+ H +R GF S + V N+L++MY KCG +E
Sbjct: 282 EDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEA 341
Query: 290 AVYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
++F+ + H KD+VSWN++I+GY HG A+ +FE+M + V P+ ITF+ V+ +C
Sbjct: 342 GRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACS 401
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW- 407
H GLV+EGK F+SM + + P +HY+C+VDLLGRAG L+EA + I+ M I P+ +W
Sbjct: 402 HAGLVDEGKRLFESMVDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWG 461
Query: 408 ---------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKG 451
E A S+L LEP A +V LA++YA + + ++ L+++
Sbjct: 462 SLLGACRIHRHVEYAEMACSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEEHA 521
Query: 452 LKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
L+ PGCSWIE+ ++ F + D N ++ E+ ++ V QMK GYVP+
Sbjct: 522 LEKVPGCSWIEVKKRLHMFVSVDNKNPQIEELQALIGEFVTQMKNDGYVPD 572
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 7/249 (2%)
Query: 166 FIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
F ++ ++ + LI Y+ + A +VF+E PV+++ W A++ A A + L
Sbjct: 110 FRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLA 169
Query: 226 MMRNSMLEPNDFTFTSILSACTGSG-----ALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
M + + +++ L AC + A R H +R G+ + VA +LI
Sbjct: 170 DMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDC 229
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK--QRVKPDAI 338
Y K G V A VF M +++VSW +MI YA++ AI LF+EM+ + + P+++
Sbjct: 230 YAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSV 289
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
T + ++ + + +GK+ + + G + + ++ + + G LE R +
Sbjct: 290 TIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLI 349
Query: 399 PIYPNAVIW 407
+ V W
Sbjct: 350 GHRKDVVSW 358
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 241/423 (56%), Gaps = 26/423 (6%)
Query: 102 SNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGG-APYQCL 160
S+V + D+ ++++ +LI H + ++ L D +S + G + ++ G + +
Sbjct: 256 SSVLPSVGDSEMLNMGRLI--HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 161 AIRTGFIANVYV-GSSLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVD 218
+ + N Y+ G S L K ++ +++F+E + NVVSWT+IIA AQ +
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKA---LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
LEL+R M+ + ++PN T S+L AC ALG GRS H +R+ + V ++LI
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY KCG + + VFN M K++V WNS++ G++ HG A + +FE +M+ R+KPD I
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
+F ++S+C GL +EG YF M+ ++G+KP L+HYSC+V+LLGRAG L+EA D IK+
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 398 MPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQA 440
MP P++ +W AAE LEPE T+V L+N+YA W +
Sbjct: 551 MPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEV 610
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
+R M+ GLK NPGCSWI++ N VY A DKS+ ++ +I +D + +M+ G+
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHR 670
Query: 501 PEV 503
P +
Sbjct: 671 PNL 673
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 35/272 (12%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D+ L C + G C++ +G + +V S+ +Y +C + DA KVF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-------------------- 233
+ M ++VV+ +A++ A+A++ ++ + + M +S +E
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 234 ---------------PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
P+ T +S+L + S L GR H I+ G V +++I
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY K G+V + +FN + N+ I G +++GL +A+++FE +Q ++ + +
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
++ +I+ C G E F M G+KP
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+++G + Y+ + LI YS DA V + +P + S++++I A + +
Sbjct: 42 LKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSI 101
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
++ M + L P+ ++ C A G+ HC + G V S+ MY
Sbjct: 102 GVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMY 161
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+CG + +A VF+ M KD+V+ ++++ YA+ G + + EM ++ + +++
Sbjct: 162 MRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWN 221
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G++S G +E V F + G P+ S V+ +G + +L R
Sbjct: 222 GILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 218/390 (55%), Gaps = 25/390 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ ++ C + I G IR G + ++ V +S++ +YSKC + A VF+ +
Sbjct: 273 FAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLS 332
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+++SW+ +I+ +AQ + + MR PN+F F S+LS C L QG+
Sbjct: 333 RRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQ 392
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + +G V ++LI+MY KCG+++EA +F+ +IVSW +MI GYA+HG
Sbjct: 393 LHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGY 452
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
+ AIDLF+++ K ++PD++TF+ V+++C H GLV+ G YF+S++K H + P DHY
Sbjct: 453 SQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYG 512
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C++DLL RAG L +A I+ MP + V+W AAE L L+P
Sbjct: 513 CMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPN 572
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
CA TH+ LAN+YA W +AA VRK+MK KG+ PG SWI+ + V F + D+S+
Sbjct: 573 CAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPE 632
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
I VLD L Q E+H +++D
Sbjct: 633 GEYIYDVLDLLASQ-------AEMHMQEMD 655
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 152/285 (53%), Gaps = 1/285 (0%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
D+ +++ D S+A+ +C + + G C ++ GF A +V ++L T+Y+KC
Sbjct: 159 DMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCG 218
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ ++FE M R+VVSWT II + Q Q + ++ +R MR + + PN+FTF +++S
Sbjct: 219 KLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVIS 278
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
C G + G H IR G + VANS+++MY KC ++ A VF + +DI+S
Sbjct: 279 GCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIIS 338
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W++MI+GYAQ G A D M ++ +P+ F V+S C + ++E+GK +
Sbjct: 339 WSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVL 398
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GL+ S ++++ + G ++EA + Y N V W A
Sbjct: 399 CVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAE-YNNIVSWTA 442
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 133/242 (54%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L +D LS A+ +CG ++ G +++T F+ +V+VGS+L+ +Y K + +
Sbjct: 64 LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VF+EMP+RNVVSWTAIIA + L + M + + +TF+S L AC SG
Sbjct: 124 IVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL GR HCQT++ GF + VAN+L +MY KCG ++ + +F +M +D+VSW ++I
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIM 243
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
Q G A+ F M + V P+ TF VIS C G +E G+ + + GL
Sbjct: 244 SNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVD 303
Query: 371 EL 372
L
Sbjct: 304 SL 305
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE + + ++ ++ CG+ + G + G N V S+LI +YSKC
Sbjct: 362 MRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGS 421
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I +A K+F+E N+VSWTA+I +A+ ++L++ + L P+ TF ++L+A
Sbjct: 422 IKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAA 481
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVA------------NSLISMYCKCGNVEEAVYV 293
C+ H + +GF + ++ +I + C+ G + +A +
Sbjct: 482 CS-----------HAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESM 530
Query: 294 FNNM-HGKDIVSWNSMIAGYAQHG 316
+M +D V W++++ HG
Sbjct: 531 IQSMPFQRDDVVWSTLLRACRIHG 554
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-M 329
+Q N ++ K G++ A +F+ M +D +SW ++I+GY A+ LF +M +
Sbjct: 1 MQEINLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWV 60
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
+ + D + +C V G+ K + S +VD+ + G ++
Sbjct: 61 EPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVD 120
Query: 390 EARDFIKQMPIYPNAVIWEA 409
E K+MP+ N V W A
Sbjct: 121 EGCIVFKEMPL-RNVVSWTA 139
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 223/383 (58%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+++A+ +C S ++R G L ++G A++ G+SL+++Y+K +I A +F+EM
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
V++ VS++A+++ + Q + + +++ M+ +EP+ T S++ AC+ AL GR
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+H I G S + N+LI MY KCG ++ + VFN M +DIVSWN+MIAGY HGL
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A LF EM PD +TF+ ++S+C H GLV EGK +F M +GL P ++HY
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 582
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------------AESRLLLE--PE 419
C+VDLL R G L+EA +FI+ MP+ + +W A SR++ E PE
Sbjct: 583 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 642
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
V L+N+Y+ +D+AA VR + K +G K +PGCSWIEI ++ F D+S+ +
Sbjct: 643 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 702
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
EI LD ++ +K LGY P+
Sbjct: 703 SPEIYRELDNILVGIKKLGYQPD 725
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 13/295 (4%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN------ 169
V L+SM +HR L+ +AS L + + G IR N
Sbjct: 211 VAHLLSMQMQMHR--LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSK 268
Query: 170 ----VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
V +G++L+ +Y+KC ++ A +VF+ MP RN V+W+A+I F ++ L++
Sbjct: 269 LTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFK 328
Query: 226 -MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M+ + + + S L AC L G H + G + + NSL+SMY K
Sbjct: 329 AMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKA 388
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G +++A+ +F+ M KD VS++++++GY Q+G A A +F++M V+PDA T + +I
Sbjct: 389 GLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 448
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+C H ++ G+ S+ GL E + ++D+ + G ++ +R MP
Sbjct: 449 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 503
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R R+ + A+ +C + + G AI G A+++V ++L+ +Y KC +
Sbjct: 118 RHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP 177
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE--LYRMMRNSMLEPNDFTFTSILSA 245
DA +F MP R++V+W A++A +A + L M+ L PN T ++L
Sbjct: 178 DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 237
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSY----------IQVANSLISMYCKCGNVEEAVYVFN 295
GAL QG S H IR + + +L+ MY KCG++ A VF+
Sbjct: 238 LAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 297
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR---VKPDAITFLGVISSCRHGGL 352
M ++ V+W+++I G+ +A LF+ M+ Q + P +I + +C
Sbjct: 298 AMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDH 355
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ G+ +AK G+ +L + ++ + +AGL+++A +M +
Sbjct: 356 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 15/235 (6%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC--LELYRMMRNSMLEPNDFTFTSILSAC 246
A+ +F+++P +V ++ +I A++ L LYR M + PN++TF L AC
Sbjct: 76 AHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKAC 135
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ GR+ H I G + + V+ +L+ MY KC + +A ++F M +D+V+WN
Sbjct: 136 SALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWN 195
Query: 307 SMIAGYAQHGLAVRAID--LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
+M+AGYA HG+ A+ L +M R++P+A T + ++ G + +G
Sbjct: 196 AMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCI 255
Query: 365 KHGLKPELDHYS----------CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ L P + S ++D+ + G L AR MP N V W A
Sbjct: 256 RACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWSA 309
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
DA+ + + + +C ++ G I G + + ++LI +Y+KC I + +VF
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 499
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
MP R++VSW +IA + L+ M N P+ TF +LSAC+ SG +
Sbjct: 500 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 559
Query: 254 QGRS-AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAG 311
+G+ H G ++ ++ + + G ++EA +M + D+ W +++
Sbjct: 560 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 224/425 (52%), Gaps = 79/425 (18%)
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ--- 213
Y C+ + G +V++G+ L+ +YSK + A +VF++MP R+VV+W A+IA +Q
Sbjct: 137 YYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 196
Query: 214 -----------------EWQVDMC-----------LELYRMM------------------ 227
W M LEL+ M
Sbjct: 197 PYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNG 256
Query: 228 ------------RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
R PN TF S+L A A +G + H I+MGF S V N
Sbjct: 257 HAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGN 316
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
SLI MY KCG ++ + +FN M KD VSWN+M++GYA HG RAI LF M + +V+
Sbjct: 317 SLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQI 376
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
D+++F+ V+S+CRH GLVEEG+ F SM+ K+ +KP+L+HY+C+VDLLGRAGL +E F
Sbjct: 377 DSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGF 436
Query: 395 IKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCW 437
IK MP+ P+A +W E A L+ LEP A V L+++YA W
Sbjct: 437 IKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRW 496
Query: 438 DQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
A + R M D GLK PGCSW+E+ N V+ FR DKS+ +L + + + L+++M+ +
Sbjct: 497 ADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKI 556
Query: 498 GYVPE 502
GYVP+
Sbjct: 557 GYVPD 561
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 39/266 (14%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLE 233
+L +L+ KC + A VF+ P + + W ++I A+ + Q + LE+Y M+ LE
Sbjct: 91 NLYSLFHKCDL---ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLE 147
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ F ++ + G L + R + + ++ N++I+ + + A V
Sbjct: 148 RDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAW----NAMIAGLSQSEDPYVARRV 203
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV-------------------- 333
F+ M +D VSW +M+AGYA +G V ++LF++M V
Sbjct: 204 FDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAIS 263
Query: 334 ----------KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
P+++TF+ V+ + + EG + + + G + ++D+
Sbjct: 264 SFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYA 323
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G L+ + +M + + V W A
Sbjct: 324 KCGQLDYSEKLFNEMD-HKDTVSWNA 348
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 264/524 (50%), Gaps = 59/524 (11%)
Query: 36 LKQISSSKSLHKALRVLDIISPRTRDSTKTEVHL-RLIQDFLQTDSKHLDSQKFNHDFTG 94
LKQ S+ K LH+ + +R + + L R I+ H F H
Sbjct: 48 LKQCSNLKHLHQTHCFM-----LSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHK--- 99
Query: 95 TNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGG 154
T N + L P + E ++ +++ + L+ D L + + I G
Sbjct: 100 TRPDIYLYNTIIKALSNPELATEAIL-LYNRILASDLRFDTYSLPFVLKAVVRLLAIHVG 158
Query: 155 APYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF--------------------- 193
C AI TG +++++V ++LI +YS C + +A ++F
Sbjct: 159 RQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKV 218
Query: 194 ----------EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
E MP RNV+SWTA+IA +AQ + + + ++R M+ +EP++ + L
Sbjct: 219 GDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAAL 278
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
SAC GAL G H + G + + N+LI MY KCG +E+A+ VF NM K ++
Sbjct: 279 SACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVI 338
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+W SMI G A HGL A+++F M + R+KP+ ITF+ ++S+C H GLVE G+ YF M
Sbjct: 339 TWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCM 398
Query: 364 A-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------------- 407
K+G+KP++ HY C++DLLGRAG L+EA++ ++ MP NA IW
Sbjct: 399 GTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAEL 458
Query: 408 --EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
+A + + +EP + + L+N+YA W++A VRK+M+D G+K PG S IE+ N
Sbjct: 459 GKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNN 518
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
V+ F A DK + + I VL J Q K YV + H E ++
Sbjct: 519 RVHEFVAGDKLHPQSERIFEVLCKJNLQSKIAMYVQKEHVEMLE 562
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 241/423 (56%), Gaps = 26/423 (6%)
Query: 102 SNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGG-APYQCL 160
S+V + D+ ++++ +LI H + ++ L D +S + G + ++ G + +
Sbjct: 256 SSVLPSVGDSEMLNMGRLI--HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 161 AIRTGFIANVYV-GSSLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVD 218
+ + N Y+ G S L K ++ +++F+E + NVVSWT+IIA AQ +
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKA---LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
LEL+R M+ + ++PN T S+L AC ALG GRS H +R+ + V ++LI
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY KCG + + VFN M K++V WNS++ G++ HG A + +FE +M+ R+KPD I
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
+F ++S+C GL +EG YF M+ ++G+KP L+HYSC+V+LLGRAG L+EA D IK+
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 398 MPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQA 440
MP P++ +W AAE LEPE T+V L+N+YA W +
Sbjct: 551 MPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEV 610
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
+R M+ GLK NPGCSWI++ N VY A DKS+ ++ +I +D + +M+ G+
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHR 670
Query: 501 PEV 503
P +
Sbjct: 671 PNL 673
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 35/272 (12%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D+ L C + G C++ +G + +V S+ +Y +C + DA KVF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-------------------- 233
+ M ++VV+ +A++ A+A++ ++ + + M +S +E
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 234 ---------------PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
P+ T +S+L + S L GR H I+ G V +++I
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY K G+V + +FN + N+ I G +++GL +A+++FE +Q ++ + +
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
++ +I+ C G E F M G+KP
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+++G + Y+ + LI YS DA V + +P + S++++I A + +
Sbjct: 42 LKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSI 101
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
++ M + L P+ ++ C A G+ HC + G V S+ MY
Sbjct: 102 GVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMY 161
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+CG + +A VF+ M KD+V+ ++++ YA+ G + + EM ++ + +++
Sbjct: 162 MRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWN 221
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G++S G +E V F + G P+ S V+ +G + +L R
Sbjct: 222 GILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 231/407 (56%), Gaps = 18/407 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D +K + + +H+ K D L+TA +CG + G AI+ GF ++++V S
Sbjct: 1087 DGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNS 1146
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++ +Y KC +++A VF + + V+WT++I+ D L +Y MR S + P
Sbjct: 1147 GILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMP 1206
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+++TF +++ A + AL QGR H I++ S V SL+ MY KCGN+E+A +F
Sbjct: 1207 DEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLF 1266
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M+ ++I WN+M+ G AQHG A A++LF+ M ++PD ++F+G++S+C H GL
Sbjct: 1267 KKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTS 1326
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---- 409
E Y SM +G++PE++HYSC+VD LGRAGL++EA I+ MP +A I A
Sbjct: 1327 EAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGA 1386
Query: 410 ------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
+RL LEP +A +V L+N+YA WD RK+MK K +K +P
Sbjct: 1387 CRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDP 1446
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
G SWI++ N+++ F +D+S+ + I ++ ++ ++ GYVP+
Sbjct: 1447 GFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDT 1493
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 10/241 (4%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
L TA+ ST N+ G + +G + ++ ++L+T+YSKC + A +VF+
Sbjct: 627 LLRTAI----STHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTT 682
Query: 197 PVRNVVSWTAIIAAFA-----QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
P R++V+W AI+ A+A + L L+R++R S+ T +L C SG
Sbjct: 683 PERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 742
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L H I++G + V+ +L+++Y KCG + +A +F+ M +D+V WN M+ G
Sbjct: 743 LWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKG 802
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Y Q GL A LF E + ++PD + +++ +EGK D + + K
Sbjct: 803 YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNW-DEGKWLADQVQAYAAKLS 861
Query: 372 L 372
L
Sbjct: 862 L 862
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 145/294 (49%), Gaps = 2/294 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGS-TRNIRGGAPYQCLAIRTGFIANVYVGSS 175
E+ +++ DL E LK D L++ + +C S + A++TG IA+ +V ++
Sbjct: 987 EESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATT 1046
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +YSK + +A +F+ ++ W A++ + LEL+ ++ S + +
Sbjct: 1047 LIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSD 1106
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T + AC L QG+ H I+ GF S + V + ++ MY KCG++ A VFN
Sbjct: 1107 QITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 1166
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ D V+W SMI+G +G +A+ ++ M + RV PD TF +I + +E+
Sbjct: 1167 YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQ 1226
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ ++ K + + +VD+ + G +E+A K+M + N +W A
Sbjct: 1227 GRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNA 1279
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 135/278 (48%), Gaps = 2/278 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+ DA L + + T ++ G +A+++G ++V V +SL+ +YSK A
Sbjct: 900 IDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAR 959
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG-S 249
+VF +M +++SW ++I++ AQ + + L+ + + L+P+ FT S+L AC+
Sbjct: 960 EVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLI 1019
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
L R H ++ G + VA +LI +Y K G +EEA ++F N D+ WN+M+
Sbjct: 1020 DGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMM 1079
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
GY +A++LF + K K D IT +C L+++GK K G
Sbjct: 1080 FGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFD 1139
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+L S ++D+ + G + A + P+ V W
Sbjct: 1140 SDLHVNSGILDMYIKCGDMVNAGIVFNYISA-PDDVAW 1176
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+E + M ++ + T +L+A G+ L G+ H ++ G S + VANSL++
Sbjct: 888 AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVN 947
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY K G A VFN+M D++SWNSMI+ AQ L +++LF +++ + +KPD T
Sbjct: 948 MYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFT 1007
Query: 340 FLGVISSCRH--GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
V+ +C GL +++ ++ K G + + ++D+ ++G +EEA +F+ Q
Sbjct: 1008 LASVLRACSSLIDGLNISRQIHVHAL-KTGNIADSFVATTLIDVYSKSGKMEEA-EFLFQ 1065
Query: 398 MPIYPNAVIWEA 409
+ W A
Sbjct: 1066 NKDDLDLACWNA 1077
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA- 313
G+ H + + G ++N+L++MY KCG++ A VF+ +D+V+WN+++ YA
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 314 ----QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
G A + LF + +T V+ C + G + + K GL+
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759
Query: 370 PELDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYPNAVIW 407
++ +V++ + G + +AR D++++ + V+W
Sbjct: 760 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDV----VLW 796
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/449 (33%), Positives = 247/449 (55%), Gaps = 32/449 (7%)
Query: 85 SQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERL 131
+ K H + +NS + N+FD++ + LI ++H + L
Sbjct: 85 ATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGL 144
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
+ D L + +C + I G I++G+ +++VG++LI +Y+KC ++DA +
Sbjct: 145 RPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGR 204
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+++ VR+ V W +++AA+AQ D + L R M + + P + T +++S+
Sbjct: 205 VFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVAC 264
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L GR H R GF S +V +LI MY KCG+V+ A+ +F + K +VSWN++I G
Sbjct: 265 LPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITG 324
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKP 370
YA HGLAV A+DLF++M K+ +PD ITF+GV+++C G L++EG+ ++ M + +G+ P
Sbjct: 325 YAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITP 383
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
+ HY+C++DLLG G L+EA D I+ M + P++ +W A E
Sbjct: 384 TVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKL 443
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
+ LEP+ + +V LAN+YA W+ ++R++M DK +K N CSWIE+ N VY F A
Sbjct: 444 IELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAG 503
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
D S++ I L L M GY P+
Sbjct: 504 DVSHSNSDAIYAELKRLEGLMHEAGYAPD 532
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 130/260 (50%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ + SC ++ + G G N + + L+ LY+ +++A +F+++P
Sbjct: 51 TSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPK 110
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+N+ W +I +A D + LY M + L P++FT +L AC+ A+G+GRS
Sbjct: 111 QNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSI 170
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H I+ G+ + V +LI MY KCG V +A VF+ + +D V WNSM+A YAQ+G
Sbjct: 171 HEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHP 230
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+I L EM V+P T + VISS + G+ +HG + + +
Sbjct: 231 DESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTAL 290
Query: 379 VDLLGRAGLLEEARDFIKQM 398
+D+ + G ++ A +++
Sbjct: 291 IDMYAKCGSVKVALALFERL 310
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+ +TS+L +C S AL G+ H Q +G +A L+ +Y ++ A +F+
Sbjct: 48 YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDK 107
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ +++ WN +I GYA +G AI L+ +M+ ++PD T V+ +C + EG
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + + K G + +L + ++D+ + G + +A ++ + +AV+W +
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKI-VVRDAVLWNS 219
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 228/403 (56%), Gaps = 53/403 (13%)
Query: 154 GAPYQCLAIRTGFIA-NVYVGSSLITLYSKCRVIIDAYKVFEEM---------------- 196
G L +RTG +A + +V +SL+ LY CR + DA VF EM
Sbjct: 97 GPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGYV 156
Query: 197 ---------------PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
P RNVVSWT +I +AQ + + +E++R M+ +EP+ S
Sbjct: 157 KAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLS 216
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+LSAC GA+ G H +R G I + NS+I MY KCG +E+AV VF M K
Sbjct: 217 VLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKS 276
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+V+W ++IAG+A HGL ++A+++F M ++ + P+ +TFL ++S+C H GL + G+ YF+
Sbjct: 277 VVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFN 336
Query: 362 SM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--AESR----- 413
M +++ +KP+++HY C+VDLLGRAG L+EA+D +K MP+ NA IW A A SR
Sbjct: 337 IMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDA 396
Query: 414 ----------LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
+ LEP + ++ L+N++A WD +++RK MK++GL+ PG S IE+
Sbjct: 397 DLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGASSIEV 456
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV---PEV 503
+V+ F + D S+ L +I VL + MK++G+ PEV
Sbjct: 457 DGMVHEFTSRDGSHPFLHKICEVLCEINTNMKSVGFASVFPEV 499
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 6/215 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + E ++ D L + +++CG + G +R G + + +S+
Sbjct: 193 EEAVEVFRRMQVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSI 252
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y KC I A +VFE M ++VV+WT +IA FA +E++R M + PND
Sbjct: 253 IDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPND 312
Query: 237 FTFTSILSACTGSGALGQGR-SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF +ILSAC+ G GR + + ++ ++ + + G ++EA +
Sbjct: 313 VTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVK 372
Query: 296 NMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+M K + W +++A HG A DL EE +
Sbjct: 373 DMPLKANAAIWGALLAASRTHGDA----DLGEEAL 403
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 223/383 (58%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+++A+ +C S ++R G L ++G A++ G+SL+++Y+K +I A +F+EM
Sbjct: 228 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 287
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
V++ VS++A+++ + Q + + +++ M+ +EP+ T S++ AC+ AL GR
Sbjct: 288 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 347
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+H I G S + N+LI MY KCG ++ + VFN M +DIVSWN+MIAGY HGL
Sbjct: 348 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 407
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A LF EM PD +TF+ ++S+C H GLV EGK +F M +GL P ++HY
Sbjct: 408 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 467
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------------AESRLL--LEPE 419
C+VDLL R G L+EA +FI+ MP+ + +W A SR++ L PE
Sbjct: 468 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 527
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
V L+N+Y+ +D+AA VR + K +G K +PGCSWIEI ++ F D+S+ +
Sbjct: 528 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 587
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
EI LD ++ +K LGY P+
Sbjct: 588 SPEIYRELDNILVGIKKLGYQPD 610
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 13/295 (4%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN------ 169
V L+SM +HR L+ +AS L + + G IR N
Sbjct: 96 VAHLLSMQMQMHR--LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSK 153
Query: 170 ----VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
V +G++L+ +Y+KC ++ A +VF+ MP RN V+W+A+I F ++ L++
Sbjct: 154 LTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFK 213
Query: 226 -MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M+ + + + S L AC L G H + G + + NSL+SMY K
Sbjct: 214 AMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKA 273
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G +++A+ +F+ M KD VS++++++GY Q+G A A +F++M V+PDA T + +I
Sbjct: 274 GLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 333
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+C H ++ G+ S+ GL E + ++D+ + G ++ +R MP
Sbjct: 334 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 388
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R R+ + A+ +C + + G AI G A+++V ++L+ +Y KC +
Sbjct: 3 RHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP 62
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM--LEPNDFTFTSILSA 245
DA +F MP R++V+W A++A +A + M+ M L PN T ++L
Sbjct: 63 DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 122
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSY----------IQVANSLISMYCKCGNVEEAVYVFN 295
GAL QG S H IR + + +L+ MY KCG++ A VF+
Sbjct: 123 LAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 182
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR---VKPDAITFLGVISSCRHGGL 352
M ++ V+W+++I G+ +A LF+ M+ Q + P +I + +C
Sbjct: 183 AMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDH 240
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ G+ +AK G+ +L + ++ + +AGL+++A +M +
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+R+ + PN++TF L AC+ GR+ H I G + + V+ +L+ MY KC
Sbjct: 1 MLRHR-VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCA 59
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID--LFEEMMKQRVKPDAITFLGV 343
+ +A ++F M +D+V+WN+M+AGYA HG+ A+ L +M R++P+A T + +
Sbjct: 60 CLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS----------CVVDLLGRAGLLEEARD 393
+ G + +G + L P + S ++D+ + G L AR
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 394 FIKQMPIYPNAVIWEA 409
MP N V W A
Sbjct: 180 VFDAMPAR-NEVTWSA 194
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
DA+ + + + +C ++ G I G + + ++LI +Y+KC I + +VF
Sbjct: 325 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 384
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
MP R++VSW +IA + L+ M N P+ TF +LSAC+ SG +
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 444
Query: 254 QGRS-AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAG 311
+G+ H G ++ ++ + + G ++EA +M + D+ W +++
Sbjct: 445 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504
Query: 312 YAQHGLAVRAIDLFEEM--MKQRVKPDA 337
+ + IDL +++ M Q + P+
Sbjct: 505 CRVY----KNIDLGKKVSRMIQELGPEG 528
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 223/383 (58%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+++A+ +C S ++R G L ++G A++ G+SL+++Y+K +I A +F+EM
Sbjct: 228 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 287
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
V++ VS++A+++ + Q + + +++ M+ +EP+ T S++ AC+ AL GR
Sbjct: 288 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 347
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+H I G S + N+LI MY KCG ++ + VFN M +DIVSWN+MIAGY HGL
Sbjct: 348 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 407
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A LF EM PD +TF+ ++S+C H GLV EGK +F M +GL P ++HY
Sbjct: 408 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 467
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------------AESRLL--LEPE 419
C+VDLL R G L+EA +FI+ MP+ + +W A SR++ L PE
Sbjct: 468 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 527
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
V L+N+Y+ +D+AA VR + K +G K +PGCSWIEI ++ F D+S+ +
Sbjct: 528 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 587
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
EI LD ++ +K LGY P+
Sbjct: 588 SPEIYRELDNILVGIKKLGYQPD 610
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 13/295 (4%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN------ 169
V L+SM +HR L+ +AS L + + G IR N
Sbjct: 96 VAHLLSMQMQMHR--LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSK 153
Query: 170 ----VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
V +G++L+ +Y+KC ++ A +VF+ MP RN V+W+A+I F ++ L++
Sbjct: 154 LTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFK 213
Query: 226 -MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M+ + + + S L AC L G H + G + + NSL+SMY K
Sbjct: 214 AMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKA 273
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G +++A+ +F+ M KD VS++++++GY Q+G A A +F++M V+PDA T + +I
Sbjct: 274 GLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 333
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+C H ++ G+ S+ GL E + ++D+ + G ++ +R MP
Sbjct: 334 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 388
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R R+ + A+ +C + + G AI G A+++V ++L+ +Y KC +
Sbjct: 3 RHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP 62
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM--LEPNDFTFTSILSA 245
DA +F MP R++V+W A++A +A + M+ M L PN T ++L
Sbjct: 63 DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 122
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSY----------IQVANSLISMYCKCGNVEEAVYVFN 295
GAL QG S H IR + + +L+ MY KCG++ A VF+
Sbjct: 123 LAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 182
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR---VKPDAITFLGVISSCRHGGL 352
M ++ V+W+++I G+ +A LF+ M+ Q + P +I + +C
Sbjct: 183 AMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDH 240
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ G+ +AK G+ +L + ++ + +AGL+++A +M +
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+R+ + PN++TF L AC+ GR+ H I G + + V+ +L+ MY KC
Sbjct: 1 MLRHR-VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCA 59
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID--LFEEMMKQRVKPDAITFLGV 343
+ +A ++F M +D+V+WN+M+AGYA HG+ A+ L +M R++P+A T + +
Sbjct: 60 CLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS----------CVVDLLGRAGLLEEARD 393
+ G + +G + L P + S ++D+ + G L AR
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 394 FIKQMPIYPNAVIWEA 409
MP N V W A
Sbjct: 180 VFDAMPAR-NEVTWSA 194
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
DA+ + + + +C ++ G I G + + ++LI +Y+KC I + +VF
Sbjct: 325 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 384
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
MP R++VSW +IA + L+ M N P+ TF +LSAC+ SG +
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 444
Query: 254 QGRS-AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAG 311
+G+ H G ++ ++ + + G ++EA +M + D+ W +++
Sbjct: 445 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504
Query: 312 YAQHGLAVRAIDLFEEM--MKQRVKPDA 337
+ + IDL +++ M Q + P+
Sbjct: 505 CRVY----KNIDLGKKVSRMIQELGPEG 528
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 231/406 (56%), Gaps = 18/406 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D +K + + +H+ K D L+TA +CG + G AI+ GF ++++V S
Sbjct: 10 DGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNS 69
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++ +Y KC +++A VF + + V+WT++I+ D L +Y MR S + P
Sbjct: 70 GILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMP 129
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+++TF +++ A + AL QGR H I++ S V SL+ MY KCGN+E+A +F
Sbjct: 130 DEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLF 189
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M+ ++I WN+M+ G AQHG A A++LF+ M ++PD ++F+G++S+C H GL
Sbjct: 190 KKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTS 249
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---- 409
E Y SM +G++PE++HYSC+VD LGRAGL++EA I+ MP +A I A
Sbjct: 250 EAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGA 309
Query: 410 ------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
+RL LEP +A +V L+N+YA WD RK+MK K +K +P
Sbjct: 310 CRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDP 369
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
G SWI++ N+++ F +D+S+ + I ++ ++ ++ GYVP+
Sbjct: 370 GFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPD 415
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 277/544 (50%), Gaps = 60/544 (11%)
Query: 12 KKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDI--ISPRTR--------- 60
+KP L + L R + S + ++ ++ + L +LD ++P R
Sbjct: 2 RKPHKLLPNYLLLYRHTRPYTSTAANPVPAASAVLRDLDLLDAGELAPTPRVYHTFITAC 61
Query: 61 -------DSTKTEVHL---RLIQD-FLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLL 109
D+ K HL R D FL HL + S + VFD++
Sbjct: 62 AQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHL--------YCKCGSVLEARKVFDEMR 113
Query: 110 DTPVVDVEKLISMH--HDLHRE-----------RLKVDASFLSTAVTSCGSTRNIRGGAP 156
+V LI+ + +D+ E R K + ++ + + G+ + G
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQ 173
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
LA++ + +VYVGS+L+ +Y++C ++ A VF+++ +N VSW A+I+ FA++
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGD 233
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
+ L + M + E FT++S+ S+ GAL QG+ H I+ N+
Sbjct: 234 GETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNT 293
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
L+ MY K G++ +A VF+ + KD+V+WN+M+ +AQ+GL A+ FEEM K + +
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLN 353
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+TFL ++++C HGGLV+EGK YF+ M ++ L+PE+DH+ VV LLGRAGLL A FI
Sbjct: 354 QVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIF 413
Query: 397 QMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQ 439
+MPI P A +W AA+ L+P+ + V L N+YA WD
Sbjct: 414 KMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDA 473
Query: 440 AARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
AARVR++MK G+K P CSW+E+ N V+ F A D ++ R EI + + +++ GY
Sbjct: 474 AARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGY 533
Query: 500 VPEV 503
VP++
Sbjct: 534 VPDM 537
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 241/430 (56%), Gaps = 31/430 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGSTRN 150
+FD L++ ++ +I + + +E K +A + + +C S
Sbjct: 186 IFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGA 245
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
++ A+ G +V VG++L+ +Y+K I DA VF+ M VR+VVSW +I A
Sbjct: 246 LKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGA 305
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
FA+ + +L+ M+ +P+ F SIL+AC +GAL + H + G
Sbjct: 306 FAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVD 365
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
++V +L+ MY K G++++A VF+ M +++VSWN+MI+G AQHGL A+++F M
Sbjct: 366 VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTA 425
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
VKPD +TF+ V+S+C H GLV+EG+ + +M + +G++P++ H +C+VDLLGRAG L
Sbjct: 426 HGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLM 485
Query: 390 EARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYA 432
EA+ FI M + P+ W A A+ RL L+P+ AAT+V L+N+YA
Sbjct: 486 EAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYA 545
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
WD + VR +M+++G++ PG SWIE+ N ++ F D S+ EI D +++
Sbjct: 546 EAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIE 605
Query: 493 QMKTLGYVPE 502
++K GY+P+
Sbjct: 606 KIKAEGYIPD 615
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 153/298 (51%), Gaps = 1/298 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + ++ E ++ +A + +C S ++ G G ++V VG++L
Sbjct: 111 EDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTAL 170
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC I +A ++F+ + +++SWT +I A+AQ L M +PN
Sbjct: 171 LRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNA 230
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T+ SIL+AC GAL + H + G ++V +L+ MY K G++++A VF+
Sbjct: 231 ITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDR 290
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D+VSWN MI +A+HG A DLF +M + KPDAI FL ++++C G +E
Sbjct: 291 MKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWV 350
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
K GL+ ++ + +V + ++G +++AR +M + N V W A S L
Sbjct: 351 KKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKV-RNVVSWNAMISGL 407
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 147/291 (50%), Gaps = 2/291 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E ++ + + L R L D+ + C +++ I++ N +V ++L
Sbjct: 11 EAIVVLMNRLQRG-LITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y +C + +A VF+ + ++ SW A+IA + + + + L+R M + ++PN
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNA 129
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T+ IL AC AL G+ H G S ++V +L+ MY KCG++ EA +F+N
Sbjct: 130 GTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDN 189
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ DI+SW MI YAQ G A L +M ++ KP+AIT++ ++++C G ++
Sbjct: 190 LMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWV 249
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K GL+ ++ + +V + ++G +++AR +M + + V W
Sbjct: 250 KRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKV-RDVVSW 299
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 223/383 (58%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+++A+ +C S ++R G L ++G A++ G+SL+++Y+K +I A +F+EM
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
V++ VS++A+++ + Q + + +++ M+ +EP+ T S++ AC+ AL GR
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+H I G S + N+LI MY KCG ++ + VFN M +DIVSWN+MIAGY HGL
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A LF EM PD +TF+ ++S+C H GLV EGK +F M +GL P ++HY
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYI 582
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------------AESRLLLE--PE 419
C+VDLL R G L+EA +FI+ MP+ + +W A SR++ E PE
Sbjct: 583 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 642
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
V L+N+Y+ +D+AA VR + K +G K +PGCSWIEI ++ F D+S+ +
Sbjct: 643 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 702
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
EI LD ++ +K LGY P+
Sbjct: 703 SPEIYRELDNILVGIKKLGYQPD 725
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 147/295 (49%), Gaps = 13/295 (4%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN------ 169
V L+SM +HR L+ +AS L + + G IR +N
Sbjct: 211 VAHLLSMQMQMHR--LRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSK 268
Query: 170 ----VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
V +G++L+ +Y+KC ++ A +VF+ MP RN V+W+A+I F ++ L++
Sbjct: 269 LTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFK 328
Query: 226 -MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M+ + + + S L AC L G H + G + + NSL+SMY K
Sbjct: 329 AMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKA 388
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G +++A+ +F+ M KD VS++++++GY Q+G A A +F++M V+PDA T + +I
Sbjct: 389 GLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLI 448
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+C H ++ G+ S+ GL E + ++D+ + G ++ +R MP
Sbjct: 449 PACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 503
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 17/288 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R R+ + A+ +C + + G AI G A+++V ++L+ +Y KC +
Sbjct: 118 RHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP 177
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE--LYRMMRNSMLEPNDFTFTSILSA 245
DA +F MP R++V+W A++A +A + L M+ L PN T ++L
Sbjct: 178 DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 237
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSY----------IQVANSLISMYCKCGNVEEAVYVFN 295
GAL QG S H IR S + + +L+ MY KCG++ A VF+
Sbjct: 238 LAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 297
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR---VKPDAITFLGVISSCRHGGL 352
M ++ V+W+++I G+ +A LF+ M+ Q + P +I + +C
Sbjct: 298 AMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDH 355
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ G+ +AK G+ +L + ++ + +AGL+++A +M +
Sbjct: 356 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 15/235 (6%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC--LELYRMMRNSMLEPNDFTFTSILSAC 246
A+ +F+++P +V ++ +I A++ L LYR M + PN++TF L AC
Sbjct: 76 AHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKAC 135
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ GR+ H I G + + V+ +L+ MY KC + +A ++F M +D+V+WN
Sbjct: 136 SALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWN 195
Query: 307 SMIAGYAQHGLAVRAID--LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK------- 357
+M+AGYA HG+ A+ L +M R++P+A T + ++ G + +G
Sbjct: 196 AMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRI 255
Query: 358 ---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + +K L + + ++D+ + G L AR MP N V W A
Sbjct: 256 RACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWSA 309
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
DA+ + + + +C ++ G I G + + ++LI +Y+KC I + +VF
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 499
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
MP R++VSW +IA + L+ M N P+ TF +LSAC+ SG +
Sbjct: 500 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 559
Query: 254 QGRS-AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAG 311
+G+ H G ++ ++ + + G ++EA +M + D+ W +++
Sbjct: 560 EGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 221/393 (56%), Gaps = 19/393 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E ++++ S AV +C S + G + GF +N+ V +S++ +Y +C +
Sbjct: 189 EEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSE 248
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A + F EM R++++W +IA + + + L ++ MM + PN FTFTSI++AC
Sbjct: 249 ANRYFYEMNQRDLITWNTLIAGYERSNPTE-SLYVFSMMESEGFSPNCFTFTSIMAACAT 307
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
L G+ H + IR G + ++N+LI MY KCGN+ ++ VF M +D+VSW +M
Sbjct: 308 LAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAM 367
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHG 367
+ GY HG A++LF++M++ ++PD + F+ ++S+C H GLV+EG YF M +
Sbjct: 368 MIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYN 427
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
+ P+ + Y CVVDLLGRAG +EEA + I+ MP P+ +W AA
Sbjct: 428 ISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAA 487
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
L L P A T+V L+N+YA W + AR+RKLMK G K G SW+E+ N VY F
Sbjct: 488 HRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSF 547
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
D+ +++ I VL+ L+ MK GYVP++
Sbjct: 548 VVGDEVGSKIEGIYQVLENLIGHMKESGYVPDL 580
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 137/275 (49%), Gaps = 2/275 (0%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ E L +A +S+ + +C + + G LAI+ G +YV ++L+ +Y+ C
Sbjct: 83 EMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCC 142
Query: 185 VIID-AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
V +D A VF + ++N VSWT +IA + L ++R M +E N F+F+ +
Sbjct: 143 VSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAV 202
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
ACT G+ G H + GF S + V NS++ MYC+C EA F M+ +D++
Sbjct: 203 RACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLI 262
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+WN++IAGY + ++ +F M + P+ TF ++++C + G+ +
Sbjct: 263 TWNTLIAGYERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRI 321
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ GL L + ++D+ + G + ++ M
Sbjct: 322 IRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGM 356
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A + + GK ++ MIAGY A +F EMM + + P+A T V+ +C+
Sbjct: 46 ATTLIKSYFGKGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKG 105
Query: 350 GGLVEEGKVYFDSMAKHGL 368
+ G++ KHGL
Sbjct: 106 MKCLSYGRLVHGLAIKHGL 124
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 264/524 (50%), Gaps = 59/524 (11%)
Query: 36 LKQISSSKSLHKALRVLDIISPRTRDSTKTEVHL-RLIQDFLQTDSKHLDSQKFNHDFTG 94
LKQ S+ K LH+ + +R + + L R I+ H F H
Sbjct: 48 LKQCSNLKHLHQTHCFM-----LSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHK--- 99
Query: 95 TNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGG 154
T N + L P + E ++ +++ + L+ D L + + I G
Sbjct: 100 TRPDIYLYNTIIKALSNPELATEAIL-LYNRILASDLRFDTYSLPFVLKAVVRLLAIHVG 158
Query: 155 APYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF--------------------- 193
C AI TG +++++V ++LI +YS C + +A ++F
Sbjct: 159 RQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKV 218
Query: 194 ----------EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
E MP RNV+SWTA+IA +AQ + + + ++R M+ +EP++ + L
Sbjct: 219 GDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAAL 278
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
SAC GAL G H + G + + N+LI MY KCG +E+A+ VF NM K ++
Sbjct: 279 SACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVI 338
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+W SMI G A HGL A+++F M + R+KP+ ITF+ ++S+C H GLVE G+ YF M
Sbjct: 339 TWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCM 398
Query: 364 A-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------------- 407
K+G+KP++ HY C++DLLGRAG L+EA++ ++ MP NA IW
Sbjct: 399 GTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAEL 458
Query: 408 --EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
+A + + +EP + + L+N+YA W++A VRK+M+D G+K PG S IE+ N
Sbjct: 459 GKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNN 518
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
V+ F A DK + + I VL + Q K YV + H E ++
Sbjct: 519 RVHEFVAGDKLHPQSERIFEVLCKINLQSKIAMYVQKEHVEMLE 562
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 153/466 (32%), Positives = 245/466 (52%), Gaps = 64/466 (13%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNI 151
+ G + FG++ +D+ + M + + D S +S + + G ++
Sbjct: 208 WNGMLAGFGNNGFYDEA-----------VGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDV 256
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF---EEMPVR--------- 199
GA I+ G ++ +V S+++ +Y KC + + +VF EEM +
Sbjct: 257 VVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGL 316
Query: 200 -----------------------NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
NVV+WT+IIA+ +Q + LEL+R M+ +EPN
Sbjct: 317 SRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNA 376
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T S++ AC AL G+ HC ++R G F + V ++LI MY KCG ++ A F+
Sbjct: 377 VTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDK 436
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M ++VSWN+++ GYA HG A +++F M++ KPD +TF V+S+C GL EEG
Sbjct: 437 MSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEG 496
Query: 357 KVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
++SM+ +HG++P+++HY+C+V LL R G LEEA IK+MP P+A +W
Sbjct: 497 WRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCR 556
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAE LEP ++ L+N+YA WD+ R+R++MK KGL+ NPG
Sbjct: 557 VHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGY 616
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
SWIE+ + V+ A D+S+ ++ +IL LD L QMK GY+P+ +
Sbjct: 617 SWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTN 662
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 138/280 (49%), Gaps = 35/280 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
LH RL DA L +A+ SC S R + G A +GF+ + V SSL +Y KC
Sbjct: 95 LHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDR 154
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I+DA K+F+ MP R+VV W+A+IA +++ V+ EL+ MR+ +EPN ++ +L+
Sbjct: 155 ILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAG 214
Query: 246 CTGSG----ALGQ-------------------------------GRSAHCQTIRMGFFSY 270
+G A+G G H I+ G S
Sbjct: 215 FGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSD 274
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V ++++ MY KCG V+E VF+ + +I S N+ + G +++G+ A+++F +
Sbjct: 275 KFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKD 334
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
Q+++ + +T+ +I+SC G E F M +G++P
Sbjct: 335 QKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEP 374
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 141 AVTSC--GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID---AYKVFEE 195
A++ C ST ++ L +R ++ + +SL++ Y+ + + +
Sbjct: 4 ALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSH 63
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+P + S++++I AFA+ L + + L P+ F S + +C AL G
Sbjct: 64 LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H GF + VA+SL MY KC + +A +F+ M +D+V W++MIAGY++
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
GL A +LF EM V+P+ +++ G+++ + G +E F M G P+
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTV 243
Query: 376 SCVVDLLG 383
SCV+ +G
Sbjct: 244 SCVLPAVG 251
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 232/411 (56%), Gaps = 33/411 (8%)
Query: 123 HHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
H L + + D + +C + G ++ GF ++VY+ +SL+ Y+
Sbjct: 116 HRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYAT 175
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
C + A VF+ M R++VSW +I AF + + D L L+ M+ EP+ +T SI
Sbjct: 176 CDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQSI 234
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
+AC G G+L +G + + + SL+ MYCKCG++E A+ +F+ M +D+
Sbjct: 235 ANACAGMGSLS-----------LGIVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDV 283
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
SWNSMI G++ HG A++ F M++ +++ P+AITF+GV+S+C HGGLV EG+ YFD
Sbjct: 284 TSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFD 343
Query: 362 SM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------- 407
M ++ +KPEL+HY C+VDLL RAGL++EA D + MP+ P+ VIW
Sbjct: 344 VMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAG 403
Query: 408 -EAAE--SRLLLEPE---CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
E +E +R +LE E C+ +V L+ +YA W+ VRKLM DKG+ PGCS I
Sbjct: 404 VELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSI 463
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDAS 512
EI V + F A D S+ + EI LD + ++++ +GY P+ + + D +
Sbjct: 464 EIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQAPMVDET 514
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW-QVDMCLELY-RM 226
N + S I +S + A++VF ++ N W A+I A A+ + + LY RM
Sbjct: 59 NTFFLYSRILHFSSLHDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRM 118
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
+ + + TF +L AC AL +G H Q +++GF S + + NSL+ Y C
Sbjct: 119 LEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDR 178
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A VF+ M + +VSWN +I + + G A++LF EM K +PD T + ++
Sbjct: 179 LDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQSIANA 237
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
C G + G V D + L VD+ + G LE A +MP
Sbjct: 238 CAGMGSLSLGIVN-DVLLNTSL----------VDMYCKCGSLELALQLFHRMP 279
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 151/467 (32%), Positives = 248/467 (53%), Gaps = 66/467 (14%)
Query: 104 VFDQLLDTPVV--------------DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTR 149
+FDQ+ D +V D+ L + L LK D L + +++C +
Sbjct: 233 LFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRE 292
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI----------------------- 186
+++ G +R VG++LI++Y+K +
Sbjct: 293 SLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSL 352
Query: 187 IDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+D Y +F+ + R+VV+WTA+I +AQ + L L+R+M +PN+
Sbjct: 353 LDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNN 412
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+T ++LS + +L G+ H IR+ S + V N+LI+MY + G++++A +FN+
Sbjct: 413 YTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNH 472
Query: 297 MHG-KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ +D ++W SMI AQHGL AI+LFE+M++ +KPD IT++GV+S+C H GLVE+
Sbjct: 473 ICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQ 532
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
GK YF+ M H ++P HY+C++DLLGRAGLLEEA +FI+ MPI P+ V W
Sbjct: 533 GKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSC 592
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AAE LL++P + ++ LAN + W+ AA+VRK MKDK +K G
Sbjct: 593 RVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQG 652
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
SW++I N V+ F ED + + I ++ + ++K +G++P+ +
Sbjct: 653 FSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTN 699
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 71/294 (24%)
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC--------- 220
V++ ++L+ LY K DA+++F+EMP++ SW I++A A+ +D
Sbjct: 48 VFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQ 107
Query: 221 ---------------LELYR-------MMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
L L++ M +S + P FTFT++L++C + AL G+
Sbjct: 108 PDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKV 167
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGN-------------------------------V 287
H +++G + VANSL++MY KCG+
Sbjct: 168 HSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQF 227
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISS 346
+ A+ +F+ M DIVSWNS+I GY G +RA++ F M+K +KPD T V+S+
Sbjct: 228 DLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSA 287
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV----VDLLGRAGLLEEARDFIK 396
C + ++ GK + H ++ ++D V + + ++G +E A ++
Sbjct: 288 CANRESLKLGK----QIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVE 337
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 142/343 (41%), Gaps = 77/343 (22%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ + SC + + + G ++ G V V +SL+ +Y+KC + A VF+ M
Sbjct: 148 FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMR 207
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYR-------------------------------- 225
+++ +W +I+ Q Q D+ L L+
Sbjct: 208 LKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSF 267
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+++S L+P+ FT S+LSAC +L G+ H +R V N+LISMY K G
Sbjct: 268 MLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSG 327
Query: 286 NVE---------------------------------EAVYVFNNMHGKDIVSWNSMIAGY 312
VE A +F+++ +D+V+W +MI GY
Sbjct: 328 AVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGY 387
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
AQ+GL A+ LF M+++ KP+ T V+S ++ GK H + L
Sbjct: 388 AQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQL------HAVAIRL 441
Query: 373 DHYSCV------VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S V + + R+G +++AR + Y + + W +
Sbjct: 442 EEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTS 484
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/437 (33%), Positives = 232/437 (53%), Gaps = 53/437 (12%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M +H D +S+ + S G + N+ G I+ G + + V S+++ +
Sbjct: 237 VIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDM 296
Query: 180 YSKCRVIIDAYKVFEEMPVR-----------------------------------NVVSW 204
Y K + K+F+E + NVVSW
Sbjct: 297 YGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSW 356
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
T+IIA AQ + LEL+R M+ + ++PN T S+L AC ALG GRS H +R
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
+ + V ++LI MY KCG ++ + VFN M K++V WNS++ GY+ HG A + +
Sbjct: 417 VHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSI 476
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLG 383
FE +M+ R+KPD I+F ++S+C GL +EG YF+ M+ ++G+KP L+HYSC+V+LLG
Sbjct: 477 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQ 426
RAG L+EA D IK++P P++ +W AA+ LEPE T+V
Sbjct: 537 RAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVL 596
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
++N+YA W + +R M+ GLK NPGCSWI++ N VY A DKS+ ++ +I
Sbjct: 597 MSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEK 656
Query: 487 LDFLVDQMKTLGYVPEV 503
+D + ++M+ G+ P +
Sbjct: 657 MDEISEEMRKSGHRPNL 673
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 162/428 (37%), Gaps = 86/428 (20%)
Query: 65 TEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLI---- 120
T+ H R+++ Q D S K ++ N + + + D V LI
Sbjct: 35 TQAHARILKSGAQNDG--YISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALT 92
Query: 121 ---------SMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVY 171
+ + L D L C + G C+A +G + +
Sbjct: 93 KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF 152
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
V SL +Y +C + DA KVF+ M ++VV+ +A++ +A++ ++ + + M S
Sbjct: 153 VQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG 212
Query: 232 LEPNDFTFTSILSACTGSG-----------------------------------ALGQGR 256
+EPN ++ ILS SG L GR
Sbjct: 213 IEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGR 272
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN--------------------- 295
H I+ G V ++++ MY K G+V + +F+
Sbjct: 273 QIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNG 332
Query: 296 ------NMHG--------KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
M G ++VSW S+IAG AQ+G + A++LF EM VKP+ +T
Sbjct: 333 LVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIP 392
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
++ +C + + G+ + L ++ S ++D+ + G ++ ++ MP
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPT- 451
Query: 402 PNAVIWEA 409
N V W +
Sbjct: 452 KNLVCWNS 459
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 229/407 (56%), Gaps = 23/407 (5%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L+ L D +F S + +C + + G CLAI+ G N YV +LI +Y+ C
Sbjct: 119 LNYNLLPDDYTFPSL-LKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCND 177
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A +VF+E+ VVS+ AII +A+ + + L L+R ++ L+PND T S+LS+
Sbjct: 178 VDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSS 237
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C GAL G+ H + G Y++V +LI MY KCG+++ A+ VF +M +D +W
Sbjct: 238 CALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAW 297
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
++MI YA HG + +FEEM + +V+PD ITFLG++ +C H GLV+EG YF SM++
Sbjct: 298 SAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSE 357
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESR----------- 413
+G+ P + HY C+VDLLGRAGLL EA FI ++PI P ++W S
Sbjct: 358 VYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAK 417
Query: 414 ------LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
L L+ +V L+NL A W+ +RKLM KG PGCS IE+ NVV
Sbjct: 418 QVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVV 477
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE----VHEEKVDD 510
+ F + D + + + LD LV ++K++GYVP+ VH + D+
Sbjct: 478 HEFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVVHPDMEDE 524
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 117/212 (55%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A+++FE +P ++V + ++ +++ + L+ N L P+D+TF S+L AC
Sbjct: 80 AHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVV 139
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ A QG+ HC I++G V +LI+MY C +V+ A VF+ + +VS+N++
Sbjct: 140 AKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAI 199
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I GYA+ A+ LF ++ +++KP+ +T L V+SSC G ++ GK + + K+GL
Sbjct: 200 ITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGL 259
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ + ++D+ + G L+ A + M +
Sbjct: 260 DKYVKVNTALIDMYAKCGSLDGAISVFESMSV 291
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 221/393 (56%), Gaps = 19/393 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E ++++ S AV +C S + G + GF +N+ V +S++ +Y +C +
Sbjct: 205 EEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSE 264
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A + F EM R++++W +IA + + + L ++ MM + PN FTFTSI++AC
Sbjct: 265 ANRYFYEMNQRDLITWNTLIAGYERSNPTE-SLYVFSMMESEGFSPNCFTFTSIMAACAT 323
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
L G+ H + IR G + ++N+LI MY KCGN+ ++ VF M +D+VSW +M
Sbjct: 324 LAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAM 383
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHG 367
+ GY HG A++LF++M++ ++PD + F+ ++S+C H GLV+EG YF M +
Sbjct: 384 MIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYN 443
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
+ P+ + Y CVVDLLGRAG +EEA + I+ MP P+ +W AA
Sbjct: 444 ISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAA 503
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
L L P A T+V L+N+YA W + AR+RKLMK G K G SW+E+ N VY F
Sbjct: 504 HRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSF 563
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
D+ +++ I VL+ L+ MK GYVP++
Sbjct: 564 VVGDEVGSKIEGIYQVLENLIGHMKESGYVPDL 596
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 137/275 (49%), Gaps = 2/275 (0%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ E L +A +S+ + +C + + G LAI+ G +YV ++L+ +Y+ C
Sbjct: 99 EMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCC 158
Query: 185 VIID-AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
V +D A VF + ++N VSWT +IA + L ++R M +E N F+F+ +
Sbjct: 159 VSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAV 218
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
ACT G+ G H + GF S + V NS++ MYC+C EA F M+ +D++
Sbjct: 219 RACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLI 278
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+WN++IAGY + ++ +F M + P+ TF ++++C + G+ +
Sbjct: 279 TWNTLIAGYERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRI 337
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ GL L + ++D+ + G + ++ M
Sbjct: 338 IRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGM 372
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 117/228 (51%), Gaps = 1/228 (0%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
+ ++LI Y +I +A +F+EMP R+VV+WT +IA + ++ M N
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG-NVEEA 290
L+PN FT +S+L AC G L GR H I+ G +I V N+L+ MY C ++++A
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDA 164
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF +H K+ VSW ++IAGY + +F +M+ + V+ + +F + +C
Sbjct: 165 CMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSI 224
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G G+ ++ KHG + L + ++D+ R EA + +M
Sbjct: 225 GSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEM 272
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 210/391 (53%), Gaps = 17/391 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + D + + +C + R G +A++ G + YV +LI +Y++C
Sbjct: 127 EGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARA 186
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A F VVS+ A+IAA + + L L+R M+ L P T S+LSAC
Sbjct: 187 ARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACAL 246
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
GAL GR H ++G S ++V+ +L+ MY KCG++E+A+ VF M +D +W+ M
Sbjct: 247 LGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVM 306
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I YA HG AI LFEEM KQ +KPD ITFLG++ +C H GLV EG YFD M HG+
Sbjct: 307 IVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGI 366
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA-----------------E 411
P + HY CV DLL R+G LE A FI ++PI P ++W E
Sbjct: 367 VPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFE 426
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
L L+ +V +NL A W++ RVRKLM DKG+ PGCS IEI N V+ F
Sbjct: 427 RILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFF 486
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
A D + + E ++D ++DQ+K +GY+P+
Sbjct: 487 AGDGRHPKSQEARKMVDEVIDQLKLVGYIPD 517
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
RM+ + P+ +TF S+L AC + A GR AH +++G + V +LI+MY +C
Sbjct: 123 RMLEEG-VAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAEC 181
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G+ A F G +VS+N+MIA + A+ LF EM + + P +T + V+
Sbjct: 182 GDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVL 241
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
S+C G ++ G+ D + K GL + + +VD+ + G LE+A + M
Sbjct: 242 SACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGM 295
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 219/387 (56%), Gaps = 19/387 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + LS + SCG ++ G +R GF ++ + ++L+ +Y KC I A +F
Sbjct: 232 DITMLSL-IISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIF 290
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ M ++V++WTA+I+A+AQ +D +L+ MR++ + PN+ T S+LS C +GAL
Sbjct: 291 DSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALD 350
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ H + G + + +LI MY KCG++ A +F+ +DI +WN M+AGY
Sbjct: 351 MGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYG 410
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPEL 372
HG +A+ LF EM VKP+ ITF+G + +C H GLV EGK F+ M GL P++
Sbjct: 411 MHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKV 470
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLL 415
+HY C+VDLLGRAGLL+EA I+ MP+ PN IW AA L
Sbjct: 471 EHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLA 530
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
LEP+ V ++N+YA W+ A +RK +KD G+K PG S IE+ +V+ F+ D
Sbjct: 531 LEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDT 590
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ + +I +L + ++K GY+P+
Sbjct: 591 AHPLIEKISEMLAEMSKKLKEAGYLPD 617
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 148/289 (51%), Gaps = 22/289 (7%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++VD+ + + + +C R G +++ G +++V+V ++L+ +YS+C ++ A
Sbjct: 105 IEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSAR 164
Query: 191 KVFEEMPVRNVVSW----------------------TAIIAAFAQEWQVDMCLELYRMMR 228
+F++M R+VVSW TA+IA + + ++ L+ M
Sbjct: 165 LLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMI 224
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ PND T S++ +C GA+ G+ H +R GF + +A +L+ MY KCG +
Sbjct: 225 EENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIR 284
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A +F++M KD+++W +MI+ YAQ A LF +M V+P+ +T + ++S C
Sbjct: 285 SARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCA 344
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
G ++ GK + + K G++ ++ + ++D+ + G + A+ +
Sbjct: 345 VNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE 393
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 40/257 (15%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L Y MR +E + F S+L AC+ G+ H +++ G S + V N+L+ M
Sbjct: 94 LNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQM 153
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ--HGLAVRAI---------------- 322
Y +CG++ A +F+ M +D+VSW++MI Y +G + R+I
Sbjct: 154 YSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDL 213
Query: 323 ----DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
LF M+++ V P+ IT L +I SC G V+ GK + ++G L + +
Sbjct: 214 EEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATAL 273
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWD 438
VD+ G+ G + AR M + + W A + + YA C D
Sbjct: 274 VDMYGKCGEIRSARAIFDSMK-NKDVMTWTA-----------------MISAYAQANCID 315
Query: 439 QAARVRKLMKDKGLKTN 455
A ++ M+D G++ N
Sbjct: 316 YAFQLFVQMRDNGVRPN 332
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 232/430 (53%), Gaps = 53/430 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H L D L + SC + G +R G + YVG+SLI +Y KC V
Sbjct: 172 MHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGV 231
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RN-------------- 229
I DA K+F++M VR++ SW A+IA + +E ++ + +L+ M RN
Sbjct: 232 IGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQN 291
Query: 230 -----------------SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
S ++PN T S+L AC S AL +GR H +G
Sbjct: 292 GFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSS 351
Query: 273 VANSLISMYCKCGNVEEAVYVFNNM--HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V +L MY KC ++ EA F+ + +GK++++WN+MI YA HG V A+ +FE M++
Sbjct: 352 VQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLR 411
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
V+PDA+TF+G++S C H GL++ G +F+ M H ++P ++HY+CVVDLLGRAG L
Sbjct: 412 AGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLV 471
Query: 390 EARDFIKQMPIYPNAVIW----------------EAAESRL-LLEPECAATHVQLANLYA 432
EA++ I QMP+ +W E A RL +LEP+ + +V L+NLYA
Sbjct: 472 EAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYA 531
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
W++ ++R L+K +G+K +PGCSWIEI + F DKS+ + EI L+ L +
Sbjct: 532 EAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPE 591
Query: 493 QMKTLGYVPE 502
++K GY+P+
Sbjct: 592 KIKMAGYIPD 601
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 17/269 (6%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC---L 221
G N ++ + ++ +Y+ + A VF+ + + + + +II A+ + L
Sbjct: 107 GLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXL 166
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
E Y M L ++FT +L +C + GR H Q +R+G V SLI MY
Sbjct: 167 EAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMY 226
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG + +A +F+ M +D+ SWN++IAGY + G A DLFE M + + +++
Sbjct: 227 VKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNI----VSWT 282
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHG--LKPELDHYSCVVDLLGRAGLLEEAR---DFIK 396
+IS G E+ FD M + G +KP V+ ++ LE R DF
Sbjct: 283 AMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFAN 342
Query: 397 QMPIYPNAVIWEA-----AESRLLLEPEC 420
+ ++ N+ + A A+ L+E C
Sbjct: 343 GIGLHLNSSVQTALAGMYAKCYSLVEARC 371
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 225 RMMRNSMLE--PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
R++ +L+ P+ ++ I T + G+ AH Q + G +A +++MY
Sbjct: 64 RILLQPILQHFPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYA 123
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQRVKPDAIT 339
G+++ AV VF+ + + +NS+I Y +HG ++ + M + D T
Sbjct: 124 SSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFT 183
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
V+ SC V G+ + GL+ + + ++D+ + G++ +AR +M
Sbjct: 184 LPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKM- 242
Query: 400 IYPNAVIWEAAESRLLLEPE 419
I + W A + + E E
Sbjct: 243 IVRDMASWNALIAGYMKEGE 262
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 227/413 (54%), Gaps = 49/413 (11%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S + +C ++ G L + GF +N+++ + ++ LY C + DA +FE+MP
Sbjct: 14 SFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQ 73
Query: 199 R-------------------------------NVVSWTAIIAAFAQEWQVDMCLELYRMM 227
R NV SWT++I+ F Q + + ++L+ +
Sbjct: 74 RDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKL 133
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ + PN+ T S+L+AC G L GR H + + GF + V N+LI MY KCG +
Sbjct: 134 EDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCL 193
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
E A VF M + +VSW++MIAG A HG A A+ LF EM+K VKP+ +TF+G++ +C
Sbjct: 194 ENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHAC 253
Query: 348 RHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
H GL++EG+ +F SM A +G+ P+++HY CVVDL RAGLLEEA +FI MPI PN V+
Sbjct: 254 SHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVV 313
Query: 407 W-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
W EA + L+P +V ++N+YA W+ AARVRKLMKD
Sbjct: 314 WGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRKLMKD 373
Query: 450 KGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+G+K G S I + VV+ F A D+++ + +I + D L+ +MK GY P+
Sbjct: 374 RGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPK 426
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 6/222 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + L E ++ + + + + +C ++ G + ++GF NV+V ++LI +
Sbjct: 127 IDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDM 186
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + +A +VF EM R VVSW+A+IA A Q + L L+ M ++PN TF
Sbjct: 187 YVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTF 246
Query: 240 TSILSACTGSGALGQGRSAHCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+L AC+ G + +GR T G I+ ++ ++ + G +EEA +M
Sbjct: 247 IGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMP 306
Query: 299 GK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
K + V W +++ G H + IDL EE +K + D +
Sbjct: 307 IKPNGVVWGALLGGCKVH----KNIDLAEEAIKHLSELDPLN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ FT + +L AC + G++ H ++GF S + + N ++++Y CG + +A+ +
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67
Query: 294 FNNMHGKDIVSWN-------------------------------SMIAGYAQHGLAVRAI 322
F M +D V+WN SMI+G+ Q G AI
Sbjct: 68 FEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAI 127
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
DLF ++ + V+P+ +T + V+++C G ++ G++ + K G K + + ++D+
Sbjct: 128 DLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMY 187
Query: 383 GRAGLLEEARDFIKQM 398
+ G LE AR +M
Sbjct: 188 VKCGCLENARRVFYEM 203
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 211/365 (57%), Gaps = 26/365 (7%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVF------EEMP-VR-NVVSWTAIIAAFAQEWQVDMC 220
N+ ++LI+ Y+ +A+ +F +E P VR NVVSW+A+I FA + Q +
Sbjct: 336 NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEA 395
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
LEL+R M+ + ++ N T S+LS C AL GR H +R I V N LI+M
Sbjct: 396 LELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINM 455
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G+ +E VF + KD++SWN+M+AGY HGL AI F++M+K +PD +TF
Sbjct: 456 YTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTF 515
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ V+S+C H GLV EG+ FD M K ++P+++HY+C+VDLLGRAGLL+EA +K MP
Sbjct: 516 VAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMP 575
Query: 400 IYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
+ PNA +W E A L E A +++ L+N+YA W+ +A+
Sbjct: 576 VEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAK 635
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VR K KGLK PG SWI++ VY F A + + L E+ +L L QM+ GY+P+
Sbjct: 636 VRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPD 695
Query: 503 VHEEK 507
+ EE+
Sbjct: 696 IDEEQ 700
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 116/241 (48%), Gaps = 39/241 (16%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ GF N++VG+ L+ +Y K + DA KVFE M VR+ VSW +++ +A +
Sbjct: 162 VEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGAS 221
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSG------------------------------- 250
E++RMM ++ LEPN T+TS+LS+ G
Sbjct: 222 EMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVS 281
Query: 251 ----ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
A +G+ H ++ GF +Y+ V NSLI +Y K GNV A +F + K+IVSWN
Sbjct: 282 VDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWN 341
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQ----RVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
++I+ YA G A +F ++ K V+P+ +++ VI G EE F
Sbjct: 342 ALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRR 401
Query: 363 M 363
M
Sbjct: 402 M 402
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR---NVVSWTAIIAAFAQEWQVD 218
I TG + ++ + ++++Y+ ++ DA +VFE P+ N++ W +I+ A +
Sbjct: 58 IVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCE 117
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
LE+Y MR + + FTF ++ AC G+ RS H + MGF + V N L+
Sbjct: 118 EALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELM 177
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY K G +++A VF M + VSWN+M++GYA + A ++F M ++P+ +
Sbjct: 178 GMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLV 237
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
T+ ++SS G E F M G+ + + V+ +
Sbjct: 238 TWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSV 280
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 73/148 (49%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + ++K ++ +++ ++ C + G +R+ N+ VG+ L
Sbjct: 393 EEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGL 452
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+K + VFE++ ++++SW ++A + + + + M EP+
Sbjct: 453 INMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDG 512
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIR 264
TF ++LSAC+ +G + +GR + I+
Sbjct: 513 VTFVAVLSACSHAGLVAEGRELFDKMIK 540
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 160/453 (35%), Positives = 242/453 (53%), Gaps = 37/453 (8%)
Query: 92 FTGTNSTFGSSNVFDQL--LDTPVVDVEKLISMHHDLHRERLKV--------------DA 135
F+ + + VFD L L VV +IS + HR L + D
Sbjct: 172 FSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDE 231
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
L +A++ CG + G L +GF+ +V+VGSSLI +YSKC I DA KVF+
Sbjct: 232 VTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDR 291
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+P RN V WT++IA +AQ +EL+R M+ + T +LSAC GAL QG
Sbjct: 292 IPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQG 351
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H R + N+LI MY KCG++++A+ +F+ + DI SW+++I+G A +
Sbjct: 352 RWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMN 411
Query: 316 GLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELD 373
G + +A+ LF +M M ++P+ ITFLGV+ +C HGG V++G YF++M + + L P ++
Sbjct: 412 GESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIE 471
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLL 416
HY C+VDLLGRA LL EA FI+ +PI P+ VIW AA+ L
Sbjct: 472 HYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEEL 531
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKS 476
EP V L+N+YA W RVRK M + +K PGCS++EI +V+ D+S
Sbjct: 532 EPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRS 591
Query: 477 NTRLSEILPVLDFLVDQMKTLGYVPEV--HEEK 507
+ + I + + +++ G+ P + H+E+
Sbjct: 592 HPEMGAIYETMISINKALQSKGFDPGILDHQEQ 624
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 154/303 (50%), Gaps = 4/303 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I++++ + R D + +C + G ++ G +V+V ++LI+
Sbjct: 112 IALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISA 171
Query: 180 YSKCRVIIDAYKVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPND 236
+S C + A VF+ +P VR+VVSW ++I+ + Q + ++ L+++ ++ + L P++
Sbjct: 172 FSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDE 231
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T S LS C G L G+ H GF + V +SLI MY KCG +E+A VF+
Sbjct: 232 VTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDR 291
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ ++ V W SMIAGYAQ L AI+LF EM DA T V+S+C H G + +G
Sbjct: 292 IPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQG 351
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ ++ ++ +L+ + ++ + + G +++A + + P+ W A S L +
Sbjct: 352 RWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGL-TQPDIFSWSAVISGLAM 410
Query: 417 EPE 419
E
Sbjct: 411 NGE 413
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 4/221 (1%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F ++ NV SW + A+++ + LY +M + P++++F +L AC
Sbjct: 83 LFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSL 142
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG--KDIVSWNSMI 309
L +GR H T+++G + V N+LIS + CG VE A VF+ + +D+VSWNSMI
Sbjct: 143 LHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMI 202
Query: 310 AGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+GY Q A+ +F E++ + PD +T + +S C GL++ GK G
Sbjct: 203 SGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGF 262
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ S ++D+ + G +E+AR ++P + N V W +
Sbjct: 263 VLDVFVGSSLIDMYSKCGQIEDARKVFDRIP-HRNTVCWTS 302
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 223/392 (56%), Gaps = 20/392 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S ++ C + ++ G + GF+ + V +S++TLYSKC + KVF M
Sbjct: 321 FSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMK 380
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R++++W+ IIAA++Q + E MR+ +PN+F S+LS C L QG+
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + +G V ++LI MY KCG++ EA +F + DI+SW +MI+GYA+HG
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
+ AI+LFE + K ++PD++TF+GV+++C H G+V+ G YF+SM+K + + P +HY
Sbjct: 501 SQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYG 560
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
C++DLL RAG L +A I+ MPI + V+W AA L L+P
Sbjct: 561 CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPN 620
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
CA TH+ LAN++A W +AA +R LMK KG+ PG S +++ + V+ F + D+S+ +
Sbjct: 621 CAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQ 680
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVDDA 511
+I +L+ L M+ Y+ E++ DD+
Sbjct: 681 GEDIYNILEELASGMEI--YILELNHLVTDDS 710
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 117/220 (53%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
+ L++D LS + +CG N G +++TG + +V+VGS+L+ +Y K I
Sbjct: 109 QSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIG 168
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+ KVF+EMP RN V+WTA+I + + L + M S +E + + + L A
Sbjct: 169 RSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASA 228
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
SGAL GRS H QT++ GF VANSL +MY KCG ++ ++ F M D+VSW +
Sbjct: 229 DSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTT 288
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
++ Y Q G + F+ M V P+ TF VIS C
Sbjct: 289 IVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCC 328
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 138/266 (51%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ R +++ D+ + A+ + + + G ++ GF N +V +SL T+Y+KC
Sbjct: 208 MGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGK 267
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ F +M +VVSWT I+ A+ Q + D L+ ++ MR S + PN++TF++++S
Sbjct: 268 LDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISC 327
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C L G H + +GF + + VANS++++Y KCG + VF +M +DI++W
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+++IA Y+Q G A + M + KP+ V+S C ++E+GK +
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEA 391
GL+ S ++ + + G + EA
Sbjct: 448 VGLEQTSMVCSALIIMYAKCGSIAEA 473
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSAC 246
DA +F+++P R+ VSWT II+ + L L+ MR S L + F + L C
Sbjct: 67 DARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTC 126
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G + H +++ G + + V ++L+ MY K G + + VF+ M ++ V+W
Sbjct: 127 GLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWT 186
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++I G + G + + F M + +V+ D+ + + + G + G+ S+
Sbjct: 187 AVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGR----SIHTQ 242
Query: 367 GLKPELDHYSCVVDLL 382
LK D S V + L
Sbjct: 243 TLKKGFDENSFVANSL 258
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-- 331
AN+ + + K ++++A +F+ + +D VSW ++I+GY + A+ LF +M Q
Sbjct: 52 ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSE 111
Query: 332 -RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
R+ P ++ LG + +C G G K GL + S ++D+ + G +
Sbjct: 112 LRIDPFLLS-LG-LKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGR 169
Query: 391 ARDFIKQMPIYPNAVIWEAAESRLL 415
+ +MP NAV W A + L+
Sbjct: 170 SCKVFDEMPT-RNAVTWTAVITGLV 193
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 223/392 (56%), Gaps = 20/392 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S ++ C + ++ G + GF+ + V +S++TLYSKC + KVF M
Sbjct: 321 FSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMK 380
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R++++W+ IIAA++Q + E MR+ +PN+F S+LS C L QG+
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + +G V ++LI MY KCG++ EA +F + DI+SW +MI+GYA+HG
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
+ AI+LFE + K ++PD++TF+GV+++C H G+V+ G YF+SM+K + + P +HY
Sbjct: 501 SQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYG 560
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
C++DLL RAG L +A I+ MPI + V+W AA L L+P
Sbjct: 561 CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPN 620
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
CA TH+ LAN++A W +AA +R LMK KG+ PG S +++ + V+ F + D+S+ +
Sbjct: 621 CAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQ 680
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVDDA 511
+I +L+ L M+ Y+ E++ DD+
Sbjct: 681 GEDIYNILEELASGMEI--YILELNHLVTDDS 710
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
+ L++D LS + +CG N G +++ G + +V+VGS+L+ +Y K I
Sbjct: 109 QSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIG 168
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+ KVF+EMP RN V+WTA+I + + L + M S +E + + + L A
Sbjct: 169 RSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASA 228
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
SGAL GRS H QT++ GF VANSL +MY KCG ++ ++ F M D+VSW +
Sbjct: 229 DSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTT 288
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
++ Y Q G + F+ M V P+ TF VIS C
Sbjct: 289 IVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCC 328
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 138/266 (51%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ R +++ D+ + A+ + + + G ++ GF N +V +SL T+Y+KC
Sbjct: 208 MGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGK 267
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ F +M +VVSWT I+ A+ Q + D L+ ++ MR S + PN++TF++++S
Sbjct: 268 LDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISC 327
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C L G H + +GF + + VANS++++Y KCG + VF +M +DI++W
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+++IA Y+Q G A + M + KP+ V+S C ++E+GK +
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEA 391
GL+ S ++ + + G + EA
Sbjct: 448 VGLEQTSMVCSALIIMYAKCGSIAEA 473
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSAC 246
DA +F+++P R+ VSWT II+ + L L+ MR S L + F + L C
Sbjct: 67 DARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTC 126
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G + H +++ G + + V ++L+ MY K G + + VF+ M ++ V+W
Sbjct: 127 GLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWT 186
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++I G + G + + F M + +V+ D+ + + + G + G+ S+
Sbjct: 187 AVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGR----SIHTQ 242
Query: 367 GLKPELDHYSCVVDLL 382
LK D S V + L
Sbjct: 243 TLKKGFDENSFVANSL 258
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-- 331
AN+ + + K ++++A +F+ + +D VSW ++I+GY + A+ LF +M Q
Sbjct: 52 ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSE 111
Query: 332 -RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
R+ P ++ LG + +C G G K GL + S ++D+ + G +
Sbjct: 112 LRIDPFLLS-LG-LKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGR 169
Query: 391 ARDFIKQMPIYPNAVIWEAAESRLL 415
+ +MP NAV W A + L+
Sbjct: 170 SCKVFDEMPT-RNAVTWTAVITGLV 193
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 234/421 (55%), Gaps = 29/421 (6%)
Query: 126 LHRERL-KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
LHR RL D + +C +R G A + G +A V+V +SL+ Y C
Sbjct: 110 LHRRRLAPPDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACG 169
Query: 185 VIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
+ A++VF+E+PV RN+VSW +++ FA + + L ++R + L P+ FT S+
Sbjct: 170 LFESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSV 229
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKD 301
L+AC GAL GR H ++G V N+LI +Y KCG VE+A VF M +
Sbjct: 230 LTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVART 289
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+VSW S+I G A +G A++LF M ++R+ P IT +GV+ +C H GLV++G YF+
Sbjct: 290 VVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFN 349
Query: 362 SMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------- 407
M K+G+ P ++H C+VDLLGRAG +EEA ++I MP+ PNAV+W
Sbjct: 350 EMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKL 409
Query: 408 ---EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
EAA +RL+ L+P + +V L+NLYA V W A +RK M G++ NPG S +E+
Sbjct: 410 ELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVEL 469
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRT 516
N VY F D+S+ +I L + ++++ GYVP ++ EE+ + A + +
Sbjct: 470 RNSVYEFVMGDRSHPESDQIYQTLAEIAERLRCQGYVPRTSNVLADIEEEEKETALNYHS 529
Query: 517 E 517
E
Sbjct: 530 E 530
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 222/405 (54%), Gaps = 18/405 (4%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + ++ E D+ L + +C S G LA + GF+++V+VGS+L+
Sbjct: 401 KALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALV 460
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
LY+KCR + + KVF + +++VSW A+I+ +AQ+ D L+ +R M+ + PN
Sbjct: 461 DLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTV 520
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T ILS C + + H IR G S + V+NSLI+ Y KCG++ ++Y F M
Sbjct: 521 TIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKM 580
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
++ VSWNS+I G H I LF++M+ +KPD +TF ++S+C H G V+EG
Sbjct: 581 PERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGC 640
Query: 358 VYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA------- 409
YF SM + LKP+L+ Y+C+VDLLGRAG L +A D I MP P+ IW +
Sbjct: 641 KYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKN 700
Query: 410 ----------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
A L P V LANLY + + ++VR +KD GLK PGCS
Sbjct: 701 HGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCS 760
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
WIE+ N + F A D+S+++ EI ++ L ++K GY+P+++
Sbjct: 761 WIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEIKRAGYIPQIY 805
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 139/282 (49%), Gaps = 7/282 (2%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+ + + G ++ G ++ G + +V V +SL+T+Y KC V+ DA ++FE+M
Sbjct: 111 YFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKM 170
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQG 255
P ++VSW +I+ F + L +R M+ + PN S + +C+ +L G
Sbjct: 171 PEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHG 230
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD-----IVSWNSMIA 310
R H ++ G + +SLI MY KCG+++ A +FN++ KD V WN MI+
Sbjct: 231 REIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMIS 290
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY +G +A+ LF +MM +KPD T + + S C + GK + K GLK
Sbjct: 291 GYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKN 350
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+ + ++D+ + G + ++ + N ++W A S
Sbjct: 351 NIRVETALLDMYLKCGDMGTGLKIFRRSQNH-NLIMWSAVIS 391
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 133/279 (47%), Gaps = 1/279 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+K D S + + + C + +I G L + G N+ V ++L+ +Y KC +
Sbjct: 313 IKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGL 372
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F N++ W+A+I+ AQ LEL+ + + ++L AC+
Sbjct: 373 KIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLT 432
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+G H +MGF S + V ++L+ +Y KC ++ + VF + KD+VSWN++I+
Sbjct: 433 LKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALIS 492
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GYAQ A A+ F +M + ++P+ +T ++S C H ++ K + + GL
Sbjct: 493 GYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGS 552
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + ++ + G + + ++MP N V W +
Sbjct: 553 TVLVSNSLIATYAKCGDINSSLYTFEKMP-ERNDVSWNS 590
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 5/250 (2%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM--- 196
+++ SC S +++ G + +++G Y+ SSLI +Y KC I +A +F +
Sbjct: 216 SSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDK 275
Query: 197 --PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
RN V W +I+ + L L+ M ++P+ T S+ S C+ S +
Sbjct: 276 DSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAF 335
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+ H + G + I+V +L+ MY KCG++ + +F +++ W+++I+ AQ
Sbjct: 336 GKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQ 395
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
G +A++LF E + D+ + V+ +C L EG K G ++
Sbjct: 396 SGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFV 455
Query: 375 YSCVVDLLGR 384
S +VDL +
Sbjct: 456 GSALVDLYAK 465
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 6/207 (2%)
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT-FTSILSACTGSGALGQGRSAHCQTIRM 265
+I + ++ D + +Y M + ++ +F F ++ A G + +GR H +++
Sbjct: 79 VIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKL 138
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + V NSL++MY KCG VE+AV +F M D+VSWN+MI+G+ + R++ F
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFF 198
Query: 326 EEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
M+ + + P+ + + I SC + G+ + K GL E S ++++ +
Sbjct: 199 RSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMK 258
Query: 385 AGLLEEARDFIKQM----PIYPNAVIW 407
G ++ A + + + NAVIW
Sbjct: 259 CGSIKNAENIFNSILDKDSVRRNAVIW 285
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 220/385 (57%), Gaps = 19/385 (4%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+F+S + SC ++ G I+ N +V ++LI +Y+KC + DA F
Sbjct: 518 TFISI-LGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNR 576
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ VR++ +WT II +AQ Q + L +R M+ ++PN+FT LS C+ +L G
Sbjct: 577 LSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG 636
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H + G S + V ++L+ MY KCG +EEA +F + +D ++WN++I GYAQ+
Sbjct: 637 QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQN 696
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDH 374
G +A+ F M+ + + PD +TF G++S+C H GLVEEGK +F+SM + G+ P +DH
Sbjct: 697 GQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDH 756
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLE 417
+C+VD+LGR G +E DFI++M + NA+IWE AA L+
Sbjct: 757 CACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQ 816
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
PE ++++ L+N++A WD RVR LM KG+K PGCSW+E V+ F + D S+
Sbjct: 817 PEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSH 876
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPE 502
++ EI LD L ++ ++ YVP+
Sbjct: 877 PQIQEIHLKLDELDRELASIQYVPK 901
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 155/281 (55%), Gaps = 8/281 (2%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
DV ++ + + +K + L+T + C +++N++ G L I+ G+ N ++G
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
L+ +YSKC + IDA VF+ + ++V W+A+I Q+ Q + ++L+ +MR P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N +T S+LSA T +G L G+S H + GF + + V+N+L++MY K G V + ++
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+M +D++SWN+ ++G G+ R + +F M+++ P+ TF+ ++ SC V
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533
Query: 355 EGKVYFDSMAKHGLKPELD--HYSC--VVDLLGRAGLLEEA 391
G+ + H +K +LD ++ C ++D+ + LE+A
Sbjct: 534 YGR----QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 141/274 (51%), Gaps = 3/274 (1%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+ S+ + C S R++ L ++ + ++ SL+ +Y+KCR A V +M
Sbjct: 114 YYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKM 173
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P R+VVSWTA+I E + + L++ M+N + PN+FT + L AC+ AL G+
Sbjct: 174 PDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGK 233
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H Q ++G + V ++L+ +Y KCG +E A +F M ++ V+WN ++ GYAQ G
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+ LF MM+ VK + T V+ C + +++G+V + K G + +
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN-EFIG 352
Query: 377 C-VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
C +VD+ + GL +A K + P+ V+W A
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSA 385
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 131/272 (48%), Gaps = 5/272 (1%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
S LS A +T N++ G + GF +V V ++L+T+Y K + D K++E
Sbjct: 420 SLLSAAT----NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYES 475
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
M R+++SW A ++ D L ++ M PN +TF SIL +C+ + G
Sbjct: 476 MVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYG 535
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H I+ V +LI MY KC +E+A FN + +D+ +W +I YAQ
Sbjct: 536 RQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQT 595
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
+A++ F +M ++ VKP+ T G +S C +E G+ + K G ++
Sbjct: 596 NQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG 655
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
S +VD+ + G +EEA + + I + + W
Sbjct: 656 SALVDMYAKCGCMEEAEALFEAL-IRRDTIAW 686
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 144/295 (48%), Gaps = 1/295 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + ++ E + + L+T + +C + G A + G + +++VGS+L+ L
Sbjct: 198 IYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDL 257
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I A K+F MP +N V+W ++ +AQ V L+L+ M ++ N+FT
Sbjct: 258 YAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTL 317
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
T++L C S L QG+ H I+ G+ + L+ MY KCG +A+ VF +
Sbjct: 318 TTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKK 377
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
DIV W+++I Q G + +I LF M P+ T ++S+ + G ++ G+
Sbjct: 378 PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSI 437
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ K+G + ++ + +V + + G + + + M + + + W A S L
Sbjct: 438 HACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLSGL 491
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 82/140 (58%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK ++ + +E +K + L+ ++ C S ++ GG + ++G +++++VGS+L
Sbjct: 599 EKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSAL 658
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC + +A +FE + R+ ++W II +AQ Q + L +RMM + + P+
Sbjct: 659 VDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDG 718
Query: 237 FTFTSILSACTGSGALGQGR 256
TFT ILSAC+ G + +G+
Sbjct: 719 VTFTGILSACSHQGLVEEGK 738
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 226/386 (58%), Gaps = 20/386 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+T +TSC S+ G L I+ + +V+VGSSL+ +Y+K I +A VFE +P
Sbjct: 368 FATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+VVS TAII+ +AQ + LEL+R ++ ++ N T+T +L+A +G AL G+
Sbjct: 428 ERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQ 487
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R S++ + NSLI MY KCGN+ + +F+ M+ + ++SWN+M+ GY++HG
Sbjct: 488 VHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGE 547
Query: 318 AVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA--KHGLKPELDH 374
+ LF M ++ +VKPD++T L V+S C HGGL ++G F+ M+ K ++P+++H
Sbjct: 548 GREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEH 607
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLE 417
Y CVVDLLGR+G +EEA +FIK+MP P A IW A + L +E
Sbjct: 608 YGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIE 667
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
P A +V L+NLYA W+ + +R LM K + PG S IE+ V++ F A D+S+
Sbjct: 668 PGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSH 727
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPEV 503
R EI + L K +GYVP++
Sbjct: 728 PRREEICMKVKELSTSFKEVGYVPDL 753
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 151/294 (51%), Gaps = 32/294 (10%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ C + R R G I+T ++ +V++ + LI LY+KC + DA+ VF+EMP RNV
Sbjct: 250 LNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNV 309
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSML---------------------EPNDFTFT 240
VSWTA+I+A++Q L L+ L EPN+FTF
Sbjct: 310 VSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFA 369
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
++L++CT S GR H I++ + ++ V +SL+ MY K G + EA VF + +
Sbjct: 370 TVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPER 429
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D+VS ++I+GYAQ GL A++LF + + +K + +T+ GV+++ ++ GK
Sbjct: 430 DVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGK--- 486
Query: 361 DSMAKHGLKPELDHY----SCVVDLLGRAGLLEEARDFIKQMPIYPNAVI-WEA 409
+ H L+ E+ + + ++D+ + G L +R M Y VI W A
Sbjct: 487 -QVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM--YERTVISWNA 537
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+ +IL+ C A +G+ H I+ + + + LI +Y KC ++ +A VF+ M
Sbjct: 245 NYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEM 304
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV---------------------KPD 336
+++VSW +MI+ Y+Q G A +A++LF +K + +P+
Sbjct: 305 PERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPN 364
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
TF V++SC G+ + K + + S ++D+ + G + EAR +
Sbjct: 365 EFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFE 424
Query: 397 QMP 399
+P
Sbjct: 425 CLP 427
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 224/386 (58%), Gaps = 19/386 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D +F S + +C S + + G CLAI+ G NVYV +LI +Y+ C + A +VF
Sbjct: 121 DYTFPSL-LKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVF 179
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+++ VV++ A+I +A+ + + L L+R ++ L+P D T S+LS+C GAL
Sbjct: 180 DKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALD 239
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ H + GF +++V +LI MY KCG++++AV VF NM +D +W++MI YA
Sbjct: 240 LGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYA 299
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPEL 372
HG ++A+ LF+EM K +PD ITFLG++ +C H GLVEEG YF M K+G+ P +
Sbjct: 300 IHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGI 359
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLL 415
HY C+VDLLGRAG LEEA +FI +PI P ++W E
Sbjct: 360 KHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFE 419
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L+ ++ L+NL A W+ VRKLM ++G+ PGCS +E+ NVV+ F + D
Sbjct: 420 LDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDG 479
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVP 501
++ +++ LD LV ++K +GYVP
Sbjct: 480 VHSVSTKLHQALDELVKELKLVGYVP 505
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%), Gaps = 6/262 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI---TLYSKCRVIIDAYKVFEEMPV 198
+ C S R ++ Q AI+T +++ V + I +L + A+ +F+++P
Sbjct: 27 LPKCTSLRELKQ---LQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQ 83
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
++V + + +A+ L+ + S L P+D+TF S+L AC AL +GR
Sbjct: 84 PDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQL 143
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
HC I++G + V +LI+MY C ++ A VF+ + +V++N+MI GYA+
Sbjct: 144 HCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRP 203
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A+ LF E+ + +KP +T L V+SSC G ++ GK + + K+G + + +
Sbjct: 204 NEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTAL 263
Query: 379 VDLLGRAGLLEEARDFIKQMPI 400
+D+ + G L++A + M +
Sbjct: 264 IDMYAKCGSLDDAVCVFENMAV 285
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 220/385 (57%), Gaps = 19/385 (4%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+F+S + SC ++ G I+ N +V ++LI +Y+KC + DA F
Sbjct: 518 TFISI-LGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNR 576
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ VR++ +WT II +AQ Q + L +R M+ ++PN+FT LS C+ +L G
Sbjct: 577 LSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG 636
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H + G S + V ++L+ MY KCG +EEA +F + +D ++WN++I GYAQ+
Sbjct: 637 QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQN 696
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDH 374
G +A+ F M+ + + PD +TF G++S+C H GLVEEGK +F+SM + G+ P +DH
Sbjct: 697 GQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDH 756
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLE 417
+C+VD+LGR G +E DFI++M + NA+IWE AA L+
Sbjct: 757 CACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQ 816
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
PE ++++ L+N++A WD RVR LM KG+K PGCSW+E V+ F + D S+
Sbjct: 817 PEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSH 876
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPE 502
++ EI LD L ++ ++ YVP+
Sbjct: 877 PQIQEIHLKLDELDRELASIQYVPK 901
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 155/281 (55%), Gaps = 8/281 (2%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
DV ++ + + +K + L+T + C +++N++ G L I+ G+ N ++G
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
L+ +YSKC + IDA VF+ + ++V W+A+I Q+ Q + ++L+ +MR P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N +T S+LSA T +G L G+S H + GF + + V+N+L++MY K G V + ++
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+M +D++SWN+ ++G G+ R + +F M+++ P+ TF+ ++ SC V
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533
Query: 355 EGKVYFDSMAKHGLKPELD--HYSC--VVDLLGRAGLLEEA 391
G+ + H +K +LD ++ C ++D+ + LE+A
Sbjct: 534 YGR----QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 141/274 (51%), Gaps = 3/274 (1%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+ S+ + C S R++ L ++ + ++ SL+ +Y+KCR A V +M
Sbjct: 114 YYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKM 173
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P R+VVSWTA+I E + + L++ M+N + PN+FT + L AC+ AL G+
Sbjct: 174 PDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGK 233
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H Q ++G + V ++L+ +Y KCG +E A +F M ++ V+WN ++ GYAQ G
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+ LF MM+ VK + T V+ C + +++G+V + K G + +
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN-EFIG 352
Query: 377 C-VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
C +VD+ + GL +A K + P+ V+W A
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSA 385
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 131/272 (48%), Gaps = 5/272 (1%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
S LS A +T N++ G + GF +V V ++L+T+Y K + D K++E
Sbjct: 420 SLLSAAT----NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYES 475
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
M R+++SW A ++ D L ++ M PN +TF SIL +C+ + G
Sbjct: 476 MVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYG 535
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H I+ V +LI MY KC +E+A FN + +D+ +W +I YAQ
Sbjct: 536 RQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQT 595
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
+A++ F +M ++ VKP+ T G +S C +E G+ + K G ++
Sbjct: 596 NQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG 655
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
S +VD+ + G +EEA + + I + + W
Sbjct: 656 SALVDMYAKCGCMEEAEALFEAL-IRRDTIAW 686
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 144/295 (48%), Gaps = 1/295 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + ++ E + + L+T + +C + G A + G + +++VGS+L+ L
Sbjct: 198 IYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDL 257
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I A K+F MP +N V+W ++ +AQ V L+L+ M ++ N+FT
Sbjct: 258 YAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTL 317
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
T++L C S L QG+ H I+ G+ + L+ MY KCG +A+ VF +
Sbjct: 318 TTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKK 377
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
DIV W+++I Q G + +I LF M P+ T ++S+ + G ++ G+
Sbjct: 378 PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSI 437
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ K+G + ++ + +V + + G + + + M + + + W A S L
Sbjct: 438 HACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLSGL 491
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 82/140 (58%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK ++ + +E +K + L+ ++ C S ++ GG + ++G +++++VGS+L
Sbjct: 599 EKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSAL 658
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC + +A +FE + R+ ++W II +AQ Q + L +RMM + + P+
Sbjct: 659 VDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDG 718
Query: 237 FTFTSILSACTGSGALGQGR 256
TFT ILSAC+ G + +G+
Sbjct: 719 VTFTGILSACSHQGLVEEGK 738
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 229/393 (58%), Gaps = 23/393 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R+ + +A S+ + +CG+ + A ++ G ++V+V SSLI Y K +
Sbjct: 175 RDGVAPNAYTFSSVLGACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLD 231
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+VF+EM R++V W +IIA FAQ +EL+ M+++ N T TS+L ACT
Sbjct: 232 GGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACT 291
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G L GR H ++ + + + N+L+ MYCKCG++E+A +F+ M +D++SW++
Sbjct: 292 GMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWST 349
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-H 366
MI+G AQ+G + A+ +F+ M + V P+ IT +GV+ +C H GLVE+G YF SM K
Sbjct: 350 MISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLF 409
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------A 409
G++PE +H++C+VDLLGRAG L+EA +FI+ M + P+AVIW A
Sbjct: 410 GIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYA 469
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
A L LEP+ V L+N YA +R W A + K M+D+G+K PG SWIE+ V+
Sbjct: 470 AREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHV 529
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
F A D S+ I+ L+ L+ ++ LGYVP+
Sbjct: 530 FIAGDLSHPCSDTIVQELNRLIGRISALGYVPQ 562
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 150/294 (51%), Gaps = 28/294 (9%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLEL 223
G ++V +SL+++Y+K ++ DA ++F+ MP RNVV+WT ++AA A + + + L
Sbjct: 110 GAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRF 169
Query: 224 YRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
M + PN +TF+S+L AC G L + H T+++G S + V +SLI Y K
Sbjct: 170 LVAMWRDGVAPNAYTFSSVLGACGTPGVLA---ALHASTVKVGLDSDVFVRSSLIDAYMK 226
Query: 284 CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
G+++ VF+ M +D+V WNS+IAG+AQ G V AI+LF M + T V
Sbjct: 227 LGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSV 286
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGRAGLLEEARDFIKQMPIY 401
+ +C ++E G+ + H LK E D ++ ++D+ + G LE+A +MP
Sbjct: 287 LRACTGMVMLEAGR----QVHAHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMP-Q 341
Query: 402 PNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ + W S L + A +A RV LMK +G+ N
Sbjct: 342 RDVISWSTMISGLAQNGKSA-----------------EALRVFDLMKSEGVAPN 378
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 211/365 (57%), Gaps = 26/365 (7%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVF------EEMP-VR-NVVSWTAIIAAFAQEWQVDMC 220
N+ ++LI+ Y+ +A+ +F +E P VR NVVSW+A+I FA + Q +
Sbjct: 336 NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEA 395
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
LEL+R M+ + ++ N T S+LS C AL GR H +R I V N LI+M
Sbjct: 396 LELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINM 455
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G+ +E VF + KD++SWN+M+AGY HGL AI F++M+K +PD +TF
Sbjct: 456 YTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTF 515
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ V+S+C H GLV EG+ FD M K ++P+++HY+C+VDLLGRAGLL+EA +K MP
Sbjct: 516 VAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMP 575
Query: 400 IYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
+ PNA +W E A L E A +++ L+N+YA W+ +A+
Sbjct: 576 VEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAK 635
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VR K KGLK PG SWI++ VY F A + + L E+ +L L QM+ GY+P+
Sbjct: 636 VRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPD 695
Query: 503 VHEEK 507
+ EE+
Sbjct: 696 IDEEQ 700
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 116/241 (48%), Gaps = 39/241 (16%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ GF N++VG+ L+ +Y K + DA KVFE M VR+ VSW +++ +A +
Sbjct: 162 VEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGAS 221
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSG------------------------------- 250
E++RMM ++ LEPN T+TS+LS+ G
Sbjct: 222 EMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVS 281
Query: 251 ----ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
A +G+ H ++ GF +Y+ V NSLI +Y K GNV A +F + K+IVSWN
Sbjct: 282 VDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWN 341
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQ----RVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
++I+ YA G A +F ++ K V+P+ +++ VI G EE F
Sbjct: 342 ALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRR 401
Query: 363 M 363
M
Sbjct: 402 M 402
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR---NVVSWTAIIAAFAQEWQVD 218
I TG + ++ + ++++Y+ ++ DA +VFE P+ N++ W +I+ A +
Sbjct: 58 IVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCE 117
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
LE+Y MR + + FTF ++ AC G+ RS H + MGF + V N L+
Sbjct: 118 EALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELM 177
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY K G +++A VF M + VSWN+M++GYA + A ++F M ++P+ +
Sbjct: 178 GMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLV 237
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
T+ ++SS G E F M G+ + + V+ +
Sbjct: 238 TWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSV 280
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 73/148 (49%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + ++K ++ +++ ++ C + G +R+ N+ VG+ L
Sbjct: 393 EEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGL 452
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+K + VFE++ ++++SW ++A + + + + M EP+
Sbjct: 453 INMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDG 512
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIR 264
TF ++LSAC+ +G + +GR + I+
Sbjct: 513 VTFVAVLSACSHAGLVAEGRELFDKMIK 540
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 229/404 (56%), Gaps = 18/404 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++ + R++ D + + +C + + G I++G + +VG++L
Sbjct: 466 EETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAAL 525
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC +I A K+ + + +VSW AII+ F+ Q + + + M + P++
Sbjct: 526 VDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDN 585
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ ++L C +G G+ H Q I+ S + + ++L+ MY KCGN++++ +F
Sbjct: 586 FTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEK 645
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+D V+WN+M+ GYA HGL A+ LFE M VKP+ TF+ V+ +C H GLV++G
Sbjct: 646 APNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKG 705
Query: 357 KVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
YFD M +++GL P+ +HYSC+VD+LGR+G ++EA + +++MP +AVIW
Sbjct: 706 LHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCK 765
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
+A + L L+P+ ++ V L+N+YA W + +RK+M+ LK PGC
Sbjct: 766 IHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGC 825
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SWIE+ + V+ F DK + R EI L L+ +M+++GY+P+
Sbjct: 826 SWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPD 869
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 155/286 (54%), Gaps = 5/286 (1%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L + L D LS A+ +C S R G LA+++ ++N+ V ++++ +Y KC+
Sbjct: 374 LLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKA 433
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ +A +F+ M R+ VSW AIIAA Q + L + M +S +EP+DFT+ S+L A
Sbjct: 434 LAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKA 493
Query: 246 CTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
C G AL G H + I+ MGF S++ A L+ MYCKCG +E+A + + K +V
Sbjct: 494 CAGRQALNTGMEIHTRIIKSGMGFDSFVGAA--LVDMYCKCGMIEKADKIHDRTEQKTMV 551
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SWN++I+G++ + A F M++ V PD T+ V+ +C + V GK +
Sbjct: 552 SWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQI 611
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K L+ ++ S +VD+ + G +++++ ++ P + V W A
Sbjct: 612 IKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP-NRDFVTWNA 656
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 147/297 (49%), Gaps = 5/297 (1%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ K I + ++ R + D + L+ + +CG+ G L ++ GF +V GS
Sbjct: 161 ECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGS 220
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC+ + D+ VF E+P +N VSW+A+IA Q + LEL++ M+ +
Sbjct: 221 ALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGV 280
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ + S+ +C AL G+ H ++ F S I V + + MY KCG + +A V
Sbjct: 281 SQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVL 340
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR--HGGL 352
++M + S+N++I GYA+ +A+ F+ ++K + D IT G +++C G L
Sbjct: 341 SSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDL 400
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
EG+ K + + ++D+ G+ L EA D M +AV W A
Sbjct: 401 --EGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMME-RRDAVSWNA 454
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 1/277 (0%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
V S ++ SC + +R G A+++ F +++ VG++ + +Y+KC + DA KV
Sbjct: 280 VSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKV 339
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
MP ++ S+ AII +A+ + L+ ++++ + L ++ T + L+AC
Sbjct: 340 LSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGD 399
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+GR H ++ S I VAN+++ MY KC + EA +F+ M +D VSWN++IA
Sbjct: 400 LEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAAC 459
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+G + F M+ R++PD T+ V+ +C + G + K G+ +
Sbjct: 460 EQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDS 519
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD+ + G++E+A D I V W A
Sbjct: 520 FVGAALVDMYCKCGMIEKA-DKIHDRTEQKTMVSWNA 555
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 115/243 (47%)
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
Y C ++ +V +S+I+ Y+ C + A K F EMP R+VVSW ++I+ F Q +
Sbjct: 102 YACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGE 161
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
++++ M + + + +L AC G H ++ GF + ++
Sbjct: 162 CRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSA 221
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
L+ MY KC +++++ VF+ + K+ VSW++MIAG Q+ V ++LF+EM V
Sbjct: 222 LLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVS 281
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+ + SC + GK K ++ + +D+ + G + +A+ +
Sbjct: 282 QSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLS 341
Query: 397 QMP 399
MP
Sbjct: 342 SMP 344
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF+ I C+ +L G+ AH + I GF V+N L+ MY KC ++ A VF+ M
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+ +D+VS+NS+I+GYA G A F EM ++ D +++ VIS G +
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPER----DVVSWNSVISGFLQNGECRKSI 166
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
F M + G+ D S V +L G LEE
Sbjct: 167 DVFLEMGRCGVG--FDRASLAV-VLKACGALEE 196
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 244/436 (55%), Gaps = 21/436 (4%)
Query: 84 DSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVT 143
D+ K +G ++ F +++ + LD +D + + ++ E K D +
Sbjct: 161 DASKVFESVSGFDA-FAFNSMINGYLDRGQLDGS--LGIVRNMTGEAEKWDYVSYVAVLG 217
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
C S ++ GA A++ NVYVGS+L+ +Y KC + DA + FE +P +NVVS
Sbjct: 218 HCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVS 277
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA++ A+ Q + L+L+ M ++PN+FT+ L++C G AL G + +
Sbjct: 278 WTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVM 337
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ G + ++ V+N+L++MY K G++E+A VF +M +D+VSWN +I GYA HGLA ++
Sbjct: 338 KTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGME 397
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLL 382
F M+ V P +TF+GV+S+C GLV+E Y ++M K G+ P +HY+C+V LL
Sbjct: 398 AFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLL 457
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHV 425
R G L+EA FI I + V W + AE L LEP T+V
Sbjct: 458 CRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYV 517
Query: 426 QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILP 485
L+N+YA WD +VRK M+++ ++ +PG SWI + + V+ F +E+K + ++ +I
Sbjct: 518 LLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAK 577
Query: 486 VLDFLVDQMKTLGYVP 501
L+ L+DQ+K +GYVP
Sbjct: 578 KLEELIDQIKAIGYVP 593
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 1/270 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS AV++ + R+ G A++ GF YV ++++ +Y +C + DA KVFE +
Sbjct: 111 LSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVS 170
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ ++ ++I + Q+D L + R M + + ++ ++L C G
Sbjct: 171 GFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQ 230
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H Q ++ + V ++L+ MY KC +V +A F + K++VSW +++ Y Q+ L
Sbjct: 231 VHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNEL 290
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ LF +M + V+P+ T+ ++SC + G + K G L +
Sbjct: 291 YEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNA 350
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++++ ++G +E+A MP+ + V W
Sbjct: 351 LMNMYSKSGSIEDAHRVFISMPL-RDVVSW 379
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 10/244 (4%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+V + ++LI+ Y+KC + A VF+ MP RN VS +++ +A + L+L R++
Sbjct: 44 DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLLRVVD 103
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
M N++ ++ +SA + GR H ++ GF V N+++ MYC+C ++E
Sbjct: 104 FGM---NEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHME 160
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A VF ++ G D ++NSMI GY G ++ + M + K D ++++ V+ C
Sbjct: 161 DASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCA 220
Query: 349 H-GGLVEEGKVYFDSMAKHGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
V +V+ ++ K + EL+ Y S +VD+ G+ + +A + +P N V
Sbjct: 221 SMKDSVLGAQVHAQALKK---RLELNVYVGSALVDMYGKCDHVHDANRAFEVLP-EKNVV 276
Query: 406 IWEA 409
W A
Sbjct: 277 SWTA 280
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 230/405 (56%), Gaps = 54/405 (13%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEM---------------------------- 196
GF +++YVG++LI +Y KC + ++VF+EM
Sbjct: 170 GFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELF 229
Query: 197 ---PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
P++++V+WTA++ +AQ + LE++ M+ + ++ ++ T ++SAC GA
Sbjct: 230 DGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAK 289
Query: 254 QGRSAHCQTIRMGF--FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ GF S + V ++LI MY KCG+VE+A VF M +++ S++SMI G
Sbjct: 290 YANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVG 349
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKP 370
+A HGLA A++LF+EM+K +KP+ +TF+GV+++C H G+VE+G+ F M + HG+ P
Sbjct: 350 FAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAP 409
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----------------AESRL 414
DHY+C+VDLLGRAG LEEA + +K MP+ P+ +W A A S L
Sbjct: 410 SEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHL 469
Query: 415 L-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIE-IMNVVYRFRA 472
LEP ++ L+N+YA WD ++VRKLM+ KGLK NPGCSW+E +++ F A
Sbjct: 470 FELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFA 529
Query: 473 EDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD--DASHKR 515
D S+ + EI L+ L+D++K LGY P + D D KR
Sbjct: 530 GDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKR 574
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 129/273 (47%), Gaps = 36/273 (13%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYK--VFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
R G +V + L+ +K V +D Y VF+++ N WTA+I +A +
Sbjct: 63 FRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFME 122
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM-GFFSYIQVANSLI 278
+ LY MR + P FTFT++L AC+ + + GR H QTI + GF S + V N+LI
Sbjct: 123 SVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLI 182
Query: 279 SMYCKC-------------------------------GNVEEAVYVFNNMHGKDIVSWNS 307
MY KC GN+E A +F+ + KD+V+W +
Sbjct: 183 DMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTA 242
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M+ GYAQ+ A+++FE M VK D +T +GVIS+C G + D + G
Sbjct: 243 MVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSG 302
Query: 368 LKPELDHY--SCVVDLLGRAGLLEEARDFIKQM 398
P + S ++D+ + G +E+A ++M
Sbjct: 303 FGPTSNVVVGSALIDMYAKCGSVEDAYKVFERM 335
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGF--IANVYVGSSLITLYSKCRVIID 188
+K D L +++C + + +A ++GF +NV VGS+LI +Y+KC + D
Sbjct: 268 VKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVED 327
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
AYKVFE M RNV S++++I FA +EL+ M + ++PN TF +L+AC+
Sbjct: 328 AYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSH 387
Query: 249 SGALGQGRS-----AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN----NMHG 299
+G + QG+ C + Y ++ + + G +EEA+ + N HG
Sbjct: 388 AGMVEQGQQLFAMMEECHGVAPSEDHYA----CMVDLLGRAGRLEEALNLVKMMPMNPHG 443
Query: 300 KDIVSWNSMIAGYAQHG----LAVRAIDLFE 326
W +++ HG + A LFE
Sbjct: 444 G---VWGALLGACRIHGNPDMAQIAASHLFE 471
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 225/380 (59%), Gaps = 19/380 (5%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIR-GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
RL+ D L +++C + ++ G + + A+V+VG++L+ +Y KC +
Sbjct: 207 RLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNS 266
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
AYKVF+EMPV+NVV+W A+I+ A + + L+ +RMM++ ++P++ T +L++C
Sbjct: 267 AYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCAN 326
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
G L G+ H R + V N+L+ MY KCG+++EA VF +M +D+ S+ +M
Sbjct: 327 LGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAM 386
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHG 367
I G A HG A A +F EM + ++P+ +TFLG++ +C HGGLV EGK YF M+ K+
Sbjct: 387 IFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYK 446
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP----------------NAVIWEAAE 411
L+P+ +HY C++DLLGRAGL++EA + I +M I P N I E+
Sbjct: 447 LRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVM 506
Query: 412 SRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
+L L+P+ T++ + NLY+ V W A ++RK MK+K ++ PGCS IE+ VV+ F
Sbjct: 507 QKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEF 566
Query: 471 RAEDKSNTRLSEILPVLDFL 490
R DKS+ R I+ ++ +
Sbjct: 567 RKGDKSHPRSKVIIANINLI 586
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 146/271 (53%), Gaps = 4/271 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA-NVYVGSSLITLYSKCRVIIDA 189
L+ D + + + + IR G +I+TG + NVYV ++L+ LYS C I D
Sbjct: 106 LEPDGFTIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDV 165
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
KVF+E P R++VSWT +I AF + +E + M + L + T +LSAC+
Sbjct: 166 QKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNL 225
Query: 250 GALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G L G+ H IR + + + V N+L+ MY KC ++ A VF+ M K++V+WN+
Sbjct: 226 GDLNLGQKVH-SYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNA 284
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI+G A G A+D F M + VKPD +T +GV++SC + G++E GK M ++
Sbjct: 285 MISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNH 344
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ + + ++D+ + G ++EA + M
Sbjct: 345 ILADKFVGNALLDMYAKCGSIDEAFRVFESM 375
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 235/422 (55%), Gaps = 29/422 (6%)
Query: 125 DLHRERLKV-DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+LHR RL + D + +C +R G A + GF+ V+V +SL+ LY C
Sbjct: 793 ELHRRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGAC 852
Query: 184 RVIIDAYKVFEEMPVR--NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
+ A+KVF+EMPVR N+VSW +++ +FA + + L ++ M P+ FT S
Sbjct: 853 GLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVS 912
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GK 300
+L+AC GAL GR H ++G V+N+LI +Y KCG+V +A +F M G+
Sbjct: 913 VLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGR 972
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
+VSW S+I G A +G A++LF M ++++ P IT +GV+ +C H GLV++G YF
Sbjct: 973 TVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYF 1032
Query: 361 DSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------ 407
D M + +G+ P ++H C+VDLLGRAG +EEA D+I MP+ PNAV+W
Sbjct: 1033 DRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKK 1092
Query: 408 ----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIE 462
+ A RL+ L+P + +V L+NLYA V W +RK M ++ NPG S +E
Sbjct: 1093 LELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVE 1152
Query: 463 IMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKR 515
+ N VY F D+S+ +I +L + ++++ GY+P ++ EE+ + A +
Sbjct: 1153 LRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYH 1212
Query: 516 TE 517
+E
Sbjct: 1213 SE 1214
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 223/387 (57%), Gaps = 18/387 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + +C + + G CL+++ G NVYV +LI +Y++C + A VF
Sbjct: 130 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVF 189
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ + VV + A+I +A+ + + L L+R M+ L+PN+ T S+LS+C G+L
Sbjct: 190 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLD 249
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ H + GF Y++V +LI M+ KCG++++AV +F NM KD +W++MI YA
Sbjct: 250 LGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYA 309
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPEL 372
HG A ++ +FE M + V+PD ITFLG++++C H GLVEEG+ YF M + G+ P +
Sbjct: 310 NHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSI 369
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL- 415
HY +VDLLGRAG LE+A +FI ++PI P ++W E R+L
Sbjct: 370 KHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILE 429
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L+ +V L+NLYA + W+ +RK+MKD+ PGCS IE+ NVV+ F + D
Sbjct: 430 LDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDG 489
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ +++ LD +V ++K GYVP+
Sbjct: 490 VKSATTKLHRALDEMVKELKLAGYVPD 516
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 117/221 (52%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F+ M ++V + +I +++ L+ + L P+++TF S+L AC
Sbjct: 84 ARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAV 143
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ AL +GR HC ++++G + V +LI+MY +C +V+ A VF+ + +V +N+M
Sbjct: 144 AKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAM 203
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I GYA+ A+ LF EM + +KP+ IT L V+SSC G ++ GK + KHG
Sbjct: 204 ITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGF 263
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + ++D+ + G L++A + M Y + W A
Sbjct: 264 CKYVKVNTALIDMFAKCGSLDDAVSIFENMR-YKDTQAWSA 303
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 235/423 (55%), Gaps = 20/423 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
++ K +S+ + R ++ D + V +C + + G +++G + +VGS
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGS 480
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y KC ++++A K+ + + + VSW +II+ F+ + Q + + M + P
Sbjct: 481 ALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIP 540
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++FT+ ++L C + G+ H Q +++ S + +A++L+ MY KCGN++++ +F
Sbjct: 541 DNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMF 600
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+D V+W++MI YA HG +AI LFEEM VKP+ F+ V+ +C H G V+
Sbjct: 601 EKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVD 660
Query: 355 EGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
+G YF M H GL P ++HYSC+VDLLGR+ + EA I+ M + VIW
Sbjct: 661 KGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSN 720
Query: 408 -------EAAE----SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
E AE S L L+P+ ++ +V LAN+YA V W + A++R +MK+ LK P
Sbjct: 721 CKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEP 780
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
GCSWIE+ + V+ F DK++ R EI LVD+MK GYVP++ + + D +
Sbjct: 781 GCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDI--DSMLDEEVEEQ 838
Query: 517 EPF 519
+P+
Sbjct: 839 DPY 841
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 153/292 (52%), Gaps = 1/292 (0%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + L R L D LS A+T+C + G LA++ G N+ V ++++
Sbjct: 323 KALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTIL 382
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
+Y KC +++A +F++M R+ VSW AIIAA Q ++ L L+ M S +EP+DF
Sbjct: 383 DMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDF 442
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T+ S++ AC G AL G H + ++ G V ++L+ MY KCG + EA + + +
Sbjct: 443 TYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRL 502
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
K VSWNS+I+G++ + A F +M++ V PD T+ V+ C + +E GK
Sbjct: 503 EEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGK 562
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K L ++ S +VD+ + G ++++R ++ P + V W A
Sbjct: 563 QIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP-KRDYVTWSA 613
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 162/329 (49%), Gaps = 19/329 (5%)
Query: 96 NSTFGSSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFLSTAV 142
N F S +FD + + VV L+S +H+ ++R+ +++ D + S +
Sbjct: 87 NMGFAQS-LFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVL 145
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+C + G CLAI+ GF +V GS+L+ +YSKC+ + A+++F EMP RN+V
Sbjct: 146 KACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLV 205
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
W+A+IA + Q + L+L++ M + + T+ S+ +C G A G H
Sbjct: 206 CWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHA 265
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
++ F + + + MY KC + +A VFN + S+N++I GYA+ ++A+
Sbjct: 266 LKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKAL 325
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCR--HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
++F+ + + + D I+ G +++C G L EG K GL + + ++D
Sbjct: 326 EIFQSLQRTYLSFDEISLSGALTACSVIKGHL--EGIQLHGLAVKCGLGFNICVANTILD 383
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G+ G L EA M +AV W A
Sbjct: 384 MYGKCGALVEACTIFDDME-RRDAVSWNA 411
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 143/273 (52%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + D+ + + V S ++ SC + G A+++ F + +G++ + +
Sbjct: 224 LKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + DA+KVF +P S+ AII +A++ Q LE+++ ++ + L ++ +
Sbjct: 284 YAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISL 343
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+ L+AC+ +G H ++ G I VAN+++ MY KCG + EA +F++M
Sbjct: 344 SGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMER 403
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D VSWN++IA + Q+ V+ + LF M++ ++PD T+ V+ +C + G
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEI 463
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ K G+ + S +VD+ G+ G+L EA
Sbjct: 464 HGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAE 496
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 43/308 (13%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S + C + + + G I T F+ +YV + L+ Y K + A+KVF+ MP
Sbjct: 9 FSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMP 68
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NSMLE----------------- 233
R+V+SW +I +A+ + L+ M NS+L
Sbjct: 69 HRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128
Query: 234 ------PNDF-TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
P+D+ TF+ +L AC+G G G HC I+MGF + + ++L+ MY KC
Sbjct: 129 MRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A +F M +++V W+++IAGY Q+ + + LF++M+K + T+ V S
Sbjct: 189 LDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV----VDLLGRAGLLEEARDFIKQMPIYP 402
C + G + H LK + + S + +D+ + + +A +P P
Sbjct: 249 CAGLSAFKLGT----QLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304
Query: 403 ----NAVI 406
NA+I
Sbjct: 305 RQSYNAII 312
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 36/206 (17%)
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FTF+ IL C+ AL G+ AH Q I F I VAN L+ YCK N+ A VF+
Sbjct: 7 FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66
Query: 297 MHGKDIVSWNSMIAGYAQ-------------------------------HGLAVRAIDLF 325
M +D++SWN+MI GYA+ +G+ ++I++F
Sbjct: 67 MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEG-KVYFDSMA-KHGLKPELDHYSCVVDLLG 383
M ++ D TF V+ +C G+ + G + +A + G + ++ S +VD+
Sbjct: 127 VRMRSLKIPHDYATFSVVLKAC--SGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ L+ A ++MP N V W A
Sbjct: 185 KCKKLDGAFRIFREMP-ERNLVCWSA 209
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 227/422 (53%), Gaps = 50/422 (11%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
L +++C +++ GG I+ G + N+ + ++LI +++ C + A VF+EM
Sbjct: 242 LVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEM 301
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMC-------------------------------LELYR 225
R+V+SWT+I+ FA ++D+ L L+R
Sbjct: 302 KTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFR 361
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ S ++P++FT SIL+AC GAL G A + + + N+LI MY KCG
Sbjct: 362 DMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCG 421
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
NVE+A +FN M KD +W +MI G A +G A+ +F M++ V PD IT++GV+
Sbjct: 422 NVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMC 481
Query: 346 SCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C H GLV +GK +F +MA +HG+KP L HY C+VDLLGRAG L+EA + I MP+ PN+
Sbjct: 482 ACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNS 541
Query: 405 VIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
++W AA L LEPE A +V L N+YA + W VRK+M
Sbjct: 542 IVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMM 601
Query: 448 KDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEK 507
++G+K PGCS +E+ +VY F A DKS+ + EI L+ + + GY P+ E
Sbjct: 602 MERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVF 661
Query: 508 VD 509
+D
Sbjct: 662 LD 663
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 41/276 (14%)
Query: 161 AIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
A+ GF+ +N++V I L+S C ++ A K+F+ VV+W +++ + + + +
Sbjct: 161 AVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEE 220
Query: 220 CLELYRMMRN--SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANS 276
L+ M + PN T +LSAC+ L G+ + + I+ G + + N+
Sbjct: 221 SKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENA 280
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH---GLAVRAID---------- 323
LI M+ CG ++ A VF+ M +D++SW S++ G+A LA + D
Sbjct: 281 LIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSW 340
Query: 324 ------------------LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG---KVYFDS 362
LF +M VKPD T + ++++C H G +E G K Y D
Sbjct: 341 TAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYID- 399
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
K+ +K + + ++D+ + G +E+A+ +M
Sbjct: 400 --KNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEM 433
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 108/214 (50%), Gaps = 4/214 (1%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A KVF+E+P +V W +I +++ + + LY++M ++P+ FTF +L T
Sbjct: 88 ARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTK 147
Query: 249 SGALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
AL G+ + GF S + V I ++ CG V A +F+ G ++V+WN
Sbjct: 148 DMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNV 207
Query: 308 MIAGYAQHGLAVRAIDLFEEMMK--QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+++GY + + LF EM K + V P+++T + ++S+C + GK ++ K
Sbjct: 208 VLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIK 267
Query: 366 HGL-KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G+ +P L + ++D+ G ++ AR +M
Sbjct: 268 EGIVEPNLILENALIDMFASCGEMDAARGVFDEM 301
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 97/201 (48%), Gaps = 2/201 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++++++ D+ +K D + + +T+C + G + + + ++G++L
Sbjct: 354 KEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNAL 413
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y KC + A K+F EM ++ +WTA+I A + L ++ M + + P++
Sbjct: 414 IDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDE 473
Query: 237 FTFTSILSACTGSGALGQGRSAHCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T+ ++ ACT G + +G+ ++ G + ++ + + G+++EA+ V
Sbjct: 474 ITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIM 533
Query: 296 NMHGK-DIVSWNSMIAGYAQH 315
NM K + + W S++ H
Sbjct: 534 NMPVKPNSIVWGSLLGACRVH 554
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 6/180 (3%)
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
+ + L L RM+ N+ L + S+L C + Q H QTI+ G S
Sbjct: 15 NLSLSLFLKRMISNTPLHSFVKSPISLLETCNTMYEINQ---IHSQTIKTGLSSNHLFLT 71
Query: 276 SLISMYC--KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+I C + G+V A VF+ + + WN+MI GY++ + + L++ M+ +
Sbjct: 72 KVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNI 131
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG-LKPELDHYSCVVDLLGRAGLLEEAR 392
KPD TF ++ ++ GKV + HG L L + L GL+ AR
Sbjct: 132 KPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYAR 191
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 239/453 (52%), Gaps = 50/453 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + M +++ +++D + + +++C ++ G L IR G + V + ++L
Sbjct: 286 EEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNAL 345
Query: 177 ITLYSKCRVIIDAYKVF-------------------------------EEMPVRNVVSWT 205
I +YS I+DA K+F + MP +++VSW+
Sbjct: 346 IHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWS 405
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
A+I+ +AQ L L+ M+ + P++ S++SACT AL QG+ H +
Sbjct: 406 AVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKN 465
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + + +L+ MY KCG VE A+ VFN M K + SWN++I G A +GL R++D+F
Sbjct: 466 GLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMF 525
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGR 384
EM V P+ ITF+GV+ +CRH GLV+EG+ +F SM KHG++P + HY C+VDLLGR
Sbjct: 526 SEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGR 585
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQL 427
AGLL EA I+ MP+ P+ W A + L+P+ HV L
Sbjct: 586 AGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLL 645
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N++A W+ VR +MK +G+ PGCS IE VV+ F A DK++ ++++ +L
Sbjct: 646 SNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGML 705
Query: 488 DFLVDQMKTLGYVPEVHEEKVD-DASHKRTEPF 519
+ + ++K GY P+ +E +D D K T F
Sbjct: 706 NEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLF 738
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 31/261 (11%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+ +S+I L K +++A+K+F EM +++VSW+A+I+ + Q + L ++ M
Sbjct: 237 NIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMN 296
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ + ++ S+LSAC + G+ H IRMG SY+ + N+LI MY G +
Sbjct: 297 ANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIM 356
Query: 289 EAVYVFNNMHGKDIVSWNSM-------------------------------IAGYAQHGL 317
+A +FN H D +SWNSM I+GYAQH
Sbjct: 357 DAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDC 416
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ LF EM +++PD + VIS+C H +++GK + K+GLK + +
Sbjct: 417 FSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTT 476
Query: 378 VVDLLGRAGLLEEARDFIKQM 398
++D+ + G +E A + M
Sbjct: 477 LLDMYMKCGCVENALEVFNGM 497
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 29/237 (12%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAY--KVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
I TGFI++ + S L+ + I Y ++F+ + N W ++ A+ Q +
Sbjct: 65 ILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEK 124
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L LY++M + + P+++T+ ++ AC G+ H +++GF S + V N+LI+
Sbjct: 125 ALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLIN 184
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV------ 333
MY CGN+ +A +F+ D VSWNS++AGY + G A +F++M ++ +
Sbjct: 185 MYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSM 244
Query: 334 ---------------------KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+ D +++ +IS G+ EE V F M +G++
Sbjct: 245 IVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMR 301
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 261 QTIRMGFFSYIQVANSLISMYCKCG--NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
Q I GF S A+ L+ ++ ++ +F+ + + WN+M+ Y Q A
Sbjct: 63 QMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSA 122
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+A+ L++ M+K V PD T+ V+ +C L GK D + K G ++ + +
Sbjct: 123 EKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTL 182
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+++ G + +AR + P+ ++V W +
Sbjct: 183 INMYAVCGNMRDARKLFDESPVL-DSVSWNS 212
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 232/396 (58%), Gaps = 30/396 (7%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S ++TS G ++ I G L + G +++ GS+LI +YS C + D+ VF+EM V
Sbjct: 464 SASLTSLGLSKQIHG------LMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKV 517
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+++V W ++ + + Q+ + + L L+ ++ S P++FTF +++A +L G+
Sbjct: 518 KDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEF 577
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
HCQ ++ G + N+L+ MY KCG+ E+A F++ +D+V WNS+I+ YA HG
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+A+ + E+MM + ++P+ ITF+GV+S+C H GLVE+G F+ M + G++PE +HY C+
Sbjct: 638 RKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCM 697
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECA 421
V LLGRAG L EAR+ I++MP P A++W AAE +L +P+ +
Sbjct: 698 VSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDS 757
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
+ L+N+YA W A +VR+ MK +G+ PG SWIEI V+ F ++DKS+ + +
Sbjct: 758 GSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKAN 817
Query: 482 EILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
+I VLD L+ Q++ H + ++D R E
Sbjct: 818 QIYEVLDDLLVQIRG-------HMKLINDGRRSRCE 846
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 153/304 (50%), Gaps = 16/304 (5%)
Query: 104 VFDQLLDTPVVDVEKLISMH--HDLHRER-----------LKVDASFLSTAVTSCGSTRN 150
+FD + + ++ L+S + + LH+E LK D S+ +TSC S
Sbjct: 306 LFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHA 365
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G I+ + YV +SLI +Y+KC + +A KVF+ +VV + A+I
Sbjct: 366 LEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEG 425
Query: 211 FAQ---EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
+++ +W++ L ++ MR ++ P+ TF S+L A +LG + H + G
Sbjct: 426 YSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGL 485
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
I ++LI++Y C ++++ VF+ M KD+V WNSM +GY Q A++LF E
Sbjct: 486 NLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLE 545
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
+ R +PD TF+ ++++ + ++ G+ + + K GL+ + ++D+ + G
Sbjct: 546 LQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Query: 388 LEEA 391
E+A
Sbjct: 606 PEDA 609
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 156/332 (46%), Gaps = 17/332 (5%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD L + V +IS + + L + D LST +++C
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPF 264
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ GG +R G + + + LI Y KC + A+K+F+ MP +N++SWT +++
Sbjct: 265 LEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSG 324
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ Q +EL+ M L+P+ F +SIL++C AL G H TI+ +
Sbjct: 325 YKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGND 384
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR---AIDLFEE 327
V NSLI MY KC + EA VF+ D+V +N+MI GY++ G A+++F +
Sbjct: 385 SYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHD 444
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M + ++P +TF+ ++ + + K M K GL ++ S ++ +
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYC 504
Query: 388 LEEARDFIKQMPIYPNAVIWEAAESRLLLEPE 419
L+++R +M + + VIW + S + + E
Sbjct: 505 LKDSRLVFDEMKV-KDLVIWNSMFSGYVQQSE 535
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 147/307 (47%), Gaps = 20/307 (6%)
Query: 104 VFDQLLDTPVVDVEKLISM--HHDLHRERLKVDASF------------LSTAVTSC---- 145
VF+++ + +V ++S HH + E L V F LS+ + +C
Sbjct: 101 VFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLD 160
Query: 146 GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
GS R + Q +++ F +VYVG+ LI Y K I A VF+ +P ++ V+WT
Sbjct: 161 GSGRWMV--FQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWT 218
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
+I+ + + + L+L+ + + P+ + +++LSAC+ L G+ H +R
Sbjct: 219 TMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY 278
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + N LI Y KCG V A +F+ M K+I+SW ++++GY Q+ L A++LF
Sbjct: 279 GHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELF 338
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
M K +KPD +++SC +E G K L + + ++D+ +
Sbjct: 339 TSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398
Query: 386 GLLEEAR 392
L EAR
Sbjct: 399 DCLTEAR 405
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 12/253 (4%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA-----FAQEWQ 216
I +G + Y+ + L+ LYS+ ++ A KVFE+MP RN+V+W+ +++A F +E
Sbjct: 71 IVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESL 130
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT--IRMGFFSYIQVA 274
V + L+ +R +NS PN++ +S + AC+G G+ Q+ ++ F + V
Sbjct: 131 V-VFLDFWRTRKNS---PNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVG 186
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
LI Y K GN++ A VF+ + K V+W +MI+G + G + ++ LF ++M+ V
Sbjct: 187 TLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVV 246
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
PD V+S+C +E GK + ++G + + + ++D + G + A
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKL 306
Query: 395 IKQMPIYPNAVIW 407
MP N + W
Sbjct: 307 FDGMP-NKNIISW 318
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 7/146 (4%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H Q I G ++N L+++Y + G + A VF M +++V+W++M++ HG
Sbjct: 67 HGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFY 126
Query: 319 VRAIDLFEEMMKQRVK-PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH--- 374
++ +F + + R P+ I +C GL G+ + +K D
Sbjct: 127 EESLVVFLDFWRTRKNSPNEYILSSFIQAC--SGLDGSGRWMVFQLQSFLVKSRFDRDVY 184
Query: 375 -YSCVVDLLGRAGLLEEARDFIKQMP 399
+ ++D + G ++ AR +P
Sbjct: 185 VGTLLIDFYLKEGNIDYARLVFDALP 210
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 225/390 (57%), Gaps = 18/390 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+ ++ +A+ + +++C + N G N + ++LI +YSKC +
Sbjct: 222 DEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEK 281
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A+++F+ + +N+ SW AII Q ++ ++LYR M+ ++PN+ T ++LSAC G
Sbjct: 282 AWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAG 341
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
GAL GR H R G + +A +L+ MY KCG +++A +F KD+ WN+M
Sbjct: 342 LGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAM 401
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHG 367
I G A HG ++ +F +M++ V+P+ +TF+GV+S+C H GLVEEG+V F SMA KHG
Sbjct: 402 ILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHG 461
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------A 410
L P+L+HY+C+VDLLGRAG L+EA + ++ M I P+++IW A +
Sbjct: 462 LSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKIS 521
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
E+ + + + L+N+YA W ARVR+ +K+K +K GCSW+E+ VV+RF
Sbjct: 522 ETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRF 581
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
ED ++ + EI + LV+ +K GYV
Sbjct: 582 VVEDTTHLKSGEIYGAYEILVNHLKAEGYV 611
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 38/286 (13%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C + ++ G +R GF ++++V +SLI +Y KC + A +++M R+
Sbjct: 100 LKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDE 159
Query: 202 VSWTAIIAAFAQEWQVDMCLELYR---MMRNSM--------------------------- 231
VSW +II+ + Q QV+ +L+ M RN +
Sbjct: 160 VSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLV 219
Query: 232 ----LEPNDFTFTSILSACTGSGALGQGR--SAHCQTIRMGFFSYIQVANSLISMYCKCG 285
++PN T +LSAC+ GR S ++ + + A LI MY KCG
Sbjct: 220 SADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTA--LIDMYSKCG 277
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
+VE+A +F+ + K++ SWN++I G Q GL AIDL+ M Q VKP+ IT + V+S
Sbjct: 278 DVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLS 337
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+C G +E G+ + ++GL + + +VD+ + G +++A
Sbjct: 338 ACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDA 383
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 82/141 (58%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
V ++ P SW ++I A+ L LY M S +P++FTF +L AC+ G+
Sbjct: 49 VLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGS 108
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ +G H +R+GF S + V NSLI MYCKC ++ A +++M +D VSWNS+I+G
Sbjct: 109 VLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISG 168
Query: 312 YAQHGLAVRAIDLFEEMMKQR 332
Y Q G +A DLFEEM +R
Sbjct: 169 YVQWGQVEKARDLFEEMPMRR 189
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E+ I ++ + + +K + L +++C + G R G NV + ++
Sbjct: 310 LEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATA 369
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
L+ +Y+KC I DA +F + ++V W A+I A L ++ M + ++PN
Sbjct: 370 LVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPN 429
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
D TF +LSAC SG + +GR + G ++ ++ + + G+++EA +
Sbjct: 430 DVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELV 489
Query: 295 NNMH-GKDIVSWNSMIAGYAQH 315
NM D + W ++++ H
Sbjct: 490 QNMLIPPDSIIWGALLSACRIH 511
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 26/224 (11%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+LS + +L Q H QT+ G + LI ++ +++ A +V +
Sbjct: 2 LLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLH----SIDYARFVLDQTPSPT 57
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
SWNS+I Y HG ++ L+ +M++ KP TF V+ +C G V EG+
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECA 421
+ + G +L + ++D+ + L+ AR+F M + + V W +
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMG-FRDEVSWNS------------ 164
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
+ +G W Q + R L ++ ++ N C W ++N
Sbjct: 165 --------IISGYVQWGQVEKARDLFEEMPMRRNVVC-WTAMIN 199
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 212/355 (59%), Gaps = 18/355 (5%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ +V V ++++T Y K + A ++F+ M V+N+V+W ++IA + + + + L++++
Sbjct: 226 MKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKT 285
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M S + PN + +S+L C+ AL GR H + SLISMYCKCG+
Sbjct: 286 MIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGD 345
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A +F M KD++SWN+MI+GYAQHG +A+ LF++M +KPD ITF+ VI +
Sbjct: 346 LDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILA 405
Query: 347 CRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
C H G V+ G YF SM K G++ + HY+CV+DLLGRAG L+EA IK+MP P+A
Sbjct: 406 CNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAA 465
Query: 406 IWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMK 448
I+ AA + L L+P A +VQLAN+YA WDQ A+VRK+MK
Sbjct: 466 IYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMK 525
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ + PG SWIEI +V + FR+ D+ + L+ I L+ L +MK GYVP++
Sbjct: 526 EHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDL 580
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 117/234 (50%), Gaps = 9/234 (3%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++ Y + + A F +MPV+++ SW +I+ FAQ Q+ +L+ +M E N
Sbjct: 142 MLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKN 197
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++++++S G L + +G S + V ++++ Y K G VE A +F
Sbjct: 198 GVSWSAMISGYVEHGDLEAAEELYKN---VGMKSVV-VETAMLTGYMKFGKVELAERIFQ 253
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M K++V+WNSMIAGY ++ A + +F+ M++ RV+P+ ++ V+ C + +
Sbjct: 254 RMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPL 313
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ ++K L + + ++ + + G L+ A +MP + + W A
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVISWNA 366
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
R++ + LS+ + C + + G L ++ + +SLI++Y KC + A
Sbjct: 290 RVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSA 349
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
+K+F EMP ++V+SW A+I+ +AQ L L+ MRN ++P+ TF +++ AC +
Sbjct: 350 WKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHA 409
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVAN--SLISMYCKCGNVEEAVYVFNNM 297
G + G + ++++ F + + +I + + G ++EAV + M
Sbjct: 410 GFVDLG-VQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEM 458
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 59/227 (25%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A VFE+M VR V+W +++ + + +V EL+ + + EP+ ++
Sbjct: 92 ARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELF----DKIPEPDSVSY-------- 139
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
N ++ Y + VE A+ FN M KDI SWN+
Sbjct: 140 ---------------------------NIMLVCYLRSYGVEAALAFFNKMPVKDIASWNT 172
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
+I+G+AQ+G +A DLF M ++ GV S G VE G D A
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEKN---------GVSWSAMISGYVEHG----DLEAAEE 219
Query: 368 LKPELDHYSCVVD---LLG--RAGLLEEARDFIKQMPIYPNAVIWEA 409
L + S VV+ L G + G +E A ++M + N V W +
Sbjct: 220 LYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAV-KNLVTWNS 265
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 216/405 (53%), Gaps = 18/405 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ E + M +H L + +C + G L ++ GF VYV S
Sbjct: 301 NAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKS 360
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC I DA + F + ++V WTA++ Q + + L LY M + P
Sbjct: 361 ALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFP 420
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T TS+L AC G AL G+ H Q ++ GF V ++L +MY KCGN+E+ + VF
Sbjct: 421 NTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVF 480
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +D+++WNS+I+G++Q+G AI+LFEEM + PD +TF+ V+ +C H GLV+
Sbjct: 481 RRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVD 540
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
G YF SM K +GL P LDHY+C+VD+L RAG+L EA+DFI+ + I +W
Sbjct: 541 RGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGA 600
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A E + L +A ++ L+N+YA R W+ RVR LMK G+ +P
Sbjct: 601 CRSLRDFDVGAYAGEKLMDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDP 660
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
GCSW+E+ + V+ F ++ + I L L MK GY P
Sbjct: 661 GCSWVELNSRVHVFVVGEQQHPDAEIINTELRRLGKHMKDEGYNP 705
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 135/243 (55%), Gaps = 2/243 (0%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-M 226
+NV+V ++L+ +Y K +I DA VF+EMP RN VSW A++A +A EL+R M
Sbjct: 151 SNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQM 210
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
+ L N+F T++LSA + L G H ++ G ++ V NSL++MY K G
Sbjct: 211 LGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGC 270
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A +VF + ++ ++W++MI GY+Q+G A A+ +F +M P T +GV+++
Sbjct: 271 MDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNA 330
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
C G + EGK M K G + ++ S +VD+ + G + +A++ Q + V+
Sbjct: 331 CSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSEL-DIVL 389
Query: 407 WEA 409
W A
Sbjct: 390 WTA 392
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 141/274 (51%), Gaps = 2/274 (0%)
Query: 137 FLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
F++TAV S S + G L ++ G + V V +SL+T+Y+K + A+ VFE
Sbjct: 221 FVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFES 280
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
RN ++W+A+I ++Q + + ++ M + P +FT +L+AC+ G L +G
Sbjct: 281 SKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEG 340
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ AH +++GF + V ++L+ MY KCG + +A FN DIV W +M+ G+ Q+
Sbjct: 341 KQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQN 400
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G +A+ L+ M K+ V P+ +T ++ +C +E GK + K G
Sbjct: 401 GEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVG 460
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S + + + G LE+ ++MP + + + W +
Sbjct: 461 SALSTMYSKCGNLEDGMVVFRRMP-HRDVIAWNS 493
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 113/229 (49%), Gaps = 17/229 (7%)
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKC-RVIID-AYKVFEEMP--VRNVVSWTAI 207
R G A+++G ++ V +SLIT YS R+ + A+ VF ++P R+V SW ++
Sbjct: 29 RDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSL 88
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM-G 266
+ + + M+ +S + P+ +F + +A + + G H ++
Sbjct: 89 LNPLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPS 148
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
S + V+ +L++MYCK G + +A VF+ M ++ VSW +M+AGYA + A +LF
Sbjct: 149 ASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFR 208
Query: 327 EMMKQ-RVKPDAITFLGVISSCR-----------HGGLVEEGKVYFDSM 363
+M+ + + + V+S+ HG +V++G V F S+
Sbjct: 209 QMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSV 257
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 212/347 (61%), Gaps = 20/347 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNS 230
V ++L++ Y+K ++ A K+FEEMP RNVVSWTA+++ +AQ + + +E + M +
Sbjct: 155 VYNALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERA 214
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
++PN+ T +S+L AC GA+ GR G + VAN+L+ MY KCG++ +A
Sbjct: 215 GVQPNELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQA 274
Query: 291 VYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
VF + +D+ SWNSMI +A HGL A+ LF ++ VKPD ITF+GVI +C H
Sbjct: 275 WQVFQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTH 334
Query: 350 GGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW- 407
GGLV EGK++FDSM A+ LKP ++HY C+VDLLGRAGLL E+ I MP+ P+AVIW
Sbjct: 335 GGLVNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWG 394
Query: 408 ---------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKG 451
E A +L+ LEP+ A V L+N+YA WD A+V KL+K+K
Sbjct: 395 ALLGACSFHGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKD 454
Query: 452 LKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
K + G S+IE+ +++F EDKS+ R E+ L+ + MK +G
Sbjct: 455 HKKSAGYSFIELDGTMHKFLVEDKSHPRFEEVYNTLNSVTMTMKLVG 501
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 216/391 (55%), Gaps = 26/391 (6%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D+S T + S G C I+ GF +NVYV ++L+ +Y C + DA +VF
Sbjct: 141 DSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVF 200
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+E+P RN+VSW A+I + ++++R M+ + +P + T +L AC GAL
Sbjct: 201 DEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALN 260
Query: 254 QGR----SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
QGR +R+ F V +LI MY KCG V+EA +F M K++ +WN +I
Sbjct: 261 QGRWIDDYIDHNRLRLNVF----VGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLI 316
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GL 368
+GYA +G A+ F M+ ++ KPD +TFLGV+ +C H GLV EG+ YF SM + GL
Sbjct: 317 SGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGL 376
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAES 412
+P ++HY C+VDLLGRAG L+EA+ I+ M + P+ +IW E A
Sbjct: 377 RPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIK 436
Query: 413 RLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
+LL LEP +V LANLYA + WD+ VR++M + ++ PGCS IEI NVVY F
Sbjct: 437 KLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNVVYEFV 496
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ E+ +L + ++K GYV +
Sbjct: 497 VSNYIKPGFEEVYKLLADMNKKLKLAGYVAD 527
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 102/185 (55%), Gaps = 1/185 (0%)
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
+Y M + + P+ TF ++L + G++ HC I+MGF S + V+ +L++MY
Sbjct: 129 IYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYG 188
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
C +V +A VF+ + ++IVSWN++I GY + + + ID+F EM KP +T +G
Sbjct: 189 TCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVG 248
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
V+ +C H G + +G+ D + + L+ + + ++D+ + G+++EA K M +
Sbjct: 249 VLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRV-K 307
Query: 403 NAVIW 407
N W
Sbjct: 308 NVYTW 312
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 212/347 (61%), Gaps = 20/347 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNS 230
V ++L++ Y+K ++ A K+FEEMP RNVVSWTA+++ +AQ + + +E + M +
Sbjct: 155 VYNALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERA 214
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
++PN+ T +S+L AC GA+ GR G + VAN+L+ MY KCG++ +A
Sbjct: 215 GVQPNELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQA 274
Query: 291 VYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
VF + +D+ SWNSMI +A HGL A+ LF ++ VKPD ITF+GVI +C H
Sbjct: 275 WQVFQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTH 334
Query: 350 GGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW- 407
GGLV EGK++FDSM A+ LKP ++HY C+VDLLGRAGLL E+ I MP+ P+AVIW
Sbjct: 335 GGLVNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWG 394
Query: 408 ---------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKG 451
E A +L+ LEP+ A V L+N+YA WD A+V KL+K+K
Sbjct: 395 ALLGACSFHGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKD 454
Query: 452 LKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
K + G S+IE+ +++F EDKS+ R E+ L+ + MK +G
Sbjct: 455 HKKSAGYSFIELDGTMHKFLVEDKSHPRFEEVYNTLNSVTMTMKLVG 501
>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
Length = 638
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 229/402 (56%), Gaps = 22/402 (5%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D +K + +LH + D+S L+T + C RN+ G L I+ G+ V +G+
Sbjct: 223 DGKKAVDTFMELHLCGVNFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGT 282
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF---AQEWQVDMCLELYRMMRNSM 231
+L+ LY+KC ++ A VF+ + + + S+ AI+A F +++ + D + L+ R
Sbjct: 283 ALVDLYAKCGNLMSARMVFDGLSSKRIASFNAILAGFMENSRDGEEDPIV-LFNHFRLDG 341
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
++P+ TF+ +LS LG+GR H I+ GF + + VAN++I+MY KCG++EEA
Sbjct: 342 IKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAH 401
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+FN M+ D +SWN+MI+ YA HG + + LFEEM+K+ PD IT L ++ +C + G
Sbjct: 402 RMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSG 461
Query: 352 LVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-- 408
L +G F+ M K+G+KP L+HY+C+VDLLGRAG L EA D I + P + ++W
Sbjct: 462 LFRDGISLFNVMEPKYGIKPLLEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTL 521
Query: 409 ---------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
A++ L L P A +++ ++N+YAG R D+AA+VR +M D L
Sbjct: 522 VNVCKLCGDRNFGKLASKYLLELSPVEAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLS 581
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
G SWIEI + V+ F A K + +EI LD L D M+
Sbjct: 582 KEAGTSWIEIDDKVHHFVASGKDHPESNEIYAELDLLRDDMR 623
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 145/278 (52%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ E +++ ++H+ ++ S + +C S G + C I+ GF NV VG+
Sbjct: 21 EFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQFHCFVIKCGFDENVVVGT 80
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SLI +Y++ ++ DA KVF+ M ++V + +I +A+ + + ++ M N+ L+P
Sbjct: 81 SLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGNGEKAIRVFINMLNAGLQP 140
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
ND+TFT+I+SAC G + +G + + GF + + N++I+MY K G EA +F
Sbjct: 141 NDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAIINMYGKKGMAREAERMF 200
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M ++++SW ++I+GY + G +A+D F E+ V D+ ++ C +E
Sbjct: 201 SAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTTILDGCSECRNLE 260
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G + K G ++ + +VDL + G L AR
Sbjct: 261 LGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSAR 298
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 146/307 (47%), Gaps = 3/307 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK I + ++ L+ + + +++C I G + L+ + GF+ +G+++
Sbjct: 124 EKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAI 183
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y K + +A ++F M RN++SWTA+I+ + + ++ + + + +
Sbjct: 184 INMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDS 243
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T+IL C+ L G H I++G+ + + +L+ +Y KCGN+ A VF+
Sbjct: 244 SLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDG 303
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVR--AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ K I S+N+++AG+ ++ I LF +KPD +TF ++S + +
Sbjct: 304 LSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLG 363
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
G+ Y K G + +L + V+ + + G +EEA M + +++ W A S
Sbjct: 364 RGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDH-DSISWNAMISAY 422
Query: 415 LLEPECA 421
L + A
Sbjct: 423 ALHGQGA 429
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 1/214 (0%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
M VRN ++WT++I + + + + L + M S N+ T + IL AC+ G
Sbjct: 1 MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ HC I+ GF + V SLI+MY + +A VF++M KD+ +N MI YA+
Sbjct: 61 QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G +AI +F M+ ++P+ TF +IS+C +EEG+ + K+G E
Sbjct: 121 GNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIG 180
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++++ G+ G+ EA M N + W A
Sbjct: 181 NAIINMYGKKGMAREAERMFSAMTD-RNLISWTA 213
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 264/539 (48%), Gaps = 71/539 (13%)
Query: 40 SSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTF 99
+SS SL + ++ R + ++H +++ L ++ L H + G +
Sbjct: 47 TSSFSLPSHSTFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLG--PLIHSYIGCRNLS 104
Query: 100 GSSNVFDQLLDTPVVDV---------------EKLISMHHDL-HRERLKVDASFLSTAVT 143
+ VFDQ P + E L H L H D + T
Sbjct: 105 FARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFT 164
Query: 144 SCGSTRNIRG-GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+C +RG G + ++ G+ ++++VG+SL+ +YS ++DA +VF+EMP R+V+
Sbjct: 165 ACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVI 224
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMR---------------------------NSML--- 232
+WT+++ +A ++ EL+ MM N ML
Sbjct: 225 TWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHD 284
Query: 233 --EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+PN+ SILSAC GAL QG+ H + ++ +LI MY KCG ++ A
Sbjct: 285 EVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCA 344
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF+ +H +D+++W SMI+G + HGL + F EM+ + KPD IT LGV++ C H
Sbjct: 345 RRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHS 404
Query: 351 GLVEEG-KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GLVEEG ++ D + G+ P+L+HY C++DLLGRAG LE A + IK MP+ P+ V W A
Sbjct: 405 GLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRA 464
Query: 410 AESRLLLEPE--------------CAATH----VQLANLYAGVRCWDQAARVRKLMKDKG 451
S + + C +H V L+NLYA + W+ +VRK M +G
Sbjct: 465 LLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRG 524
Query: 452 LKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL-GYVPEVHEEKVD 509
+ PGCSWIEI VV+ F A DK + R+SEI L+ ++ ++ GYVP + D
Sbjct: 525 SEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFD 583
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 223/399 (55%), Gaps = 22/399 (5%)
Query: 126 LHRERL-KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
LHR L D + +C +R G A + G ++ V+V +SL+ LY C
Sbjct: 112 LHRRHLAPPDTHTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACG 171
Query: 185 VIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
+ A++VF+E+P RN+VSW +++ FA + + L ++R M P+ FT S+
Sbjct: 172 LFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSV 231
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKD 301
L+AC G L GR H ++G N+LI +Y KCG V++A +F M G+
Sbjct: 232 LTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRT 291
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+VSW S+I G A +G + A+ LF M ++++ P IT +GV+ +C H GLV++G YFD
Sbjct: 292 VVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFD 351
Query: 362 SM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------- 407
M A++G+ P ++H C+VDLLGRAG +EEA ++I MP+ PNAV+W
Sbjct: 352 QMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKL 411
Query: 408 ---EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
EAA +RL+ L+P + +V L+NLYAGV W +RK M G++ NPG S +E+
Sbjct: 412 EIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVEL 471
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
N VY F D+S+ +I +L + ++++ GY+P
Sbjct: 472 RNSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYIPH 510
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 210/390 (53%), Gaps = 17/390 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + D + + +C + R G LA++ G + YV +LI +Y++C
Sbjct: 127 EGVAPDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARA 186
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F VVS+ A+IAA + + L L+R M+ L+P T S+LSAC
Sbjct: 187 ARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACAL 246
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
GAL GR H ++G S ++V+ +LI MY KCG++E+A+ VF M KD +W+ M
Sbjct: 247 LGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVM 306
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I YA HG AI LFEEM K+ +KPD ITFLGV+ +C H GLV EG YFD M HG+
Sbjct: 307 IVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKDHGI 366
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA-----------------E 411
P + HY CV DLL R+G LE A FI ++PI P ++W E
Sbjct: 367 VPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFE 426
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
L L+ +V +NL A W++ VRKLM +KG+ PGCS IEI N V+ F
Sbjct: 427 RILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFF 486
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
A D + + E ++D ++DQ+K +GYVP
Sbjct: 487 AGDGRHPKSQEARKMVDEVIDQLKLVGYVP 516
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%), Gaps = 6/216 (2%)
Query: 189 AYKVFEEMP-VRNVVSWTAIIAAFAQEW-----QVDMCLELYRMMRNSMLEPNDFTFTSI 242
A +VF+ +P + V + ++ +A+ + + ++ M + P+ +TF S+
Sbjct: 80 ARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVSL 139
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
L AC + A +GR AH +++G + V +LI+MY +CG+ A +F G +
Sbjct: 140 LKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCV 199
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
VS+N+MIA + A+ LF EM + +KP ++T + V+S+C G +E G+ D
Sbjct: 200 VSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWVHDY 259
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ K GL + + ++D+ + G LE+A D + M
Sbjct: 260 VRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGM 295
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 232/430 (53%), Gaps = 53/430 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H L D L + SC + G +R G + YVG+SLI +Y KC V
Sbjct: 98 MHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGV 157
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RN-------------- 229
I DA K+F++M VR++ SW A+IA + +E ++ + +L+ M RN
Sbjct: 158 IGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQN 217
Query: 230 -----------------SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
S ++PN T S+L AC S AL +GR H +G
Sbjct: 218 GFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSS 277
Query: 273 VANSLISMYCKCGNVEEAVYVFNNM--HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V +L MY KC ++ EA F+ + +GK++++WN+MI YA HG V A+ +FE M++
Sbjct: 278 VQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLR 337
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
V+PDA+TF+G++S C H GL++ G +F+ M H ++P ++HY+CVVDLLGRAG L
Sbjct: 338 AGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLV 397
Query: 390 EARDFIKQMPIYPNAVIW----------------EAAESRL-LLEPECAATHVQLANLYA 432
EA++ I QMP+ +W E A RL +LEP+ + +V L+NLYA
Sbjct: 398 EAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYA 457
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
W++ ++R L+K +G+K +PGCSWIEI + F DKS+ + EI L+ L +
Sbjct: 458 EAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPE 517
Query: 493 QMKTLGYVPE 502
++K GY+P+
Sbjct: 518 KIKMAGYIPD 527
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
LE Y M L ++FT +L +C + GR H Q +R+G V SLI M
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KCG + +A +F+ M +D+ SWN++IAGY + G A DLFE M + + +++
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNI----VSW 207
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHG--LKPELDHYSCVVDLLGRAGLLEEAR---DFI 395
+IS G E+ FD M + G +KP V+ ++ LE R DF
Sbjct: 208 TAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFA 267
Query: 396 KQMPIYPNAVIWEA-----AESRLLLEPEC 420
+ ++ N+ + A A+ L+E C
Sbjct: 268 NGIGLHLNSSVQTALAGMYAKCYSLVEARC 297
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 226/409 (55%), Gaps = 21/409 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++ ++ R + + S + T +++C + ++ G + G +N+ + ++L
Sbjct: 246 EEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNAL 305
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKC + A +FE + ++++SW +I ++ L L+R M+ S +EPND
Sbjct: 306 IDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPND 365
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA--NSLISMYCKCGNVEEAVYVF 294
TF SIL AC GAL G+ H I F + SLI MY KCGN+E A VF
Sbjct: 366 VTFVSILPACAYLGALDLGKWIHAY-IDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVF 424
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M K + SWN+MI+G A HG A A++LF +M + +PD ITF+GV+S+C H GLVE
Sbjct: 425 AGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVE 484
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
G+ F SM + + + P+L HY C++DLLGRAGL +EA +K M + P+ IW
Sbjct: 485 LGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGA 544
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AA+ LEPE +V L+N+YA WD AR+R + DKG+K P
Sbjct: 545 CRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVP 604
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
GCS IE+ +VV+ F DK + + +I +LD + ++ G+VP+ E
Sbjct: 605 GCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSE 653
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 129/226 (57%), Gaps = 1/226 (0%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LIT Y+ + DA ++FEE+PVR+ VSW A+IA +AQ + + L ++ M+ + +
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN+ T ++LSAC SG+L G G S +++ N+LI MY KCG++++A +
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDL 321
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F + KDI+SWN MI GY+ A+ LF +M + V+P+ +TF+ ++ +C + G +
Sbjct: 322 FEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGAL 381
Query: 354 EEGKVYFDSMAKHGLK-PELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ GK + K L ++ ++D+ + G +E A+ M
Sbjct: 382 DLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM 427
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 127/290 (43%), Gaps = 36/290 (12%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMP 197
T +++C S +N++ I+TG + S LI S + A +FE +
Sbjct: 37 TLLSTCKSFQNLK---QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
N W +I + ++ Y M +EPN +TF +L +C GA +G+
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGN------------------------------- 286
H +++G S V SLI+MY + G
Sbjct: 154 IHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGC 213
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+++A +F + +D VSWN+MIAGYAQ G A+ F+EM + V P+ T + V+S+
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
C G +E G + HGL L + ++D+ + G L++ARD +
Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFE 323
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 212/355 (59%), Gaps = 18/355 (5%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ +V V ++++T Y K + A ++F+ M V+N+V+W ++IA + + + + L++++
Sbjct: 226 MKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKT 285
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M S + PN + +S+L C+ AL GR H + SLISMYCKCG+
Sbjct: 286 MIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGD 345
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A +F M KD+++WN+MI+GYAQHG +A+ LF++M +KPD ITF+ VI +
Sbjct: 346 LDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILA 405
Query: 347 CRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
C H G V+ G YF SM K G++ + HY+CV+DLLGRAG L+EA IK+MP P+A
Sbjct: 406 CNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAA 465
Query: 406 IWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMK 448
I+ AA + L L+P A +VQLAN+YA WDQ A+VRK+MK
Sbjct: 466 IYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMK 525
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ + PG SWIEI +V + FR+ D+ + L+ I L+ L +MK GYVP++
Sbjct: 526 EHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDL 580
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 117/234 (50%), Gaps = 9/234 (3%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++ Y + + A F +MPV+++ SW +I+ FAQ Q+ +L+ +M E N
Sbjct: 142 MLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKN 197
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++++++S G L + +G S + V ++++ Y K G VE A +F
Sbjct: 198 GVSWSAMISGYVEHGDLEAAEELYKN---VGMKSVV-VETAMLTGYMKFGKVELAERIFQ 253
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M K++V+WNSMIAGY ++ A + +F+ M++ RV+P+ ++ V+ C + +
Sbjct: 254 RMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPL 313
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ ++K L + + ++ + + G L+ A +MP + + W A
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVITWNA 366
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
R++ + LS+ + C + + G L ++ + +SLI++Y KC + A
Sbjct: 290 RVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSA 349
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
+K+F EMP ++V++W A+I+ +AQ L L+ MRN ++P+ TF +++ AC +
Sbjct: 350 WKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHA 409
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVAN--SLISMYCKCGNVEEAVYVFNNM 297
G + G + ++++ F + + +I + + G ++EAV + M
Sbjct: 410 GFVDLG-VQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEM 458
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 59/227 (25%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A VFE+M VR V+W +++ + + +V EL+ + + EP+ ++
Sbjct: 92 ARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELF----DKIPEPDSVSY-------- 139
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
N ++ Y + V+ A+ FN M KDI SWN+
Sbjct: 140 ---------------------------NIMLVCYLRSYGVKAALAFFNKMPVKDIASWNT 172
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
+I+G+AQ+G +A DLF M ++ GV S G VE G D A
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEKN---------GVSWSAMISGYVEHG----DLEAAEE 219
Query: 368 LKPELDHYSCVVD---LLG--RAGLLEEARDFIKQMPIYPNAVIWEA 409
L + S VV+ L G + G +E A ++M + N V W +
Sbjct: 220 LYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAV-KNLVTWNS 265
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 234/409 (57%), Gaps = 23/409 (5%)
Query: 117 EKLISMHHDLHRERLKVD----ASF-LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVY 171
E+ +++ DL E LK D AS L+TA +CG + G AI+ GF ++++
Sbjct: 369 EESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLH 428
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
V S ++ +Y KC +++A VF + + V+WT++I+ D L +Y MR S
Sbjct: 429 VNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSR 488
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+++TF +++ A + AL QGR H I++ S V SL+ MY KCGN+E+A
Sbjct: 489 VMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAY 548
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F M+ ++I WN+M+ G AQHG A A++LF+ M ++PD ++F+G++S+C H G
Sbjct: 549 RLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 608
Query: 352 LVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA- 409
L E Y SM +G++PE++HYSC+VD LGRAGL++EA I+ MP +A I A
Sbjct: 609 LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRAL 668
Query: 410 ---------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
+RL LEP +A +V L+N+YA WD RK+MK K +K
Sbjct: 669 LGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVK 728
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+PG SWI++ N+++ F +D+S+ + I ++ ++ ++ GYVP+
Sbjct: 729 KDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPD 777
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 142/289 (49%), Gaps = 15/289 (5%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
L TA+ ST N+ G + +G + ++ ++L+T+YSKC + A +VF+
Sbjct: 83 LLRTAI----STHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTT 138
Query: 197 PVRNVVSWTAIIAAFA-----QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
P R++V+W AI+ A+A + L L+R++R S+ T +L C SG
Sbjct: 139 PERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 198
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L H I++G + V+ +L+++Y KCG + +A +F+ M +D+V WN M+ G
Sbjct: 199 LWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKG 258
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL--VEEGKVYFDSMAKHGLK 369
Y Q GL A LF E + ++PD + +++ C G +E GK K GL
Sbjct: 259 YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLD 318
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAAESRL 414
++ + +V++ + G AR+ M I N++I A+S L
Sbjct: 319 SDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSL 367
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 147/292 (50%), Gaps = 8/292 (2%)
Query: 125 DLHRERLKVDASFLSTAVTSC--GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
+ HR L+ D + + C T ++ G +A+++G ++V V +SL+ +YSK
Sbjct: 274 EFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSK 333
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
A +VF +M +++SW ++I++ AQ + + L+ + + L+P+ FT SI
Sbjct: 334 MGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASI 393
Query: 243 L-----SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
AC L QG+ H I+ GF S + V + ++ MY KCG++ A VFN +
Sbjct: 394 TLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYI 453
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
D V+W SMI+G +G +A+ ++ M + RV PD TF +I + +E+G+
Sbjct: 454 SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGR 513
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ K + + +VD+ + G +E+A K+M + N +W A
Sbjct: 514 QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNV-RNIALWNA 564
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 8/254 (3%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
AI+ G +V+V +L+ +YSKC + DA +F+ M R+VV W ++ + Q
Sbjct: 209 AIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEA 268
Query: 221 LELYRMMRNSMLEPNDFTFTSILSAC--TGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+L+ S L P++F+ IL+ C G+ L G+ H ++ G S + VANSL+
Sbjct: 269 FQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLV 328
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD-- 336
+MY K G A VFN+M D++SWNSMI+ AQ L +++LF +++ + +KPD
Sbjct: 329 NMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHF 388
Query: 337 ---AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+IT +C L+++GK K G +L S ++D+ + G + A
Sbjct: 389 TLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGI 448
Query: 394 FIKQMPIYPNAVIW 407
+ P+ V W
Sbjct: 449 VFNYISA-PDDVAW 461
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/336 (41%), Positives = 202/336 (60%), Gaps = 23/336 (6%)
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQE---WQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
++FEEMP RNV SW +I +A ++V C + RM+ + ++ PND T ++LSAC
Sbjct: 314 QLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFK--RMLIDGLVVPNDATLVTVLSACA 371
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
GAL G+ H +GF I V N+LI MY KCG +E A+ VF +M KD+++WNS
Sbjct: 372 RLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNS 431
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KH 366
MI G A HG A+ LF +M KPD ITF+GV+ SC H GLVEEG YF+SM ++
Sbjct: 432 MICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEY 491
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------A 409
+ P+++HY C+VDL GRAGLL+ A +F+K+MP+ +AVIW A
Sbjct: 492 SIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELA 551
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
+ ++LEP+ A +V L+N+Y + W AR++ LM+D G K PGCS IE+ + V
Sbjct: 552 LQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVE 611
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
F + D+ +++ EI VL L+ +++ GY P + E
Sbjct: 612 FYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNMME 647
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 25/324 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS---MHHDLHRERLKVDASFLSTAV-----------TSCG 146
+ ++FD D P V++ IS H+ +RE + + S V SC
Sbjct: 118 ARHLFDHFPD-PKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCA 176
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
G C I+ G N +V ++LI +YS R I AYK+F M RN+V+WT+
Sbjct: 177 KIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTS 236
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I+ + +V + L+ + D +I+ +G +G ++A M
Sbjct: 237 MISGYILCNRVALARRLF-----DLAPERDVVLWNIM--VSGYIEIGDMKAARKLFDTMP 289
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ + N++++ Y G+VE +F M +++ SWN +I GYA +G + F+
Sbjct: 290 YRDTMS-WNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFK 348
Query: 327 EMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
M+ V P+ T + V+S+C G ++ GK A G K + + ++D+ +
Sbjct: 349 RMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKC 408
Query: 386 GLLEEARDFIKQMPIYPNAVIWEA 409
GL+E A + + M + + + W +
Sbjct: 409 GLIENAMEVFESMDL-KDLITWNS 431
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 18/247 (7%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
Q I GF N YV +++T + + + A +F+ P V W AI +
Sbjct: 87 QAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFY 146
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+ L+ M++ + PN FTF +L +C GA +G HC+ I+ G VA +L
Sbjct: 147 REVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTL 206
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA---QHGLAVRAIDLFEEMMKQRVK 334
I +Y + A +F M ++IV+W SMI+GY + LA R DL E
Sbjct: 207 IDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPER------ 260
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA--GLLEEAR 392
D + + ++S G ++ + FD+M P D S L G A G +E
Sbjct: 261 -DVVLWNIMVSGYIEIGDMKAARKLFDTM------PYRDTMSWNTMLNGYANNGDVEACE 313
Query: 393 DFIKQMP 399
++MP
Sbjct: 314 QLFEEMP 320
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 4/178 (2%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F S+L +C L + Q I GF VA ++++ + + A ++F++
Sbjct: 70 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 126
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ WN++ GY + + LF +M V+P+ TF V+ SC G EG+
Sbjct: 127 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 186
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ K GL+ + ++D+ + A M + N V W + S +L
Sbjct: 187 IHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGM-LERNIVAWTSMISGYIL 243
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/336 (41%), Positives = 202/336 (60%), Gaps = 23/336 (6%)
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQE---WQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
++FEEMP RNV SW +I +A ++V C + RM+ + ++ PND T ++LSAC
Sbjct: 272 QLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFK--RMLIDGLVVPNDATLVTVLSACA 329
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
GAL G+ H +GF I V N+LI MY KCG +E A+ VF +M KD+++WNS
Sbjct: 330 RLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNS 389
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KH 366
MI G A HG A+ LF +M KPD ITF+GV+ SC H GLVEEG YF+SM ++
Sbjct: 390 MICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEY 449
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------A 409
+ P+++HY C+VDL GRAGLL+ A +F+K+MP+ +AVIW A
Sbjct: 450 SIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELA 509
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
+ ++LEP+ A +V L+N+Y + W AR++ LM+D G K PGCS IE+ + V
Sbjct: 510 LQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVE 569
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
F + D+ +++ EI VL L+ +++ GY P + E
Sbjct: 570 FYSLDERHSQSKEIYGVLKGLMKLLRSFGYGPNMME 605
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 149/333 (44%), Gaps = 25/333 (7%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLIS---MHHDLHRERLKVDASFLSTAV------ 142
+ G + ++FD D P V++ IS H+ +RE + + S V
Sbjct: 67 WVGLKQMAHARHLFDHFPD-PKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFT 125
Query: 143 -----TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
SC G C I+ G N +V ++LI +YS R I AYK+F M
Sbjct: 126 FPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGML 185
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN+V+WT++I+ + +V + L+ + D +I+ +G +G ++
Sbjct: 186 ERNIVAWTSMISGYILCNRVALARRLF-----DLAPERDVVLWNIM--VSGYIEIGDMKA 238
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
A M + + N++++ Y G+VE +F M +++ SWN +I GYA +G
Sbjct: 239 ARKLFDTMPYRDTMS-WNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGC 297
Query: 318 AVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+ F+ M+ V P+ T + V+S+C G ++ GK A G K + +
Sbjct: 298 FFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGN 357
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ + GL+E A + + M + + + W +
Sbjct: 358 ALIDMYSKCGLIENAMEVFESMDL-KDLITWNS 389
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 18/247 (7%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
Q I GF N YV +++T + + + A +F+ P V W AI +
Sbjct: 45 QAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFY 104
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+ L+ M++ + PN FTF +L +C GA +G HC+ I+ G VA +L
Sbjct: 105 REVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTL 164
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA---QHGLAVRAIDLFEEMMKQRVK 334
I +Y + A +F M ++IV+W SMI+GY + LA R DL E
Sbjct: 165 IDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPER------ 218
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA--GLLEEAR 392
D + + ++S G ++ + FD+M P D S L G A G +E
Sbjct: 219 -DVVLWNIMVSGYIEIGDMKAARKLFDTM------PYRDTMSWNTMLNGYANNGDVEACE 271
Query: 393 DFIKQMP 399
++MP
Sbjct: 272 QLFEEMP 278
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 4/178 (2%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F S+L +C L + Q I GF VA ++++ + + A ++F++
Sbjct: 28 FISLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 84
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ WN++ GY + + LF +M V+P+ TF V+ SC G EG+
Sbjct: 85 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 144
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ K GL+ + ++D+ + A M + N V W + S +L
Sbjct: 145 IHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGM-LERNIVAWTSMISGYIL 201
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 224/390 (57%), Gaps = 31/390 (7%)
Query: 151 IRGGAPYQCLAI-----RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
++ G P C + +G + + S++++ Y +C I +A K F E+ ++ V WT
Sbjct: 232 LQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWT 291
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
++ AQ + + L L+R M + P++FT +S++S+C +L QG++ H + +
Sbjct: 292 TMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIF 351
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + V+++L+ MY KCG +A VF M ++++SWNSMI GYAQ+G + A+ L+
Sbjct: 352 GVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALY 411
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
EEM+ + +KPD ITF+GV+S+C H GLVE G+ YF S++K HG+ P DHYSC+++LLGR
Sbjct: 412 EEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGR 471
Query: 385 AGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQL 427
AG +++A D IK M PN +IW AA L+P A ++ L
Sbjct: 472 AGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIML 531
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N+YA W A VR LMK+ +K SWIEI N V++F AED++++ +I L
Sbjct: 532 SNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEEL 591
Query: 488 DFLVDQMKTLGYVPE--------VHEEKVD 509
+ L+ +++ G+ P+ V EEK D
Sbjct: 592 NRLIKKLQESGFTPDTNLVLHDVVEEEKFD 621
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 103/188 (54%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+V+ +++++ YSK + D VF++M V + VS+ +IA F+ LE + M+
Sbjct: 88 DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
E D+T S+L AC+ + +G+ H + + + V N+L +MY KCG ++
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A ++F+ M K++VSWNSMI+GY Q+G LF EM + PD +T ++S+
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYF 267
Query: 349 HGGLVEEG 356
G ++E
Sbjct: 268 QCGYIDEA 275
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 36/270 (13%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
+ + +C +I+ G + T +V+V ++L +Y+KC + A +F+ M +
Sbjct: 160 SVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNK 219
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NVVSW ++I+ + Q Q + C +L+ M++S L P+ T ++ILSA
Sbjct: 220 NVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA-------------- 265
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
Y +CG ++EA F + KD V W +M+ G AQ+G
Sbjct: 266 ---------------------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEE 304
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A+ LF EM+ + V+PD T V+SSC + +G+ G+ +L S +V
Sbjct: 305 DALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALV 364
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
D+ + G +A K+M + N + W +
Sbjct: 365 DMYSKCGETADAWIVFKRM-LTRNVISWNS 393
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 16/211 (7%)
Query: 212 AQEWQVDMCLELYRMMRNSMLEPND-FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
A+ Q M L LY +P D F +L SG L R + R FS+
Sbjct: 41 AKRLQTHMDLHLY--------QPTDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSW 92
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
N+++S Y K GNVE+ VF+ M D VS+N++IAG++ +G + +A++ F M +
Sbjct: 93 ----NAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQE 148
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+ + T + V+ +C ++ GK + L + ++ + ++ + G L++
Sbjct: 149 EGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQ 208
Query: 391 ARDFIKQMPIYPNAVIWEAAESRLLL--EPE 419
AR +M + N V W + S L +PE
Sbjct: 209 ARWLFDRM-VNKNVVSWNSMISGYLQNGQPE 238
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 220/393 (55%), Gaps = 18/393 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E +K D A + C S +++R G + + + YV S++I +Y KC +
Sbjct: 228 ESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLM 287
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF+ + RNVV WTA++A+ Q + L L+ M ++ N+FT+ +L+AC G
Sbjct: 288 ARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAG 347
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A G H + + GF ++ V N+LI+MY K G++E A VF++M +DI++WN+M
Sbjct: 348 LSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAM 407
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-G 367
I G++ HGL +A+ +F++M+ P+ +TF GV+S+C H GLV+EG Y + K G
Sbjct: 408 ICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFG 467
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------A 410
++P L+HY+C+V LL + G L EAR+F++ P+ + V W A
Sbjct: 468 VQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVA 527
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
E L ++P T+ L+N+YA + WD +VRKLM+DK +K PG SWIEI NV + F
Sbjct: 528 EFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIF 587
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ED + + + L+ +K LGY P++
Sbjct: 588 TSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDI 620
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 194/406 (47%), Gaps = 17/406 (4%)
Query: 5 FLQTCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTK 64
FL P S L +K L + S K + K++H L I++ R +++
Sbjct: 17 FLLRPNAVSPSSPLDLIKLLKL------SADTKNLKVGKTIHSHL----IVTSRATENSI 66
Query: 65 TEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHH 124
EV+ LI + + + + F+ N S+ + LL+ + V +L+
Sbjct: 67 IEVN-SLINFYAKVNQVSIAHNLFDR-MPERNVVSWSALMTGYLLNGFSLKVIRLLK--- 121
Query: 125 DLHRE-RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
D+ E + + L+ A++SC + G L ++TGF + YV ++L+++YSKC
Sbjct: 122 DMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKC 181
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
++ DA V+ E+PV ++V++ +I+++ + + LE+ R M + ++ + TF +
Sbjct: 182 SIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAF 241
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
S C L G H + + V++++I+MY KCG A VF+ + +++V
Sbjct: 242 SLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVV 301
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
W +++A Q+G A++LF +M ++ VK + T+ ++++C G +
Sbjct: 302 LWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHS 361
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K G K + + ++++ ++G +E A+ M ++ + + W A
Sbjct: 362 EKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM-MHRDIITWNA 406
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 5/217 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ +++ + +E +K + + + +C R G+ + ++GF +V VG++L
Sbjct: 317 EEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNAL 376
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+K I A KVF +M R++++W A+I F+ L +++ M + PN
Sbjct: 377 INMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNY 436
Query: 237 FTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TFT +LSAC G + +G H + G ++ ++S+ K G + EA
Sbjct: 437 VTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMR 496
Query: 296 NMHGK-DIVSWNSMIAG---YAQHGLAVRAIDLFEEM 328
K D+V+W +++ + +GL + EM
Sbjct: 497 TAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEM 533
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 225/391 (57%), Gaps = 20/391 (5%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+K +S +T+C + + G + G+ + Y+ ++LIT Y+ C+ + D+
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGS 249
+VF NVV WTA++ + + + L+++ MMR +L PN +FTS L++C G
Sbjct: 243 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVL-PNQSSFTSALNSCCGL 301
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
AL GR H +++G + + V NSLI MY +CGN+ + V +F + K+IVSWNS+I
Sbjct: 302 EALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVI 361
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GL 368
G AQHG + A+ F +M++ V+PD ITF G++S+C H G+ ++G+ F +++
Sbjct: 362 VGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSA 421
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAE 411
+ +LDHY+C+VD+LGR+G LEEA + I+ MP+ N+++W AA+
Sbjct: 422 EVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAK 481
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
+ LEP C++ +V L+NLYA W +R+R+ MK +G+ PG SWI I F
Sbjct: 482 CIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFL 541
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ D+S+ I L++L ++K LGYVP+
Sbjct: 542 SGDRSHPSSDRIYQKLEWLGGKLKELGYVPD 572
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 122/244 (50%), Gaps = 13/244 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+VY+ + +IT Y++ A ++F EMPV++VVSW ++I + M +L+
Sbjct: 25 DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLF---- 80
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ M E + ++T++++ G G+ A +M F I NS+I YC G VE
Sbjct: 81 DEMPERSVVSWTTMIN---GFLQFGKIEVAEGLFYKMPFRD-IAAWNSMIYGYCCNGRVE 136
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM--KQRVKPDAITFLGVISS 346
+ + +F M ++++SW SMI G QHG + A+ LF +MM VKP + T+ VI++
Sbjct: 137 DGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITA 196
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA-RDFIKQMPIYPNAV 405
C + + +G + K G + + ++ +E++ R F ++ N V
Sbjct: 197 CANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF--HGKLHMNVV 254
Query: 406 IWEA 409
IW A
Sbjct: 255 IWTA 258
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + ++ RE + + S ++A+ SC + G A++ G +V+VG+SL
Sbjct: 270 EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSL 329
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y +C + D +F+ + +N+VSW ++I AQ L + M SM+EP++
Sbjct: 330 IVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDE 389
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC-------KCGNVEE 289
TFT +LSAC+ SG +GR +FS + A + Y + G +EE
Sbjct: 390 ITFTGLLSACSHSGMSQKGRCL------FKYFSENKSAEVKLDHYACMVDILGRSGKLEE 443
Query: 290 AVYVFNNMHGKDIVSWNSMI 309
A + NM V NSM+
Sbjct: 444 AEELIRNMP----VKANSMV 459
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 216/361 (59%), Gaps = 20/361 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+R G+ V++ ++L+ +Y+K + +A VF +MPV+NVVSW+A+IA +A+ + L
Sbjct: 202 LRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEAL 261
Query: 222 ELYR--MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
EL+R M+ L PN T S+L AC AL QGR H +R G S + V ++L++
Sbjct: 262 ELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVT 321
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY +CG +E VF+ M +D+VSWNS+I+ Y HG +AI +FEEM V+P I+
Sbjct: 322 MYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPIS 381
Query: 340 FLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
F+ V+ +C H GLV+EGK+ F+SM HG+ P ++HY+C+VDLLGRA LEEA I+ M
Sbjct: 382 FVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENM 441
Query: 399 PIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAA 441
I P +W E A RL LEP A +V LA++YA WD
Sbjct: 442 RIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVK 501
Query: 442 RVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
RV+KL++ +GL+ PG SWIE+ +Y F + D+ N R+ ++ +L L ++K GYVP
Sbjct: 502 RVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVP 561
Query: 502 E 502
+
Sbjct: 562 Q 562
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 132/244 (54%), Gaps = 8/244 (3%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ GF + ++ + LI +YS I +A KVF++ R + + A+ A + + L
Sbjct: 97 LENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVL 156
Query: 222 ELYRMMRNSMLEPND-FTFTSILSACTGS----GALGQGRSAHCQTIRMGFFSYIQVANS 276
+YR M NS+ P+D FT+T +L AC S L +GR H +R G+ Y+ + +
Sbjct: 157 NMYRRM-NSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTT 215
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM--KQRVK 334
L+ MY K G V A VFN M K++VSW++MIA YA++G A A++LF E+M Q +
Sbjct: 216 LVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLC 275
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
P+++T + V+ +C +E+G++ + + GL L S +V + R G LE +
Sbjct: 276 PNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRV 335
Query: 395 IKQM 398
QM
Sbjct: 336 FDQM 339
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P + +I + ++ + LEL + N P T+ ++ +CT +L +
Sbjct: 35 PTASTADNNKLIQSLCKQGNLTQALELLSLEPN----PAQHTYELLILSCTHQNSLLDAQ 90
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H + GF +A LI+MY +++ A VF+ + I +N++ + G
Sbjct: 91 RVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAG 150
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG----GLVEEGKVYFDSMAKHGLKPEL 372
++++ M + D T+ V+ +C L+ +G+ + +HG +
Sbjct: 151 HGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYV 210
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD+ + G + A QMP+ N V W A
Sbjct: 211 HIMTTLVDMYAKFGCVSNASCVFNQMPV-KNVVSWSA 246
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 253/513 (49%), Gaps = 58/513 (11%)
Query: 40 SSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTF 99
SS LH A +V D I + S T + + + L N N+
Sbjct: 199 SSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMI 258
Query: 100 GSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQC 159
S V L + V +++S +++D + + +C + R ++ G
Sbjct: 259 -SGYVNCGLYQEALEMVRRMVS-------SGIELDEFTYPSVIRACANARLLQLGKQVHA 310
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE----- 214
+R + + +SL+TLY KC +A +FE+MP +++VSW A+++ +
Sbjct: 311 YVLRREDFS-FHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 215 ---------------WQV-----------DMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
W + + L+L+ M+ EP D+ F+ + +C
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
GA G+ H Q +++GF S + N+LI+MY KCG VEEA VF M D VSWN++
Sbjct: 430 LGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNAL 489
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HG 367
IA QHG V A+D++EEM+K+ ++PD ITFL V+++C H GLV++G+ YF+SM +
Sbjct: 490 IAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYR 549
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
+ P DHY+ ++DLL R+G EA I+ +P P A IWE AA
Sbjct: 550 IPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAA 609
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
+ L PE T++ L+N+YA W++ ARVRKLM+D+G+K CSWIE+ V+ F
Sbjct: 610 DKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTF 669
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+D S+ + L L +M+ LGYVP+
Sbjct: 670 LVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDT 702
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 132/301 (43%), Gaps = 56/301 (18%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
+++++ Y I A VFEE PV R+ V + A+I F+ + L+ M++
Sbjct: 84 TTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 232 LEPNDFTFTSILSACTGSGAL-----GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
+P+DFT+ S+L+ AL Q H ++ G V+N+L+S+Y +C +
Sbjct: 144 FKPDDFTYASVLAGL----ALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCAS 199
Query: 287 ----VEEAVYVFNNMHGKD--------------------------------IVSWNSMIA 310
+ A VF+++ KD +V++N+MI+
Sbjct: 200 SPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMIS 259
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK-VYFDSMAKHGLK 369
GY GL A+++ M+ ++ D T+ VI +C + L++ GK V+ + +
Sbjct: 260 GYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFS 319
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLAN 429
D + +V L + G EAR ++MP + V W A LL ++ H+ A
Sbjct: 320 FHFD--NSLVTLYYKCGKFNEARAIFEKMPA-KDLVSWNA-----LLSGYVSSGHIGEAK 371
Query: 430 L 430
L
Sbjct: 372 L 372
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+L R+ H I GF + + N LI +YCK ++ A +F+ + D ++ +M++
Sbjct: 29 SLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVS 88
Query: 311 GYAQHGLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
GY G A +FEE + R D + + +I+ H F M G K
Sbjct: 89 GYCASGDIALARSVFEETPVSMR---DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 370 PELDHYSCVV 379
P+ Y+ V+
Sbjct: 146 PDDFTYASVL 155
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 235/422 (55%), Gaps = 29/422 (6%)
Query: 125 DLHRERLKV-DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+LHR RL + D + +C +R G A + GF+ V+V +SL+ LY C
Sbjct: 105 ELHRRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGAC 164
Query: 184 RVIIDAYKVFEEMPVR--NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
+ A+KVF+EMPVR N+VSW +++ +FA + + L ++ M P+ FT S
Sbjct: 165 GLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVS 224
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GK 300
+L+AC GAL GR H ++G V+N+LI +Y KCG+V +A +F M G+
Sbjct: 225 VLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGR 284
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
+VSW S+I G A +G A++LF M ++++ P IT +GV+ +C H GLV++G YF
Sbjct: 285 TVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYF 344
Query: 361 DSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------ 407
D M + +G+ P ++H C+VDLLGRAG +EEA D+I MP+ PNAV+W
Sbjct: 345 DRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKK 404
Query: 408 ----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIE 462
+ A RL+ L+P + +V L+NLYA V W +RK M ++ NPG S +E
Sbjct: 405 LELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVE 464
Query: 463 IMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKR 515
+ N VY F D+S+ +I +L + ++++ GY+P ++ EE+ + A +
Sbjct: 465 LRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYH 524
Query: 516 TE 517
+E
Sbjct: 525 SE 526
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 225/391 (57%), Gaps = 20/391 (5%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+K +S +T+C + + G + G+ + Y+ ++LIT Y+ C+ + D+
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGS 249
+VF NVV WTA++ + + + L+++ MMR +L PN +FTS L++C G
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVL-PNQSSFTSALNSCCGL 317
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
AL GR H +++G + + V NSLI MY +CGN+ + V +F + K+IVSWNS+I
Sbjct: 318 EALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVI 377
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GL 368
G AQHG + A+ F +M++ V+PD ITF G++S+C H G+ ++G+ F +++
Sbjct: 378 VGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSA 437
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAE 411
+ +LDHY+C+VD+LGR+G LEEA + I+ MP+ N+++W AA+
Sbjct: 438 EVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAK 497
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
+ LEP C++ +V L+NLYA W +R+R+ MK +G+ PG SWI I F
Sbjct: 498 CIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFL 557
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ D+S+ I L++L ++K LGYVP+
Sbjct: 558 SGDRSHPSSDRIYQKLEWLGGKLKELGYVPD 588
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 122/244 (50%), Gaps = 13/244 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+VY+ + +IT Y++ A ++F EMPV++VVSW ++I + M +L+
Sbjct: 41 DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLF---- 96
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ M E + ++T++++ G G+ A +M F I NS+I YC G VE
Sbjct: 97 DEMPERSVVSWTTMIN---GFLQFGKIEVAEGLFYKMPFRD-IAAWNSMIYGYCCNGRVE 152
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM--KQRVKPDAITFLGVISS 346
+ + +F M ++++SW SMI G QHG + A+ LF +MM VKP + T+ VI++
Sbjct: 153 DGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITA 212
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA-RDFIKQMPIYPNAV 405
C + + +G + K G + + ++ +E++ R F ++ N V
Sbjct: 213 CANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF--HGKLHMNVV 270
Query: 406 IWEA 409
IW A
Sbjct: 271 IWTA 274
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + ++ RE + + S ++A+ SC + G A++ G +V+VG+SL
Sbjct: 286 EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSL 345
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y +C + D +F+ + +N+VSW ++I AQ L + M SM+EP++
Sbjct: 346 IVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDE 405
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC-------KCGNVEE 289
TFT +LSAC+ SG +GR +FS + A + Y + G +EE
Sbjct: 406 ITFTGLLSACSHSGMSQKGRCL------FKYFSENKSAEVKLDHYACMVDILGRSGKLEE 459
Query: 290 AVYVFNNMHGKDIVSWNSMI 309
A + NM V NSM+
Sbjct: 460 AEELIRNMP----VKANSMV 475
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 230/388 (59%), Gaps = 33/388 (8%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S+ + +C + + G +++ VG++L+++Y++ I +A F+++
Sbjct: 364 SSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYE 423
Query: 199 RNVVSWTAIIAAFA-----QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+N+VS++ + Q++Q++ RM L + FTF S++SA G L
Sbjct: 424 KNMVSFSGNLDGDGRSNTYQDYQIE------RME----LGISTFTFGSLISAAASVGMLT 473
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
+G+ H +++ GF S + NSL+SMY +CG + +A VF+ M+ +++SW SMI+G A
Sbjct: 474 KGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLA 533
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPEL 372
+HG A RA++LF +M+ VKP+ +T++ V+S+C H GLV+EGK +F M K HGL P +
Sbjct: 534 KHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRM 593
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLL 415
+HY+C+VDLLGR+GL+E+A DFI +MP +A++W+ AA +
Sbjct: 594 EHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQ 653
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
LEP+ A +V L+NLYA WDQ AR+R LM+DK L G SW+ + N ++ FRA D
Sbjct: 654 LEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDT 713
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPEV 503
S+ + EI L+ L+ ++K +GYVP+
Sbjct: 714 SHPQAEEIYTKLETLIREIKVMGYVPDT 741
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 145/283 (51%), Gaps = 22/283 (7%)
Query: 133 VDASFLSTAVTSCGSTR--------NIRGGAPYQCLAIRTGFIA-NVYVGSSLITLYSKC 183
++ L A T C +T+ ++ GGA L + GF +V VG +LI +++K
Sbjct: 144 LEEGLLPNAFTLCAATQACFASELFHLAGGAVLG-LVFKLGFWGTDVSVGCALIDMFAKN 202
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
++ +VF+ + R VV WT +I +AQ D +EL+ M + +P+ +T +S+L
Sbjct: 203 GDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSML 262
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN---VEEAVYVFNNMHGK 300
SACT G+ G+ H +R+G S V+ L+ MY K N + A VFN M
Sbjct: 263 SACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKH 322
Query: 301 DIVSWNSMIAGYAQHGLA-VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
++++W ++++GY Q G + + LF +M+ + ++P+ IT+ ++ +C + G + G+
Sbjct: 323 NVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGR-- 380
Query: 360 FDSMAKHGLKPELDHYSCV----VDLLGRAGLLEEARDFIKQM 398
+ H +K L + V V + +G +EEAR Q+
Sbjct: 381 --QIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL 421
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 18/273 (6%)
Query: 150 NIRGGAPYQCLAIRTGFI--ANVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWT 205
+I G Q +RTG + + V +SL+TLYSKC + A VF+ MPV R++VSWT
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG-QGRSAHCQTIR 264
A+ + ++ L L+ L PN FT + AC S G + +
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181
Query: 265 MGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+GF+ + V +LI M+ K G++ VF+ + + +V W +I YAQ G + A++
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV----V 379
LF +M++ +PD T ++S+C G G+ + GL+ + SCV V
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESD----SCVSCGLV 297
Query: 380 DLLGRA---GLLEEARDFIKQMPIYPNAVIWEA 409
D+ ++ L AR+ +MP + N + W A
Sbjct: 298 DMYAKSHNGQSLHNAREVFNRMPKH-NVMAWTA 329
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 155/330 (46%), Gaps = 27/330 (8%)
Query: 104 VFDQLLDTPVVDVEKLISMHH-------------DLHRERLKVDASFLSTAVTSCGSTRN 150
VFD L + VV LI+ + D+ + D LS+ +++C +
Sbjct: 211 VFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGS 270
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC---RVIIDAYKVFEEMPVRNVVSWTAI 207
R G LA+R G ++ V L+ +Y+K + + +A +VF MP NV++WTA+
Sbjct: 271 FRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTAL 330
Query: 208 IAAFAQEW-QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
++ + Q Q + + L+ M N + PN T++S+L AC G GR H ++
Sbjct: 331 LSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSN 390
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
V N+L+SMY + G++EEA + F+ ++ K++VS++ + G + + ++
Sbjct: 391 LADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRS-------NTYQ 443
Query: 327 EMMKQRVK--PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
+ +R++ TF +IS+ G++ +G+ K G + + +V + R
Sbjct: 444 DYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSR 503
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
G L +A +M + N + W + S L
Sbjct: 504 CGYLVDACQVFDEMNDH-NVISWTSMISGL 532
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 121/227 (53%), Gaps = 18/227 (7%)
Query: 103 NVFDQLLDTPVV------DVEKLISMHHDLHRERLKVDASFLS--TAVTSCGSTRNIRGG 154
+ FDQL + +V D + + + D ER+++ S + + +++ S + G
Sbjct: 416 HAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKG 475
Query: 155 APYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE 214
L+++ GF ++ +G+SL+++YS+C ++DA +VF+EM NV+SWT++I+ A+
Sbjct: 476 QRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKH 535
Query: 215 WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM-----GFFS 269
LEL+ M + ++PND T+ ++LSAC+ +G + +G+ + RM G
Sbjct: 536 GYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGK----EHFRMMQKHHGLIP 591
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQH 315
++ ++ + + G VE+A+ N M + D + W +++ H
Sbjct: 592 RMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTH 638
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 224/377 (59%), Gaps = 28/377 (7%)
Query: 146 GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
G+ N+ AP + AI + +++++ Y + A + F MPVRN+VSW
Sbjct: 151 GAAENLFRNAPEKTDAI---------LWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWN 201
Query: 206 AIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
A++A + + + L +++ M+ +++++PN T +S+L C+ ALG GR H ++
Sbjct: 202 AVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMK 261
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
+ I V SL+SMYCKCG++++A +F+ MH KDIV+WN+MI+GYAQHG +AI L
Sbjct: 262 LPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKL 321
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLG 383
FE+M + V PD IT L V+++C H GL + G F++M + + ++P++DHYSC+VDLL
Sbjct: 322 FEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLC 381
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW-------------EAAE--SRLLLE--PECAATHVQ 426
RAGLLE A + I MP P+ + E AE +R L+E P+ A +VQ
Sbjct: 382 RAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQ 441
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
LAN+YA WD +RVR+ MKD + PG SW+EI V + FR+ D+ + +L I
Sbjct: 442 LANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDK 501
Query: 487 LDFLVDQMKTLGYVPEV 503
LD L MK +GY P++
Sbjct: 502 LDRLGKLMKAMGYSPDL 518
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 121/241 (50%), Gaps = 17/241 (7%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++L++ + C I A++VF MPVR+V SW +++ ++ ++ ++R +M
Sbjct: 76 NTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFR----AMPA 131
Query: 234 PNDFTFTSILSACTGSGALGQG----RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
N ++ ++++A SG +G R+A +T + + +++S Y GNV++
Sbjct: 132 RNAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAI-------LWTAMVSGYMDTGNVQK 184
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCR 348
A+ F M +++VSWN+++AGY ++ A A+ +F+ M++ V+P+ T V+ C
Sbjct: 185 AMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCS 244
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
+ + G+ K L + + ++ + + G L++A +M + V W
Sbjct: 245 NLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHT-KDIVAWN 303
Query: 409 A 409
A
Sbjct: 304 A 304
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ + S LS+ + C + + G ++ ++ VG+SL+++Y KC + DA
Sbjct: 229 VQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDAC 288
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F+EM +++V+W A+I+ +AQ ++L+ M++ + P+ T ++L+AC +G
Sbjct: 289 KLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTG 348
Query: 251 ALGQGRSAHC-QTIRMGFFSYIQVA--NSLISMYCKCGNVEEAVYVFNNM 297
G C +T++ + QV + ++ + C+ G +E AV + ++M
Sbjct: 349 LCDFG--IQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSM 396
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 236/440 (53%), Gaps = 53/440 (12%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPY--QCLAIRTGFI--ANVYVGSSLITLYSKCR 184
+R+ D ++ +++C + G Q + ++ F+ A + V ++L+TLYSK
Sbjct: 290 KRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSG 349
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQE--------------------WQV------- 217
I A K+F+ M +++VVSW I++ + + W V
Sbjct: 350 KIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVH 409
Query: 218 ----DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ L+L+ MR+ ++P D+T+ ++AC GAL G+ H ++ GF +
Sbjct: 410 GGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSA 469
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
N+L++MY +CG V++A VF M D VSWN+MI+ QHG A++LF++M+ Q +
Sbjct: 470 GNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGI 529
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEAR 392
PD I+FL ++++C H GLV++G YF+SM + G+ P DHY+ ++DLLGRAG + EAR
Sbjct: 530 YPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEAR 589
Query: 393 DFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVR 435
D IK MP P IWE AA+ + PE T++ L+N Y+
Sbjct: 590 DLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAG 649
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W AARVRKLM+D+G+K PGCSWIE+ N V+ F D + E+ L+ + +M+
Sbjct: 650 RWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMR 709
Query: 496 TLGYVPEVHEEKVDDASHKR 515
LGYVP+ D A H++
Sbjct: 710 KLGYVPDTKFALQDMAPHEK 729
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 149/326 (45%), Gaps = 70/326 (21%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCR---VIIDAYKVFEEMPVRNVVSWTAIIAAFAQE 214
C + G A + V ++LI LY KC V DA KV +EMP ++ ++WT I+ ++
Sbjct: 184 HCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRK 243
Query: 215 --------------------W--------QVDMC---LELYRMMRNSMLEPNDFTFTSIL 243
W Q MC EL+R M + + P++FTFTS+L
Sbjct: 244 GDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLL 303
Query: 244 SACTGSGALGQGRSAHCQTIRM--GFF--SYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
SAC +G G+S H Q IR+ F + + V N+L+++Y K G + A +F++M
Sbjct: 304 SACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTL 363
Query: 300 KDIVSWNS-------------------------------MIAGYAQHGLAVRAIDLFEEM 328
KD+VSWN+ M++GY GLA A+ LF +M
Sbjct: 364 KDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQM 423
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
+ VKP T+ G +++C G ++ GK + + G + + ++ + R G +
Sbjct: 424 RSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAV 483
Query: 389 EEARDFIKQMPIYPNAVIWEAAESRL 414
++AR MP ++V W A S L
Sbjct: 484 KDARLVFLVMPNV-DSVSWNAMISAL 508
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 40/225 (17%)
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYR--MMR 228
+SL++ Y+ + D+ F+ +PV R+ V A+I+AFA+ + ++R +
Sbjct: 92 ATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLAS 151
Query: 229 NSMLEPNDFTFTSILSACTGSG--ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC-- 284
+ L P+D++FTS+LSA A+ HC ++G + + V+N+LI++Y KC
Sbjct: 152 DDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDA 211
Query: 285 --------------------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
G+V A F + G+ V WN+MI+GY
Sbjct: 212 PGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGY 271
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
Q G+ A +LF M+ +R+ PD TF ++S+C + G GK
Sbjct: 272 VQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGK 316
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 222/361 (61%), Gaps = 20/361 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+R GF +V++ ++L+ +Y++ +++A +VF++MPV+NVVSW+A+IA +++ + L
Sbjct: 210 LRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEAL 269
Query: 222 ELYR--MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
EL+R M+ N L PN T S+L AC AL QG+ H +R G S + V ++L++
Sbjct: 270 ELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVT 329
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
+Y +CGN+E VF M +D+VSWNS+I+ Y HG +AI +F+EM+ Q + P I+
Sbjct: 330 VYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPIS 389
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
F+ V+ +C H GLVEEGKV F+SM + H + P ++HY+C+VDLLGRA L+EA I M
Sbjct: 390 FVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDM 449
Query: 399 PIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAA 441
I P +W E A SRL LEP A +V LA++YA + W++
Sbjct: 450 RIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVK 509
Query: 442 RVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
RV+ L++ +GL+ PG S IEI +Y F + D+ N ++ ++ +L L +MK GYVP
Sbjct: 510 RVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVP 569
Query: 502 E 502
+
Sbjct: 570 D 570
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 133/263 (50%), Gaps = 6/263 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC ++ G I G + ++ + LI +YS+ I +A KVF++ R +
Sbjct: 85 ILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTI 144
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA----LGQGRS 257
W A+ A L+LYR M + + FT+T +L AC S A L GR
Sbjct: 145 YVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGRE 204
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R GF ++ + +L+ MY + G V A VF+ M K++VSW++MIA Y+++G
Sbjct: 205 IHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGK 264
Query: 318 AVRAIDLFEEMM--KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
+ A++LF +MM Q + P+++T + V+ +C +E+GK+ + + GL L
Sbjct: 265 PLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVV 324
Query: 376 SCVVDLLGRAGLLEEARDFIKQM 398
S +V + R G LE ++M
Sbjct: 325 SALVTVYARCGNLELGHRVFERM 347
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 9/209 (4%)
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+I + ++ ++ L++ N P T+ ++ +CT +L QG H I
Sbjct: 51 NPLIQSLCKQGNLNQALQVLSQEPN----PTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G +A LI+MY + +++ A VF+ + I WN++ G +DL
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHG----GLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
+ M + V D T+ V+ +C L+ G+ + +HG + + + ++D
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLD 226
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ R G + A QMP+ N V W A
Sbjct: 227 MYARFGCVLNASRVFDQMPV-KNVVSWSA 254
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 234/431 (54%), Gaps = 32/431 (7%)
Query: 100 GSSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCG 146
G++ VF ++ DT +V +I+ + ++ + ++ D +++ V +C
Sbjct: 349 GATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 408
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+ ++ G I+ G +N+ V ++LI +Y+KC + +A VF ++PV+++VSW
Sbjct: 409 CSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNT 468
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I ++Q + LEL+ M+ +P+D T +L AC G AL +GR H +R G
Sbjct: 469 MIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRG 527
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+FS + VA +L+ MY KCG + A +F+ + KD++SW MIAGY HG AI F
Sbjct: 528 YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFN 587
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRA 385
EM ++PD +F ++++C H GL+ EG +F+SM G++P+L+HY+CVVDLL R
Sbjct: 588 EMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARM 647
Query: 386 GLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLA 428
G L +A FI+ MPI P+ IW + AE LEP+ +V LA
Sbjct: 648 GNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLA 707
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
N+YA W++ ++RK M+ +G K NPGCSWIE+ F A + + + +I +L
Sbjct: 708 NVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLS 767
Query: 489 FLVDQMKTLGY 499
L QM+ Y
Sbjct: 768 KLTMQMQNEDY 778
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 155/270 (57%), Gaps = 3/270 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++VD + L + + +C + N+ G ++ F V ++L+ +YSKC + A
Sbjct: 292 VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 351
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF +M +VSWT+IIAA+ +E + L+ M++ + P+ +T TSI+ AC S
Sbjct: 352 EVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 411
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+L +GR H I+ G S + V N+LI+MY KCG+VEEA VF+ + KDIVSWN+MI
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY+Q+ L A++LF +M KQ KPD IT V+ +C +++G+ + + G
Sbjct: 472 GYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS 530
Query: 371 ELDHYSC-VVDLLGRAGLLEEARDFIKQMP 399
+L H +C +VD+ + GLL A+ +P
Sbjct: 531 DL-HVACALVDMYAKCGLLVLAQLLFDMIP 559
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 128/246 (52%), Gaps = 1/246 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ GF +N V +SLI Y K + A+ +F+E+ +VVSW ++I L
Sbjct: 222 LKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGL 281
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
E++ M +E + T S+L AC G L GR+ H ++ F + +N+L+ MY
Sbjct: 282 EIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMY 341
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCGN+ A VF M IVSW S+IA Y + GL AI LF+EM + V+PD T
Sbjct: 342 SKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVT 401
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
++ +C +++G+ + K+G+ L + ++++ + G +EEAR ++P+
Sbjct: 402 SIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV- 460
Query: 402 PNAVIW 407
+ V W
Sbjct: 461 KDIVSW 466
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 123/254 (48%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C +++ G + I G + +G+ L+ +Y C ++ K+F+++ V W
Sbjct: 104 CAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLW 163
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+++ +A+ + L++ M+ + N +TFT +L G + + + H ++
Sbjct: 164 NLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK 223
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
+GF S V NSLI+ Y K G VE A +F+ + D+VSWNSMI G +G + +++
Sbjct: 224 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEI 283
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F +M+ V+ D T + V+ +C + G + G+ K E+ + ++D+ +
Sbjct: 284 FIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 343
Query: 385 AGLLEEARDFIKQM 398
G L A + +M
Sbjct: 344 CGNLNGATEVFVKM 357
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
A I F + + +EL ++ L N ++ S+L C +L G+ H I
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G + L+ MY CG++ + +F+ + + WN +++ YA+ G ++ L
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F++M K V + TF V+ G V+E K + K G + ++ +
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 242
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G +E A + ++ P+ V W +
Sbjct: 243 FGGVESAHNLFDELS-EPDVVSWNS 266
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 237/450 (52%), Gaps = 21/450 (4%)
Query: 71 LIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRER 130
LI + +T L SQ F +++T+ S + PV+ ++ M E
Sbjct: 95 LINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIG----EN 150
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L D +A +C G CL I+TG+ +V+VGSSL+ +Y+KC I +A
Sbjct: 151 LCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEAR 210
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VF+EMP RNVVSW+ +I + Q + + + L++ L+ NDFT +S++ C +
Sbjct: 211 NVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSAT 270
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L G+ H + + V +SLIS+Y KCG +E A VF+ + K++ WN+M+
Sbjct: 271 LLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLI 330
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
AQH A DLF +M ++P+ ITFL V+ +C H GLVEEGK YF M K+ ++P
Sbjct: 331 ACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEP 390
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
HY+ +VDLLGRAG L+EA IK MP P +W AA+
Sbjct: 391 GTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKV 450
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
L + HV L+N YA ++ AA+ RK+++D+G+K G SWIE N V++F A
Sbjct: 451 FELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAG 510
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
D+ + R+ EI L+ L ++M+ GYV +
Sbjct: 511 DRFHVRMKEIYQKLEDLGEEMERAGYVADT 540
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 13/268 (4%)
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+R++ G I++G V LI YSK ++ + + +VFEE ++ +W+++
Sbjct: 67 SRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSV 126
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I++FAQ + + ++ + M L P+D F S AC G G+S HC I+ G+
Sbjct: 127 ISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGY 186
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ V +SL+ MY KCG+++EA VF+ M +++VSW+ MI GY Q G A+ LF+E
Sbjct: 187 DVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKE 246
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL----KPELDHY--SCVVDL 381
+ + + + T VI C L+E GK HGL +L + S ++ L
Sbjct: 247 ALLEGLDVNDFTLSSVIRVCGSATLLELGKQI------HGLCFKTSYDLSGFVGSSLISL 300
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ GL+E A ++PI N +W A
Sbjct: 301 YSKCGLIEGAYRVFDEVPI-KNLGMWNA 327
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 223/397 (56%), Gaps = 18/397 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + +E +K D+ +++ +++ N+ G AI+ G ++V+V SL+ +
Sbjct: 836 LDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDM 895
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSK A VF MP +N+V+W ++I+ ++ +M + L + + +
Sbjct: 896 YSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSI 955
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
T++L A + AL +G++ H IR+ S +QV N+LI MY KCG ++ A +F NM
Sbjct: 956 TTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPR 1015
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+++V+WNSMIAGY HG A+ LF+EM + PD +TFL +I+SC H G+VEEG
Sbjct: 1016 RNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNL 1075
Query: 360 FDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F M ++G++P ++HY+ VVDLLGRAG L++A FI+ MPI + +W
Sbjct: 1076 FQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHR 1135
Query: 408 ------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
A++ L +EP + +V L NLY V WD+AA +R MK +GLK +PGCSWI
Sbjct: 1136 NMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWI 1195
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
E+ N V F + D S+TR EI L L M+ G
Sbjct: 1196 EVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 1232
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 149/293 (50%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + ++ E K+ ++ + A T+C + G C I+ F + YV +SL
Sbjct: 631 EKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSL 690
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+T+Y+K + DA KVF+++ + V A+I+AF + L LY M+ +
Sbjct: 691 LTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDS 750
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT +S+LS C+ G+ GR+ H + I+ S + + ++L++MY KCG+ E+A VF
Sbjct: 751 FTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYT 810
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D+V+W SMIAG+ Q+ A+DLF M K+ VK D+ VIS+ VE G
Sbjct: 811 MKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELG 870
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K GL+ ++ +VD+ + G E A MP N V W +
Sbjct: 871 HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP-NKNLVAWNS 922
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 160/331 (48%), Gaps = 14/331 (4%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFL 138
+ + S + VFDQ+LD V +IS +++ + VD+ +
Sbjct: 694 YAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTI 753
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S+ ++ C + G I+ +NV + S+L+T+Y KC DA VF M
Sbjct: 754 SSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKE 813
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+VV+W ++IA F Q + L+L+R M ++ + TS++SA G + G
Sbjct: 814 RDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLI 873
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H I+ G S + VA SL+ MY K G E A VF++M K++V+WNSMI+ Y+ +GL
Sbjct: 874 HGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLP 933
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+I+L ++++ D+++ V+ + + +GK + + +L + +
Sbjct: 934 EMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENAL 993
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+D+ + G L+ A+ + MP N V W +
Sbjct: 994 IDMYVKCGCLKYAQLIFENMP-RRNLVTWNS 1023
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 176/398 (44%), Gaps = 28/398 (7%)
Query: 12 KKPCSALQSLK-TLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLR 70
K P SAL + K T + ++ S L + +++H ++ + + S ++ ++++
Sbjct: 431 KTPHSALTTAKFTFPSLLKTCAS--LSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVK 488
Query: 71 --LIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVD-------VEKLIS 121
L+ LQ K +S+ D T N PV+D E+ ++
Sbjct: 489 CGLLGSALQVFDKMSESRDSAPDITVWN---------------PVIDGYFKYGHFEEGLA 533
Query: 122 MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
+ ++ D LS + C G IR F + Y+ ++LI +YS
Sbjct: 534 QFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYS 593
Query: 182 KCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
C ++A+ +F ++ R N+V+W +I F + + LELY + +N + +FT
Sbjct: 594 SCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFT 653
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
+AC+ L GR HC I+M F V SL++MY K G+VE+A VF+ + K
Sbjct: 654 GAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDK 713
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
++ N+MI+ + +G A A+ L+ +M D+ T ++S C G + G+
Sbjct: 714 EVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVH 773
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ K ++ + S ++ + + G E+A M
Sbjct: 774 AEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTM 811
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 144/313 (46%), Gaps = 26/313 (8%)
Query: 107 QLLDTPVVDVEKLI------SMHHDLHRERLKVDASFLSTA-------VTSCGSTRNIRG 153
+L++ P V+ K + S +LH K S L+TA + +C S N+
Sbjct: 403 ELMNLPQVEEIKALVQQGKYSQALELHS---KTPHSALTTAKFTFPSLLKTCASLSNLYH 459
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP-----VRNVVSWTAII 208
G + G ++ Y+ +SLI +Y KC ++ A +VF++M ++ W +I
Sbjct: 460 GRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVI 519
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ + + L + M+ + P+ ++ + +L C GR H IR F
Sbjct: 520 DGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFE 579
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ +LI MY C EA +F + + +IV+WN MI G+ ++G+ ++++L+
Sbjct: 580 GDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSL 639
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC--VVDLLGRA 385
+ K + +F G ++C HG +++ G+ + K + D Y C ++ + ++
Sbjct: 640 AKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQD--DPYVCTSLLTMYAKS 697
Query: 386 GLLEEARDFIKQM 398
G +E+A+ Q+
Sbjct: 698 GSVEDAKKVFDQV 710
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/281 (45%), Positives = 175/281 (62%), Gaps = 18/281 (6%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
IL AC AL QG+ H I++GF + V+N L+ MY KCG +E+A VF+ +
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
D+ SWN+MI+G AQHG A+ LFE+M++ VKP+ ITF+ V+S C H GLV+EG+
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 359 YFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------- 407
YFDSM + HG+ P+ +HYSC+VDL GRAG L+EA +FI QMP+ PNA +W
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 408 -------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
A E + L PE T+V L+N+YA WD A +VRK+MKD+ +K PGCSW
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
IE+ N V+ F D S+ ++ EI L+ L QMK GY+P
Sbjct: 241 IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIP 281
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + +C S + G I+ GF +V V + L+ +Y KC I DA +VF ++
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+V SW A+I+ AQ + L+ M + ++PN TF +LS C+ +G + +GR+
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 258 AHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYAQH 315
R G + + ++ ++ + G ++EA+ N M + S W S++ H
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 316 G---LAVRAIDLFEEMMKQ 331
G LA RA++ E+ +
Sbjct: 181 GNIELAERAVEQLIELTPE 199
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 232/415 (55%), Gaps = 51/415 (12%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G C + + GF ++ Y+ ++L+ +YS C ++ A KVF++M ++VVSW +I A+AQ
Sbjct: 94 GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 153
Query: 214 E---------------------WQV-----------DMCLELYRMMRNSMLEPNDFTFTS 241
W + + L L+ M+ S ++ + T S
Sbjct: 154 WDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMAS 213
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+L ACT GAL G+ H + + + +L+ MY KCG++E A+ VF M KD
Sbjct: 214 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 273
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+++W ++I G A G ++A++LF EM VKPDAITF+GV+++C H GLV EG YF+
Sbjct: 274 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFN 333
Query: 362 SMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP----------------NA 404
SM K+G++P ++HY C+VD+LGRAG + EA D I+ MP+ P N
Sbjct: 334 SMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNL 393
Query: 405 VIWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
V+ E A +L+ L+P+ T+V L+N+Y+ ++ W+ A ++R+LM ++ +K PGCS IE+
Sbjct: 394 VVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEV 453
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD-DASHKRTE 517
VV+ F D S+ + SEI LD ++ ++K+ GYVP+ E D D K E
Sbjct: 454 GGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENE 508
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 36/250 (14%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF ++P + +II + + + Y++M L+P+ FTF S+ +C G
Sbjct: 34 VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GV 90
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L +G+ HC + ++GF S + N+L++MY CG + A VF+ M K +VSW +MI
Sbjct: 91 LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 150
Query: 312 YAQHGLAVRAI--------------------------------DLFEEMMKQRVKPDAIT 339
YAQ L AI LF EM VK D +T
Sbjct: 151 YAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVT 210
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++ +C H G +E GK + K ++ ++ + +VD+ + G +E A ++MP
Sbjct: 211 MASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMP 270
Query: 400 IYPNAVIWEA 409
+ + W A
Sbjct: 271 -EKDVMTWTA 279
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G++ A VFN + + NS+I GY L +AI ++ MM Q + PD TF +
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
SC G++ EGK K G + + ++++ G L AR +M + +
Sbjct: 86 KSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKM-VNKSV 141
Query: 405 VIW 407
V W
Sbjct: 142 VSW 144
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 217/386 (56%), Gaps = 19/386 (4%)
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+C + G + + GF +V V ++++ Y KCR A VF+ M VRN V
Sbjct: 223 NACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSV 282
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SW ++I A+AQ + L +Y RN+ EP DF +S+L+ C G L GR+ H
Sbjct: 283 SWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVA 342
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+R + I VA++L+ MY KCG VE+A VF +M +++V+WN+MI GYA G A A+
Sbjct: 343 VRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNAL 402
Query: 323 DLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVD 380
+F+ M++ P+ IT + VI++C GGL ++G FD+M + G++P +HY+CVVD
Sbjct: 403 AVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVD 462
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAAT 423
LLGRAG+ E A + I++MP+ P+ +W A+E L+P+ +
Sbjct: 463 LLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGN 522
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
HV L+N+ A W +A VRK MK+ G+K PGCSWI NVV+ F A+D + R SEI
Sbjct: 523 HVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEI 582
Query: 484 LPVLDFLVDQMKTLGYVPEVHEEKVD 509
+L L QM+ GY+P+ D
Sbjct: 583 QALLAKLKKQMQASGYMPDTQYSLYD 608
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 2/268 (0%)
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+C R G LA+R G++ + +V + + +Y K + A ++FEEMP RNV
Sbjct: 121 AACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNV 180
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
++W A++ + + + Y +R + PN + + +AC G+ L G H
Sbjct: 181 IAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGF 240
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
+ GF + V+N+++ Y KC +A VF+ M ++ VSW SMI YAQHG A
Sbjct: 241 VVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDA 300
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ ++ +P V+++C + G+ + + + S +VD+
Sbjct: 301 LAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDM 360
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ G +E+A MP N V W A
Sbjct: 361 YGKCGGVEDAEQVFLDMP-ERNLVTWNA 387
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 116/286 (40%), Gaps = 9/286 (3%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIR---TGFIANVYVGSSLITLYSKCR 184
R D L A + S+R+ R G A+R G ++ + L+ LYSK
Sbjct: 2 RPAAAADPQLLGAAFEAAISSRSPRLGRAAHARALRLLSPGLPP--FICAHLVNLYSKLD 59
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL- 243
+ A P VVS+TA I+ AQ + L + M L PNDFTF S
Sbjct: 60 LPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFK 119
Query: 244 -SACTGSGALGQGRSAHCQTIRMGFFSYIQ-VANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+AC G H +R G+ V+ + + MY K G + A +F M ++
Sbjct: 120 AAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRN 179
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+++WN+++ G + + + + P+ ++ ++C + G+ +
Sbjct: 180 VIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHG 239
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ G ++ + +VD G+ +AR M + N+V W
Sbjct: 240 FVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVR-NSVSW 284
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 252/473 (53%), Gaps = 62/473 (13%)
Query: 98 TFGSSNVFDQLLDTPVV---DVEKLISMHHDLHRERLKVDA----SFLSTAV-TSCGSTR 149
FG N + L T ++ ++ L+S + + R++ D SF +A+ +CG+
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFY-TRMRRDGVGPVSFTFSALFKACGAAL 156
Query: 150 NIRGGAPYQCLAIRTG-FIANVYVGSSLITLYSKCRVIIDAYKVFEEM------------ 196
N+ G I G F +++YVG+S+I LY KC + A KVF+EM
Sbjct: 157 NMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELI 216
Query: 197 -------------------PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
P++++V+WTA++ +AQ + LE ++ M++ +E ++
Sbjct: 217 VAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEV 276
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFF--SYIQVANSLISMYCKCGNVEEAVYVFN 295
T ++SAC GA+ R GF + V ++LI MY KCG+ +EA VF
Sbjct: 277 TLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFE 336
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M +++ S++SMI GYA HG A A+ LF +M+K ++P+ +TF+G++S+C H GLVE+
Sbjct: 337 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQ 396
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
G+ F M K G+ P DHY+C+VDLLGRAG LEEA D +K MP+ PN +W
Sbjct: 397 GRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGAC 456
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AA LEP ++ L+N+YA W++ +++RK++++KG K NPG
Sbjct: 457 RIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPG 516
Query: 458 CSWIEIMN-VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
CSW E N ++ F A D ++ R SEI L L++++++ GY P + D
Sbjct: 517 CSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYD 569
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYK--VFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
IR G YV + LI + +K V + +Y VF ++ N WTA+I +A + +
Sbjct: 66 IRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSE 125
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM-GFFSYIQVANSLI 278
Y MR + P FTF+++ AC + + G+ H QTI + GF S + V NS+I
Sbjct: 126 STNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMI 185
Query: 279 SMYCKC-------------------------------GNVEEAVYVFNNMHGKDIVSWNS 307
+Y KC G++E A +F+++ KD+V+W +
Sbjct: 186 DLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTA 245
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M+ GYAQ+G A++ F++M ++ D +T GVIS+C G V+ D + G
Sbjct: 246 MVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSG 305
Query: 368 LKPELDHY--SCVVDLLGRAGLLEEARDFIKQM 398
P + S ++D+ + G +EA + M
Sbjct: 306 FGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 338
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 239/431 (55%), Gaps = 49/431 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + + + R + +D L T + C G I++G ++ VG+++
Sbjct: 361 EDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAI 420
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV-------DMC--------- 220
IT+Y+KC A VF MP+RN +SWTA+I AF++ + DM
Sbjct: 421 ITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWN 480
Query: 221 ---------------LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
L+LY MR++ ++P+ TFT+ + AC + G +
Sbjct: 481 SMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKF 540
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + VANS+++MY +CG ++EA F+++ KD++SWN+M+A +AQ+GL ++ ID F
Sbjct: 541 GLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTF 600
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
E+M+K KP+ I+++ V+S C H GLV EGK YFDSM + G+ P +H+SC+VDLLGR
Sbjct: 601 EDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGR 660
Query: 385 AGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQL 427
AGLLE+A+D I+ MP PNA +W E A +L+ L+ E + +V L
Sbjct: 661 AGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLL 720
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N+Y+ D A +RKLMK KG++T+ GCSWIE+ N V+ F ++ S+ ++ E+ L
Sbjct: 721 SNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKL 780
Query: 488 DFLVDQMKTLG 498
+ ++ ++ G
Sbjct: 781 EEMMKMIEDTG 791
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 45/339 (13%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
+ +++C ST +++ GA +R ++ G+ LI +Y+KC + A +VF+ +
Sbjct: 283 SVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREH 342
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+ +SW ++I + L L+ MR S + ++F +IL C+G G H
Sbjct: 343 DHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLH 402
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV-------------------------- 293
TI+ G S V N++I+MY KCG+ ++A V
Sbjct: 403 GYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIG 462
Query: 294 -----FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
F+ M ++IV+WNSM++ Y Q+G + + L+ M V+PD ITF I +C
Sbjct: 463 KARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACA 522
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNA 404
+V+ G K GL + + +V + R GL++EA++ + I NA
Sbjct: 523 DLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNA 582
Query: 405 VIWEAAESRL----------LLEPECAATHVQLANLYAG 433
++ A++ L +L+ EC H+ ++ +G
Sbjct: 583 MLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSG 621
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 32/307 (10%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC-------RVI 186
D ++ + +CGS + R L + GF + +S++ +Y KC V
Sbjct: 145 DPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVF 204
Query: 187 ID------------------------AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
D A ++F MP R+ VSW +I+ F+Q CL
Sbjct: 205 FDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLA 264
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
++ M N PN T+ S+LSAC + L G H + +RM + N LI MY
Sbjct: 265 MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYA 324
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG ++ A VF ++ D +SWNS+I G GL A+ LF +M + V D
Sbjct: 325 KCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPT 384
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
++ C G++ K G+ + ++ + + G ++A + MP+
Sbjct: 385 ILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPL-R 443
Query: 403 NAVIWEA 409
N + W A
Sbjct: 444 NTISWTA 450
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 49/273 (17%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVR--NVVSWTAIIAAFAQEWQVDMCLELYRM 226
N++ +++I + DA K+F+EMPVR + VSWT +I+ ++Q E + +
Sbjct: 73 NIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSL 132
Query: 227 MRNSMLEPND-------FTFTSILSACTGSGALGQGRSA---HCQTIRMGFFSYIQVANS 276
M + + ND F+FTS++ AC G+LG R A H ++GF + NS
Sbjct: 133 M---IRDTNDGGKNYDPFSFTSVMKAC---GSLGDSRLAIQLHALVSKLGFGMETCIQNS 186
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY------------------------ 312
++ MY KCG+V+ A VF ++ + WNSMI GY
Sbjct: 187 VVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSW 246
Query: 313 -------AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+QHG V+ + +F EM Q P+ +T+ V+S+C ++ G + +
Sbjct: 247 NTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILR 306
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+L + ++D+ + G L+ A+ K +
Sbjct: 307 MEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSL 339
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
R H Q I G S + + N+L+ MY CG +A VF H ++I +WN+MI
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
A LF+E M RVK D++++ +IS G
Sbjct: 87 SSRMSDAEKLFDE-MPVRVK-DSVSWTTMISGYSQNGF 122
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 232/404 (57%), Gaps = 23/404 (5%)
Query: 129 ERLKVDASFLSTAV-TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV-- 185
ER K+ F V +C N+ G ++ GF V V ++L+ +Y CR
Sbjct: 3 ERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGE 62
Query: 186 --IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
I A KVF+EM + VSW+A+I + + + + L+R M+ + P++ T S+L
Sbjct: 63 GGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVL 122
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
SACTG GAL G+ + ++++N+LI M+ KCG+V++A +F +M ++IV
Sbjct: 123 SACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIV 182
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SW S+I G A HG V A+ +FEEM++ V PD + F+G++S+C H GLV++GK YFDSM
Sbjct: 183 SWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSM 242
Query: 364 AKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA------AESRLLL 416
K + P+++HY C+VD+L RAGL++EA F+++MPI PN V+W A L L
Sbjct: 243 RKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKL 302
Query: 417 -----------EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
EP + +V L+N+YA + W++ R+R+ M KG+K PG + IE+ N
Sbjct: 303 GEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDN 362
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
+Y F A DKS+ + EI ++D + +MK GY+P E +D
Sbjct: 363 EIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLD 406
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 226/399 (56%), Gaps = 21/399 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN-VYVGSS 175
++ I + + R+ LK + S+ ++ C + G C +++GF+ + VG S
Sbjct: 485 DEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVS 544
Query: 176 LITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
L+ Y K R+ DA K+ EMP +N+V WTAI++ +AQ L + MR+ + P
Sbjct: 545 LVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHP 604
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++ TF SIL AC+ AL G+ H I+ GF SY +++I MY KCG++ + F
Sbjct: 605 DEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAF 664
Query: 295 NNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
+ K DI WNSMI G+A++G A A+ LF++M ++K D +TFLGV+ +C H GL+
Sbjct: 665 KELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLI 724
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
EG+ YFDSM+K +G+ P +DHY+C +DLLGR G L+EA++ I ++P P+ VIW
Sbjct: 725 SEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLA 784
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
AA+ + LEP+ ++T+V L+N+YA W +A R+ M++KG
Sbjct: 785 ACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKF 844
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
PGCSWI + N F +DK++ I +LD L M
Sbjct: 845 PGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRMM 883
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 9/276 (3%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
AS LS A + G A+R G ANV+VGSSLI LY+KC I DA VF+
Sbjct: 204 ASMLSAAANATAFIE----GRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFD 259
Query: 195 EMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+NVV W A++ + E+QV+ ++++ M+ LE ++FT+ S+L AC +
Sbjct: 260 CSGEKNVVMWNAMLNGLVRNEYQVE-AIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHC 318
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
GR C TI+ + + VAN+ + M+ K G +++A +FN + KD VSWN+++ G
Sbjct: 319 LGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLT 378
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ AI + + M V PD ++F VI++C + E GK KH +
Sbjct: 379 HNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHA 438
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQM---PIYPNAVI 406
S ++D + G +E R + Q+ I P V+
Sbjct: 439 VGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVL 474
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 145/295 (49%), Gaps = 2/295 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I M ++ + + D +T + +C + R G CLA++ +N VGSSL
Sbjct: 384 EEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSL 443
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I YSK + KV ++ ++V +IA Q + D ++L++ + L+P+
Sbjct: 444 IDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSS 503
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYVFN 295
FTF+SILS CTG + G+ HC T++ GF + V SL+ Y K E+A +
Sbjct: 504 FTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLI 563
Query: 296 NM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M K++V W ++++GYAQ+G + +++ F M V PD +TF ++ +C +
Sbjct: 564 EMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALS 623
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+GK + K G S ++D+ + G + + + K++ + +W +
Sbjct: 624 DGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNS 678
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 157/319 (49%), Gaps = 13/319 (4%)
Query: 100 GSSNV--FDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLS--TAVTSCGSTRNIRGGA 155
G NV ++ +L+ V + ++ ++ L+ +RL ++A + + + +C + G
Sbjct: 262 GEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGR 321
Query: 156 PYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW 215
QC+ I+ A+++V ++ + ++SK I DA +F + ++ VSW A++
Sbjct: 322 QVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNE 381
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
+ + + + + M + P++ +F ++++AC+ A G+ HC ++ S V +
Sbjct: 382 EDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGS 441
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
SLI Y K G+VE V + IV N +IAG Q+ AIDLF+++++ +KP
Sbjct: 442 SLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKP 501
Query: 336 DAITFLGVISSCRHGGLVEE--GKVYFDSMAKHGLKPELDHYSCVVDLLG---RAGLLEE 390
+ TF ++S C GL+ GK K G D S V L+G +A + E+
Sbjct: 502 SSFTFSSILSGCT--GLLSSIIGKQVHCYTLKSGFLN--DDTSVGVSLVGTYLKARMPED 557
Query: 391 ARDFIKQMPIYPNAVIWEA 409
A + +MP + N V W A
Sbjct: 558 ANKLLIEMPDHKNLVEWTA 576
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 38/206 (18%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+ F + LSAC+ GAL G+ AHC + G S A +L++MY +CG V +A
Sbjct: 27 VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF + D V W SMI+GY + G A+ LF M K PD +T + V+
Sbjct: 87 RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVV------- 139
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAE 411
C + LGR LE+AR + +MP + V W A
Sbjct: 140 -------------------------CALTALGR---LEDARTLLHRMPAPSSTVAWNAVI 171
Query: 412 SRLLLEPECAATHVQLANLYAGVRCW 437
S + + ++ LY +RCW
Sbjct: 172 SGY---AQQSGIEHEVFGLYKDMRCW 194
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 111/272 (40%), Gaps = 34/272 (12%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ +++C + G C A + G + + ++L+ +Y++C + DA +VF +
Sbjct: 34 LAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGIS 93
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ + V W ++I+ + + + + L+ M P+ T +++ A T ALG+
Sbjct: 94 LPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALT---ALGRLED 150
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
A RM S N++IS Y + +E V+
Sbjct: 151 ARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVF------------------------- 185
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
L+++M + P TF ++S+ + EG+ + +HGL + S
Sbjct: 186 -----GLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSS 240
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+++L + G + +A + N V+W A
Sbjct: 241 LINLYAKCGCIGDAI-LVFDCSGEKNVVMWNA 271
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 219/395 (55%), Gaps = 19/395 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + ++ E +K + LS+ + C + + G IR ++V++ SSL+ L
Sbjct: 293 IQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDL 352
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + A +F+ +P VVSW +I+ + E ++ L L+ MR S +EP+ TF
Sbjct: 353 YFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITF 412
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
TS+L+AC+ AL +G H I + V +L+ MY KCG V+EA VF +
Sbjct: 413 TSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPK 472
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+VSW SMI Y HG A A++LF EM++ +KPD +TFL ++S+C H GLV+EG Y
Sbjct: 473 RDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYY 532
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F+ M +G+ P ++HYSC++DLLGRAG L EA + ++Q P + V
Sbjct: 533 FNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLH 592
Query: 408 -------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
E A + + +P+ ++T++ L+N+YA WD+ VR MK+ GLK NPGCSW
Sbjct: 593 RNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSW 652
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
IEI + F ED S+ L + L +L D M+
Sbjct: 653 IEINQKILPFFVEDNSHLHLELVFKCLSYLSDHME 687
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 2/285 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGST-RNIRGGAPYQCLAIRTGFIANVYVGS 174
VE L LH LK D+ + + +CG + + G + CL ++TG + ++ VGS
Sbjct: 87 VEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCL-VKTGLMMDIVVGS 145
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL+ +Y+KC A +F EMP ++V W +I+ + Q LE + +MR EP
Sbjct: 146 SLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEP 205
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T T+ +S+C L +G H + I GF ++++L+ MY KCG++E A+ VF
Sbjct: 206 NSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVF 265
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M K +V+WNSMI+GY G ++ I LF+ M + VKP T +I C +
Sbjct: 266 EQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLL 325
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
EGK ++ ++ ++ S ++DL + G +E A + K +P
Sbjct: 326 EGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIP 370
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 145/262 (55%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++TA++SC ++ G I +GF+ + ++ S+L+ +Y KC + A +VFE+MP
Sbjct: 210 ITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMP 269
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ VV+W ++I+ + + C++L++ M N ++P T +S++ C+ S L +G+
Sbjct: 270 KKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKF 329
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H TIR S + + +SL+ +Y KCG VE A +F + +VSWN MI+GY G
Sbjct: 330 VHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGK 389
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ LF EM K V+PDAITF V+++C +E+G+ + + + L
Sbjct: 390 LFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGA 449
Query: 378 VVDLLGRAGLLEEARDFIKQMP 399
++D+ + G ++EA K +P
Sbjct: 450 LLDMYAKCGAVDEAFSVFKCLP 471
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 135/269 (50%), Gaps = 2/269 (0%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D L + +C ++++++ G + G ++++ +LI LY C + A V
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60
Query: 193 FEEMPVRNVVS-WTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSG 250
F+ M +S W ++A + + + LEL+ +++ L+P+ +T+ S+L AC G
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G+ H ++ G I V +SL+ MY KC E+A+++FN M KD+ WN++I+
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
Y Q G A++ F M + +P+++T ISSC + G + + G
Sbjct: 181 CYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ S +VD+ G+ G LE A + +QMP
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEVFEQMP 269
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 227/391 (58%), Gaps = 23/391 (5%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
ER KV + + T+ GS + G G +V VG++L+ +Y KC+ + +
Sbjct: 7 ERNKVTYVTVLSGFTTPGS---LEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEE 63
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM--LEPNDFTFTSILSAC 246
A FE++ NVVSW+A++AA+AQ M LELYR M ++ + PN TF ++L AC
Sbjct: 64 ARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDAC 123
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ GAL +GR H GF + + V N+L++ Y +CG++ +A VF+ M +D++SW+
Sbjct: 124 SFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWS 183
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AK 365
SMI+ +AQ G A++L+ M+ + PD I F+ V+ +C + G+VE +F S+
Sbjct: 184 SMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGD 243
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------E 408
++P L+HY+C+VD+LGRAG L +A D ++ MP +P +++
Sbjct: 244 TQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEA 303
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AAE L+PE ++ ++ LAN+Y+ + AAR+RKLM+++G+K PGCSWIE+++ V+
Sbjct: 304 AAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVH 363
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
F A DK + + EI + L QMK GY
Sbjct: 364 EFIAGDKMHPQRDEIYAEIQRLGRQMKEAGY 394
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+E N T+ ++LS T G+L +GR H + G + V +L++MY KC +VEEA
Sbjct: 6 VERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEAR 65
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR--VKPDAITFLGVISSCRH 349
F + ++VSW++M+A YAQ+G A A++L+ EM R + P+ +TF+ ++ +C
Sbjct: 66 AAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSF 125
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G + EG+ ++A+ G +L + +V+ GR G L +A+
Sbjct: 126 LGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAK 168
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 248/458 (54%), Gaps = 32/458 (6%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHH--DLHRERLKV-----------DASFL 138
++ + VFD++++ VV +I + DL E +K+ + L
Sbjct: 182 YSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITL 241
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+T+C +R++ TG + + S+L+ +Y KC A +F +MP
Sbjct: 242 VNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPE 301
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+N+ W +I ++ + L L+ M+ S ++ + T S+L ACT GAL G+
Sbjct: 302 KNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWL 361
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + + + +L+ MY KCG++E A+ VF M KD+++W ++I G A G
Sbjct: 362 HVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQG 421
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSC 377
++A++LF EM VKPDAITF+GV+++C H GLV EG YF+SM K+G++P ++HY C
Sbjct: 422 LKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGC 481
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYP----------------NAVIWEAAESRLL-LEPEC 420
+VD+LGRAG + EA D I+ MP+ P N V+ E A +L+ L+P+
Sbjct: 482 MVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKN 541
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
T+V L+N+Y+ ++ W+ A ++R+LM ++ +K PGCS IE+ VV+ F D S+ +
Sbjct: 542 GGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQS 601
Query: 481 SEILPVLDFLVDQMKTLGYVPEVHEEKVD-DASHKRTE 517
SEI LD ++ ++K+ GYVP+ E D D K E
Sbjct: 602 SEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENE 639
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 137/257 (53%), Gaps = 3/257 (1%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G C + + GF ++ Y+ ++L+ +YS C ++ A KVF++M ++VVSW +I A+AQ
Sbjct: 156 GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 215
Query: 214 EWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
W + ++L+R M + ++PN+ T ++L+AC S L + H G +
Sbjct: 216 -WDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTV 274
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
+ ++L+ +YCKCG A +FN M K++ WN MI G+ + A+ LF EM
Sbjct: 275 LTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG 334
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
VK D +T ++ +C H G +E GK + K ++ ++ + +VD+ + G +E A
Sbjct: 335 VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 394
Query: 393 DFIKQMPIYPNAVIWEA 409
++MP + + W A
Sbjct: 395 RVFQEMP-EKDVMTWTA 410
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 3/208 (1%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF ++P + +II + + + Y++M L+P+ FTF S+ +C G
Sbjct: 96 VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GV 152
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L +G+ HC + ++GF S + N+L++MY CG + A VF+ M K +VSW +MI
Sbjct: 153 LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 212
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
YAQ L AI LF M VKP+ IT + V+++C +E K + + G+
Sbjct: 213 YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFH 272
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMP 399
S ++D+ + G ARD +MP
Sbjct: 273 TVLTSALMDVYCKCGCYPLARDLFNKMP 300
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 11/168 (6%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK---CGNVEEAVYVFNNMHG 299
L CT + Q + H Q +R F A+ +++ +C G++ A VFN +
Sbjct: 47 LEKCT---TMSQLKQIHAQMLRTCLFVDPFSASKIVA-FCALHDSGSLPYARLVFNQIPN 102
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+ NS+I GY L +AI ++ MM Q + PD TF + SC G++ EGK
Sbjct: 103 PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQL 159
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K G + + ++++ G L AR +M + + V W
Sbjct: 160 HCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKM-VNKSVVSW 206
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 232/440 (52%), Gaps = 53/440 (12%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPY--QCLAIRTGFI--ANVYVGSSLITLYSKC- 183
ER+ +D ++ +++C + G Q ++ F+ A + V ++L+TLYSKC
Sbjct: 288 ERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCG 347
Query: 184 -----RVIID-------------------------AYKVFEEMPVRNVVSWTAIIAAFAQ 213
R I D A +VFEEMP +N +SW +++ +
Sbjct: 348 NIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVH 407
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ L+L+ MR ++P D+T+ +SAC G+L G+ H +++GF
Sbjct: 408 GGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSA 467
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
N+LI+MY +CG V+EA +F M D VSWN+MI+ QHG A++LF+ M+ + +
Sbjct: 468 GNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGI 527
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEAR 392
PD I+FL V+++C H GLV+EG YF+SM + G+ P DHY+ ++DLLGRAG + EAR
Sbjct: 528 YPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEAR 587
Query: 393 DFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVR 435
D IK MP P IWE AA+ + P+ T++ L+N Y+
Sbjct: 588 DLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAG 647
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W AARVRKLM+D+G+K PGCSWIE N V+ F D + ++ L+ + +M+
Sbjct: 648 RWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMR 707
Query: 496 TLGYVPEVHEEKVDDASHKR 515
LGYVP+ D H++
Sbjct: 708 KLGYVPDTKVVLHDMEPHQK 727
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 151/304 (49%), Gaps = 44/304 (14%)
Query: 131 LKVDASFLSTAVTSCGSTRNI--RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI-- 186
L+ D + +++ G NI R A QC +++G + V ++L+ LY KC +
Sbjct: 153 LRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEA 212
Query: 187 -IDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD--------------------------- 218
DA KV +EMP ++ ++WT ++ + + V
Sbjct: 213 TRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHS 272
Query: 219 -MCLELYRMMRNSMLEP---NDFTFTSILSACTGSGALGQGRSAHCQTIRM--GFF--SY 270
M +E + + R +LE ++FTFTS+LSAC +G G+S H Q R+ F +
Sbjct: 273 GMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAA 332
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ V N+L+++Y KCGN+ A +F+NM KD+VSWN++++GY + +A+++FEEM
Sbjct: 333 LPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPY 392
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+ + ++++ ++S HGG E+ F+ M +KP Y+ + G G L+
Sbjct: 393 K----NELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKH 448
Query: 391 ARDF 394
+
Sbjct: 449 GKQL 452
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 53/273 (19%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNS 230
+SL+ Y+ + A F+ +P R+ V A+I+A+A+ + ++R ++ +
Sbjct: 92 TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHC-----QTIRMGFFSYIQVANSLISMYCKCG 285
L P+D++FT++LSA +G L HC ++ G + V+N+L+++Y KC
Sbjct: 152 SLRPDDYSFTALLSA---AGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCE 208
Query: 286 NVE---EAVYVFNNMHGKDIVSWNSM-------------------------------IAG 311
+E +A V + M KD ++W +M I+G
Sbjct: 209 ALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISG 268
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Y G+ V A +LF M+ +RV D TF V+S+C + G GK + + L+P
Sbjct: 269 YVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITR--LQPN 326
Query: 372 ------LDHYSCVVDLLGRAGLLEEARDFIKQM 398
L + +V L + G + AR M
Sbjct: 327 FVPEAALPVNNALVTLYSKCGNIAVARRIFDNM 359
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 239/431 (55%), Gaps = 50/431 (11%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + + E + VD L+T ++ C + ++ L++++G V + +SLI++
Sbjct: 380 LELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISM 439
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------NSML 232
Y+KC + +A +F M R++VSWT ++ A++Q + E + M N+ML
Sbjct: 440 YAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAML 499
Query: 233 E-------------------------PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
P+ T+ ++ C GA G T+++G
Sbjct: 500 GAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGL 559
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
V N++I+MY KCG + EA +F+ + KD+VSWN+MI GY+QHG+ +AI++F++
Sbjct: 560 ILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDD 619
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
M+K+ KPD I+++ V+SSC H GLV+EGK YFD + + H + P L+H+SC+VDLL RAG
Sbjct: 620 MLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAG 679
Query: 387 LLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLAN 429
L EA++ I +MP+ P A +W AA+ L+ + ++ LA
Sbjct: 680 NLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAK 739
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA +A+VRKLM+DKG+K NPG SW+E+ N V+ F+AED S+ ++ I LD
Sbjct: 740 IYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDE 799
Query: 490 LVDQMKTLGYV 500
L++++ LGYV
Sbjct: 800 LMEKIAQLGYV 810
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 153/325 (47%), Gaps = 39/325 (12%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S+ D+H +++D++ ++++T+C ++ G IR+ + YV S+++ L
Sbjct: 279 LSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVEL 338
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC +A +VF + RN VSWT +I F Q LEL+ MR ++ + F
Sbjct: 339 YAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFAL 398
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+I+S C+ + R H +++ G + ++NSLISMY KCGN++ A +F++M
Sbjct: 399 ATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEE 458
Query: 300 KDIVS-------------------------------WNSMIAGYAQHGLAVRAIDLFEEM 328
+DIVS WN+M+ Y QHG + ++ M
Sbjct: 459 RDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAM 518
Query: 329 MKQR-VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
+ ++ V PD +T++ + C G + G K GL + + V+ + + G
Sbjct: 519 LTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGR 578
Query: 388 LEEAR---DFIKQMPIYPNAVIWEA 409
+ EAR DF+ + + V W A
Sbjct: 579 ISEARKIFDFLSR----KDLVSWNA 599
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
V+ +S++ Y+K + A ++FE MP R+VVSW +++A +Q + L + M
Sbjct: 227 TVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMH 286
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N + + T+TS L+AC +LG G+ H Q IR VA++++ +Y KCG +
Sbjct: 287 NRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFK 346
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
EA VF+++ ++ VSW +I G+ Q+G +++LF +M + + D +IS C
Sbjct: 347 EARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGC 405
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 140/317 (44%), Gaps = 37/317 (11%)
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIA--NVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
A SCG+ + RG + G I NV + ++ Y+K + DA ++F MP
Sbjct: 72 AYLSCGALPDARG--------LLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPR 123
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-PNDFTFTSILSACTGSGALGQGRS 257
R+V SW +++ + Q + +E + MR S PN FTF + +C GALG
Sbjct: 124 RDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSC---GALGWHEV 180
Query: 258 AHCQTI----RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
A Q + + GF VA ++ M+ +CG V+ A F+ + + NSM+AGYA
Sbjct: 181 A-LQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYA 239
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ A++LFE M ++ D +++ ++S+ G E M G++ +
Sbjct: 240 KSYGVDHALELFESMPER----DVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDST 295
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAG 433
Y+ + + L + Q+ S ++P A+ V+ LYA
Sbjct: 296 TYTSSLTACAKLSSLGWGKQLHAQV-----------IRSLPCIDPYVASAMVE---LYAK 341
Query: 434 VRCWDQAARVRKLMKDK 450
C+ +A RV ++D+
Sbjct: 342 CGCFKEARRVFSSLRDR 358
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKC--------------------------------GN 286
H + + +G S + + N+L+ Y C G+
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK-PDAITFLGVIS 345
+ +A +F M +D+ SWN++++GY Q G + A++ F M + P+A TF +
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
SC G E + K G + + D + +VD+ R G ++ A Q+
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQI 223
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 218/389 (56%), Gaps = 18/389 (4%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D S+ ++C + N+ G +A++ G VY+ +SL +Y KC + D K+
Sbjct: 230 LDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKL 289
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F R+VV+W +I A+ + + MMR P++ +++S+L +C AL
Sbjct: 290 FSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAAL 349
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
QG H Q IR GF ++VA+SLI+MY KCG++ +A +F +++V W ++IA
Sbjct: 350 YQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAAC 409
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPE 371
QHG A ++LFE+M+++ +KPD ITF+ V+S+C H G VEEG YF+SM K HG+ P
Sbjct: 410 QQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPG 469
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRL 414
+HY+C+VDLL RAG L+ A+ FI+ MPI P+A +W E A
Sbjct: 470 HEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLF 529
Query: 415 LLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
LEP+ +V L N+ ++A VR+ M+ G++ PGCSWI+I N Y F D
Sbjct: 530 DLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHD 589
Query: 475 KSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
KS+ + EI +L+ L + +K GYV E
Sbjct: 590 KSHEKTKEIYEMLEKLKELVKKKGYVAET 618
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 149/293 (50%), Gaps = 2/293 (0%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K ++ + + R + + S +++C T G L + GF+A V+V S+L+
Sbjct: 113 KALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALV 172
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPND 236
+Y+KC ++ A KVFEEMPVRN+VSW +I F Q D + ++ ++ ++ ++
Sbjct: 173 DMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDE 232
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+F+S+ SAC +G L G+ H +++G ++ + + NSL MY KCG + +F+N
Sbjct: 233 VSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSN 292
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+D+V+WN MI Y + A + F M ++ PD ++ V+ SC + + +G
Sbjct: 293 TGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQG 352
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + + + G L S ++ + + G L +A ++ N V W A
Sbjct: 353 TLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDR-NVVCWTA 404
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 125/232 (53%), Gaps = 3/232 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP--VRNVVSWTAIIAAFAQEWQVDM 219
I T ++ ++ ++L+ LY+KC + +F P +NVVSWT++I + +
Sbjct: 54 ITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFK 113
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L + MR S + PN +TF+++LSACT + A G H + GF + + V ++L+
Sbjct: 114 ALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVD 173
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP-DAI 338
MY KC ++ A VF M +++VSWN+MI G+ Q+ L +AI F+ ++ + + D +
Sbjct: 174 MYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEV 233
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+F V S+C + G +E GK K G+ + + + D+ G+ GL +
Sbjct: 234 SFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFND 285
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM- 297
TS+ S S H Q I S + N+L+++Y KCG+V++ + +F++
Sbjct: 30 LTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAP 89
Query: 298 -HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
K++VSW S+I + +A+ F M + V P+ TF V+S+C G
Sbjct: 90 DDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHG 149
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + KHG E+ S +VD+ + + A ++MP+ N V W
Sbjct: 150 EQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVR-NLVSW 199
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 223/397 (56%), Gaps = 18/397 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + +E +K D+ +++ +++ N+ G AI+ G ++V+V SL+ +
Sbjct: 431 LDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDM 490
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSK A VF MP +N+V+W ++I+ ++ +M + L + + +
Sbjct: 491 YSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSI 550
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
T++L A + AL +G++ H IR+ S +QV N+LI MY KCG ++ A +F NM
Sbjct: 551 TTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPR 610
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+++V+WNSMIAGY HG A+ LF+EM + PD +TFL +I+SC H G+VEEG
Sbjct: 611 RNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNL 670
Query: 360 FDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F M ++G++P ++HY+ VVDLLGRAG L++A FI+ MPI + +W
Sbjct: 671 FQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHR 730
Query: 408 ------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
A++ L +EP + +V L NLY V WD+AA +R MK +GLK +PGCSWI
Sbjct: 731 NMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWI 790
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
E+ N V F + D S+TR EI L L M+ G
Sbjct: 791 EVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 827
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 149/293 (50%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + ++ E K+ ++ + A T+C + G C I+ F + YV +SL
Sbjct: 226 EKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSL 285
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+T+Y+K + DA KVF+++ + V A+I+AF + L LY M+ +
Sbjct: 286 LTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDS 345
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT +S+LS C+ G+ GR+ H + I+ S + + ++L++MY KCG+ E+A VF
Sbjct: 346 FTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYT 405
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D+V+W SMIAG+ Q+ A+DLF M K+ VK D+ VIS+ VE G
Sbjct: 406 MKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELG 465
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K GL+ ++ +VD+ + G E A MP N V W +
Sbjct: 466 HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP-NKNLVAWNS 517
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 160/331 (48%), Gaps = 14/331 (4%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFL 138
+ + S + VFDQ+LD V +IS +++ + VD+ +
Sbjct: 289 YAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTI 348
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S+ ++ C + G I+ +NV + S+L+T+Y KC DA VF M
Sbjct: 349 SSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKE 408
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+VV+W ++IA F Q + L+L+R M ++ + TS++SA G + G
Sbjct: 409 RDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLI 468
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H I+ G S + VA SL+ MY K G E A VF++M K++V+WNSMI+ Y+ +GL
Sbjct: 469 HGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLP 528
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+I+L ++++ D+++ V+ + + +GK + + +L + +
Sbjct: 529 EMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENAL 588
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+D+ + G L+ A+ + MP N V W +
Sbjct: 589 IDMYVKCGCLKYAQLIFENMP-RRNLVTWNS 618
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 119/238 (50%), Gaps = 1/238 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMC 220
IR F + Y+ ++LI +YS C ++A+ +F ++ R N+V+W +I F + +
Sbjct: 169 IRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKS 228
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
LELY + +N + +FT +AC+ L GR HC I+M F V SL++M
Sbjct: 229 LELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTM 288
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G+VE+A VF+ + K++ N+MI+ + +G A A+ L+ +M D+ T
Sbjct: 289 YAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTI 348
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++S C G + G+ + K ++ + S ++ + + G E+A M
Sbjct: 349 SSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTM 406
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 31/266 (11%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP---- 197
+ +C S N+ G + G ++ Y+ +SLI +Y KC ++ A +VF++M
Sbjct: 62 LKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRD 121
Query: 198 -VRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
++ W +I + + + L + RM S G
Sbjct: 122 SAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELSWYMA--------------------G 161
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQ 314
R H IR F + +LI MY C EA +F + + +IV+WN MI G+ +
Sbjct: 162 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 221
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+G+ ++++L+ + K + +F G ++C HG +++ G+ + K + D
Sbjct: 222 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQD--DP 279
Query: 375 YSC--VVDLLGRAGLLEEARDFIKQM 398
Y C ++ + ++G +E+A+ Q+
Sbjct: 280 YVCTSLLTMYAKSGSVEDAKKVFDQV 305
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I A Q+ + LEL+ +S L FTF S+L C L GR+ H + MG
Sbjct: 27 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 86
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNM-----HGKDIVSWNSMIAGYAQHG 316
S +A SLI+MY KCG + A+ VF+ M DI WN +I GY ++G
Sbjct: 87 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYG 140
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 224/376 (59%), Gaps = 23/376 (6%)
Query: 152 RGGAPYQCLAIR-----TGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+ G P +C+ + +G + + S++I Y +C + +A +VF E +++V WTA
Sbjct: 233 KNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTA 292
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
++ +A+ + + L L+ M +EP+ +T +S++S+C +L G++ H ++I G
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG 352
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ + V+++LI MY KCG +++A VFN M +++VSWN+MI G AQ+G A++LFE
Sbjct: 353 LNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFE 412
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRA 385
M++Q+ KPD +TF+G++S+C H +E+G+ YFDS++ +HG+ P LDHY+C+V+LLGR
Sbjct: 413 NMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRT 472
Query: 386 GLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLA 428
G +E+A IK M P+ +IW AA L+P A ++ L+
Sbjct: 473 GRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLS 532
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
N+YA + W A VR LMK K +K G SWIEI N V+RF +ED+++ +I L+
Sbjct: 533 NMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLN 592
Query: 489 FLVDQMKTLGYVPEVH 504
L+ +++ G+ P +
Sbjct: 593 MLIGKLQEEGFTPNTN 608
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE + + + + + ++R G I F+ NV++ ++L +Y+KC
Sbjct: 146 MQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGE 205
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I A +F+ + +N+VSW +I+ +A+ Q + C+ L MR S P+ T ++I++A
Sbjct: 206 IEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA 265
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
YC+CG V+EA VF+ KDIV W
Sbjct: 266 -----------------------------------YCQCGRVDEARRVFSEFKEKDIVCW 290
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+M+ GYA++G A+ LF EM+ + ++PD+ T V+SSC + G+
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GL L S ++D+ + G +++AR MP N V W A
Sbjct: 351 AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNA 393
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 100/187 (53%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++L++ Y+K I + F+ MP R+ VS+ IA F+ LEL++ M+ E
Sbjct: 93 NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P ++T SIL+A L G+ H I F + + N+L MY KCG +E+A ++
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ + K++VSWN MI+GYA++G + I L +M PD +T +I++ G V
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRV 272
Query: 354 EEGKVYF 360
+E + F
Sbjct: 273 DEARRVF 279
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + +++ E ++ D+ LS+ V+SC ++ G +I G N+ V S+L
Sbjct: 304 EDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSAL 363
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKC I DA VF MP RNVVSW A+I AQ LEL+ M +P++
Sbjct: 364 IDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDN 423
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTI--RMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
TF ILSAC + QG+ + +I + G + ++++ + G +E+AV +
Sbjct: 424 VTFIGILSACLHCNWIEQGQE-YFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALI 482
Query: 295 NNM-HGKDIVSWNSMIAGYAQHGLAVRA 321
NM H D + W+++++ + G V A
Sbjct: 483 KNMAHDPDFLIWSTLLSICSTKGDIVNA 510
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N L+ +Y K G + +A +F+ M +D SWN++++ YA+ G F+ M +
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFR--- 118
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
D++++ I+ +E F M + G +P Y+ V L A LL+
Sbjct: 119 -DSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPT--EYTIVSILNASAQLLD 170
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 223/404 (55%), Gaps = 24/404 (5%)
Query: 119 LISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
I H+ L +FL+ +C +R G +++GF A+V V + LI
Sbjct: 197 FIEFRHEGWEPNLITFCAFLN----ACAGASYLRLGRQLHGFVLQSGFEADVSVANGLID 252
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
Y KC + + +F + N VSW ++I ++ Q + + ++ R +EP DF
Sbjct: 253 FYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFM 312
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+S+LSAC G L G+S H ++ I V ++L+ MY KCG++E+A F+ M
Sbjct: 313 VSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP 372
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM--KQRVKPDAITFLGVISSCRHGGLVEEG 356
+++V+WN+MI GYA G A A+ LF+EM RV P+ +TF+ V+S+C G V G
Sbjct: 373 ERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVG 432
Query: 357 KVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
F+SM ++G++P +HY+CVVDLLGRAG++E+A FIK+MPI P +W
Sbjct: 433 MEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASK 492
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AA++ L+P + HV L+N++A W++A VRK MKD G+K GC
Sbjct: 493 MFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGC 552
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SWI N V+ F+A+D S+ R SEI +L L +M+ GY+P+
Sbjct: 553 SWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPD 596
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 1/285 (0%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R+ ++ + A + GS R+ G LA++ G I++V+VG S +YSK
Sbjct: 98 NMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAG 157
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ +A K+F+EMP RN+ +W A ++ E + D L + R+ EPN TF + L+
Sbjct: 158 LTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLN 217
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC G+ L GR H ++ GF + + VAN LI Y KC V + +F+ + + VS
Sbjct: 218 ACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVS 277
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W SMI Y Q+ +A +F K+ ++P V+S+C ++E GK
Sbjct: 278 WCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAV 337
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K + + S +VD+ G+ G +E+A +MP N V W A
Sbjct: 338 KACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWNA 381
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 116/256 (45%), Gaps = 17/256 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRT------GFIANVYVGSSLITLYSKCRVIIDAYK 191
L++ V S ST+ R G I+T FI N L+ +YSK A
Sbjct: 9 LASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYN-----HLVNMYSKLDRPNSAQL 63
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+ P R+VV+WTA+IA Q + L + MR ++PNDFTF A SG+
Sbjct: 64 LLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKA---SGS 120
Query: 252 LGQ---GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
L G+ H ++ G S + V S MY K G EEA +F+ M ++I +WN+
Sbjct: 121 LRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY 180
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
++ G A+ F E + +P+ ITF +++C + G+ + + G
Sbjct: 181 LSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGF 240
Query: 369 KPELDHYSCVVDLLGR 384
+ ++ + ++D G+
Sbjct: 241 EADVSVANGLIDFYGK 256
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 236/411 (57%), Gaps = 29/411 (7%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S D+ + +K + L++ +++C + GA L+I+ G+ +++ + +S++ L
Sbjct: 251 LSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYL 310
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV-----------DMCLELYRMMR 228
Y KC +I+A K+FE M N+V+W A+IA A+ + L +++ +
Sbjct: 311 YLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLY 370
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
S ++P+ FTF+S+LS C+ AL QG H Q I+ G + + V +L+SMY KCG+++
Sbjct: 371 RSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSID 430
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A F M + ++SW SMI G+A+HGL+ +A+ LFE+M +KP+ +TF+GV+S+C
Sbjct: 431 KASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACS 490
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GL +E YF+ M K + +KP +DH++C++D+ R G +EEA D + +M PN IW
Sbjct: 491 HAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIW 550
Query: 408 E-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AAE L L+P+ T+V L N++ W ++VRKLMK++
Sbjct: 551 SMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEE 610
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
+ SWI I VY F+ DKS+ + E+ +L+ +++++K LGY P
Sbjct: 611 KVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEP 661
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 144/273 (52%), Gaps = 11/273 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + +C S ++I G I+ + +G+SL + YSK R + A K F+ +
Sbjct: 168 LGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIK 227
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++V+SWT++I++ Q L + M + ++PN++T TS+LSAC L G
Sbjct: 228 EKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQ 287
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ--- 314
H +I++G+ S I + NS++ +Y KCG + EA +F M ++V+WN+MIAG+A+
Sbjct: 288 IHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMD 347
Query: 315 --------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
H A+ +F+++ + +KPD TF V+S C + +E+G+ + K
Sbjct: 348 LAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS 407
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G+ ++ + +V + + G +++A +MP
Sbjct: 408 GVLADVVVGTALVSMYNKCGSIDKASKAFLEMP 440
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 127/248 (51%), Gaps = 1/248 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++TGF +++V + L+ +YSKC V+ A+KVF+ +P RNV +WT ++ + Q + L
Sbjct: 91 VKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLAL 150
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L+ M + P+++T +L+AC+ ++ G+ H I+ + NSL S Y
Sbjct: 151 QLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFY 210
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
K +E A+ F + KD++SW S+I+ +G A R++ F +M+ +KP+ T
Sbjct: 211 SKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLT 270
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V+S+C ++ G K G + + ++ L + G L EA+ + M
Sbjct: 271 SVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETL 330
Query: 402 PNAVIWEA 409
N V W A
Sbjct: 331 -NLVTWNA 337
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ +L C + R H ++ GF + V L+++Y KCG +E A VF+N+
Sbjct: 67 YFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 126
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+++ +W +++ GY Q+ + A+ LF +M++ P T V+++C +E GK
Sbjct: 127 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGK 185
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 237/430 (55%), Gaps = 31/430 (7%)
Query: 100 GSSNVFDQLLDTPVVDVEKLIS--MHHDLHRER----LKVD-----ASFLSTAVTSCGST 148
G+ VFD++L VV LIS + L E LK+D A+F+S V +CG
Sbjct: 158 GAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMDVVPNVATFVSVLV-ACGRM 216
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+ G L + F + VG++L+ +Y KC + +A K+F+E+P R++VSWT+II
Sbjct: 217 GYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSII 276
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ Q Q LEL+ M+ S +EP+ TS+LSAC GAL GR R G
Sbjct: 277 SGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIE 336
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
I + +L+ MY KCG +E A+++FN + ++I +WN+++ G A HG A+ FE M
Sbjct: 337 WDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELM 396
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH--GLKPELDHYSCVVDLLGRAG 386
+ ++P+ +TFL ++++C H GLV EG+ YF M P L+HY C++DLL RAG
Sbjct: 397 IGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAG 456
Query: 387 LLEEARDFIKQMPIYPNAVIWEAAESR-----------------LLLEPECAATHVQLAN 429
LL+EA FI+ MP+ P+ +IW A S L L+ + + +V L+N
Sbjct: 457 LLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSN 516
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA WD RVR+LMKDKG++ PG S IE+ + F D +++R +I +L+
Sbjct: 517 IYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNI 576
Query: 490 LVDQMKTLGY 499
L +Q+ G+
Sbjct: 577 LANQVYLEGH 586
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 152/304 (50%), Gaps = 7/304 (2%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + +C ++ G +A++ GF+ ++YV +SL+ YS C A +VF
Sbjct: 104 DMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVF 163
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+EM VR+VVSWT +I+ + + D + L+ M + PN TF S+L AC G L
Sbjct: 164 DEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMD---VVPNVATFVSVLVACGRMGYLS 220
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ H + F + V N+L+ MY KC + EA +F+ + +DIVSW S+I+G
Sbjct: 221 MGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLV 280
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q +++LF +M V+PD I V+S+C G ++ G+ + + + G++ ++
Sbjct: 281 QCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIH 340
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPEC--AATHVQLANLY 431
+ +VD+ + G +E A +P N W A L + A H +L +
Sbjct: 341 IGTALVDMYAKCGCIEMALHIFNGIP-NRNIFTWNALLGGLAMHGHGHEALKHFELM-IG 398
Query: 432 AGVR 435
AG+R
Sbjct: 399 AGIR 402
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 5/240 (2%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIID-AYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDM 219
I +G + + +V S + + K +D A+ + + + + +IAA+A
Sbjct: 29 IASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQTDLHVGTLPYNTLIAAYASSCTPKA 88
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+Y + + P+ +TF +L ACT + +G H ++MGF + V NSL+
Sbjct: 89 AFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLH 148
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
Y CG A VF+ M +D+VSW +I+GY + GL AI+LF +K V P+ T
Sbjct: 149 FYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLF---LKMDVVPNVAT 205
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
F+ V+ +C G + GK + K L + +VD+ + L EAR ++P
Sbjct: 206 FVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELP 265
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 232/393 (59%), Gaps = 25/393 (6%)
Query: 122 MHHDLHRERLKVDASFL--STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
M L R L S L S ++TS G ++ I G L + G +++ GS+LI +
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG------LMFKYGLNLDIFAGSALIDV 498
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YS C + D+ VF+EM V+++V W ++ A + Q+ + + L L+ ++ S P++FTF
Sbjct: 499 YSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
++++A ++ G+ HCQ ++ G + N+L+ MY KCG+ E+A F++
Sbjct: 559 ANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS 618
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+V WNS+I+ YA HG +A+ + E+MM + ++P+ ITF+GV+S+C H GLVE+G
Sbjct: 619 RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQ 678
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------ 407
F+ M + G++PE +HY C+V LLGRAG L +AR+ I++MP P A++W
Sbjct: 679 FELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN 738
Query: 408 -----EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIE 462
AAE +L +P+ + + L+N+YA W +A +VR+ MK +G+ PG SWI
Sbjct: 739 VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIG 798
Query: 463 IMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
I V+ F ++DKS+ + ++I VLD L+ Q++
Sbjct: 799 INKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 136/264 (51%), Gaps = 3/264 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
LK D S+ +TSC S + G I+ + YV +SLI +Y+KC + DA
Sbjct: 346 LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDAR 405
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQ---EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
KVF+ +VV + A+I +++ +W++ L ++R MR ++ P+ TF S+L A
Sbjct: 406 KVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
+LG + H + G I ++LI +Y C ++++ VF+ M KD+V WNS
Sbjct: 466 SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M AGY Q A++LF E+ R +PD TF ++++ + V+ G+ + + K G
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 368 LKPELDHYSCVVDLLGRAGLLEEA 391
L+ + ++D+ + G E+A
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDA 609
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 18/261 (6%)
Query: 104 VFDQLLDTPVVDVEKLISM--HHDLHRERLKVDASF------------LSTAVTSCGSTR 149
VF+++ + +V ++S HH ++ E L V F LS+ + +C S
Sbjct: 101 VFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC-SGL 159
Query: 150 NIRGG---APYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+ RG Q +++GF +VYVG+ LI Y K I A VF+ +P ++ V+WT
Sbjct: 160 DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTT 219
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I+ + + + L+L+ + + P+ + +++LSAC+ L G+ H +R G
Sbjct: 220 MISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG 279
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ N LI Y KCG V A +FN M K+I+SW ++++GY Q+ L A++LF
Sbjct: 280 LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFT 339
Query: 327 EMMKQRVKPDAITFLGVISSC 347
M K +KPD +++SC
Sbjct: 340 SMSKFGLKPDMYACSSILTSC 360
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 128/249 (51%), Gaps = 10/249 (4%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ----EWQVDMC 220
G + Y+ + LI LYS+ ++ A KVFE+MP RN+VSW+ +++A E + +
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF 133
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT--IRMGFFSYIQVANSLI 278
LE +R ++S PN++ +S + AC+G G+ Q+ ++ GF + V LI
Sbjct: 134 LEFWRTRKDS---PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLI 190
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
Y K GN++ A VF+ + K V+W +MI+G + G + ++ LF ++M+ V PD
Sbjct: 191 DFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGY 250
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
V+S+C +E GK + ++GL+ + + ++D + G + A M
Sbjct: 251 ILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGM 310
Query: 399 PIYPNAVIW 407
P N + W
Sbjct: 311 P-NKNIISW 318
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 103/201 (51%), Gaps = 1/201 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ +++ +L R + D + VT+ G+ +++ G + C ++ G N Y+ ++L
Sbjct: 537 EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNAL 596
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC DA+K F+ R+VV W ++I+++A + L++ M + +EPN
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNY 656
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF +LSAC+ +G + G +R G + ++S+ + G + +A +
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 297 MHGKD-IVSWNSMIAGYAQHG 316
M K + W S+++G A+ G
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAG 737
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H Q I G ++N LI++Y + G + A VF M +++VSW++M++ HG+
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 319 VRAIDLFEEMMKQRV-KPDAITFLGVISSCRHGGLVEEGKVYF----DSMAKHGLKPELD 373
++ +F E + R P+ I +C GL G+ + K G ++
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMP 399
+ ++D + G ++ AR +P
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALP 210
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 230/405 (56%), Gaps = 38/405 (9%)
Query: 91 DFTGTNSTFGSS-NVFDQLLDTPVVDVEKLIS--MHHDLHRE------------RLKVDA 135
D G NS + +FD+LL+ V +IS +DL+ E RL D
Sbjct: 205 DMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDN 264
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+ +T+CG+ +R G I GF NV SSL+ +Y KC + + ++F+
Sbjct: 265 YTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDR 324
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
M RN VSW+A++A + + + L+R M+ E + ++F +++ AC G A+ G
Sbjct: 325 MSNRNSVSWSALLAVYCHNGDYEKAVNLFREMK----EVDLYSFGTVIRACAGLAAVTPG 380
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ HCQ IR G + + V ++L+ +Y KCG + A VF+ M +++++WNSMI G+AQ+
Sbjct: 381 KEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQN 440
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDH 374
G + AI +FE M+K+ +KPD I+F+G++ +C H GLV++ + YFD M K+G+KP ++H
Sbjct: 441 GSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEH 500
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------------EAAESRLLL 416
Y+C+VDLLGRAGLLEEA + I+ ++ +W A+ + L
Sbjct: 501 YNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAKKLMEL 560
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
EP+C ++V LAN+Y V WD A +VR+LMK++ LK PG SW+
Sbjct: 561 EPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQSWM 605
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 199/434 (45%), Gaps = 43/434 (9%)
Query: 12 KKPCSALQSLKTLSIIYRSFCSQKLKQI---SSSKSLHKALRVLDIISPRTRDSTKTEVH 68
K+ CS+ S + + Y + S KL QI S L+ AL +L+ I K ++
Sbjct: 6 KRHCSS--SFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKPLLY 63
Query: 69 LRLIQDFLQTDS-------------KHLDSQKFNHD------FTGTNSTFGSSNVFDQLL 109
L+Q ++ DS L++ +F + F + + + VFD L
Sbjct: 64 ASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLF 123
Query: 110 DTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAP 156
VV +I+ + D+ ++ + LS + +C N+ G
Sbjct: 124 VKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKC 183
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
+ + +R GF +N + SSLI +Y + V DA ++F+E+ + V WT +I+AF +
Sbjct: 184 FHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDL 243
Query: 217 VDMCLELYRMM-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
+ L + + R L P+++TF S+L+AC G L QG H + I GF + +
Sbjct: 244 YEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTES 303
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
SL+ MY KCG VE++ +F+ M ++ VSW++++A Y +G +A++LF EM +
Sbjct: 304 SLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMK----EV 359
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
D +F VI +C V GK + G ++ S +VDL + G + A
Sbjct: 360 DLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVF 419
Query: 396 KQMPIYPNAVIWEA 409
+MP N + W +
Sbjct: 420 DRMPT-RNLITWNS 432
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 229/392 (58%), Gaps = 22/392 (5%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
FL AVT+ ++R G + IR+GF + +YV +SL+ LY+ C + AYKVF++M
Sbjct: 126 FLIKAVTTMA---DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P +++V+W ++I FA+ + + L LY M + ++P+ FT S+LSAC GAL G+
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H I++G + +N L+ +Y +CG VEEA +F+ M K+ VSW S+I G A +G
Sbjct: 243 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 317 LAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDH 374
AI+LF+ M + + P ITF+G++ +C H G+V+EG YF M ++ ++P ++H
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LE 417
+ C+VDLL RAG +++A ++IK MP+ PN VIW E A ++L LE
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLE 422
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
P + +V L+N+YA + W ++RK M G+K PG S +E+ N V+ F DKS+
Sbjct: 423 PNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSH 482
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
+ I L + ++++ GYVP++ VD
Sbjct: 483 PQSDAIYAKLKEMTGRLRSEGYVPQISNVYVD 514
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Query: 189 AYKVFE--EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS-MLEPNDFTFTSILSA 245
A+KVF E P+ NV W +I +A+ LYR MR S ++EP+ T+ ++ A
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
T + G + H IR GF S I V NSL+ +Y CG+V A VF+ M KD+V+W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
NS+I G+A++G A+ L+ EM + +KPD T + ++S+C G + GK M K
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
GL L + ++DL R G +EEA+ +M + N+V W
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSW 291
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++++ +++ + +K D + + +++C + G I+ G N++ + L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM-LEPN 235
+ LY++C + +A +F+EM +N VSWT++I A +EL++ M ++ L P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY------------IQVANSLISMYCK 283
+ TF IL AC+ HC ++ GF + I+ ++ + +
Sbjct: 324 EITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 372
Query: 284 CGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHG 316
G V++A +M + ++V W +++ HG
Sbjct: 373 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 221/376 (58%), Gaps = 19/376 (5%)
Query: 147 STRNIRGGAPYQCLAIRTGF-IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
++++++ G + ++ G + V V +++ YSKC + D KVF+ M R++VSWT
Sbjct: 437 ASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWT 496
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
++ A++Q + L + +MR PN FTF+S+L +C L GR H +
Sbjct: 497 TLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKA 556
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + + ++LI MY KCG++ EA VF+ + DIVSW ++I+GYAQHGL A+ LF
Sbjct: 557 GLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLF 616
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
M +K +A+T L V+ +C HGG+VEEG YF M +G+ PE++HY+C++DLLGR
Sbjct: 617 RRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGR 676
Query: 385 AGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQL 427
G L++A +FI++MP+ PN ++W+ AA L + PE +AT+V L
Sbjct: 677 VGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLL 736
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N Y ++ +R +MKD+G+K PG SWI + V++F + D+ + + EI L
Sbjct: 737 SNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKL 796
Query: 488 DFLVDQMKTLGYVPEV 503
+ L +++K +GYVP++
Sbjct: 797 EELREKIKAMGYVPDL 812
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 116/214 (54%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+YSKC A VF+EMP RNV SWT +I + + + M NS + P+ F
Sbjct: 164 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 223
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+++I+ +C G +L G+ H Q + GF ++I V+ SL++MY K G++E++ +VFN M
Sbjct: 224 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 283
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ VSWN+MI+G +GL + A DLF M P+ T + V + V GK
Sbjct: 284 EHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE 343
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ ++ G++ + + ++D+ + G L +AR
Sbjct: 344 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDAR 377
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 3/263 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S + SC ++ G + GF +++V +SL+ +Y+K I D+Y VF M
Sbjct: 225 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 284
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
N VSW A+I+ +L+ M+N PN +T S+ A + G+
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 344
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF--NNMHGKDIVSWNSMIAGYAQHG 316
+G + V +LI MY KCG++ +A VF N ++ WN+MI+GY+Q G
Sbjct: 345 QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSG 404
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY- 375
+ A++L+ +M + + D T+ V ++ ++ G+V + K GL +
Sbjct: 405 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVN 464
Query: 376 SCVVDLLGRAGLLEEARDFIKQM 398
+ + D + G LE+ R +M
Sbjct: 465 NAIADAYSKCGFLEDVRKVFDRM 487
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGF--FSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+L C G++ + ++ H ++ F + + N +Y KC A VF+ M
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+++ SW MI G +HGL F EM+ + PD + +I SC +E GK+
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + + ++++ + G +E++ ++ M N V W A
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSY-WVFNMMTEHNQVSWNA 292
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 219/395 (55%), Gaps = 18/395 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + D + + +C + R G +A++TG + YV +LI +Y++C
Sbjct: 117 EGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKTGAADHEYVLPTLINMYAECGDARS 176
Query: 189 AYKVFEEMPVRN-VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A +F +P + VVS+ A+I A + + L L+R M+ L+P T TS+LSAC
Sbjct: 177 ARAMFGRVPNGDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVLSACA 236
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
GAL GR H + G S ++V +LI MY KCG++E+A+ VF M +D +W+
Sbjct: 237 LLGALELGRWIHEYVRKAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSV 296
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI YA H AI LFEEM KQ ++PDA+TFLGV+ +C H G+V EG YFDSM ++G
Sbjct: 297 MIVAYANHSYGREAISLFEEMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSMREYG 356
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA----------------- 410
+ P + HY CV DLL R+G LE+A FI ++PI P A++W
Sbjct: 357 IVPGIKHYGCVTDLLARSGQLEKAYKFIDELPIQPTAILWRTLLSACGSHGAVDLGKRVF 416
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
E L L+ + +V +NL A W++ RVRKLM +KG+ PGCS IEI N V+ F
Sbjct: 417 ERILELDDTHGSDYVIFSNLCANTGKWEEMNRVRKLMNEKGVVKVPGCSSIEIDNRVHEF 476
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
A D + + + ++D +++Q+K +GYVP +
Sbjct: 477 FAGDGRHPQSQDARRMVDQVIEQLKLVGYVPNTSQ 511
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG----NVEEAVYVFNNMH 298
L CT AL Q H ++ G ++ + L+++ K G ++ A VF+ +
Sbjct: 26 LPHCTSLRALAQ---LHAAAVKSGLGAHPALVTRLLTLCTKQGAAPAHLAYARQVFDRIP 82
Query: 299 GK-DIVSWNSMIAGYAQHG-LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
D+V +N+++ GYA+ A A + M+++ V PD TF+ ++ +C EEG
Sbjct: 83 TPGDVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKACAAARAGEEG 142
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP-----IYPNAVIWEAAE 411
+ K G ++++ G AR ++P + NA+I A
Sbjct: 143 RQAHGVAVKTGAADHEYVLPTLINMYAECGDARSARAMFGRVPNGDCVVSYNAMITAAVR 202
Query: 412 S 412
S
Sbjct: 203 S 203
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 223/376 (59%), Gaps = 23/376 (6%)
Query: 152 RGGAPYQCLAIR-----TGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+ G P +C+ + +G + + S++I Y +C + +A +VF E +++V WTA
Sbjct: 233 KNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTA 292
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
++ +A+ + + L L+ M +EP+ +T +S++S+C +L G++ H ++I G
Sbjct: 293 MMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG 352
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ + V+++LI MY KCG +++A VFN M +++VSWN+MI G AQ+G A++LFE
Sbjct: 353 LNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFE 412
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRA 385
M++Q+ KPD +TF+G++S+C H +E+G+ YFDS+ +HG+ P LDHY+C+V+LLGR
Sbjct: 413 NMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRT 472
Query: 386 GLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLA 428
G +E+A IK M P+ +IW AA L+P A ++ L+
Sbjct: 473 GRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLS 532
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
N+YA + W A VR LMK K +K G SWIEI N V+RF +ED+++ +I L+
Sbjct: 533 NMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLN 592
Query: 489 FLVDQMKTLGYVPEVH 504
L+ +++ G+ P +
Sbjct: 593 MLIGKLQEEGFTPNTN 608
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE + + + + + ++R G I F+ NV++ ++L +Y+KC
Sbjct: 146 MQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGE 205
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I A +F+ + +N+VSW +I+ +A+ Q + C+ L MR S P+ T ++I++A
Sbjct: 206 IEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA 265
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
YC+CG V+EA VF+ KDIV W
Sbjct: 266 -----------------------------------YCQCGRVDEARRVFSEFKEKDIVCW 290
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+M+ GYA++G A+ LF EM+ + ++PD+ T V+SSC + G+
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GL L S ++D+ + G +++AR MP N V W A
Sbjct: 351 AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNA 393
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+++ ++L++ Y+K I + F+ MP R+ VS+ IA F+ LEL++ M+
Sbjct: 88 DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
EP ++T SIL+A L G+ H I F + + N+L MY KCG +E
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A ++F+ + K++VSWN MI+GYA++G + I L +M PD +T +I++
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYC 267
Query: 349 HGGLVEEGKVYF 360
G V+E + F
Sbjct: 268 QCGRVDEARRVF 279
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + +++ E ++ D+ LS+ V+SC ++ G +I G N+ V S+L
Sbjct: 304 EDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSAL 363
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKC I DA VF MP RNVVSW A+I AQ LEL+ M +P++
Sbjct: 364 IDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDN 423
Query: 237 FTFTSILSACTGSGALGQGRSAHCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF ILSAC + QG+ T + G + ++++ + G +E+AV +
Sbjct: 424 VTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIK 483
Query: 296 NM-HGKDIVSWNSMIAGYAQHGLAVRA 321
NM H D + W+++++ + G V A
Sbjct: 484 NMAHDPDFLIWSTLLSICSTKGDIVNA 510
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 91/191 (47%), Gaps = 5/191 (2%)
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND-FTFTSILSACTGSGALGQGRSAHCQ 261
++T ++ + +++ L M + + +P D F +L G L ++ +
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ FS+ N+L+S Y K G+++ F+ M +D VS+N+ IAG++ + +
Sbjct: 84 MLKRDIFSW----NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQES 139
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
++LF+ M ++ +P T + ++++ + GK S+ + ++ + D+
Sbjct: 140 LELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDM 199
Query: 382 LGRAGLLEEAR 392
+ G +E+AR
Sbjct: 200 YAKCGEIEQAR 210
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 224/390 (57%), Gaps = 17/390 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ D L +A SC G CL+++TG+ A+V+VGSSL+ +Y+KC I+ A
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F+EMP RNVV+W+ ++ +AQ + + L L++ L ND++F+S++S C S
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L GR H +I+ F S V +SL+S+Y KCG E A VFN + K++ WN+M+
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLK 291
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
YAQH + I+LF+ M +KP+ ITFL V+++C H GLV+EG+ YFD M + ++P
Sbjct: 292 AYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEP 351
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
HY+ +VD+LGRAG L+EA + I MPI P +W AA+
Sbjct: 352 TDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKV 411
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
L P + H+ L+N YA ++ AA+ RKL++D+G K G SW+E N V+ F A
Sbjct: 412 FELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAG 471
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
++ + + EI L L ++M+ GY+ +
Sbjct: 472 ERRHEKSKEIYEKLAELGEEMEKAGYIADT 501
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 153/324 (47%), Gaps = 22/324 (6%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
S TR+ G +++G V ++LI YSK ++ D+ + FE+ P ++ +
Sbjct: 24 SSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTT 83
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W++II+ FAQ M LE + M L P+D S +C GRS HC ++
Sbjct: 84 WSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSM 143
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ G+ + + V +SL+ MY KCG + A +F+ M +++V+W+ M+ GYAQ G A+
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
LF+E + + + + +F VIS C + L+E G+ K S +V L
Sbjct: 204 LFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYS 263
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
+ G+ E A ++P+ N IW A +L+ +H Q + +
Sbjct: 264 KCGVPEGAYQVFNEVPV-KNLGIWNA-----MLKAYAQHSHTQ------------KVIEL 305
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVV 467
K MK G+K N +I +NV+
Sbjct: 306 FKRMKLSGMKPN----FITFLNVL 325
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 98/169 (57%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E L V+ S+ ++ C ++ + G L+I++ F ++ +VGSSL++LYSKC V
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
AY+VF E+PV+N+ W A++ A+AQ +EL++ M+ S ++PN TF ++L+AC+
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+G + +GR Q + SL+ M + G ++EA+ V NM
Sbjct: 331 AGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNM 379
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 228/391 (58%), Gaps = 22/391 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG--FIANVYVGSSLITLYSKCRVIIDAYK 191
D S A+ +C + ++ G + R G +V VG++L+ +YSKC + +A K
Sbjct: 133 DKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARK 192
Query: 192 VFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM-LEPNDFTFTSILSACTGS 249
VF+ + + V W A+IAA+AQ + L+LYR M ++ L P TF +++ C
Sbjct: 193 VFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAEL 252
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
AL QGR+ H + F + + V+N+L+ MY KCG ++EA+ VF++M KD +SWN++I
Sbjct: 253 SALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTII 312
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGL 368
+ YA HG + +A+ L++EM Q VKP +TF+G++S+C HGGLV +G YF M H +
Sbjct: 313 SSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRI 372
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAE 411
KP + H+ C++DLLGR G L EA +K MPI NAV W AA+
Sbjct: 373 KPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAAD 432
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
+ P + +V L+N+YA W ++RK+M +G+K +PG SWIEI +VV+ F
Sbjct: 433 QVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFV 492
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ D+S+ + EI L +V++MK LGYVP+
Sbjct: 493 SGDRSHPQGEEIYVELGKMVEEMKGLGYVPD 523
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 130/243 (53%), Gaps = 6/243 (2%)
Query: 164 TGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLEL 223
+G + NV VG+++I++Y KC + DA FEE+ +N V+W A++ + + + LEL
Sbjct: 60 SGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALEL 119
Query: 224 YRMM--RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG--FFSYIQVANSLIS 279
+R M R+ P+ F+F+ + AC+ L QGR H R G + V +L++
Sbjct: 120 FREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLN 179
Query: 280 MYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDA 337
MY KCG++EEA VF+++ H D V WN+MIA YAQHG +A+DL+ M + P
Sbjct: 180 MYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQ 239
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
TF+ VI C +++G+ + L + +V + G+ G L+EA D
Sbjct: 240 GTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHS 299
Query: 398 MPI 400
M +
Sbjct: 300 MKL 302
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA--LGQGRSAHCQTIRM 265
+AAF+ L +R M S P+ TF+ IL+A GA + QGR H
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + V ++ISMY KCG +++A F + K+ V+WN+M+ Y G A++LF
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120
Query: 326 EEMMK--QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG--LKPELDHYSCVVDL 381
EM + + +PD +F I +C + +E+G+ + + + G L ++ + ++++
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G LEEAR + ++V W A
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNA 208
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 205/347 (59%), Gaps = 18/347 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
S+++ + C+ ++ A K+F+ M VRN VSW+A+I + + L+++RMM+ S ++
Sbjct: 211 STIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGID 270
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T +L AC+ AL G +H I GF + + N+LI MY KCG + A V
Sbjct: 271 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 330
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
FN M DIVSWN+MI GY HGL + A+ LF +++ +KPD ITF+ ++SSC H GLV
Sbjct: 331 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 390
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
EG+++FD+M++ + P ++H C+VD+LGRAGL++EA FI+ MP P+ IW A S
Sbjct: 391 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 450
Query: 413 RLL-----------------LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
L PE V L+N+Y+ WD AA +R KD GLK
Sbjct: 451 ACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 510
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PGCSWIEI +V+ F D+S+ +LS+I L+ L+ +MK LGY E
Sbjct: 511 PGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAE 557
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 128/233 (54%), Gaps = 7/233 (3%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
A+ V L LY C ++ A ++F+E+P +V+ W II A+A D ++LY M
Sbjct: 41 ADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSM 100
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ + PN +T+ +L AC+G A+ G H G S + V +L+ Y KCG +
Sbjct: 101 LHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGIL 160
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
EA +F++M +D+V+WN+MIAG + +GL A+ L +M ++ + P++ T +GV+ +C
Sbjct: 161 VEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTC 220
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ L+ K+ FD M G++ E+ +S ++ + ++EA D + M +
Sbjct: 221 Q--CLLYARKI-FDVM---GVRNEVS-WSAMIGGYVASDCMKEALDIFRMMQL 266
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 143/357 (40%), Gaps = 54/357 (15%)
Query: 66 EVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVV----------- 114
++H +++ DS L K + N + +FD++ + V+
Sbjct: 29 KIHQHFLKNTSNADSSVL--HKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAW 86
Query: 115 --DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
+ I ++H + ++ + + +C I G A G ++V+V
Sbjct: 87 NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
++L+ Y+KC ++++A ++F M R+VV+W A+IA + D ++L M+ +
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGI 206
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN T +L C +C + A
Sbjct: 207 CPNSSTIVGVLPTC------------------------------------QC--LLYARK 228
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F+ M ++ VSW++MI GY A+D+F M + PD T LGV+ +C H
Sbjct: 229 IFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAA 288
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ G + G + + ++D+ + G + AR+ +M + + V W A
Sbjct: 289 LQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH-DIVSWNA 344
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+ +L AC S +L + + H ++ + V + L +Y C V A +F+ +
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
++ WN +I YA +G AIDL+ M+ V+P+ T+ V+ +C G L E
Sbjct: 70 PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS-GLLAIEDG 128
Query: 358 VYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
V S AK GL+ ++ + +VD + G+L EA+ M + + V W A
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNA 180
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/379 (37%), Positives = 220/379 (58%), Gaps = 20/379 (5%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
+ +C ++N++ G ++ + V + ++LI LY KC + A K+F+E+P +N
Sbjct: 214 IVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKN 273
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V W ++I + Q ++ +EL R M S L+P+ FT + +LSAC GA G H
Sbjct: 274 TVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHR 333
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
+ G + + + +LI MY KCG + A VF+ M+ +++ +WN++++GYA HG A
Sbjct: 334 FAEKKGIWD-VFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAES 392
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVV 379
AI+LF EM + +PD+ITFL V+ +C H GLVE GK YFD M + + + P ++HY C+V
Sbjct: 393 AIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMV 452
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAA 422
DLLGRAGLL+EAR+ IK M + PN V+W AA + L
Sbjct: 453 DLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGG 512
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
++V LANLYA + +++ VR++M +KG+ + GCS IEI +VV+ F DK + R E
Sbjct: 513 SYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDVVHEFVVADKMHPRSEE 572
Query: 483 ILPVLDFLVDQMKTLGYVP 501
I VLD L ++K GYVP
Sbjct: 573 IYSVLDELSKKLKMAGYVP 591
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 4/268 (1%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C S + G + +R G+ + ++ SSL+ Y C I +A +VF+E ++VV
Sbjct: 114 ACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVF 173
Query: 204 WTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
W A+I +A++ V +++ M+ + PN+ T ++ AC S L GR+ H
Sbjct: 174 WNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYM 233
Query: 263 IR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ M +++ +LI++Y KCG ++ A +F+ + K+ V WNS+I GY Q G
Sbjct: 234 MKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEV 293
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
I+L EM +KPD T GV+S+C G G K G+ ++ + ++D+
Sbjct: 294 IELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIW-DVFIGTALIDM 352
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + AR QM N W A
Sbjct: 353 YAKCGFIGAARKVFDQMN-ERNVATWNA 379
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 117/228 (51%), Gaps = 12/228 (5%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM-LEPNDFTFTSILSACT 247
A +VF + + + A+I A++ + + +Y MR + + +T+ + AC
Sbjct: 57 ATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACA 116
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
A+ +G+ H +R+G+ + +SL++ Y CG + A VF+ KD+V WN+
Sbjct: 117 SQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNA 176
Query: 308 MIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHG-----GLVEEGKVYFD 361
+I GYA+ G+ + + +F+EM++ + V+P+ T +G+I +C G G + D
Sbjct: 177 LITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKD 236
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + G+K E + +++L + G L+ AR ++P N V+W +
Sbjct: 237 MVLREGVKLE----AALINLYVKCGYLDGARKLFDEIP-EKNTVVWNS 279
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/460 (33%), Positives = 238/460 (51%), Gaps = 57/460 (12%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + ++ + + + D V +C GG ++ GF ++VYV ++L
Sbjct: 111 EKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTL 170
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--------- 227
I +Y+ C + DA K+F+E PV + VSW +I+A + ++ + +E +++
Sbjct: 171 INMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMV 230
Query: 228 ----------RNSMLEP---------------NDFTFTSILSACTGSGALGQGRSAHCQT 262
+N M E ++ S+LSAC + G+ H
Sbjct: 231 SWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV 290
Query: 263 IRMGFFSYIQVANSLI----SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
IRMG SY+ + N+LI MY KCG VE A+ VFN M K + SWN++I G A +GL
Sbjct: 291 IRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLV 350
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSC 377
R++D+F EM V P+ ITF+GV+ +CRH GLV+EG+ +F SM KHG++P + HY C
Sbjct: 351 ERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGC 410
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPEC 420
+VDLLGRAGLL EA I+ MP+ P+ W A + L+P+
Sbjct: 411 MVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDH 470
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
HV L+N++A W+ VR +MK +G+ PGCS IE VV+ F A DK++ +
Sbjct: 471 DGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWI 530
Query: 481 SEILPVLDFLVDQMKTLGYVPEVHEEKVD-DASHKRTEPF 519
+++ +L+ + ++K GY P+ +E +D D K T F
Sbjct: 531 NKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLF 570
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 158/335 (47%), Gaps = 24/335 (7%)
Query: 127 HRERLK--VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
H+ K + S L T + +C N++ I TGFI++ + S L+ +
Sbjct: 19 HKPTFKPTITLSILETHLHNC---HNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSP 75
Query: 185 VIIDAY--KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
I Y ++F+ + N W ++ A+ Q + L LY++M + + P+++T+ +
Sbjct: 76 FIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLV 135
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
+ AC G+ H +++GF S + V N+LI+MY CGN+ +A +F+ D
Sbjct: 136 VQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDS 195
Query: 303 VSWNSMIAGYAQH---GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
VSWNS++AGY + G + A LF EM ++ D +++ +IS G+ EE V
Sbjct: 196 VSWNSILAGYVKKGDMGQVMEAWKLFNEMDEK----DMVSWSALISGYEQNGMYEEALVM 251
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPE 419
F M +G++ LD V L A L +K + VI ES + L+
Sbjct: 252 FIEMNANGMR--LDEVVVVSVLSACAHL-----SIVKTGKMIHGLVIRMGIESYVNLQN- 303
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
A H+ +++Y C + A V M++KG+ +
Sbjct: 304 -ALIHM-YSDMYMKCGCVENALEVFNGMEEKGVSS 336
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 251/473 (53%), Gaps = 62/473 (13%)
Query: 98 TFGSSNVFDQLLDTPVV---DVEKLISMHHDLHRERLKVDA----SFLSTAV-TSCGSTR 149
FG N + L T ++ ++ L+S + + R++ D SF +A+ +CG+
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFY-TRMRRDGVGPVSFTFSALFKACGAAL 156
Query: 150 NIRGGAPYQCLAIRTG-FIANVYVGSSLITLYSKCRVIIDAYKVFEEM------------ 196
N+ G I G F +++YVG+S+I LY KC + A KVF+EM
Sbjct: 157 NMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELI 216
Query: 197 -------------------PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
P +++V+WTA++ +AQ + LE ++ M++ +E ++
Sbjct: 217 VAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEV 276
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFF--SYIQVANSLISMYCKCGNVEEAVYVFN 295
T ++SAC GA+ R GF + V ++LI MY KCG+ +EA VF
Sbjct: 277 TLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFE 336
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M +++ S++SMI GYA HG A A+ LF +M+K ++P+ +TF+G++S+C H GLVE+
Sbjct: 337 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQ 396
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
G+ F M K G+ P DHY+C+VDLLGRAG LEEA D +K MP+ PN +W
Sbjct: 397 GRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGAC 456
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AA LEP ++ L+N+YA W++ +++RK++++KG K NPG
Sbjct: 457 RIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPG 516
Query: 458 CSWIEIMN-VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
CSW E N ++ F A D ++ R SEI L L++++++ GY P + D
Sbjct: 517 CSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYD 569
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYK--VFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
IR G YV + LI + +K V + +Y VF ++ N WTA+I +A + +
Sbjct: 66 IRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSE 125
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM-GFFSYIQVANSLI 278
Y MR + P FTF+++ AC + + G+ H QTI + GF S + V NS+I
Sbjct: 126 STNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMI 185
Query: 279 SMYCKC-------------------------------GNVEEAVYVFNNMHGKDIVSWNS 307
+Y KC G++E A +F+++ KD+V+W +
Sbjct: 186 DLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTA 245
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
M+ GYAQ+G A++ F++M ++ D +T GVIS+C G V+ D + G
Sbjct: 246 MVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSG 305
Query: 368 LKPELDHY--SCVVDLLGRAGLLEEARDFIKQM 398
P + S ++D+ + G +EA + M
Sbjct: 306 FGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVM 338
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 220/400 (55%), Gaps = 19/400 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+ I + ++ E +K + LS+ + C + + G IR +V+V S
Sbjct: 288 DIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNS 347
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL+ LY KC + A K+F+ +P VVSW +I+ + E ++ L L+ MR S +E
Sbjct: 348 SLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVES 407
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ TFTS+L+AC+ AL +G+ H I + V +L+ MY KCG V+EA VF
Sbjct: 408 DAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVF 467
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ +D+VSW SMI Y HG A A++LF EM++ VKPD + FL ++S+C H GLV+
Sbjct: 468 KCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVD 527
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
EG YF+ M +G+ P ++HYSC++DLLGRAG L EA + ++Q P + V
Sbjct: 528 EGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFS 587
Query: 408 ------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
E A + + +P+ ++T++ L+N+YA WD+ VR MK+ GLK N
Sbjct: 588 ACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKN 647
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
PGCSWIEI + F ED S+ L + L +L D M+
Sbjct: 648 PGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHME 687
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 145/285 (50%), Gaps = 2/285 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGST-RNIRGGAPYQCLAIRTGFIANVYVGS 174
VE L LH LK D+ + +CG R + G + CL I+TG + ++ VGS
Sbjct: 87 VEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCL-IKTGLMMDIVVGS 145
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL+ +Y KC A +F EMP ++V W +I+ + Q LE + +MR EP
Sbjct: 146 SLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEP 205
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T T+ +S+C L +G H + I GF ++++L+ MY KCG++E A+ +F
Sbjct: 206 NSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIF 265
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M K +V+WNSMI+GY G + I LF+ M + VKP T +I C +
Sbjct: 266 EQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLL 325
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
EGK ++ ++P++ S ++DL + G +E A K +P
Sbjct: 326 EGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIP 370
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 144/262 (54%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++TA++SC ++ G I +GF+ + ++ S+L+ +Y KC + A ++FE+MP
Sbjct: 210 ITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMP 269
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ VV+W ++I+ + + + C++L++ M N ++P T +S++ C+ S L +G+
Sbjct: 270 KKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKF 329
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H TIR + V +SL+ +Y KCG VE A +F + +VSWN MI+GY G
Sbjct: 330 VHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGK 389
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ LF EM K V+ DAITF V+++C +E+GK + + + L
Sbjct: 390 LFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGA 449
Query: 378 VVDLLGRAGLLEEARDFIKQMP 399
++D+ + G ++EA K +P
Sbjct: 450 LLDMYAKCGAVDEAFSVFKCLP 471
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK- 300
+L AC S +L QG+ H + + +G + I + +LI+ Y C + A VF+NM
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEE--GK 357
+I WN ++AGY ++ + V A++LFE+++ +KPD+ T+ V +C GGL GK
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKAC--GGLHRYVLGK 126
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + K GL ++ S +V + G+ E+A +MP
Sbjct: 127 MIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMP 168
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 245/448 (54%), Gaps = 34/448 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASF-------------LSTAVTSCGS 147
+ NV D++ + VV +IS + R +D L+T +TSC
Sbjct: 64 ARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSG 123
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
++I G L ++T F ++++VGSSL+ +Y+K I +A +VF+ +P R+VVS TAI
Sbjct: 124 PQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAI 183
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ +AQ+ + L+L+R + + ++ N TFT++++A +G +L G+ H +R
Sbjct: 184 ISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKEL 243
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
++ + NSLI MY KCG + + VF+NM + +VSWN+M+ GY +HGL I LF++
Sbjct: 244 PFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD 303
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
+ K+ VKPD++T L V+S C HGGLV+EG FD++ K HY C++DLLGR+G
Sbjct: 304 LHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSG 362
Query: 387 LLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLAN 429
LE+A + I+ MP IW + A+ L +EPE A +V L+N
Sbjct: 363 RLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSN 422
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA W +VRKLM +K + PG SWI + V++ F + ++ + +I +
Sbjct: 423 IYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKE 482
Query: 490 LVDQMKTLGYVPEVH--EEKVDDASHKR 515
+ +K G+VP++ VDD +R
Sbjct: 483 IFVDIKAAGFVPDLSCVLHDVDDEQKER 510
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 148/269 (55%), Gaps = 1/269 (0%)
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
A+T+C R + G I + V++G+ L+T+Y +C + DA V + MP R+
Sbjct: 16 AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
VVSWT +I+ ++Q + L+L+ M + PN++T ++L++C+G ++ QG+ H
Sbjct: 76 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 135
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
++ F S++ V +SL+ MY K N++EA VF+ + +D+VS ++I+GYAQ GL
Sbjct: 136 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 195
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
A+DLF ++ + ++ + +TF ++++ ++ GK + + L + + ++D
Sbjct: 196 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLID 255
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + G L +R M + + V W A
Sbjct: 256 MYSKCGKLLYSRRVFDNM-LERSVVSWNA 283
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 85/161 (52%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ + ++AC AL +GR H + I + + + L++MY +CG +++A V + M
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ +VSW +MI+GY+Q V A+DLF +M++ P+ T V++SC + +GK
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ K + + S ++D+ ++ ++EAR +P
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 217/359 (60%), Gaps = 20/359 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ G ++V+V SSLI Y K + +VF+EM R++V W +IIA FAQ +
Sbjct: 195 VKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAI 254
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
EL+ M+++ N T TS+L ACTG L GR H ++ + + + N+L+ MY
Sbjct: 255 ELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLILHNALLDMY 312
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
CKCG++E+A +F+ M +D++SW++M++G AQ+G +V A+ +F+ M Q V P+ +T +
Sbjct: 313 CKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMV 372
Query: 342 GVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
GV+ +C H GLVE+G YF SM + G++PE +H++C+VDLLGRAG L+EA +FI M +
Sbjct: 373 GVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSL 432
Query: 401 YPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
P++VIW AA L LEP+ V L+N YA +R W A +
Sbjct: 433 EPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKP 492
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
K M+D+G++ PG SWIE+ V+ F A D S+ I+ L+ L+ ++K+LGYVP+
Sbjct: 493 WKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQ 551
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 148/291 (50%), Gaps = 28/291 (9%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRM 226
++V +SL ++Y+K ++ DA ++F+ MPVRNVV+WT ++AA A + + L
Sbjct: 102 GGLFVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVA 161
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
MR + PN +TF+S+L ACT G L + H T++ G S + V +SLI Y K G+
Sbjct: 162 MRRDGVAPNAYTFSSVLGACTTPGML---TAVHASTVKAGLDSDVFVRSSLIDAYVKLGD 218
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ VF+ M +D+V WNS+IAG+AQ G V AI+LF M + T V+ +
Sbjct: 219 LDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRA 278
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
C ++E G+ + H LK + D ++ ++D+ + G LE+A +MP +
Sbjct: 279 CTGMVMLEAGR----QVHAHVLKYDRDLILHNALLDMYCKCGSLEDADALFHRMP-QRDV 333
Query: 405 VIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ W S L + +A RV LMK +G+ N
Sbjct: 334 ISWSTMVSGLAQNGKSV-----------------EALRVFDLMKSQGVAPN 367
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 225/390 (57%), Gaps = 18/390 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + +C S+ ++ G ++ G +NV+V ++++ +Y+KC I ++ K+FEE+P
Sbjct: 341 FASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP 400
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN V+W II + Q + + L+ M ++P + T++S+L A AL G
Sbjct: 401 DRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQ 460
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H TI+ + VANSLI MY KCG + +A F+ M+ +D VSWN+MI GY+ HG+
Sbjct: 461 IHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGM 520
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
++ A++LF+ M KP+ +TF+GV+S+C + GL+ +G+ +F+SM+K + +KP ++HY+
Sbjct: 521 SMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYT 580
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+V LLGR G +EA I ++ P+ ++W A A+ L +EP
Sbjct: 581 CMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPH 640
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
ATHV L+N+YA WD A VRK M+ K ++ PG SW+E VV+ F D S+
Sbjct: 641 DDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPD 700
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
+ I +L++L + + GYVP+ + +D
Sbjct: 701 IKLICAMLEWLNKKTRDAGYVPDCNAVLLD 730
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 141/255 (55%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S A+ SC G A++ + +++VG +L+ LY+K IIDA ++FEEMP
Sbjct: 240 ISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMP 299
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+++ W+ +IA +AQ + L+L+ MR + + PN+FTF S+L AC S +L G+
Sbjct: 300 KTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQ 359
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++ G S + V+N+++ +Y KCG +E ++ +F + ++ V+WN++I GY Q G
Sbjct: 360 IHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGD 419
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
RA++LF M++ ++P +T+ V+ + +E G K + +
Sbjct: 420 GERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANS 479
Query: 378 VVDLLGRAGLLEEAR 392
++D+ + G + +AR
Sbjct: 480 LIDMYAKCGRINDAR 494
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 128/245 (52%), Gaps = 1/245 (0%)
Query: 163 RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
+ G A+ +VG++LI YS + A VF+++ +++VSWT ++A +A+ + L+
Sbjct: 164 KLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQ 223
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
L+ MR +PN+FT + L +C G A G+S H ++ + + V +L+ +Y
Sbjct: 224 LFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYA 283
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
K G + +A +F M D++ W+ MIA YAQ + A+DLF M + V P+ TF
Sbjct: 284 KSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFAS 343
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
V+ +C ++ GK + K GL + + ++D+ + G +E + +++P
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPD-R 402
Query: 403 NAVIW 407
N V W
Sbjct: 403 NDVTW 407
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G C ++ G +++ + L+ Y + + DA K+F+EMP N +S+ + ++
Sbjct: 53 AGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYS 112
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
++ Q L + E N F FT++L + H ++G +
Sbjct: 113 RDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V +LI Y GNV+ A +VF+++ KD+VSW M+A YA++ ++ LF +M
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
KP+ T G + SC GK K +L +++L ++G + +A+
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 393 DFIKQMP 399
++MP
Sbjct: 293 RLFEEMP 299
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 214/349 (61%), Gaps = 19/349 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSML 232
+++++ Y + A + F MPVRN+VSW A++A + + + D L +++ M+ +S++
Sbjct: 175 TAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIV 234
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+PN T +S+L C+ ALG GR H +++ + V SL+SMYCKCG++ +A
Sbjct: 235 QPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACK 294
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF+ M KDIV+WN+MI+GYAQHG ++AI LFE+M + V PD IT L V+++C H GL
Sbjct: 295 VFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGL 354
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---- 407
+ G F++M + + ++P++DHYSC+VDLL RAGLLE A + I MP P+ +
Sbjct: 355 CDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLL 414
Query: 408 ---------EAAE--SRLLLE--PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
E AE +R L+E P+ A +VQLAN+YA W +RVR+ MKD +
Sbjct: 415 TACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVK 474
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
PG SW+EI V + FR+ D+ + +L I LD L MK +GYVP++
Sbjct: 475 TPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDL 523
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 93/170 (54%), Gaps = 5/170 (2%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ +AS LS+ + C + + G ++ NV VG+SL+++Y KC + DA
Sbjct: 234 VQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDAC 293
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
KVF+EM +++V+W A+I+ +AQ ++L+ M++ + P+ T ++L+AC +G
Sbjct: 294 KVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTG 353
Query: 251 ALGQGRSAHC-QTIRMGFFSYIQVA--NSLISMYCKCGNVEEAVYVFNNM 297
G C +T++ + Q+ + ++ + C+ G +E AV + ++M
Sbjct: 354 LCDFG--IQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSM 401
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 144/301 (47%), Gaps = 42/301 (13%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSM 231
++L++ + C I A +VF MPV++V SW +++ ++ + ++R+M RN++
Sbjct: 81 NTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAV 140
Query: 232 LEPNDFTFTSILSACTGSGALGQG----RSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
++ ++++A SG +G R+A +T + + +++S Y GNV
Sbjct: 141 ------SWNAMVAALACSGDMGAAEDLFRNAPEKTDAI-------LWTAMVSGYMDTGNV 187
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISS 346
++A+ F M +++VSWN+++AGY ++ A A+ +F+ M++ V+P+A T V+
Sbjct: 188 QKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLG 247
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
C + + G+ K L + + ++ + + G L +A +M + V
Sbjct: 248 CSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMST-KDIVA 306
Query: 407 WEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNV 466
W A + + YA QA ++ + MKD+G+ + WI ++ V
Sbjct: 307 WNA-----------------MISGYAQHGGGMQAIKLFEKMKDEGVVPD----WITLLAV 345
Query: 467 V 467
+
Sbjct: 346 L 346
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 230/404 (56%), Gaps = 30/404 (7%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC-----RVIIDAYKVFEEMPV 198
+C + G ++ GF + +V ++L+ +Y C + A KVF+E PV
Sbjct: 236 ACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPV 295
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
++ V+W+A+I +A+ + L+R M+ + + P++ T S+LSAC GAL G+
Sbjct: 296 KDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWL 355
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
R +++ N+LI M+ KCG+V+ AV VF M + IVSW SMI G A HG
Sbjct: 356 ESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRG 415
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSC 377
+ A+ +F+EMM+Q V PD + F+GV+S+C H GLV++G YF++M + P+++HY C
Sbjct: 416 LEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGC 475
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPEC 420
+VD+L RAG + EA +F++ MP+ PN VIW + A+ + EP
Sbjct: 476 MVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSH 535
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+ +V L+N+YA + W++ +VR++M KG++ PG + IE+ N +Y F A DKS+ +
Sbjct: 536 ESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQY 595
Query: 481 SEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRTE 517
EI +++ + ++K GYVP ++ EE +DA ++ +E
Sbjct: 596 KEIYEMVEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRHSE 639
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 222/383 (57%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+A +CG+ + R G A + G +N V +S+I+++ K + DA + FE +
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N+VS+ + + + +L + L + FTF S+LS G++ +G
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H Q +++G V N+LISMY KCG+++ A VFN M ++++SW SMI G+A+HG
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A+R ++ F +M+++ VKP+ +T++ ++S+C H GLV EG +F+SM + H +KP+++HY+
Sbjct: 556 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 615
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
C+VDLL RAGLL +A +FI MP + ++W AA L L+P
Sbjct: 616 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 675
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
A ++QL+N+YA W+++ +R+ MK++ L GCSWIE+ + +++F D ++
Sbjct: 676 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 735
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I LD L+ ++K GYVP+
Sbjct: 736 AHQIYDELDRLITEIKRCGYVPD 758
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 154/334 (46%), Gaps = 21/334 (6%)
Query: 94 GTNSTFGSSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFLST 140
G NS + VFD++ + VV +I+ M RE ++ D LS+
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFEEMP 197
++C N+ G AIR+G + +V SL+ +Y+KC + D KVF+ M
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 198 VRNVVSWTAIIAAFAQEWQVDM-CLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+V+SWTA+I + + + + L+ M+ +EPN FTF+S AC G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ Q + G S VANS+ISM+ K +E+A F ++ K++VS+N+ + G ++
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
+A L E+ ++ + A TF ++S + G + +G+ + K GL
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++ + + G ++ A M N + W +
Sbjct: 513 NALISMYSKCGSIDTASRVFNFME-NRNVISWTS 545
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 165/349 (47%), Gaps = 27/349 (7%)
Query: 67 VHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLL---DTPVVDVEKLISMH 123
VH RLI+ ++ DS +S + +G ++ + +VF+ + VV +++ +
Sbjct: 84 VHARLIEFDIEPDSVLYNSLISLYSKSGDSAK--AEDVFETMRRFGKRDVVSWSAMMACY 141
Query: 124 HDLHRE--RLKVDASFL-----------STAVTSCGSTRNIRGGAPYQCLAIRTG-FIAN 169
+ RE +KV FL + + +C ++ + G ++TG F ++
Sbjct: 142 GNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESD 201
Query: 170 VYVGSSLITLYSKCR-VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
V VG SLI ++ K +AYKVF++M NVV+WT +I Q + + M
Sbjct: 202 VCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC---G 285
S E + FT +S+ SAC L G+ H IR G ++ SL+ MY KC G
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADG 319
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQH-GLAVRAIDLFEEMMKQ-RVKPDAITFLGV 343
+V++ VF+ M ++SW ++I GY ++ LA AI+LF EM+ Q V+P+ TF
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+C + GK K GL + V+ + ++ +E+A+
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 15/308 (4%)
Query: 103 NVFDQLL--DTPVVDVEKLISMHHDLHRERLK-VDASFLSTAVTSCGSTRNIRGGAPYQC 159
NV D+L+ D+ +S + R+ ++ +D+ S+ + SC R+ R G
Sbjct: 27 NVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHA 86
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM---PVRNVVSWTAIIAAFAQEWQ 216
I + + +SLI+LYSK A VFE M R+VVSW+A++A + +
Sbjct: 87 RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGR 146
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF-SYIQVAN 275
++++ L PND+ +T+++ AC+ S +G GR ++ G F S + V
Sbjct: 147 ELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGC 206
Query: 276 SLISMYCKCGNVEEAVY-VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
SLI M+ K N E Y VF+ M ++V+W MI Q G AI F +M+ +
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE 266
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC-VVDLLGRA---GLLEE 390
D T V S+C + GK + GL +D C +VD+ + G +++
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL---VDDVECSLVDMYAKCSADGSVDD 323
Query: 391 ARDFIKQM 398
R +M
Sbjct: 324 CRKVFDRM 331
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 8/217 (3%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
++ E+ + ++ L V A ++ ++ + +IR G ++ G N V
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LI++YSKC I A +VF M RNV+SWT++I FA+ LE + M ++
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 234 PNDFTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN+ T+ +ILSAC+ G + +G R + ++ ++ + C+ G + +A
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 293 VFNNM-HGKDIVSWNSMIAGYAQHG------LAVRAI 322
N M D++ W + + H LA R I
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKI 669
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 219/390 (56%), Gaps = 18/390 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ A + G ++ G Q + ++ GF +++V S ++ +Y KC + A ++F E+P
Sbjct: 1112 LANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIP 1171
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ V+WT +I+ + Q + L Y MR S ++P+++TF +++ AC+ AL QGR
Sbjct: 1172 SPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQ 1231
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H T+++ V SL+ MY KCGN+E+A +F + I SWN+MI G AQHG
Sbjct: 1232 IHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGN 1291
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A A+ FEEM + V PD +TF+GV+S+C H GLV E F SM K +G++PE++HYS
Sbjct: 1292 AEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYS 1351
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+VD L RAG + EA I MP +A ++ AE L LEP
Sbjct: 1352 CLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPS 1411
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+A +V L+N+YA W+ A R +M+ +K +PG SW+++ N V+ F A D+S+
Sbjct: 1412 DSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEE 1471
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
I +++++ +++ GY+P+ VD
Sbjct: 1472 TDVIYNKVEYIMKRIREEGYLPDTDFALVD 1501
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 11/284 (3%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGG----APYQCLAIRTGFIANVYVGSS 175
+ M DL R L D +++ + +C S + GG A++ G + + +V ++
Sbjct: 992 VGMFVDLLRGGLLPDQFTVASVLRACSS---LGGGCHLATQIHACAMKAGVVLDSFVSTT 1048
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +YSK + +A +F ++ SW A++ + L LY +M+ S N
Sbjct: 1049 LIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERAN 1108
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T + A G L QG+ ++ GF + V + ++ MY KCG +E A +FN
Sbjct: 1109 QITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ D V+W +MI+G ++G A+ + M +V+PD TF ++ +C +E+
Sbjct: 1169 EIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQ 1228
Query: 356 GKVYFDSMAKHGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQ 397
G+ + K L D + + +VD+ + G +E+AR K+
Sbjct: 1229 GRQIHANTVK--LNCAFDPFVMTSLVDMYAKCGNIEDARGLFKR 1270
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 129/264 (48%), Gaps = 20/264 (7%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA- 212
G + +R+G V VG+ LI +Y K + A VF +M ++VSW +I+ A
Sbjct: 925 GKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCAL 984
Query: 213 ---QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG----RSAHCQTIRM 265
+E V M ++L R L P+ FT S+L AC+ +LG G H ++
Sbjct: 985 SGLEECSVGMFVDLLR----GGLLPDQFTVASVLRACS---SLGGGCHLATQIHACAMKA 1037
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G V+ +LI +Y K G +EEA ++F N G D+ SWN+M+ GY G +A+ L+
Sbjct: 1038 GVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLY 1097
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLV--EEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
M + + + IT + GGLV ++GK + K G +L S V+D+
Sbjct: 1098 ILMQESGERANQITLANAAKAA--GGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYL 1155
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW 407
+ G +E AR ++P P+ V W
Sbjct: 1156 KCGEMESARRIFNEIP-SPDDVAW 1178
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 97/181 (53%), Gaps = 4/181 (2%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP--VRNVVSWTAIIAAFAQEWQVDM 219
+ +G + ++ ++LIT+YSKC + A K+F+ P R++V+W AI++A A + +
Sbjct: 653 LTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARDG- 711
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L+R++R S + T + C S + S H +++G + VA +L++
Sbjct: 712 -FHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVN 770
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
+Y K G + EA +F+ M +D+V WN M+ Y GL A+ LF E + ++PD +T
Sbjct: 771 IYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVT 830
Query: 340 F 340
Sbjct: 831 L 831
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+V++W ++ F Q + ++ + M NS + + TF +LS G L G+ H
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+R G + V N LI+MY K G+V A VF M+ D+VSWN+MI+G A GL
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRH--GGLVEEGKVYFDSMAKHGLKPELDHYSC 377
++ +F ++++ + PD T V+ +C GG +++ +M K G+ + +
Sbjct: 990 CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAM-KAGVVLDSFVSTT 1048
Query: 378 VVDLLGRAGLLEEA 391
++D+ ++G +EEA
Sbjct: 1049 LIDVYSKSGKMEEA 1062
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 23/238 (9%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
A++ G +V+V +L+ +Y+K I +A +F+ M +R+VV W ++ A+
Sbjct: 753 AVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEA 812
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L L+ + L P+D T ++ Q + ++ + + M
Sbjct: 813 LLLFSEFNRTGLRPDDVTLCTLARVVKSK-----------QNVLEWQLKQLKAYGTKLFM 861
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y + G D+++WN ++ + Q G A+D F +M+ RV D +TF
Sbjct: 862 YDD------------DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTF 909
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++S +E GK + + GL + +C++++ + G + AR QM
Sbjct: 910 VVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM--H 298
SIL + L G+ AH + + G + N+LI+MY KCG++ A +F+
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+D+V+WN++++ +A A LF + + V T V C +
Sbjct: 691 SRDLVTWNAILSAHADK--ARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAES 748
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K GL+ ++ +V++ + G + EAR M + + V+W
Sbjct: 749 LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLR-DVVLW 796
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 223/398 (56%), Gaps = 20/398 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R+ + D L + + +CG ++ G + + G N Y+GS+LI++Y+KC +
Sbjct: 211 RDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLG 270
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A ++F+ M R+V++W A+I+ +AQ D + L+ M+ + N T T++LSAC
Sbjct: 271 SARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACA 330
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
GAL G+ + GF I VA +LI MY KCG++ A VF M K+ SWN+
Sbjct: 331 TIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNA 390
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
MI+ A HG A A+ LF+ M + +P+ ITF+G++S+C H GLV EG FD M+
Sbjct: 391 MISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMST 450
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES------------ 412
GL P+++HYSC+VDLL RAG L EA D I++MP P+ V A
Sbjct: 451 LFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGE 510
Query: 413 ---RLLLE--PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
R++LE P + ++ + +YA + W+ +AR+R LM+ KG+ PGCSWIE+ N +
Sbjct: 511 RVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHL 570
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
+ F A D ++ ++D L +++K GYVP+V E
Sbjct: 571 HEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVPKVVE 608
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 2/272 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
SC + + L + ++ + SLIT+YS+C + A KVF+E+P R++VS
Sbjct: 125 SCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVS 184
Query: 204 WTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
W ++IA +A+ +E++ M R EP++ + S+L AC G L GR
Sbjct: 185 WNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 244
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+ G + ++LISMY KCG++ A +F+ M +D+++WN++I+GYAQ+G+A AI
Sbjct: 245 VERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAI 304
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
LF M + V + IT V+S+C G ++ GK + ++ G + ++ + ++D+
Sbjct: 305 SLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMY 364
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ G L A+ K+MP N W A S L
Sbjct: 365 AKCGSLASAQRVFKEMP-QKNEASWNAMISAL 395
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 110/218 (50%), Gaps = 10/218 (4%)
Query: 197 PVRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
P N ++ +I A W + L L+ M + L PN+FTF +C L
Sbjct: 76 PHPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPA 135
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R+AH ++ S +SLI+MY +CG V A VF+ + +D+VSWNSMIAGYA+
Sbjct: 136 RAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKA 195
Query: 316 GLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
G A A+++F EM ++ +PD ++ + V+ +C G +E G+ + + G+ L+
Sbjct: 196 GCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMT--LNS 253
Query: 375 Y--SCVVDLLGRAGLLEEARDFIKQMP----IYPNAVI 406
Y S ++ + + G L AR M I NAVI
Sbjct: 254 YIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVI 291
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/367 (37%), Positives = 217/367 (59%), Gaps = 18/367 (4%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
A++ G +V+V ++L+ Y+KC I + ++FE + RN VSW II ++ Q +
Sbjct: 274 ALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERA 333
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L L+ M ++ + T++SIL AC AL G HC T + + + V N+LI M
Sbjct: 334 LSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDM 393
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KCG++++A ++F+ + +D VSWN++I GY+ HGL V AI +F M + + KPD +TF
Sbjct: 394 YAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTF 453
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+GV+S+C + G ++EGK YF SM + +G++P ++HY+C+V L+GR+G L++A FI+ +P
Sbjct: 454 VGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIP 513
Query: 400 IYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
P+ +IW A A+ L LEP A+HV L+N+YA R W A
Sbjct: 514 FEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAY 573
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VRK MK KG+K PG SWIE V+ F D S+ L I +L+FL + + GY P+
Sbjct: 574 VRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQ 633
Query: 503 VHEEKVD 509
++ +D
Sbjct: 634 LNAVLLD 640
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 148/272 (54%), Gaps = 1/272 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ + +C +N G C ++T + ++YVG L+ LY++C DA++ F +MP
Sbjct: 150 FAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMP 209
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+V+ W+ +I+ FAQ Q + LE++ MR + + PN FTF+S+L A +L ++
Sbjct: 210 KNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKT 269
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++ G + + V+N+L++ Y KCG +E+++ +F + ++ VSWN++I Y Q G
Sbjct: 270 IHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGD 329
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
RA+ LF M++ +V+ +T+ ++ +C +E G AK ++ +
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNA 389
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ + G +++AR F+ M + V W A
Sbjct: 390 LIDMYAKCGSIKDAR-FMFDMLDLRDKVSWNA 420
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 140/273 (51%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
LH E +++ +T + S G ++ G+ +N ++G++LI YS
Sbjct: 37 LHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGC 96
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A +VF+E+ +++VSWT +IA++A+ LE + MR + +PN+FTF +L A
Sbjct: 97 VSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKA 156
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G G++ HC ++ + + V L+ +Y +CG+ ++A F +M D++ W
Sbjct: 157 CLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPW 216
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+ MI+ +AQ G + +A+++F +M + V P+ TF V+ + ++ K K
Sbjct: 217 SFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALK 276
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
GL ++ + ++ + G +E++ + + +
Sbjct: 277 AGLSTDVFVSNALMACYAKCGCIEQSMELFEAL 309
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 3/224 (1%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+EMP RN VS+ +I +AQ + EL+ + E N F FT++L
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
GR H +++G+ S + +LI Y G V A VF+ + KD+VSW MIA
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
YA++ A++ F +M KP+ TF GV+ +C + GK S+ K + +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI-WEAAESRL 414
L +++L R G ++A MP N VI W SR
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMP--KNDVIPWSFMISRF 223
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 106/203 (52%), Gaps = 2/203 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D E+ +S+ ++ R +++ S+ + +C + + G CL +T + +V VG+
Sbjct: 329 DGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGN 388
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+LI +Y+KC I DA +F+ + +R+ VSW AII ++ ++++ +M+ + +P
Sbjct: 389 ALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKP 448
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYV 293
++ TF +LSAC+ +G L +G+ + G ++ ++ + + GN+++AV
Sbjct: 449 DELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKF 508
Query: 294 FNNM-HGKDIVSWNSMIAGYAQH 315
++ ++ W +++ H
Sbjct: 509 IEDIPFEPSVMIWRALLGACVIH 531
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 236/411 (57%), Gaps = 29/411 (7%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S D+ + +K + L++ +++C + GA L+I+ G+ +++ + +S++ L
Sbjct: 245 LSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYL 304
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV-----------DMCLELYRMMR 228
Y KC +I+A K+FE M N+V+W A+IA A+ + L +++ +
Sbjct: 305 YLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLY 364
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
S ++P+ FTF+S+LS C+ AL QG H Q I+ G + + V +L+SMY KCG+++
Sbjct: 365 RSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSID 424
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A F M + ++SW SMI G+A+HGL+ +A+ LFE+M +KP+ +TF+GV+S+C
Sbjct: 425 KASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACS 484
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GL +E YF+ M K + +KP +DH++C++D+ R G +EEA D + +M PN IW
Sbjct: 485 HAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIW 544
Query: 408 E-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AAE L L+P+ T+V L N++ W ++VRKLMK++
Sbjct: 545 SMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEE 604
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
+ SWI I VY F+ DKS+ + E+ +L+ +++++K LGY P
Sbjct: 605 KVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEP 655
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 144/273 (52%), Gaps = 11/273 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + +C S ++I G I+ + +G+SL + YSK R + A K F+ +
Sbjct: 162 LGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIK 221
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++V+SWT++I++ Q L + M + ++PN++T TS+LSAC L G
Sbjct: 222 EKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQ 281
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ--- 314
H +I++G+ S I + NS++ +Y KCG + EA +F M ++V+WN+MIAG+A+
Sbjct: 282 IHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMD 341
Query: 315 --------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
H A+ +F+++ + +KPD TF V+S C + +E+G+ + K
Sbjct: 342 LAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS 401
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G+ ++ + +V + + G +++A +MP
Sbjct: 402 GVLADVVVGTALVSMYNKCGSIDKASKAFLEMP 434
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 127/248 (51%), Gaps = 1/248 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++TGF +++V + L+ +YSKC V+ A+KVF+ +P RNV +WT ++ + Q + L
Sbjct: 85 VKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLAL 144
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L+ M + P+++T +L+AC+ ++ G+ H I+ + NSL S Y
Sbjct: 145 QLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFY 204
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
K +E A+ F + KD++SW S+I+ +G A R++ F +M+ +KP+ T
Sbjct: 205 SKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLT 264
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V+S+C ++ G K G + + ++ L + G L EA+ + M
Sbjct: 265 SVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETL 324
Query: 402 PNAVIWEA 409
N V W A
Sbjct: 325 -NLVTWNA 331
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ +L C + R H ++ GF + V L+++Y KCG +E A VF+N+
Sbjct: 61 YFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 120
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+++ +W +++ GY Q+ + A+ LF +M++ P T V+++C +E GK
Sbjct: 121 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGK 179
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 241/464 (51%), Gaps = 66/464 (14%)
Query: 105 FDQLLDTPVVDVEKLISMHHD--------------LHRERLKVDASFLSTAVTSCGSTRN 150
F+Q+ + +V +IS ++ L L D L++ +++C +
Sbjct: 235 FEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEK 294
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC-----------------------RVII 187
+ G + TGF + V ++LI++YS+C ++
Sbjct: 295 LCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 188 DAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
D Y +F+ + R+VV+WTA+I + Q + L+R M PN +
Sbjct: 355 DGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSY 414
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T ++LS + +LG G+ H ++ G + V+N+LI+MY K G++ A F+ +
Sbjct: 415 TLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLI 474
Query: 298 H-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+D VSW SMI AQHG A A++LFE M+ + ++PD IT++GV S+C H GLV +G
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
+ YFD M + P L HY+C+VDL GRAGLL+EA++FI++MPI P+ V W
Sbjct: 535 RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 594
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAE LLLEPE + + LANLY+ W++AA++RK MKD +K G
Sbjct: 595 VYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGF 654
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SWIE+ + V+ F ED + + +EI + + D++K +GYVP+
Sbjct: 655 SWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPD 698
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 65/304 (21%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C I++G + +VY+ ++L+ +YSK + A K+F+EMP+R SW +++A+A+ +
Sbjct: 37 HCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDM 96
Query: 218 DMCLELY--------------------------------RMMRNSMLEPNDFTFTSILSA 245
D E + MMR +EP+ FT T++L++
Sbjct: 97 DSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREG-IEPSQFTLTNVLAS 155
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN------------------- 286
+ L G+ H +++G + V+NSL++MY KCG+
Sbjct: 156 VAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSW 215
Query: 287 ------------VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-V 333
++ A+ F M +DIV+WNSMI+GY Q G +RA+D+F +M++ +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSML 275
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
PD T V+S+C + + G+ + G + ++ + R G +E AR
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 394 FIKQ 397
I+Q
Sbjct: 336 LIEQ 339
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 231 MLEPNDFTFTSILSACTG--------SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
M P + +++L CT S + HC+ I+ G + + N+L+++Y
Sbjct: 1 MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYS 60
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG----------------------LAV- 319
K G A +F+ M + SWN++++ YA+ G + V
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVG 120
Query: 320 --------RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+AI + EMM++ ++P T V++S +E GK + K GL+
Sbjct: 121 YKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGN 180
Query: 372 LDHYSCVVDLLGRAG 386
+ + ++++ + G
Sbjct: 181 VSVSNSLLNMYAKCG 195
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 213/379 (56%), Gaps = 18/379 (4%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ CG T ++ G +R GF ++ + ++L+ +Y KC I +A +F+ R+V
Sbjct: 305 IVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDV 364
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
+ WTA+++A+AQ +D L+ MR S + P T S+LS C +GAL G+ H
Sbjct: 365 MIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 424
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
+ + +L+ MY KCG++ A +F +DI WN++I G+A HG A
Sbjct: 425 IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA 484
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVD 380
+D+F EM +Q VKP+ ITF+G++ +C H GLV EGK F+ M GL P+++HY C+VD
Sbjct: 485 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 544
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAAT 423
LLGRAGLL+EA + IK MPI PN ++W E A ++LL +EPE
Sbjct: 545 LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGY 604
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
+V ++N+YA W AA VRK MK G+K PG S IE+ V+ F D+S+ ++ I
Sbjct: 605 NVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRI 664
Query: 484 LPVLDFLVDQMKTLGYVPE 502
+L + ++ GYVP+
Sbjct: 665 NEMLAEMRRKLNEAGYVPD 683
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 152/321 (47%), Gaps = 21/321 (6%)
Query: 136 SFLSTAV-TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
+F++ +V +CG + G ++ G +V+VG++L+ +Y +C + A VF+
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
+M R+VVSW+ +I + ++ + DM LEL R M + P++ S+++ + +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 255 GRSAHCQTIRMGFFSYIQV--ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
G++ H IR ++ V +L+ MY KCG++ A +FN + K +VSW +MIAG
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
+ LF M ++ + P+ IT L +I C G ++ GK + ++G L
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYA 432
+ +VD+ G+ + AR + +IW A + + YA
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQ-NRDVMIWTA-----------------MLSAYA 375
Query: 433 GVRCWDQAARVRKLMKDKGLK 453
C DQA + M+ G++
Sbjct: 376 QANCIDQAFNLFDQMRTSGVR 396
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 162/324 (50%), Gaps = 22/324 (6%)
Query: 104 VFDQLLDTPVVDVEKLI---------SMHHDLHRE----RLKVDASFLSTAVTSCGSTRN 150
VFD++++ VV +I M +L RE +++ + + V T N
Sbjct: 151 VFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTAN 210
Query: 151 IRGGAPYQCLAIRTGFIANVYVG----SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+R G IR N ++G ++L+ +Y+KC + A ++F + + VVSWTA
Sbjct: 211 MRMGKAMHAYVIRNS--NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTA 268
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+IA + +++ +L+ M+ + PN+ T S++ C +GAL G+ H +R G
Sbjct: 269 MIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNG 328
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
F + +A +L+ MY KC ++ A +F++ +D++ W +M++ YAQ +A +LF+
Sbjct: 329 FSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFD 388
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+M V+P +T + ++S C G ++ GK + K ++ + + +VD+ + G
Sbjct: 389 QMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCG 448
Query: 387 LLEEA-RDFIKQMPIYPNAVIWEA 409
+ A R FI+ I + +W A
Sbjct: 449 DINAAGRLFIE--AISRDICMWNA 470
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 222/383 (57%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+A +CG+ + R G A + G +N V +S+I+++ K + DA + FE +
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N+VS+ + + + +L + L + FTF S+LS G++ +G
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H Q +++G V N+LISMY KCG+++ A VFN M ++++SW SMI G+A+HG
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A+R ++ F +M+++ VKP+ +T++ ++S+C H GLV EG +F+SM + H +KP+++HY+
Sbjct: 556 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 615
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
C+VDLL RAGLL +A +FI MP + ++W AA L L+P
Sbjct: 616 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 675
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
A ++QL+N+YA W+++ +R+ MK++ L GCSWIE+ + +++F D ++
Sbjct: 676 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 735
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I LD L+ ++K GYVP+
Sbjct: 736 AHQIYDELDRLITEIKRCGYVPD 758
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 149/316 (47%), Gaps = 20/316 (6%)
Query: 94 GTNSTFGSSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFLST 140
G NS + VFD++ + VV +I+ M RE ++ D LS+
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFEEMP 197
++C N+ G AIR+G + +V SL+ +Y+KC + D KVF+ M
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 198 VRNVVSWTAIIAAFAQEWQVDM-CLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+V+SWTA+I + + + + L+ M+ +EPN FTF+S AC G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ Q + G S VANS+ISM+ K +E+A F ++ K++VS+N+ + G ++
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
+A L E+ ++ + A TF ++S + G + +G+ + K GL
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 376 SCVVDLLGRAGLLEEA 391
+ ++ + + G ++ A
Sbjct: 513 NALISMYSKCGSIDTA 528
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 165/349 (47%), Gaps = 27/349 (7%)
Query: 67 VHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLL---DTPVVDVEKLISMH 123
VH RLI+ ++ DS +S + +G ++ + +VF+ + VV +++ +
Sbjct: 84 VHARLIEFDIEPDSVLYNSLISLYSKSGDSAK--AEDVFETMRRFGKRDVVSWSAMMACY 141
Query: 124 HDLHRE--RLKVDASFL-----------STAVTSCGSTRNIRGGAPYQCLAIRTG-FIAN 169
+ RE +KV FL + + +C ++ + G ++TG F ++
Sbjct: 142 GNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESD 201
Query: 170 VYVGSSLITLYSKCR-VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
V VG SLI ++ K +AYKVF++M NVV+WT +I Q + + M
Sbjct: 202 VCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC---G 285
S E + FT +S+ SAC L G+ H IR G ++ SL+ MY KC G
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADG 319
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQH-GLAVRAIDLFEEMMKQ-RVKPDAITFLGV 343
+V++ VF+ M ++SW ++I GY ++ LA AI+LF EM+ Q V+P+ TF
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+C + GK K GL + V+ + ++ +E+A+
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 15/308 (4%)
Query: 103 NVFDQLL--DTPVVDVEKLISMHHDLHRERLK-VDASFLSTAVTSCGSTRNIRGGAPYQC 159
NV D+L+ D+ +S + R+ ++ +D+ S+ + SC R+ R G
Sbjct: 27 NVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHA 86
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM---PVRNVVSWTAIIAAFAQEWQ 216
I + + +SLI+LYSK A VFE M R+VVSW+A++A + +
Sbjct: 87 RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGR 146
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF-SYIQVAN 275
++++ L PND+ +T+++ AC+ S +G GR ++ G F S + V
Sbjct: 147 ELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGC 206
Query: 276 SLISMYCKCGNVEEAVY-VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
SLI M+ K N E Y VF+ M ++V+W MI Q G AI F +M+ +
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE 266
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC-VVDLLGRA---GLLEE 390
D T V S+C + GK + GL +D C +VD+ + G +++
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL---VDDVECSLVDMYAKCSADGSVDD 323
Query: 391 ARDFIKQM 398
R +M
Sbjct: 324 CRKVFDRM 331
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
++ E+ + ++ L V A ++ ++ + +IR G ++ G N V
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LI++YSKC I A +VF M RNV+SWT++I FA+ LE + M ++
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 234 PNDFTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN+ T+ +ILSAC+ G + +G R + ++ ++ + C+ G + +A
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 293 VFNNMHGK-DIVSWNSMIAGYAQHG------LAVRAI 322
N M + D++ W + + H LA R I
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKI 669
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 229/392 (58%), Gaps = 22/392 (5%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
FL AVT+ ++R G + IR+GF + +YV +SL+ LY+ C + AYKVF++M
Sbjct: 126 FLIKAVTTMA---DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P +++V+W ++I FA+ + + L LY M + ++P+ FT S+LSAC GAL G+
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H I++G + +N L+ +Y +CG VEEA +F+ M K+ VSW S+I G A +G
Sbjct: 243 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 317 LAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDH 374
AI+LF+ M + + P ITF+G++ +C H G+V+EG YF M ++ ++P ++H
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LE 417
+ C+VDLL RAG +++A ++IK MP+ PN VIW E A ++L LE
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLE 422
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
P + +V L+N+YA + W ++RK M G+K PG S +E+ N V+ F DKS+
Sbjct: 423 PNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSH 482
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
+ I L + ++++ GYVP++ VD
Sbjct: 483 PQSDAIYAKLKEMTGRLRSEGYVPQISNVYVD 514
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Query: 189 AYKVFE--EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS-MLEPNDFTFTSILSA 245
A+KVF E P+ NV W +I +A+ LYR MR S ++EP+ T+ ++ A
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
T + G + H IR GF S I V NSL+ +Y CG+V A VF+ M KD+V+W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
NS+I G+A++G A+ L+ EM + +KPD T + ++S+C G + GK M K
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
GL L + ++DL R G +EEA+ +M + N+V W
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSW 291
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++++ +++ + +K D + + +++C + G I+ G N++ + L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM-LEPN 235
+ LY++C + +A +F+EM +N VSWT++I A +EL++ M ++ L P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY------------IQVANSLISMYCK 283
+ TF IL AC+ HC ++ GF + I+ ++ + +
Sbjct: 324 EITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 372
Query: 284 CGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHG 316
G V++A +M + ++V W +++ HG
Sbjct: 373 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 221/377 (58%), Gaps = 18/377 (4%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C R+++ G +R G + + +VGS LI +Y KC +++A VF+ + RNVV W
Sbjct: 231 CAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVW 290
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
TA++ A+ Q + L L+ M PN++TF +L+AC G AL G H + +
Sbjct: 291 TALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEK 350
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
+GF +++ V N+LI+MY K G+++ + VF +M +DI++WN+MI GY+ HGL +A+ +
Sbjct: 351 LGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQV 410
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLG 383
F++M+ P+ +TF+GV+S+ H GLV+EG Y + + ++ ++P L+HY+C+V LL
Sbjct: 411 FQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLS 470
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQ 426
RAGLL+EA +F+K + + V W AES L ++P T+
Sbjct: 471 RAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTL 530
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
L+N+YA R WD +RKLM+++ +K PG SW++I N ++ F +E ++ +I
Sbjct: 531 LSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKK 590
Query: 487 LDFLVDQMKTLGYVPEV 503
+ L+ +K LGYVP +
Sbjct: 591 VQQLLALIKPLGYVPNI 607
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 136/275 (49%), Gaps = 4/275 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+TA+++C ++ G L + G + + YV S+L+ +YS+C + A +V + +P
Sbjct: 120 FTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVP 179
Query: 198 ---VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
V ++ S+ +++ A + + + +E+ R M + + + T+ ++ C L
Sbjct: 180 GEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQL 239
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G H + +R G V + LI MY KCG V A VF+ + +++V W +++ Y Q
Sbjct: 240 GLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQ 299
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+G +++LF M ++ P+ TF ++++C + G + + K G K +
Sbjct: 300 NGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIV 359
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++++ ++G ++ + + M IY + + W A
Sbjct: 360 RNALINMYSKSGSIDSSYNVFTDM-IYRDIITWNA 393
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 126/242 (52%), Gaps = 9/242 (3%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM---RNS 230
+SL+ LY KC + A +F+ MP+RNVVSW ++A + L L++ M +N+
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
PN++ FT+ LSAC+ G + +G H + G + V ++L+ MY +C +VE A
Sbjct: 114 C--PNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELA 171
Query: 291 VYVFNNMHGK---DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ V + + G+ DI S+NS++ + G A+++ M+ + V D +T++GV+ C
Sbjct: 172 LQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLC 231
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ G + + GL + S ++D+ G+ G + AR+ + N V+W
Sbjct: 232 AQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQ-NRNVVVW 290
Query: 408 EA 409
A
Sbjct: 291 TA 292
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 24/243 (9%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTI---RMGFFSYIQVANSLISMYCKCGNVEEA 290
P+ +L C L G++ H Q + + S+I NSL+ +Y KCG + A
Sbjct: 10 PSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLA 69
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRH 349
+F+ M +++VSWN ++AGY G + + LF+ M+ Q P+ F +S+C H
Sbjct: 70 RNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSH 129
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP------IYP- 402
GG V+EG + K GL S +V + R +E A + +P I+
Sbjct: 130 GGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSY 189
Query: 403 ----NAVI-----WEAAESRLLLEPECAA----THVQLANLYAGVRCWDQAARVRKLMKD 449
NA++ EA E + EC A T+V + L A +R RV +
Sbjct: 190 NSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLR 249
Query: 450 KGL 452
GL
Sbjct: 250 GGL 252
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 110/258 (42%), Gaps = 17/258 (6%)
Query: 67 VHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVV------------ 114
VH RL++ L D + + NVFD L + VV
Sbjct: 243 VHARLLRGGLMFDE--FVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQN 300
Query: 115 -DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
E+ +++ + RE + + + +C +R G + GF +V V
Sbjct: 301 GYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVR 360
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LI +YSK I +Y VF +M R++++W A+I ++ L++++ M ++
Sbjct: 361 NALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEEC 420
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN TF +LSA + G + +G +R ++ ++++ + G ++EA
Sbjct: 421 PNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAEN 480
Query: 293 VFNNMHGK-DIVSWNSMI 309
K D+V+W +++
Sbjct: 481 FMKTTQVKWDVVAWRTLL 498
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 230/392 (58%), Gaps = 22/392 (5%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
FL AV G ++R G + IR+GF + +YV +SL+ LY+ C + AYKVF++M
Sbjct: 126 FLLKAV---GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P +++V+W ++I FA+ + + L LY M ++P+ FT S+LSAC GAL G+
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H I++G + +N L+ +Y +CG VEEA +F+ M K+ VSW S+I G A +G
Sbjct: 243 RFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 317 LAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDH 374
L AI+LF+ M K+ + P ITF+G++ +C H G+V+EG YF M+ ++ ++P ++H
Sbjct: 303 LGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEH 362
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LE 417
+ C+VDLL RAG +++A ++I +MP+ PN VIW E A ++L LE
Sbjct: 363 FGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLE 422
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
P + +V L+N+YA + W ++RK M G++ PG S +E+ N V+ F DKS+
Sbjct: 423 PNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSH 482
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
+ I L + D+++ GYVP++ VD
Sbjct: 483 PQNDMIYAKLKEMTDRLRLEGYVPQISNVYVD 514
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Query: 189 AYKVFE--EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS-MLEPNDFTFTSILSA 245
A+KVF E P+ NV W +I +A+ + LYR MR S +EP+ T+ +L A
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKA 130
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
+ G + H IR GF S I V NSL+ +Y CG+V A VF+ M KD+V+W
Sbjct: 131 VGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
NS+I G+A++G A+ L+ EM + +KPD T + ++S+C G + GK + M K
Sbjct: 191 NSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIK 250
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
GL L + ++DL R G +EEA+ +M + N+V W
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSW 291
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++++ ++ + +K D + + +++C + G + I+ G N++ + L
Sbjct: 204 EEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVL 263
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM-LEPN 235
+ LY++C + +A +F+EM +N VSWT++I A +EL++ M + L P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPC 323
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY------------IQVANSLISMYCK 283
+ TF IL AC+ HC ++ GF + I+ ++ + +
Sbjct: 324 EITFVGILYACS-----------HCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLAR 372
Query: 284 CGNVEEAV-YVFNNMHGKDIVSWNSMIAGYAQHG 316
G V++A Y+ ++V W +++ HG
Sbjct: 373 AGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHG 406
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 237/433 (54%), Gaps = 36/433 (8%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD++ D +V +IS + ++ E + D L + + +CG +
Sbjct: 185 VFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGD 244
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G + + N Y+GS+LI +Y KC +I A +VF+ MP ++VV+W AII
Sbjct: 245 LGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITG 304
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+AQ + + L+ MR + P+ T +LSAC+ GAL G+ G
Sbjct: 305 YAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHD 364
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ VA++LI MY KCG++++AV VF +M K+ VSWN+MI+ A HG A A+ LF M K
Sbjct: 365 VYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSK 424
Query: 331 QR--VKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGL 387
V+P+ ITF+GV+S+C H GLV+EG+ F+SM GL P+++HYSC+VDL RAGL
Sbjct: 425 DNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGL 484
Query: 388 LEEARDFIKQMPIYPNAVI----WEAAESR-----------LLLEPEC--AATHVQLANL 430
L EA D IK+MP P+ ++ A + R L LE E + +V + +
Sbjct: 485 LYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKI 544
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
YA +R WD +A++R LM+ G+ PGCSWI+I V+ F A D + I +L+
Sbjct: 545 YANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAGDSLHNHSMNIYQLLN-- 602
Query: 491 VDQMKTLGYVPEV 503
++MK GY+P +
Sbjct: 603 -EEMKREGYIPNI 614
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 167/314 (53%), Gaps = 5/314 (1%)
Query: 103 NVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAI 162
NV + L T + + +++ L LK + +CG+ R + G CL
Sbjct: 96 NVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVF 155
Query: 163 RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
+ G + YV SLIT+Y++C + A KVF+EM R++VSW ++I+ +++ +
Sbjct: 156 KAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIG 215
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI--RMGFFSYIQVANSLISM 280
L+ MR EP++ T S+L AC G LG GR + +M SY+ ++LI M
Sbjct: 216 LFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYM--GSALIDM 273
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KCG++ A VF++M KD+V+WN++I GYAQ+G + AI LF M + PD +T
Sbjct: 274 YGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTM 333
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ V+S+C G ++ GK ++ GL+ ++ S ++D+ + G L++A + MP
Sbjct: 334 IEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMP- 392
Query: 401 YPNAVIWEAAESRL 414
+ N V W A S L
Sbjct: 393 HKNEVSWNAMISAL 406
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 6/221 (2%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VF ++ N+ ++ ++ A W+ D C+ELY +++ L+ N+FT+ + AC
Sbjct: 83 VFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVR 142
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L G+ HC + G V +SLI+MY +CG + A VF+ M +D+VSWNSMI+
Sbjct: 143 GLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMIS 202
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY++ G AI LF EM ++ +PD +T + V+ +C G + G+ + + K
Sbjct: 203 GYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEK--KM 260
Query: 371 ELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
E++ Y S ++D+ G+ G L AR MP + V W A
Sbjct: 261 EVNSYMGSALIDMYGKCGDLISARRVFDSMP-NKDVVTWNA 300
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 245/448 (54%), Gaps = 34/448 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASF-------------LSTAVTSCGS 147
+ NV D++ + VV +IS + R +D L+T +TSC
Sbjct: 64 ARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSG 123
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
++I G L ++T F ++++VGSSL+ +Y+K I +A +VF+ +P R+VVS TAI
Sbjct: 124 PQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAI 183
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ +AQ+ + L+L+R + + ++ N TFT++++A +G +L G+ H +R
Sbjct: 184 ISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKEL 243
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
++ + NSLI MY KCG + + VF+NM + +VSWN+M+ GY +HGL I LF++
Sbjct: 244 PFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD 303
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
+ K+ VKPD++T L V+S C HGGLV+EG FD++ K HY C++DLLGR+G
Sbjct: 304 LHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSG 362
Query: 387 LLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLAN 429
LE+A + I+ MP IW + A+ L +EPE A +V L+N
Sbjct: 363 RLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSN 422
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA W +VRKLM +K + PG SWI + V++ F + ++ + +I +
Sbjct: 423 IYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKE 482
Query: 490 LVDQMKTLGYVPEVH--EEKVDDASHKR 515
+ +K G+VP++ VDD +R
Sbjct: 483 IFVDIKAAGFVPDLSCVLHDVDDEQKER 510
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 148/269 (55%), Gaps = 1/269 (0%)
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
A+T+C R + G I + V++G+ L+T+Y +C + DA V + MP R+
Sbjct: 16 AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
VVSWT +I+ ++Q + L+L+ M + PN++T ++L++C+G ++ QG+ H
Sbjct: 76 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 135
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
++ F S++ V +SL+ MY K N++EA VF+ + +D+VS ++I+GYAQ GL
Sbjct: 136 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 195
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
A+DLF ++ + ++ + +TF ++++ ++ GK + + L + + ++D
Sbjct: 196 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLID 255
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + G L +R M + + V W A
Sbjct: 256 MYSKCGKLLYSRRVFDNM-LERSVVSWNA 283
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 85/161 (52%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ + ++AC AL +GR H + I + + + L++MY +CG +++A V + M
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ +VSW +MI+GY+Q V A+DLF +M++ P+ T V++SC + +GK
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ K + + S ++D+ ++ ++EAR +P
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 227/406 (55%), Gaps = 19/406 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
DV + I + L D + + +CGS I G I+ G V +
Sbjct: 441 DVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCN 500
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
SL+T+Y+KC + DA+ VF+++ N+VSW AI++A Q Q L+++M S +
Sbjct: 501 SLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENK 560
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P++ T T+IL C +L G HC +++ G + V+N LI MY KCG+++ A V
Sbjct: 561 PDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDV 620
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F + DIVSW+S+I GYAQ GL A++LF M V+P+ +T+LGV+S+C H GLV
Sbjct: 621 FGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLV 680
Query: 354 EEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
EEG ++++M + G+ P +H SC+VDLL RAG L EA +FIK+M P+ +W+
Sbjct: 681 EEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLA 740
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
AAE+ L L+P +A V L+N++A V W + AR+R LMK G++
Sbjct: 741 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKV 800
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
PG SWI + + ++ F +ED S+ + +I +L+ L QM GY P
Sbjct: 801 PGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDP 846
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 2/294 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E L + + +++++S + +C S R+++ G +++ ++ + + +
Sbjct: 139 EALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHI 198
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC + DA K F+ M +RNVVSWT +I+ ++Q Q + + +Y M S P+
Sbjct: 199 LNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDP 258
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF SI+ AC +G + GR H I+ G+ ++ N+LISMY + G + A VF
Sbjct: 259 LTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTM 318
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV-KPDAITFLGVISSCRHGGLVEE 355
+ KD++SW SMI G+ Q G + A+ LF +M +Q +P+ F V S+CR E
Sbjct: 319 ISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEF 378
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ AK GL + + D+ + G L A Q+ P+ V W A
Sbjct: 379 GRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIE-SPDLVSWNA 431
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 21/343 (6%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAV-TSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
++E L + D+ R+ F+ +V ++C S G + + G NV+ G
Sbjct: 340 EIEALY-LFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAG 398
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
SL +Y+K + A + F ++ ++VSW AIIAAF+ V+ + + M ++ L
Sbjct: 399 CSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLM 458
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ TF S+L AC + QG H I++G V NSL++MY KC N+ +A V
Sbjct: 459 PDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNV 518
Query: 294 FNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
F ++ ++VSWN++++ QH A LF+ M+ KPD IT ++ +C
Sbjct: 519 FKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELAS 578
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+E G K GL ++ + ++D+ + G L+ ARD P+ V W S
Sbjct: 579 LEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQ-NPDIVSW----S 633
Query: 413 RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
L++ YA +A + ++MK+ G++ N
Sbjct: 634 SLIVG-------------YAQFGLGHEALNLFRMMKNLGVQPN 663
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 1/283 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + +C +I G I++G+ ++ ++LI++Y++ I+ A VF
Sbjct: 257 DPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVF 316
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGAL 252
+ ++++SW ++I F Q L L+R M R +PN+F F S+ SAC
Sbjct: 317 TMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEP 376
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
GR H + G + SL MY K G + A+ F + D+VSWN++IA +
Sbjct: 377 EFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAF 436
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
+ G AI F +MM + PD ITFL ++ +C + +G + K GL E
Sbjct: 437 SDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEA 496
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL 415
+ ++ + + L +A + K + N V W A S L
Sbjct: 497 AVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACL 539
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 217/357 (60%), Gaps = 21/357 (5%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ N +++I YS+ R + A +F +MP R+++SWT +IA ++Q Q L ++
Sbjct: 104 VRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNE 163
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M+ + ++P++ T +I+SAC GAL G+ H + MGF + + ++LI MY KCG+
Sbjct: 164 MQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGS 223
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+++++ VF + K++ WNS+I G A HG A A+ +F M ++++KP+ +TF+ V+ +
Sbjct: 224 LDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGA 283
Query: 347 CRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
C H GLVEEG+ F SM++ + PE++HY C+VDLLG+AGLLE+A + ++ M + PN+V
Sbjct: 284 CTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSV 343
Query: 406 IWEAA------------------ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
IW A ES+ +LEP + + L N+YA V W + A +R M
Sbjct: 344 IWGALLGGCKLHRNLKIAQVAVNESK-VLEPNNSGYYTLLVNMYAEVNRWSEVANIRATM 402
Query: 448 KDKGL-KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
K+ G+ KT+PG SWIE+ +++F A DKS+ EI +L L Q+K GYVPE+
Sbjct: 403 KELGVEKTSPGSSWIEMDRKIHQFAASDKSHLASDEIYTLLVELDGQLKLSGYVPEL 459
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ +++ + D ++T +++C + G A+ GF +VY+GS+LI +
Sbjct: 158 LAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDM 217
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + + VF ++ +N+ W +II A + L ++ M+ ++PN TF
Sbjct: 218 YAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTF 277
Query: 240 TSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
S+L ACT +G + +GR R I+ ++ + K G +E+A+ + +M
Sbjct: 278 ISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMR 337
Query: 299 GK-DIVSWNSMIAGYAQH 315
+ + V W +++ G H
Sbjct: 338 MEPNSVIWGALLGGCKLH 355
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M + + P FTF+S++ AC+ LG G + H + GF S++ V +L+ Y G
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
+ EA VF+ M +D+ +W +MI+ +A+ G A LF+EM
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEM 102
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 213/362 (58%), Gaps = 19/362 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+R+G +N ++ ++L+ +Y +C +++A VFE R+V+SW ++IA AQ +
Sbjct: 458 LRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAY 517
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L++ M+N LEP++ TF S+LS C AL G+ H + G + + N+LI+MY
Sbjct: 518 KLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMY 577
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK-PDAITF 340
+CG++++A VF+++ +D++SW +MI G A G ++AI+LF +M + + PD TF
Sbjct: 578 IRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTF 637
Query: 341 LGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++S+C H GLV EG F SM +++G+ P ++HY C+V LLGRA +EA I QMP
Sbjct: 638 TSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMP 697
Query: 400 IYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
P+A +WE AA + L L A ++ L+N+YA WD A+
Sbjct: 698 FPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAK 757
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+R++M+ +G++ PG SWIE+ N+++ F A D+S+ +EI L L +M+ GY P+
Sbjct: 758 IRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPD 817
Query: 503 VH 504
Sbjct: 818 TQ 819
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 155/263 (58%), Gaps = 1/263 (0%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
++LS + +C +++ + G G ++V +G++LI++Y++C + A ++F
Sbjct: 332 TYLSI-LNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYT 390
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP R+++SW AIIA +A+ + LY+ M++ ++P TF +LSAC S A G
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H +R G S +AN+L++MY +CG++ EA VF +D++SWNSMIAG+AQH
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G A LF+EM + ++PD ITF V+S C++ +E GK + + GL+ +++
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLG 570
Query: 376 SCVVDLLGRAGLLEEARDFIKQM 398
+ ++++ R G L++AR+ +
Sbjct: 571 NALINMYIRCGSLQDARNVFHSL 593
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 135/235 (57%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ G ++++ + LI +Y KCR ++DA++VF+EMP R+V+SW ++I+ +AQ+
Sbjct: 54 VEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAF 113
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L+ M+N+ PN T+ SIL+AC L G+ H Q I+ G+ +V NSL+SMY
Sbjct: 114 QLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMY 173
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++ A VF + +D+VS+N+M+ YAQ + LF +M + + PD +T++
Sbjct: 174 GKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYI 233
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
++ + +++EGK + GL ++ + +V + R G ++ A+ K
Sbjct: 234 NLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFK 288
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 137/237 (57%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
L + G +++ VG++L+T+ +C + A + F+ + R+VV + A+IAA AQ
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVE 313
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
E Y MR+ + N T+ SIL+AC+ S AL G+ H G S +Q+ N+LIS
Sbjct: 314 AFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALIS 373
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY +CG++ +A +F M +D++SWN++IAGYA+ A+ L+++M + VKP +T
Sbjct: 374 MYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVT 433
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
FL ++S+C + +GK+ + + + G+K + ++++ R G L EA++ +
Sbjct: 434 FLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFE 490
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 141/269 (52%), Gaps = 4/269 (1%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+T+C S + G I+ G+ + V +SL+++Y KC + A +VF + R+V
Sbjct: 135 LTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDV 194
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VS+ ++ +AQ+ V CL L+ M + + P+ T+ ++L A T L +G+ H
Sbjct: 195 VSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKL 254
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
T+ G S I+V +L++M +CG+V+ A F + +D+V +N++IA AQHG V A
Sbjct: 255 TVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEA 314
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ + M V + T+L ++++C +E GK+ +++ G ++ + ++ +
Sbjct: 315 FEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISM 374
Query: 382 LGRAGLLEEARDFIKQMP----IYPNAVI 406
R G L +AR+ MP I NA+I
Sbjct: 375 YARCGDLPKARELFYTMPKRDLISWNAII 403
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 21/242 (8%)
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
E + T+ ++L CT L + + H Q + G I ++N LI+MY KC +V +A
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF M +D++SWNS+I+ YAQ G +A LFEEM P+ IT++ ++++C
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+E GK + K G + + + ++ + G+ G L AR I P V+
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAG--ISPRDVVSYNTML 201
Query: 413 RLLLE----PECAA---------------THVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
L + EC T++ L + + D+ R+ KL ++GL
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261
Query: 454 TN 455
++
Sbjct: 262 SD 263
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 232/411 (56%), Gaps = 20/411 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ ++ + ++ D+ + +K D S + T V++C + +I G GF +N+ + +
Sbjct: 177 NFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVN 236
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
LI LYSKC + A +F+ + ++V+SW +I L L++ M S P
Sbjct: 237 VLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESP 296
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVY 292
ND T S+L AC GA+ GR H + G + + SLI MY KCG++E A
Sbjct: 297 NDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQ 356
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF++M + + SWN+MI G+A HG A A DLF +M K + PD ITF+G++S+C H G+
Sbjct: 357 VFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGM 416
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---- 407
++ G+ F SM++ + + P+L+HY C++DLLG GL +EA++ I+ MP+ P+ VIW
Sbjct: 417 LDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL 476
Query: 408 -------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
A++ + +EPE ++V L+N+YA WDQ A++R L+ DKG+K
Sbjct: 477 KACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKK 536
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
PGCS IEI +VV+ F DK + R EI +L+ + M+ G+VP+ E
Sbjct: 537 APGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSE 587
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 148/291 (50%), Gaps = 35/291 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE------- 194
+ SC ++ + G ++ G+ ++YV +SLI++Y++ + DA+KVF+
Sbjct: 72 LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131
Query: 195 ------------------------EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
E+ V++VVSW A+I+ + + LELY+ M +
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
++P++ T +++SAC SG++ GR H GF S I++ N LI +Y KCG VE A
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F + KD++SWN++I G+ L A+ LF+EM++ P+ +T L V+ +C H
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 311
Query: 351 GLVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G ++ G+ VY + K G+ + ++D+ + G +E A+ M
Sbjct: 312 GAIDIGRWIHVYINKRLK-GVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM 361
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 31/234 (13%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +FE + N++ W + A L+LY M + L PN ++F +L +C
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
S AL +G+ H +++G+ + V SLISMY + G +E+A VF+ + +VS+ ++
Sbjct: 78 SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137
Query: 309 IAGYAQHG-----------LAVR--------------------AIDLFEEMMKQRVKPDA 337
I GYA G ++V+ A++L+++MMK VKPD
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
T + V+S+C G +E G+ + HG + + ++DL + G +E A
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
>gi|255542634|ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548341|gb|EEF49832.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 736
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 239/430 (55%), Gaps = 31/430 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLK---------VDASFLS--TAVTSCGSTRN 150
VFD++L+ V+ +IS ++++ + L ++ +FL+ +++T+C +
Sbjct: 45 VFDEMLERNVITWTAIISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQA 104
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G L + G +N+ + S+L+ LYSKC + DA +VFE + VS T I+
Sbjct: 105 LEKGRQIHGLVWKLGIQSNLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTVILVG 164
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
F Q + +E + M N E + +++L AC +LG G+ H I+ S
Sbjct: 165 FTQNGFEEEAIEFFVKMVNIGTEVDPNMVSAVLGACGVDTSLGLGKQIHSLVIKRSLGSN 224
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V N LI+MY KCG ++E++ VFN + ++ VSWNSMIA +A+HG RA+ L+EEM++
Sbjct: 225 PFVGNGLINMYSKCGELQESIKVFNGLTCRNSVSWNSMIAAFARHGDGFRALRLYEEMIQ 284
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
+ P +TFL ++ +C H GLV++G + SM K +G+ P +HY+CVVD+LGRAGLL
Sbjct: 285 EGAVPTDLTFLSLLHACSHVGLVDKGMKFLKSMTKVYGISPRAEHYACVVDMLGRAGLLN 344
Query: 390 EARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYA 432
EA+ I+++ I P+ +IW+ AAE LLLEP+ A +V LAN+Y+
Sbjct: 345 EAKSLIERLSIKPDVLIWQALLGACSIRGDTEIGKYAAEQLLLLEPKKPAPYVLLANIYS 404
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
WD+ AR K MK+ G+ G SWIEI V+ F EDK + + I VL L
Sbjct: 405 SKGRWDERARTIKRMKEMGVAKETGISWIEIEKKVHSFVVEDKKHPQAEIIYGVLAELFR 464
Query: 493 QMKTLGYVPE 502
M GYVP+
Sbjct: 465 LMIDEGYVPD 474
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 32/262 (12%)
Query: 179 LYSKCRVIIDAYKVFEEMPVR-------------------------------NVVSWTAI 207
+Y KC V DA KVF++MP R NV++WTAI
Sbjct: 1 MYFKCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAI 60
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ +Q + L L+ MR ++EPN T+ S L+AC+G AL +GR H ++G
Sbjct: 61 ISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLVWKLGI 120
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
S + + ++L+ +Y KCG++E+A VF + D VS ++ G+ Q+G AI+ F +
Sbjct: 121 QSNLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTVILVGFTQNGFEEEAIEFFVK 180
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M+ + D V+ +C + GK + K L + ++++ + G
Sbjct: 181 MVNIGTEVDPNMVSAVLGACGVDTSLGLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGE 240
Query: 388 LEEARDFIKQMPIYPNAVIWEA 409
L+E+ + N+V W +
Sbjct: 241 LQESIKVFNGLTCR-NSVSWNS 261
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 231/431 (53%), Gaps = 32/431 (7%)
Query: 100 GSSNVFDQLLDTPVVD-------------VEKLISMHHDLHRERLKVDASFLSTAVTSCG 146
G++ VF ++ DT +V I + ++ + ++ D +++ V +C
Sbjct: 624 GATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 683
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+ ++ G I+ G +N+ V ++LI +Y+KC + +A VF ++PV+++VSW
Sbjct: 684 CSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNT 743
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I ++Q + LEL+ M+ +P+D T +L AC G AL +GR H +R G
Sbjct: 744 MIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRG 802
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+FS + VA +L+ MY KCG + A +F+ + KD++SW MIAGY HG AI F
Sbjct: 803 YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFN 862
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRA 385
EM ++PD +F ++++C H GL+ EG +F+SM G++P+L+HY+CVVDLL R
Sbjct: 863 EMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARM 922
Query: 386 GLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLA 428
G L +A FI+ MPI P+ IW + AE LEP+ +V LA
Sbjct: 923 GNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLA 982
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
N+YA W++ ++RK M+ +G K NPGCSWIE+ F A + + + I +L
Sbjct: 983 NVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLR 1042
Query: 489 FLVDQMKTLGY 499
L QM+ Y
Sbjct: 1043 KLTMQMQNEDY 1053
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 153/270 (56%), Gaps = 3/270 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++VD + L + + + + N+ G ++ F V ++L+ +YSKC + A
Sbjct: 567 VEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 626
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF +M +VSWT+ IAA+ +E + L+ M++ + P+ +T TSI+ AC S
Sbjct: 627 EVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 686
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+L +GR H I+ G S + V N+LI+MY KCG+VEEA VF+ + KDIVSWN+MI
Sbjct: 687 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY+Q+ L A++LF +M KQ KPD IT V+ +C +++G+ + + G
Sbjct: 747 GYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS 805
Query: 371 ELDHYSC-VVDLLGRAGLLEEARDFIKQMP 399
+L H +C +VD+ + GLL A+ +P
Sbjct: 806 DL-HVACALVDMYAKCGLLVLAQLLFDMIP 834
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 1/246 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ GF +N V +SLI Y K + A+ +F+E+ +VVSW ++I L
Sbjct: 497 LKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGL 556
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
E++ M +E + T S+L A G L GR+ H ++ F + +N+L+ MY
Sbjct: 557 EIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMY 616
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCGN+ A VF M IVSW S IA Y + GL AI LF+EM + V+PD T
Sbjct: 617 SKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVT 676
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
++ +C +++G+ + K+G+ L + ++++ + G +EEAR ++P+
Sbjct: 677 SIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV- 735
Query: 402 PNAVIW 407
+ V W
Sbjct: 736 KDIVSW 741
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 122/254 (48%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C +++ G + I G + +G+ L+ +Y C ++ K+F+++ V W
Sbjct: 379 CAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLW 438
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+++ +A+ + L++ M+ + N +TFT +L G + + + H ++
Sbjct: 439 NLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK 498
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
+GF S V NSLI+ Y K G VE A +F+ + D+VSWNSMI G +G + +++
Sbjct: 499 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEI 558
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F +M+ V+ D T + V+ + + G + G+ K E+ + ++D+ +
Sbjct: 559 FIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 618
Query: 385 AGLLEEARDFIKQM 398
G L A + +M
Sbjct: 619 CGNLNGATEVFVKM 632
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
A I F + + +EL ++ L N ++ S+L C +L G+ H I
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIIS 397
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G + L+ MY CG++ + +F+ + + WN +++ YA+ G ++ L
Sbjct: 398 NGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 457
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F++M K V + TF V+ G V+E K + K G + ++ +
Sbjct: 458 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 517
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G +E A + ++ P+ V W +
Sbjct: 518 FGGVESAHNLFDELS-EPDVVSWNS 541
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 217/406 (53%), Gaps = 18/406 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D K + + ++ R + D + + + +CG ++ G +R G N +V
Sbjct: 497 DPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAV 556
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL++LY C FE M +N V W A+++ ++Q + L L+R M + LEP
Sbjct: 557 SLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEP 616
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++ SIL AC+ ALG G+ HC ++ VA SL+ MY K G + + +F
Sbjct: 617 DEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIF 676
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
N ++GK++ SWN MI G+ HG +A++LFE+M + +PD TFLGV+ +C H GLV
Sbjct: 677 NRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVS 736
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
EG Y M + L+PEL+HY+CV+D+LGRAG L EA +FI +MP P+A IW
Sbjct: 737 EGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSS 796
Query: 408 -----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
+ AE L LE A +++ L+NLYA WD VR+ MKD L+ +
Sbjct: 797 SITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDV 856
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
GCSWIE+ VY F A + SN EI + + L Q+ +GY P+
Sbjct: 857 GCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPD 902
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 139/266 (52%), Gaps = 26/266 (9%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLKVDASFLSTA------------VTSCGSTR 149
VFD+LL+ + L+S + ++L+ E + +S + +C
Sbjct: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+I G +A++ G I +++VG+++I LY KC + +A ++F++MP +N++SW ++I
Sbjct: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIR 284
Query: 210 AFAQEWQVDMCLELYRMMRNSMLE------PNDFTFTSILSACTGSGALGQGRSAHCQTI 263
F++ LE YR R S+LE P+ T ++L C+G G + G H +
Sbjct: 285 GFSEN---GFWLEAYRAFR-SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAV 340
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
++G + V N+LI MY KCG + EA +F + K +VSWNSMI Y++ G D
Sbjct: 341 KLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFD 400
Query: 324 LFEEMM--KQRVKPDAITFLGVISSC 347
L +M ++ ++ + +T L ++ +C
Sbjct: 401 LLRKMWMEEELMEVNEVTILNLLPAC 426
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 142/265 (53%), Gaps = 4/265 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPY-QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+ + CG +N+ G + L + + F + + + LIT+YS C +++ VF+ +
Sbjct: 110 MGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRL 169
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+N+ W A+++ + + D + + ++ + +P++FTF ++ ACTG + G
Sbjct: 170 LNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG 229
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+S H ++MG + V N++I++Y KCG ++EAV +F+ M ++++SWNS+I G++++
Sbjct: 230 KSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSEN 289
Query: 316 GLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
G + A F +++ + PD T + ++ C G V+ G V K GL EL
Sbjct: 290 GFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELM 349
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++D+ + G L EA +++
Sbjct: 350 VCNALIDMYSKCGCLSEAAILFRKI 374
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 132/238 (55%), Gaps = 2/238 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + T + C N+ G +A++ G + + V ++LI +YSKC + +A +F
Sbjct: 312 DVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILF 371
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR--MMRNSMLEPNDFTFTSILSACTGSGA 251
++ ++VVSW ++I A+++E V +L R M ++E N+ T ++L AC
Sbjct: 372 RKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESE 431
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L R+ H ++R F + N+ I+ Y KCG++ A +VF M+ K + SWN++I G
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGG 491
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+AQ+G ++A+D + EM + + PD + + ++ +C GL++ GK + ++GL+
Sbjct: 492 HAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLE 549
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
++R F + ++ I Y+KC ++ A VF M ++V SW A+I AQ
Sbjct: 442 SLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKA 501
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L+ Y M + P+DF+ S+L AC G L G+ H +R G VA SL+S+
Sbjct: 502 LDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSL 561
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y C F M K+ V WN+M++GY+Q+ L A+ LF +M+ ++PD I
Sbjct: 562 YFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAI 621
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC-VVDLLGRAGLLEEARDFIKQM 398
++ +C + GK K+ L E + +C ++D+ ++G L ++ ++
Sbjct: 622 ASILGACSQLSALGLGKEVHCFALKNSLM-EDNFVACSLMDMYAKSGFLGHSQRIFNRL 679
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKP 335
LI+MY CG E+ VF+ + K++ WN++++GY ++ L AI F E++ +P
Sbjct: 149 LITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQP 208
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
D TF +I +C + GK K GL +L + ++ L G+ G L+EA +
Sbjct: 209 DNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELF 268
Query: 396 KQMP----IYPNAVIWEAAESRLLLE 417
+MP I N++I +E+ LE
Sbjct: 269 DKMPEQNLISWNSLIRGFSENGFWLE 294
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 230/435 (52%), Gaps = 50/435 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + +LHR + S L++ +C + + G LA++ G N + ++L
Sbjct: 401 EEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNAL 460
Query: 177 ITLYSKCR-------------------------------VIIDAYKVFEEMPVRNVVSWT 205
IT+Y KCR ++ +A F+ M R+ VSWT
Sbjct: 461 ITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWT 520
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
II+A+A Q + + ++ M PN T +L C GA G+ H I++
Sbjct: 521 TIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKL 580
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G S + VAN+LISMY KCG ++ +F+ M +DI +WN++I GYAQHGL AI ++
Sbjct: 581 GMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMY 639
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
+ M V P+ +TF+G++++C H GLV+EG +F SM++ +GL P +HY+C+VDLLGR
Sbjct: 640 QHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGR 699
Query: 385 AGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQL 427
G ++ A FI MPI P+ VIW AAE +EP A +V L
Sbjct: 700 TGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVML 759
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N+Y+ + W + A VRK+MK +G+ PGCSW +I + ++ F DK + ++ EI+ L
Sbjct: 760 SNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATL 819
Query: 488 DFLVDQMKTLGYVPE 502
+ L +K GYVP+
Sbjct: 820 EELYTLLKATGYVPD 834
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 119/221 (53%), Gaps = 11/221 (4%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LIT Y + ++ +A ++F++MP RN +SW +IA +AQ + + L L + + S +
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMG--FFSYIQVANSLISMYCKCGNVEEAV 291
P+ + TSI AC+ AL G H +++G F S+ N+LI+MY KC N+E A
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSF--ACNALITMYGKCRNMEYAR 474
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF+ M KDIVSWNS +A Q+ L A + F+ M+ + D +++ +IS+ H
Sbjct: 475 QVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYAHAE 530
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
E F +M + EL + + LLG G L ++
Sbjct: 531 QSNEAMGAFKTMF---CEHELPNSPILTILLGVCGSLGASK 568
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 144/287 (50%), Gaps = 14/287 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+HRE L D S ++A+++ N+ + LA++TGF +V +G++++ +YS+
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 186 IID-AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
++D A K FE M RN +W+ +IAA + ++D + +Y R+ + + T++++
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE--RDPV--KSIACRTALIT 330
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
G + R Q S+ N+LI+ Y + G V EA +F+ M ++ +S
Sbjct: 331 GLAQCGRIDDARILFEQIPEPIVVSW----NALITGYMQNGMVNEAKELFDKMPFRNTIS 386
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W MIAGYAQ+G + A+ L +E+ + + P + + +C + +E G
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV 446
Query: 365 KHGLKPELDHYSC--VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K G + + ++C ++ + G+ +E AR +M + + V W +
Sbjct: 447 KVGC--QFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNS 490
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 119/235 (50%), Gaps = 10/235 (4%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S++T Y ++DA +FE+MP RN+VSWT +I+ + + +++ M L
Sbjct: 162 NSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL 221
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV-EEAVY 292
P+ F S LSA G G L S ++ GF + + +++++Y + +V + A+
Sbjct: 222 PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
F +M ++ +W++MIA + G AI ++E + VK A +I+ G
Sbjct: 282 FFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE---RDPVKSIACR-TALITGLAQCGR 337
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+++ ++ F+ + +P + ++ ++ + G++ EA++ +MP + N + W
Sbjct: 338 IDDARILFEQIP----EPIVVSWNALITGYMQNGMVNEAKELFDKMP-FRNTISW 387
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 21/211 (9%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+A +VF+ MP R++++W ++I+A+ D +LY +++ N T +LS
Sbjct: 52 EAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY----DAISGGNMRTGAILLS--- 104
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVA-NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G G LG R + + G VA N++IS Y + G++ A +F+ M +D+ SWN
Sbjct: 105 GYGRLG--RVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWN 162
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY--FDSMA 364
SM+ GY V A +LFE+M ++ + +++ +IS +G + GK + F M
Sbjct: 163 SMLTGYCHSLQMVDARNLFEKMPERNL----VSWTVMISG--YGRIENHGKAWDIFCKMH 216
Query: 365 KHGLKPELDHYS---CVVDLLGRAGLLEEAR 392
+ GL P+ +++ V LG +LE R
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNLDVLESLR 247
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 45/187 (24%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
N+ G+ L++ Y + +++A +VF+ M RN V+W A+I+ + Q + M L+ M
Sbjct: 94 GNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM 153
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ + NS+++ YC +
Sbjct: 154 PS---------------------------------------RDVSSWNSMLTGYCHSLQM 174
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQ---HGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
+A +F M +++VSW MI+GY + HG +A D+F +M ++ + PD F +
Sbjct: 175 VDARNLFEKMPERNLVSWTVMISGYGRIENHG---KAWDIFCKMHREGLLPDQSNFASAL 231
Query: 345 SSCRHGG 351
S+ + G
Sbjct: 232 SAVKGLG 238
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
+ G V EA VF+ M +DI++WNSMI+ Y +G+ A DL++ + ++ AI
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAI---- 101
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++S G V E + FD M + SC V + G + AR MP
Sbjct: 102 LLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYV----QNGDITMARRLFDAMP 154
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 230/435 (52%), Gaps = 50/435 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + +LHR + S L++ +C + + G LA++ G N + ++L
Sbjct: 401 EEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNAL 460
Query: 177 ITLYSKCR-------------------------------VIIDAYKVFEEMPVRNVVSWT 205
IT+Y KCR ++ +A F+ M R+ VSWT
Sbjct: 461 ITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWT 520
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
II+A+A Q + + ++ M PN T +L C GA G+ H I++
Sbjct: 521 TIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKL 580
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G S + VAN+LISMY KCG ++ +F+ M +DI +WN++I GYAQHGL AI ++
Sbjct: 581 GMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMY 639
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
+ M V P+ +TF+G++++C H GLV+EG +F SM++ +GL P +HY+C+VDLLGR
Sbjct: 640 QHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGR 699
Query: 385 AGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQL 427
G ++ A FI MPI P+ VIW AAE +EP A +V L
Sbjct: 700 TGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVML 759
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N+Y+ + W + A VRK+MK +G+ PGCSW +I + ++ F DK + ++ EI+ L
Sbjct: 760 SNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATL 819
Query: 488 DFLVDQMKTLGYVPE 502
+ L +K GYVP+
Sbjct: 820 EELYTLLKATGYVPD 834
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 119/221 (53%), Gaps = 11/221 (4%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LIT Y + ++ +A ++F++MP RN +SW +IA +AQ + + L L + + S +
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMG--FFSYIQVANSLISMYCKCGNVEEAV 291
P+ + TSI AC+ AL G H +++G F S+ N+LI+MY KC N+E A
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSF--ACNALITMYGKCRNMEYAR 474
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF+ M KDIVSWNS +A Q+ L A + F+ M+ + D +++ +IS+ H
Sbjct: 475 QVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYAHAE 530
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
E F +M + EL + + LLG G L ++
Sbjct: 531 QSNEAMGAFKTMF---CEHELPNSPILTILLGVCGSLGASK 568
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 144/287 (50%), Gaps = 14/287 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+HRE L D S ++A+++ N+ + LA++TGF +V +G++++ +YS+
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274
Query: 186 IID-AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
++D A K FE M RN +W+ +IAA + ++D + +Y R+ + + T++++
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE--RDPV--KSIACRTALIT 330
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
G + R Q S+ N+LI+ Y + G V EA +F+ M ++ +S
Sbjct: 331 GLAQCGRIDDARILFEQIPEPIVVSW----NALITGYMQNGMVNEAKELFDKMPFRNTIS 386
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W MIAGYAQ+G + A+ L +E+ + + P + + +C + +E G
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV 446
Query: 365 KHGLKPELDHYSC--VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K G + + ++C ++ + G+ +E AR +M + + V W +
Sbjct: 447 KVGC--QFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNS 490
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 119/235 (50%), Gaps = 10/235 (4%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S++T Y ++DA +FE+MP RN+VSWT +I+ + + +++ M L
Sbjct: 162 NSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL 221
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV-EEAVY 292
P+ F S LSA G G L S ++ GF + + +++++Y + +V + A+
Sbjct: 222 PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
F +M ++ +W++MIA + G AI ++E + VK A +I+ G
Sbjct: 282 FFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE---RDPVKSIACR-TALITGLAQCGR 337
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+++ ++ F+ + +P + ++ ++ + G++ EA++ +MP + N + W
Sbjct: 338 IDDARILFEQIP----EPIVVSWNALITGYMQNGMVNEAKELFDKMP-FRNTISW 387
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 21/211 (9%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+A +VF+ MP R++++W ++I+A+ D +LY +++ N T +LS
Sbjct: 52 EAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY----DAISGGNMRTGAILLS--- 104
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVA-NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G G LG R + + G VA N++IS Y + G++ A +F+ M +D+ SWN
Sbjct: 105 GYGRLG--RVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWN 162
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY--FDSMA 364
SM+ GY V A +LFE+M ++ + +++ +IS +G + GK + F M
Sbjct: 163 SMLTGYCHSLQMVDARNLFEKMPERNL----VSWTVMISG--YGRIENHGKAWDIFCKMH 216
Query: 365 KHGLKPELDHYS---CVVDLLGRAGLLEEAR 392
+ GL P+ +++ V LG +LE R
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNLDVLESLR 247
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 45/187 (24%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
N+ G+ L++ Y + +++A +VF+ M RN V+W A+I+ + Q + M L+ M
Sbjct: 94 GNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM 153
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ + NS+++ YC +
Sbjct: 154 PS---------------------------------------RDVSSWNSMLTGYCHSLQM 174
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQ---HGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
+A +F M +++VSW MI+GY + HG +A D+F +M ++ + PD F +
Sbjct: 175 VDARNLFEKMPERNLVSWTVMISGYGRIENHG---KAWDIFCKMHREGLLPDQSNFASAL 231
Query: 345 SSCRHGG 351
S+ + G
Sbjct: 232 SAVKGLG 238
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
+ G V EA VF+ M +DI++WNSMI+ Y +G+ A DL++ + ++ AI
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAI---- 101
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++S G V E + FD M + SC V + G + AR MP
Sbjct: 102 LLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYV----QNGDITMARRLFDAMP 154
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 245/448 (54%), Gaps = 34/448 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASF-------------LSTAVTSCGS 147
+ NV D++ + VV +IS + R +D L+T +TSC
Sbjct: 96 ARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSG 155
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
++I G L ++T F ++++VGSSL+ +Y+K I +A +VF+ +P R+VVS TAI
Sbjct: 156 PQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAI 215
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ +AQ+ + L+L+R + + ++ N TFT++++A +G +L G+ H +R
Sbjct: 216 ISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKEL 275
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
++ + NSLI MY KCG + + VF+NM + +VSWN+M+ GY +HGL I LF++
Sbjct: 276 PFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD 335
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAG 386
+ K+ VKPD++T L V+S C HGGLV+EG FD++ K HY C++DLLGR+G
Sbjct: 336 LHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSG 394
Query: 387 LLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLAN 429
LE+A + I+ MP IW + A+ L +EPE A +V L+N
Sbjct: 395 RLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSN 454
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA W +VRKLM +K + PG SWI + V++ F + ++ + +I +
Sbjct: 455 IYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKE 514
Query: 490 LVDQMKTLGYVPEVH--EEKVDDASHKR 515
+ +K G+VP++ VDD +R
Sbjct: 515 IFVDIKAAGFVPDLSCVLHDVDDEQKER 542
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 148/270 (54%), Gaps = 1/270 (0%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
A+T+C R + G I + V++G+ L+T+Y +C + DA V + MP R
Sbjct: 47 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 106
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+VVSWT +I+ ++Q + L+L+ M + PN++T ++L++C+G ++ QG+ H
Sbjct: 107 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 166
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
++ F S++ V +SL+ MY K N++EA VF+ + +D+VS ++I+GYAQ GL
Sbjct: 167 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 226
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A+DLF ++ + ++ + +TF ++++ ++ GK + + L + + ++
Sbjct: 227 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLI 286
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
D+ + G L +R M + + V W A
Sbjct: 287 DMYSKCGKLLYSRRVFDNM-LERSVVSWNA 315
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 85/161 (52%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ + ++AC AL +GR H + I + + + L++MY +CG +++A V + M
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ +VSW +MI+GY+Q V A+DLF +M++ P+ T V++SC + +GK
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ K + + S ++D+ ++ ++EAR +P
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 205
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/408 (35%), Positives = 238/408 (58%), Gaps = 28/408 (6%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
V K++ + ++ E +K + S+ + +C + + G I++ A VG
Sbjct: 338 VQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVG 397
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++L+++Y++ + +A +VF ++ R+++S ++ +D +R+ R M
Sbjct: 398 NALVSMYAESGCMEEARRVFNQLYERSMISCIT----EGRDAPLD-----HRIGRMDM-G 447
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ TF S++SA G L +G+ H T++ GF S V+NSL+SMY +CG +E+A
Sbjct: 448 ISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRS 507
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
FN + ++++SW SMI+G A+HG A RA+ LF +M+ VKP+ +T++ V+S+C H GLV
Sbjct: 508 FNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLV 567
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
EGK YF SM + HGL P ++HY+C+VDLL R+GL++EA +FI +MP+ +A++W+
Sbjct: 568 REGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLG 627
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
AA++ + LEP A +V L+NLYA WD+ AR+R M+D L
Sbjct: 628 ACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKE 687
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
G SW+E+ N + FRA D S+ R +I LD LV ++K +GYVP+
Sbjct: 688 TGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDT 735
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 131/250 (52%), Gaps = 8/250 (3%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
++ VGS+LI + ++ + A KVF+ + + VV WT +I+ + Q + +E++
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
EP+ +T +S++SACT G++ G H +RMGF S V+ L+ MY K N+E
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK-SNIE 305
Query: 289 EAV----YVFNNMHGKDIVSWNSMIAGYAQHGLAV-RAIDLFEEMMKQRVKPDAITFLGV 343
+A+ VF M D++SW ++I+GY Q G+ + + LF EM+ + +KP+ IT+ +
Sbjct: 306 QAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSI 365
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
+ +C + + G+ + K + +V + +G +EEAR Q+ Y
Sbjct: 366 LKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQL--YER 423
Query: 404 AVIWEAAESR 413
++I E R
Sbjct: 424 SMISCITEGR 433
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 18/240 (7%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEM-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
+ V +SL+TLYS+C + A VF+ M +R++VSWTA+ + A+ L L M
Sbjct: 83 DAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEM 142
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI--------RMGFFSY-IQVANSLI 278
S L PN +T ++ AC +C +MG + I V ++LI
Sbjct: 143 LESGLLPNAYTLCAVAHACF-------PHELYCLVGGVVLGLVHKMGLWGTDIAVGSALI 195
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
M + G++ A VF+ + K +V W +I+ Y Q A A+++F + ++ +PD
Sbjct: 196 DMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRY 255
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
T +IS+C G V G + G + +VD+ ++ +E+A D+ ++
Sbjct: 256 TMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSN-IEQAMDYANKV 314
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 250 GALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNS 307
G L GR+ H + +R VANSL+++Y +CG V A VF+ M G +DIVSW +
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC-RHGGLVEEGKVYFDSMAKH 366
M + A++G ++ L EM++ + P+A T V +C H G V + K
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKM 181
Query: 367 GL-KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHV 425
GL ++ S ++D+L R G L AR + I V+W SR ++ ECA V
Sbjct: 182 GLWGTDIAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLISR-YVQGECAEEAV 239
Query: 426 QL 427
++
Sbjct: 240 EI 241
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 227/401 (56%), Gaps = 18/401 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + H + +E D L + SCG+ + + G A G +++ +++I +
Sbjct: 127 IQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINM 186
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC I +A+ VF MP +NV+SW+ +IAAF Q D L +++M+ +E + T+
Sbjct: 187 YGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITY 246
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+L A T GAL G++ H + + G + I V N+L++MY KCG+ ++A VF++M
Sbjct: 247 VSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVE 306
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K++VSWN+M+A Y Q+G + A+ LF+ M + V+P+ ITF+ ++ C H G ++ +
Sbjct: 307 KNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSH 366
Query: 360 FDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
F M + G+ P H+ C++D+LGR+G LEEA + I+ MP+ +AV+W +
Sbjct: 367 FVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHK 426
Query: 410 --------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AE EP CAA ++ L+NLYA ++ WD+AA+VRK M+ G++ G SWI
Sbjct: 427 DEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWI 486
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
EI V+ F A D + S I L L+ +M+ GY P+
Sbjct: 487 EIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPD 527
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 132/247 (53%), Gaps = 6/247 (2%)
Query: 163 RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
R F++N+ L+ +Y KC +++A +VF+ M +NV SWT ++A F Q + ++
Sbjct: 74 RPRFLSNL-----LVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQ 128
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
L+ M P+ + +C + AL QGR H G S + AN++I+MY
Sbjct: 129 LFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYG 188
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG++ EA VF M K+++SW++MIA + Q+ LA A+ F+ M ++ ++ D IT++
Sbjct: 189 KCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVS 248
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
V+ + G +E GK + GL + + +V++ G+ G ++ARD M +
Sbjct: 249 VLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSM-VEK 307
Query: 403 NAVIWEA 409
N V W A
Sbjct: 308 NVVSWNA 314
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ-VAN 275
VD E ++ S ++ C G+ AL +GR H + + G + ++N
Sbjct: 22 VDAIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIH-RWMDSGTLDRPRFLSN 80
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
L+ MY KCG++ EA VF+ M K++ SW ++AG+ Q G V AI LF M ++ P
Sbjct: 81 LLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELP 140
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
D + L I SC + +G+ + A G+ +L + ++++ G+ G + EA
Sbjct: 141 DRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVF 200
Query: 396 KQMPIYPNAVIW 407
+MP N + W
Sbjct: 201 TRMP-EKNVISW 211
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 225/398 (56%), Gaps = 20/398 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R+ + D L + + +CG ++ G + + G N Y+GS+LI++Y+KC +
Sbjct: 217 RDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELE 276
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A ++F+ M R+V++W A+I+ +AQ D + L+ M+ + N T T++LSAC
Sbjct: 277 SARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACA 336
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
GAL G+ + GF I VA +LI MY K G+++ A VF +M K+ SWN+
Sbjct: 337 TIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNA 396
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
MI+ A HG A A+ LF+ M + +P+ ITF+G++S+C H GLV+EG FD M+
Sbjct: 397 MISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMST 456
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES------------ 412
GL P+++HYSC+VDLL RAG L EA D I++MP P+ V A
Sbjct: 457 LFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGE 516
Query: 413 ---RLLLE--PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
R++LE P + ++ + +YA + W+ +AR+R LM+ KG+ PGCSWIE+ N +
Sbjct: 517 RVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHL 576
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
+ F A D ++ ++D L +++K GYVP+V E
Sbjct: 577 HEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVPKVVE 614
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 184/367 (50%), Gaps = 15/367 (4%)
Query: 62 STKT--EVHLRLI-QDFLQTDSKHLDSQKFN-HDFTGTNSTFG---------SSNVFDQL 108
STKT +VH +++ + T + HL S+ + +F ++ F + N+ +
Sbjct: 36 STKTLQQVHTQMVVNSSIHTPNNHLLSKAIHLKNFPYSSLLFSHIAPHPNDYAFNIMIRA 95
Query: 109 LDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA 168
L T + +S+ H + L D SC + ++ L + +
Sbjct: 96 LTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHS 155
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM- 227
+ + SLIT Y++C ++ A KVF+E+P R+ VSW ++IA +A+ +E++R M
Sbjct: 156 DPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMG 215
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
R EP++ + S+L AC G L GR + G + ++LISMY KCG +
Sbjct: 216 RRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGEL 275
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
E A +F+ M +D+++WN++I+GYAQ+G+A AI LF M + V + IT V+S+C
Sbjct: 276 ESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSAC 335
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G ++ GK + ++ G + ++ + ++D+ ++G L+ A+ K MP N W
Sbjct: 336 ATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMP-QKNEASW 394
Query: 408 EAAESRL 414
A S L
Sbjct: 395 NAMISAL 401
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 229/397 (57%), Gaps = 18/397 (4%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+++ R +K D + + +C + R++ G I++G ++ +V S+++ +Y KC
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKC 500
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+I +A K+ + + + VVSW AI++ F+ + + + + M + L+P+ FTF ++L
Sbjct: 501 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
C + G+ H Q I+ ++++L+ MY KCG++ +++ VF + +D V
Sbjct: 561 DTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV 620
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SWN+MI GYA HGL V A+ +FE M K+ V P+ TF+ V+ +C H GL ++G YF M
Sbjct: 621 SWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 680
Query: 364 AKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-------------- 408
H L+P+L+H++C+VD+LGR+ +EA FI MP +AVIW+
Sbjct: 681 TTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEI 740
Query: 409 ---AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
AA + LLL+P+ ++ ++ L+N+YA W +R R+L+K LK PGCSWIE+ +
Sbjct: 741 AELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQS 800
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ F DK++ R E+ +L+ L+ +MK GY P+
Sbjct: 801 EMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPD 837
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 151/278 (54%), Gaps = 11/278 (3%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R ++ D LS ++C T+ G CLAI++GF ++ V ++++ LY KC+ ++
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 403
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD-MCLELYRMMRNSMLEPNDFTFTSILSAC 246
+AY +F+ M ++ VSW AIIAA Q D L M+R M +P+DFT+ S+L AC
Sbjct: 404 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM-KPDDFTYGSVLKAC 462
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+L G H + I+ G S VA++++ MYCKCG ++EA + + + G+ +VSWN
Sbjct: 463 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 522
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++++G++ + + A F EM+ +KPD TF V+ +C + +E GK + K
Sbjct: 523 AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQ 582
Query: 367 GLKPELDHYSCVVDLLGRAGLLE---------EARDFI 395
+ + S +VD+ + G + E RDF+
Sbjct: 583 EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV 620
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 146/325 (44%), Gaps = 26/325 (8%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
+FD + D VV L+S + ++ R + D + + + SC +
Sbjct: 105 LFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEE 164
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G LA++TG +V GS+L+ +Y KCR + DA F MP RN VSW A IA
Sbjct: 165 LSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAG 224
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
Q Q LEL+ M+ L + ++ S +C L GR H I+ F S
Sbjct: 225 CVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSD 284
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V +++ +Y K ++ +A F + + + N+M+ G + GL + A+ LF+ M++
Sbjct: 285 RVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR 344
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH--GLKPELDHYSC----VVDLLGR 384
++ D ++ GV S+C E K YF H +K D C V+DL G+
Sbjct: 345 SSIRFDVVSLSGVFSAC------AETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGK 398
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
L EA + M ++V W A
Sbjct: 399 CKALMEAYLIFQGMK-QKDSVSWNA 422
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R L V ++A SC + + G AI+ F ++ VG++++ +Y+K
Sbjct: 240 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKAN 299
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA + F +P V + A++ + + L++ M S + + + + + S
Sbjct: 300 SLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFS 359
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC + QG+ HC I+ GF I V N+++ +Y KC + EA +F M KD VS
Sbjct: 360 ACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVS 419
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN++IA Q+G I F EM++ +KPD T+ V+ +C +E G + D +
Sbjct: 420 WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVI 479
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEAR 392
K GL + S VVD+ + G+++EA+
Sbjct: 480 KSGLGSDAFVASTVVDMYCKCGIIDEAQ 507
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++++T YS I A +F+ MP +VVSW A+++ + Q ++L+ M +
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ TF +L +C+ L G H ++ G ++ ++L+ MY KC ++++A+
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M ++ VSW + IAG Q+ VR ++LF EM + + ++ SC +
Sbjct: 207 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 266
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G+ K+ + + +VD+ +A L +AR +P
Sbjct: 267 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 34/210 (16%)
Query: 234 PNDFTFTSILSACTGSG--ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
P TF+ + +C +G AL GR+AH + + GF V+N L+ MY +C A
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72
Query: 292 YVFNNMHGKDIVSWNSM-------------------------------IAGYAQHGLAVR 320
VF+ M +D VSWN+M ++GY Q G+
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
++DLF EM ++ V PD TF ++ SC + G K GL+ ++ S +VD
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEAA 410
+ G+ L++A F MP N V W AA
Sbjct: 193 MYGKCRSLDDALCFFYGMP-ERNWVSWGAA 221
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 229/397 (57%), Gaps = 18/397 (4%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+++ R +K D + + +C + R++ G I++G ++ +V S+++ +Y KC
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKC 500
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+I +A K+ + + + VVSW AI++ F+ + + + + M + L+P+ FTF ++L
Sbjct: 501 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
C + G+ H Q I+ ++++L+ MY KCG++ +++ VF + +D V
Sbjct: 561 DTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV 620
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SWN+MI GYA HGL V A+ +FE M K+ V P+ TF+ V+ +C H GL ++G YF M
Sbjct: 621 SWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 680
Query: 364 AKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-------------- 408
H L+P+L+H++C+VD+LGR+ +EA FI MP +AVIW+
Sbjct: 681 TTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEI 740
Query: 409 ---AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
AA + LLL+P+ ++ ++ L+N+YA W +R R+L+K LK PGCSWIE+ +
Sbjct: 741 AELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQS 800
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ F DK++ R E+ +L+ L+ +MK GY P+
Sbjct: 801 EMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPD 837
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 151/278 (54%), Gaps = 11/278 (3%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R ++ D LS ++C T+ G CLAI++GF ++ V ++++ LY KC+ ++
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 403
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD-MCLELYRMMRNSMLEPNDFTFTSILSAC 246
+AY +F+ M ++ VSW AIIAA Q D L M+R M +P+DFT+ S+L AC
Sbjct: 404 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM-KPDDFTYGSVLKAC 462
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+L G H + I+ G S VA++++ MYCKCG ++EA + + + G+ +VSWN
Sbjct: 463 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 522
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++++G++ + + A F EM+ +KPD TF V+ +C + +E GK + K
Sbjct: 523 AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQ 582
Query: 367 GLKPELDHYSCVVDLLGRAGLLE---------EARDFI 395
+ + S +VD+ + G + E RDF+
Sbjct: 583 EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV 620
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 146/325 (44%), Gaps = 26/325 (8%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
+FD + D VV L+S + ++ R + D + + + SC +
Sbjct: 105 LFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEE 164
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G LA++TG +V GS+L+ +Y KCR + DA F MP RN VSW A IA
Sbjct: 165 LSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAG 224
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
Q Q LEL+ M+ L + ++ S +C L GR H I+ F S
Sbjct: 225 CVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSD 284
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V +++ +Y K ++ +A F + + + N+M+ G + GL + A+ LF+ M++
Sbjct: 285 RVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR 344
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH--GLKPELDHYSC----VVDLLGR 384
++ D ++ GV S+C E K YF H +K D C V+DL G+
Sbjct: 345 SSIRFDVVSLSGVFSAC------AETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGK 398
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
L EA + M ++V W A
Sbjct: 399 CKALMEAYLIFQGMK-QKDSVSWNA 422
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R L V ++A SC + + G AI+ F ++ VG++++ +Y+K
Sbjct: 240 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKAN 299
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA + F +P V + A++ + + L++ M S + + + + + S
Sbjct: 300 SLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFS 359
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC + QG+ HC I+ GF I V N+++ +Y KC + EA +F M KD VS
Sbjct: 360 ACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVS 419
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN++IA Q+G I F EM++ +KPD T+ V+ +C +E G + D +
Sbjct: 420 WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVI 479
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEAR 392
K GL + S VVD+ + G+++EA+
Sbjct: 480 KSGLGSDAFVASTVVDMYCKCGIIDEAQ 507
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++++T YS I A +F+ MP +VVSW A+++ + Q ++L+ M +
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ TF +L +C+ L G H ++ G ++ ++L+ MY KC ++++A+
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M ++ VSW + IAG Q+ VR ++LF EM + + ++ SC +
Sbjct: 207 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 266
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G+ K+ + + +VD+ +A L +AR +P
Sbjct: 267 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 34/210 (16%)
Query: 234 PNDFTFTSILSACTGSG--ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
P TF+ + +C +G AL GR+AH + + GF V+N L+ MY +C A
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACAR 72
Query: 292 YVFNNMHGKDIVSWNSM-------------------------------IAGYAQHGLAVR 320
VF+ M +D VSWN+M ++GY Q G+
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
++DLF EM ++ V PD TF ++ SC + G K GL+ ++ S +VD
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEAA 410
+ G+ L++A F MP N V W AA
Sbjct: 193 MYGKCRSLDDALCFFYGMP-ERNWVSWGAA 221
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 213/396 (53%), Gaps = 21/396 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+ + +C + G + ++ ++G++L+ LYS I D K F P
Sbjct: 253 FSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP 312
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VVSWT++I Q Q + L L+ + S +P++FT + +LSAC A+ G
Sbjct: 313 KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ 372
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ G ++ + NS I MY KCG+++ A F DIVSW+ MI+ AQHG
Sbjct: 373 IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGC 432
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A A+DLFE M + P+ ITFLGV+ +C HGGLVEEG YF+ M K HG+ P + H +
Sbjct: 433 AKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSA 492
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+VDLLGRAG L EA FI + V+W + AE + LEPE
Sbjct: 493 CIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPE 552
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
AA++V L N+Y A +R LMKD+G+K PG SWIE+ NVV+ F A D+S+
Sbjct: 553 AAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPN 612
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKR 515
I L+ +++++K L Y+ E+ V DAS +
Sbjct: 613 SQVIYVQLEEMLEEIKKLDYID---EKLVSDASEPK 645
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 167/339 (49%), Gaps = 33/339 (9%)
Query: 128 RERLKVDASFLSTAVTSCGS--TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
R L +++ L +A+ +CGS + +I G A++ G +V VG++L+ Y+K
Sbjct: 135 RHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGD 194
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDM----CLELYRMMRNSMLEPNDFTFT 240
+ DA K+F+ MP NVV + A+IA F Q E D + L+ M++ ++P++FTF+
Sbjct: 195 LEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFS 254
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
SIL AC+ A G+ H Q + S + N+L+ +Y G++E+ + F++
Sbjct: 255 SILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKL 314
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D+VSW S+I G+ Q+G + LF E++ KPD T ++S+C + V+ G
Sbjct: 315 DVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSG---- 370
Query: 361 DSMAKHGLKPELDHYSCVVD----LLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ + + +K + +++ + + + + G ++ A K+ P+ V W S
Sbjct: 371 EQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETK-NPDIVSWSVMIS---- 425
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+N G C +A + +LMK G+ N
Sbjct: 426 -----------SNAQHG--CAKEAVDLFELMKGSGIAPN 451
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP RNVVSW ++I+ + Q + L++ R S L + FTF++ LS C + L G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H G + + NSLI MYCKCG ++ A VF + D VSWNS+IAGY +
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSC--RHGGLVEEGKVYFDSMAKHGLKPELD 373
G + L +M++ + ++ + +C +E GK+ K GL ++
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++D + G LE+A K MP PN V++ A
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNA 215
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 7/276 (2%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L++D S A++ CG T ++R G L +G V + +SLI +Y KC I A
Sbjct: 37 LRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWAR 96
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG-- 248
VFE + VSW ++IA + + D L L M L N + S L AC
Sbjct: 97 LVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNF 156
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
S ++ G+ H +++G + V +L+ Y K G++E+A +F M ++V +N+M
Sbjct: 157 SSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAM 216
Query: 309 IAGYAQ-----HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
IAG+ Q A A+ LF EM + +KP TF ++ +C E GK +
Sbjct: 217 IAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQI 276
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K+ L+ + + +V+L +G +E+ P
Sbjct: 277 FKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP 312
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 97/201 (48%), Gaps = 2/201 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E +++ H+L K D +S +++C + ++ G AI+TG + +S
Sbjct: 333 EGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQ 392
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC I A F+E ++VSW+ +I++ AQ ++L+ +M+ S + PN
Sbjct: 393 ICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNH 452
Query: 237 FTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA-VYVF 294
TF +L AC+ G + +G R G ++ + ++ + + G + EA ++
Sbjct: 453 ITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIM 512
Query: 295 NNMHGKDIVSWNSMIAGYAQH 315
++ D V W S+++ H
Sbjct: 513 DSGFEGDPVMWRSLLSACRVH 533
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 240/439 (54%), Gaps = 37/439 (8%)
Query: 104 VFDQLLDTPVVD-------------VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD++ + VV E+ + + ++ R ++ D L + V++C + +
Sbjct: 152 VFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGS 211
Query: 151 IRGGAPYQCLAIRT----GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
I G GF +++ + ++LI LYSKC + A+ +FE + ++VVSW
Sbjct: 212 IELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNT 271
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM- 265
+I + L L++ M S PND T S+L AC GA+ GR H +
Sbjct: 272 LIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKL 331
Query: 266 -GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G + + SLI MY KCG++E A VFN+M + + SWN+MI G+A HG A A DL
Sbjct: 332 KGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDL 391
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLG 383
F M RV+PD ITF+G++S+C H GL++ G+ F SM + + L P+L+HY C++DLLG
Sbjct: 392 FSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLG 451
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW-------------EAAES---RLL-LEPECAATHVQ 426
+GL +EA + I MP+ P+ VIW E AES +L+ +EPE + ++V
Sbjct: 452 HSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVL 511
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
L+N+YA W+ ARVR ++ KG+K PGCS IE+ +VV+ F DK + R EI +
Sbjct: 512 LSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHM 571
Query: 487 LDFLVDQMKTLGYVPEVHE 505
L+ + Q++ G+ P+ E
Sbjct: 572 LEEMDVQLEEAGFAPDTSE 590
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 151/306 (49%), Gaps = 40/306 (13%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK------------------- 182
+ SC ++ G ++ G + YV +SLI++Y++
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130
Query: 183 --CRVIIDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
C +I Y KVF+E+ R+VVSW A+I + + + + LEL++ M +
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM----GFFSYIQVANSLISMYCKCGN 286
+ P++ T S++SAC SG++ GR H GF S +++ N+LI +Y KCG+
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
VE A +F + KD+VSWN++I GY L A+ LF+EM++ P+ +T L V+ +
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310
Query: 347 CRHGGLVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
C H G ++ G+ VY D K G+ E + ++D+ + G +E A M +Y +
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLK-GVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM-LYRS 368
Query: 404 AVIWEA 409
W A
Sbjct: 369 LSSWNA 374
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 35/238 (14%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VFE + N++ W ++ A LE+Y M + PN ++F +L +C
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA--VY-------------- 292
S A +GR H Q +++G V SLISMY + G +E+A V+
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 293 ---------------VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
VF+ + +D+VSWN+MI GY ++G A++LF+EMM+ V+PD
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 338 ITFLGVISSCRHGGLVEEGKVYFD----SMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
T + V+S+C G +E G+ HG L + ++DL + G +E A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETA 254
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 217/406 (53%), Gaps = 18/406 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D K + + ++ R + D + + + +CG ++ G +R G N +V
Sbjct: 497 DPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAV 556
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL++LY C FE M +N V W A+++ ++Q + L L+R M + LEP
Sbjct: 557 SLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEP 616
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++ SIL AC+ ALG G+ HC ++ VA SL+ MY K G + + +F
Sbjct: 617 DEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIF 676
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
N ++GK++ SWN MI G+ HG +A++LFE+M + +PD TFLGV+ +C H GLV
Sbjct: 677 NRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVS 736
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
EG Y M + L+PEL+HY+CV+D+LGRAG L EA +FI +MP P+A IW
Sbjct: 737 EGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSS 796
Query: 408 -----------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
+ AE L LE A +++ L+NLYA WD VR+ MKD L+ +
Sbjct: 797 SITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDV 856
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
GCSWIE+ VY F A + SN EI + + L Q+ +GY P+
Sbjct: 857 GCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPD 902
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 139/266 (52%), Gaps = 26/266 (9%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLKVDASFLSTA------------VTSCGSTR 149
VFD+LL+ + L+S + ++L+ E + +S + +C
Sbjct: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+I G +A++ G I +++VG+++I LY KC + +A ++F++MP +N++SW ++I
Sbjct: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIR 284
Query: 210 AFAQEWQVDMCLELYRMMRNSMLE------PNDFTFTSILSACTGSGALGQGRSAHCQTI 263
F++ LE YR R S+LE P+ T ++L C+G G + G H +
Sbjct: 285 GFSEN---GFWLEAYRAFR-SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAV 340
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
++G + V N+LI MY KCG + EA +F + K +VSWNSMI Y++ G D
Sbjct: 341 KLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFD 400
Query: 324 LFEEMM--KQRVKPDAITFLGVISSC 347
L +M ++ ++ + +T L ++ +C
Sbjct: 401 LLRKMWMEEELMEVNEVTILNLLPAC 426
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 142/265 (53%), Gaps = 4/265 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPY-QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+ + CG +N+ G + L + + F + + + LIT+YS C +++ VF+ +
Sbjct: 110 MGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRL 169
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+N+ W A+++ + + D + + ++ + +P++FTF ++ ACTG + G
Sbjct: 170 LNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG 229
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+S H ++MG + V N++I++Y KCG ++EAV +F+ M ++++SWNS+I G++++
Sbjct: 230 KSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSEN 289
Query: 316 GLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
G + A F +++ + PD T + ++ C G V+ G V K GL EL
Sbjct: 290 GFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELM 349
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++D+ + G L EA +++
Sbjct: 350 VCNALIDMYSKCGCLSEAAILFRKI 374
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 132/238 (55%), Gaps = 2/238 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + T + C N+ G +A++ G + + V ++LI +YSKC + +A +F
Sbjct: 312 DVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILF 371
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR--MMRNSMLEPNDFTFTSILSACTGSGA 251
++ ++VVSW ++I A+++E V +L R M ++E N+ T ++L AC
Sbjct: 372 RKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESE 431
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L R+ H ++R F + N+ I+ Y KCG++ A +VF M+ K + SWN++I G
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGG 491
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+AQ+G ++A+D + EM + + PD + + ++ +C GL++ GK + ++GL+
Sbjct: 492 HAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLE 549
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
++R F + ++ I Y+KC ++ A VF M ++V SW A+I AQ
Sbjct: 442 SLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKA 501
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L+ Y M + P+DF+ S+L AC G L G+ H +R G VA SL+S+
Sbjct: 502 LDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSL 561
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y C F M K+ V WN+M++GY+Q+ L A+ LF +M+ ++PD I
Sbjct: 562 YFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAI 621
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC-VVDLLGRAGLLEEARDFIKQM 398
++ +C + GK K+ L E + +C ++D+ ++G L ++ ++
Sbjct: 622 ASILGACSQLSALGLGKEVHCFALKNSLM-EDNFVACSLMDMYAKSGFLGHSQRIFNRL 679
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKP 335
LI+MY CG E+ VF+ + K++ WN++++GY ++ L AI F E++ +P
Sbjct: 149 LITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQP 208
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
D TF +I +C + GK K GL +L + ++ L G+ G L+EA +
Sbjct: 209 DNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELF 268
Query: 396 KQMP----IYPNAVIWEAAESRLLLE 417
+MP I N++I +E+ LE
Sbjct: 269 DKMPEQNLISWNSLIRGFSENGFWLE 294
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 224/418 (53%), Gaps = 60/418 (14%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
V SC G + G +N V +SL+ +Y KC + DA+KVFEEM R+
Sbjct: 124 VKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDA 183
Query: 202 VSW-------------------------------TAIIAAFAQEWQVDMCLELYRMMRNS 230
VSW TAI++ +A+ LE +R M+
Sbjct: 184 VSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMV 243
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+EP++ + S+L AC GAL G+ H + GF I V N+LI MY KCG+++E
Sbjct: 244 GIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEG 303
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F+ M+ +D++SW++MI G A HG A AI+LF+EM K +++P+ ITF+G++S+C H
Sbjct: 304 RRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHA 363
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE- 408
GL+ EG YF+SM + + ++P ++HY C+V+LLG +G L++A + IK+MP+ P++ IW
Sbjct: 364 GLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGS 423
Query: 409 ----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
A E L LEP +V L+NLYA + WD +R+RKLM+ K +
Sbjct: 424 LLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSM 483
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
K PGCS IE+ N+V F + D S I VL LV +H+ ++DD
Sbjct: 484 KKTPGCSSIEVDNMVQEFASGDDSKPFSKAIYRVLKLLV-----------MHQRRMDD 530
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 36/243 (14%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-----SMLEPNDFTFTSILSAC 246
+F+ + N + A+I A+ + + +Y+ M + + P+ FTF ++ +C
Sbjct: 68 LFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSC 127
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G G+ H + G S V NSL+ MY KC ++++A VF M +D VSWN
Sbjct: 128 AGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWN 187
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQR-------------------------------VKP 335
++I+G+ + G RA +FEEM + ++P
Sbjct: 188 TLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEP 247
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
D I+ + V+ +C G +E GK K G + + ++++ + G ++E R
Sbjct: 248 DEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLF 307
Query: 396 KQM 398
QM
Sbjct: 308 DQM 310
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 213/396 (53%), Gaps = 21/396 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+ + +C + G + ++ ++G++L+ LYS I D K F P
Sbjct: 332 FSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP 391
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VVSWT++I Q Q + L L+ + S +P++FT + +LSAC A+ G
Sbjct: 392 KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ 451
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ G ++ + NS I MY KCG+++ A F DIVSW+ MI+ AQHG
Sbjct: 452 IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGC 511
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A A+DLFE M + P+ ITFLGV+ +C HGGLVEEG YF+ M K HG+ P + H +
Sbjct: 512 AKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSA 571
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+VDLLGRAG L EA FI + V+W + AE + LEPE
Sbjct: 572 CIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPE 631
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
AA++V L N+Y A +R LMKD+G+K PG SWIE+ NVV+ F A D+S+
Sbjct: 632 AAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPN 691
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKR 515
I L+ +++++K L Y + E+ V DAS +
Sbjct: 692 SQVIYVQLEEMLEEIKKLDY---IDEKLVSDASEPK 724
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 128/250 (51%), Gaps = 3/250 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+T F +++ ++L+ +Y KC A K+F+ MP RNVVSW ++I+ + Q +
Sbjct: 46 IKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVM 105
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
L++ R S L + FTF++ LS C + L GR H G + + NSLI MY
Sbjct: 106 NLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMY 165
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
CKCG ++ A VF + D VSWNS+IAGY + G + L +M++ + ++
Sbjct: 166 CKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALG 225
Query: 342 GVISSC--RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ +C +E GK+ K GL ++ + ++D + G LE+A K MP
Sbjct: 226 SALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP 285
Query: 400 IYPNAVIWEA 409
PN V++ A
Sbjct: 286 -DPNVVMYNA 294
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 167/339 (49%), Gaps = 33/339 (9%)
Query: 128 RERLKVDASFLSTAVTSCGS--TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
R L +++ L +A+ +CGS + +I G A++ G +V VG++L+ Y+K
Sbjct: 214 RHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGD 273
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDM----CLELYRMMRNSMLEPNDFTFT 240
+ DA K+F+ MP NVV + A+IA F Q E D + L+ M++ ++P++FTF+
Sbjct: 274 LEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFS 333
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
SIL AC+ A G+ H Q + S + N+L+ +Y G++E+ + F++
Sbjct: 334 SILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKL 393
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D+VSW S+I G+ Q+G + LF E++ KPD T ++S+C + V+ G
Sbjct: 394 DVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSG---- 449
Query: 361 DSMAKHGLKPELDHYSCVVD----LLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ + + +K + +++ + + + + G ++ A K+ P+ V W S
Sbjct: 450 EQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETK-NPDIVSWSVMIS---- 504
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+N G C +A + +LMK G+ N
Sbjct: 505 -----------SNAQHG--CAKEAVDLFELMKGSGIAPN 530
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 146/319 (45%), Gaps = 20/319 (6%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS------MHHD---LHRER----LKVDASFLSTAVTSCGS 147
+ +FD++ VV LIS +H+ L +E L++D S A++ CG
Sbjct: 73 AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
T ++R G L +G V + +SLI +Y KC I A VFE + VSW ++
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG--SGALGQGRSAHCQTIRM 265
IA + + D L L M L N + S L AC S ++ G+ H +++
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ-----HGLAVR 320
G + V +L+ Y K G++E+A +F M ++V +N+MIAG+ Q A
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE 312
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
A+ LF EM + +KP TF ++ +C E GK + K+ L+ + + +V+
Sbjct: 313 AMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVE 372
Query: 381 LLGRAGLLEEARDFIKQMP 399
L +G +E+ P
Sbjct: 373 LYSLSGSIEDGLKCFHSTP 391
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
L + T+T ++ T +G+L G+ AH I+ F + + N+L+ MYCKCG + A
Sbjct: 15 LPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAK 74
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F+ M +++VSWNS+I+GY Q G ++LF+E ++ D TF +S C
Sbjct: 75 KLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTL 134
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ G++ + GL + + ++D+ + G ++ AR
Sbjct: 135 DLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWAR 175
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 97/201 (48%), Gaps = 2/201 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E +++ H+L K D +S +++C + ++ G AI+TG + +S
Sbjct: 412 EGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQ 471
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC I A F+E ++VSW+ +I++ AQ ++L+ +M+ S + PN
Sbjct: 472 ICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNH 531
Query: 237 FTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA-VYVF 294
TF +L AC+ G + +G R G ++ + ++ + + G + EA ++
Sbjct: 532 ITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIM 591
Query: 295 NNMHGKDIVSWNSMIAGYAQH 315
++ D V W S+++ H
Sbjct: 592 DSGFEGDPVMWRSLLSACRVH 612
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 239/430 (55%), Gaps = 31/430 (7%)
Query: 103 NVFDQLLDT------------PVVDVEKLISMHHDLHRERLKVDASF-LSTAVTSCGSTR 149
N+FDQ+ D P ++++ + R SF L+ A+ +C +
Sbjct: 130 NLFDQIPDPTAFCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVP 189
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAII 208
G A+R G + YV + L+ LY+KC + A VF+ M +N+V+W+A++
Sbjct: 190 APGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMV 249
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ +++ V+ L L+R M+ +EP++ T S++SAC +GAL G+ H R G
Sbjct: 250 SGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGIT 309
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
++++ +LI MY KCG +E A VF+ M KD +W++MI G+A HGL A+ LF M
Sbjct: 310 VDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRM 369
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
++ +V+P+ +TF+GV+S+C H GLVE+G+ Y+ M G+KP +++Y C+VDLL R+GLL
Sbjct: 370 LELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSGLL 429
Query: 389 EEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLY 431
++A F+ MP+ PN+VIW E+A RLL LEP +V L+NLY
Sbjct: 430 DDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLY 489
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A WD+ + +R+ MK K + G S IEI ++ F D S+ + EI VL +
Sbjct: 490 ASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMA 549
Query: 492 DQMKTLGYVP 501
D+++ G+ P
Sbjct: 550 DRVRRAGHKP 559
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 229/397 (57%), Gaps = 18/397 (4%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+++ R +K D + + +C + R++ G I++G ++ +V S+++ +Y KC
Sbjct: 483 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKC 542
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+I +A K+ + + + VVSW AI++ F+ + + + + M + L+P+ FTF ++L
Sbjct: 543 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 602
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
C + G+ H Q I+ ++++L+ MY KCG++ +++ VF + +D V
Sbjct: 603 DTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV 662
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SWN+MI GYA HGL V A+ +FE M K+ V P+ TF+ V+ +C H GL ++G YF M
Sbjct: 663 SWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 722
Query: 364 AKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-------------- 408
H L+P+L+H++C+VD+LGR+ +EA FI MP +AVIW+
Sbjct: 723 TTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEI 782
Query: 409 ---AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
AA + LLL+P+ ++ ++ L+N+YA W +R R+L+K LK PGCSWIE+ +
Sbjct: 783 AELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQS 842
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ F DK++ R E+ +L+ L+ +MK GY P+
Sbjct: 843 EMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPD 879
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 151/278 (54%), Gaps = 11/278 (3%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R ++ D LS ++C T+ G CLAI++GF ++ V ++++ LY KC+ ++
Sbjct: 386 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 445
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD-MCLELYRMMRNSMLEPNDFTFTSILSAC 246
+AY +F+ M ++ VSW AIIAA Q D L M+R M +P+DFT+ S+L AC
Sbjct: 446 EAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM-KPDDFTYGSVLKAC 504
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+L G H + I+ G S VA++++ MYCKCG ++EA + + + G+ +VSWN
Sbjct: 505 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 564
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++++G++ + + A F EM+ +KPD TF V+ +C + +E GK + K
Sbjct: 565 AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQ 624
Query: 367 GLKPELDHYSCVVDLLGRAGLLE---------EARDFI 395
+ + S +VD+ + G + E RDF+
Sbjct: 625 EMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV 662
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 146/325 (44%), Gaps = 26/325 (8%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
+FD + D VV L+S + ++ R + D + + + SC +
Sbjct: 147 LFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEE 206
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G LA++TG +V GS+L+ +Y KCR + DA F MP RN VSW A IA
Sbjct: 207 LSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAG 266
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
Q Q LEL+ M+ L + ++ S +C L GR H I+ F S
Sbjct: 267 CVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSD 326
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V +++ +Y K ++ +A F + + + N+M+ G + GL + A+ LF+ M++
Sbjct: 327 RVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIR 386
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH--GLKPELDHYSC----VVDLLGR 384
++ D ++ GV S+C E K YF H +K D C V+DL G+
Sbjct: 387 SSIRFDVVSLSGVFSAC------AETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGK 440
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
L EA + M ++V W A
Sbjct: 441 CKALMEAYLIFQGMK-QKDSVSWNA 464
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R L V ++A SC + + G AI+ F ++ VG++++ +Y+K
Sbjct: 282 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKAN 341
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA + F +P V + A++ + + L++ M S + + + + + S
Sbjct: 342 SLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFS 401
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC + QG+ HC I+ GF I V N+++ +Y KC + EA +F M KD VS
Sbjct: 402 ACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVS 461
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN++IA Q+G I F EM++ +KPD T+ V+ +C +E G + D +
Sbjct: 462 WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVI 521
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEAR 392
K GL + S VVD+ + G+++EA+
Sbjct: 522 KSGLGSDAFVASTVVDMYCKCGIIDEAQ 549
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++++T YS I A +F+ MP +VVSW A+++ + Q ++L+ M +
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 188
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ TF +L +C+ L G H ++ G ++ ++L+ MY KC ++++A+
Sbjct: 189 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 248
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M ++ VSW + IAG Q+ VR ++LF EM + + ++ SC +
Sbjct: 249 FYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 308
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G+ K+ + + +VD+ +A L +AR +P
Sbjct: 309 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 354
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 34/210 (16%)
Query: 234 PNDFTFTSILSACTGSG--ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
P TF+ + +C +G AL GR+AH + + GF V+N L+ MY +C A
Sbjct: 55 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 114
Query: 292 YVFNNMHGKDIVSWNSM-------------------------------IAGYAQHGLAVR 320
VF+ M +D VSWN+M ++GY Q G+
Sbjct: 115 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 174
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
++DLF EM ++ V PD TF ++ SC + G K GL+ ++ S +VD
Sbjct: 175 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 234
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEAA 410
+ G+ L++A F MP N V W AA
Sbjct: 235 MYGKCRSLDDALCFFYGMP-ERNWVSWGAA 263
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 224/385 (58%), Gaps = 18/385 (4%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+ A+ +++A+ C S ++R G L ++G A++ G+SL+++Y+K +I +A +
Sbjct: 304 LSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATML 363
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+E+ +++ +S+ A+++ + Q + + +++ M+ ++P+ T S++ AC+ AL
Sbjct: 364 FDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAAL 423
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
GR +H I G + NSLI MY KCG ++ + VF+ M +DIVSWN+MIAGY
Sbjct: 424 QHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGY 483
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPE 371
HGL A LF M Q +PD +TF+ +I++C H GLV EGK +FD+M K+G+ P
Sbjct: 484 GIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPR 543
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------------AESRLL- 415
++HY C+VDLL R G L+EA FI+ MP+ + +W A SR++
Sbjct: 544 MEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQ 603
Query: 416 -LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
L PE V L+N+++ +D+AA VR + K KG K +PGCSWIEI ++ F D
Sbjct: 604 KLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGD 663
Query: 475 KSNTRLSEILPVLDFLVDQMKTLGY 499
+S+ +I LD ++ +K LGY
Sbjct: 664 QSHPCSPDIYHELDNILIDIKKLGY 688
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 5/264 (1%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C + ++ G A G +++V ++LI LY +C A VF +MP+R+V
Sbjct: 106 LKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDV 165
Query: 202 VSWTAIIAAFAQEWQVDMCL-ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V+W A++A +A + L M L PN T S+L GAL QG S H
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225
Query: 261 QTIRMGF---FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+R + + +L+ MY KC ++ A VF+ M ++ V+W+++I G+
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDR 285
Query: 318 AVRAIDLFEEMMKQRV-KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
A +LF++M+ + + A + + C + G +AK G+ +L +
Sbjct: 286 MTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGN 345
Query: 377 CVVDLLGRAGLLEEARDFIKQMPI 400
++ + +AGL+ EA ++ I
Sbjct: 346 SLLSMYAKAGLINEATMLFDEIAI 369
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF+ +P + ++ A+I A++ ++LYR M + PN +TF +L AC+
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
L GR+ H +G + + V+ +LI +Y +C A VF M +D+V+WN+M
Sbjct: 112 LADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAM 171
Query: 309 IAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVIS-SCRHGGLVEEGKVY 359
+AGYA HG+ AI +M + ++P+A T + ++ +HG L + V+
Sbjct: 172 LAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVH 224
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G + A VF+ + D ++N++I Y+ G AIDL+ M+ RV P+ TF V+
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C + G+ A GL +L + ++DL R A + +MP+ +
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR-DV 165
Query: 405 VIWEA 409
V W A
Sbjct: 166 VAWNA 170
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 221/382 (57%), Gaps = 18/382 (4%)
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
A+ +C ++ G L + ++V V +SLI++YSKC+ + A ++FE + +
Sbjct: 383 ALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKT 442
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
+VSW A+I +AQ +++ ++ + M+ ++P+ FT S++ A L Q + H
Sbjct: 443 LVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHG 502
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
IR + VA +L+ MY KCG V A +F+ M + + +WN+MI GY HGL
Sbjct: 503 LVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKA 562
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVV 379
A++LFE+M K+ +KP+ +TFL V+S+C H GLVEEG YF SM K +GL+P +DHY +V
Sbjct: 563 ALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMV 622
Query: 380 DLLGRAGLLEEARDFIKQMPIYP----------------NAVIWEAAESRLL-LEPECAA 422
DLLGRA L EA DFI++MPI P N + E A +R+ L+P+
Sbjct: 623 DLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGG 682
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
HV LAN+YA WD+ ARVR M+ KG++ PG S +E+ N V+ F + S+ + +
Sbjct: 683 YHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKK 742
Query: 483 ILPVLDFLVDQMKTLGYVPEVH 504
I L+ L +++K GY+P+ +
Sbjct: 743 IYAFLETLGNRIKAAGYMPDTN 764
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 130/213 (61%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
CG ++R G C I GF +NV+ + ++ +Y+KCR++ +AYK+F+ MP R++V W
Sbjct: 185 CGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCW 244
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
II+ +AQ LEL M+ P+ T SIL A G+L GRS H ++R
Sbjct: 245 NTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMR 304
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
GF S++ V+ +L+ MY KCG+V A +F+ M GK +VSWNSMI GY Q+G A+++
Sbjct: 305 AGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEI 364
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
F++MM ++V+ +T +G + +C G VE+G+
Sbjct: 365 FQKMMDEQVEMTNVTVMGALHACADLGDVEQGR 397
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E + D+ + + + + ++R G ++R GF + V V ++L+ +YSKC
Sbjct: 267 MQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGS 326
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A +F+ M + VVSW ++I + Q +E+++ M + +E + T L A
Sbjct: 327 VGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHA 386
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G + QGR H ++ S + V NSLISMY KC V+ A +F N+ K +VSW
Sbjct: 387 CADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSW 446
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI GYAQ+G AID F +M Q +KPD+ T + VI + ++ + K + +
Sbjct: 447 NAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIR 506
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L + + +VD+ + G + AR M
Sbjct: 507 TCLDKNVFVATALVDMYAKCGAVHTARKLFDMM 539
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 130/256 (50%), Gaps = 7/256 (2%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS- 203
C S + + P L I+ G + + L++L+ K + +A +VF+ P+ + +
Sbjct: 87 CTSMKELHQFIP---LIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQ--PIEDKIDE 141
Query: 204 -WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
+ ++ +A+ +D + + MR + P + FT +L C + L +G+ HCQ
Sbjct: 142 LYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQL 201
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
I GF S + +++MY KC VEEA +F+ M +D+V WN++I+GYAQ+G A+
Sbjct: 202 IVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTAL 261
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
+L M ++ +PD+IT + ++ + G + G+ + G + ++ + +VD+
Sbjct: 262 ELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMY 321
Query: 383 GRAGLLEEARDFIKQM 398
+ G + AR +M
Sbjct: 322 SKCGSVGTARLIFDRM 337
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%)
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
I+ G +S L+S++CK G++ EA VF + K +++M+ GYA++ A+
Sbjct: 101 IKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAV 160
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
F M V+P F ++ C + +GK + +G + + VV++
Sbjct: 161 SFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMY 220
Query: 383 GRAGLLEEARDFIKQMP 399
+ L+EEA +MP
Sbjct: 221 AKCRLVEEAYKMFDRMP 237
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 249/453 (54%), Gaps = 38/453 (8%)
Query: 103 NVFDQLLDT------------PVVDVEKLISMHHDLHRERLKVDASF-LSTAVTSCGSTR 149
N+FDQ+ D P ++++ + R SF L+ A+ +C +
Sbjct: 81 NLFDQIPDPTAFCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVP 140
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAII 208
G A+R G + YV + L+ LY+KC + A VF+ M +N+V+W+A++
Sbjct: 141 APGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMV 200
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ +++ V+ L L+R M+ +EP++ T S++SAC +GAL G+ H R G
Sbjct: 201 SGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGIT 260
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
++++ +LI MY KCG +E A VF+ M KD +W++MI G+A HGL A+ LF M
Sbjct: 261 VDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRM 320
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
++ +V+P+ +TF+GV+S+C H GLVE+G+ Y+ M G+KP +++Y C+VDLL R+GLL
Sbjct: 321 LELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSGLL 380
Query: 389 EEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLY 431
++A F+ MP+ PN+VIW E+A RLL LEP +V L+NLY
Sbjct: 381 DDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLY 440
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A WD+ + +R+ MK K + G S IEI ++ F D S+ + EI VL +
Sbjct: 441 ASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMA 500
Query: 492 DQMKTLGYVP-------EVHEEKVDDASHKRTE 517
D+++ G+ P +V EE+ + A + +E
Sbjct: 501 DRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSE 533
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 228/421 (54%), Gaps = 21/421 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + + + E + D +++ +++C + G A RTG + V V +SL
Sbjct: 379 EKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSL 438
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKCR I A +VF +P +NV+SWT+II ++ L ++ M S L+PN
Sbjct: 439 IDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNS 497
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T S+LSAC GAL G+ H +R G + N+L+ MY +CG +E A FN+
Sbjct: 498 VTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS 557
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
KD+ SWN ++ GYAQ G A++LF +M++ V PD ITF ++ +C G+V +G
Sbjct: 558 CE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDG 616
Query: 357 KVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
YF+SM K + P L HY+ VVDLLGRAG LE+A +FIK+MPI P+ IW
Sbjct: 617 LEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACR 676
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AA+ ++ + ++ L NLYA WD+ ARVRK+M++ L +PGC
Sbjct: 677 IYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGC 736
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEP 518
SW+E+ V+ F D + ++ EI VL+ ++M+ G + + + DD + E
Sbjct: 737 SWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATG-LSMSKDSRRDDIDASKAEI 795
Query: 519 F 519
F
Sbjct: 796 F 796
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 162/294 (55%), Gaps = 7/294 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ ++++H + ++ D + +CG ++ G IR GF ++V V ++L
Sbjct: 177 DEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNAL 236
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE---LYRMMRNSMLE 233
IT+Y KC I A VF+ MP R+ +SW A+I+ + + D+CLE L+ MMR ++
Sbjct: 237 ITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEN---DVCLEGLRLFFMMREFFVD 293
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T TS++SAC G GR H I+ GF + + V NSLI M+ G +EA V
Sbjct: 294 PDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMV 353
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M KD+VSW +MI+GY ++GL +A++ + M + V PD IT V+S+C GL+
Sbjct: 354 FSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++G + + + GL + + ++D+ + +++A + ++P N + W
Sbjct: 414 DKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISW 466
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 177/339 (52%), Gaps = 16/339 (4%)
Query: 66 EVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS--MH 123
EVHL +I+ ++D +++ + F + VFD++ + +IS
Sbjct: 216 EVHLHVIRYGFESDVDVVNA--LITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFE 273
Query: 124 HDLHRERLKV-----------DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
+D+ E L++ D +++ +++C + + R G I+TGF+A V V
Sbjct: 274 NDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSV 333
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
+SLI ++S +A VF +M +++VSWTA+I+ + + + +E Y +M + +
Sbjct: 334 NNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGV 393
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
P++ T S+LSAC G G L +G H R G SY+ VANSLI MY KC +++A+
Sbjct: 394 VPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALE 453
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF+ + K+++SW S+I G + + A+ F++M+ +KP+++T + V+S+C G
Sbjct: 454 VFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGA 512
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ GK + GL + + ++D+ R G +E A
Sbjct: 513 LSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 1/295 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+EK + + ++ V+ + C R G+ +T V +G+
Sbjct: 74 DLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGN 133
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L++++ + +++A+ VF +M R++ SW ++ +A+ D L LY M + P
Sbjct: 134 ALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRP 193
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ +TF +L C G L +GR H IR GF S + V N+LI+MY KCG++ A VF
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M +D +SWN+MI+GY ++ + + + LF M + V PD +T VIS+C G
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ + K G E+ + ++ + G +EA +M + + V W A
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKME-FKDLVSWTA 367
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 211/372 (56%), Gaps = 18/372 (4%)
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+R G +RTG ++ V S+L +Y KC I +A +F++M R++V+WTA+I
Sbjct: 219 LRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDR 278
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ Q+ + +L+ + S + PN+FTF+ +L+AC + G+ H R+GF +
Sbjct: 279 YFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPF 338
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
A++L+ MY KCGN+ A VF D+ SW S+IAGYAQ+G AI FE ++K
Sbjct: 339 SFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVK 398
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLE 389
+PD ITF+GV+S+C H GLV++G YF S+ ++GL DHY+C++DLL R+G +
Sbjct: 399 SGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFD 458
Query: 390 EARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYA 432
EA + I +M + P+ +W AAE+ +EPE AT+V LAN+YA
Sbjct: 459 EAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYA 518
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
W + A++RK M D+G+ PG SWI I V+ F D S+ + EI L L
Sbjct: 519 TAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSK 578
Query: 493 QMKTLGYVPEVH 504
+MK G+VP+ +
Sbjct: 579 RMKEEGFVPDTN 590
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 151/308 (49%), Gaps = 33/308 (10%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
K AS ST + SC +R ++ G +GF+ +++ + L+ +Y+KC ++D+ K
Sbjct: 67 KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQK 126
Query: 192 VFEEMPVRNV-------------------------------VSWTAIIAAFAQEWQVDMC 220
+F+EMP R++ SWTA+I+ + + + +
Sbjct: 127 LFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEA 186
Query: 221 LELYRMM-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
LEL+RMM R+ + N FT +S L+A L G+ H +R G S V ++L
Sbjct: 187 LELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSD 246
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY KCG++EEA ++F+ M +DIV+W +MI Y Q G DLF ++++ ++P+ T
Sbjct: 247 MYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFT 306
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
F GV+++C + E GK M + G P S +V + + G + A K+ P
Sbjct: 307 FSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETP 366
Query: 400 IYPNAVIW 407
P+ W
Sbjct: 367 -QPDLFSW 373
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 19/243 (7%)
Query: 103 NVFDQLLDTPVVDVEKLISMHH-------------DLHRERLKVDASFLSTAVTSCGSTR 149
++FD+++D +V +I + DL R ++ + S + +C +
Sbjct: 259 HIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQT 318
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+ G R GF + S+L+ +YSKC ++ A +VF+E P ++ SWT++IA
Sbjct: 319 SEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIA 378
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA-HCQTIRMGFF 268
+AQ Q D + + ++ S +P+ TF +LSAC +G + +G H + G
Sbjct: 379 GYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLT 438
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHG---LAVRAID- 323
+I + + G +EA + + M K D W S++ G HG LA RA +
Sbjct: 439 HTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEA 498
Query: 324 LFE 326
LFE
Sbjct: 499 LFE 501
>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
Length = 703
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 216/386 (55%), Gaps = 19/386 (4%)
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+C + G + ++ GF +V V +S++ Y KCR A VF+ M VRN V
Sbjct: 228 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 287
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SW +++AA+AQ + Y R S EP DF +S L+ C G L GR+ H
Sbjct: 288 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 347
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+R + I VA++L+ MY KCG VE+A +F +++V+WN+MI GYA G A A+
Sbjct: 348 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 407
Query: 323 DLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVD 380
+F++M++ P+ IT + VI+SC GGL ++G F++M + G++P +HY+CVVD
Sbjct: 408 LVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVD 467
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAAT 423
LLGRAG+ E+A + I+ MP+ P+ +W AAE L+P+ +
Sbjct: 468 LLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGN 527
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
HV L+N++A W +A +RK MK+ G+K +PGCSW+ NVV+ FRA+D + +EI
Sbjct: 528 HVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEI 587
Query: 484 LPVLDFLVDQMKTLGYVPEVHEEKVD 509
+L L QM+ GY+P+ D
Sbjct: 588 QALLSKLRKQMQAAGYMPDTQYSLYD 613
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 2/257 (0%)
Query: 154 GAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G LAIR G++ + +V + + +Y K + A +F EMP RNVV+W A++
Sbjct: 137 GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 196
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + +E Y +R + PN + + +AC G+ L G H ++ GF +
Sbjct: 197 LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVS 256
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V NS++ Y KC +A VF+ M ++ VSW SM+A YAQ+G A + +
Sbjct: 257 VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG 316
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+P +++C + G+ + + + S +VD+ G+ G +E+A
Sbjct: 317 EEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAE 376
Query: 393 DFIKQMPIYPNAVIWEA 409
+ P N V W A
Sbjct: 377 QIFYETP-QRNLVTWNA 392
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 4/277 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA-NVYVGSSLITLYSKCRVIIDAYKV 192
D L+ A S ++R+ R G A+R A + ++ + L+ LYSK + A
Sbjct: 14 DPQLLAAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAA 73
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
P VVS+TA I+ AQ + L + M L PNDFTF S A +
Sbjct: 74 LASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPR 133
Query: 253 GQ-GRSAHCQTIRMGFFSYIQ-VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G H IR G+ V+ + + MY K G ++ A ++F M +++V+WN+++
Sbjct: 134 STIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMT 193
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G + I+ + + + P+ ++ ++C + G+ + + K G +
Sbjct: 194 NAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM 253
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ + +VD G+ +AR M + N+V W
Sbjct: 254 DVSVLNSMVDFYGKCRCAGKARAVFDGMGVR-NSVSW 289
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S+A+T+C + G +A+R+ AN++V S+L+ +Y KC + DA ++F E P
Sbjct: 324 VSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETP 383
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
RN+V+W A+I +A L ++ M+R+ PN T +++++C+ G G
Sbjct: 384 QRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGY 443
Query: 257 SAHCQTI--RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYA 313
+T+ R G + ++ + + G E+A V M + +S W +++
Sbjct: 444 ELF-ETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACK 502
Query: 314 QHG 316
HG
Sbjct: 503 MHG 505
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 222/382 (58%), Gaps = 18/382 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM- 196
L+ A+ +C + G A+R G A+ YV + L+ LY+KC + A VF+ M
Sbjct: 129 LAFALKACAAVPAPGEGRQLHAQALRQGLEASAYVQTGLLNLYAKCEQVALARTVFDGMA 188
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P +++V+W+A+I +++ V L L+R M+ +EP++ T ++SAC +GAL G+
Sbjct: 189 PDKSLVAWSAMINGYSRVGMVTEALGLFREMQAVGVEPDEVTMVGVISACAKAGALDLGK 248
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H R G ++++ +LI MY KCG +E A VF+ M KD +W++MI G+A HG
Sbjct: 249 WVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHG 308
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
L A+ LF M++ +V+P+ +TF+GV+S+C H GLV++G+ Y+ M G+KP +++Y
Sbjct: 309 LVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVDDGRRYWSIMQNLGIKPSMENYG 368
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPE 419
C++DLL R+GLL++A F+ MPI PN++IW E+A RLL LEP
Sbjct: 369 CMIDLLCRSGLLDDAYSFVIDMPISPNSIIWRTLLVACKSSNRIDIAESASKRLLELEPH 428
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+V L+NL A WD+ + +RK MKD + GCS IEI ++ F D S+
Sbjct: 429 NPENYVLLSNLCASNSQWDRVSYLRKKMKDSNVTAVAGCSSIEINGYLHEFVVSDDSHPE 488
Query: 480 LSEILPVLDFLVDQMKTLGYVP 501
+ EI VL + D+++ G+ P
Sbjct: 489 IKEIRLVLREIADRVRRAGHKP 510
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Query: 223 LYRMM-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+YR+M R PN FT L AC A G+GR H Q +R G + V L+++Y
Sbjct: 112 VYRLMLRAGSPRPNTFTLAFALKACAAVPAPGEGRQLHAQALRQGLEASAYVQTGLLNLY 171
Query: 282 CKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
KC V A VF+ M K +V+W++MI GY++ G+ A+ LF EM V+PD +T
Sbjct: 172 AKCEQVALARTVFDGMAPDKSLVAWSAMINGYSRVGMVTEALGLFREMQAVGVEPDEVTM 231
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+GVIS+C G ++ GK + + G+ +L+ + ++D+ + GL+E AR M
Sbjct: 232 VGVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAM 289
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + + ++ ++ D + +++C + G R G ++ + ++
Sbjct: 209 VTEALGLFREMQAVGVEPDEVTMVGVISACAKAGALDLGKWVHAYIDRKGITVDLELSTA 268
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y+KC +I A VF+ M ++ +W+A+I FA V+ L L+ M + PN
Sbjct: 269 LIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPN 328
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV-YVF 294
+ TF +LSAC SG + GR +G ++ +I + C+ G +++A +V
Sbjct: 329 NVTFIGVLSACAHSGLVDDGRRYWSIMQNLGIKPSMENYGCMIDLLCRSGLLDDAYSFVI 388
Query: 295 NNMHGKDIVSWNSMI 309
+ + + W +++
Sbjct: 389 DMPISPNSIIWRTLL 403
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 221/390 (56%), Gaps = 26/390 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L V S S +R G +R G+ +V+V ++L+ +Y++ + A VF MP
Sbjct: 182 LKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMP 241
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-----PNDFTFTSILSACTGSGAL 252
+N+VSW+A+IA +A+ LEL+++M MLE PN T S+L AC AL
Sbjct: 242 DKNIVSWSAMIACYAKNEMPMKALELFQIM---MLEACDTVPNPITMVSVLQACASLAAL 298
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
G+ H +R G S + V N+LI+MY +CG + VF+ M +D++SWNS+I+ Y
Sbjct: 299 EHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIY 358
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPE 371
HGL +AI +FE M+ + V P ITF+ V+ +C H GLVEE K+ F+SM K+ + P
Sbjct: 359 GMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPR 418
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL 415
++HY+C+VD+LGRA L+EA + I+ M P +W E A + L
Sbjct: 419 MEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLF 478
Query: 416 -LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
LEP+ A +V L+++YA R W+ RVRK ++ +GL+ P CSWIE+ +Y + +
Sbjct: 479 ELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIE 538
Query: 475 KSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
+ N ++ E+ L L+ ++K GYVP+ +
Sbjct: 539 EYNPQIEELCAFLITLLTEIKNQGYVPQTN 568
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 132/265 (49%), Gaps = 9/265 (3%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC ++ G + +G + Y+ + LI +Y + A KVF+E + +
Sbjct: 81 INSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTI 140
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG----ALGQGRS 257
W AI A A + + L LY M + N FT+T +L AC S L +G+
Sbjct: 141 FVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKE 200
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R G+ ++ V +L+ +Y + G V A VF M K+IVSW++MIA YA++ +
Sbjct: 201 IHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEM 260
Query: 318 AVRAIDLFEEMMKQRVK--PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
++A++LF+ MM + P+ IT + V+ +C +E GK+ + + GL L
Sbjct: 261 PMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVL 320
Query: 376 SCVVDLLGRAGLLEEAR---DFIKQ 397
+ ++ + GR G + + D++K+
Sbjct: 321 NTLITMYGRCGEISTGQRVFDYMKK 345
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P TF ++++C +L G H + + G +A LI+MYC G+V+ A V
Sbjct: 72 PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL- 352
F+ K I WN++ A + L+ +M + + T+ V+ +C L
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191
Query: 353 ---VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +GK + +HG + + + ++D+ R G + A MP N V W A
Sbjct: 192 ICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPD-KNIVSWSA 250
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 230/416 (55%), Gaps = 49/416 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + + + D L+T + C S ++I G I G ++V V ++L
Sbjct: 329 EEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANAL 388
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------N 229
+T+Y+KC + A FE MP+R+++SWTA+I AF+Q V+ E + M N
Sbjct: 389 VTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWN 448
Query: 230 SML------------------------EPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
SML + + TF++ +SAC L G Q ++
Sbjct: 449 SMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKL 508
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
GF S + VANS+++MY +CG +EEA +F+++ K++VSWN+M+AGYAQ+G + I++F
Sbjct: 509 GFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIF 568
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
E+M+ PD I+++ V+S C H G V EG+ YF SM K HG+ P +H+ C+VDLLGR
Sbjct: 569 EKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGR 628
Query: 385 AGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQL 427
AG LE+A++ I QMP PNA IW A ++ L L+ E ++ L
Sbjct: 629 AGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLL 688
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
AN+Y+ VRKLM+DKG++ NPGCSWIE+ N V+ F +D ++ ++ ++
Sbjct: 689 ANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDV 744
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 144/316 (45%), Gaps = 32/316 (10%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ + + ++ ++ +++C S ++ GA +R +VY G LI +Y+KC
Sbjct: 236 EMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCG 295
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ A +VF+ + N VSWT++I AQ + L L+ MR + + FT ++L
Sbjct: 296 RLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLG 355
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC-------------------- 284
C + G H TI G S + VAN+L++MY KC
Sbjct: 356 VCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIIS 415
Query: 285 -----------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
G+VE+A F+ M ++++SWNSM+A Y Q G + ++ +M+++ V
Sbjct: 416 WTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGV 475
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
K D ITF IS+C ++ G K G + + VV + R G +EEA+
Sbjct: 476 KTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQK 535
Query: 394 FIKQMPIYPNAVIWEA 409
+ + N V W A
Sbjct: 536 MFSSI-VMKNLVSWNA 550
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 141/313 (45%), Gaps = 53/313 (16%)
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
++ C S R+I I G +++++ + L+ +YS C +I DAY+VF + N
Sbjct: 10 SMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPN 69
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMR-------NSML--------------------- 232
V SW +I+ FA Q+ +L+ M NSM+
Sbjct: 70 VYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGY 129
Query: 233 -----------EPNDFTF-----TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
E DF TS+L GA+ + C+T F + NS
Sbjct: 130 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCW----NS 185
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
+I Y K G+V++A+ +F M +D VSWN+MI+ +QHG ++ F EM Q +P+
Sbjct: 186 MIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPN 245
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS--CVVDLLGRAGLLEEARDF 394
++T+ V+S+C +E G + + ++P LD Y+ ++D+ + G LE AR
Sbjct: 246 SMTYASVLSACTSIYDLEWGAHLHARIVR--MEPCLDVYAGCGLIDMYAKCGRLESARQV 303
Query: 395 IKQMPIYPNAVIW 407
+ + NAV W
Sbjct: 304 FDGLTEH-NAVSW 315
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 108/232 (46%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+++ +S+I YSK + A ++F +MP R+ VSW +I+ +Q L + M
Sbjct: 179 SLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMW 238
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N PN T+ S+LSACT L G H + +RM + LI MY KCG +E
Sbjct: 239 NQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLE 298
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A VF+ + + VSW S+I G AQ G A+ LF +M + V D T V+ C
Sbjct: 299 SARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCL 358
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ G+ GL + + +V + + G + +A + MPI
Sbjct: 359 SQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPI 410
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F + C ++ R H Q I MG S I + N L++MY CG + +A VF +
Sbjct: 7 FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE---- 354
++ SWN+MI+G+A G A LFE+M ++ D++++ ++S H G +E
Sbjct: 67 FPNVYSWNTMISGFADSGQMREAEKLFEKMPER----DSVSWNSMMSGYFHNGELEATIK 122
Query: 355 -EGKVYFDSMA--KHGLKPELDH------YSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
G + + +A HG + D + V+D+ + G ++ A+ + P P+
Sbjct: 123 ASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTP-NPSLF 181
Query: 406 IWEA 409
W +
Sbjct: 182 CWNS 185
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 234/402 (58%), Gaps = 31/402 (7%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY----KVFEEMPVRN 200
C ++R G ++ GF +V+V ++LI +Y C + D + KVF++ P +
Sbjct: 135 CAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMY--CCLGEDGFEFAEKVFDDSPKMD 192
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V+W+A+IA F + ++L+R M+ + P++ T S+LSAC GAL G+
Sbjct: 193 TVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVES 252
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
+ +++ N+LI M+ KCGNV++A+ +F M + IVSW S+IAG A HG +
Sbjct: 253 YVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLD 312
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVV 379
A+ LF+EM++ + PD + F+GV+S+C H GLV++G+ YF SM ++ + P+++HY C+V
Sbjct: 313 AVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMV 372
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA------AESRLLL-----------EPECAA 422
DLL R G ++EA +F+++MP PN +IW A L L EP +
Sbjct: 373 DLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHES 432
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
+V L+N+YA +R W++ +VR++M +G+K PG + IE+ N +Y F A DKS+ + E
Sbjct: 433 NYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKE 492
Query: 483 ILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRTE 517
I ++D + ++K GYVP ++ EE +DA ++ +E
Sbjct: 493 IYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSE 534
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 2/178 (1%)
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
YR M + PN FTF +L C G G+L G+ H ++ GF + V N+LI MYC
Sbjct: 112 FYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYC 171
Query: 283 KCG--NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
G E A VF++ D V+W++MIAG+ + G + RA+DLF EM V PD IT
Sbjct: 172 CLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITM 231
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ V+S+C G +E GK + K + ++ + ++D+ + G +++A +QM
Sbjct: 232 VSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQM 289
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 226/393 (57%), Gaps = 19/393 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE + +S+ + +C I +I+ +N +VG++L+ +Y+KC
Sbjct: 135 MQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSS 194
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I DA ++FE MP +N V+W++++A + Q + L ++R + + + F +S +SA
Sbjct: 195 IKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSA 254
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN-MHGKDIVS 304
C G L +G+ H + + GF S I V++SLI MY KCG + EA VF + + IV
Sbjct: 255 CAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVL 314
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN+MI+G+A+H A A+ LFE+M ++ PD +T++ V+++C H GL EEG+ YFD M
Sbjct: 315 WNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMV 374
Query: 365 K-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE--------------- 408
+ H L P + HYSC++D+LGRAGL+ +A D I++MP + +W
Sbjct: 375 RQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFA 434
Query: 409 --AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNV 466
AA+ +EP A H+ LAN+YA + WD+ AR RKL+++ ++ G SWIEI N
Sbjct: 435 EIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIEIKNK 494
Query: 467 VYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
++ F ++++ ++ +I LD LV ++K L Y
Sbjct: 495 IHSFTVGERNHPQIDDIYAKLDNLVVELKKLNY 527
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 126/265 (47%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C TR+ GG IR G ++ + LI +YSKC ++ A K F EMPV+++VSW
Sbjct: 53 CAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSW 112
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+I A Q + L+L M+ N+FT +S+L C A+ + H +I+
Sbjct: 113 NTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIK 172
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
S V +L+ +Y KC ++++A +F +M K+ V+W+SM+AGY Q+G A+ +
Sbjct: 173 AAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLI 232
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F D +S+C + EGK K G + S ++D+ +
Sbjct: 233 FRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAK 292
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G + EA + + + V+W A
Sbjct: 293 CGCIREAYLVFQGVLEVRSIVLWNA 317
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+L C + + GR+ H Q IR+G I +N LI+MY KC V+ A FN M K
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+VSWN++I Q+ A+ L +M ++ + T V+ +C + E
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K + + ++ + + +++A + MP NAV W +
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSS 215
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 228/421 (54%), Gaps = 21/421 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + + + E + D +++ +++C + G A RTG + V V +SL
Sbjct: 379 EKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSL 438
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKCR I A +VF +P +NV+SWT+II ++ L ++ M S L+PN
Sbjct: 439 IDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNS 497
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T S+LSAC GAL G+ H +R G + N+L+ MY +CG +E A FN+
Sbjct: 498 VTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS 557
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
KD+ SWN ++ GYAQ G A++LF +M++ V PD ITF ++ +C G+V +G
Sbjct: 558 CE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDG 616
Query: 357 KVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
YF+SM K + P L HY+ VVDLLGRAG LE+A +FIK+MPI P+ IW
Sbjct: 617 LEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACR 676
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AA+ ++ + ++ L NLYA WD+ ARVRK+M++ L +PGC
Sbjct: 677 IYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGC 736
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEP 518
SW+E+ V+ F D + ++ EI VL+ ++M+ G + + + DD + E
Sbjct: 737 SWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATG-LSMSKDSRRDDIDASKAEI 795
Query: 519 F 519
F
Sbjct: 796 F 796
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 162/294 (55%), Gaps = 7/294 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ ++++H + ++ D + +CG ++ G IR GF ++V V ++L
Sbjct: 177 DEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNAL 236
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE---LYRMMRNSMLE 233
IT+Y KC I A VF+ MP R+ +SW A+I+ + + D+CLE L+ MMR ++
Sbjct: 237 ITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEN---DVCLEGLRLFFMMREFFVD 293
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T TS++SAC G GR H I+ GF + + V NSLI M+ G +EA V
Sbjct: 294 PDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMV 353
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M KD+VSW +MI+GY ++GL +A++ + M + V PD IT V+S+C GL+
Sbjct: 354 FSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++G + + + GL + + ++D+ + +++A + ++P N + W
Sbjct: 414 DKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISW 466
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 177/339 (52%), Gaps = 16/339 (4%)
Query: 66 EVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS--MH 123
EVHL +I+ ++D +++ + F + VFD++ + +IS
Sbjct: 216 EVHLHVIRYGFESDVDVVNA--LITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFE 273
Query: 124 HDLHRERLKV-----------DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
+D+ E L++ D +++ +++C + + R G I+TGF+A V V
Sbjct: 274 NDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSV 333
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
+SLI ++S +A VF +M +++VSWTA+I+ + + + +E Y +M + +
Sbjct: 334 NNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGV 393
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
P++ T S+LSAC G G L +G H R G SY+ VANSLI MY KC +++A+
Sbjct: 394 VPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALE 453
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF+ + K+++SW S+I G + + A+ F++M+ +KP+++T + V+S+C G
Sbjct: 454 VFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGA 512
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ GK + GL + + ++D+ R G +E A
Sbjct: 513 LSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 1/295 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+EK + + ++ V+ + C R G+ +T V +G+
Sbjct: 74 DLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGN 133
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L++++ + +++A+ VF +M R++ SW ++ +A+ D L LY M + P
Sbjct: 134 ALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRP 193
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ +TF +L C G L +GR H IR GF S + V N+LI+MY KCG++ A VF
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M +D +SWN+MI+GY ++ + + + LF M + V PD +T VIS+C G
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ + K G E+ + ++ + G +EA +M + + V W A
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKME-FKDLVSWTA 367
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 253/502 (50%), Gaps = 67/502 (13%)
Query: 67 VHLRLIQDFLQTDSKHLDS-QKFNHDFTGTNST---FGSSN-----VFDQLLDTPVVD-- 115
VH L++ L DS L+ +F+ +F TN + F + +F+ ++ V++
Sbjct: 29 VHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDS 88
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
++ I ++H + +E L D+ + +C + + G L ++ G ++ +V +S
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTS 148
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ----VDM------------ 219
L++LY KC I +A+KVF+++P +NV +WTAII+ + + +DM
Sbjct: 149 LVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGML 208
Query: 220 ----------------------CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
L+L+ M N P+ + +L AC GAL G
Sbjct: 209 EKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNW 268
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
A R F + +LI MY KCG ++ A VF M KDIV WN+ I+G A G
Sbjct: 269 ASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGH 328
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A LF +M K ++PD TF+G++ +C H GLV+EG+ YF+SM + L PE++HY
Sbjct: 329 VKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYG 388
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+VDLLGRAG L+EA +K MP+ NA++W A + + LEP
Sbjct: 389 CMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPS 448
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+ +V L+N+Y+ W+ AA++R +M ++G+K PG SWIE+ VV+ F D S+
Sbjct: 449 NSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPL 508
Query: 480 LSEILPVLDFLVDQMKTLGYVP 501
+I L LV +K GYVP
Sbjct: 509 SEKIYAKLGELVKDLKASGYVP 530
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 1/173 (0%)
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G +L + H +R+G + N ++ GN + +F+ +I +N+
Sbjct: 19 GFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNT 78
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI G + +I+++ M K+ + PD+ TF ++ +C + G + K G
Sbjct: 79 MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAG 138
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPEC 420
+ + + +V L G+ G ++ A +P N W A S + +C
Sbjct: 139 CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIISGYIGVGKC 190
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 213/390 (54%), Gaps = 17/390 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + D + + +C S R G +A++ G + YV +LI +Y++C +
Sbjct: 132 EGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRA 191
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F+ M VVS+ A+I A + L L+R M+ L+P T S+LSAC
Sbjct: 192 ARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACAL 251
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
GAL GR H +M S ++V +LI MY KCG++E+A+ VF +M +D +W+ M
Sbjct: 252 LGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVM 311
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ YA HG AI +FEEM KQ +KPD +TFLGV+ +C H G+V EG YFDSM ++G+
Sbjct: 312 MVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGI 371
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA-----------------E 411
+ HY CV DLL R+G LE A FI ++PI P A++W E
Sbjct: 372 VSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFE 431
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
L L+ +V +NL A W++ VRKLM +KG+ PGCS IEI N+V+ F
Sbjct: 432 RILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFF 491
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
A D S+ E ++D +++Q+K +GYVP
Sbjct: 492 AGDGSHPHSQEARRMVDEVIEQLKLVGYVP 521
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 1/174 (0%)
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
RMM + P+ +TF S+L AC + A +GR AH ++ G + VA +LI+MY +C
Sbjct: 128 RMMEEG-VAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAEC 186
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G+V A +F+ M G+ +VS+N+MI + L A+ LF EM + +KP ++T + V+
Sbjct: 187 GDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVL 246
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
S+C G +E G+ D + K L + + ++D+ + G LE+A + M
Sbjct: 247 SACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDM 300
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 214/379 (56%), Gaps = 19/379 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
+E++ +D L A+ + ++ G L + G N Y+GSSLI++Y+KC ++
Sbjct: 189 KEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGAGINCYMGSSLISMYAKCGLVE 248
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
DA KVF M RNVV WT++I+ + Q + + L+R M+ + ++ +D T +++S+C
Sbjct: 249 DARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCA 308
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
GAL GR H G + V NSLI MY KCG++ +A +F + +D+ SW +
Sbjct: 309 QMGALDLGRYVHAYCDVHGLGKELSVKNSLIDMYSKCGDINKAHEIFCGLTKRDVFSWTA 368
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK- 365
MI G+ +GL A+DLF +M + +V P+ +TFLGV++SC HGGLVE+G YF M+
Sbjct: 369 MIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMSMV 428
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------------- 409
+ L P ++HY C+VDLLGRA LL EA FIK MPI P+ V+W +
Sbjct: 429 YKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKNMPIAPDVVVWRSLLFACRACGEVGLAEF 488
Query: 410 -AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AE L LEP+ A HV L+N+YA W +R M + + PGCS+IE+ V+
Sbjct: 489 VAERILELEPKKCAGHVLLSNVYATTSRWVDVNELRTSMDNSRMSKQPGCSFIEVDGCVH 548
Query: 469 RFRAEDKSNTRLSEILPVL 487
F A D+S+ I +L
Sbjct: 549 EFFAGDESHLETEAIYNIL 567
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 135/270 (50%), Gaps = 2/270 (0%)
Query: 127 HRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI 186
H + +D L+ A ++ ++ GA L+++ G +++ +V +SLI +YS C
Sbjct: 85 HSGYVTLDNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYP 144
Query: 187 IDAYKVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
A +V + P + VSW II+ + + + L+ + M + +D T + L
Sbjct: 145 ATARQVLDSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALV 204
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
A +G + GR H + G + +SLISMY KCG VE+A VF+ MH +++V
Sbjct: 205 ASAKAGKVKVGRLCHSLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVC 264
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W SMI+GY Q G A++LF +M +K D T V+SSC G ++ G+
Sbjct: 265 WTSMISGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCD 324
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
HGL EL + ++D+ + G + +A +
Sbjct: 325 VHGLGKELSVKNSLIDMYSKCGDINKAHEI 354
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ D+ +KVD ++T V+SC + G G + V +SLI +
Sbjct: 282 VNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSVKNSLIDM 341
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFT 238
YSKC I A+++F + R+V SWTA+I F L+L+ M + PN+ T
Sbjct: 342 YSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVT 401
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGF--FSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F +L++C+ G + QG + Q + M + I+ ++ + + + EA N
Sbjct: 402 FLGVLTSCSHGGLVEQGFH-YFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKN 460
Query: 297 MH-GKDIVSWNSMI 309
M D+V W S++
Sbjct: 461 MPIAPDVVVWRSLL 474
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 220/387 (56%), Gaps = 18/387 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + +C + + G CL+++ G NVYV +LI +Y++C + A VF
Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF 187
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ + VV + A+I +A+ + + L L+R M+ L+PN+ T S+LS+C G+L
Sbjct: 188 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD 247
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ H + F Y++V +LI M+ KCG++++AV +F M KD +W++MI YA
Sbjct: 248 LGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYA 307
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPEL 372
HG A +++ +FE M + V+PD ITFLG++++C H G VEEG+ YF M +K G+ P +
Sbjct: 308 NHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSI 367
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL- 415
HY +VDLL RAG LE+A +FI ++PI P ++W E R+
Sbjct: 368 KHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L+ +V L+NLYA + W+ +RK+MKD+ PGCS IE+ NVV+ F + D
Sbjct: 428 LDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDG 487
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ +++ LD +V ++K GYVP+
Sbjct: 488 VKSATTKLHRALDEMVKELKLSGYVPD 514
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A ++F M DIV +NSM GY++ + LF E+++ + PD TF ++ +C
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 350 GGLVEEGK 357
+EEG+
Sbjct: 142 AKALEEGR 149
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 223/386 (57%), Gaps = 25/386 (6%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
A+ L +SCG + R + GF +V + ++++ Y K + A KVF
Sbjct: 160 ATSLIQMYSSCGFVSDARKLFDF------VGF-KDVALWNAMVAGYVKVGELKSARKVFN 212
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
EMP RNV+SWT +IA +AQ + +EL+R M+ +EP++ ++LSAC GAL
Sbjct: 213 EMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALEL 272
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G H + G + + N+LI MY K GN+ A+ VF NM K +++W+++IA A
Sbjct: 273 GEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALAL 332
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELD 373
HGL AID+F M K +V+P+ +TF+ ++S+C H G+V+ G+ YFD M + + ++P+++
Sbjct: 333 HGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIE 392
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------------EAAESRL----LL 416
HY C++DLL RAG L+EA+ + MP NA+IW E A+ L L
Sbjct: 393 HYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKHLAKL 452
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKS 476
EP + +V L+N YA + W+++ VRKLM++ G+K PG S IEI N+VY F A D S
Sbjct: 453 EPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSVIEINNIVYEFLAGDMS 512
Query: 477 NTRLSEILPVLDFLVDQMKTLGYVPE 502
++++ EI VL ++ Q+K G E
Sbjct: 513 DSQVHEIYHVLCKIILQLKMAGSYQE 538
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 31/241 (12%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A+ +F ++ + I A ++ + LY +R L P+ ++ S+L A
Sbjct: 75 AFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVK 134
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY---------------- 292
A+ GR H QT+ + VA SLI MY CG V +A
Sbjct: 135 LSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAM 194
Query: 293 ---------------VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
VFN M ++++SW ++IAGYAQ AI+LF +M + V+PD
Sbjct: 195 VAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDE 254
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
I L V+S+C G +E G+ + + KHGL + Y+ ++D+ ++G + A + +
Sbjct: 255 IAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFEN 314
Query: 398 M 398
M
Sbjct: 315 M 315
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + + E ++ D + +++C + G + G V + ++LI +
Sbjct: 239 IELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDM 298
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K I A +VFE M ++V++W+ +IAA A ++++ M + + PN+ TF
Sbjct: 299 YAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTF 358
Query: 240 TSILSACTGSGALGQGRSAHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYVFNNM- 297
+ILSAC+ G + GR Q M I+ +I + + G ++EA + ++M
Sbjct: 359 VAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMP 418
Query: 298 HGKDIVSWNSMIAGYAQH 315
+ + W S++A H
Sbjct: 419 FEANAMIWGSLLAASNTH 436
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 216/386 (55%), Gaps = 19/386 (4%)
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+C + G + ++ GF +V V +S++ Y KCR A VF+ M VRN V
Sbjct: 228 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 287
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SW +++AA+AQ + Y R S EP DF +S L+ C G L GR+ H
Sbjct: 288 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 347
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+R + I VA++L+ MY KCG VE+A +F +++V+WN+MI GYA G A A+
Sbjct: 348 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 407
Query: 323 DLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVD 380
+F++M++ P+ IT + VI+SC GGL ++G F++M + G++P +HY+CVVD
Sbjct: 408 LVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVD 467
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAAT 423
LLGRAG+ E+A + I+ MP+ P+ +W AAE L+P+ +
Sbjct: 468 LLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGN 527
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
HV L+N++A W +A +RK MK+ G+K +PGCSW+ NVV+ FRA+D + +EI
Sbjct: 528 HVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEI 587
Query: 484 LPVLDFLVDQMKTLGYVPEVHEEKVD 509
+L L QM+ GY+P+ D
Sbjct: 588 QALLSKLRKQMQAAGYMPDTQYSLYD 613
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 2/257 (0%)
Query: 154 GAPYQCLAIRTGFIA-NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G LAIR G++ + +V + + +Y K + A +F EMP RNVV+W A++
Sbjct: 137 GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 196
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + +E Y +R + PN + + +AC G+ L G H ++ GF +
Sbjct: 197 LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVS 256
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V NS++ Y KC +A VF+ M ++ VSW SM+A YAQ+G A + +
Sbjct: 257 VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG 316
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+P +++C + G+ + + + S +VD+ G+ G +E+A
Sbjct: 317 EEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAE 376
Query: 393 DFIKQMPIYPNAVIWEA 409
+ P N V W A
Sbjct: 377 QIFYETP-QRNLVTWNA 392
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 4/277 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA-NVYVGSSLITLYSKCRVIIDAYKV 192
D L+ A S ++R+ R G A+R A + ++ + L+ LYSK + A
Sbjct: 14 DPQLLAAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAA 73
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
P VVS+TA I+ AQ + L + M L PNDFTF S A +
Sbjct: 74 LASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPR 133
Query: 253 GQ-GRSAHCQTIRMGFFSYIQ-VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G H IR G+ V+ + + MY K G ++ A ++F M +++V+WN+++
Sbjct: 134 STIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMT 193
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G + I+ + + + P+ ++ ++C + G+ + + K G +
Sbjct: 194 NAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM 253
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ + +VD G+ +AR M + N+V W
Sbjct: 254 DVSVLNSMVDFYGKCRCAGKARAVFDGMGVR-NSVSW 289
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S+A+T+C + G +A+R+ AN++V S+L+ +Y KC + DA ++F E P
Sbjct: 324 VSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETP 383
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
RN+V+W A+I +A L ++ M+R+ PN T +++++C+ G G
Sbjct: 384 QRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGY 443
Query: 257 SAHCQTI--RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYA 313
+T+ R G + ++ + + G E+A V M + +S W +++
Sbjct: 444 ELF-ETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACK 502
Query: 314 QHG 316
HG
Sbjct: 503 MHG 505
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 239/434 (55%), Gaps = 54/434 (12%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK------CR 184
++ D +++ +++C + R ++ G +RTG + + ++LI+ Y+K R
Sbjct: 292 MEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETAR 351
Query: 185 VIID---------------------------AYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
I+D A +VF+ M R+V++WTA+I + Q Q
Sbjct: 352 RIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQN 411
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
D +EL+R M S EPN T ++LSAC LG G+ HC+ IR + V+N++
Sbjct: 412 DEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAI 471
Query: 278 ISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
I++Y + G+V A VF+ + K+ V+W SMI AQHGL +AI LFEEM++ VKPD
Sbjct: 472 ITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPD 531
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
+T++GV S+C H G +++GK Y++ M +HG+ PE+ HY+C+VDLL RAGLL EA +FI
Sbjct: 532 RVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFI 591
Query: 396 KQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWD 438
++MP+ P+ V+W AAE L ++P+ + + LAN+Y+ W+
Sbjct: 592 QRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWN 651
Query: 439 QAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
AAR+ KL KDK +K G SW + + V+ F A+D + + I + +++K G
Sbjct: 652 DAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAG 711
Query: 499 YVPEVHE--EKVDD 510
+VP+++ VDD
Sbjct: 712 FVPDLNSVLHDVDD 725
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 149/348 (42%), Gaps = 65/348 (18%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC- 183
D+ E L L+ ++SC +T G I+ G + V V +S++ +Y KC
Sbjct: 153 DMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCG 212
Query: 184 -----RVIIDAYKV-------------------------FEEMPVRNVVSWTAIIAAFAQ 213
R + + KV FE M R++VSW AIIA + Q
Sbjct: 213 DAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQ 272
Query: 214 EWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
DM L+ + RM+ S +EP++FT TS+LSAC L G+ H +R G Q
Sbjct: 273 NGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQ 332
Query: 273 VANSLISMYCKCGNVE---------------------------------EAVYVFNNMHG 299
+ N+LIS Y K G+VE +A VF+ M+
Sbjct: 333 IMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNN 392
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+++W +MI GY Q+G A++LF M++ +P++ T V+S+C + GK
Sbjct: 393 RDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQI 452
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + + + ++ + R+G + AR Q+ V W
Sbjct: 453 HCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTW 500
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 128/261 (49%), Gaps = 32/261 (12%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N + +SL+++Y+K + DA VF +MP R+ VSWT ++ + + ++ + M
Sbjct: 96 NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
L P+ F T++LS+C + A G GR H I++G S + VANS++ MY KCG+ E
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAE 215
Query: 289 E-------------------------------AVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
A+ +F NM + IVSWN++IAGY Q+GL
Sbjct: 216 TARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGL 275
Query: 318 AVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
A+ F M+ ++PD T V+S+C + +++ GK + + G+ +
Sbjct: 276 DDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMN 335
Query: 377 CVVDLLGRAGLLEEARDFIKQ 397
++ ++G +E AR + +
Sbjct: 336 ALISTYAKSGSVETARRIMDK 356
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 37/183 (20%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISM---------------------------------- 280
GR+ H ++ G + N+L+S
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 281 ---YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
Y K G + +A VF M +D VSW M+ G + G A+ F +M+ + + P
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
V+SSC G+ + K GL + + V+ + G+ G E AR ++
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 223
Query: 398 MPI 400
M +
Sbjct: 224 MKV 226
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 233/435 (53%), Gaps = 51/435 (11%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA-NVYVGSSLITLYSKC 183
++ + + ++ L +++C +++ GG + I G + N+ + + LI +++ C
Sbjct: 198 EMEKRGVSPNSVTLVLMLSACSKLKDLEGG-KHIYKYINGGIVERNLILENVLIDMFAAC 256
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC----------------------- 220
+ +A VF+ M R+V+SWT+I+ FA Q+D+
Sbjct: 257 GEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYL 316
Query: 221 --------LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
L L+R M+ S ++P++FT SIL+AC GAL G + +
Sbjct: 317 RMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTF 376
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V N+LI MY KCGNV +A VF MH KD +W +MI G A +G A+ +F M++
Sbjct: 377 VGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEAS 436
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ PD IT++GV+ +C H G+VE+G+ +F SM +HG+KP + HY C+VDLLGRAG LEEA
Sbjct: 437 ITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEA 496
Query: 392 RDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGV 434
+ I MP+ PN+++W AA+ L LEPE A +V L N+YA
Sbjct: 497 HEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAAC 556
Query: 435 RCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
+ W+ +VRKLM ++G+K PGCS +E+ VY F A D+S+ + EI L+ ++ +
Sbjct: 557 KRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDL 616
Query: 495 KTLGYVPEVHEEKVD 509
GY P+ E +D
Sbjct: 617 IKAGYSPDTSEVFLD 631
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 143/301 (47%), Gaps = 42/301 (13%)
Query: 146 GSTRN--IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
G TRN ++ G A++ GF +N++V + I ++S CR++ A KVF+ VV+
Sbjct: 116 GFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVT 175
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W +++ + + Q L+ M + PN T +LSAC+ L G+ + + I
Sbjct: 176 WNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIY-KYI 234
Query: 264 RMGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG---LA- 318
G + + N LI M+ CG ++EA VF+NM +D++SW S++ G+A G LA
Sbjct: 235 NGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLAR 294
Query: 319 ---------------------------VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+ A+ LF EM VKPD T + ++++C H G
Sbjct: 295 KYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLG 354
Query: 352 LVEEG---KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
+E G K Y D K+ +K + + ++D+ + G + +A+ K+M + + W
Sbjct: 355 ALELGEWVKTYID---KNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMH-HKDKFTWT 410
Query: 409 A 409
A
Sbjct: 411 A 411
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 108/213 (50%)
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+I A +VF+ +P + W +I +++ + +Y +M S ++P+ FTF +L
Sbjct: 57 MIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKG 116
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
T + AL G+ ++ GF S + V + I M+ C V+ A VF+ ++V+W
Sbjct: 117 FTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTW 176
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N M++GY + ++ LF EM K+ V P+++T + ++S+C +E GK + +
Sbjct: 177 NIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYING 236
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++ L + ++D+ G ++EA+ M
Sbjct: 237 GIVERNLILENVLIDMFAACGEMDEAQSVFDNM 269
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ ++ +K D + + +T+C + G + + + +VG++LI +
Sbjct: 325 LALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDM 384
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + A KVF+EM ++ +WTA+I A + L ++ M + + P++ T+
Sbjct: 385 YFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITY 444
Query: 240 TSILSACTGSGALGQGRSAHCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+L ACT +G + +G+S T++ G + ++ + + G +EEA V NM
Sbjct: 445 IGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMP 504
Query: 299 GK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
K + + W S++ H + + L E KQ
Sbjct: 505 VKPNSIVWGSLLGACRVH----KNVQLAEMAAKQ 534
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 11/178 (6%)
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC--KCGNVEEAVYVFNNMH 298
S+L C ++ Q + H TI+MG S +I+ C + G + A VF+ +
Sbjct: 12 SLLEKCK---SMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ WN+MI GY++ + ++ M+ +KPD TF ++ ++ GKV
Sbjct: 69 QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ KHG L + + L++ AR ++ WE ++L
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARK------VFDMGDAWEVVTWNIML 180
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 213/390 (54%), Gaps = 17/390 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + D + + +C S R G +A++ G + YV +LI +Y++C +
Sbjct: 132 EGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRA 191
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F+ M VVS+ A+I A + L L+R M+ L+P T S+LSAC
Sbjct: 192 ARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACAL 251
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
GAL GR H +M S ++V +LI MY KCG++E+A+ VF +M +D +W+ M
Sbjct: 252 LGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVM 311
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ YA HG AI +FEEM KQ +KPD +TFLGV+ +C H G+V EG YFDSM ++G+
Sbjct: 312 MVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGI 371
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA-----------------E 411
+ HY CV DLL R+G LE A FI ++PI P A++W E
Sbjct: 372 VSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFE 431
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
L L+ +V +NL A W++ VRKLM +KG+ PGCS IEI N+V+ F
Sbjct: 432 RILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFF 491
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
A D S+ E ++D +++Q+K +GYVP
Sbjct: 492 AGDGSHPHSQEARRMVDEVIEQLKLVGYVP 521
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 113/216 (52%), Gaps = 7/216 (3%)
Query: 189 AYKVFEEMPVRNVVSW-TAIIAAFAQEWQVDMCLE-----LYRMMRNSMLEPNDFTFTSI 242
A +VF+ +P V W ++ +A+ C E RMM + P+ +TF S+
Sbjct: 86 ARQVFDRIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEG-VAPDTYTFVSL 144
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
L AC + A +GR AH ++ G + VA +LI+MY +CG+V A +F+ M G+ +
Sbjct: 145 LKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECV 204
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
VS+N+MI + L A+ LF EM + +KP ++T + V+S+C G +E G+ D
Sbjct: 205 VSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDY 264
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ K L + + ++D+ + G LE+A + M
Sbjct: 265 IRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDM 300
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 218/388 (56%), Gaps = 18/388 (4%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D S+ ++C + N+ G +A++ G VY+ +SL +Y KC + D K+
Sbjct: 82 LDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKL 141
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F R+VV+W +I A+ + + MMR P++ +++S+L +C AL
Sbjct: 142 FSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAAL 201
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
QG H Q IR GF ++VA+SLI+MY KCG++ +A +F +++V W ++IA
Sbjct: 202 YQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAAC 261
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPE 371
QHG A ++LFE+M+++ +KPD ITF+ V+S+C H G VEEG YF+SM K HG+ P
Sbjct: 262 QQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPG 321
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRL 414
+HY+C+VDLL RAG L+ A+ FI+ MPI P+A +W E A
Sbjct: 322 HEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLF 381
Query: 415 LLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
LEP+ +V L N+ ++A VR+ M+ G++ PGCSWI+I N Y F D
Sbjct: 382 DLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHD 441
Query: 475 KSNTRLSEILPVLDFLVDQMKTLGYVPE 502
KS+ + EI +L+ L + +K GYV E
Sbjct: 442 KSHEKTKEIYEMLEKLKELVKKKGYVAE 469
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 28/272 (10%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S +++C T G L + GF+A V+V S+L+ +Y+KC ++ A KVFEEMP
Sbjct: 13 FSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMP 72
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ + TA+ ++ +F+S+ SAC +G L G+
Sbjct: 73 TLLLENLTAL---------------------------DEVSFSSVFSACANAGNLEFGKQ 105
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +++G ++ + + NSL MY KCG + +F+N +D+V+WN MI Y +
Sbjct: 106 VHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHN 165
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A + F M ++ PD ++ V+ SC + + +G + + + + G L S
Sbjct: 166 YEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASS 225
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + + G L +A ++ N V W A
Sbjct: 226 LITMYAKCGSLVDAFQIFEETED-RNVVCWTA 256
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
MR S + PN +TF+++LSACT + A G H + GF + + V ++L+ MY KC +
Sbjct: 1 MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+ A VF M +++ D ++F V S+
Sbjct: 61 MLMAEKVFEEMPTL---------------------------LLENLTALDEVSFSSVFSA 93
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
C + G +E GK K G+ + + + D+ G+ GL +
Sbjct: 94 CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFND 137
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 217/394 (55%), Gaps = 32/394 (8%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S A+ +C S N+ G L +R F AN+ V +SLI +Y C ++DA ++F+E+P
Sbjct: 180 SIALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPE 239
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
RN+V+W +IA ++Q + M L+L R M L+PN FT TSI SAC G +L G+
Sbjct: 240 RNLVTWNTMIAWYSQCNHL-MALQLLREMN---LQPNCFTLTSITSACAGLASLRFGQQV 295
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H +R + +Q+ N+L+ MY KCG++ A +FN M KD +SW SMI GY +G A
Sbjct: 296 HGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYA 355
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSC 377
+I LF M+ V PD + FLG+I +C HGGLV+EG +F SM +++ L+P + Y C
Sbjct: 356 NESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGC 415
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPEC 420
V +LL RAG L EA D I +MP P+ +W AA + + P+
Sbjct: 416 VTNLLARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPDR 475
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
A T+V LAN+YA W + A R+L++ G + G SWI++ + +Y F D S+ ++
Sbjct: 476 AKTYVLLANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDKIYSFTTADSSSPQV 535
Query: 481 SEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHK 514
S VL L M E + D+SHK
Sbjct: 536 SLADEVLQILARHM----------HEALADSSHK 559
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 36/329 (10%)
Query: 104 VFDQLLDTPVVDVEKLISMHH---------DLHRERLKVDAS----FLSTAVTSCGSTRN 150
VFD++ D VV ++S + DL R L LS+ +T+C
Sbjct: 25 VFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVLTAC----- 79
Query: 151 IRGGAP--------YQCLAIRTGFIANVYVGSSLITLYSKCRVII---DAYKVFEEMPV- 198
RGGA +A+R G YV ++LI Y+ C + ++ K+F+ +
Sbjct: 80 -RGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRKLFDALGSG 138
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R SWT+++A +++ Q L+L++ M +E + FT + L AC L G+
Sbjct: 139 RTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQQL 198
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H +R F + + VANSLI MYC C N+ +A +F+ + +++V+WN+MIA Y+Q
Sbjct: 199 HVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQCN-H 257
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+ A+ L EM ++P+ T + S+C + G+ + + +L + +
Sbjct: 258 LMALQLLREM---NLQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMCNAL 314
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
VD+ + G + A+ M Y + + W
Sbjct: 315 VDMYSKCGSIANAKKMFNMMD-YKDKLSW 342
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 7/226 (3%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF+EMP R+VV+WTA+++ +A L+L+R M + + PN+FT +S+L+AC G
Sbjct: 22 ARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVLTACRG 81
Query: 249 SGALG--QGRSAHCQTIRMGFFSYIQVANSLISMYCKCG---NVEEAVYVFNNM-HGKDI 302
A G + S H +R G V N+LI Y C VEE+ +F+ + G+
Sbjct: 82 GAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRKLFDALGSGRTA 141
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
SW SM+AGY++ G + LF+ M++ ++ T + +C + G+
Sbjct: 142 ASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQQLHVL 201
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
+ L + ++D+ L +AR ++P N V W
Sbjct: 202 CLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIP-ERNLVTWN 246
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
A +LI C G + A VF+ M +D+V+W +M++GYA +G A+DLF M+ V
Sbjct: 6 ATTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGV 65
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA------GL 387
P+ T V+++CR G +G S+ ++ +DH VV+ L A G+
Sbjct: 66 GPNEFTLSSVLTACRGG--AADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGV 123
Query: 388 -LEEARDFIKQMPIYPNAVIW 407
+EE+R + A W
Sbjct: 124 GVEESRKLFDALGSGRTAASW 144
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 222/398 (55%), Gaps = 18/398 (4%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
R++ D + + + +CG N+ G + G N + +SLI +Y+KC + A
Sbjct: 217 RIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTA 276
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
K+F+EM R+VV+W+A+I+ +AQ + L L+ M+ + PN+ T S+L +C
Sbjct: 277 RKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAML 336
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
GA G+ H + + + LI Y KCG ++ +V VF M K++ +W ++I
Sbjct: 337 GAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALI 396
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GL 368
G A +G A++ F M++ VKP+ +TF+GV+S+C H LV++G+ F+SM + +
Sbjct: 397 QGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDI 456
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------------EAAESRL- 414
+P ++HY C+VD+LGRAG LEEA FI MP PNAV+W E AE L
Sbjct: 457 EPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLE 516
Query: 415 ---LLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
LEP + ++ L+N YA V + A RVR L+K+K +K PGCS IE+ VV+ F
Sbjct: 517 HITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFF 576
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
+ED + EI LD ++ Q+K LGYVP + +++
Sbjct: 577 SEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLE 614
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 148/284 (52%), Gaps = 1/284 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H + ++ D S+ + +C + +R G L +++GF +N +V ++LI +Y+ C
Sbjct: 112 MHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQ 171
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I A VF+ MP R++V+W ++++ + + D ++L+R + +E +D T S+L A
Sbjct: 172 IGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMA 231
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C L G + G + SLI MY KCG V+ A +F+ M +D+V+W
Sbjct: 232 CGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAW 291
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
++MI+GYAQ A++LF EM K V P+ +T + V+ SC G E GK + K
Sbjct: 292 SAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKK 351
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+K + + ++D + G ++ + + K+M + N W A
Sbjct: 352 KKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMS-FKNVFTWTA 394
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F + ++ +I A + D L L++ M ++ + FTF+S+L AC+
Sbjct: 74 ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSR 133
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
AL +G H ++ GF S V N+LI MY CG + A +VF+ M + IV+WNSM
Sbjct: 134 MKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSM 193
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
++GY ++GL + LF ++++ R++ D +T + V+ +C +E G++ + + GL
Sbjct: 194 LSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGL 253
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + ++D+ + G ++ AR +M + V W A
Sbjct: 254 RRNNTLTTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSA 293
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%)
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A+ +FN++ + ++N MI G A A+ LF++M ++ V+ D TF V+ +
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
C + EG+ + K G K + ++ + G + AR MP
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMP 183
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 224/397 (56%), Gaps = 19/397 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCR 184
+ R ++D + + +CG+ + G + L I+ FI +N ++ +SL+ +Y KC
Sbjct: 205 MRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCG 264
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ A K+FEE+ R+VV W+AIIA FA+ + + ++R M + PN TF SI+
Sbjct: 265 FLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVL 324
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC+ G+L QGRS H IR G ++ S I MY KCG + A VF + K++ S
Sbjct: 325 ACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFS 384
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W++MI G+ HGL A++LF EM P+++TF+ V+S+C H G +EEG +F SM+
Sbjct: 385 WSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMS 444
Query: 365 K-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------------- 407
+ +G+ P +HY+C+VDLLGRAG ++EA FI MP P A W
Sbjct: 445 RDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELA 504
Query: 408 -EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNV 466
E A+ L LE + + +V L+N+YA V W+ + R M +KG+ G + IEI
Sbjct: 505 EEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEK 564
Query: 467 VYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+Y F +ED+ + ++I + + L ++M+ LGYVP++
Sbjct: 565 LYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDL 601
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 192/371 (51%), Gaps = 20/371 (5%)
Query: 75 FLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVD--VEKLISMHHDLHRERLK 132
++Q S H+ S+ FNH TF + + ++ +L + + ++ + + +E
Sbjct: 57 YIQLGSLHVASKAFNH------ITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKL 110
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
VD+ L AV +C +G + LAI+ + YV +L+ +Y++ + +A+KV
Sbjct: 111 VDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKV 170
Query: 193 FEEMPVRNVVSWTAIIAA---FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
FEE+P++N V W +I F++E+ V EL+ MR S E + F ++ AC
Sbjct: 171 FEEVPLKNSVIWGVMIKGHLNFSEEFGV---FELFSRMRRSGFELDPFVVEGLIQACGNV 227
Query: 250 GALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A +G++ H I+ F S + SL+ MY KCG ++ A+ +F + +D+V W+++
Sbjct: 228 YAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAI 287
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
IAG+A++G A+ +I +F +M+ V P+++TF ++ +C G +++G+ M ++G+
Sbjct: 288 IAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGV 347
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLA 428
+ ++ +Y+ +D+ + G + A Q+P N W + + CA +
Sbjct: 348 ELDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGFGMHGLCA----EAL 402
Query: 429 NLYAGVRCWDQ 439
NL+ +R +Q
Sbjct: 403 NLFYEMRSVNQ 413
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 6/214 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
ISM + + + ++ ++ V +C S +++ G IR G +V +S I +
Sbjct: 301 ISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDM 360
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I+ AY+VF ++P +NV SW+ +I F L L+ MR+ PN TF
Sbjct: 361 YAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTF 420
Query: 240 TSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
S+LSAC+ SG + +G S R G + ++ + + G ++EA+ NNM
Sbjct: 421 VSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMP 480
Query: 299 GKDIVS-WNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
+ S W +++ H R +L EE+ K+
Sbjct: 481 TEPGASAWGALLGACRIH----RRAELAEEVAKK 510
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 232 LEPNDFTFTS-------ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
+EPN F S +LS + L + Q + + + Y +
Sbjct: 1 MEPNPFPPISSRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQL 60
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G++ A FN++ +++ SWN+++A ++++ + LF+ M+K+ D+ + +
Sbjct: 61 GSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAV 120
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYP 402
+C L + K++ K L+ E D Y ++++ G LEEA +++P+
Sbjct: 121 KACFGLSLFQGAKLFHSLAIK--LRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPL-K 177
Query: 403 NAVIW 407
N+VIW
Sbjct: 178 NSVIW 182
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 213/390 (54%), Gaps = 17/390 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + D + + +C S R G +A++ G + YV +LI +Y++C +
Sbjct: 132 EGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRA 191
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F+ M VVS+ A+I A + L L+R M+ L+P T S+LSAC
Sbjct: 192 ARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACAL 251
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
GAL GR H +M S ++V +LI MY KCG++E+A+ VF +M +D +W+ M
Sbjct: 252 LGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVM 311
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ YA HG AI +FEEM KQ +KPD +TFLGV+ +C H G+V EG YFDSM ++G+
Sbjct: 312 MVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMREYGI 371
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA-----------------E 411
+ HY CV DLL R+G LE A FI ++PI P A++W E
Sbjct: 372 VSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFE 431
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
L L+ +V +NL A W++ VRKLM +KG+ PGCS IEI N+V+ F
Sbjct: 432 RILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFF 491
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
A D S+ E ++D +++Q+K +GYVP
Sbjct: 492 AGDGSHPHSQEARRMVDEVIEQLKLVGYVP 521
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 1/174 (0%)
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
RMM + P+ +TF S+L AC + A +GR AH ++ G + VA +LI+MY +C
Sbjct: 128 RMMEEG-VAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAEC 186
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G+V A +F+ M G+ +VS+N+MI + L A+ LF EM + +KP ++T + V+
Sbjct: 187 GDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVL 246
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
S+C G +E G+ D + K L + + ++D+ + G LE+A + M
Sbjct: 247 SACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDM 300
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 251/486 (51%), Gaps = 35/486 (7%)
Query: 49 LRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQL 108
L VL + R+ + E+H + LQ S L + F +T + S VFD L
Sbjct: 311 LNVLPVCLERSELQSLKELHGYSWRHGLQ--SNELVANAFIAAYTRCGALCSSERVFD-L 367
Query: 109 LDTPVV--------------DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGG 154
+DT V D K + ++ + L D + + + +C +++ G
Sbjct: 368 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 427
Query: 155 APYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE 214
A+R G + ++G SL++LY C A +F+ M R++VSW +IA ++Q
Sbjct: 428 EEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQN 487
Query: 215 WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
D + L+R M + ++P + + AC+ AL G+ HC ++ I V+
Sbjct: 488 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 547
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
+S+I MY K G + + +F+ + KD+ SWN +IAGY HG A++LFE+M++ +K
Sbjct: 548 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 607
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARD 393
PD TF G++ +C H GLVE+G YF+ M H ++P+L+HY+CVVD+LGRAG +++A
Sbjct: 608 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 667
Query: 394 FIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRC 436
I++MP P++ IW E ++LL LEPE +V ++NL+AG
Sbjct: 668 LIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGK 727
Query: 437 WDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKT 496
WD RVR MKD GL+ + GCSWIE+ V+ F D+ L E+ L ++ +
Sbjct: 728 WDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISS 787
Query: 497 LGYVPE 502
+GY P+
Sbjct: 788 IGYTPD 793
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 123/242 (50%), Gaps = 4/242 (1%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
K D L + +C ++ G +A + +++V+VG++LI +Y KC ++ +A K
Sbjct: 98 KPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVK 157
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSMLEPNDFTFTSILSACTGS 249
VFE MP RN+VSW +II F++ + +R M P+ T ++L C G
Sbjct: 158 VFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGE 217
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
+ +G + H +++G + V NSLI MY KC + EA +F+ K+IVSWNSMI
Sbjct: 218 EDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMI 277
Query: 310 AGYAQHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
GYA+ R L ++M + ++K D T L V+ C ++ K +HG
Sbjct: 278 GGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHG 337
Query: 368 LK 369
L+
Sbjct: 338 LQ 339
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 140/259 (54%), Gaps = 4/259 (1%)
Query: 138 LSTAVTSCGSTRNIR-GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+ + +CG ++I G ++ ++ T F + + + +IT+YS C D+ VF+++
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+N+ W AI++A+ + + + ++ ++ + +P++FT ++ AC G LG G
Sbjct: 61 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H +M S + V N+LI+MY KCG VEEAV VF +M +++VSWNS+I G++++
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSEN 180
Query: 316 GLAVRAIDLFEEMM--KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
G + + F EM+ ++ PD T + V+ C +E+G K GL EL
Sbjct: 181 GFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELM 240
Query: 374 HYSCVVDLLGRAGLLEEAR 392
+ ++D+ + L EA+
Sbjct: 241 VNNSLIDMYSKCRFLSEAQ 259
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 116/218 (53%), Gaps = 6/218 (2%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + L T + C +I G LA++ G + V +SLI +YSKCR + +A +F
Sbjct: 203 DVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLF 262
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR----NSMLEPNDFTFTSILSACTGS 249
++ +N+VSW ++I +A+E D+C Y + + ++ ++ ++FT ++L C
Sbjct: 263 DKNDKKNIVSWNSMIGGYARE--EDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLER 320
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
L + H + R G S VAN+ I+ Y +CG + + VF+ M K + SWN+++
Sbjct: 321 SELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALL 380
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
GYAQ+ +A+DL+ +M + PD T ++ +C
Sbjct: 381 CGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS-LISMYCKCGNVEEAVYVFNNMHGK 300
+L AC + GR H F V N+ +I+MY CG+ ++ VF+ + K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVY 359
++ WN++++ Y ++ L A+ +F E++ KPD T VI +C GL++ G
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGL-- 119
Query: 360 FDSMAKHGLKPELDHYS------CVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEA 409
HG+ ++D S ++ + G+ GL+EEA + MP + N++I
Sbjct: 120 --GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGF 177
Query: 410 AESRLLLE 417
+E+ L E
Sbjct: 178 SENGFLQE 185
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 219/365 (60%), Gaps = 19/365 (5%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C +T N++ GA C ++ + ++G+ +IT+YS+ +I +A K F + ++V+SW
Sbjct: 212 CTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISW 271
Query: 205 TAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
+IAA + L +++ M + + P+DFTFTS L+AC G ++ G+ H +
Sbjct: 272 NTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLM 331
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
R + + V N+L++MY KCG + A +F+ M ++VSWN++IAG+ HGL RA++
Sbjct: 332 RTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVE 391
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLL 382
LFE+M ++PD++TF+G++++C H GLV++G++YF+SM + +G+ P+++H+SC++D+L
Sbjct: 392 LFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDML 451
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHV 425
GRAG L EA +++++ P + + V+ + A+ L L+P + +V
Sbjct: 452 GRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYV 511
Query: 426 QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILP 485
L+NLYA WD A RK +K GLK PG S IE+ V +F D ++ R+ EI
Sbjct: 512 LLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKG 571
Query: 486 VLDFL 490
+L L
Sbjct: 572 ILKTL 576
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 164/323 (50%), Gaps = 13/323 (4%)
Query: 96 NSTFGSSNVFDQLLDTPVVDVEKLIS---------MHHDLHRERLKVDASFL-STAVTSC 145
++TF + VFD++ + +V +IS M DL+ + V ++ ++ +++C
Sbjct: 53 HTTF-ARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISAC 111
Query: 146 GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
S + G +++ G+ + +V +SLI++Y KC DA VF P N VS+
Sbjct: 112 ASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYN 171
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
A+I F + Q++ LE +++MR L P+ F F +L CT + L +G HCQT+++
Sbjct: 172 ALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKL 231
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
S + N +I+MY + ++EA F + KD++SWN++IA + + + +F
Sbjct: 232 NLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVF 291
Query: 326 EEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
+ M ++ V+PD TF +++C + GK + + L +L + +V++ +
Sbjct: 292 KHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAK 351
Query: 385 AGLLEEARDFIKQMPIYPNAVIW 407
G + A D +M ++ N V W
Sbjct: 352 CGCIGYAYDIFSKM-VHHNLVSW 373
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 124/210 (59%), Gaps = 3/210 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ + C T+ +R G ++TG ++V++ + ++ +Y+KC A +VF+EM
Sbjct: 6 LSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMF 65
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N+VSW+A+I+ + Q + M ++LY M L PN++ F S++SAC A+ G+
Sbjct: 66 EKNLVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQK 122
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++++ G+ S V+NSLISMY KC +A+ VF N + VS+N++I G+ ++
Sbjct: 123 IHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQ 182
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
R ++ F+ M +Q + PD F+GV+ C
Sbjct: 183 LERGLEFFKLMRQQGLIPDRFAFMGVLGIC 212
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T +S+L C+ + AL G S H ++ G S + ++N +++MY KCG+ A VF+ M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
K++VSW++MI+GY Q G AIDL+ +M + P+ F VIS+C
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISAC 111
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
H ++ D ++A+ +C ++ G +RT ++ VG++L+ +Y+KC
Sbjct: 293 HMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKC 352
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
I AY +F +M N+VSW IIA F + +EL+ M S + P+ TF +L
Sbjct: 353 GCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLL 412
Query: 244 SACTGSGALGQGR-SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+AC +G + +G+ + G I+ + LI M + G + EA
Sbjct: 413 TACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA 460
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 241/455 (52%), Gaps = 80/455 (17%)
Query: 127 HRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK---- 182
H+E + +D+ LS + +CG ++ G ++ G ++++V ++LI +Y+K
Sbjct: 97 HQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDI 156
Query: 183 --CRVIID-------------------------AYKVFEEMPVRNVVSW----------- 204
R I+D A+ +F+ MP R++VSW
Sbjct: 157 EIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLG 216
Query: 205 --------------------TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+++IAA+A+ Q + L L+ M+ + + P+ T S+LS
Sbjct: 217 DVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLS 276
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC GALG G+ H R +++ SL+ MY KCG+++ ++ VFN M+ +D+ +
Sbjct: 277 ACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFA 336
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W++MI G A HG A+D F +M+ + +KP+ +TF+GV+S+C H GLV+EG YF SM+
Sbjct: 337 WSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMS 396
Query: 365 K-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------------- 407
K + + P+++HY CVVD+LGRAG L+EA + IK MP P+A++W
Sbjct: 397 KVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIA 456
Query: 408 -EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNV 466
EA + L LEP +V L+N+Y+ + WD+ VR++MK+ ++ PG S IE+ N
Sbjct: 457 EEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNA 516
Query: 467 VYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
V+ F A D+S+ +IL +L + ++K GY P
Sbjct: 517 VHEFVAGDQSHPESKKILRMLSEITARLKANGYAP 551
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 122/300 (40%), Gaps = 66/300 (22%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIID---AYKVFEEMPVRNVVSWTAIIAAFAQE 214
L I+T N +V + L+ C D A VF+E+P + W +I A+
Sbjct: 23 HALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNS 82
Query: 215 WQVDMCLELYRMMRNSMLEPND-FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ L+ MR+ P D ++ + ++ AC G G+ H Q +++G S + V
Sbjct: 83 QNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFV 142
Query: 274 ANSLISMYCKCGNVEEAVYV-------------------------------FNNMHGKDI 302
+LI MY K G++E A + F+ M +D+
Sbjct: 143 ETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDL 202
Query: 303 VSWN-------------------------------SMIAGYAQHGLAVRAIDLFEEMMKQ 331
VSWN SMIA YA+ + A+ LF EM
Sbjct: 203 VSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLA 262
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
V PD +T + V+S+C G + GK+ + + ++ ++ +L + +VD+ + G ++ +
Sbjct: 263 NVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNS 322
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNI-RGGAPYQCLAIRTGFIANVYVGSSLIT 178
+ + H++ + D + + +++CG + G ++C+ R ++ +G+SL+
Sbjct: 253 LRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIE-RNRIEIDLKLGTSLVD 311
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y+KC I ++ +VF M R+V +W+A+I A ++ L+ + M + ++PND T
Sbjct: 312 MYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVT 371
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYVFNNM 297
F +LSAC+ G + +G + ++ S I+ ++ + + G ++EA+ + +M
Sbjct: 372 FIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSM 431
Query: 298 -HGKDIVSWNSMIAG 311
D + W +++
Sbjct: 432 PFAPDAIVWRALLGA 446
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 228/385 (59%), Gaps = 17/385 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + +C + G +++GF ++ +V ++L+ Y+KC I+ A KVF+E+
Sbjct: 95 MAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEIT 154
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN+V+W+ +I+ +A+ V+ L L+R M+ + + P++ T S++SAC SGAL G+
Sbjct: 155 DRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKW 214
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + + ++++ +L++MY KCG +E A VF+ M KD +W+SMI G A +GL
Sbjct: 215 VHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGL 274
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A A++ F M + +VKP+ +TF+GV+S+C H GLV EG+ Y+ SM + G+ P ++ Y C
Sbjct: 275 AEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGC 334
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPEC 420
+VDLL RA L+E+A ++ MPI PN VIW E RLL LEP
Sbjct: 335 MVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHN 394
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
A ++ L+NLYA + W++ ++VRK MK G+K PGCS IE+ +V+ F D S+
Sbjct: 395 AENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEA 454
Query: 481 SEILPVLDFLVDQMKTLGYVPEVHE 505
E+ +L + ++ +G+ P + +
Sbjct: 455 MEVREILRDISKRVHAVGHQPGISD 479
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 118/214 (55%), Gaps = 2/214 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEW--QVDMCLELYRMMRNSMLEPNDFTFTSILSAC 246
A K+F ++ N+ SW ++I +Q + + +M+R PN FT +L AC
Sbjct: 43 ARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKAC 102
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ AL +G+ H ++ GF S V +L++ Y KC ++ A VF+ + +++V+W+
Sbjct: 103 SIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWS 162
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+MI+GYA+ GL A+ LF +M K V PD +T + VIS+C G ++ GK + K
Sbjct: 163 TMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQ 222
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
++ +L+ + +V++ + G +E A++ MP+
Sbjct: 223 LIETDLELSTALVNMYAKCGCIERAKEVFDAMPV 256
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR-AIDLFEEMMKQRV-KPDAITFLG 342
G+++ A +F+ + +I SWNSMI G +Q + + LF +M+++ P+ T
Sbjct: 38 GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 97
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGL 368
V+ +C +EEG+ ++ K G
Sbjct: 98 VLKACSIVSALEEGQQVHANVLKSGF 123
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 217/403 (53%), Gaps = 32/403 (7%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L R D + +C + G C ++ GF +VYV + LI Y C
Sbjct: 123 LERGESAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGC 182
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A KVF+EMP R++VSW ++I A + + D L+L+R M+ S EP+ +T S+LSA
Sbjct: 183 LDLARKVFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRDMQKS-FEPDGYTMQSVLSA 241
Query: 246 CTGSGALGQGRSAHCQTIR---MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
C G G+L G +H +R + + + NSLI MYCKCG++ A VF M D+
Sbjct: 242 CAGLGSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSLRMAEQVFQGMRKHDL 301
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYF 360
SWN+MI G+A HG A A++ F+ M+K+ VKP+++TF+ ++ +C H G+V +G+ YF
Sbjct: 302 ASWNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIACNHRGMVNKGRQYF 361
Query: 361 DSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------- 409
D M + +G++P L+HY C++DLL RAG + EA D + MP+ P+AVIW +
Sbjct: 362 DMMVREYGIEPALEHYGCIIDLLARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA 421
Query: 410 ---------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
E C+ +V L+ +YA W+ VRKLM D G++
Sbjct: 422 SVELSEEIARNIIGTMEDNQSSNSNCSGAYVLLSRVYASANRWNDVGIVRKLMSDHGIRK 481
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
PGCS IEI + F A D S+ + +I L + D+++++
Sbjct: 482 EPGCSSIEINGISNEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 524
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW-QVDMCLELYR- 225
A +++ ++ L S + A++VF+ + + W +I A A + + + LYR
Sbjct: 62 ATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRK 121
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ P+ TF +L AC L +G+ HCQ ++ GF + V N LI Y CG
Sbjct: 122 MLERGESAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCG 181
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++ A VF+ M + +VSWNSMI + G A+ LF +M K +PD T V+S
Sbjct: 182 CLDLARKVFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRDMQKS-FEPDGYTMQSVLS 240
Query: 346 SCRHGGLVEEG 356
+C G + G
Sbjct: 241 ACAGLGSLSLG 251
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/442 (33%), Positives = 230/442 (52%), Gaps = 49/442 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+ ++ ++ ++ + DA L T +++C N+ G GF ++ +SL
Sbjct: 199 DHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSL 258
Query: 177 ITLYSKCR-------------------------------VIIDAYKVFEEMPVRNVVSWT 205
+ +Y+ C ++ DA +F+ M +++V W+
Sbjct: 259 VNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWS 318
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
A+I+ +A+ +Q L+L+ M+ + P+ T S++SAC GAL Q + H +
Sbjct: 319 AMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKN 378
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
GF + + N+LI MY KCGN+ +A VF NM K+++SW+SMI +A HG A AI LF
Sbjct: 379 GFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALF 438
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGR 384
M +Q ++P+ +TF+GV+ +C H GLVEEG+ +F SM +H + P+ +HY C+VDL R
Sbjct: 439 HRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCR 498
Query: 385 AGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQL 427
A L +A + I+ MP PN +IW E A +RLL LEP+ V L
Sbjct: 499 ANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVL 558
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N+YA + WD VRKLMK KG+ CS IE+ N V+ F D+ + + EI L
Sbjct: 559 SNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKL 618
Query: 488 DFLVDQMKTLGYVPEVHEEKVD 509
D +V Q+K +GY P VD
Sbjct: 619 DAVVSQLKLVGYTPSTSGILVD 640
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 157/325 (48%), Gaps = 33/325 (10%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSS 175
E +S++ L R +D + + + G LA + GF A+ ++ S+
Sbjct: 97 ENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSA 156
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y+ C I+DA +F++M R+VV+W +I ++Q D L+LY M+ S EP+
Sbjct: 157 LIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPD 216
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN--------- 286
++LSAC +G L G++ H GF + SL++MY CG
Sbjct: 217 AIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYD 276
Query: 287 ----------------------VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
V++A ++F+ M KD+V W++MI+GYA+ + A+ L
Sbjct: 277 QLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQL 336
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F EM ++R+ PD IT L VIS+C + G + + K K+G L + ++D+ +
Sbjct: 337 FNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAK 396
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G L +AR+ + MP N + W +
Sbjct: 397 CGNLVKAREVFENMP-RKNVISWSS 420
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 5/214 (2%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F +P ++ F++ + L LY +R + + F+F +L A +
Sbjct: 68 ALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSK 127
Query: 249 SGALGQGRSAHCQTIRMGFF---SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
AL G H + GFF +IQ A LI+MY CG + +A ++F+ M +D+V+W
Sbjct: 128 LSALNLGLEIHGLASKFGFFHADPFIQSA--LIAMYAACGRIMDARFLFDKMSHRDVVTW 185
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N MI GY+Q+ + L+EEM +PDAI V+S+C H G + GK +
Sbjct: 186 NIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKD 245
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+G + + +V++ G + AR+ Q+P
Sbjct: 246 NGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLP 279
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 216/386 (55%), Gaps = 19/386 (4%)
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+C + G + ++ GF +V V +S++ Y KCR A VF+ M VRN V
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SW +++AA+AQ + Y R S EP DF +S L+ C G L GR+ H
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+R + I VA++L+ MY KCG VE+A +F +++V+WN+MI GYA G A A+
Sbjct: 241 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 300
Query: 323 DLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVD 380
+F++M++ P+ IT + VI+SC GGL ++G F++M + G++P +HY+CVVD
Sbjct: 301 LVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVD 360
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAAT 423
LLGRAG+ E+A + I+ MP+ P+ +W AAE L+P+ +
Sbjct: 361 LLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGN 420
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
HV L+N++A W +A +RK MK+ G+K +PGCSW+ NVV+ FRA+D + +EI
Sbjct: 421 HVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEI 480
Query: 484 LPVLDFLVDQMKTLGYVPEVHEEKVD 509
+L L QM+ GY+P+ D
Sbjct: 481 QALLSKLRKQMQAAGYMPDTQYSLYD 506
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 2/257 (0%)
Query: 154 GAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G LAIR G++ + +V + + +Y K + A +F EMP RNVV+W A++
Sbjct: 30 GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 89
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + +E Y +R + PN + + +AC G+ L G H ++ GF +
Sbjct: 90 LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVS 149
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V NS++ Y KC +A VF+ M ++ VSW SM+A YAQ+G A + +
Sbjct: 150 VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG 209
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+P +++C + G+ + + + S +VD+ G+ G +E+A
Sbjct: 210 EEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAE 269
Query: 393 DFIKQMPIYPNAVIWEA 409
+ P N V W A
Sbjct: 270 QIFYETP-QRNLVTWNA 285
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S+A+T+C + G +A+R+ AN++V S+L+ +Y KC + DA ++F E P
Sbjct: 217 VSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETP 276
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
RN+V+W A+I +A L ++ M+R+ PN T +++++C+ G G
Sbjct: 277 QRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGY 336
Query: 257 SAHCQTI--RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYA 313
+T+ R G + ++ + + G E+A V M + +S W +++
Sbjct: 337 ELF-ETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACK 395
Query: 314 QHG 316
HG
Sbjct: 396 MHG 398
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 3/178 (1%)
Query: 232 LEPNDFTFTSILSACTGSGALGQ-GRSAHCQTIRMGFFSYIQ-VANSLISMYCKCGNVEE 289
L PNDFTF S A + G H IR G+ V+ + + MY K G ++
Sbjct: 6 LRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKL 65
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A ++F M +++V+WN+++ G + I+ + + + P+ ++ ++C
Sbjct: 66 ARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAG 125
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ G+ + + K G + ++ + +VD G+ +AR M + N+V W
Sbjct: 126 AMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVR-NSVSW 182
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 233/431 (54%), Gaps = 61/431 (14%)
Query: 129 ERLKVDASFLSTAVTSCGST------RNIRGGAPYQCLAIRTGFI--ANVYVGSSLITLY 180
E++ +D ++ +++C + +++ G Q + ++ F+ A + V ++L+TLY
Sbjct: 292 EKVPLDEFTFTSVLSACANAGFFVHGKSVHG----QIIRLQPNFVPEAALPVNNALVTLY 347
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE--------------------WQV--- 217
SK I+ A ++F+ M +++VVSW I++ + W V
Sbjct: 348 SKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVS 407
Query: 218 --------DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ L+L+ MR ++P D+T+ ++AC GAL GR H ++ GF +
Sbjct: 408 GYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEA 467
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
N+L++MY KCG V +A VF M D VSWN+MI+ QHG A++LF++M+
Sbjct: 468 SNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMV 527
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLL 388
+ + PD I+FL ++++C H GLV+EG YF+SM + G+ P DHY+ ++DLLGR+G +
Sbjct: 528 AEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRI 587
Query: 389 EEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLY 431
EARD IK MP P IWE AA+ + P+ T++ L+N Y
Sbjct: 588 GEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTY 647
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
+ W AARVRKLM+D+G+K PGCSWIE+ + ++ F D + E+ L+ +
Sbjct: 648 SAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIG 707
Query: 492 DQMKTLGYVPE 502
+M+ LGYVP+
Sbjct: 708 ARMRKLGYVPD 718
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 53/326 (16%)
Query: 109 LDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPY----QCLAIRT 164
L P V V H L L+ D + +++ G N+ AP+ C +++
Sbjct: 140 LAAPAVSV-----FHALLGSGSLRPDDYSFTALISAVGQMHNL--AAPHCTQLHCSVLKS 192
Query: 165 GFIANVYVGSSLITLYSKC---RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE------- 214
G A + V ++LI LY KC DA KV +EMP ++ ++WT ++ + +
Sbjct: 193 GAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAAR 252
Query: 215 -------------W--------QVDMC---LELYRMMRNSMLEPNDFTFTSILSACTGSG 250
W Q MC EL+R M + + ++FTFTS+LSAC +G
Sbjct: 253 SVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAG 312
Query: 251 ALGQGRSAHCQTIRM--GFF--SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G+S H Q IR+ F + + V N+L+++Y K G + A +F+ M+ KD+VSWN
Sbjct: 313 FFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWN 372
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++++GY G +A+++F+ M + + ++++ ++S HGGL E+ F+ M
Sbjct: 373 TILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSEDALKLFNQMRAE 428
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEAR 392
+KP Y+ + G G L+ R
Sbjct: 429 DVKPCDYTYAGAIAACGELGALKHGR 454
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNS 230
+SL+ + + DA F+ +P R+ V A+++AFA+ + ++ ++ +
Sbjct: 96 TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSA--HCQTIRMGFFSYIQVANSLISMYCKC---- 284
L P+D++FT+++SA L HC ++ G + + V+N+LI++Y KC
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215
Query: 285 ------------------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+V A VF + GK V WN+MI+GY Q
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
G+ A +LF M+ ++V D TF V+S+C + G GK
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGK 318
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 219/365 (60%), Gaps = 19/365 (5%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C +T N++ GA C ++ + ++G+ +IT+YS+ +I +A K F + ++V+SW
Sbjct: 212 CTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISW 271
Query: 205 TAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
+IAA + L +++ M + + P+DFTFTS L+AC G ++ G+ H +
Sbjct: 272 NTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLM 331
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
R + + V N+L++MY KCG + A +F+ M ++VSWN++IAG+ HGL RA++
Sbjct: 332 RTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVE 391
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLL 382
LFE+M ++PD++TF+G++++C H GLV++G++YF+SM + +G+ P+++H+SC++D+L
Sbjct: 392 LFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDML 451
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHV 425
GRAG L EA +++++ P + + V+ + A+ L L+P + +V
Sbjct: 452 GRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYV 511
Query: 426 QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILP 485
L+NLYA WD A RK +K GLK PG S IE+ V +F D ++ R+ EI
Sbjct: 512 LLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKG 571
Query: 486 VLDFL 490
+L L
Sbjct: 572 ILKTL 576
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 164/323 (50%), Gaps = 13/323 (4%)
Query: 96 NSTFGSSNVFDQLLDTPVVDVEKLIS---------MHHDLHRERLKVDASFL-STAVTSC 145
++TF + VFD++ + +V +IS M DL+ + V ++ ++ +++C
Sbjct: 53 HTTF-ARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISAC 111
Query: 146 GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
S + G +++ G+ + +V +SLI++Y KC DA VF P N VS+
Sbjct: 112 ASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYN 171
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
A+I F + Q++ LE +++MR L P+ F F +L CT + L +G HCQT+++
Sbjct: 172 ALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKL 231
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
S + N +I+MY + ++EA F + KD++SWN++IA + + + +F
Sbjct: 232 NLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVF 291
Query: 326 EEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
+ M ++ V+PD TF +++C + GK + + L +L + +V++ +
Sbjct: 292 KHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAK 351
Query: 385 AGLLEEARDFIKQMPIYPNAVIW 407
G + A D +M ++ N V W
Sbjct: 352 CGCIGYAYDIFSKM-VHHNLVSW 373
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 124/210 (59%), Gaps = 3/210 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS+ + C T+ +R G ++TG ++V++ + ++ +Y+KC A +VF+EM
Sbjct: 6 LSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMF 65
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N+VSW+A+I+ + Q + M ++LY M L PN++ F S++SAC A+ G+
Sbjct: 66 EKNLVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQK 122
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++++ G+ S V+NSLISMY KC +A+ VF N + VS+N++I G+ ++
Sbjct: 123 IHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQ 182
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
R ++ F+ M +Q + PD F+GV+ C
Sbjct: 183 LERGLEFFKLMRQQGLIPDRFAFMGVLGIC 212
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T +S+L C+ + AL G S H ++ G S + ++N +++MY KCG+ A VF+ M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
K++VSW++MI+GY Q G AIDL+ +M + P+ F VIS+C
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISAC 111
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
H ++ D ++A+ +C ++ G +RT ++ VG++L+ +Y+KC
Sbjct: 293 HMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKC 352
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
I AY +F +M N+VSW IIA F + +EL+ M S + P+ TF +L
Sbjct: 353 GCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLL 412
Query: 244 SACTGSGALGQGR-SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+AC +G + +G+ + G I+ + LI M + G + EA
Sbjct: 413 TACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA 460
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 208/371 (56%), Gaps = 18/371 (4%)
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
R G IR+G + V ++L+ LY KC + +A +F++M +++VSWT +I
Sbjct: 213 RRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRC 272
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
++ + L+R + S + PN++TF +L+AC A G+ H R+G+ +
Sbjct: 273 FEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFS 332
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
A++L+ +Y KCGN E A VFN M D+VSW S+I GYAQ+G A+ FE +++
Sbjct: 333 FAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRS 392
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEE 390
KPD ITF+GV+S+C H GLV+ G YF S+ KHGL DHY+CV+DLL R+G +E
Sbjct: 393 GTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKE 452
Query: 391 ARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAG 433
A + I MP+ P+ +W AA++ LEPE AT++ L+N+YA
Sbjct: 453 AENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYAN 512
Query: 434 VRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQ 493
W + +VR M ++G+ PG SWIEI V+ F D S+ ++S+I L L +
Sbjct: 513 AGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKK 572
Query: 494 MKTLGYVPEVH 504
MK GYV + +
Sbjct: 573 MKEEGYVADTN 583
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 140/302 (46%), Gaps = 35/302 (11%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY-------- 190
ST + +C R + G + FI + + + LI +Y+KC ++DA
Sbjct: 67 STLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQ 126
Query: 191 -----------------------KVFEEMPVRNVVSWTAIIAAF-AQEWQVDMCLELYRM 226
K+F+EMP R+ SW A+I+ + +Q W ++ L+L+RM
Sbjct: 127 KDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYME-ALDLFRM 185
Query: 227 MR-NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ N N FT +S L+A +L +G+ H IR G V +L+ +Y KCG
Sbjct: 186 MQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCG 245
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++ EA +F+ M KDIVSW +MI + G LF ++M V+P+ TF GV++
Sbjct: 246 SLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLN 305
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
+C + GK M + G P S +V + + G E AR QMP P+ V
Sbjct: 306 ACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLV 364
Query: 406 IW 407
W
Sbjct: 365 SW 366
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 23/280 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLI-------------SMHHDLHRERLKVDASFLSTAVTSCGS 147
+ +FDQ+ D +V +I S+ DL ++ + + + +C
Sbjct: 250 ARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACAD 309
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+ G R G+ + S+L+ +YSKC A +VF +MP ++VSWT++
Sbjct: 310 LAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSL 369
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG-RSAHCQTIRMG 266
I +AQ Q DM L+ + + S +P++ TF +LSACT +G + G H + G
Sbjct: 370 IVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHG 429
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHG---LAVRAI 322
+I + + G +EA + +NM K D W S++ G HG LA RA
Sbjct: 430 LVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAA 489
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGL-VEEGKVYFD 361
E+ + + T++ + + + GL EE KV D
Sbjct: 490 KALFELEPE----NPATYITLSNIYANAGLWTEETKVRND 525
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 40/202 (19%)
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+P+ ++++++AC L G+ H T F I ++N LI MY KCG++ +A
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F+ + KD+ SWN+MI+GYA G +A LF+EM + D ++ VIS G
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGW 175
Query: 353 VEE------------------------------------GKVYFDSMAKHGLKPELDHYS 376
E GK + + GL+ + ++
Sbjct: 176 YMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWT 235
Query: 377 CVVDLLGRAGLLEEARDFIKQM 398
++DL G+ G L EAR QM
Sbjct: 236 ALLDLYGKCGSLNEARGIFDQM 257
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 239/408 (58%), Gaps = 28/408 (6%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
V K++++ ++ E +K + S+ + SC S + G I++ + VG
Sbjct: 338 VQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVG 397
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++L+++Y++ + +A +VF ++ R+++ +++ +D +R++R +
Sbjct: 398 NALVSMYAESGCMEEARRVFNQLYERSMIP----CITEGRDFPLD-----HRIVRMD-VG 447
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ TF S++SA G L +G+ H +++ GF S V+NSL+SMY +CG +E+A
Sbjct: 448 ISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRS 507
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
FN + ++++SW SMI+G A+HG A RA+ LF +M+ VKP+ +T++ V+S+C H GLV
Sbjct: 508 FNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLV 567
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
EGK YF SM + HGL P ++HY+C+VDLL R+G+++EA +FI +MP+ +A++W+
Sbjct: 568 REGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLG 627
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A++ + LEP A +V L+NLYA WD+ AR+R M+D L
Sbjct: 628 ACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKE 687
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
G SW+E+ N + FRA D S+ R +I LD LV Q+K +GYVP+
Sbjct: 688 TGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDT 735
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 122/235 (51%), Gaps = 6/235 (2%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+V VGS+LI + ++ + A KVF+ + + VV WT +I+ + Q + +EL+
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
EP+ +T +S++SACT G++ G H +RMG S V+ L+ MY K N+
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAK-SNIG 305
Query: 289 EAV----YVFNNMHGKDIVSWNSMIAGYAQHGLAV-RAIDLFEEMMKQRVKPDAITFLGV 343
+A+ VF M D++SW ++I+GY Q G+ + + LF EM+ + +KP+ IT+ +
Sbjct: 306 QAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSI 365
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ SC + G+ + K + +V + +G +EEAR Q+
Sbjct: 366 LKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQL 420
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 23/255 (9%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEM-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
+ V +SL+TLYS+C + A VF+ M +R++VSWTA+ + A+ L L M
Sbjct: 83 DAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEM 142
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI--------RMGFFSY-IQVANSLI 278
S L PN +T + AC +C +MG + + V ++LI
Sbjct: 143 LESGLLPNAYTLCAAAHACF-------PHELYCLVGGVVLGLVHKMGLWGTDVAVGSALI 195
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
M + G++ A VF+ + K +V W +I+ Y Q A A++LF + ++ +PD
Sbjct: 196 DMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRY 255
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL---LEEARDFI 395
T +IS+C G V G + GL + +VD+ ++ + ++ A
Sbjct: 256 TMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVF 315
Query: 396 KQMPIYPNAVI-WEA 409
++MP N VI W A
Sbjct: 316 ERMP--KNDVISWTA 328
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 250 GALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNS 307
G L GR+ H + +R VANSL+++Y +CG V A VF+ M G +DIVSW +
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC-RHGGLVEEGKVYFDSMAKH 366
M + A++G ++ L EM++ + P+A T +C H G V + K
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKM 181
Query: 367 GL-KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHV 425
GL ++ S ++D+L R G L AR + I V+W SR ++ ECA V
Sbjct: 182 GLWGTDVAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLISR-YVQGECAEEAV 239
Query: 426 QL 427
+L
Sbjct: 240 EL 241
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 216/368 (58%), Gaps = 19/368 (5%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C S +++ G C I+ + ++G+ +IT+YSK ++ +A K F + +++
Sbjct: 209 LGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDL 268
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNS-MLEPNDFTFTSILSACTGSGALGQGRSAHC 260
+SW I++ + + LE ++ M N + P++FTF S L+AC+G ++ G+ H
Sbjct: 269 ISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHG 328
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
IR + + N+LI+MY KCG + +A Y+F+ M +++VSWN+MIAG+ HG +
Sbjct: 329 HLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGK 388
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVV 379
A +LF +M VKPD++TF+G++++ H GLV+EG VYF+SM + +G+ PE++H+SC++
Sbjct: 389 AFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLI 448
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAA 422
DLLGRAG L EA++++K+ P + V+ + A L L+P +
Sbjct: 449 DLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGKCFARQLLKLQPATTS 508
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
+V L+NLYA WD A KL+K GLK PG S IE+ +F D S++R+ E
Sbjct: 509 PYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHSLIEVNGTFEKFTVVDFSHSRIEE 568
Query: 483 ILPVLDFL 490
I+ +L L
Sbjct: 569 IMDMLKIL 576
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 138/256 (53%), Gaps = 3/256 (1%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+ + + C T+ +R G P +AI+T ++V V + ++ LY+KCR + +A +VF+EM
Sbjct: 5 LVGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEM 64
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
RN+VSW+A+I+ + Q + L L+ + + PN++ + S++SAC L QG+
Sbjct: 65 SERNLVSWSAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLVQGK 121
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H Q ++ G S V+N+LI+MY KCG +A+ +N + V++N++I G+ ++
Sbjct: 122 QIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQ 181
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+ ++ M + PD TF+G++ +C ++ G++ K L +
Sbjct: 182 QPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGN 241
Query: 377 CVVDLLGRAGLLEEAR 392
++ + + LLEEA
Sbjct: 242 LIITMYSKLNLLEEAE 257
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 153/315 (48%), Gaps = 12/315 (3%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDLHR--------ERLKV--DASFLSTAVTSCGSTRNIRG 153
VFD++ + +V +IS + + +L + + ++ +++C S + +
Sbjct: 60 VFDEMSERNLVSWSAMISGYEQIGEPISALGLFSKLNIVPNEYVYASVISACASLKGLVQ 119
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G A++ G + +V ++LIT+Y KC DA + E N V++ A+I F +
Sbjct: 120 GKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVE 179
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
Q D E+ RMM P+ FTF +L C L +G HCQTI++ S +
Sbjct: 180 NQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFI 239
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-R 332
N +I+MY K +EEA F ++ KD++SWN+ I+ + +A++ F+EM+ + R
Sbjct: 240 GNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECR 299
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
V+PD TF +++C + GK + + L ++ + ++++ + G + +A
Sbjct: 300 VRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAY 359
Query: 393 DFIKQMPIYPNAVIW 407
+M + N V W
Sbjct: 360 YIFSKME-HQNLVSW 373
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 228/385 (59%), Gaps = 17/385 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + +C + G +++GF ++ +V ++L+ Y+KC I+ A KVF+E+
Sbjct: 164 MAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEIT 223
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN+V+W+ +I+ +A+ V+ L L+R M+ + + P++ T S++SAC SGAL G+
Sbjct: 224 DRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKW 283
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + + ++++ +L++MY KCG +E A VF+ M KD +W+SMI G A +GL
Sbjct: 284 VHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGL 343
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A A++ F M + +VKP+ +TF+GV+S+C H GLV EG+ Y+ SM + G+ P ++ Y C
Sbjct: 344 AEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGC 403
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPEC 420
+VDLL RA L+E+A ++ MPI PN VIW E RLL LEP
Sbjct: 404 MVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHN 463
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
A ++ L+NLYA + W++ ++VRK MK G+K PGCS IE+ +V+ F D S+
Sbjct: 464 AENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEA 523
Query: 481 SEILPVLDFLVDQMKTLGYVPEVHE 505
E+ +L + ++ +G+ P + +
Sbjct: 524 MEVREILRDISKRVHAVGHQPGISD 548
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 118/214 (55%), Gaps = 2/214 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEW--QVDMCLELYRMMRNSMLEPNDFTFTSILSAC 246
A K+F ++ N+ SW ++I +Q + + +M+R PN FT +L AC
Sbjct: 112 ARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKAC 171
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ AL +G+ H ++ GF S V +L++ Y KC ++ A VF+ + +++V+W+
Sbjct: 172 SIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWS 231
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+MI+GYA+ GL A+ LF +M K V PD +T + VIS+C G ++ GK + K
Sbjct: 232 TMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQ 291
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
++ +L+ + +V++ + G +E A++ MP+
Sbjct: 292 LIETDLELSTALVNMYAKCGCIERAKEVFDAMPV 325
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR-AIDLFEEMMKQRV-KPDAITFLG 342
G+++ A +F+ + +I SWNSMI G +Q + + LF +M+++ P+ T
Sbjct: 107 GDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAF 166
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGL 368
V+ +C +EEG+ ++ K G
Sbjct: 167 VLKACSIVSALEEGQQVHANVLKSGF 192
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 227/404 (56%), Gaps = 18/404 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I M + R + + L++ + +C S +++ G C ++ G NV+V ++L
Sbjct: 329 EEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNAL 388
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC + ++ ++F E P VSW +I + Q + L L++ M ++ +
Sbjct: 389 MDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTE 448
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T++S+L AC G AL G H +++ + V N+LI MY KCGN+++A VF+
Sbjct: 449 VTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDM 508
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ D VSWN+MI+GY+ HGL A+ FE M++ KPD +TF+G++S+C + GL++ G
Sbjct: 509 LREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRG 568
Query: 357 KVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA------ 409
+ YF SM ++ ++P +HY+C+V LLGR+G L++A + ++P P+ ++W A
Sbjct: 569 QAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACV 628
Query: 410 -----------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
A+ L +EPE ATHV L+N+YA R W A +R MK KG++ PG
Sbjct: 629 IHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGL 688
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SWIE V+ F D S+ I +L++L + + GYVP+
Sbjct: 689 SWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPD 732
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 138/257 (53%), Gaps = 2/257 (0%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G A + C A +T ++ ++VG LI LY K + DA +VFEEMP +V+ W+ +IA +A
Sbjct: 265 GKAVHGC-AFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYA 323
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
Q Q + +E++ MR ++ PN FT S+L AC L G HC +++G +
Sbjct: 324 QSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVF 383
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V+N+L+ MY KCG +E ++ +F+ VSWN++I GY Q G +A+ LF++M++ +
Sbjct: 384 VSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQ 443
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
V+ +T+ V+ +C +E G K + ++D+ + G +++AR
Sbjct: 444 VQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDAR 503
Query: 393 DFIKQMPIYPNAVIWEA 409
+ M + V W A
Sbjct: 504 -LVFDMLREHDQVSWNA 519
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 136/280 (48%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + L E +++ ST + S + G + GF ++ +VG++LI
Sbjct: 130 IGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDC 189
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YS C A +VF+ + +++VSWT ++A + + + L+L+ MR +PN+FTF
Sbjct: 190 YSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTF 249
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+L AC G G++ H + + + V LI +Y K G+V++A+ VF M
Sbjct: 250 ASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPK 309
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
D++ W+ MIA YAQ + AI++F M + V P+ T ++ +C ++ G
Sbjct: 310 DDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQI 369
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ K GL + + ++D+ + G +E + + P
Sbjct: 370 HCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP 409
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 120/258 (46%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC + G C I+ G +++ + L+ Y K + DA K+F+EMP RN
Sbjct: 51 LQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNT 110
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VS+ +I ++Q + + L+ ++ E N F F+++L + G S H
Sbjct: 111 VSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHAC 170
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++GF S V +LI Y CG E A VF+ + KD+VSW M+A Y ++ +
Sbjct: 171 VYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEES 230
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ LF M KP+ TF V+ +C + GK K EL ++DL
Sbjct: 231 LKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDL 290
Query: 382 LGRAGLLEEARDFIKQMP 399
++G +++A ++MP
Sbjct: 291 YIKSGDVDDALQVFEEMP 308
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 26/242 (10%)
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
E N + + S+L +C +G G+ HC+ I+ G + N L++ Y K ++ +A
Sbjct: 41 EFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAK 100
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F+ M ++ VS+ ++I GY+Q AI LF + + + + F V+
Sbjct: 101 LFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+ G + K G + + ++D G E AR + Y + V W
Sbjct: 161 AKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIE-YKDMVSWTG--- 216
Query: 413 RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN--------PGCSWIEIM 464
+ Y C++++ ++ M+ G K N C +E+
Sbjct: 217 --------------MVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVF 262
Query: 465 NV 466
NV
Sbjct: 263 NV 264
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/503 (30%), Positives = 247/503 (49%), Gaps = 68/503 (13%)
Query: 66 EVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHD 125
EVH I+ + +D+ H + G+ VFD L+ VV + S + +
Sbjct: 153 EVHDDAIRCGMMSDA--FLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVN 210
Query: 126 LHRERL-------------KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
RL K ++ LS+ + +C ++++ G A+R G I NV+V
Sbjct: 211 CGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFV 270
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF--------------------- 211
S+L++LY++C + A VF+ MP R+VVSW ++ A+
Sbjct: 271 CSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGV 330
Query: 212 --------------AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ Q + +E+ R M+N +PN T +S L AC+ +L G+
Sbjct: 331 EADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKE 390
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
HC R + +L+ MY KCG++ + VF+ + KD+V+WN+MI A HG
Sbjct: 391 VHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGN 450
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
+ LFE M++ +KP+++TF GV+S C H LVEEG F+SM + H ++P+ +HY+
Sbjct: 451 GREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYA 510
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+VD+ RAG L EA +FI++MP+ P A W A A +EP
Sbjct: 511 CMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPN 570
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+V L N+ + W +A+ R LMK++G+ PGCSW+++ + V+ F DK+N
Sbjct: 571 NPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNME 630
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I LD L ++MK+ GY P+
Sbjct: 631 SDKIYNFLDELGEKMKSAGYKPD 653
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 169/352 (48%), Gaps = 23/352 (6%)
Query: 24 LSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHL 83
SI + + S KQ++S+K ++P + + + LRL++ L
Sbjct: 36 FSITHSTQSSSIWKQLTSTK-----------VAPSVPTNIPSHLGLRLLKAALNVGDFRR 84
Query: 84 DSQKFNH----DFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLS 139
Q F++ D T T ST S+ L + + I ++ L +K S
Sbjct: 85 AQQLFDNIPQPDPT-TCSTLISAFTTRGLPN-------EAIRLYASLRARGIKPHNSVFL 136
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
T +CG++ + AIR G +++ ++G++LI Y KC+ + A +VF+++ V+
Sbjct: 137 TVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVK 196
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+VVSWT++ + + + L ++ M + ++PN T +SIL AC+ L GR+ H
Sbjct: 197 DVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIH 256
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+R G + V ++L+S+Y +C +V++A VF+ M +D+VSWN ++ Y +
Sbjct: 257 GFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYD 316
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+ + LF +M + V+ D T+ VI C G E+ M G KP
Sbjct: 317 KGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPN 368
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A ++F+ +P + + + +I+AF + + LY +R ++P++ F ++ AC
Sbjct: 85 AQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGA 144
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
SG + + H IR G S + N+LI Y KC VE A VF+++ KD+VSW SM
Sbjct: 145 SGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSM 204
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ Y GL + +F EM VKP+++T ++ +C ++ G+ +HG+
Sbjct: 205 SSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGM 264
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S +V L R +++AR MP + + V W
Sbjct: 265 IENVFVCSALVSLYARCLSVKQARLVFDLMP-HRDVVSWNG 304
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G+ A +F+N+ D + +++I+ + GL AI L+ + + +KP FL V
Sbjct: 80 GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C G K D + G+ + + ++ G+ +E AR + + +
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDL-VVKDV 198
Query: 405 VIWEAAES 412
V W + S
Sbjct: 199 VSWTSMSS 206
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 213/370 (57%), Gaps = 20/370 (5%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN- 200
V SC G + G +N V +SL+ +Y KC + DA++VFEEM R+
Sbjct: 169 VKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDA 228
Query: 201 -VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+ SWTAI++ +A+ LE +R M+ +EP++ + S+L C GAL G+ H
Sbjct: 229 TIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIH 288
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+ GF I V N+LI MY KCG++++ +F+ M +D++SW++MI G A HG A
Sbjct: 289 IYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAR 348
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCV 378
AI+LF+EM K +++P ITF+G++++C H GL+ EG YF+SM + + ++P ++HY C+
Sbjct: 349 EAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCL 408
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECA 421
V+LLG +G L++A + +K+MP P++ IW A E L LEP
Sbjct: 409 VNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADT 468
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
+V L+NLYA + WD +R+RKLM+ K +K PGCS IE+ N+V F + D S
Sbjct: 469 GNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDSKPFSK 528
Query: 482 EILPVLDFLV 491
I VL LV
Sbjct: 529 AICRVLKLLV 538
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 7/214 (3%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLE----PNDFTFTSILSAC 246
+F+ + N + A+I A+ + + +Y+ M+ N E P+ FTF ++ +C
Sbjct: 113 LFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSC 172
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD--IVS 304
G G+ H + G S V NSL+ MY KC ++++A VF M +D I S
Sbjct: 173 AGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFS 232
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W ++++GYA+ G A++ F M ++PD I+ + V+ C G +E GK
Sbjct: 233 WTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYAD 292
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
K G + + ++++ + G +++ R QM
Sbjct: 293 KAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQM 326
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 5/203 (2%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D L + + C + G A + GF+ N+ V ++LI +Y+KC I
Sbjct: 261 IEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGR 320
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
++F++M R+V+SW+ +I A + +EL++ M+ + +EP+ TF +L+AC +G
Sbjct: 321 RLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAG 380
Query: 251 ALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSM 308
L +G R ++ L+++ G +++A+ + M K D W S+
Sbjct: 381 LLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSL 440
Query: 309 IAGYAQHG---LAVRAIDLFEEM 328
++ HG +AV A++ E+
Sbjct: 441 LSSCRSHGNLKIAVIAMEHLLEL 463
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 228/429 (53%), Gaps = 31/429 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD + D VV +IS M L L D+ + +++C +
Sbjct: 169 VFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGD 228
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G + G + NV+VG+SL+ +Y+KC + A VF+ MP +++VSW A+I
Sbjct: 229 LNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQG 288
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+A ++L+ M+ ++P+ +T +LSAC GAL G R F
Sbjct: 289 YALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYN 348
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ +LI +Y KCG++ A VF M KD V WN++I+G A +G + LF ++ K
Sbjct: 349 PVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEK 408
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
+KPD TF+G++ C H GLV+EG+ YF+SM + L P ++HY C+VDLLGRAGLL+
Sbjct: 409 LGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLD 468
Query: 390 EARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYA 432
EA I+ MP+ NA++W E A +L+ LEP + +V L+N+Y+
Sbjct: 469 EAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYS 528
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
WD+AA+VR M +K ++ PGCSWIE+ +V+ F DK + +I LD L
Sbjct: 529 ANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTK 588
Query: 493 QMKTLGYVP 501
+MK GYVP
Sbjct: 589 KMKVAGYVP 597
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 156/275 (56%), Gaps = 1/275 (0%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C +++ G L ++ GF +V+V +SL+ LY+KC + DA+KVF+++P +NV
Sbjct: 119 LKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNV 178
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWTAII+ + + ++++R + L P+ FT +LSACT G L G H
Sbjct: 179 VSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKC 238
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
+ MG + V SL+ MY KCGN+E+A VF+ M KDIVSW +MI GYA +GL A
Sbjct: 239 IMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEA 298
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
IDLF +M ++ VKPD T +GV+S+C G +E G+ + ++ + ++DL
Sbjct: 299 IDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDL 358
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ G + A + K M + V+W A S L +
Sbjct: 359 YAKCGSMSRAWEVFKGMK-EKDRVVWNAIISGLAM 392
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F ++ N+ W +I D +E Y +MR+ PN+FTF +L AC
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L G H ++ GF + V SL+ +Y KCG +E+A VF+++ K++VSW ++I+G
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Y G AID+F +++ + PD+ T + V+S+C G + G+ + + G+
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + +VD+ + G +E+AR MP
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMP 275
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 275 NSLISMYCKCG----NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
N L++M +C + ++F+ + +I WN+MI G + AI+ + M
Sbjct: 46 NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+ P+ TF V+ +C ++ G + K G ++ + +V L + G LE+
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165
Query: 391 ARDFIKQMPIYPNAVIWEA 409
A +P N V W A
Sbjct: 166 AHKVFDDIP-DKNVVSWTA 183
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 233/431 (54%), Gaps = 61/431 (14%)
Query: 129 ERLKVDASFLSTAVTSCGST------RNIRGGAPYQCLAIRTGFI--ANVYVGSSLITLY 180
E++ +D ++ +++C + +++ G Q + ++ F+ A + V ++L+TLY
Sbjct: 294 EKVPLDEFTFTSVLSACANAGFFVHGKSVHG----QIIRLQPNFVPEAALPVNNALVTLY 349
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE--------------------WQV--- 217
SK I+ A ++F+ M +++VVSW I++ + W V
Sbjct: 350 SKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVS 409
Query: 218 --------DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ L+L+ MR ++P D+T+ ++AC GAL GR H ++ GF +
Sbjct: 410 GYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEA 469
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
N+L++MY KCG V +A VF M D VSWN+MI+ QHG A++LF++M+
Sbjct: 470 SNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMV 529
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLL 388
+ + PD I+FL ++++C H GLV+EG YF+SM + G+ P DHY+ ++DLLGR+G +
Sbjct: 530 AEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRI 589
Query: 389 EEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLY 431
EARD IK MP P IWE AA+ + P+ T++ L+N Y
Sbjct: 590 GEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTY 649
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
+ W AARVRKLM+D+G+K PGCSWIE+ + ++ F D + E+ L+ +
Sbjct: 650 SAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIG 709
Query: 492 DQMKTLGYVPE 502
+M+ LGYVP+
Sbjct: 710 ARMRKLGYVPD 720
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 53/326 (16%)
Query: 109 LDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPY----QCLAIRT 164
L P V V H L L+ D + +++ G N+ AP+ C +++
Sbjct: 142 LAAPAVSV-----FHALLGSGSLRPDDYSFTALISAVGQMHNL--AAPHCTQLHCSVLKS 194
Query: 165 GFIANVYVGSSLITLYSKC---RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE------- 214
G A + V ++LI LY KC DA KV +EMP ++ ++WT ++ + +
Sbjct: 195 GAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAAR 254
Query: 215 -------------W--------QVDMC---LELYRMMRNSMLEPNDFTFTSILSACTGSG 250
W Q MC EL+R M + + ++FTFTS+LSAC +G
Sbjct: 255 SVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAG 314
Query: 251 ALGQGRSAHCQTIRM--GFF--SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G+S H Q IR+ F + + V N+L+++Y K G + A +F+ M+ KD+VSWN
Sbjct: 315 FFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWN 374
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++++GY G +A+++F+ M + + ++++ ++S HGGL E+ F+ M
Sbjct: 375 TILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSEDALKLFNQMRAE 430
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEAR 392
+KP Y+ + G G L+ R
Sbjct: 431 DVKPCDYTYAGAIAACGELGALKHGR 456
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYR-MMRN 229
+SL+ ++ + DA F+ +P R+ V A+++AFA+ + ++ ++ +
Sbjct: 97 ATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 156
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSA--HCQTIRMGFFSYIQVANSLISMYCKC--- 284
L P+D++FT+++SA L HC ++ G + + V+N+LI++Y KC
Sbjct: 157 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 216
Query: 285 -------------------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+V A VF + GK V WN+MI+GY
Sbjct: 217 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 276
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
Q G+ A +LF M+ ++V D TF V+S+C + G GK
Sbjct: 277 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGK 320
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 211/353 (59%), Gaps = 18/353 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+V +++IT Y K + A ++F+EM +R +V+W A+IA + + + + L L+R M
Sbjct: 196 SVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTML 255
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ ++PN + TS+L C+ AL G+ H + S SL+SMY KCG+++
Sbjct: 256 ETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLK 315
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A +F + KD+V WN+MI+GYAQHG +A+ LF+EM K+ +KPD ITF+ V+ +C
Sbjct: 316 DAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACN 375
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV+ G YF++M + G++ + +HY+C+VDLLGRAG L EA D IK MP P+ I+
Sbjct: 376 HAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIY 435
Query: 408 E-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AA++ L L+P A +VQLAN+YA WD A +R+ MKD
Sbjct: 436 GTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDN 495
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ PG SWIEI +VV+ FR+ D+ + L+ I L L +MK GYVP++
Sbjct: 496 NVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDL 548
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 83/357 (23%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV + LI Y +C I A +VFE+M V++ V+W +I+AAFA++ E R +
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKK---PGHFEYARQLF 96
Query: 229 NSMLEPNDFTF-------------------------------TSILSACTGSGALGQGR- 256
+ +PN ++ +++SA G +G+ R
Sbjct: 97 EKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARR 156
Query: 257 ------SAHCQTIRMGFFSYIQVAN--------------------SLISMYCKCGNVEEA 290
+C + Y+ + ++I+ Y K G VE A
Sbjct: 157 LFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELA 216
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F M + +V+WN+MIAGY ++G A + LF M++ VKP+A++ V+ C +
Sbjct: 217 ERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNL 276
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA 410
++ GK + K L + + +V + + G L++A + Q+P + V W A
Sbjct: 277 SALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP-RKDVVCWNA- 334
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
+ + YA +A R+ MK +GLK + WI + V+
Sbjct: 335 ----------------MISGYAQHGAGKKALRLFDEMKKEGLKPD----WITFVAVL 371
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 89/169 (52%), Gaps = 3/169 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+K +A L++ + C + ++ G L + ++ G+SL+++YSKC + DA+
Sbjct: 259 VKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAW 318
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
++F ++P ++VV W A+I+ +AQ L L+ M+ L+P+ TF ++L AC +G
Sbjct: 319 ELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAG 378
Query: 251 ALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+ G + T+R G + + ++ + + G + EAV + +M
Sbjct: 379 LVDLG-VQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSM 426
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 219/401 (54%), Gaps = 22/401 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+K I + L RE + D + + + + L I GF ++ + ++L
Sbjct: 226 DKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNAL 285
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LYSKC + A ++FEE+P ++VVSWT II F Q ++ + L+ M+ +EPN
Sbjct: 286 VNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNS 345
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVYVFN 295
FTF +L AC + A +GR H ++ G + V ++++ MY KCG + +A+ F
Sbjct: 346 FTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQ 405
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM---KQRVKPDAITFLGVISSCRHGGL 352
M +DI SWN +I GYAQ+G ++A+ L+ EM+ + P+ +TF+GV+ +C H GL
Sbjct: 406 EMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGL 465
Query: 353 VEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-- 409
++EG YF M KH +KP +HY+C+VDLLGRAGLL+EA I +PI P+ V+W A
Sbjct: 466 LKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALL 525
Query: 410 ---------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
AE EP ++ +V LAN Y + W +A +R++M+ +G++
Sbjct: 526 GACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEK 585
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
GCSW+EI ++ F A D + ++ VL L QM+
Sbjct: 586 TAGCSWVEIGTCMHSFLAGDXLHPQIEVASQVLPRLYLQMR 626
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 126/232 (54%), Gaps = 1/232 (0%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+ ++G++L+ +Y++ I DA KVF+ MP R +V+W A+I+ +++ + D + L+R +
Sbjct: 177 DAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLX 236
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ +++T+ +L+ + + H I GF S N+L+++Y KCG V
Sbjct: 237 REGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVA 296
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A +F + +D+VSW +I G+ Q G A+ LF +M ++P++ TF G++ +C
Sbjct: 297 SASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACA 356
Query: 349 HGGLVEEGKVYFDSMAKHG-LKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++G+ + + K G L ++ S VVD+ + G + +A ++MP
Sbjct: 357 DANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMP 408
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 125/269 (46%), Gaps = 35/269 (13%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF---------- 211
++ G IA+VY + L+ Y + + DA+K+ MP +VVS+ I++ +
Sbjct: 42 VKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLVSEAI 101
Query: 212 ----------AQEWQVDM--CLELYRM---------MRNSMLEPNDFTFTSILSACTGSG 250
W + + C++ +++ MR S + P++FT+ I+ C
Sbjct: 102 KLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCCD--- 158
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
LG G+ H +++ + +L+ MY + G + +A VF+ M + +V+WN+MI+
Sbjct: 159 -LGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMIS 217
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
Y+++G ++I LF ++ ++ + D T+ V++ V E + + G
Sbjct: 218 CYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCS 277
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + +V+L + G + A +++P
Sbjct: 278 DRFTNNALVNLYSKCGYVASASRLFEEIP 306
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H ++ G +++ N L+ Y + +A + + M +VS+N++++GY + GL
Sbjct: 38 HASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLV 97
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
AI LF+ K+ D ++ V+S C + EG +F M ++P+ Y+ +
Sbjct: 98 SEAIKLFDGTSKR----DCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAII 153
Query: 379 V 379
+
Sbjct: 154 I 154
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 209/367 (56%), Gaps = 18/367 (4%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G C A++ G N+YV +LI +Y+ C I + +VF+++ VV++ AII + A+
Sbjct: 131 GKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLAR 190
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ + L L+R ++ L+P D T +LS+C G+L GR H + GF Y++V
Sbjct: 191 NNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKV 250
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+LI MY KCG++++AV VF +M +D +W+++I YA HG +AI + EM K++V
Sbjct: 251 NTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKV 310
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+PD ITFLG++ +C H GLVEEG YF M ++G+ P + HY C+VDLLGRAG L+EA
Sbjct: 311 QPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAY 370
Query: 393 DFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVR 435
FI ++PI P ++W E L+ +V +NL A
Sbjct: 371 KFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYG 430
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
WD +RK M DKG PGCS IE+ NVV+ F A + ++ + + LD LV ++K
Sbjct: 431 KWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELK 490
Query: 496 TLGYVPE 502
+ GYVP+
Sbjct: 491 SAGYVPD 497
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 120/245 (48%), Gaps = 18/245 (7%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFEEMPVRNVVSWTAIIAAFAQE 214
Q I+T + N V + I + + A+++F+++ N+V + + +A+
Sbjct: 46 QAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYAR- 104
Query: 215 WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
+ RM+ + F L + AL +G+ HC +++G + V
Sbjct: 105 -----LNDPLRMITH---------FRRCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVV 150
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
+LI+MY CG+++ + VF+ + +V++N++I A++ A A+ LF E+ + +K
Sbjct: 151 PTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLK 210
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
P +T L V+SSC G ++ G+ + + K+G + + ++D+ + G L++A +
Sbjct: 211 PTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNV 270
Query: 395 IKQMP 399
+ MP
Sbjct: 271 FRDMP 275
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 207/372 (55%), Gaps = 18/372 (4%)
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+R G IRT + V S+L+ LY KC + +A +F++M R+VVSWT +I
Sbjct: 236 LRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHR 295
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
++ + + L+R + S + PN++TF +L+AC A G+ H + G+
Sbjct: 296 CFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPG 355
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
++L+ MY KCGN A VFN MH D+VSW S+I GYAQ+G A+ FE +++
Sbjct: 356 SFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQ 415
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLE 389
KPD +T++GV+S+C H GLV++G YF S+ KHGL DHY+CV+DLL R+G +
Sbjct: 416 SGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFK 475
Query: 390 EARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYA 432
EA + I MP+ P+ +W AA++ +EPE AT++ LAN+YA
Sbjct: 476 EAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYA 535
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
W + A VRK M + G+ PG SWIEI V+ F D S+ + S+I L L
Sbjct: 536 NAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSK 595
Query: 493 QMKTLGYVPEVH 504
++K GYVP+ +
Sbjct: 596 KIKEEGYVPDTN 607
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 137/314 (43%), Gaps = 33/314 (10%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
LHR + A ST + +C R + G + F+ V++ + L+ +Y+KC
Sbjct: 78 LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGS 137
Query: 186 IIDAY-------------------------------KVFEEMPVRNVVSWTAIIAAFAQE 214
++DA K+F+EMP R+ SW A I+ +
Sbjct: 138 LVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTH 197
Query: 215 WQVDMCLELYRMM-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
Q LEL+R+M R+ N FT +S L+A L G+ H IR V
Sbjct: 198 NQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVV 257
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
++L+ +Y KCG+++EA +F+ M +D+VSW +MI + G LF ++M+ V
Sbjct: 258 WSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGV 317
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+P+ TF GV+++C GK M G P S +V + + G AR
Sbjct: 318 RPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARR 377
Query: 394 FIKQMPIYPNAVIW 407
+M P+ V W
Sbjct: 378 VFNEMH-QPDLVSW 390
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 18/246 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGS 147
+ +FDQ+ D VV +I + DL + ++ + + + +C
Sbjct: 274 ARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACAD 333
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
G + G+ + S+L+ +YSKC A +VF EM ++VSWT++
Sbjct: 334 HAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSL 393
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG-RSAHCQTIRMG 266
I +AQ Q D L + ++ S +P+ T+ +LSACT +G + +G H + G
Sbjct: 394 IVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHG 453
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHG---LAVRAI 322
+I + + G +EA + +NM K D W S++ G HG LA RA
Sbjct: 454 LMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAA 513
Query: 323 DLFEEM 328
E+
Sbjct: 514 KALYEI 519
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 40/213 (18%)
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
E ++ + P+ ++++++AC AL GR H T F + ++N L+ MY
Sbjct: 73 EAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMY 132
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++ +A +F+ M +D+ SWN+MI GYA+ G +A LF+EM ++ D ++
Sbjct: 133 AKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQR----DNFSWN 188
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHG-----------------------LKPELDHY--- 375
IS E F M +H L E+ Y
Sbjct: 189 AAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIR 248
Query: 376 ----------SCVVDLLGRAGLLEEARDFIKQM 398
S ++DL G+ G L+EAR QM
Sbjct: 249 TELNLDEVVWSALLDLYGKCGSLDEARGIFDQM 281
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 220/400 (55%), Gaps = 19/400 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I M+ + + +K D + + +C + RN+R GA +R G +V +SL+ +
Sbjct: 194 IQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDM 253
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K ++ A +VF M RN VSW+A+I+ FAQ Q D L L+R M+ S ++P+
Sbjct: 254 YAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGAL 313
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S L AC+ G L GRS H +R F+ I + + I MY KCG++ A +FN +
Sbjct: 314 VSALLACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGSLASAQMLFNMISD 372
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D++ WN+MIA HG A+ LF+EM + ++PD TF ++S+ H GLVEEGK++
Sbjct: 373 RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLW 432
Query: 360 FDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
F M H + P HY C+VDLL R+GL+EEA D + M P IW A
Sbjct: 433 FGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNK 492
Query: 410 --------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
A++ L L+P+ ++NLYA + WD+ +VRKLMKD G K PGCS I
Sbjct: 493 KLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSI 552
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
EI + F ED+S+ + EI+ + L +M+ +GY+P
Sbjct: 553 EIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIP 592
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 149/283 (52%), Gaps = 12/283 (4%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
+ D++ + A+++C ++RGG + A G+ +V+V SSL+ LY++ + DA K
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+ MP R+ V+W+ ++A F Q +++YR MR ++ ++ ++ ACT +
Sbjct: 165 VFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ G S H +R G + A SL+ MY K G ++ A VF M ++ VSW++MI+G
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISG 284
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+AQ+G + A+ LF M ++PD+ + + +C + G ++ G+ + HG
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR------SVHGFIVR 338
Query: 372 LDHYSCV-----VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++C+ +D+ + G L A+ + M + ++W A
Sbjct: 339 RFDFNCILGTAAIDMYSKCGSLASAQ-MLFNMISDRDLILWNA 380
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 235/406 (57%), Gaps = 23/406 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K ++++ ++ + K+D L++ + + S ++ GG + I+ GF N +VGS LI
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLI 282
Query: 178 TLYSKC---RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV-DMCLELYRMMRNSMLE 233
YSKC + D+ KVF+E+ ++V W +I+ ++ ++ + ++ +R M+
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHR 342
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVY 292
P+D +F + SAC+ + Q + H I+ S I V N+LIS+Y K GN+++A +
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARW 402
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF+ M + VS+N MI GYAQHG A+ L++ M+ + P+ ITF+ V+S+C H G
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK 462
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---- 407
V+EG+ YF++M + ++PE +HYSC++DLLGRAG LEEA FI MP P +V W
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Query: 408 -------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
AA ++++P A +V LAN+YA R W++ A VRK M+ K ++
Sbjct: 523 GACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRK 582
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
PGCSWIE+ + F AED S+ + E+ L+ ++ +MK +GYV
Sbjct: 583 KPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYV 628
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 21/315 (6%)
Query: 104 VFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGSTRN 150
+FD++ V LIS + D + + +VD LS + +C +
Sbjct: 96 LFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVD 155
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM-PVRNVVSWTAIIA 209
+ C ++ GF + V ++ +T YSK ++ +A VF M +R+ VSW ++I
Sbjct: 156 LI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIV 213
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
A+ Q + L LY+ M + + FT S+L+A T L GR H + I+ GF
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273
Query: 270 YIQVANSLISMYCKCGNVE---EAVYVFNNMHGKDIVSWNSMIAGYAQH-GLAVRAIDLF 325
V + LI Y KCG + ++ VF + D+V WN+MI+GY+ + L+ A+ F
Sbjct: 274 NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSF 333
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGK-VYFDSMAKHGLKPELDHYSCVVDLLGR 384
+M + +PD +F+ V S+C + + K ++ ++ H + + ++ L +
Sbjct: 334 RQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYK 393
Query: 385 AGLLEEARDFIKQMP 399
+G L++AR +MP
Sbjct: 394 SGNLQDARWVFDRMP 408
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 36/314 (11%)
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC---------------------RV 185
+ R++ G L +++ ++ Y+ + + LYSKC V
Sbjct: 20 AERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNV 79
Query: 186 IIDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
I+ AY ++F+E+P + VS+ +I+ +A + + L++ MR E +
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
FT + +++AC L + HC ++ GF SY V N+ ++ Y K G + EAV VF
Sbjct: 140 GFTLSGLIAACCDRVDL--IKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 296 NMHG-KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +D VSWNSMI Y QH +A+ L++EM+ + K D T V+++ +
Sbjct: 198 GMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK--QMPIYPNAVIWEAAES 412
G+ + + K G S ++D + G + D K Q + P+ V+W S
Sbjct: 258 GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMIS 317
Query: 413 RLLLEPECAATHVQ 426
+ E + V+
Sbjct: 318 GYSMNEELSEEAVK 331
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 10/161 (6%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF +L L G+S H ++ S ++N +++Y KCG + A F +
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
++ S+N ++ YA+ A LF+E+ +PD +++ +IS
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEI----PQPDTVSYNTLISGYADARETFAAM 125
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
V F M K G E+D ++ L G + D IKQ+
Sbjct: 126 VLFKRMRKLGF--EVDGFT----LSGLIAACCDRVDLIKQL 160
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 225/413 (54%), Gaps = 18/413 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D K + ++ + + D L A + G ++ G + ++ GF +++V S
Sbjct: 1118 DFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTS 1177
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++ +Y KC + A +VF E+P + V+WT +I+ + Q + L Y MR S ++P
Sbjct: 1178 GVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQP 1237
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+++TF +++ AC+ AL QGR H +++ V SL+ MY KCGN+E+A +F
Sbjct: 1238 DEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLF 1297
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ + I SWN+MI G AQHG A A+ F+ M + V PD +TF+GV+S+C H GLV
Sbjct: 1298 KRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVS 1357
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---- 409
E F SM K +G++PE++HYSC+VD L RAG +EEA I MP +A ++
Sbjct: 1358 EAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNA 1417
Query: 410 -------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AE L LEP +A +V L+N+YA W+ A R +M+ +K +P
Sbjct: 1418 CRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDP 1477
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
G SW+++ N V+ F A D+S+ I +++++ +++ GYVP+ VD
Sbjct: 1478 GFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVD 1530
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 11/284 (3%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGG----APYQCLAIRTGFIANVYVGSS 175
+ M L R+ L D +++ + +C S + GG A++ G + + +V ++
Sbjct: 1021 VGMFVHLLRDSLLPDQFTVASVLRACSS---LEGGYYLATQIHACAMKAGVVLDSFVSTA 1077
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +YSK + +A +F ++ SW AI+ + L LY +M+ S +
Sbjct: 1078 LIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSD 1137
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T + A G L QG+ H ++ GF + V + ++ MY KCG +E A VF+
Sbjct: 1138 QITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFS 1197
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ D V+W +MI+G ++G A+ + +M +V+PD TF ++ +C +E+
Sbjct: 1198 EIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQ 1257
Query: 356 GKVYFDSMAKHGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQ 397
G+ ++ K L D + + +VD+ + G +E+AR K+
Sbjct: 1258 GRQIHANIVK--LNCAFDPFVMTSLVDMYAKCGNIEDARGLFKR 1299
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 14/290 (4%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
D+ R+ D +T + G + +R+G V VG+ LI +Y K
Sbjct: 925 DMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAG 984
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFA----QEWQVDMCLELYRMMRNSMLEPNDFTFT 240
+ A VF +M +++SW +I+ +E V M + L +R+S+L P+ FT
Sbjct: 985 SVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHL---LRDSLL-PDQFTVA 1040
Query: 241 SILSACTG-SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+L AC+ G H ++ G V+ +LI +Y K G +EEA ++F N G
Sbjct: 1041 SVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDG 1100
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV--EEGK 357
D+ SWN+++ GY G +A+ L+ M + + D IT + + GGLV ++GK
Sbjct: 1101 FDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAA--GGLVGLKQGK 1158
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ K G +L S V+D+ + G +E AR ++P P+ V W
Sbjct: 1159 QIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAW 1207
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 94/182 (51%), Gaps = 3/182 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP--VRNVVSWTAIIAAFAQEWQVDM 219
+ +G + +V ++LIT+Y+KC + A K+F+ P R++V+W AI++A A
Sbjct: 683 LTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSH 742
Query: 220 -CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L+R++R S++ T + C S + S H +++G + VA +L+
Sbjct: 743 DGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALV 802
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
++Y K G + EA +F+ M +D+V WN M+ Y L A+ LF E + +PD +
Sbjct: 803 NIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDV 862
Query: 339 TF 340
T
Sbjct: 863 TL 864
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 3/194 (1%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+V+ W ++ F Q + ++ + M NS + + TF +L+ G L G+ H
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+R G + V N LI+MY K G+V A VF M+ D++SWN+MI+G GL
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCR--HGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
++ +F +++ + PD T V+ +C GG +++ +M K G+ + +
Sbjct: 1019 CSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAM-KAGVVLDSFVSTA 1077
Query: 378 VVDLLGRAGLLEEA 391
++D+ + G +EEA
Sbjct: 1078 LIDVYSKRGKMEEA 1091
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 37/243 (15%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
A++ G +V+V +L+ +Y+K +I +A +F+ M VR+VV W ++ A+ VD C
Sbjct: 786 AVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAY-----VDTC 840
Query: 221 LE-----LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
LE L+ + P+D T ++ R C+ + + A
Sbjct: 841 LEYEAMLLFSEFHRTGFRPDDVTLRTL------------SRVVKCKKNILELKQFKAYAT 888
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
L MY + G D++ WN ++ + Q G A A+D F +M+ RV
Sbjct: 889 KLF-MY--------------DDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVAC 933
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
D +TF+ +++ +E GK + + GL + +C++++ +AG + AR
Sbjct: 934 DGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVF 993
Query: 396 KQM 398
QM
Sbjct: 994 GQM 996
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 4/170 (2%)
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM--H 298
SIL + L G+ AH + + G V N+LI+MY KCG++ A +F+
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 299 GKDIVSWNSMIAGYAQHG-LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D+V+WN++++ A H + LF + + V T V C +
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K GL+ ++ +V++ + GL+ EAR M + + V+W
Sbjct: 781 SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR-DVVLW 829
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 243/429 (56%), Gaps = 29/429 (6%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
VE +S+ D+ + + + L++ ++ CG+ ++ G Q + + G N+ V +S
Sbjct: 222 VELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNS 281
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ---EWQVDM--------CLELY 224
+ LY + +A ++FE+M ++++W A+I+ +AQ + D+ L ++
Sbjct: 282 TMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIF 341
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
R ++ S+++P+ FTF+SILS C+ AL QG H QTI+ GF S + V ++L++MY KC
Sbjct: 342 RDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKC 401
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G +++A F M + V+W SMI+GY+QHG AI LFEEM V+P+ ITF+ ++
Sbjct: 402 GCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLL 461
Query: 345 SSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
S+C + GLVEE + YFD M K + ++P +DHY C++D+ R G +E+A FIK+ PN
Sbjct: 462 SACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPN 521
Query: 404 AVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKL 446
IW AA+ L L+P+ T++ L N+Y W ARVRKL
Sbjct: 522 EAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKL 581
Query: 447 MKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
MK + + SWI I + VY FRA D+++ + +E+ +L+ L+++ K +GY P + E
Sbjct: 582 MKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAE 641
Query: 507 KVDDASHKR 515
D ++
Sbjct: 642 LSDSEDDEK 650
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 142/274 (51%), Gaps = 12/274 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + +C ++ ++ G AI+ G + +G+SL +LY+K + A + F +P
Sbjct: 142 LGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP 201
Query: 198 VRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+NV++WT +I+A A++ + V++ + L+ M + PN+FT TS++S C L G+
Sbjct: 202 EKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGK 261
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ-- 314
+ ++G + + V NS + +Y + G +EA+ +F M I++WN+MI+GYAQ
Sbjct: 262 QVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIM 321
Query: 315 ---------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+A+ +F ++ + +KPD TF ++S C +E+G+ K
Sbjct: 322 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIK 381
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G ++ S +V++ + G +++A +MP
Sbjct: 382 SGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP 415
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 1/216 (0%)
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
R DA ++F+ MP RNVV+WTA++ + Q + LE++ M P+ +T + L
Sbjct: 87 RAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL 146
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
+AC S + G+ H I+ G S + NSL S+Y K G+++ A+ F + K+++
Sbjct: 147 NACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVI 206
Query: 304 SWNSMIAGYAQHGLAVR-AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
+W +MI+ A+ V + LF +M+ V P+ T V+S C + GK
Sbjct: 207 TWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAF 266
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
K G + L + + L R G +EA +QM
Sbjct: 267 SFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQM 302
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 222/383 (57%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + +C + G +R+GF ++ YV SSL+ YSKC I A KVF+E+
Sbjct: 95 MAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEIT 154
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN+V W+A+++ +A+ ++ L ++R M+ +EP++ + +LSAC GAL G+
Sbjct: 155 ERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKW 214
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + +++ +LI+MY KCG +E+A +F+ M KD +W+SMI G A HGL
Sbjct: 215 VHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGL 274
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A A+++F M + + KP+ +TF+G++S+C HGGLV +GK Y+ SM + G++P ++HY C
Sbjct: 275 AEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLELGIEPSMEHYGC 334
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPEC 420
+VDLL R GL++EA DF +P P+ VIW E +LL LEP
Sbjct: 335 MVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVAGKLLELEPWK 393
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
A ++ LANLYA V ++ + VRK+MK+ G+K PGC+ IE+ V+ F D S+
Sbjct: 394 AENYIILANLYASVSQLEKVSHVRKMMKENGIKALPGCTSIEVDGFVHNFVTGDWSHPEA 453
Query: 481 SEILPVLDFLVDQMKTLGYVPEV 503
EI L + ++ GY P V
Sbjct: 454 EEIKKTLRDVALKILISGYKPFV 476
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 117/212 (55%), Gaps = 2/212 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAII-AAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSAC 246
A K+F ++P + ++ ++I + + L++ M+ PN FT +L AC
Sbjct: 43 ARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAFVLKAC 102
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ AL +G+ H Q +R GF S V +SL++ Y KC + A VF+ + +++V W+
Sbjct: 103 SIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERNLVCWS 162
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+M++GYA+ G+ A+ +F EM ++PD ++ +GV+S+C G ++ GK + K
Sbjct: 163 AMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKR 222
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ +L+ + ++++ + G +E+AR+ +M
Sbjct: 223 MIHVDLELNTALINMYAKCGCIEKAREIFDEM 254
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 236/402 (58%), Gaps = 26/402 (6%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID-AYKVFEEMPVRN 200
+ +C R++ G ++ GF +++V ++++ +Y C ++ A K+F+EMP +
Sbjct: 116 LKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLD 175
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V+WTA+I +A+ Q + L+R M+ + + P+D T S+LSACT GAL G+
Sbjct: 176 PVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIES 235
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
+ ++++N+L+ M+ KCG+V++A+ +F NM + IVSW S+I G A HG +
Sbjct: 236 YIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLE 295
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVV 379
A+ LFEEM + P+ I F+G++S+C H GLVE G+ YF M + G+ P+++HY C+V
Sbjct: 296 AVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMV 355
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLLL-EPECAA 422
DLL RAGL+ EA +F+++MPI PN +IW E+ +L+ EP +
Sbjct: 356 DLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHES 415
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
+V L+N+Y + W++ +++R M KG++ PG + IE+ N ++ F D+S+ + +E
Sbjct: 416 NYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNE 475
Query: 483 ILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRTE 517
I+ +++ + +MK GY P ++ EE +DA + +E
Sbjct: 476 IIKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKEDALSRHSE 517
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 5/242 (2%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVF---EEMPVRNVVSWTAIIAAFAQEWQVD 218
I+ GF N V + + S I A + E+ V + ++ II A+A+ Q
Sbjct: 31 IKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYDAFLFSTIIRAYAESSQSK 90
Query: 219 M-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+ Y +M + PN + F +L AC G L G++ H ++ GF I V N++
Sbjct: 91 HNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTM 150
Query: 278 ISMYCKC-GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
+ MYC C G +E A +F+ M D V+W +MI GYA+ G + A+ LF +M V PD
Sbjct: 151 VHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPD 210
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+T + V+S+C G +E GK + K + ++ + +VD+ + G +++A +
Sbjct: 211 DVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFR 270
Query: 397 QM 398
M
Sbjct: 271 NM 272
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 219/387 (56%), Gaps = 18/387 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + +C + + G CL+++ G NVYV +LI +Y++C + A VF
Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVF 187
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ + VV + A+I +A+ + + L L+R M+ L+PN+ T S+LS+C G+L
Sbjct: 188 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD 247
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ H + F Y++V +LI M+ KCG++++AV +F M KD +W++MI YA
Sbjct: 248 LGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYA 307
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPEL 372
HG A +++ +FE M + V+PD ITFLG++++C H G VEEG+ YF M +K G+ P +
Sbjct: 308 NHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSI 367
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL- 415
HY +VDLL AG LE+A +FI ++PI P ++W E R+
Sbjct: 368 KHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L+ +V L+NLYA + W+ +RK+MKD+ PGCS IE+ NVV+ F + D
Sbjct: 428 LDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDG 487
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ +++ LD +V ++K GYVP+
Sbjct: 488 VKSATTKLHRALDEMVKELKLSGYVPD 514
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A ++F M DIV +NSM GY++ + LF E+++ + PD TF ++ +C
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 350 GGLVEEGK 357
+EEG+
Sbjct: 142 AKALEEGR 149
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 223/379 (58%), Gaps = 19/379 (5%)
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
++R G + IR+GF + +YV +SL+ LY+ C + AYKVF++MP +++V+W ++I
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
FA+ + + L LY M + ++P+ FT S+LSAC GAL G+ H I++G
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ +N L+ +Y +CG VEEA +F+ M K+ VSW S+I G A +G AI+LF+ M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 330 K-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGL 387
+ + P ITF+G++ +C H G+V+EG YF M ++ ++P ++H+ C+VDLL RAG
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 388 LEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANL 430
+++A ++IK MP+ PN VIW E A ++L LEP + +V L+N+
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
YA + W ++RK M G+K PG S +E+ N V+ F DKS+ + I L +
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Query: 491 VDQMKTLGYVPEVHEEKVD 509
++++ GYVP++ VD
Sbjct: 363 TGRLRSEGYVPQISNVYVD 381
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++++ +++ + +K D + + +++C + G I+ G N++ + L
Sbjct: 71 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 130
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM-LEPN 235
+ LY++C + +A +F+EM +N VSWT++I A +EL++ M ++ L P
Sbjct: 131 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 190
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY------------IQVANSLISMYCK 283
+ TF IL AC+ HC ++ GF + I+ ++ + +
Sbjct: 191 EITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 284 CGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHG 316
G V++A +M + ++V W +++ HG
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 226/395 (57%), Gaps = 20/395 (5%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H + D +FL+ + +CGS + G I+ G V +SL+T+Y+KC
Sbjct: 375 IHMGLMPDDITFLNL-LCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSN 433
Query: 186 IIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA+ VF+++ N+VSW AI++A +Q Q L+++M S +P++ T T+IL
Sbjct: 434 LHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILG 493
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
C +L G HC +++ G + V+N LI MY KCG ++ A YVF++ DIVS
Sbjct: 494 TCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVS 553
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W+S+I GYAQ GL A++LF M V+P+ +T+LGV+S+C H GLVEEG +++M
Sbjct: 554 WSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTME 613
Query: 365 -KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE--------------- 408
+ G+ P +H SC+VDLL RAG L EA +FIK+ P+ +W+
Sbjct: 614 IELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIA 673
Query: 409 --AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNV 466
AAE+ L L+P +A V L+N++A W + AR+R LMK G++ PG SWIE+ +
Sbjct: 674 ERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQ 733
Query: 467 VYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
++ F +ED S+ + I +L+ L QM GY P
Sbjct: 734 IHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGYDP 768
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 149/294 (50%), Gaps = 2/294 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E L + + L ++++ S + +C + R+++ G +++ ++ + + +
Sbjct: 62 EALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHI 121
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC + DA K F+ M +R+VVSWT +I+ ++Q Q + + +Y M S P+
Sbjct: 122 LNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQ 181
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF SI+ AC +G + G H I+ G+ ++ N+LISMY K G + A VF
Sbjct: 182 LTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTM 241
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV-KPDAITFLGVISSCRHGGLVEE 355
+ KD++SW SMI G+ Q G + A+ LF +M +Q V +P+ F V S+CR E
Sbjct: 242 ISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEF 301
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ AK GL + + D+ + G L A+ Q+ P+ V W A
Sbjct: 302 GRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIE-SPDLVSWNA 354
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 4/287 (1%)
Query: 125 DLHRERLKVDASFLSTAV-TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
D+ R+ + F+ +V ++C S G Q + + G NV+ G SL +Y+K
Sbjct: 272 DMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKF 331
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ A + F ++ ++VSW AIIAA A V+ + + M + L P+D TF ++L
Sbjct: 332 GFLPSAKRAFYQIESPDLVSWNAIIAALANS-DVNEAIYFFCQMIHMGLMPDDITFLNLL 390
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDI 302
AC L QG H I+MG V NSL++MY KC N+ +A VF ++ ++
Sbjct: 391 CACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNL 450
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
VSWN++++ +QH A LF+ M+ KPD IT ++ +C +E G
Sbjct: 451 VSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCF 510
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K GL ++ + ++D+ + GLL+ AR ++ P+ V W +
Sbjct: 511 SVKSGLVVDVSVSNRLIDMYAKCGLLKHAR-YVFDSTQNPDIVSWSS 556
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 243/429 (56%), Gaps = 29/429 (6%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
VE +S+ D+ + + + L++ ++ CG+ ++ G Q + + G N+ V +S
Sbjct: 262 VELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNS 321
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ---EWQVDM--------CLELY 224
+ LY + +A ++FE+M ++++W A+I+ +AQ + D+ L ++
Sbjct: 322 TMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIF 381
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
R ++ S+++P+ FTF+SILS C+ AL QG H QTI+ GF S + V ++L++MY KC
Sbjct: 382 RDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKC 441
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G +++A F M + V+W SMI+GY+QHG AI LFEEM V+P+ ITF+ ++
Sbjct: 442 GCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLL 501
Query: 345 SSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
S+C + GLVEE + YFD M K + ++P +DHY C++D+ R G +E+A FIK+ PN
Sbjct: 502 SACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPN 561
Query: 404 AVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKL 446
IW AA+ L L+P+ T++ L N+Y W ARVRKL
Sbjct: 562 EAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKL 621
Query: 447 MKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
MK + + SWI I + VY FRA D+++ + +E+ +L+ L+++ K +GY P + E
Sbjct: 622 MKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAE 681
Query: 507 KVDDASHKR 515
D ++
Sbjct: 682 LSDSEDDEK 690
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 142/274 (51%), Gaps = 12/274 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + +C ++ ++ G AI+ G + +G+SL +LY+K + A + F +P
Sbjct: 182 LGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP 241
Query: 198 VRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+NV++WT +I+A A++ + V++ + L+ M + PN+FT TS++S C L G+
Sbjct: 242 EKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGK 301
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ-- 314
+ ++G + + V NS + +Y + G +EA+ +F M I++WN+MI+GYAQ
Sbjct: 302 QVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIM 361
Query: 315 ---------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+A+ +F ++ + +KPD TF ++S C +E+G+ K
Sbjct: 362 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIK 421
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G ++ S +V++ + G +++A +MP
Sbjct: 422 SGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP 455
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 8/267 (2%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
S G+ R + G +TG A+++V +SL+ Y +C DA ++F+ MP RNVV+
Sbjct: 93 SLGAARAVHGHMA------KTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVT 146
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA++ + Q + LE++ M P+ +T + L+AC S + G+ H I
Sbjct: 147 WTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAI 206
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR-AI 322
+ G S + NSL S+Y K G+++ A+ F + K++++W +MI+ A+ V +
Sbjct: 207 KYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGM 266
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
LF +M+ V P+ T V+S C + GK K G + L + + L
Sbjct: 267 SLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLY 326
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEA 409
R G +EA +QM + + W A
Sbjct: 327 LRKGETDEAMRLFEQMED-ASIITWNA 352
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ +L C +G+LG R+ H + G + + VA SL++ Y +C +A +F+ M
Sbjct: 81 YVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMP 140
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++V+W +++ GY + +++F EM++ P T +++C V+ GK
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEP 418
K+G + + + L + G L+ A ++P N + W S +
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVITWTTMISACAEDE 259
Query: 419 ECAATHVQL 427
EC + L
Sbjct: 260 ECVELGMSL 268
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 233/426 (54%), Gaps = 32/426 (7%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
VDV KLI E ++ + + T C S ++I G +++ +VY+G
Sbjct: 209 VDVLKLII------SEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIG 262
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
SS+I +Y KC ++ F+ + RNVVSWT+IIAA+ Q + L L+ M +
Sbjct: 263 SSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIP 322
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN++T + ++ G AL G H + + G + V N+LI MY K G++ A V
Sbjct: 323 PNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSV 382
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+NM +I++WN++I G++ HGL A+ +F++MM +P+ +TF+GVI +C H LV
Sbjct: 383 FSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLV 442
Query: 354 EEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--- 409
+EG YF+ + K + P L+HY+C+V LL R+G L+EA +F++ I + V W
Sbjct: 443 DEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLN 502
Query: 410 --------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
AE L LEP T++ L+N++A VR WD +RKLM+++ +K
Sbjct: 503 ACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKE 562
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV--------HEEK 507
PG SW+EI NV + F +ED + + I + L+ +++ LGYVP++ E+K
Sbjct: 563 PGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQK 622
Query: 508 VDDASH 513
VD+ S+
Sbjct: 623 VDNLSY 628
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 120/237 (50%), Gaps = 3/237 (1%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSML 232
+SLI LY KC + A K+F+ MP RNVVSW+A++A + Q EL+ +M+ +
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN++ + +S+C S +G+ H ++ G + V N+LI +Y KC +V A+
Sbjct: 121 FPNEYVIATAISSCD-SQMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+ + G DI +N ++ G QH A+D+ + ++ + ++ + T++ + C
Sbjct: 180 ILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKD 239
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ GK M K + ++ S ++D+ G+ G + R F ++ N V W +
Sbjct: 240 ITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQ-SRNVVSWTS 295
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 131/274 (47%), Gaps = 6/274 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQC--LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
++TA++SC S + G QC A+++G + YV ++LI LYSKC + A ++
Sbjct: 127 IATAISSCDSQMYVEGK---QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYT 183
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+P ++ + ++ Q + +++ +++ + +E N+ T+ +I C + G
Sbjct: 184 VPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLG 243
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H Q ++ + + +S+I MY KCGNV F+ + +++VSW S+IA Y Q+
Sbjct: 244 KQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQN 303
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
A++LF +M + P+ T + +S + G K GLK +
Sbjct: 304 EFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVG 363
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++ + ++G + A+ M N + W A
Sbjct: 364 NALIIMYFKSGDILAAQSVFSNMTC-CNIITWNA 396
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 242 ILSACTGSGALGQGRSAHCQ-TIRMGFF--SYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+L + L GR+ H TI + S + NSLI++Y KC V A +F++M
Sbjct: 25 LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+++VSW++++AGY Q+G + +LF++M +K + P+ ISSC + +
Sbjct: 85 RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSC-------DSQ 137
Query: 358 VYFDSMAKHG--LKPELDHYSCVVDLL 382
+Y + HG LK L+ + V + L
Sbjct: 138 MYVEGKQCHGYALKSGLEFHQYVKNAL 164
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 233/402 (57%), Gaps = 26/402 (6%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID-AYKVFEEMPVRN 200
+ +C + G ++ GF +++V ++++ +YS C I+ A KVF+EMP +
Sbjct: 139 LKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSD 198
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V+W+A+I +A+ + + L+R M+ + + P++ T S+LSACT GAL G+
Sbjct: 199 SVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEA 258
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
R ++V+N+LI M+ KCG++ +A+ +F M+ K IVSW S+I G A HG
Sbjct: 259 YIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQE 318
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS-MAKHGLKPELDHYSCVV 379
A LFEEM V PD + F+G++S+C H GLVE G+ YF S M K+ L P+++HY C+V
Sbjct: 319 ATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMV 378
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES---------------RLLL--EPECAA 422
D+ R GL++EA +F++ MPI PN VI S +LL+ EP +
Sbjct: 379 DMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHES 438
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
+V L+N+YA W++ ++R++M+ KG+K PG + IEI N +Y F A DKS+ + E
Sbjct: 439 NYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKE 498
Query: 483 ILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRTE 517
I ++D + +MK GY P +++EE +D+ ++ +E
Sbjct: 499 IYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSE 540
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 2/197 (1%)
Query: 204 WTAIIAAFAQEWQV-DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
+ +I A+AQ D L LY +M + + PN FT+ +L AC G L G++ H
Sbjct: 99 FNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSV 158
Query: 263 IRMGFFSYIQVANSLISMY-CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ GF I V N+++ MY C G + A VF+ M D V+W++MI GYA+ G + A
Sbjct: 159 VKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 218
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ LF EM V PD IT + ++S+C G +E GK + +H + ++ + ++D+
Sbjct: 219 VALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDM 278
Query: 382 LGRAGLLEEARDFIKQM 398
+ G + +A + M
Sbjct: 279 FAKCGDISKALKLFRAM 295
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 220/401 (54%), Gaps = 19/401 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I M+ + + +K D + + +C + RN+R GA +R G +V +SL+ +
Sbjct: 194 IQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDM 253
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K ++ A +VF M RN VSW+A+I+ FAQ Q D L L+R M+ S ++P+
Sbjct: 254 YAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGAL 313
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S L AC+ G L GRS H +R F+ I + + I MY KCG++ A +FN +
Sbjct: 314 VSALLACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGSLASAQMLFNMISD 372
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D++ WN+MIA HG A+ LF+EM + ++PD TF ++S+ H GLVEEGK++
Sbjct: 373 RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLW 432
Query: 360 FDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
F M H + P HY C+VDLL R+GL+EEA D + M P IW A
Sbjct: 433 FGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNK 492
Query: 410 --------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
A++ L L+P+ ++NLYA + WD+ +VRKLMKD G K PGCS I
Sbjct: 493 KLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSI 552
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
EI + F ED+S+ + EI+ + L +M+ +GY+P
Sbjct: 553 EIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPR 593
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 148/283 (52%), Gaps = 12/283 (4%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
+ D++ + A+++C ++RGG + A G+ +V+V SSL+ LY++ + DA K
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF MP R+ V+W+ ++A F Q +++YR MR ++ ++ ++ ACT +
Sbjct: 165 VFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ G S H +R G + A SL+ MY K G ++ A VF M ++ VSW++MI+G
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISG 284
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+AQ+G + A+ LF M ++PD+ + + +C + G ++ G+ + HG
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR------SVHGFIVR 338
Query: 372 LDHYSCV-----VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++C+ +D+ + G L A+ + M + ++W A
Sbjct: 339 RFDFNCILGTAAIDMYSKCGSLASAQ-MLFNMISDRDLILWNA 380
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 241/433 (55%), Gaps = 33/433 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD++ + +V +IS + ++ + D L + + +CG +
Sbjct: 183 VFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGD 242
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G+ + + N +VGS+LI +Y KC + A +VF+ M ++VV+W A+I
Sbjct: 243 LGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITG 302
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+AQ D + L+ MR S + P+ T +LSAC GAL G+ G +
Sbjct: 303 YAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQND 362
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
I V+ +LI MY KCG++++A+ VF +M K+ VSWN+MI+ A HG ++ LF+ M K
Sbjct: 363 IYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSK 422
Query: 331 Q--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGL 387
+ V+P+ I+F+GV+S+C H GLV+EG+ FD M+ GL P+++H+SC+VDLL RAG
Sbjct: 423 EGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGH 482
Query: 388 LEEARDFIKQMPIYPNAVIWEA------------AESRLL-----LEPECAATHVQLANL 430
+ EA DFI++MP P+ V+ A R++ +EP + ++ + +
Sbjct: 483 VHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKI 542
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
+A ++ WD +AR+R LM+ +G+ PGCSWIEI N V+ F A D + ++ V++ L
Sbjct: 543 FANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLL 602
Query: 491 VDQMKTLGYVPEV 503
++MK GY P+V
Sbjct: 603 NEEMKVEGYGPKV 615
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 136/274 (49%), Gaps = 11/274 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN-VYVGSSLITLYSKCRVIIDAYKVFEEM 196
L + + C ST++++ I T I N ++ + L+ + + +A +F ++
Sbjct: 34 LLSLLKQCTSTKSLQ--------QIHTQMIINAIHKPNFLLHRFIDLKDFNNASLLFSQI 85
Query: 197 PVRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
P N ++ +I WQ ++ +E Y M++ + PN+FT+ + AC L G
Sbjct: 86 PYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHG 145
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ AH ++ G + V +SLI+MY +CG + A VF+ + KD+VSWNSMI+GY++
Sbjct: 146 QCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRM 205
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G A A+ LF EM +PD +T + ++ +C G + G + ++ +
Sbjct: 206 GYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVG 265
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S ++ + G+ G L AR +M + + V W A
Sbjct: 266 SALIGMYGKCGDLSSARRVFDRM-VKKDVVTWNA 298
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 243/429 (56%), Gaps = 29/429 (6%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
VE +S+ D+ + + + L++ ++ CG+ ++ G Q + + G N+ V +S
Sbjct: 262 VELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNS 321
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ---EWQVDM--------CLELY 224
+ LY + +A ++FE+M ++++W A+I+ +AQ + D+ L ++
Sbjct: 322 TMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIF 381
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
R ++ S+++P+ FTF+SILS C+ AL QG H QTI+ GF S + V ++L++MY KC
Sbjct: 382 RDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKC 441
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G +++A F M + V+W SMI+GY+QHG AI LFEEM V+P+ ITF+ ++
Sbjct: 442 GCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLL 501
Query: 345 SSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
S+C + GLVEE + YFD M K + ++P +DHY C++D+ R G +E+A FIK+ PN
Sbjct: 502 SACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPN 561
Query: 404 AVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKL 446
IW AA+ L L+P+ T++ L N+Y W ARVRKL
Sbjct: 562 EAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKL 621
Query: 447 MKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
MK + + SWI I + VY FRA D+++ + +E+ +L+ L+++ K +GY P + E
Sbjct: 622 MKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAE 681
Query: 507 KVDDASHKR 515
D ++
Sbjct: 682 LSDSEDDEK 690
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 142/274 (51%), Gaps = 12/274 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + +C ++ ++ G AI+ G + +G+SL +LY+K + A + F +P
Sbjct: 182 LGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP 241
Query: 198 VRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+NV++WT +I+A A++ + V++ L L+ M + PN+FT TS++S C L G+
Sbjct: 242 EKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGK 301
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ-- 314
+ ++G + + V NS + +Y + G +EA+ +F M I++WN+MI+GYAQ
Sbjct: 302 QVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIM 361
Query: 315 ---------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+A+ +F ++ + +KPD TF ++S C +E+G+ K
Sbjct: 362 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIK 421
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G ++ S +V++ + G +++A +MP
Sbjct: 422 SGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP 455
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 8/267 (2%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
S G+ R + G +TG A+++V +SL+ Y +C DA ++F+ MP RNVV+
Sbjct: 93 SLGAARAVHGHMA------KTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVT 146
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTA++ + Q + LE++ M P+ +T + L+AC S + G+ H I
Sbjct: 147 WTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAI 206
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR-AI 322
+ G S + NSL S+Y K G+++ A+ F + K++++W +MI+ A+ V +
Sbjct: 207 KYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGL 266
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
LF +M+ V P+ T V+S C + GK K G + L + + L
Sbjct: 267 SLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLY 326
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEA 409
R G +EA +QM + + W A
Sbjct: 327 LRKGETDEAMRLFEQMED-ASIITWNA 352
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ +L C G+LG R+ H + G + + VA SL++ Y +CG +A +F+ M
Sbjct: 81 YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP 140
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++V+W +++ GY + +++F EM++ P T +++C V+ GK
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEP 418
K+G + + + L + G L+ A ++P N + W S +
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVITWTTMISACAEDE 259
Query: 419 ECAATHVQL 427
EC + L
Sbjct: 260 ECVELGLSL 268
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 216/386 (55%), Gaps = 26/386 (6%)
Query: 146 GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
GS N RG +A NV ++L+ Y K + A ++F+ M R+VV+WT
Sbjct: 344 GSVENARGVMQQAVMAD-----LNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWT 398
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
A+I + Q D +EL+R+M S EPN +T ++LS C L G+ HC+ IR
Sbjct: 399 AMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRS 458
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYAQHGLAVRAIDL 324
V+NS+++MY + G++ A VF+ +H K+ V+W SMI AQHGL A+ L
Sbjct: 459 LQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGL 518
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLG 383
FEEM++ VKPD ITF+GV+S+C H G V+EGK YF + KHG+ PE+ HY+C+VDLL
Sbjct: 519 FEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLA 578
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQ 426
RAGL EA++FI+QMP+ P+A+ W AAE L ++P + +
Sbjct: 579 RAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSA 638
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
L+N+Y+ W+ AA++ K KDK +K G SW I N V+ F A+D + + +
Sbjct: 639 LSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRT 698
Query: 487 LDFLVDQMKTLGYVPEVHE--EKVDD 510
+ D +K G+VP++ VDD
Sbjct: 699 AAKMWDDIKKAGFVPDLQSVLHDVDD 724
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 32/261 (12%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV+ +SL++LY+K + DA VF EMP R+ VSWT ++ + + ++++ M
Sbjct: 95 NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
L P FT T++LS+C + A G GR H +++G S + VANS+++MY KCG+ E
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214
Query: 289 E-------------------------------AVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
A+ +F NM + IVSWN++IAGY Q+GL
Sbjct: 215 TARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGL 274
Query: 318 AVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+A+ F M+ + PD T V+S+C + G+V GK + + + +
Sbjct: 275 NAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTN 334
Query: 377 CVVDLLGRAGLLEEARDFIKQ 397
++ + ++G +E AR ++Q
Sbjct: 335 ALISMYAKSGSVENARGVMQQ 355
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 148/354 (41%), Gaps = 67/354 (18%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I M D+ + L L+ ++SC +T G ++ G + V V +S++ +
Sbjct: 147 IKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNM 206
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY--------------- 224
Y KC A VFE MP R+V SW A+++ A ++D+ L L+
Sbjct: 207 YGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVI 266
Query: 225 -----------------RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
RM+ S + P++FT TS+LSAC G + G+ H +R
Sbjct: 267 AGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRM 326
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYV---------------------------------F 294
QV N+LISMY K G+VE A V F
Sbjct: 327 PYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMF 386
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M +D+V+W +MI GY Q+G A++LF M++ +P++ T V+S C +E
Sbjct: 387 DVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLE 446
Query: 355 EGKVYFDSMAKHGLKPELDHYS-CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
GK A L+ + S +V + R+G L AR ++ V W
Sbjct: 447 YGK-QIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTW 499
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
NSL+S+Y K G + +A VF M +D VSW M+ G + G AI +F +M+ +
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
P T V+SSC G+ + K GL + + V+++ G+ G E AR
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219
Query: 395 IKQMP 399
++MP
Sbjct: 220 FERMP 224
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 222/389 (57%), Gaps = 18/389 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + ++ E + V++ L + +C S N+ G+ C ++ GF ++V V + IT+
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + A K+F+EMPV+ ++SW A+++ +AQ LELYR M + + P+ T
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+LS+C GA G + GF S + N+LI+MY +CGN+ +A VF+ M
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 307
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+ +VSW ++I GY HG A+ LF+EM++ ++PD F+ V+S+C H GL ++G Y
Sbjct: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 367
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F M + + L+P +HYSC+VDLLGRAG L+EA+ I+ MPI P+ +W
Sbjct: 368 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 427
Query: 408 -----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
E A R++ LEPE +V L+N+Y+ R+R +MK+K LK +PGCS++
Sbjct: 428 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 487
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
E+ V+ F D+++ + EI VL+ L
Sbjct: 488 ELKGRVHPFIVGDRNHLQSDEIYRVLEEL 516
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 2/282 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S++ + R + +A A+ SC + G+ + + G + +V + LI++
Sbjct: 25 LSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISM 84
Query: 180 YSKCRVIIDAYKVFEE--MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
Y K ++ +A KVFEE + V + A+++ + + + L+R M + N
Sbjct: 85 YCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSV 144
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T ++ AC L G S HC T++ GF S + V N I+MY KCG+V A +F+ M
Sbjct: 145 TLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEM 204
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
K ++SWN+M++GYAQ+GLA ++L+ M V PD +T +GV+SSC + G G
Sbjct: 205 PVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGH 264
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
M G + ++++ R G L +A+ MP
Sbjct: 265 EVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 306
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 3/211 (1%)
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W + A+ Q L LY M PN FTF L +C G H Q
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFN-NMHGKDI-VSWNSMIAGYAQHGLAVRA 321
++G V LISMYCK V+ A VF N H + + V +N++++GY + A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ LF +M ++ V +++T LG+I +C +E G S K+G ++ +C + +
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+ G + A+ +MP+ + W A S
Sbjct: 188 YMKCGSVNYAQKLFDEMPV-KGLISWNAMVS 217
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 215/397 (54%), Gaps = 26/397 (6%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H+ + D+S + + + G + I+ GFI +VY ++L+ LY C
Sbjct: 80 MHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLS 139
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I DA ++F+EMP RN V+W A+I + + ++ +R M +P++ T +LSA
Sbjct: 140 ISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSA 199
Query: 246 CTGSGALGQGRSAH----CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
C+ GA QG+ H +R+ F V +LI MY KCG V E VF + K+
Sbjct: 200 CSHLGAFNQGKWIHEFIYHNRLRLNVF----VGTALIDMYAKCGAVYEVEKVFEEIREKN 255
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+ +WN +I+GYA +G A+ F M+ + KPD +TFLGV+ +C H GLV EG+ F
Sbjct: 256 VYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFM 315
Query: 362 SMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAE--------- 411
SM + GL+P ++HY C+VDLLGRAGLLEEA + I+ M I P+ +IW A
Sbjct: 316 SMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNT 375
Query: 412 -------SRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
RL+ LEP +V L+N+Y+ R W + ++R +M +G++ PGCS IEI
Sbjct: 376 KLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSIEI 435
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
NVVY F A + I LD L+ ++K GYV
Sbjct: 436 NNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYV 472
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L ++ +M + P+ TF ++L A G G+ H I+MGF + + +L+ +
Sbjct: 74 LYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHL 133
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
YC C ++ +A +F+ M ++ V+WN++I GY + V+AID F M+ +P T
Sbjct: 134 YCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTV 193
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ V+S+C H G +GK + + + L+ + + ++D+ + G + E +++
Sbjct: 194 VVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEI 251
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 231/399 (57%), Gaps = 18/399 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE +S+ + +C + + AI+ NV+V ++L+ +Y+KC +
Sbjct: 156 MQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGL 215
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA VFE MP R+VV+W+++ A + Q + L L+R + L+ + F +S++ A
Sbjct: 216 MKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICA 275
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G A+ +G+ + + GF S I VA+SLI MY KCG +EE+ VF ++ +++V W
Sbjct: 276 CAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLW 335
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI+G ++H ++ + LFE+M + + P+ +TF+ V+S+C H GLV++G+ YFD M K
Sbjct: 336 NAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTK 395
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------E 408
H L P + HYSC+VD L RAG + EA D I ++P +A +W E
Sbjct: 396 EHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAE 455
Query: 409 AAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
A +L +EP + ++ L+N+YA WD+ A++RKL+K+ +K G SWIEI + V
Sbjct: 456 VAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKV 515
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
+ F ++++ ++ EI L+ ++D+++ LGY E +
Sbjct: 516 HLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHD 554
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 1/279 (0%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
SF+ + C + + G + G ++ + LI +YSKC + A +VF+E
Sbjct: 65 SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDE 124
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP R++VSW +I + Q + + L+L M+ ++FT +S+L AC AL +
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H I+ + VA +L+ +Y KCG +++AV VF +M + +V+W+SM AGY Q+
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQN 244
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
+ +A+ LF + + +K D VI +C + EGK ++K G +
Sbjct: 245 EMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVA 304
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
S ++D+ + G +EE+ + + N V+W A S L
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGL 342
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 223/416 (53%), Gaps = 34/416 (8%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
++ + ++ E +K D + V+SC ++ G C G V + ++L+ +
Sbjct: 165 LNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDM 224
Query: 180 YSKCRVIIDAYKVFE----------------EMPVRNVVSWTAIIAAFAQEWQVDMCLEL 223
Y KC + A K+F+ EMP ++VV W A+I + + L L
Sbjct: 225 YMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALAL 284
Query: 224 YRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
+ M+ + P++ T S LSAC+ GAL G H + + + +LI MY K
Sbjct: 285 FNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAK 344
Query: 284 CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
CG + +A+ VF + G++ ++W ++I+G A HG A AI F EM+ V PD +TFLG+
Sbjct: 345 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 404
Query: 344 ISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
+S+C HGGLVEEG+ YF M +K L P+L HYSC+VDLLGRAGLLEEA + IK MPI
Sbjct: 405 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 464
Query: 403 NAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRK 445
+AV+W E A S+LL ++P + +V LAN+Y W +A + RK
Sbjct: 465 DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRK 524
Query: 446 LMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
LM+ +G++ PGCS IE+ +VY F DKS+ + +I L L Q++ + P
Sbjct: 525 LMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELVECTP 580
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 17/289 (5%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C IR G+ + GF ++++V +++I L C + A K+F++ VR++VS
Sbjct: 88 ACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVS 147
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W ++I + + L YR M+ ++P++ T ++S+C L GR +HC
Sbjct: 148 WNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIE 207
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEA----------------VYVFNNMHGKDIVSWNS 307
G + +AN+L+ MY KCGN+E A +F+ M KD+V WN+
Sbjct: 208 ENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNA 267
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI GY A+ LF EM + PD +T + +S+C G ++ G + KH
Sbjct: 268 MIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHE 327
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
L + + ++D+ + G + +A +++P N++ W A S L L
Sbjct: 328 LSLNVALGTALIDMYAKCGKITKAIQVFQELP-GRNSLTWTAIISGLAL 375
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 162 IRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
+ TG I + + S LI S+ R + + N SW I F
Sbjct: 2 VLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPRE 61
Query: 220 CLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+ LY R+++ +P+++T+ + AC + G + +GF S I V+N++I
Sbjct: 62 AVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVI 121
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
+ CG+++ A +F+ +D+VSWNSMI GY + G A A++ + EM + +KPD +
Sbjct: 122 HLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEV 181
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
T +GV+SSC ++ G+ + ++GLK + + ++D+ + G LE AR M
Sbjct: 182 TMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSM 241
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 215/397 (54%), Gaps = 26/397 (6%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H+ + D+S + + + G + I+ GFI +VY ++L+ LY C
Sbjct: 80 MHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLS 139
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I DA ++F+EMP RN V+W A+I + + ++ +R M +P++ T +LSA
Sbjct: 140 ISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSA 199
Query: 246 CTGSGALGQGRSAH----CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
C+ GA QG+ H +R+ F V +LI MY KCG V E VF + K+
Sbjct: 200 CSHLGAFNQGKWIHEFIYHNRLRLNVF----VGTALIDMYAKCGAVYEVEKVFEEIREKN 255
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+ +WN +I+GYA +G A+ F M+ + KPD +TFLGV+ +C H GLV EG+ F
Sbjct: 256 VYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFM 315
Query: 362 SMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAE--------- 411
SM + GL+P ++HY C+VDLLGRAGLLEEA + I+ M I P+ +IW A
Sbjct: 316 SMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNT 375
Query: 412 -------SRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
RL+ LEP +V L+N+Y+ R W + ++R +M +G++ PGCS IEI
Sbjct: 376 KLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSIEI 435
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
NVVY F A + I LD L+ ++K GYV
Sbjct: 436 NNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYV 472
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L ++ +M + P+ TF ++L A G G+ H I+MGF + + +L+ +
Sbjct: 74 LYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHL 133
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
YC C ++ +A +F+ M ++ V+WN++I GY + V+AID F M+ +P T
Sbjct: 134 YCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTV 193
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ V+S+C H G +GK + + + L+ + + ++D+ + G + E +++
Sbjct: 194 VVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEI 251
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 222/389 (57%), Gaps = 18/389 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + ++ E + V++ L + +C S N+ G+ C ++ GF ++V V + IT+
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + A K+F+EMPV+ ++SW A+++ +AQ LELYR M + + P+ T
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+LS+C GA G + GF S + N+LI+MY +CGN+ +A VF+ M
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 316
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+ +VSW ++I GY HG A+ LF+EM++ ++PD F+ V+S+C H GL ++G Y
Sbjct: 317 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 376
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F M + + L+P +HYSC+VDLLGRAG L+EA+ I+ MPI P+ +W
Sbjct: 377 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 436
Query: 408 -----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
E A R++ LEPE +V L+N+Y+ R+R +MK+K LK +PGCS++
Sbjct: 437 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 496
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
E+ V+ F D+++ + EI VL+ L
Sbjct: 497 ELKGRVHPFIVGDRNHLQSDEIYRVLEEL 525
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 140/282 (49%), Gaps = 2/282 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S++ + R + +A A+ SC + G+ + + G + +V + LI++
Sbjct: 34 LSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISM 93
Query: 180 YSKCRVIIDAYKVFEE--MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
Y K ++ +A KVFEE + V + A+++ + + + L+R M + N
Sbjct: 94 YCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSV 153
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T ++ AC L G S HC T++ GF S + V N I+MY KCG+V A +F+ M
Sbjct: 154 TLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEM 213
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
K ++SWN+M++GYAQ+GLA ++L+ M V PD +T +GV+SSC + G G
Sbjct: 214 PVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGH 273
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ G + ++++ R G L +A+ MP
Sbjct: 274 EVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 315
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 3/211 (1%)
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W + A+ Q L LY M PN FTF L +C G H Q
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFN-NMHGKDI-VSWNSMIAGYAQHGLAVRA 321
++G V LISMYCK V+ A VF N H + + V +N++++GY + A
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ LF +M ++ V +++T LG+I +C +E G S K+G ++ +C + +
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+ G + A+ +MP+ + W A S
Sbjct: 197 YMKCGSVNYAQKLFDEMPV-KGLISWNAMVS 226
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 200/334 (59%), Gaps = 21/334 (6%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACT 247
A K+F EMP +NV+SWT +I QE + + L+++ RM+ + +PN TF S+L AC+
Sbjct: 268 ARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACS 327
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN--MHGKDIVSW 305
LG+G+ H + + V ++LI+MY KCG + A +F++ +D+VSW
Sbjct: 328 NLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSW 387
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N +IA YA HG AI+ F+EM K KPD +T++G++S+C H GLVEEG YFD + K
Sbjct: 388 NGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK 447
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------- 407
+ DHY+C+VDL GRAG L+EA FI+++ P+A +W
Sbjct: 448 DRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGK 507
Query: 408 EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
+AA+ L +EPE A T++ L+N+YA W +AARVR MKDKGLK PGCSWIE+ N V
Sbjct: 508 QAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRV 567
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
+ F DKS+++ I +L L +MK GY P
Sbjct: 568 HVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEP 601
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 18/212 (8%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV ++++ Y + I DA K+F EMP +NVVSW +I +AQ ++D + L+
Sbjct: 129 NVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE--- 185
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
M E N ++ +++S G + + R + S+ + L+ +
Sbjct: 186 -KMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLL---------D 235
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA+ +F M +D+ SWN+MI G Q+G RA LF EM K+ V I++ +I+ C
Sbjct: 236 EALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNV----ISWTTMITGCV 291
Query: 349 HGGLVEEG-KVYFDSMAKHGLKPELDHYSCVV 379
G EE K++ ++ +G KP + V+
Sbjct: 292 QEGESEEALKIFSRMLSTNGAKPNQGTFVSVL 323
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 51/232 (21%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
NV + +IT SK I++A ++F+EM +V++WT +I+ + + M E R+
Sbjct: 65 GNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYI---KCGMIEEARRLF 121
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ N T+T+++ Y + +
Sbjct: 122 DRVDAKKNVVTWTAMVGG-----------------------------------YIRSNKI 146
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+A +FN M K++VSWN+MI GYAQ+G A+ LFE+M ++ V +++ V+S
Sbjct: 147 SDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV----VSWNTVMSML 202
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G +EE + FD M PE D S + AGLL+EA D ++MP
Sbjct: 203 AQCGRIEEARRLFDRM------PERDVISWTAMI---AGLLDEALDLFERMP 245
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLKVDASFLSTA---------VTSCGSTRNIR 152
+F+++ V+ +I+ + E LK+ + LST V+ G+ N+
Sbjct: 271 LFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLA 330
Query: 153 G---GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE--MPVRNVVSWTAI 207
G G + +T + + +V S+LI +YSKC + A K+F++ R++VSW I
Sbjct: 331 GLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGI 390
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR-MG 266
IAA+A + ++ MR S +P+D T+ +LSAC+ +G + +G + ++
Sbjct: 391 IAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRS 450
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYAQH 315
L+ + + G ++EA + K W +++AG H
Sbjct: 451 ILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVH 500
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 256 RSAHCQTIRMGFFSYIQVA--NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
R+A R F VA N +I+ K G + EA +F+ M D+++W ++I+GY
Sbjct: 50 RTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYI 109
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ G+ A LF+ + K + +T+ ++ + + + F+ M +
Sbjct: 110 KCGMIEEARRLFDRV---DAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVV---- 162
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
++ ++D + G ++ A ++MP N V W S L
Sbjct: 163 SWNTMIDGYAQNGRIDSAMYLFEKMP-ERNVVSWNTVMSML 202
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 218/389 (56%), Gaps = 50/389 (12%)
Query: 164 TGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI---------------- 207
+G + NV VG+++I++Y KC + DA FEE+ +N V+W A+
Sbjct: 194 SGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALEL 253
Query: 208 ---------------IAAFAQEWQVDMCLELYRMMRNSM-LEPNDFTFTSILSACTGSGA 251
IAA+AQ + L+LYR M ++ L P TF +++ C A
Sbjct: 254 FREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSA 313
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L QGR+ H + F + + V+N+L+ MY KCG ++EA+ VF++M KD +SWN++I+
Sbjct: 314 LKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISS 373
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKP 370
YA HG + +A+ L++EM Q VKP +TF+G++S+C HGGLV +G YF M H +KP
Sbjct: 374 YAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKP 433
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESR 413
+ H+ C++DLLGR G L EA +K MPI NAV W AA+
Sbjct: 434 SVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQV 493
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
+ P + +V L+N+YA W ++RK+M +G+K +PG SWIEI +VV+ F +
Sbjct: 494 VDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSG 553
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
D S+ + EI L +V++MK LGYVP+
Sbjct: 554 DSSHPQGEEIYVELGKMVEEMKGLGYVPD 582
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 121/269 (44%), Gaps = 39/269 (14%)
Query: 166 FIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
F+AN+ LI +Y KC + A ++FE MP RNV +WT +AAF+ L +R
Sbjct: 98 FLANL-----LIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFR 152
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGA--LGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
M S P+ TF+ IL+A GA + QGR H G + V ++ISMY K
Sbjct: 153 RMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGK 212
Query: 284 CGNVE-------------------------------EAVYVFNNMHGKDIVSWNSMIAGY 312
CG ++ EA+ +F MH D V WN+MIA Y
Sbjct: 213 CGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAY 272
Query: 313 AQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
AQHG +A+DL+ M + P TF+ VI C +++G+ +
Sbjct: 273 AQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDAN 332
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
L + +V + G+ G L+EA D M +
Sbjct: 333 LLVSNALVHMYGKCGCLDEALDVFHSMKL 361
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
T + C ++ G T F AN+ V ++L+ +Y KC + +A VF M ++
Sbjct: 303 TVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLK 362
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+ +SW II+++A D L LY+ M ++P + TF +LSAC+ G + G
Sbjct: 363 DEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADG---- 418
Query: 260 CQTIRMGFFSYIQVANS----------LISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSM 308
+ +F +Q + +I + + G + EA V +M + V W S+
Sbjct: 419 -----LDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSL 473
Query: 309 IAGYAQHG---LAVRAID 323
+ HG VRA D
Sbjct: 474 LGACKTHGDLKRGVRAAD 491
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 242/486 (49%), Gaps = 64/486 (13%)
Query: 75 FLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH----------- 123
L + +HL + N +T S + VF+ + + +V LIS++
Sbjct: 31 LLCSKRQHLACKLLN-TYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFS 89
Query: 124 --HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
L L+ D+ + AV++CG +++ G + R ++ VG++LI +YS
Sbjct: 90 IFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYS 149
Query: 182 -------------------------------KCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
KC I A ++F+EMP+RN VSWTA+I
Sbjct: 150 RSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITG 209
Query: 211 FAQEWQVDMCLELYRMMRNSMLE-PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ Q LEL++ MR + P T ++LS C GA G S H +
Sbjct: 210 YVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDL 269
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ V N+L+ MY K G + A+ +F M +D+ SW +MI+G A HG A++ F +M
Sbjct: 270 DVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMS 329
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLL 388
K V P+ +T L V+S+C H GLV EG+ F M + HG+KP++ HY C+VDLLGRAGLL
Sbjct: 330 KSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLL 389
Query: 389 EEARDFIKQMPIYPNAVIWEAAESRLL-----------------LEPECAATHVQLANLY 431
EA++ I+ MPI P++VIW + S L LEP+ ++ L N+Y
Sbjct: 390 REAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIY 449
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
W+ A + RK M+D+ +K PGCSW+E+ VV+ F AED + +++ VL+ +
Sbjct: 450 CSASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAIT 509
Query: 492 DQMKTL 497
+QMK L
Sbjct: 510 EQMKDL 515
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ--VANSLISMYCKCGNVEEAVY 292
N TF +L C G+L + + H + + +G + +A L++ Y + G+ +A
Sbjct: 2 NTQTFYFLLQKC---GSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 58
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VFN++ DIVSW +I+ Y +A +F + ++PD+ +G +S+C H
Sbjct: 59 VFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKD 118
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ G++ + + L + + ++D+ R+G +E A K M I
Sbjct: 119 LSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEI 166
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 228/405 (56%), Gaps = 21/405 (5%)
Query: 127 HRERLKVDASFLST--AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
H +D ++T + +C I+ G AIR+ + V ++LIT+YS+C+
Sbjct: 320 HMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCK 379
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ AY +F+ +N+++W ++++ + + + L+R M S +EPN T SIL
Sbjct: 380 YLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILP 439
Query: 245 ACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
C L G+ HC + R GF Y+ + NSL+ MY + G V EA +F+++ +D V
Sbjct: 440 LCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEV 499
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
++ S+IAGY G A+ LF+EM K+ +KPD +T + V+S+C H GLV EG F+ M
Sbjct: 500 TYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELM 559
Query: 364 -AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-------------- 408
+ +G+ P L+H++C+VDL GRAGLL +A++ I +MP P++ +W
Sbjct: 560 PSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEI 619
Query: 409 ---AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
AAE L + PE + +V +AN+YA CW + A+VR M+D G++ PGC+W+++ +
Sbjct: 620 GEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVDVGS 679
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
+ F +D S ++++ P+L+ L + MK YV + + VDD
Sbjct: 680 GFFPFLVDDTSKPHVNKLYPLLEGLTELMKDAEYVGKENVGSVDD 724
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 139/309 (44%), Gaps = 36/309 (11%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S + + + ++ D + + +CG +I G + N++V +SL+++
Sbjct: 179 LSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSM 238
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K + A +FE M R+ VSW +I+ +A + EL+ MR +E N T+
Sbjct: 239 YAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITW 298
Query: 240 TSI-----------------------------------LSACTGSGALGQGRSAHCQTIR 264
+I L AC+ GA+ GR H IR
Sbjct: 299 NTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIR 358
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
+ V N+LI+MY +C + A +F + K+I++WNSM++GY + A L
Sbjct: 359 SFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFL 418
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLG 383
F EM+ ++P+ +T ++ C ++ GK + + + G K L ++ +VD+
Sbjct: 419 FREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYA 478
Query: 384 RAGLLEEAR 392
R+G + EA+
Sbjct: 479 RSGKVLEAK 487
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+++ G L I GF + + L+T Y+ ++ DA+ + E + + + W +I
Sbjct: 107 KSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLI 166
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+++ + L Y+ M + + P+ FT+ S+L AC + G+ H
Sbjct: 167 SSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLG 226
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
+ V NSL+SMY K G + A +F NM +D VSWN+MI+GYA G+ A +LF +M
Sbjct: 227 WNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKM 286
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ ++ + IT+ + C G EE M +G+ ++D + ++ L
Sbjct: 287 RVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGI--DMDSVATIIGL 337
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%)
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+L QG+ H I +GF + + L++ Y + +A + N + + WN +I+
Sbjct: 108 SLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLIS 167
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
Y ++GL A+ +++M + ++PD T+ V+ +C + GK S+ L
Sbjct: 168 SYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGW 227
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L ++ +V + + G L AR + M
Sbjct: 228 NLFVHNSLVSMYAKTGELSTARCLFENM 255
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 200/350 (57%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV +++IT Y++ I A F+ MP R+ +SW AIIA +AQ + L L+ M+
Sbjct: 327 NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMK 386
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N TFTS LS C AL G+ H + ++ G S V N+L+ MYCKCGN++
Sbjct: 387 RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNID 446
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A VF + K++VSWN+MIAGYA+HG A+ LFE M K + PD +T +GV+S+C
Sbjct: 447 DAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACS 506
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV++G YF SM + +G+ HY+C++DLLGRAG L++A++ +K MP P+A W
Sbjct: 507 HTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATW 566
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
+AA+ +EP+ + +V L+NLYA W R+R M+D+
Sbjct: 567 GALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDR 626
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G+K PG SW+E+ N ++ F D + I L+ L +MK GYV
Sbjct: 627 GVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYV 676
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 105/200 (52%), Gaps = 16/200 (8%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++I+ Y++ +++A ++FEE PVR+V +WTA+++ + Q +D ++ + M E
Sbjct: 239 NTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVF----DGMPE 294
Query: 234 PNDFTFTSILSACTGSGALGQGR----SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
N ++ +I++ + Q R + CQ + N++I+ Y + G++ +
Sbjct: 295 KNSVSWNAIIAGYVQCKRMDQARELFEAMPCQN--------VSSWNTMITGYAQNGDIAQ 346
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A F+ M +D +SW ++IAGYAQ G A+ LF EM + + + TF +S+C
Sbjct: 347 ARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAE 406
Query: 350 GGLVEEGKVYFDSMAKHGLK 369
+E GK + K GL+
Sbjct: 407 IAALELGKQVHGRVVKAGLE 426
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 5/217 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + ++ R+ +++ S ++ +++C + G ++ G + YVG++L
Sbjct: 376 EEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNAL 435
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC I DAY VFE + + VVSW +IA +A+ L L+ M+ + + P+D
Sbjct: 436 LVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDD 495
Query: 237 FTFTSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T +LSAC+ +G + +G + T G + + +I + + G +++A +
Sbjct: 496 VTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMK 555
Query: 296 NM-HGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEM 328
NM D +W +++ HG L +A + EM
Sbjct: 556 NMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 592
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y K ++DA +F+ MP R+ VSW +I+ +AQ ++ LE R+ S + + FT+
Sbjct: 214 YVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGEL---LEAQRLFEESPVR-DVFTW 269
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
T+++S +G L + R S+ N++I+ Y +C +++A +F M
Sbjct: 270 TAMVSGYVQNGMLDEARRVFDGMPEKNSVSW----NAIIAGYVQCKRMDQARELFEAMPC 325
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+++ SWN+MI GYAQ+G +A + F+ M ++ D+I++ +I+ G EE
Sbjct: 326 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQR----DSISWAAIIAGYAQSGYGEEALHL 381
Query: 360 FDSMAKHG 367
F M + G
Sbjct: 382 FVEMKRDG 389
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 20/210 (9%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F++MP R+VVSW A+++ +AQ V E++ + M N ++ +L+A +G
Sbjct: 133 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIF----DEMPCKNSISWNGMLAAYVQNGR 188
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ R S+ N ++ Y K + +A +F+ M +D VSWN+MI+G
Sbjct: 189 IEDARRLFESKADWELISW----NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISG 244
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
YAQ+G + A LFEE + D T+ ++S G+++E + FD M PE
Sbjct: 245 YAQNGELLEAQRLFEESPVR----DVFTWTAMVSGYVQNGMLDEARRVFDGM------PE 294
Query: 372 LDHYSCVVDLLG--RAGLLEEARDFIKQMP 399
+ S + G + +++AR+ + MP
Sbjct: 295 KNSVSWNAIIAGYVQCKRMDQARELFEAMP 324
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 43/254 (16%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY--------- 224
+++++ Y++ + +A ++F+EMP +N +SW ++AA+ Q +++ L+
Sbjct: 146 NAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELI 205
Query: 225 ------------------RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
R + + M E ++ ++ +++S +G L + + ++
Sbjct: 206 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRD 265
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
F++ +++S Y + G ++EA VF+ M K+ VSWN++IAGY Q +A +LFE
Sbjct: 266 VFTW----TAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFE 321
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA- 385
M Q V ++ +I+ G + + + +FD M P+ D S + G A
Sbjct: 322 AMPCQNVS----SWNTMITGYAQNGDIAQARNFFDRM------PQRDSISWAAIIAGYAQ 371
Query: 386 -GLLEEARDFIKQM 398
G EEA +M
Sbjct: 372 SGYGEEALHLFVEM 385
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
++V W I + Q D L L+ NSM + ++ +++S C + R
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLF----NSMPRRSSISWNAMISGCLSNDKFYLARQLF 103
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+ S+ N +IS + N+ A +F+ M +D+VSWN+M++GYAQ+G
Sbjct: 104 EKMPTRDLVSW----NVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVK 159
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A ++F+EM + ++I++ G++++ G +E+ + F+S A EL ++C++
Sbjct: 160 EAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDARRLFESKADW----ELISWNCMM 211
Query: 380 DLLGRAGLLEEARDFIKQMP----IYPNAVIWEAAESRLLLEPE 419
+ L +AR +MP + N +I A++ LLE +
Sbjct: 212 GGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQ 255
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 249/473 (52%), Gaps = 34/473 (7%)
Query: 62 STKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS 121
ST T +HL +I+ L+ + S + + + + VF Q+ VV +I+
Sbjct: 290 STATLIHLYVIKHGLEFEL--FVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIA 347
Query: 122 MHHD-------------LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA 168
+ + L+ D L + + +R+ + +R G++
Sbjct: 348 AYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLM 407
Query: 169 N-VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
V +G++++ +Y+K VI A+KVF +PV++VVSW +I+ + Q +E+YRMM
Sbjct: 408 EAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMM 467
Query: 228 RNSM-LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
++ N T+ SIL+A GAL QG H I+ + V LI +Y KCG
Sbjct: 468 EECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGR 527
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+ +A+ +F + + V WN++I+ + HG +A+ LF EM + VKPD +TF+ ++S+
Sbjct: 528 LVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSA 587
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
C H GLV+EGK +F M ++G+KP L HY C+VDLLGRAG LE A DFIK MP++P+A I
Sbjct: 588 CSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASI 647
Query: 407 WEA----------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
W A A RL ++ E +V L+N+YA V W+ +VR L ++
Sbjct: 648 WGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARE 707
Query: 450 KGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+GLK PG S IE+ V F ++S+ + EI L L +MK+LGY+P+
Sbjct: 708 RGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPD 760
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 150/329 (45%), Gaps = 39/329 (11%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G C + GF +V+V +SLI +YS+ + A +F++MP R++ SW A+I+ Q
Sbjct: 191 GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQ 250
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
L++ MR + + T SIL C G + H I+ G + V
Sbjct: 251 NGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFV 310
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+N+LI+MY K GN+ +A VF M +D+VSWNS+IA Y Q+ V A F +M +
Sbjct: 311 SNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGL 370
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG-------LKPELDHYSCVVDLLGRAG 386
+PD +T + + S + + + Y +S + HG L + + V+D+ + G
Sbjct: 371 EPDLLTLVSLAS------IAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLG 424
Query: 387 LLEEARDFIKQMPIYPNAVIW--------------EAAESRLLLEPEC------AATHVQ 426
+++ A +P+ + V W EA E ++E EC T V
Sbjct: 425 VIDSAHKVFNLIPV-KDVVSWNTLISGYTQNGLASEAIEVYRMME-ECREIKLNQGTWVS 482
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ YA V Q R+ + +KTN
Sbjct: 483 ILAAYAHVGALQQGMRIHGHL----IKTN 507
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 130/242 (53%), Gaps = 4/242 (1%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
L + +G I + ++ L+ LY+ + + F+++ ++V +W ++I+A+ +
Sbjct: 96 HALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHF 155
Query: 218 DMCLE-LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
++ Y+++ + + + +TF +L AC L GR HC ++GF + VA S
Sbjct: 156 REAIDCFYQLLLVTKFQADFYTFPPVLKACQ---TLVDGRKIHCWVFKLGFQWDVFVAAS 212
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI MY + G V A +F++M +D+ SWN+MI+G Q+G A +A+D+ +EM + + D
Sbjct: 213 LIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMD 272
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
++T ++ C G + + + KHGL+ EL + ++++ + G L +A+ +
Sbjct: 273 SVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQ 332
Query: 397 QM 398
QM
Sbjct: 333 QM 334
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+ F S+ +CT + + H + G ++ L+++Y G+V + F+
Sbjct: 76 EIDFNSLFDSCTKTLL---AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFD 132
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE-MMKQRVKPDAITFLGVISSCRHGGLVE 354
+ KD+ +WNSMI+ Y ++G AID F + ++ + + D TF V+ +C+ LV+
Sbjct: 133 QIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ--TLVD 190
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
K++ + K G + ++ + ++ + R G + AR MP + + W A S L
Sbjct: 191 GRKIHC-WVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMP-FRDMGSWNAMISGL 248
Query: 415 LLEPECA 421
+ A
Sbjct: 249 IQNGNAA 255
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 217/387 (56%), Gaps = 22/387 (5%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
S + +++C + G ++ G + ++ SLIT Y+ C I A+K+F E
Sbjct: 203 STFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNE 262
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+NVV WTA++ A+ + L ++ M PN TF+ L AC G AL +G
Sbjct: 263 TLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKG 322
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H I++G + + V NSL+ MY +CGNV AV VF N++ KDIVSWNS+I G AQH
Sbjct: 323 KEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQH 382
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG---LKPEL 372
G + A+ F +M+++ V P+ ITF G++S+C G++ +G+ +F+ ++++ L+P+
Sbjct: 383 GFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQ- 441
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLL 415
HY+C+VD+LGR G L+EA + ++ MP+ N++IW AA+ L
Sbjct: 442 -HYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILD 500
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
LEP C++ +V L+N+YA W +R+R MK GL PG SW+ + + F + D+
Sbjct: 501 LEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADR 560
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPE 502
S+ I LD+L ++K GYVP+
Sbjct: 561 SHPLSERIYEKLDWLGKKLKEFGYVPD 587
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 105/206 (50%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ +V ++++ Y + + + ++FEEMPVR+V+SWT++I + + L +++
Sbjct: 133 VKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKK 192
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M S +EP TF +LSAC + G H +++G F + ++ SLI+ Y C
Sbjct: 193 MLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMK 252
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+E A +FN K++V W +++ Y + A+ +F +M K P+ TF + +
Sbjct: 253 IEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKA 312
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPEL 372
C +++GK K GL+ ++
Sbjct: 313 CCGLEALDKGKEIHTMAIKLGLETDV 338
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+++ + +I Y++ + DA K+F+ M VR+VVSW ++I + M L+
Sbjct: 42 NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLF---- 97
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF-FSYIQVANSLISMYCKCGNV 287
+ M E N ++T+++ +G L GR Q + + + N+++ Y + G V
Sbjct: 98 DEMPEKNVISWTTMV-----NGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRV 152
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
EE V +F M +D++SW SMI G +G + A+ +F++M++ V+P TF V+S+C
Sbjct: 153 EEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSAC 212
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 238/441 (53%), Gaps = 53/441 (12%)
Query: 110 DTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN 169
D+P+ I + + L + + D S+ + +C + ++ G + + GF +N
Sbjct: 107 DSPI----DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSN 162
Query: 170 VYVGSSLITLYSKC------RVIID-------------------------AYKVFEEMPV 198
+Y+ + ++ LY+ C R++ + AY +F MP
Sbjct: 163 LYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPE 222
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
RNV SWT++IA + Q + + L+ M + ++ N+ T ++L+AC GAL G
Sbjct: 223 RNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRI 282
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + R GF ++++N+LI MY KCG +EEA VF M + +VSW++MI G A HG A
Sbjct: 283 HEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRA 342
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSC 377
A+ LF +M + ++P+ +TF+G++ +C H GL+ EG+ +F SM + +G+ P+++HY C
Sbjct: 343 EEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGC 402
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPEC 420
+VDLL RAGLL EA +FI MP+ PN V+W EA + L L+P
Sbjct: 403 MVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLN 462
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+V L+N+YA W+ ARVRK MKD+ +K PG S I + VV+ F A ++S+
Sbjct: 463 DGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDT 522
Query: 481 SEILPVLDFLVDQMKTLGYVP 501
+I + L+++M+ GYVP
Sbjct: 523 EQIFQRWEELLEEMRLKGYVP 543
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 148/345 (42%), Gaps = 65/345 (18%)
Query: 204 WTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
W + + A A+ + +D + YR+ R + P+ FT +S+L AC L GR H
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRL-RQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVV 154
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN---------------- 306
++GF S + + N ++ +Y CG + EA +F M +D+V+WN
Sbjct: 155 EKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAY 214
Query: 307 ---------------SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
SMIAGY Q G A AI LF +M + VK + +T + V+++C G
Sbjct: 215 DLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLG 274
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAE 411
++ G + +HG K + + ++D+ + G LEEA ++M V W A
Sbjct: 275 ALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMI 333
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP--------GCSWIEI 463
L + ++A R+ M G++ N CS + +
Sbjct: 334 GGLAMHGRA-----------------EEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGL 376
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDF---LVDQMKTLGYVPEVHE 505
++ RF A S TR I+P ++ +VD + G + E HE
Sbjct: 377 ISEGRRFFA---SMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 418
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 238/441 (53%), Gaps = 53/441 (12%)
Query: 110 DTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN 169
D+P+ I + + L + + D S+ + +C + ++ G + + GF +N
Sbjct: 107 DSPI----DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSN 162
Query: 170 VYVGSSLITLYSKC------RVIID-------------------------AYKVFEEMPV 198
+Y+ + ++ LY+ C R++ + AY +F MP
Sbjct: 163 LYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPE 222
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
RNV SWT++IA + Q + + L+ M + ++ N+ T ++L+AC GAL G
Sbjct: 223 RNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRI 282
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + R GF ++++N+LI MY KCG +EEA VF M + +VSW++MI G A HG A
Sbjct: 283 HEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRA 342
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSC 377
A+ LF +M + ++P+ +TF+G++ +C H GL+ EG+ +F SM + +G+ P+++HY C
Sbjct: 343 EEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGC 402
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPEC 420
+VDLL RAGLL EA +FI MP+ PN V+W EA + L L+P
Sbjct: 403 MVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLN 462
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+V L+N+YA W+ ARVRK MKD+ +K PG S I + VV+ F A ++S+
Sbjct: 463 DGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDT 522
Query: 481 SEILPVLDFLVDQMKTLGYVP 501
+I + L+++M+ GYVP
Sbjct: 523 EQIFQRWEELLEEMRLKGYVP 543
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 148/345 (42%), Gaps = 65/345 (18%)
Query: 204 WTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
W + + A A+ + +D + YR+ R + P+ FT +S+L AC L GR H
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRL-RQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVV 154
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN---------------- 306
++GF S + + N ++ +Y CG + EA +F M +D+V+WN
Sbjct: 155 EKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAY 214
Query: 307 ---------------SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
SMIAGY Q G A AI LF +M + VK + +T + V+++C G
Sbjct: 215 DLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLG 274
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAE 411
++ G + +HG K + + ++D+ + G LEEA ++M V W A
Sbjct: 275 ALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMI 333
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP--------GCSWIEI 463
L + ++A R+ M G++ N CS + +
Sbjct: 334 GGLAMHGRA-----------------EEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGL 376
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDF---LVDQMKTLGYVPEVHE 505
++ RF A S TR I+P ++ +VD + G + E HE
Sbjct: 377 ISEGRRFFA---SMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 418
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 200/334 (59%), Gaps = 21/334 (6%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACT 247
A K+F EMP +NV+SWT +I QE + + L+++ RM+ + +PN TF S+L AC+
Sbjct: 289 ARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACS 348
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN--MHGKDIVSW 305
LG+G+ H + + V ++LI+MY KCG + A +F++ +D+VSW
Sbjct: 349 NLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSW 408
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N +IA YA HG AI+ F+EM K KPD +T++G++S+C H GLVEEG YFD + K
Sbjct: 409 NGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK 468
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------- 407
+ DHY+C+VDL GRAG L+EA FI+++ P+A +W
Sbjct: 469 DRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGK 528
Query: 408 EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
+AA+ L +EPE A T++ L+N+YA W +AARVR MKDKGLK PGCSWIE+ N V
Sbjct: 529 QAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRV 588
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
+ F DKS+++ I +L L +MK GY P
Sbjct: 589 HVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEP 622
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 117/225 (52%), Gaps = 9/225 (4%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV ++++++ ++C I +A ++F+ MP R+V+SWTA+IA ++ ++D R++
Sbjct: 176 NVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEA----RLLF 231
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ M E N ++ ++++ + L + + S+ N++I+ + G++
Sbjct: 232 DRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSW----NTMITGLIQNGDLR 287
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSC 347
A +FN M K+++SW +MI G Q G + A+ +F M+ KP+ TF+ V+ +C
Sbjct: 288 RARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGAC 347
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ + EG+ ++K + S ++++ + G L AR
Sbjct: 348 SNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTAR 392
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 48/239 (20%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV ++++ Y + I DA K+F EMP +NVVSW +I +AQ ++D + L+
Sbjct: 114 NVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE--- 170
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
M E N ++ N+++SM +CG +E
Sbjct: 171 -KMPERNVVSW-----------------------------------NTVMSMLAQCGRIE 194
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA +F+ M +D++SW +MIAG +++G A LF+ M ++ V +++ +I+
Sbjct: 195 EARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNV----VSWNAMITGYA 250
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++E F+ M + +L ++ ++ L + G L AR +MP N + W
Sbjct: 251 QNLRLDEALDLFERMPER----DLPSWNTMITGLIQNGDLRRARKLFNEMP-KKNVISW 304
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 51/244 (20%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
NV + +IT SK I++A ++F+EM +V++WT +I+ + + M E R+
Sbjct: 50 GNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYI---KCGMIEEARRLF 106
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ N T+T+++ Y + +
Sbjct: 107 DRVDAKKNVVTWTAMVGG-----------------------------------YIRSNKI 131
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+A +FN M K++VSWN+MI GYAQ+G A+ LFE+M ++ V +++ V+S
Sbjct: 132 SDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV----VSWNTVMSML 187
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
G +EE + FD M PE D ++ ++ L + G ++EAR +MP N V
Sbjct: 188 AQCGRIEEARRLFDRM------PERDVISWTAMIAGLSKNGRIDEARLLFDRMP-ERNVV 240
Query: 406 IWEA 409
W A
Sbjct: 241 SWNA 244
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLKVDASFLSTA---------VTSCGSTRNIR 152
+F+++ V+ +I+ + E LK+ + LST V+ G+ N+
Sbjct: 292 LFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLA 351
Query: 153 G---GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE--MPVRNVVSWTAI 207
G G + +T + + +V S+LI +YSKC + A K+F++ R++VSW I
Sbjct: 352 GLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGI 411
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR-MG 266
IAA+A + ++ MR S +P+D T+ +LSAC+ +G + +G + ++
Sbjct: 412 IAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRS 471
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYAQH 315
L+ + + G ++EA + K W +++AG H
Sbjct: 472 ILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVH 521
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 256 RSAHCQTIRMGFFSYIQVA--NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
R+A R F VA N +I+ K G + EA +F+ M D+++W ++I+GY
Sbjct: 35 RTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYI 94
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ G+ A LF+ + K + +T+ ++ + + + F+ M +
Sbjct: 95 KCGMIEEARRLFDRV---DAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVV---- 147
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
++ ++D + G ++ A ++MP N V W S L
Sbjct: 148 SWNTMIDGYAQNGRIDSAMYLFEKMP-ERNVVSWNTVMSML 187
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 214/367 (58%), Gaps = 18/367 (4%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+A+++V ++L+ Y+K A +F+EMP R+VV+WT+++ A+ D L +YR
Sbjct: 74 VAHLHVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDAALRVYRD 133
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M S +EP+++ + LS+C GS L G+S H +R+G ++ V NSL+SMY K G+
Sbjct: 134 MVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTGS 193
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+ EA VF+ + V+W ++I GYAQ+G ++ ++ EM+ +PD +TF+G++ +
Sbjct: 194 LREARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFA 253
Query: 347 CRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
C H GLV+ G+ +F SM A HG+ P DHY+C+VD+LGRAG L+EA + + Q + +A
Sbjct: 254 CSHAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQSTMKLDAT 313
Query: 406 IWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMK 448
+W+ AAE L+P A ++ L+NLY+ R W AR+R LMK
Sbjct: 314 VWKALLGACRTHRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRERRWSDVARIRTLMK 373
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKV 508
+G+ PGCSW+ V + F ED+ + R EI ++ ++++++ G+V +
Sbjct: 374 SRGIAKEPGCSWVVASGVTHLFYVEDRGHPRTDEIYRKVEEMMEKVRAEGFVADTDWALQ 433
Query: 509 DDASHKR 515
D+A R
Sbjct: 434 DEAPEGR 440
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 241/486 (49%), Gaps = 64/486 (13%)
Query: 75 FLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH----------- 123
L + +HL + N +T S + VF+ + + +V LIS++
Sbjct: 282 LLCSKRQHLACKLLN-TYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFS 340
Query: 124 --HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
L L+ D+ + AV++CG +++ G + R ++ VG++LI +YS
Sbjct: 341 IFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYS 400
Query: 182 -------------------------------KCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
KC I A ++F+EMP+RN VSWTA+I
Sbjct: 401 RSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITG 460
Query: 211 FAQEWQVDMCLELYRMMRNSMLE-PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ Q LEL++ MR + P T ++LS C GA G S H +
Sbjct: 461 YVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDL 520
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ V N+L+ MY K G + A+ +F M +D+ SW +MI+G A HG A++ F +M
Sbjct: 521 DVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMS 580
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLL 388
K P+ +T L V+S+C H GLV EG+ F M + HG+KP++ HY C+VDLLGRAGLL
Sbjct: 581 KSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLL 640
Query: 389 EEARDFIKQMPIYPNAVIWEAAESRLL-----------------LEPECAATHVQLANLY 431
EA++ I+ MPI P++VIW + S L LEP+ ++ L N+Y
Sbjct: 641 REAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIY 700
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
W+ A + RK M+D+ +K PGCSW+E+ VV+ F AED + +++ VL+ +
Sbjct: 701 CSASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAIT 760
Query: 492 DQMKTL 497
+QMK L
Sbjct: 761 EQMKDL 766
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF--SYIQVANSLISMYCKCG 285
RN+ + F F +L C G+L + + H + + +G +A L++ Y + G
Sbjct: 248 RNAHMNTQTFYF--LLQKC---GSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLG 302
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
+ +A VFN++ DIVSW +I+ Y +A +F + ++PD+ +G +S
Sbjct: 303 SPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVS 362
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+C H + G++ + + L + + ++D+ R+G +E A K M I
Sbjct: 363 ACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEI 417
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 230/399 (57%), Gaps = 18/399 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE +S+ + +C + + AI+ NV+V ++L+ +Y+KC +
Sbjct: 156 MQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGL 215
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA VFE MP R+VV+W+++ A + Q + L L+R + L+ + F +S++ A
Sbjct: 216 MKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICA 275
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G A+ +G+ + + GF S I VA+SLI MY KCG +EE+ VF ++ +++V W
Sbjct: 276 CAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLW 335
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI+G ++H ++ + LFE+M + + P+ +TF+ V+S+C H GLV +G+ YFD M K
Sbjct: 336 NAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTK 395
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------E 408
H L P + HYSC+VD L RAG + EA D I ++P +A +W E
Sbjct: 396 EHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAE 455
Query: 409 AAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
A +L +EP + ++ L+N+YA WD+ A++RKL+K+ +K G SWIEI + V
Sbjct: 456 VAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKV 515
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
+ F ++++ ++ EI L+ ++D+++ LGY E +
Sbjct: 516 HLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHD 554
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 1/279 (0%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
SF+ + C + + G + G ++ + LI +YSKC + A +VF+E
Sbjct: 65 SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDE 124
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP R++VSW +I + Q + + L+L M+ ++FT +S+L AC AL +
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H I+ + VA +L+ +Y KCG +++AV VF +M + +V+W+SM AGY Q+
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQN 244
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
+ +A+ LF + + +K D VI +C + EGK ++K G +
Sbjct: 245 EMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVA 304
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
S ++D+ + G +EE+ + + N V+W A S L
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGL 342
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 226/431 (52%), Gaps = 49/431 (11%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
++ + ++ E +K D + V+SC ++ G C G V + ++L+ +
Sbjct: 193 LNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDM 252
Query: 180 YSKC------RVIID-------------------------AYKVFEEMPVRNVVSWTAII 208
Y KC R + D A+K+F+EMP ++VV W A+I
Sbjct: 253 YMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMI 312
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ + L L+ M+ + P++ T S LSAC+ GAL G H +
Sbjct: 313 GGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELS 372
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
+ + +LI MY KCG + +A+ VF + G++ ++W ++I+G A HG A AI F EM
Sbjct: 373 LNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEM 432
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGL 387
+ V PD +TFLG++S+C HGGLVEEG+ YF M +K L P+L HYSC+VDLLGRAGL
Sbjct: 433 IDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGL 492
Query: 388 LEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANL 430
LEEA + IK MPI +AV+W E A S+LL ++P + +V LAN+
Sbjct: 493 LEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANM 552
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
Y W +A + RKLM+ +G++ PGCS IE+ +VY F DKS+ + +I L L
Sbjct: 553 YGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQL 612
Query: 491 VDQMKTLGYVP 501
Q++ + P
Sbjct: 613 TRQLELVECTP 623
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 144/304 (47%), Gaps = 32/304 (10%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C IR G+ + GF ++++V +++I L C + A K+F++ VR++VS
Sbjct: 116 ACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVS 175
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W ++I + + L YR M+ ++P++ T ++S+C L GR +HC
Sbjct: 176 WNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIE 235
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL------ 317
G + +AN+L+ MY KCGN+E A +F++M K +VSW +M+ GYAQ GL
Sbjct: 236 ENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWK 295
Query: 318 -------------------------AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
A+ LF EM + PD +T + +S+C G
Sbjct: 296 LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGA 355
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
++ G + KH L + + ++D+ + G + +A +++P N++ W A S
Sbjct: 356 LDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELP-GRNSLTWTAIIS 414
Query: 413 RLLL 416
L L
Sbjct: 415 GLAL 418
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 3/244 (1%)
Query: 158 QCLAIRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW 215
Q + TG I + + S LI S+ R + + N SW I F
Sbjct: 26 QSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSE 85
Query: 216 QVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
+ LY R+++ +P+++T+ + AC + G + +GF S I V+
Sbjct: 86 NPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVS 145
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N++I + CG+++ A +F+ +D+VSWNSMI GY + G A A++ + EM + +K
Sbjct: 146 NAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIK 205
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
PD +T +GV+SSC ++ G+ + ++GLK + + ++D+ + G LE AR
Sbjct: 206 PDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKL 265
Query: 395 IKQM 398
M
Sbjct: 266 FDSM 269
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 141/365 (38%), Positives = 208/365 (56%), Gaps = 19/365 (5%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM-PVRNVVSWTAIIAAFA 212
G L ++ GF VYV S+L+ +Y+KC DA F ++ V +VV WTA+I
Sbjct: 345 GKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHV 404
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
Q + + L LY M + P+ T TS+L AC AL G+ H Q ++ GF
Sbjct: 405 QNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGS 464
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V +L +MY KCGN+E+++ VF M +DI+SWNS+I+G++QHG A+DLFEEM +
Sbjct: 465 VGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEG 524
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEA 391
+ PD ITF+ V+ +C H GLV+ G YF +M+K +GL P+LDHY+C+VD+L RAG L+EA
Sbjct: 525 IAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEA 584
Query: 392 RDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGV 434
+DFI+ + I +W A E + L E ++ ++ L+N+YA
Sbjct: 585 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQ 644
Query: 435 RCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
R W+ RVR LM+ +G+ +PGCSW+E+ N V F ++ + +I L L M
Sbjct: 645 RKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQHPEAEKINVELIRLAKHM 704
Query: 495 KTLGY 499
K GY
Sbjct: 705 KDEGY 709
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 134/242 (55%), Gaps = 1/242 (0%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM- 227
NV+V ++L+ +Y K I DA +VF++MP RN VSW A+++ +A + EL+R+M
Sbjct: 157 NVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLML 216
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ LE N+F T++LSA + L G H ++ G ++ V NSL++MY K +
Sbjct: 217 QECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECM 276
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ A+ VF + ++ ++W++MI GYAQ+G A A +F +M P TF+G++++
Sbjct: 277 DAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNAS 336
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G + GK M K G + ++ S +VD+ + G +A+D Q+ + VIW
Sbjct: 337 SDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIW 396
Query: 408 EA 409
A
Sbjct: 397 TA 398
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 2/265 (0%)
Query: 137 FLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
F++TAV S S + G L ++ G + V V +SL+T+Y+K + A VF
Sbjct: 226 FVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGS 285
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
RN ++W+A+I +AQ + D ++ M ++ P +FTF IL+A + GAL G
Sbjct: 286 SKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVG 345
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYAQ 314
+ AH +++GF + V ++L+ MY KCG +A F+ ++ D+V W +MI G+ Q
Sbjct: 346 KQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQ 405
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+G A+ L+ M K+ V P +T V+ +C +E GK + K G
Sbjct: 406 NGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSV 465
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMP 399
+ + + + G LE++ ++MP
Sbjct: 466 GTALSTMYSKCGNLEDSMVVFRRMP 490
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY-SKCRVIID-AYKV 192
A F+ + S R R G A+++G ++ V +SLIT Y S R ++ A+ V
Sbjct: 14 AQFIEHLRCAASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAV 73
Query: 193 FEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM--LEPNDFTFTSILSACTG 248
F ++P +R+V SW +++ ++ Q L +R M +S + P +F ++ +A
Sbjct: 74 FADIPAGLRDVASWNSLLNPLSRH-QPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAAR 132
Query: 249 SGALGQGRSAH---CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
+ G AH C+ + + V+ +L++MYCK G + +A VF+ M ++ VSW
Sbjct: 133 VPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSW 192
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQ 331
+M++GYA + A +LF M+++
Sbjct: 193 AAMVSGYATGKCSEEAFELFRLMLQE 218
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 74/139 (53%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++ + +E + +++ + +C + G ++ GF VG++L
Sbjct: 410 EEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTAL 469
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
T+YSKC + D+ VF MP R+++SW +II+ F+Q + L+L+ M+ + P+
Sbjct: 470 STMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDH 529
Query: 237 FTFTSILSACTGSGALGQG 255
TF ++L AC+ G + +G
Sbjct: 530 ITFINVLCACSHMGLVDRG 548
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 40/208 (19%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGN--VEEAVYVFNNMHG--KDIVSWNSMIA 310
G + H ++ G S+ V+NSLI+ YC + A VF ++ +D+ SWNS++
Sbjct: 33 GDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLN 92
Query: 311 GYAQHGLAVRAIDLFEEMMKQR--VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
++H + A+ F MM V P +F V ++ G V H
Sbjct: 93 PLSRH-QPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAV------AHAF 145
Query: 369 KPELDHYS---------CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPE 419
+L S ++++ + G + +AR QMP + NAV W A
Sbjct: 146 ACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMP-HRNAVSWAA---------- 194
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLM 447
+ + YA +C ++A + +LM
Sbjct: 195 -------MVSGYATGKCSEEAFELFRLM 215
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 220/401 (54%), Gaps = 19/401 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I M+ + + +K D + + +C + RN+R GA +R G +V +SL+ +
Sbjct: 194 IQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDM 253
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K ++ A +VF M RN VSW+A+I+ FAQ Q D L L+R M+ S ++P+
Sbjct: 254 YAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGAL 313
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S L AC+ G L GRS H +R F+ I + + I MY KCG++ A +FN +
Sbjct: 314 VSALLACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGSLASAQMLFNMISD 372
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D++ WN+MIA HG A+ LF+EM + ++PD TF ++S+ H GLVEEGK++
Sbjct: 373 RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLW 432
Query: 360 FDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
F M H + P HY C+VDLL R+GL+EEA D + M P IW A
Sbjct: 433 FGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNK 492
Query: 410 --------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
A++ L L+P+ ++NLYA + WD+ +VRKLMKD G K PGCS I
Sbjct: 493 KLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSI 552
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
EI + F ED+S+ + EI+ + L +M+ +GY+P
Sbjct: 553 EIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPR 593
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 148/283 (52%), Gaps = 12/283 (4%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
+ D++ + A+++C ++RGG + A G+ +V+V SSL+ LY++ + DA K
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF MP R+ V+W+ ++A F Q +++YR MR ++ ++ ++ ACT +
Sbjct: 165 VFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARN 224
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ G S H +R G + A SL+ MY K G ++ A VF M ++ VSW++MI+G
Sbjct: 225 VRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISG 284
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+AQ+G + A+ LF M ++PD+ + + +C + G ++ G+ + HG
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGR------SVHGFIVR 338
Query: 372 LDHYSCV-----VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++C+ +D+ + G L A+ + M + ++W A
Sbjct: 339 RFDFNCILGTAAIDMYSKCGSLASAQ-MLFNMISDRDLILWNA 380
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/415 (33%), Positives = 237/415 (57%), Gaps = 19/415 (4%)
Query: 122 MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
++ + + D ++T V++C +++ G +GS+L+ +Y+
Sbjct: 167 LYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYA 226
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFT 240
KC + A +VF+++ ++V +W+A+I + + + L+L+R + S + PN+ T
Sbjct: 227 KCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTIL 286
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
+++SAC G L GR H R + + NSLI M+ KCG+++ A +F++M K
Sbjct: 287 AVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK 346
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG-KVY 359
D++SWNSM+ G+A HGL A+ F M ++PD ITF+GV+++C H GLV+EG K++
Sbjct: 347 DLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLF 406
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------ 407
++ A +G++ + +HY C+VDLL RAGLL EAR+FI+ MP+ P+ IW
Sbjct: 407 YEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNN 466
Query: 408 -----EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIE 462
EAA L LEP ++ L+N+YA + W++ +VR+LM +KG++ PGCS +
Sbjct: 467 LELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVV 526
Query: 463 IMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
I N+ + F A D S+ ++EI +L + +++K GYV + E ++ +K+ E
Sbjct: 527 IDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEE 581
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 139/285 (48%), Gaps = 2/285 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L R R D + + C + G ++ +++Y+ ++L+ +Y+ C
Sbjct: 70 LERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGD 129
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A +FE M RN V WT++I+ + + + L LY+ M P++ T +++SA
Sbjct: 130 LKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSA 189
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C LG G H M + ++L++MY KCG+++ A VF+ + KD+ +W
Sbjct: 190 CAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAW 249
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
+++I GY ++ + A+ LF E+ ++P+ +T L VIS+C G +E G+ D +
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + + ++D+ + G ++ A+ M Y + + W +
Sbjct: 310 RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMS-YKDLISWNS 353
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 13/217 (5%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACT 247
AY VF +V++W +++ AF L+ Y M+ S P+ FTF S+L C
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G+ H Q ++ S + + +L++MY CG+++ A ++F M ++ V W S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI+GY ++ A+ L+++M + PD +T ++S+C E K M H
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC------AELKDLGVGMKLHS 204
Query: 368 LKPELDHYSC------VVDLLGRAGLLEEARDFIKQM 398
E+D C +V++ + G L+ AR ++
Sbjct: 205 HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKL 241
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 243/445 (54%), Gaps = 31/445 (6%)
Query: 79 DSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFL 138
D++ Q F D NS + ++Q D PV + M + + L S
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAA---YEQN-DDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 139 STAVTS--CGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEE 195
S S C ++R++ G +R G++ +V +G++++ +Y+K ++ A+KVFE
Sbjct: 425 SIVAQSRDCKNSRSVHG------FIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEI 478
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACTGSGALGQ 254
+PV++V+SW +I +AQ +E+Y+MM + PN T+ SIL A GAL Q
Sbjct: 479 IPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQ 538
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G H + I+ + VA LI +Y KCG + +A+ +F + + V+WN++I+ +
Sbjct: 539 GMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGI 598
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
HG A + + LF EM+ + VKPD +TF+ ++S+C H G VEEGK F M ++G+KP L H
Sbjct: 599 HGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKH 658
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----------------AESRLL-LE 417
Y C+VDLLGRAG LE A DFIK MP+ P+A IW A A RL ++
Sbjct: 659 YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 718
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
+ +V L+N+YA V W+ +VR L +++GLK PG S IE+ V F ++S+
Sbjct: 719 SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSH 778
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPE 502
+ EI L L +MK+LGY+P+
Sbjct: 779 PKCKEIYEELRVLTAKMKSLGYIPD 803
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 151/287 (52%), Gaps = 3/287 (1%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ E +K++ + + + C +I I+ G +++V ++LI +Y+K
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFG 365
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA K F++M + +VVSW +IIAA+ Q + M+ + +P+ T S+ S
Sbjct: 366 NLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLAS 425
Query: 245 ACTGSGALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
S RS H +R G+ + + N+++ MY K G ++ A VF + KD++
Sbjct: 426 IVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVI 485
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
SWN++I GYAQ+GLA AI++++ M + + + P+ T++ ++ + H G +++G
Sbjct: 486 SWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGR 545
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K L ++ +C++D+ G+ G L +A Q+P ++V W A
Sbjct: 546 VIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNA 591
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 138/253 (54%), Gaps = 5/253 (1%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
L + G + ++++ + L+ LY+ + + F+++P ++V +W ++I+A+
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHF 198
Query: 218 DMCLE-LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
+ Y+++ S + P+ +TF +L AC G L GR HC ++GF + VA S
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAAS 255
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI MY + G A +F++M +D+ SWN+MI+G Q+G A +A+D+ +EM + +K +
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+T + ++ C G + + + KHGL+ +L + ++++ + G LE+AR +
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375
Query: 397 QMPIYPNAVIWEA 409
QM I + V W +
Sbjct: 376 QMFI-TDVVSWNS 387
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 158/343 (46%), Gaps = 36/343 (10%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
++ D + +CG+ + G C A + GF NV+V +SLI +YS+ A
Sbjct: 213 EIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIA 269
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
+F++MP R++ SW A+I+ Q L++ MR ++ N T SIL C
Sbjct: 270 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQL 329
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
G + H I+ G + V+N+LI+MY K GN+E+A F M D+VSWNS+I
Sbjct: 330 GDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSII 389
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG-- 367
A Y Q+ V A F +M +PD +T + + S +V + + +S + HG
Sbjct: 390 AAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLAS------IVAQSRDCKNSRSVHGFI 443
Query: 368 -----LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAA 422
L ++ + VVD+ + GLL+ A + +P+ + + W
Sbjct: 444 MRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPV-KDVISWNT------------- 489
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKD-KGLKTNPGCSWIEIM 464
L YA +A V K+M++ K + N G +W+ I+
Sbjct: 490 ----LITGYAQNGLASEAIEVYKMMEECKEIIPNQG-TWVSIL 527
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 22/198 (11%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + G I ++ L+++Y G+V + F+ + KD+ +WNSMI+ Y +G
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHF 198
Query: 319 VRAIDLFEE-MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
AI F + ++ ++PD TF V+ +C G LV+ K++ + K G + + +
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKAC--GTLVDGRKIHCWAF-KLGFQWNVFVAAS 255
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCW 437
++ + R G AR MP + + W A S L+ A
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMP-FRDMGSWNAMISGLIQNGNAA---------------- 298
Query: 438 DQAARVRKLMKDKGLKTN 455
QA V M+ +G+K N
Sbjct: 299 -QALDVLDEMRLEGIKMN 315
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 208/351 (59%), Gaps = 18/351 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++++ Y+K ++ A ++F EMP ++VV W A+I F Q + L L+ M+ S +
Sbjct: 326 TTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVA 385
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T + LSAC+ GAL G H + + + +L+ MY KCGN+++A+ V
Sbjct: 386 PDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQV 445
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M G++ ++W ++I G A HG AI F EM+ + PD ITF+GV+S+C HGGLV
Sbjct: 446 FEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLV 505
Query: 354 EEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----- 407
++G+ YF M +K+G+ P+L HYSC+VDLLGRAG LEEA + I+ MP P+AV+W
Sbjct: 506 DQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFF 565
Query: 408 -----------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
E A S+LL L+P +V LAN+Y W+QA +VRK+M+++G++
Sbjct: 566 GSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKT 625
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
PGCS IE+ +VY F DKS+ + +I L L Q++ + P + +E
Sbjct: 626 PGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVIEVDPSLFKE 676
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 143/296 (48%), Gaps = 34/296 (11%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+ GF ++++V +++I + C ++ A K+F+E VR++VSW +II + + D
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAF 241
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+LY M + P++ T ++SA L GR H MG + +AN+L+ MY
Sbjct: 242 DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMY 301
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL---AVR------------------ 320
KC N+E A +F NM K +VSW +M+ GYA+ GL AVR
Sbjct: 302 IKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIG 361
Query: 321 ----------AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
A+ LF EM V PD IT + +S+C G ++ G + KH L
Sbjct: 362 GFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTM 421
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL--EPECAATH 424
+ + +VD+ + G +++A ++MP N++ W A L L +P A ++
Sbjct: 422 NVALGTALVDMYAKCGNIKKAIQVFEEMP-GRNSLTWTAIICGLALHGQPHAAISY 476
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
Query: 162 IRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
I TG I++ + S L+ S+ R + K+ NV SW I + +
Sbjct: 78 ISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPIN 137
Query: 220 CLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+ LYR M+R P+++T+ + C G I++GF S + V N++I
Sbjct: 138 AVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAII 197
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
+ CG + A +F+ +D+VSWNS+I GY + GLA A DL+ +M + V PD +
Sbjct: 198 HVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEV 257
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
T +GV+S+ + G+ S+ + GL + + ++D+ + +E A+ + M
Sbjct: 258 TMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENM 317
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 2/199 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ H++ + D + +++C + G + NV +G++L+ +
Sbjct: 373 LALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDM 432
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I A +VFEEMP RN ++WTAII A Q + + M + L P++ TF
Sbjct: 433 YAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITF 492
Query: 240 TSILSACTGSGALGQGRSAHCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM- 297
+LSAC G + QGR Q T + G ++ + L+ + + G +EEA + +M
Sbjct: 493 IGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMP 552
Query: 298 HGKDIVSWNSMIAGYAQHG 316
D V W ++ G HG
Sbjct: 553 FEPDAVVWGALFFGSRIHG 571
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 215/387 (55%), Gaps = 18/387 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + + +H + + + +S A+ +CG RN++ G +R + VGS
Sbjct: 479 DGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGS 538
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+LI++YS C + A VF E+ R+VV W +II+A AQ + L+L R M S +E
Sbjct: 539 ALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 598
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T S L AC+ AL QG+ H IR G + + NSLI MY +CG+++++ +F
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M +D+VSWN MI+ Y HG + A++LF+ +KP+ ITF ++S+C H GL+E
Sbjct: 659 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIE 718
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
EG YF M ++ + P ++ Y+C+VDLL RAG E +FI++MP PNA +W
Sbjct: 719 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AA LEP+ + +V +AN+Y+ W+ AA++R LMK++G+ P
Sbjct: 779 CRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPP 838
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEI 483
GCSWIE+ ++ F D S+ + +I
Sbjct: 839 GCSWIEVKRKLHSFVVGDTSHPLMEQI 865
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 4/278 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ + C N+R G + G ++GS L+ +Y + + DA ++F++M
Sbjct: 93 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
RNV SWTAI+ + + ++L+ +M N + P+ F F + AC+ G+
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
+ + +GF V S++ M+ KCG ++ A F + KD+ WN M++GY G
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSC 377
+A+ +M VKPD +T+ +IS G EE YF M KP + ++
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332
Query: 378 VVDLLGRAGLLEEARDFIKQM---PIYPNAVIWEAAES 412
++ + G EA ++M + PN++ +A S
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVS 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 152/321 (47%), Gaps = 37/321 (11%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVG 173
D E L S+ + E +K ++ +++AV++C + +R G I+ + +++ VG
Sbjct: 343 DFEAL-SVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 401
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA-----------------QEWQ 216
+SL+ Y+KCR + A + F + ++VSW A++A +A Q +
Sbjct: 402 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIE 461
Query: 217 VDM------------------CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
D+ LE ++ M + ++PN T + L+AC L G+
Sbjct: 462 PDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEI 521
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H +R V ++LISMY C ++E A VF+ + +D+V WNS+I+ AQ G +
Sbjct: 522 HGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRS 581
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
V A+DL EM V+ + +T + + +C + +GK + + GL + +
Sbjct: 582 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSL 641
Query: 379 VDLLGRAGLLEEARDFIKQMP 399
+D+ GR G ++++R MP
Sbjct: 642 IDMYGRCGSIQKSRRIFDLMP 662
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 6/203 (2%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMP-----VRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+++I+ Y++ +A K F EM NVVSWTA+IA Q L ++R M
Sbjct: 295 NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMV 354
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKCGNV 287
++PN T S +SACT L GR H I++ S + V NSL+ Y KC +V
Sbjct: 355 LEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSV 414
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
E A F + D+VSWN+M+AGYA G AI+L EM Q ++PD IT+ G+++
Sbjct: 415 EVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGF 474
Query: 348 RHGGLVEEGKVYFDSMAKHGLKP 370
G + +F M G+ P
Sbjct: 475 TQYGDGKAALEFFQRMHSMGMDP 497
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 208/351 (59%), Gaps = 18/351 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++++ Y+K ++ A ++F EMP ++VV W A+I F Q + L L+ M+ S +
Sbjct: 326 TTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVA 385
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T + LSAC+ GAL G H + + + +L+ MY KCGN+++A+ V
Sbjct: 386 PDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQV 445
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M G++ ++W ++I G A HG AI F EM+ + PD ITF+GV+S+C HGGLV
Sbjct: 446 FEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLV 505
Query: 354 EEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----- 407
++G+ YF M +K+G+ P+L HYSC+VDLLGRAG LEEA + I+ MP P+AV+W
Sbjct: 506 DQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFF 565
Query: 408 -----------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
E A S+LL L+P +V LAN+Y W+QA +VRK+M+++G++
Sbjct: 566 GSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKT 625
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
PGCS IE+ +VY F DKS+ + +I L L Q++ + P + +E
Sbjct: 626 PGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVIEVDPSLFKE 676
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 143/296 (48%), Gaps = 34/296 (11%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+ GF ++++V +++I + C ++ A K+F+E VR++VSW +II + + D
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAF 241
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+LY M + P++ T ++SA L GR H MG + +AN+L+ MY
Sbjct: 242 DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMY 301
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL---AVR------------------ 320
KC N+E A +F NM K +VSW +M+ GYA+ GL AVR
Sbjct: 302 IKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIG 361
Query: 321 ----------AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
A+ LF EM V PD IT + +S+C G ++ G + KH L
Sbjct: 362 GFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTM 421
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL--EPECAATH 424
+ + +VD+ + G +++A ++MP N++ W A L L +P A ++
Sbjct: 422 NVALGTALVDMYAKCGNIKKAIQVFEEMP-GRNSLTWTAIICGLALHGQPHAAISY 476
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 3/240 (1%)
Query: 162 IRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
I TG I++ + S L+ S+ R + K+ N SW I + +
Sbjct: 78 ISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPIN 137
Query: 220 CLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+ LYR M+R P+++T+ + C G I++GF S + V N++I
Sbjct: 138 AVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAII 197
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
+ CG + A +F+ +D+VSWNS+I GY + GLA A DL+ +M + V PD +
Sbjct: 198 HVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEV 257
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
T +GV+S+ + G+ S+ + GL + + ++D+ + +E A+ + M
Sbjct: 258 TMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENM 317
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 2/199 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ H++ + D + +++C + G + NV +G++L+ +
Sbjct: 373 LALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDM 432
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I A +VFEEMP RN ++WTAII A Q + + M + L P++ TF
Sbjct: 433 YAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITF 492
Query: 240 TSILSACTGSGALGQGRSAHCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM- 297
+LSAC G + QGR Q T + G ++ + L+ + + G +EEA + +M
Sbjct: 493 IGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMP 552
Query: 298 HGKDIVSWNSMIAGYAQHG 316
D V W ++ G HG
Sbjct: 553 FEPDAVVWGALFFGSRIHG 571
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 233/406 (57%), Gaps = 23/406 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K ++++ ++ + K+D L++ + + S ++ GG + I+ GF N +VGS LI
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLI 282
Query: 178 TLYSKC---RVIIDAYKVFEEMPVRNVVSWTAIIAAFA-QEWQVDMCLELYRMMRNSMLE 233
YSKC + D+ KVF+E+ ++V W +I+ ++ E + ++ +R M+
Sbjct: 283 DFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHR 342
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVY 292
P+D +F + SAC+ + QG+ H I+ S I V N+LIS+Y K GN+ +A
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARR 402
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF+ M + VS+N MI GYAQHG A+ L++ M+ + P+ ITF+ ++S+C H G
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGK 462
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---- 407
V+EG+ YF++M + ++PE +HYSC++DLLGRAG LEEA FI MP P +V W
Sbjct: 463 VDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Query: 408 -------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
AA+ ++++P A +V LAN+YA W++ A VRK M+ K ++
Sbjct: 523 GACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRK 582
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
PGCSWIE+ + F AED S+ + E+ L+ ++ +MK +GYV
Sbjct: 583 KPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYV 628
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 40/297 (13%)
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC---------------------RV 185
+ R++ G L +++ ++ Y+ + + LYSKC V
Sbjct: 20 AERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNV 79
Query: 186 IIDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
I+ AY ++F+E P + VS+ +I+ +A + + L++ MR E +
Sbjct: 80 IVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVD 139
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
FT + +++AC L + HC + GF SY V N+ ++ Y K G + EAV VF
Sbjct: 140 GFTLSGLIAACCDRVDL--IKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 296 NMHG-KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M G +D VSWNSMI Y QH +A+ L++EM+ + K D T V+++ +
Sbjct: 198 GMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLL----GRAGLLEEARDFIKQMPIYPNAVIW 407
G+ + + K G S ++D GR G+ + + F Q + P+ V+W
Sbjct: 258 GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVF--QEILSPDLVLW 312
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 12/277 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+VD LS + +C ++ C A+ GF + V ++ +T YSK ++ +A
Sbjct: 136 FEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 191 KVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
VF M +R+ VSW ++I A+ Q + L LY+ M + + FT S+L+A T
Sbjct: 194 SVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL 253
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG---NVEEAVYVFNNMHGKDIVSWN 306
L GR H + I+ GF V + LI Y KCG + ++ VF + D+V WN
Sbjct: 254 DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWN 313
Query: 307 SMIAGYA---QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+MI+GY+ +H + A+ F +M + +PD +F+ V S+C + +GK
Sbjct: 314 TMISGYSMNEEH--SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLA 371
Query: 364 AKHGLKPE-LDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K + + + ++ L ++G L +AR +MP
Sbjct: 372 IKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMP 408
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 19/176 (10%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F ++ S C G L R+A T FSY N ++ Y K + A +F+
Sbjct: 49 FVNLYSKC---GCLSYARAAFDSTEEPNVFSY----NVIVKAYAKDSKIHIARQLFDENP 101
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS-CRHGGLVEEGK 357
D VS+N++I+GYA V A+ LF+ M + + D T G+I++ C L+++
Sbjct: 102 QPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLIKQLH 161
Query: 358 VYFDSMAKHGLKPELDHYSCV----VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + D YS V V + GLL EA M + V W +
Sbjct: 162 CF-------AVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNS 210
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 227/420 (54%), Gaps = 53/420 (12%)
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
+N G+ A GF+ ++YVG+++I +Y K V+ A KVF+EMP R+VV+WT +I
Sbjct: 123 KNPSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELI 182
Query: 209 AAFAQEWQVDMCLELY-------------------------------RMMRNSMLEPNDF 237
A+A+ +D EL+ R MR + + ++
Sbjct: 183 VAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEI 242
Query: 238 TFTSILSACTGSGALGQGRSAH--CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T +SAC G G ++ R G S + V ++LI MY KCGNVEEA VF
Sbjct: 243 TLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFK 302
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M ++ S++SMI G+A HG A AI LF EM++ +KP+ +TF+G+ ++C H G+VE+
Sbjct: 303 GMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQ 362
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
G+ F +M + +G+ P DHY+C+ DLLGRAG LE+A ++ MP+ PN +W
Sbjct: 363 GQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGAS 422
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
A+ S LEP+ ++ L+ YA WD +RVRKLM++K L+ NPG
Sbjct: 423 HIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPG 482
Query: 458 CSWIEIMN-VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD-DASHKR 515
CSW+E N +++ F A D + ++EI LD L+ ++K GY P+++ D D KR
Sbjct: 483 CSWVEAKNGIIHEFFAGDVKHPEINEIKKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKR 542
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 44/244 (18%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F ++ N ++A+I A+A+ + LY M N+ + P FTF+++ S
Sbjct: 68 LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSL 127
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW------ 305
G H GF + + V N++I MY K G ++ A VF+ M +D+V+W
Sbjct: 128 ---GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVA 184
Query: 306 -------------------------NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
SM+ GY+Q+ + +A+ F +M + V D IT
Sbjct: 185 YARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITL 244
Query: 341 LGVISSCRHGGLVEEGKVYFDSM------AKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
+G IS+C G+ Y D + ++ G + S ++D+ + G +EEA +
Sbjct: 245 VGAISACAQLGV----SGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNV 300
Query: 395 IKQM 398
K M
Sbjct: 301 FKGM 304
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 216/384 (56%), Gaps = 22/384 (5%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ + SC + + I+ G GF + + + L+ LY C + A +F+ +P
Sbjct: 79 ASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK 138
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
N+ W +I +A + ++LY M + L P++FTF +L AC A+ GR
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD---IVSWNSMIAGYAQH 315
H ++ G+ + V +LI MY KCG V A VF+ + +D +VSWN+MI GYA H
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMH 258
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDH 374
G A A+DLFEE M + KPD ITF+GV+S+C HGGL+EEG ++F++M + + + P + H
Sbjct: 259 GHATEALDLFEE-MNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQH 317
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LE 417
Y+C+VDLLG +G L+EA + I QM + P++ +W E A RL+ LE
Sbjct: 318 YTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELE 377
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
P+ A +V L+N+YA W+ A++RKLM D+ LK + CSWIE+ N V+ F + D S+
Sbjct: 378 PDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSH 437
Query: 478 TRLSEILPVLDFLVDQMKTLGYVP 501
EI L+ + MK GY P
Sbjct: 438 PLSDEIYSELERVGGLMKEAGYSP 461
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 84/171 (49%)
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
++ L P + S+L +C A+ G+ H Q GF +A L+++YC C ++
Sbjct: 67 ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
A +F+ + +I WN +I GYA +G A+ L+ +M + PD TF V+ +C
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+E G+ + + + G + ++ + ++D+ + G + AR+ ++
Sbjct: 187 AALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI 237
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 228/406 (56%), Gaps = 19/406 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D +K + + ++ + S + SCG ++ G + I+ G + V+VG+
Sbjct: 295 DFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGT 354
Query: 175 SLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++I +YS + +A K F++M + VSW A+IA + +++ +E + M +
Sbjct: 355 AIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVA 414
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
N+FT+++I AC+ +L H + I+ S + VA+SLI Y +CG++E AV V
Sbjct: 415 CNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQV 474
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F + D+VSWNS+I Y+Q+G +AI L +M+++ KP + TFL V+S+C H GLV
Sbjct: 475 FTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLV 534
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
+EG+ +F SM + + ++PE H SC+VD+LGRAG LE A DFIK++ + P A IW
Sbjct: 535 QEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLA 594
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
AE L LEP A +V L+N+YA V W A R+LM+ K +
Sbjct: 595 ACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKE 654
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
PGCSWIE+ N +Y+F + DK++ + ++ L LV Q++ +GY P
Sbjct: 655 PGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSP 700
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/434 (30%), Positives = 210/434 (48%), Gaps = 88/434 (20%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ +S ++ +E L+ + L + + +CG + R G + ++ F ++ Y+ S+L
Sbjct: 886 EEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISAL 945
Query: 177 ITLYSK-------CRVI---------------------------IDAYKVFEEMPVR-NV 201
I +YSK CRV +B + ++ V+ NV
Sbjct: 946 IYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNV 1005
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS----------------- 244
VSW +IA F+Q M E++R+M + +EP+ ++TS++S
Sbjct: 1006 VSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKE 1065
Query: 245 ------------------ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
ACT L G+ H + +G + V ++L+ MY KCG
Sbjct: 1066 MLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGY 1125
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+ EA +F M ++ V+WNS+I GYA HG AI+LF +M + K D +TF V+++
Sbjct: 1126 ISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNA 1185
Query: 347 CRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
C H G+VE G+ F M K+ ++P L+HY+C+VDLLGRAG L EA D IK MP+ P+
Sbjct: 1186 CSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKF 1245
Query: 406 IWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMK 448
+W AAE LEPE + + L+NLYA W AA+++K+MK
Sbjct: 1246 VWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMK 1305
Query: 449 DKGLKTNPGCSWIE 462
+ PGCSWIE
Sbjct: 1306 QRKFGKFPGCSWIE 1319
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 151/276 (54%), Gaps = 6/276 (2%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
++ +A++ CG + G + C ++ G ++ +V +SLI +Y+KC + A +V+++M
Sbjct: 115 YVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKM 174
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+ + +I+A+A+ +++ + N PN +T++++L+ C A+ +G+
Sbjct: 175 TSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGK 234
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H ++M + S V N+L+++Y KCG +EEA VF ++ ++I+SW + I G+ QHG
Sbjct: 235 QLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHG 294
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE---EGKVYFDSMAKHGLKPELD 373
+A+ F M + ++P+ TF V++SC G V+ +G+++ + K G+ +
Sbjct: 295 DFKKALKQFSMMRESGIEPNEFTFSIVLASC---GCVKDFIDGRMFHTQVIKKGMASGVF 351
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++D+ G ++EA KQM + V W A
Sbjct: 352 VGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNA 387
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
RG A + L I G Y + L++ Y++C + +A K+F+++P N+ W + A
Sbjct: 821 RGRALHAHLVI-IGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGAC 879
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
A+ + L + M+ L PN F SIL AC G + H ++ F S
Sbjct: 880 ARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDA 939
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
+ ++LI MY KCG+VE+A VF+ + KD+V N+M++GYAQHG A+BL ++M +
Sbjct: 940 YIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQA 999
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
VKP+ +++ +I+ G F M +G++P++ ++ V+ + E
Sbjct: 1000 GVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEG 1059
Query: 392 RDFIKQM 398
D K+M
Sbjct: 1060 FDAFKEM 1066
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 114/271 (42%), Gaps = 10/271 (3%)
Query: 177 ITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN----SM 231
I + RV +D Y + + + + T + AA A + ++ +YR+ RN
Sbjct: 740 IRVLKNLRVCLDCYSTMKYISRITDRYIPTPLAAAAAMQSLINRA-NVYRVYRNISTHRT 798
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ + T+ + AL +GR+ H + +G A L+S Y +CG + A
Sbjct: 799 FQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNAR 858
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F+ + +I W + A+ G A+ F EM K+ ++P+ ++ +C H
Sbjct: 859 KLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLS 918
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA-RDF---IKQMPIYPNAVIW 407
G+ + K+ + + S ++ + + G +E+A R F + + + NA++
Sbjct: 919 DRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVS 978
Query: 408 EAAESRLLLEPECAATHVQLANLYAGVRCWD 438
A+ + E +Q A + V W+
Sbjct: 979 GYAQHGFVHEALBLVQKMQQAGVKPNVVSWN 1009
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 220/358 (61%), Gaps = 23/358 (6%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
SS++ Y++C I A K+F M R+V+SWTA+I+ ++Q Q LEL++ M ++
Sbjct: 285 SSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIK 344
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS-LISMYCKCGNVEEAVY 292
P++ T ++LSAC GA G+ + Q I G F+ + + ++ MY KCG+++ A+
Sbjct: 345 PDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALE 404
Query: 293 VFNNMHGKDIVS---WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
+F + GK++ + +NSMIAG AQHGL AI +F E++ +KPD +TF+GV+ +C H
Sbjct: 405 IFRRV-GKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGH 463
Query: 350 GGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
GL+EEGK F+SM +G+KP+++HY C+VDLLGR G LEEA D +++MP N+VIW
Sbjct: 464 SGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWR 523
Query: 409 A----------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKG 451
A A +LL +E + A +V L+N+ A W++A +VRK+M+D G
Sbjct: 524 ALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHG 583
Query: 452 LKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
++ PG S+IE+ ++RF A DKS+ + EI +L + ++K+ GYVP + D
Sbjct: 584 IRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFD 641
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 147/292 (50%), Gaps = 35/292 (11%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC ++ G I+ GF ++++V ++LI LYS + A +F+E VR++
Sbjct: 118 LNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDL 177
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VS+ +I +A+ Q + L L+ M+NS + P++FTF ++ S C+ G+ H Q
Sbjct: 178 VSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQ 237
Query: 262 TIR--MGFFSYIQVANSLISMYCKCG--NVEEAVY------------------------- 292
+ S I + ++++ MY KCG N+ E V+
Sbjct: 238 VYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEI 297
Query: 293 -----VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+FN+MH +D++SW +MI+GY+Q G A++LF+EM +KPD +T + V+S+C
Sbjct: 298 NVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSAC 357
Query: 348 RHGGLVEEGKVYFDSMAKHGL-KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G + GK + ++G+ + V+D+ + G ++ A + +++
Sbjct: 358 ARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV 409
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 6/269 (2%)
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS--KCRVIIDAYKV-FEEMPVRNVVS 203
S ++ + G I G ++ S LI+ +S + +D ++ F ++ N+
Sbjct: 18 SCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFM 77
Query: 204 WTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
W +I +++ + LY M+ + PN+FTF +L++C +L G H
Sbjct: 78 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 137
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
I+ GF S + V N+LI +Y GN+ A +F+ +D+VS+N+MI GYA+ A+
Sbjct: 138 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 197
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH--GLKPELDHYSCVVD 380
LF EM + PD TF+ + S C GK + K+ + + S +VD
Sbjct: 198 CLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVD 257
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + GL+ A M +A W +
Sbjct: 258 MYAKCGLINIAERVFSTMGTSKSAAAWSS 286
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 218/371 (58%), Gaps = 29/371 (7%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++++T ++ + A F++MP R+ VSWTA+I + Q + L L+R M+ + ++
Sbjct: 290 TAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349
Query: 234 PNDFTFTSILSACTGSGAL--GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
P++FT SIL+AC GAL G+ A+ + S+ V N+LI MY CGNVE+A+
Sbjct: 350 PDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSF--VGNALIDMYFNCGNVEKAI 407
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+FN M +D +SW ++I G A +G A+D+F +M+K + PD +T +GV+ +C H G
Sbjct: 408 RIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSG 467
Query: 352 LVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-- 408
+V++GK +F M +HG++P + HY C+VDLLGRAG L+EA + IK MP+ PN+++W
Sbjct: 468 MVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSL 527
Query: 409 ---------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
AA+ L LEPE A +V L N+YA W++ VRKLM D+G+K
Sbjct: 528 LGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIK 587
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP-------EVHEE 506
PGCS IE+ V+ F A D+ + + EI LD + +K GY P ++ EE
Sbjct: 588 KTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEE 647
Query: 507 KVDDASHKRTE 517
+ + A ++ +E
Sbjct: 648 EKESAVYRHSE 658
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ GF +NV+V ++LI LYS + A VF+ +VV+W +I+ + + Q D +
Sbjct: 146 VKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESM 205
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L+ M + P+ T S+LSAC+ L G+ H + + N+LI MY
Sbjct: 206 KLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMY 265
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY---AQHGLAVRAID--------------- 323
CG+++ A+ +F+NM +D++SW +++ G+ Q GLA D
Sbjct: 266 AACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMID 325
Query: 324 -------------LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG---KVYFDSMAKHG 367
LF EM +KPD T + ++++C H G +E G K Y D K+
Sbjct: 326 GYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYID---KNE 382
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+K + + ++D+ G +E+A MP + + + W A
Sbjct: 383 IKIDSFVGNALIDMYFNCGNVEKAIRIFNAMP-HRDKISWTA 423
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 2/239 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYK--VFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
I TG I+N V + +I K + Y VF+ MP N W +I +++ +
Sbjct: 43 ICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNS 102
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+ +Y M + P+++T+ +L T A+ GR H +++GF S + V N+LI
Sbjct: 103 AVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIH 162
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
+Y G V A VF+ D+V+WN MI+GY + ++ LF+EM + RV P +IT
Sbjct: 163 LYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSIT 222
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ V+S+C + GK + ++P + ++D+ G ++ A M
Sbjct: 223 LVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNM 281
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 139/308 (45%), Gaps = 23/308 (7%)
Query: 30 SFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHL------RLIQDFLQTDSKHL 83
S CS KLK ++ K +H+ ++ L I R ++ +++ + F S+ +
Sbjct: 228 SACS-KLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDV 286
Query: 84 DS-QKFNHDFTGTNSTFGSSNVFDQLLD------TPVVD-------VEKLISMHHDLHRE 129
S FT + N FD++ + T ++D ++++S+ ++
Sbjct: 287 ISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAA 346
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
+K D + + +T+C + G + + + +VG++LI +Y C + A
Sbjct: 347 NIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKA 406
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
++F MP R+ +SWTA+I A + L+++ M + + P++ T +L ACT S
Sbjct: 407 IRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHS 466
Query: 250 GALGQGRSAHCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNS 307
G + +G+ + T + G + ++ + + G+++EA V NM K + + W S
Sbjct: 467 GMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGS 526
Query: 308 MIAGYAQH 315
++ H
Sbjct: 527 LLGACRVH 534
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK--CGNVEEAVYVFNNM 297
T LS ++ Q + H QTI G S V +I+ CK G++E A VF+ M
Sbjct: 20 TPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTM 79
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
G + WN+MI GY++ G A+ ++ EM+++ V PD T+ ++ V+ G+
Sbjct: 80 PGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGR 139
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
D + K G + + ++ L +G + AR
Sbjct: 140 ELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVAR 174
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 220/390 (56%), Gaps = 19/390 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
K + + + ++ +D L A+ +C T ++ G L + GF N Y+GSSL
Sbjct: 178 NKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSL 237
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I++Y+KC + DA ++F+ MP RN V WT++I+ + Q Q ++L+R M+ + ++ +D
Sbjct: 238 ISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDD 297
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T ++++S+C GAL GR H G I V NSLI MY KCG++++A +F
Sbjct: 298 ATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCG 357
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEE 355
M +D SW +I G+A +GL+ A+DLF +M ++ V P+ ITFLGV++SC HGGLVE+
Sbjct: 358 MVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQ 417
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----- 409
G +F M+ +G+ P ++HY C+VDLLGRA LL EA FIK+MPI P+AV+W +
Sbjct: 418 GYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFAC 477
Query: 410 ------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AE +LEP V L+ +YA W A +VR + PG
Sbjct: 478 RTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRKTKQPG 537
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
CS+IE+ V+ F A D+S+ I L
Sbjct: 538 CSFIEVDGCVHEFFAGDESHFETEAIYSTL 567
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 133/270 (49%), Gaps = 2/270 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+ +D LS A+++ ++ GA L+++ G ++ +V ++LI +YS C A
Sbjct: 89 MPIDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTAR 148
Query: 191 KVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
V + P + VSW IIA + + L+ + M + +D T + L AC
Sbjct: 149 SVLDSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACAR 208
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ + G+ H + GF + +SLISMY KCG VE+A +F+ M ++ V W SM
Sbjct: 209 TCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSM 268
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I+GY Q G + AI LF +M VK D T V+SSC G ++ G+ HGL
Sbjct: 269 ISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGL 328
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++ + ++D+ + G +++A D M
Sbjct: 329 GKDISVKNSLIDMYSKCGDIKKAYDIFCGM 358
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 3/177 (1%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++++ ++ LS ++ G H ++++G S V N+LI+MY C A V
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 295 NNM--HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
++ D VSWN++IAGY GL +A+ F +M K +V D +T L + +C +
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCM 211
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ GK+ + +G + S ++ + + G +E+AR MP NAV W +
Sbjct: 212 MKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDR-NAVCWTS 267
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 220/393 (55%), Gaps = 25/393 (6%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C + G + G +VYVG+SLI LY+ C + A KVFE+MP+R++
Sbjct: 133 LKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPLRSL 192
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSW +I A+ Q + L+L+ M+NS EP+ +T SI+SAC G GAL G AH
Sbjct: 193 VSWNVMIDAYVQSGLFENALKLFVEMQNS-FEPDGYTMQSIVSACAGIGALSLGMWAHAY 251
Query: 262 TIRMGFFSY---IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
+R + + + +SL+ MY KCG++ A VF M D+ SWNSMI A HG
Sbjct: 252 VLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGRG 311
Query: 319 VRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A+ F +++ ++ P+++TF+GV+S+C HGG+V +G+ YFD M + ++P L+HY
Sbjct: 312 QAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVADGRKYFDMMVNDYKIEPRLEHYG 371
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-------AESRLLLEPECA-------- 421
C+VDLL R+G ++EA + + M I P+AVIW + + + L E A
Sbjct: 372 CLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACYKQNAGVELSEEVAFKILQSEK 431
Query: 422 ----ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
+V L+ +YA R W+ +RK+M D G+ PGCS IEI + + F A D S+
Sbjct: 432 TISSGVYVMLSRVYASARQWNDVGIIRKVMTDMGVTKEPGCSSIEIDGISHEFFAGDTSH 491
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
R+ EI V+D + ++++ GY P+ + + D
Sbjct: 492 PRIKEIYGVIDLIEEKLERRGYSPDCSQATMVD 524
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 121/249 (48%), Gaps = 12/249 (4%)
Query: 162 IRTGFIANVYVGSSLITLYSK---CRVIID---AYKVFEEMPVRNVVSWTAIIAAFAQEW 215
I I N +S + LYS+ +ID A +VF ++ N W +I A A+
Sbjct: 44 IHAQAIRNFSTHNSSLFLYSRILHVSSLIDFDYACRVFNQIDNPNSFMWNTLIGACARSL 103
Query: 216 -QVDMCLEL-YRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ + +E+ YRM+ +EP+ TF +L AC AL +GR AH Q ++G + V
Sbjct: 104 DRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDVYV 163
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
NSLI +Y CG + A+ VF M + +VSWN MI Y Q GL A+ LF E M+
Sbjct: 164 GNSLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVE-MQNSF 222
Query: 334 KPDAITFLGVISSCRHGGLVEEG---KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+PD T ++S+C G + G Y A + ++ S +VD+ + G L
Sbjct: 223 EPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRM 282
Query: 391 ARDFIKQMP 399
A+ + MP
Sbjct: 283 AQQVFETMP 291
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIR--------MGFFSYIQVANSLISMYCKCGNVEEA 290
F +L+ CT L Q H Q IR + +S I +SLI + + A
Sbjct: 28 FLHLLTDCTDLSKLKQ---IHAQAIRNFSTHNSSLFLYSRILHVSSLI-------DFDYA 77
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQH-GLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCR 348
VFN + + WN++I A+ +AI++F M+++ V+PD TF ++ +C
Sbjct: 78 CRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACA 137
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ + EG+ + K GL ++ + ++ L G L A ++MP+
Sbjct: 138 YVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPL 189
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 231/421 (54%), Gaps = 29/421 (6%)
Query: 126 LHRERL-KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
LH RL D + +C ++R G A + G V+V +SL+ LY C
Sbjct: 108 LHARRLAPPDTHTYPPLLQACARLLSLRHGERIHAEAAKNGLATLVFVKNSLVHLYGACG 167
Query: 185 VIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
+ A++VF+E+PV RN+VSW +++ FA + + L ++R M + P+ FT S+
Sbjct: 168 LFESAHRVFDEIPVGERNLVSWNSMLNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSV 227
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KD 301
L+A GAL GR H ++G V N+LI +Y KCG VE+A VF M +
Sbjct: 228 LTASAEIGALALGRRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDARRVFEEMGARRT 287
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+VSW S+I G A +G A++LF M ++++ P IT +GV+ +C H GLV++G +YF+
Sbjct: 288 VVSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMVGVLYACSHCGLVDDGFMYFN 347
Query: 362 SMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------- 407
M ++ + P ++H C+VDLLGRAG ++EA D+I MP+ PNAV+W
Sbjct: 348 RMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMPLEPNAVVWRTLLGACAMHKKL 407
Query: 408 ---EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
EAA +RL+ L+P + +V L+NLYA V W +RK M G++ NPG S +E+
Sbjct: 408 ELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVKDGVRKNPGRSLVEL 467
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRT 516
N VY F D+S+ +I +L + D ++ GY+P ++ EE+ + A + +
Sbjct: 468 RNSVYEFVMGDRSHPESEQIYQMLAEVADSLRREGYIPRTSNVLADIEEEEKETALNYHS 527
Query: 517 E 517
E
Sbjct: 528 E 528
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 222/385 (57%), Gaps = 18/385 (4%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
K D+ +++ V++C +N+ G LAI++G +V+V SSL+ +YSK +
Sbjct: 455 KPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGN 514
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF +MP++N+V+W +II+ + + D+ + L+ M L P+ + TS+L + +
Sbjct: 515 VFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAV 574
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L +G++ H IR S +Q+ N+LI MY KCG ++ A ++F NM ++V+WN MIAG
Sbjct: 575 LRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAG 634
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKP 370
HG ++A+ LF+EM + PD ITF+ +++SC H G +EEG F M +HG++P
Sbjct: 635 CGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEP 694
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESR 413
++HY +VDLLGRAG L++A F+K +PI P+ IW AA
Sbjct: 695 RMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKL 754
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
L +EP + +VQL NLY D+AA +R MK+KGLK PGCSWIE+ N + F +
Sbjct: 755 LDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFSG 814
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLG 498
D S+ R EI +L+ L M+ G
Sbjct: 815 DSSSPRTIEIYDLLNSLRRNMRKKG 839
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 151/277 (54%), Gaps = 2/277 (0%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
V ASF ST +++C + G C ++ GF + YV +SL+T+YSKC+++ DA V
Sbjct: 255 VSASFTST-LSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENV 313
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+++ V+ W A+I+A+ + L++Y+ M+ + P+ T T++LS+C G+
Sbjct: 314 FDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSY 373
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
GR H + ++ S + + ++L++MY KCGN ++A +FN + G+D+V+W SMI+G+
Sbjct: 374 DFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGF 433
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+ + A++ + M KPD+ V+S+C V G K GL+ ++
Sbjct: 434 CQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDV 493
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S +VD+ + + + + MP+ N V W +
Sbjct: 494 FVASSLVDMYSKFNFPKMSGNVFSDMPL-KNLVAWNS 529
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 126/233 (54%), Gaps = 1/233 (0%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDM 219
++R F + ++ S LI +Y C +DA+++F+E+ + NVV+W +I F + +
Sbjct: 180 SVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWEN 239
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
LE+Y + +N ++ +FTS LSAC + G HC +++GF + V SL++
Sbjct: 240 SLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLT 299
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY KC VE+A VF+ + K WN+MI+ Y +G + + ++++M ++ PD++T
Sbjct: 300 MYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLT 359
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
V+SSC G + G++ + K ++ + S ++ + + G ++A
Sbjct: 360 ATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDAN 412
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 130/241 (53%), Gaps = 1/241 (0%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
+NV + S+L+T+YSKC DA +F + R+VV+W ++I+ F Q + LE Y M
Sbjct: 390 SNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSM 449
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+P+ S++SACTG + G + H I+ G + VA+SL+ MY K
Sbjct: 450 TVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFP 509
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ + VF++M K++V+WNS+I+ Y ++GL +I LF +M + + PD+++ V+ S
Sbjct: 510 KMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSV 569
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ +GK + + + +L + ++D+ + G L+ A+ + M + N V W
Sbjct: 570 SSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNM-LQTNLVTW 628
Query: 408 E 408
Sbjct: 629 N 629
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 14/279 (5%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ + +CG N++ G I GF ++ Y+ +SLI Y KC +A KVF+++P
Sbjct: 54 SLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPE 113
Query: 199 -----RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
++V W +I+ + + + + M+ + P+ ++ +L A G LG
Sbjct: 114 SEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGA--SDGHLG 171
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGY 312
+ H ++R F+ + + LI MY CG +A +F + K ++V+WN MI G+
Sbjct: 172 YAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGF 231
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
++GL +++++ + VK + +F +S+C G V G + K G E
Sbjct: 232 GENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGF--EN 289
Query: 373 DHYSC--VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
D Y C ++ + + L+E+A + Q+ + +W A
Sbjct: 290 DPYVCTSLLTMYSKCKLVEDAENVFDQVSV-KKTELWNA 327
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I Q+ Q L+ Y RN L FT+ S+L AC L G++ H I GF
Sbjct: 24 IVTLVQQGQYVDALQFYS--RNP-LNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGF 80
Query: 268 F-SYIQVANSLISMYCKCGNVEEAVYVFNNM-----HGKDIVSWNSMIAGYAQHGLAVRA 321
F S + SLI+ Y KCG+ AV VF+ + G+D+ WNS++ GY + G
Sbjct: 81 FYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEG 140
Query: 322 IDLFEEMMKQRVKPDAITF 340
I F M V+PDA +
Sbjct: 141 IAQFCRMQLFGVRPDAYSL 159
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 233/403 (57%), Gaps = 19/403 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D ++T V++C +++ G +GS+L+ +Y+KC + A +VF
Sbjct: 179 DEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVF 238
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGAL 252
+++ ++V +W+A+I + + + L+L+R + S + PN+ T +++SAC G L
Sbjct: 239 DQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDL 298
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
GR H R + + NSLI M+ KCG+++ A +F++M KD++SWNSM+ G
Sbjct: 299 ETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGL 358
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG-KVYFDSMAKHGLKPE 371
A HGL A+ F M ++PD ITF+GV+++C H GLV+EG K++++ A +G++ +
Sbjct: 359 ALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLK 418
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRL 414
+HY C+VDLL RAGLL EAR+FI+ MP+ P+ IW EAA L
Sbjct: 419 SEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLL 478
Query: 415 LLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
LEP ++ L+N+YA + W++ +VR+LM +KG++ PGCS + I N+ + F A D
Sbjct: 479 ELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGD 538
Query: 475 KSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
S+ ++EI +L + +++K +GYV + E ++ +K+ E
Sbjct: 539 CSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEE 581
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 142/292 (48%), Gaps = 2/292 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L R R D + + C + G ++ +++Y+ ++L+ +Y+ C
Sbjct: 70 LERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGD 129
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A +FE M RN V WT++I+ + + + L LY+ M P++ T +++SA
Sbjct: 130 LKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSA 189
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C LG G H M + ++L++MY KCG+++ A VF+ + KD+ +W
Sbjct: 190 CAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAW 249
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
+++I GY ++ + A+ LF E+ ++P+ +T L VIS+C G +E G+ D +
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ + + ++D+ + G ++ A+ M Y + + W + + L L
Sbjct: 310 RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMS-YKDLISWNSMVNGLAL 360
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACT 247
AY VF V +V++W +++ AF L+ Y M+ S P+ FTF S+L C
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G+ H Q ++ S + + +L++MY CG+++ A ++F M ++ V W S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI+GY ++ A+ L+++M + PD +T ++S+C E K M H
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC------AELKDLGVGMKLHS 204
Query: 368 LKPELDHYSC------VVDLLGRAGLLEEARDFIKQM 398
E+D C +V++ + G L+ AR Q+
Sbjct: 205 HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQL 241
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 200/350 (57%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV +++IT Y++ I A F+ MP R+ +SW AIIA +AQ + L L+ M+
Sbjct: 246 NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMK 305
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N TFTS LS C AL G+ H + ++ G S V N+L+ MYCKCGN++
Sbjct: 306 RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNID 365
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A VF + K++VSWN+MIAGYA+HG A+ LFE M K + PD +T +GV+S+C
Sbjct: 366 DAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACS 425
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV++G YF SM + +G+ HY+C++DLLGRAG L++A++ +K MP P+A W
Sbjct: 426 HTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATW 485
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
+AA+ +EP+ + +V L+NLYA W R+R M+D+
Sbjct: 486 GALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDR 545
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G+K PG SW+E+ N ++ F D + I L+ L +MK GYV
Sbjct: 546 GVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYV 595
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 105/200 (52%), Gaps = 16/200 (8%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++I+ Y++ +++A ++FEE PVR+V +WTA+++ + Q +D ++ + M E
Sbjct: 158 NTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVF----DGMPE 213
Query: 234 PNDFTFTSILSACTGSGALGQGR----SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
N ++ +I++ + Q R + CQ + N++I+ Y + G++ +
Sbjct: 214 KNSVSWNAIIAGYVQCKRMDQARELFEAMPCQN--------VSSWNTMITGYAQNGDIAQ 265
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A F+ M +D +SW ++IAGYAQ G A+ LF EM + + + TF +S+C
Sbjct: 266 ARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAE 325
Query: 350 GGLVEEGKVYFDSMAKHGLK 369
+E GK + K GL+
Sbjct: 326 IAALELGKQVHGRVVKAGLE 345
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 5/217 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + ++ R+ +++ S ++ +++C + G ++ G + YVG++L
Sbjct: 295 EEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNAL 354
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC I DAY VFE + + VVSW +IA +A+ L L+ M+ + + P+D
Sbjct: 355 LVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDD 414
Query: 237 FTFTSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T +LSAC+ +G + +G + T G + + +I + + G +++A +
Sbjct: 415 VTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMK 474
Query: 296 NM-HGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEM 328
NM D +W +++ HG L +A + EM
Sbjct: 475 NMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 511
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y K ++DA +F+ MP R+ VSW +I+ +AQ ++ LE R+ S + + FT+
Sbjct: 133 YVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGEL---LEAQRLFEESPVR-DVFTW 188
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
T+++S +G L + R S+ N++I+ Y +C +++A +F M
Sbjct: 189 TAMVSGYVQNGMLDEARRVFDGMPEKNSVSW----NAIIAGYVQCKRMDQARELFEAMPC 244
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+++ SWN+MI GYAQ+G +A + F+ M ++ D+I++ +I+ G EE
Sbjct: 245 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQR----DSISWAAIIAGYAQSGYGEEALHL 300
Query: 360 FDSMAKHG 367
F M + G
Sbjct: 301 FVEMKRDG 308
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 20/210 (9%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F++MP R+VVSW A+++ +AQ V E++ + M N ++ +L+A +G
Sbjct: 52 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIF----DEMPCKNSISWNGMLAAYVQNGR 107
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ R S+ N ++ Y K + +A +F+ M +D VSWN+MI+G
Sbjct: 108 IEDARRLFESKADWELISW----NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISG 163
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
YAQ+G + A LFEE + D T+ ++S G+++E + FD M PE
Sbjct: 164 YAQNGELLEAQRLFEESPVR----DVFTWTAMVSGYVQNGMLDEARRVFDGM------PE 213
Query: 372 LDHYSCVVDLLG--RAGLLEEARDFIKQMP 399
+ S + G + +++AR+ + MP
Sbjct: 214 KNSVSWNAIIAGYVQCKRMDQARELFEAMP 243
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 43/254 (16%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY--------- 224
+++++ Y++ + +A ++F+EMP +N +SW ++AA+ Q +++ L+
Sbjct: 65 NAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELI 124
Query: 225 ------------------RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
R + + M E ++ ++ +++S +G L + + ++
Sbjct: 125 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRD 184
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
F++ +++S Y + G ++EA VF+ M K+ VSWN++IAGY Q +A +LFE
Sbjct: 185 VFTW----TAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFE 240
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA- 385
M Q V ++ +I+ G + + + +FD M P+ D S + G A
Sbjct: 241 AMPCQNVS----SWNTMITGYAQNGDIAQARNFFDRM------PQRDSISWAAIIAGYAQ 290
Query: 386 -GLLEEARDFIKQM 398
G EEA +M
Sbjct: 291 SGYGEEALHLFVEM 304
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 77/138 (55%), Gaps = 12/138 (8%)
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
N+ A +F+ M +D+VSWN+M++GYAQ+G A ++F+EM + ++I++ G+++
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLA 100
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IY 401
+ G +E+ + F+S A EL ++C++ + L +AR +MP +
Sbjct: 101 AYVQNGRIEDARRLFESKADW----ELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVS 156
Query: 402 PNAVIWEAAESRLLLEPE 419
N +I A++ LLE +
Sbjct: 157 WNTMISGYAQNGELLEAQ 174
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 242/453 (53%), Gaps = 57/453 (12%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + ++ + +K + + +++C + G R ++ + +++
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAM 278
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML---- 232
+ +Y+KC + DA ++F++MP +++VSWT ++ +A+ + D ++ M N +
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWN 338
Query: 233 ----------------------------EPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+P++ T S LSAC GA+ G H +
Sbjct: 339 ALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKK 398
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G + SLI MYCKCG++++A+ VF+++ KD+ W++MIAG A HG AI L
Sbjct: 399 QGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIAL 458
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLG 383
F +M + +VKP+A+TF ++ +C H GLVEEG+ +F+ M +G+ P + HY+C+VD+LG
Sbjct: 459 FSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILG 518
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQ 426
RAGLLEEA + I++MP+ P A +W E A S+L+ LEP +V
Sbjct: 519 RAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVL 578
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
L+N+YA WD+ + +RKLM+D GLK PGCS IE+ +V+ F D S+ +I
Sbjct: 579 LSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAK 638
Query: 487 LDFLVDQMKTLGYVPE-------VHEEKVDDAS 512
LD +V +++T+GYVP V EE V + +
Sbjct: 639 LDEIVARLETIGYVPNKSHLLQLVEEEDVKEQA 671
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 32/270 (11%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G + + I+ ++V++ +SLI Y+KC + Y+VF +P R+VVSW ++I AF Q
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQ 214
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ LEL++ M ++PN T +LSAC GR H R + +
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTL 274
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA-------------------- 313
+N+++ MY KCG+VE+A +F+ M KDIVSW +M+ GYA
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDI 334
Query: 314 -----------QHGLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
Q G A++LF E+ + + KPD +T + +S+C G ++ G
Sbjct: 335 AAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHV 394
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ K G+K + ++D+ + G L++A
Sbjct: 395 YIKKQGMKLNCHLTTSLIDMYCKCGDLQKA 424
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMPVR 199
+ C T+ ++ +RTG + + S LIT S + A +VF+++P
Sbjct: 42 IDQCSETKQLK---QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
N+ +W +I A+A L ++ RM+ S P+ FTF ++ A + L G++
Sbjct: 99 NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H I++ S + + NSLI Y KCG + VF N+ +D+VSWNSMI + Q G
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A++LF+EM Q VKP+ IT +GV+S+C E G+ + ++ + L + +
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAM 278
Query: 379 VDLLGRAGLLEEARDFIKQMP 399
+D+ + G +E+A+ +MP
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMP 299
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 235/423 (55%), Gaps = 26/423 (6%)
Query: 110 DTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN 169
D+P +K + ++ D+ R + D S AV SC + GG C + G +
Sbjct: 83 DSP----QKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDGHQWD 138
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
+ ++++ LYS C+ DA KVF+EMP R+ V+W +I+ + + L L+ +M+
Sbjct: 139 TLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQG 198
Query: 230 SML--EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
S EP+D T +L AC AL G H + G+ + + NSLISMY +CG +
Sbjct: 199 SSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCGCL 258
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
++A VF M K++VSW++MI+G A +G AI+ FEEM++ V PD TF GV+S+C
Sbjct: 259 DKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSAC 318
Query: 348 RHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
+ G+V+EG +F M++ G+ P + HY C+VDLLGRAGLL++A I M + P++ +
Sbjct: 319 SYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTM 378
Query: 407 W----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
W E L+ L+ + A +V L N+Y+ W++ A VRKLMK+
Sbjct: 379 WRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKN 438
Query: 450 KGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE--K 507
K ++T PGCS IE+ V+ F +D S++R EI LD + Q++ GYV E+ E K
Sbjct: 439 KSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSSELHK 498
Query: 508 VDD 510
+DD
Sbjct: 499 MDD 501
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 232/421 (55%), Gaps = 37/421 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGS 147
S +F Q+ + +V + LI+ + + ++ LK + S+ ++ C
Sbjct: 581 SRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSG 640
Query: 148 TRNIRGGAPYQCLAIRTGFIAN-VYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWT 205
+ N G C +++G + + +G SL +Y K +++ DA K+ EMP +N+ WT
Sbjct: 641 SLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWT 700
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
AII+ +AQ D L + MR+ + ++ TF S+L AC+ A G+ H +
Sbjct: 701 AIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKS 760
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDL 324
GF SY ++LI MY KCG+V + F + K DI+ WNSMI G+A++G A A+ L
Sbjct: 761 GFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLL 820
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLG 383
F++M + ++KPD +TFLGV+ +C H GL+ EG+ +F SM K +GL P LDHY+C +DLLG
Sbjct: 821 FQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLG 880
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQ 426
R G L+EA++ I Q+P P+ V+W AA + LEP+ ++T+V
Sbjct: 881 RGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVL 940
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK---SNTRLSEI 483
L++L+A W +A R+ M++KG+ PGCSWI + N F +DK N R+ E+
Sbjct: 941 LSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEM 1000
Query: 484 L 484
L
Sbjct: 1001 L 1001
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 147/293 (50%), Gaps = 4/293 (1%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
++ ++ D+ L S ++ +++ + + G A+ G ANV+VGSSLI
Sbjct: 308 NVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLI 367
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
LY+KC DA VF+ +N+V W A++ F Q + + +++ M L+ ++F
Sbjct: 368 NLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF SIL ACT + G+ HC TI+ + VAN+ + MY K G + +A +F+ +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
KD +SWN++ G AQ+ A+ + + M + PD ++F I++C + E GK
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM---PIYP-NAVI 406
K+G+ S ++DL + G +E +R Q+ I P NA+I
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALI 600
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 5/296 (1%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I M + R L+ D + + +C + G C+ I+ +++V ++
Sbjct: 408 EEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT 467
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +YSK I DA +F +P ++ +SW A+ AQ + + + + + MR + P+D
Sbjct: 468 LDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDD 527
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+F++ ++AC+ A G+ HC I+ G S V +SLI +Y K G+VE + +F
Sbjct: 528 VSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQ 587
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ IV N++IAG+ Q+ AI LF++++K +KP ++TF ++S C G
Sbjct: 588 VDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIG 647
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLG---RAGLLEEARDFIKQMPIYPNAVIWEA 409
K K G+ D V L G ++ +LE+A + +MP + N W A
Sbjct: 648 KQVHCYTLKSGVL--YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTA 701
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 3/278 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D SF STA+ +C + R G CLAI+ G +N VGSSLI LYSK + + K+F
Sbjct: 527 DVSF-STAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 585
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
++ ++V A+IA F Q D ++L++ + L+P+ TF+SILS C+GS
Sbjct: 586 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 645
Query: 254 QGRSAHCQTIRMG-FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAG 311
G+ HC T++ G + + SL +Y K +E+A + M K++ W ++I+G
Sbjct: 646 IGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
YAQ+G ++ F M V+ D TF V+ +C +GK + K G
Sbjct: 706 YAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSY 765
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S ++D+ + G + + + K++ + + W +
Sbjct: 766 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 803
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A + ++MP + V+W A+I+ AQ L LY+ MR+ L P TF S+LSA
Sbjct: 278 ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAAN 337
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A +G+ H + G + + V +SLI++Y KCG +A VF+ K+IV WN+M
Sbjct: 338 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAM 397
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ G+ Q+ L AI +F+ MM+ ++ D TF+ ++ +C + GK K+ +
Sbjct: 398 LTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 457
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L + +D+ + G + +A+ +P Y +++ W A
Sbjct: 458 DISLFVANATLDMYSKYGAIGDAKALFSLIP-YKDSISWNA 497
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 122/290 (42%), Gaps = 52/290 (17%)
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
R +RGG+P L R +G SL+ LY K + A+ R + ++++
Sbjct: 81 RILRGGSP---LLGR--------LGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 209 AAFAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
+ A+ L +R +R + P+ F +LSAC+ G L GR HC ++ GF
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 189
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
S + +L+ MY KCG+V A VF+ + D + W+SMIA Y + G A+ LF
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 249
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M K PD +T + +IS+ L +G
Sbjct: 250 MDKMGSAPDQVTLVTIIST-----------------------------------LASSGR 274
Query: 388 LEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCW 437
L+ A +K+MP P+ V W A ++ + + LY +R W
Sbjct: 275 LDHATALLKKMPT-PSTVAWNA----VISGHAQSGLEFNVLGLYKDMRSW 319
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ +++C + G C +++GF ++V+ ++L+ +Y+KC + +A +VF+ +
Sbjct: 161 LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIA 220
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ + W+++IA + + L L+ M P+ T +I+S SG L
Sbjct: 221 CPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRL----- 275
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+ A + M V+WN++I+G+AQ GL
Sbjct: 276 ------------------------------DHATALLKKMPTPSTVAWNAVISGHAQSGL 305
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ L+++M + P TF ++S+ + EG+ + HGL + S
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 365
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+++L + G +A++ + + N V+W A
Sbjct: 366 LINLYAKCGCPSDAKN-VFDLSCEKNIVMWNA 396
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R+ H + +R G ++ +SL+ +YCK G V A + + +S+++ +A+
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 316 GLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
G + F + +PD V+S+C G++ G+ + K G +
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD+ + G + AR + P+ + W +
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIAC-PDTICWSS 229
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 233/447 (52%), Gaps = 75/447 (16%)
Query: 146 GSTRNI--RGGAPYQCLAIRTGFIANVYVGSSLITLYSKC------RVIID--------- 188
G TR++ + G C ++ G +NV+ ++LI +YS C R I D
Sbjct: 123 GFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVT 182
Query: 189 ---------------------------------AYKVFEEMPVRNVVSWTAIIAAFAQEW 215
A K F +MP R+ VSWTA+I + +
Sbjct: 183 WNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLN 242
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
L L+R M+ S ++P++FT S+L+AC GAL G + + V N
Sbjct: 243 CYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGN 302
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
+LI MY KCGNVE A+ +FN + +D +W +M+ G A +G A+++F +M+K V P
Sbjct: 303 ALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTP 362
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
D +T++GV+S+C H G+V+EGK +F SM A+HG++P + HY C+VDLLG+AG L+EA +
Sbjct: 363 DEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEI 422
Query: 395 IKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCW 437
IK MP+ PN+++W A E L LEP A +V N+YA W
Sbjct: 423 IKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKW 482
Query: 438 DQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
D+ +R++M D+G+K PGCS IE+ +V+ F A D+S+ + EI L+ + +K
Sbjct: 483 DKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIA 542
Query: 498 GYVP-------EVHEEKVDDASHKRTE 517
GY P ++ EE ++A ++ +E
Sbjct: 543 GYSPNTSEVFLDIAEEDKENAVYRHSE 569
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 30/242 (12%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIID---AYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
I+TG I N + + +++ + R D A ++F+ +P +V SW + +++
Sbjct: 38 IKTGIICNPIIQNKILS-FCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPK 96
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+ + LY M ++P+ +T+ + T S AL GR HC ++ G S + N+LI
Sbjct: 97 LGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALI 156
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
+MY CG ++ A +F+ D+V+WN+MI+GY R+K D I
Sbjct: 157 NMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGY------------------NRIKKDVI 198
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH--YSCVVDLLGRAGLLEEARDFIK 396
++ +++ + G V+ + YF M PE DH ++ ++D R +EA +
Sbjct: 199 SWTAIVTGFVNTGQVDAARKYFHKM------PERDHVSWTAMIDGYLRLNCYKEALMLFR 252
Query: 397 QM 398
+M
Sbjct: 253 EM 254
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 100/209 (47%), Gaps = 5/209 (2%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ ++K D + + +T+C + G + + + +VG++LI +Y KC
Sbjct: 253 EMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCG 312
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ A +F +P R+ +WTA++ A + L ++ M + + P++ T+ +LS
Sbjct: 313 NVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLS 372
Query: 245 ACTGSGALGQGRSAHCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DI 302
ACT +G + +G+ T R G I ++ + K G+++EA + NM K +
Sbjct: 373 ACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNS 432
Query: 303 VSWNSMIAGYAQHG---LAVRAIDLFEEM 328
+ W +++ H +A RAI+ E+
Sbjct: 433 IVWGALLGACRIHKDAEMAERAIEQILEL 461
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 200/350 (57%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+ +++IT Y + I A K F+ MP R+ VSW AIIA +AQ + L ++ ++
Sbjct: 327 NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIK 386
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N TF LS C AL G+ H Q ++MG+ + V N+L++MY KCG+++
Sbjct: 387 QDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSID 446
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA F + KD+VSWN+M+AGYA+HG +A+ +FE M VKPD IT +GV+S+C
Sbjct: 447 EANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACS 506
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GL++ G YF SM K +G+ P HY+C++DLLGRAG LEEA+D I+ MP P A W
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASW 566
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
+AAE +EP+ + +V L+NLYA W A ++R M+D
Sbjct: 567 GALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDI 626
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G++ PG SW+E+ N ++ F D S+ I L+ L +M+ GYV
Sbjct: 627 GVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYV 676
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 117/224 (52%), Gaps = 16/224 (7%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++T Y + + DA ++F+ MP ++VVSW ++++ +AQ VD E++ ++M E N
Sbjct: 117 MLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVF----DNMPEKN 172
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++ +L+A +G + + S+ N L+ + + + +A ++F+
Sbjct: 173 SISWNGLLAAYVHNGRIEEACLLFESKSDWDLISW----NCLMGGFVRKKKLGDARWLFD 228
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M +D +SWN+MI+GYAQ G +A LF+E + D T+ ++S G+++E
Sbjct: 229 KMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR----DVFTWTAMVSGYVQNGMLDE 284
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K +FD M + K E+ Y+ ++ + ++ AR+ + MP
Sbjct: 285 AKTFFDEMPE---KNEVS-YNAMIAGYVQTKKMDIARELFESMP 324
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 108/220 (49%), Gaps = 5/220 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++M ++ ++ ++ + A+++C + G A++ G+ +VG++L
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNAL 435
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC I +A FE + ++VVSW ++A +A+ L ++ M+ + ++P++
Sbjct: 436 LAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDE 495
Query: 237 FTFTSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T +LSAC+ +G L +G + T G + +I + + G +EEA +
Sbjct: 496 ITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIR 555
Query: 296 NMHGK-DIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQ 331
NM + SW +++ HG L +A ++ +M Q
Sbjct: 556 NMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ 595
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 43/240 (17%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF MP R+ VS+ A+I+ + + + ++ L+ + M E + F++ +L+
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF----DQMPERDLFSWNVMLTGYVR 123
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ LG R S+ NSL+S Y + G V+EA VF+NM K+ +SWN +
Sbjct: 124 NCRLGDARRLFDLMPEKDVVSW----NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGL 179
Query: 309 IAGYAQHGLAVRAIDLFEE-----------MMKQRVKP----------------DAITFL 341
+A Y +G A LFE +M V+ DAI++
Sbjct: 180 LAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG--RAGLLEEARDFIKQMP 399
+IS GG + + + FD P D ++ + G + G+L+EA+ F +MP
Sbjct: 240 TMISGYAQGGGLSQARRLFDE------SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+V+ +++++ Y + ++ +A F+EMP +N VS+ A+IA + Q ++D+ EL+ M
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESM- 323
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
C+ I N++I+ Y + G++
Sbjct: 324 ------------------------------PCRN--------ISSWNTMITGYGQIGDIA 345
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A F+ M +D VSW ++IAGYAQ G A+++F E+ + + TF +S+C
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+E GK K G + ++ + + G ++EA D
Sbjct: 406 DIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAND 450
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 13/137 (9%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N IS + + G+ + A++VFN M + VS+N+MI+GY ++ A +LF++M ++ +
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF 112
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA--GLLEEAR 392
+ G + +CR G + + FD L PE D S L G A G ++EAR
Sbjct: 113 SWNVMLTGYVRNCRLG----DARRLFD------LMPEKDVVSWNSLLSGYAQNGYVDEAR 162
Query: 393 DFIKQMPIYPNAVIWEA 409
+ MP N++ W
Sbjct: 163 EVFDNMP-EKNSISWNG 178
>gi|18873857|gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat domain containing protein [Oryza
sativa Japonica Group]
Length = 391
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 213/359 (59%), Gaps = 18/359 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I++G ++ +V S+++ +Y KC +I +A K+ + + + VVSW AI++ F+ + +
Sbjct: 7 IKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQ 66
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+ + M + L+P+ FTF ++L C + G+ H Q I+ ++++L+ MY
Sbjct: 67 KFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMY 126
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++ +++ VF + +D VSWN+MI GYA HGL V A+ +FE M K+ V P+ TF+
Sbjct: 127 AKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFV 186
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
V+ +C H GL ++G YF M H L+P+L+H++C+VD+LGR+ +EA FI MP
Sbjct: 187 AVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPF 246
Query: 401 YPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
+AVIW+ AA + LLL+P+ ++ ++ L+N+YA W +R
Sbjct: 247 QADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRT 306
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
R+L+K LK PGCSWIE+ + ++ F DK++ R E+ +L+ L+ +MK GY P+
Sbjct: 307 RRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPD 365
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + I+ G S VA++++ MYCKCG ++EA + + + G+ +VSWN++++G++ + +
Sbjct: 3 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKES 62
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A F EM+ +KPD TF V+ +C + +E GK + K + + S +
Sbjct: 63 EEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTL 122
Query: 379 VDLLGRAGLLE---------EARDFI 395
VD+ + G + E RDF+
Sbjct: 123 VDMYAKCGDMPDSLLVFEKVEKRDFV 148
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
LK D +T + +C + I G I+ + + Y+ S+L+ +Y+KC + D+
Sbjct: 77 LKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSL 136
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VFE++ R+ VSW A+I +A L ++ M+ + PN TF ++L AC+ G
Sbjct: 137 LVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVG 196
Query: 251 ALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSM 308
G R H T ++ ++ + + +EAV N+M + D V W ++
Sbjct: 197 LFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTL 256
Query: 309 IA 310
++
Sbjct: 257 LS 258
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 241/439 (54%), Gaps = 31/439 (7%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLIS---MHHDLHR----------ERLKVDASFL 138
++ + + +FD++ D +V +IS + D H+ E + + L
Sbjct: 172 YSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITL 231
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+T ++ C ++ G + L +N+ V ++++ +Y KC + D VF+ M
Sbjct: 232 ATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMAR 291
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+VV+W+A+IA +AQ + + LEL+ M+++ ++PND T S+LSAC G++ G
Sbjct: 292 RDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERI 351
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
G S + VA++L+ MY KCGN+ +A +F+ + +D V+WNSMI G A +G A
Sbjct: 352 GSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFA 411
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSC 377
AI L+ M + VKP+ ITF+G++++C H G VE G +F SM + H + P ++H++C
Sbjct: 412 EDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFAC 471
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPEC 420
+VDL R+G L +A +FI +M + PN VIW E A +LL LEP+
Sbjct: 472 IVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDN 531
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+ +V L+N+YA W +A +VRKLMKDK ++ SW+E+ + V++F D S+ R
Sbjct: 532 SGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRS 591
Query: 481 SEILPVLDFLVDQMKTLGY 499
E+ +D L +GY
Sbjct: 592 DEVYSTIDGLALLSTWVGY 610
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 32/315 (10%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK--- 182
+H+ +++ + SC S I G L IR GF ++V+ ++LI Y+K
Sbjct: 87 MHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKIND 146
Query: 183 --------------------CRV--------IIDAYKVFEEMPVRNVVSWTAIIAAFAQE 214
C + ++ A ++F++M R++VSW A+I+ +AQ
Sbjct: 147 LGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQN 206
Query: 215 WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
+++ M++ M EPN+ T ++LS C G L G S + V+
Sbjct: 207 GDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVS 266
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
+++ MY KCG V++ VF++M +D+V+W++MIAGYAQ+G + A++LFE M ++K
Sbjct: 267 TAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIK 326
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
P+ +T + V+S+C G VE G+ + GL + S ++ + + G + +AR
Sbjct: 327 PNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQI 386
Query: 395 IKQMPIYPNAVIWEA 409
++P N V W +
Sbjct: 387 FDKLPQRDN-VTWNS 400
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 96/201 (47%), Gaps = 4/201 (1%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF+++P + + I A+++ + L + M + + FT I +C
Sbjct: 49 ARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCAS 108
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A+ G+ H IR GF S + N+LI+ Y K ++ A +F+ + KD +++N +
Sbjct: 109 LLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCL 168
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I+ Y++ G + A +LF++M + + +++ +IS G +G + F M
Sbjct: 169 ISAYSRSGEVLAARELFDKMRDRSI----VSWNAMISCYAQNGDYHKGWIIFQRMQDEMC 224
Query: 369 KPELDHYSCVVDLLGRAGLLE 389
+P + V+ + + G LE
Sbjct: 225 EPNEITLATVLSICAKLGDLE 245
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 232/421 (55%), Gaps = 37/421 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGS 147
S +F Q+ + +V + LI+ + + ++ LK + S+ ++ C
Sbjct: 591 SRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSG 650
Query: 148 TRNIRGGAPYQCLAIRTGFIAN-VYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWT 205
+ N G C +++G + + +G SL +Y K +++ DA K+ EMP +N+ WT
Sbjct: 651 SLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWT 710
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
AII+ +AQ D L + MR+ + ++ TF S+L AC+ A G+ H +
Sbjct: 711 AIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKS 770
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDL 324
GF SY ++LI MY KCG+V + F + K DI+ WNSMI G+A++G A A+ L
Sbjct: 771 GFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLL 830
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLG 383
F++M + ++KPD +TFLGV+ +C H GL+ EG+ +F SM K +GL P LDHY+C +DLLG
Sbjct: 831 FQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLG 890
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQ 426
R G L+EA++ I Q+P P+ V+W AA + LEP+ ++T+V
Sbjct: 891 RGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVL 950
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK---SNTRLSEI 483
L++L+A W +A R+ M++KG+ PGCSWI + N F +DK N R+ E+
Sbjct: 951 LSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEM 1010
Query: 484 L 484
L
Sbjct: 1011 L 1011
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 141/281 (50%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
++ ++ D+ L S ++ +++ + + G A+ G ANV+VGSSLI
Sbjct: 318 NVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLI 377
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
LY+KC DA VF+ +N+V W A++ F Q + + +++ M L+ ++F
Sbjct: 378 NLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 437
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF SIL ACT + G+ HC TI+ + VAN+ + MY K G + +A +F+ +
Sbjct: 438 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 497
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
KD +SWN++ G AQ+ A+ + + M + PD ++F I++C + E GK
Sbjct: 498 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 557
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
K+G+ S ++DL + G +E +R Q+
Sbjct: 558 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV 598
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 5/296 (1%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I M + R L+ D + + +C + G C+ I+ +++V ++
Sbjct: 418 EEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT 477
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +YSK I DA +F +P ++ +SW A+ AQ + + + + + MR + P+D
Sbjct: 478 LDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDD 537
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+F++ ++AC+ A G+ HC I+ G S V +SLI +Y K G+VE + +F
Sbjct: 538 VSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQ 597
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ IV N++IAG+ Q+ AI LF++++K +KP ++TF ++S C G
Sbjct: 598 VDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIG 657
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLG---RAGLLEEARDFIKQMPIYPNAVIWEA 409
K K G+ D V L G ++ +LE+A + +MP + N W A
Sbjct: 658 KQVHCYTLKSGVL--YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTA 711
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 3/278 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D SF STA+ +C + R G CLAI+ G +N VGSSLI LYSK + + K+F
Sbjct: 537 DVSF-STAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 595
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
++ ++V A+IA F Q D ++L++ + L+P+ TF+SILS C+GS
Sbjct: 596 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 655
Query: 254 QGRSAHCQTIRMG-FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAG 311
G+ HC T++ G + + SL +Y K +E+A + M K++ W ++I+G
Sbjct: 656 IGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 715
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
YAQ+G ++ F M V+ D TF V+ +C +GK + K G
Sbjct: 716 YAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSY 775
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S ++D+ + G + + + K++ + + W +
Sbjct: 776 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 813
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A + ++MP + V+W A+I+ AQ L LY+ MR+ L P TF S+LSA
Sbjct: 288 ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAAN 347
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A +G+ H + G + + V +SLI++Y KCG +A VF+ K+IV WN+M
Sbjct: 348 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAM 407
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ G+ Q+ L AI +F+ MM+ ++ D TF+ ++ +C + GK K+ +
Sbjct: 408 LTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 467
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L + +D+ + G + +A+ +P Y +++ W A
Sbjct: 468 DISLFVANATLDMYSKYGAIGDAKALFSLIP-YKDSISWNA 507
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 138/326 (42%), Gaps = 37/326 (11%)
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
R +RGG+P L R +G SL+ LY K + A+ R + ++++
Sbjct: 91 RILRGGSP---LLGR--------LGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 139
Query: 209 AAFAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
+ A+ L +R +R + P+ F +LSAC+ G L GR HC ++ GF
Sbjct: 140 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 199
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
S + +L+ MY KCG+V A VF+ + D + W+SMIA Y + G A+ LF
Sbjct: 200 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 259
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M K PD +T + +IS+ G ++ M P ++ V+ ++GL
Sbjct: 260 MDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMP----TPSTVAWNAVISGHAQSGL 315
Query: 388 LEEARDFIKQM---PIYPN-----AVIWEAAESRLLLEPE----CAATH---------VQ 426
K M ++P +++ AA + +E + A H
Sbjct: 316 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 375
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGL 452
L NLYA C A V L +K +
Sbjct: 376 LINLYAKCGCPSDAKNVFDLSCEKNI 401
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ +++C + G C +++GF ++V+ ++L+ +Y+KC + +A +VF+ +
Sbjct: 171 LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIA 230
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ + W+++IA + + L L+ M P+ T +I+S SG L
Sbjct: 231 CPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRL----- 285
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+ A + M V+WN++I+G+AQ GL
Sbjct: 286 ------------------------------DHATALLKKMPTPSTVAWNAVISGHAQSGL 315
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ L+++M + P TF ++S+ + EG+ + HGL + S
Sbjct: 316 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 375
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+++L + G +A++ + + N V+W A
Sbjct: 376 LINLYAKCGCPSDAKN-VFDLSCEKNIVMWNA 406
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R+ H + +R G ++ +SL+ +YCK G V A + + +S+++ +A+
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145
Query: 316 GLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
G + F + +PD V+S+C G++ G+ + K G +
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD+ + G + AR + P+ + W +
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIAC-PDTICWSS 239
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 241/423 (56%), Gaps = 19/423 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D EK + + + +E +S+ V +C + + A++T +NV+VG+
Sbjct: 101 DCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGT 160
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC ++ DA VFE MP R+ V+W++++A + Q + L L+ + LE
Sbjct: 161 ALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEH 220
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N FT +S LSAC AL +G+ + + G S I V +SLI MY KCG +EEA VF
Sbjct: 221 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 280
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+++ K++V WN++++G+++H ++ A+ FE+M + + P+ IT++ V+S+C H GLVE
Sbjct: 281 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 340
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
+G+ YFD M + H + P + HYSC+VD+LGRAGLL EA+DFI +MP A +W
Sbjct: 341 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLAS 400
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AA+ +EP A HV L+N+YA W++ AR R L+K+ K
Sbjct: 401 CRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKER 460
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
G SWIEI + V+ F ++++ R+ EI L+ LV +MK +GY + E + D R
Sbjct: 461 GKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKT-EHDLHDVEESRK 519
Query: 517 EPF 519
+
Sbjct: 520 QEL 522
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 131/265 (49%), Gaps = 3/265 (1%)
Query: 147 STRNIRGGAPYQCLA--IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
S RN C A IR G A+ + L+ +YSKC ++ A K+F+EMPVR++VSW
Sbjct: 30 SARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSW 89
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
++ + Q + L L+ M+ ++FT +S++ AC + + + H ++
Sbjct: 90 NTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALK 149
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
S + V +L+ +Y KCG V++A VF M + V+W+SM+AGY Q+ L A+ L
Sbjct: 150 TALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVL 209
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F ++ + T +S+C + EGK K G+ + S ++D+ +
Sbjct: 210 FHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAK 269
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G++EEA + N V+W A
Sbjct: 270 CGIIEEAYTVFSSVE-EKNVVLWNA 293
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 241/439 (54%), Gaps = 33/439 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLI---SMHHD------LHRE--RLKVDASFLSTA--VTSCGS 147
SS VF Q++ +I SM H L+RE R V + LS++ + SC
Sbjct: 121 SSQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIR 180
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
++ GG +R G ++ + ++L+ LYS C +A KVF+E+P + VSW +
Sbjct: 181 ISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVL 240
Query: 208 IAAFAQEWQVDMCLELYRMMRNSM--LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
I+ + L ++ +M+++ EP+D T +L AC GAL G H
Sbjct: 241 ISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEH 300
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G+ + + NSLI+MY +CG +E+A +F M +++VSW++MI+G+A HG AI+ F
Sbjct: 301 GYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAF 360
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
E+M + V PD T GV+S+C H GLV++G ++FD M+K G++P + HY C+VDLLGR
Sbjct: 361 EQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGR 420
Query: 385 AGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQL 427
AGLL++A I M I P++ +W E L+ L+ + A +V L
Sbjct: 421 AGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLL 480
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
N+Y+ V WD+ +RK MK+KG++T+PGCS IE+ V+ F +D + R EI +L
Sbjct: 481 LNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEML 540
Query: 488 DFLVDQMKTLGYVPEVHEE 506
D + Q+K GYV E+ E
Sbjct: 541 DEIGKQLKIAGYVAELSSE 559
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 200/350 (57%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+ +++IT Y + I A K F+ MP R+ VSW AIIA +AQ + L ++ ++
Sbjct: 327 NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIK 386
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N TF LS C AL G+ H Q ++MG+ + V N+L++MY KCG+++
Sbjct: 387 QDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSID 446
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA F + KD+VSWN+M+AGYA+HG +A+ +FE M VKPD IT +GV+S+C
Sbjct: 447 EANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACS 506
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GL++ G YF SM K +G+ P HY+C++DLLGRAG LEEA+D I+ MP P A W
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASW 566
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
+AAE +EP+ + +V L+NLYA W A ++R M+D
Sbjct: 567 GALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDI 626
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G++ PG SW+E+ N ++ F D S+ I L+ L +M+ GYV
Sbjct: 627 GVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYV 676
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 117/224 (52%), Gaps = 16/224 (7%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++T Y + + DA ++F+ MP ++VVSW ++++ +AQ VD E++ ++M E N
Sbjct: 117 MLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVF----DNMPEKN 172
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++ +L+A +G + + S+ N L+ + + + +A ++F+
Sbjct: 173 SISWNGLLAAYVHNGRIEEACLLFESKSDWDLISW----NCLMGGFVRKKKLGDARWLFD 228
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M +D +SWN+MI+GYAQ G +A LF+E + D T+ ++S G+++E
Sbjct: 229 KMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR----DVFTWTAMVSGYVQNGMLDE 284
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K +FD M + K E+ Y+ ++ + ++ AR+ + MP
Sbjct: 285 AKTFFDEMPE---KNEVS-YNAMIAGYVQTKKMDIARELFESMP 324
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 108/220 (49%), Gaps = 5/220 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++M ++ ++ ++ + A+++C + G A++ G+ +VG++L
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNAL 435
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC I +A FE + ++VVSW ++A +A+ L ++ M+ + ++P++
Sbjct: 436 LAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDE 495
Query: 237 FTFTSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T +LSAC+ +G L +G + T G + +I + + G +EEA +
Sbjct: 496 ITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIR 555
Query: 296 NMHGK-DIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQ 331
NM + SW +++ HG L +A ++ +M Q
Sbjct: 556 NMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ 595
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 43/240 (17%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF MP R+ VS+ A+I+ + + + ++ L+ + M E + F++ +L+
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF----DQMPERDLFSWNVMLTGYVR 123
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ LG R S+ NSL+S Y + G V+EA VF+NM K+ +SWN +
Sbjct: 124 NCRLGDARRLFDLMPEKDVVSW----NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGL 179
Query: 309 IAGYAQHGLAVRAIDLFEE-----------MMKQRVKP----------------DAITFL 341
+A Y +G A LFE +M V+ DAI++
Sbjct: 180 LAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG--RAGLLEEARDFIKQMP 399
+IS GG + + + FD P D ++ + G + G+L+EA+ F +MP
Sbjct: 240 TMISGYAQGGGLSQARRLFDE------SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+V+ +++++ Y + ++ +A F+EMP +N VS+ A+IA + Q ++D+ EL+ M
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESM- 323
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
C+ I N++I+ Y + G++
Sbjct: 324 ------------------------------PCRN--------ISSWNTMITGYGQIGDIA 345
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A F+ M +D VSW ++IAGYAQ G A+++F E+ + + TF +S+C
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+E GK K G + ++ + + G ++EA D
Sbjct: 406 DIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAND 450
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 13/137 (9%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N IS + + G+ + A++VFN M + VS+N+MI+GY ++ A +LF++M ++ +
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF 112
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA--GLLEEAR 392
+ G + +CR G + + FD M PE D S L G A G ++EAR
Sbjct: 113 SWNVMLTGYVRNCRLG----DARRLFDLM------PEKDVVSWNSLLSGYAQNGYVDEAR 162
Query: 393 DFIKQMPIYPNAVIWEA 409
+ MP N++ W
Sbjct: 163 EVFDNMP-EKNSISWNG 178
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 24/122 (19%)
Query: 351 GLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE- 408
GL++ G YF M ++ + P HY+C++DLLGR LEE + I+ N + E
Sbjct: 778 GLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEGA-LLGASRIHGNTELGEK 836
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AA+ + P Q + + K M+D G++ PG SW E+ N ++
Sbjct: 837 AAQMFFKMGP--------------------QNSGISK-MRDVGVQKVPGYSWFEVQNKIH 875
Query: 469 RF 470
F
Sbjct: 876 TF 877
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 241/423 (56%), Gaps = 19/423 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D EK + + + +E +S+ V +C + + A++T +NV+VG+
Sbjct: 128 DCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGT 187
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC ++ DA VFE MP R+ V+W++++A + Q + L L+ + LE
Sbjct: 188 ALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEH 247
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N FT +S LSAC AL +G+ + + G S I V +SLI MY KCG +EEA VF
Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 307
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+++ K++V WN++++G+++H ++ A+ FE+M + + P+ IT++ V+S+C H GLVE
Sbjct: 308 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 367
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
+G+ YFD M + H + P + HYSC+VD+LGRAGLL EA+DFI +MP A +W
Sbjct: 368 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLAS 427
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AA+ +EP A HV L+N+YA W++ AR R L+K+ K
Sbjct: 428 CRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKER 487
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
G SWIEI + V+ F ++++ R+ EI L+ LV +MK +GY + E + D R
Sbjct: 488 GKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKT-EHDLHDVEESRK 546
Query: 517 EPF 519
+
Sbjct: 547 QEL 549
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 131/265 (49%), Gaps = 3/265 (1%)
Query: 147 STRNIRGGAPYQCLA--IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
S RN C A IR G A+ + L+ +YSKC ++ A K+F+EMPVR++VSW
Sbjct: 57 SARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSW 116
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
++ + Q + L L+ M+ ++FT +S++ AC + + + H ++
Sbjct: 117 NTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALK 176
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
S + V +L+ +Y KCG V++A VF M + V+W+SM+AGY Q+ L A+ L
Sbjct: 177 TALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVL 236
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F ++ + T +S+C + EGK K G+ + S ++D+ +
Sbjct: 237 FHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAK 296
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G++EEA + N V+W A
Sbjct: 297 CGIIEEAYTVFSSVE-EKNVVLWNA 320
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 227/423 (53%), Gaps = 52/423 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L E ++ D+ L + +T+C T ++R G AI G ++ +VG +L+ +YSKC+
Sbjct: 425 LMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQD 484
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQE------------------------W------ 215
+ A F+E+ ++V +W A+I+ + + W
Sbjct: 485 LTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAG 544
Query: 216 -----QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
Q+D+ ++L+ M+ S L P+ +T IL AC+ L +G+ AH +I+ G+ +
Sbjct: 545 LVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTD 604
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ + +L+ MY KCG+++ A ++ + ++VS N+M+ A HG I LF+ M+
Sbjct: 605 VHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLA 664
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
PD +TFL V+SSC H G VE G +FD M + +KP L HY+ +VDLL R+G L E
Sbjct: 665 LGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHE 724
Query: 391 ARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAG 433
A + IK+MP+ ++V+W E A RL+ LEP + +V LANL+A
Sbjct: 725 AYELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAY 784
Query: 434 VRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQ 493
R W ARVR +MKD+G+ +PGCSWIE N ++ F A D+S+ R EI LD+L
Sbjct: 785 ARRWTDLARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLALH 844
Query: 494 MKT 496
MKT
Sbjct: 845 MKT 847
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 11/255 (4%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+TGF A+ ++ + L+ +Y++C ++ DA +FE MP+RN+ SW AI++ + +
Sbjct: 86 IKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAF 145
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
L+++++ +E + F F + AC+G G++ GR H I+ F I V+N+LI MY
Sbjct: 146 LLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMY 205
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITF 340
KCG++++A V M +D V+WNS+I A +G+ A++ E+M P+ +++
Sbjct: 206 GKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSW 265
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR-------- 392
VI G EE M GL P + V+ R L+ +
Sbjct: 266 SAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITR 325
Query: 393 -DFIKQMPIYPNAVI 406
DFI P+ NA++
Sbjct: 326 HDFISN-PVVVNALV 339
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 138/317 (43%), Gaps = 46/317 (14%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I M + E L +A L+ + +C + + G R FI+N V ++L
Sbjct: 279 EEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNAL 338
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNV----------------------------------- 201
+ +Y +C + A K+F + V+NV
Sbjct: 339 VDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGL 398
Query: 202 VSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
+SW +II+ + + + D +++ M+ +EP+ FT S+L+AC + +L QG+ H
Sbjct: 399 ISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHA 458
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
Q I G S V +L+ MY KC ++ A F+ + KD+ +WN++I+GY + R
Sbjct: 459 QAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIER 518
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV-----YFDSMAKHGLKPELDHY 375
L E+M P+ T+ +++ GLVE ++ F M L+P++
Sbjct: 519 IQYLLEKMKGDGYHPNIYTWNSILA-----GLVENRQLDLTMQLFSEMQISKLRPDIYTV 573
Query: 376 SCVVDLLGRAGLLEEAR 392
++ R LE +
Sbjct: 574 GIILPACSRLATLERGK 590
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 37/283 (13%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L + +++D +C ++ G L I+ F N+YV ++LI +Y KC
Sbjct: 151 LQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGS 210
Query: 186 IIDAYKVFEEMPVR------------------------------------NVVSWTAIIA 209
+ DA KV +MP R NVVSW+A+I
Sbjct: 211 LDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIG 270
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
FAQ + +E+ M+ L PN T +L AC L G+ H R F S
Sbjct: 271 GFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFIS 330
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
V N+L+ +Y +CG++ A +F K+++S N+MI GY + G +A +LF+ M
Sbjct: 331 NPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMD 390
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPE 371
++ I++ +IS + +E F +M + G++P+
Sbjct: 391 VLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPD 433
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 7/187 (3%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N + S+L +C G+ H TI+ GF + + L+ MY +CG +++A ++F
Sbjct: 61 NTSKYASVLDSCKCPKL---GKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLF 117
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +++ SW ++++ Y HGL A LF+ + V+ D F V +C G VE
Sbjct: 118 ETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVE 177
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAA 410
G+ + K + + ++D+ G+ G L++A+ + +MP + N+VI A
Sbjct: 178 LGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACA 237
Query: 411 ESRLLLE 417
+ ++ E
Sbjct: 238 ANGMVYE 244
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + ++ +L+ D + + +C + G +I+ G+ +V++G++L+ +
Sbjct: 555 MQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDM 614
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + A ++ + N+VS A++ A A + + L++ M P+ TF
Sbjct: 615 YAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTF 674
Query: 240 TSILSACTGSGALGQGRSAHCQTIR-MGFFSY---IQVANSLISMYCKCGNVEEAVYVFN 295
S+LS+C G++ G C+ MG+++ ++ S++ + + G + EA +
Sbjct: 675 LSVLSSCVHVGSVETG----CEFFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIK 730
Query: 296 NMHGK-DIVSWNSMIAGYAQHG 316
M + D V W +++ G HG
Sbjct: 731 KMPVECDSVLWGALLGGCVTHG 752
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/354 (38%), Positives = 204/354 (57%), Gaps = 27/354 (7%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVR--------NVVSWTAIIAAFAQEWQVDMCLELYR 225
++LIT +++ + +A ++F ++ NVVSW+AII FA + + LEL+R
Sbjct: 248 NALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFR 307
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+++ + N T +++LS C AL GR H +R + I V N L++MY KCG
Sbjct: 308 RMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCG 367
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++E +F KD++SWNSMI GY HGL + A++ F++M+K KPD +TF+ V+S
Sbjct: 368 CLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLS 427
Query: 346 SCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
SC H GLV EG+ FD M K+ ++P+++HY+C+VDLLGRAGLL EA + +K MP+ PNA
Sbjct: 428 SCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNA 487
Query: 405 VIW----------------EAAESRL--LLEPECAATHVQLANLYAGVRCWDQAARVRKL 446
+W E S L L E T++ L+N+YA W+ +ARVR
Sbjct: 488 CVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTS 547
Query: 447 MKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
K KGLK NPG SWI++ VY F A + +I +L+ L QM+ G V
Sbjct: 548 AKTKGLKKNPGQSWIKVEKNVYTFSAGNNMQRGFEQIFEILEELTFQMEREGTV 601
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 39/271 (14%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR---------------------- 199
+ GF ++++VG+ LI +Y+K + DA +F+ M VR
Sbjct: 69 LEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGAL 128
Query: 200 -------------NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC 246
N+V+WT++I+++A+ + +EL+ +MR +E + ++S C
Sbjct: 129 EIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISIC 188
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
GA + + H ++ GF Y V ++LI +Y K G+V A +F M K + SWN
Sbjct: 189 ADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWN 248
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQ----RVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
++I +A+ GL A+++F ++ + R++P+ +++ +I G +E F
Sbjct: 249 ALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRR 308
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
M + S V+ L L R+
Sbjct: 309 MQHAKILANAVTISTVLSLCAELAALHLGRE 339
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 87/168 (51%)
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
R MR + FTF ++ AC G+ G++ H + MGF S++ V N LI MY K
Sbjct: 31 RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G + +A ++F+ M + +SWN+M++ YA + A+++F+ M + ++P+ +T+ +I
Sbjct: 91 GRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLI 150
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
SS G EE F M G++ + + V+ + G A+
Sbjct: 151 SSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAK 198
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 70/139 (50%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ ++ +A +ST ++ C + G +R + N+ VG+ L+ +Y+KC
Sbjct: 309 MQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGC 368
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ + + +FE+ ++++SW ++I + LE + M +P+ TF ++LS+
Sbjct: 369 LKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSS 428
Query: 246 CTGSGALGQGRSAHCQTIR 264
C+ SG + +GR Q ++
Sbjct: 429 CSHSGLVHEGRRLFDQMLK 447
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 234/421 (55%), Gaps = 22/421 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ +++ H++ + D L A+ S R + A + L +R G A+++V ++L
Sbjct: 23 QRALALLHEMRARGHRADEYTLPPALNSAALLR-LPADALHSLL-LRAGLAAHLHVANAL 80
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ Y+K A VF+EMP R+VVSWT+++ A+ D L++YR M + + P++
Sbjct: 81 VDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARSRSHDSALQVYRDMVAAGVGPDE 140
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F + LS+C G+ AL GRS H +R+ ++ V NSL+SMY K G++ EA VF+
Sbjct: 141 FAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVGNSLVSMYAKTGSLGEAKKVFDA 200
Query: 297 MHGK--DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
D ++W ++I GYAQ+G +++++ +M++ +PD +TF+G++ +C H GLV+
Sbjct: 201 TRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYVTFIGLLFACSHAGLVD 260
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
G+ +F SM A+HG+ P DHY+C+VDLLGRAG L+EA D + + +A +W+
Sbjct: 261 AGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEAMDLLNRSTTRLDATVWKALLAA 320
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AA L+P A +V L+NLY+ W ARVR MK +G+ P
Sbjct: 321 CRTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNLYSRAGRWGDVARVRTSMKARGITKEP 380
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
GCSW+ V + F ED+ + R +E+ ++ + ++++ GYV + D+ R
Sbjct: 381 GCSWVAANGVTHLFYVEDRRHPRAAEVYRKVEEMTERIRGQGYVADTAWALQDEGPEGRE 440
Query: 517 E 517
+
Sbjct: 441 K 441
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 226/404 (55%), Gaps = 21/404 (5%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M+ + E V ++ AV + S ++ G ++ GF +N+ V +S++
Sbjct: 198 LKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILDF 257
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y +C + +A + F EM +++++W +I+ + + L +++ + PN +TF
Sbjct: 258 YCRCGYLSEAKRYFHEMEDKDLITWNTLISELERSDSSEALL-MFQRFESQGFVPNCYTF 316
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
TS+++AC AL G+ H + R GF +++AN+LI MY KCG++ ++ VF +
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEE 376
Query: 300 K-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ ++VSW SM+ GY HG A++LF++M+ ++PD I F+ V+S+CRH GLVE+G
Sbjct: 377 RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK 436
Query: 359 YFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE--------- 408
YF+ M +++G+ P+ D Y+CVVDLLGRAG + EA + +++MP P+ W
Sbjct: 437 YFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Query: 409 ---------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
AA+ + L+P T+V L+ +YA W + ARVRK+M+ G K G S
Sbjct: 497 KHTGLISRLAAKKVMELKPRMVGTYVMLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMS 556
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
WIE+ N V+ F DK S + VL L+++ K GYVP++
Sbjct: 557 WIEVENQVFSFAVSDKMCPNASSVYSVLGLLIEETKEAGYVPDL 600
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 158/322 (49%), Gaps = 21/322 (6%)
Query: 103 NVFDQLLDTPVVDVEKLISMH-------------HDLHRERLKVDASFLSTAVTSCGSTR 149
++FD++ + VV +I+ + H++ ++ + LS+ + SC + +
Sbjct: 66 SLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGRSPNEFTLSSVLKSCRNMK 125
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID-AYKVFEEMPVRNVVSWTAII 208
+ GA + ++ G ++YV ++L+ +Y+ C V ++ A+ +F ++ V+N V+WT +I
Sbjct: 126 VLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDIKVKNDVTWTTLI 185
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ---GRSAHCQTIRM 265
F L++Y+ M +LE D T I A S ++ G+ H ++
Sbjct: 186 TGFTHLGDGIGGLKMYKQM---LLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKR 242
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
GF S + V NS++ YC+CG + EA F+ M KD+++WN++I+ + + A+ +F
Sbjct: 243 GFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISEL-ERSDSSEALLMF 301
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
+ Q P+ TF ++++C + + G+ + + G ++ + ++D+ +
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKC 361
Query: 386 GLLEEARDFIKQMPIYPNAVIW 407
G + ++ ++ N V W
Sbjct: 362 GDIPDSERVFGEIEERRNLVSW 383
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 5/230 (2%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
+ ++LI Y + ++ +A +F+EMP R+VV+WTA+I +A E + M
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQG 106
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG-NVEEA 290
PN+FT +S+L +C L G H +++G + V N+L++MY C +E A
Sbjct: 107 RSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAA 166
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR--VKPDAITFLGVISSCR 348
+F ++ K+ V+W ++I G+ G + + ++++M+ + V P IT + +
Sbjct: 167 FLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITI--AVRASA 224
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
V GK S+ K G + L + ++D R G L EA+ + +M
Sbjct: 225 SIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEM 274
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%)
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
+A +LI Y + G VEEA +F+ M +D+V+W +MI GYA A + F EM KQ
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQG 106
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
P+ T V+ SCR+ ++ G + + K G++ L + ++++ + EA
Sbjct: 107 RSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAA 166
Query: 393 DFIKQMPIYPNAVIW 407
I + N V W
Sbjct: 167 FLIFRDIKVKNDVTW 181
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 224/409 (54%), Gaps = 21/409 (5%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV-YVG 173
D+ + I + ++ E L ++ + +C + G CL + G + + ++G
Sbjct: 631 DLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLG 690
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
SL+ +Y + DA +F E ++ + WTAII+ Q + L+LY+ M +
Sbjct: 691 VSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNA 750
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
P+ TF S+L AC+ +LG GR H +G S ++++ MY KCG+++ +V
Sbjct: 751 RPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQ 810
Query: 293 VFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF M K D++SWNSMI G+A++G A A+ +F+EM R++PD +TFLGV+++C H G
Sbjct: 811 VFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAG 870
Query: 352 LVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--- 407
V EG+ FD M + + P LDH +C++DLLGR G L+EA +FI ++ PNA+IW
Sbjct: 871 RVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATL 930
Query: 408 --------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
AAE + LEPE ++ +V L+N+YA WD+ VR+ M++KGL+
Sbjct: 931 LGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLR 990
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PGCSWI + F A DK + EI +L L+ MK GY+ E
Sbjct: 991 KLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKEDGYIAE 1039
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 169/330 (51%), Gaps = 17/330 (5%)
Query: 103 NVFDQLLDTPVVDVEKLISMH-------------HDLHRERLKVDASFLSTAVTSCGSTR 149
++F Q+ +T VV +IS H ++ + +K S L + +++ S
Sbjct: 304 DLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLE 363
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+ G AI+ G +NVYVGSSLI +Y+KC + A KVF+ + RN+V W A++
Sbjct: 364 ALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLG 423
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+AQ ++L+ MR P++FT+TSILSAC L GR H I+ F
Sbjct: 424 GYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEY 483
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ V N+L+ MY KCG +EEA F + +D VSWN++I GY Q A ++F M+
Sbjct: 484 NLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMI 543
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
+ PD ++ ++S C + +E+G+ + K GL+ L S ++D+ + G +E
Sbjct: 544 LDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIE 603
Query: 390 EARDFIKQMP----IYPNAVIWEAAESRLL 415
AR MP + NA+I A++ L+
Sbjct: 604 AARYVFSCMPSRSVVSMNAIIAGYAQNDLV 633
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 132/239 (55%), Gaps = 8/239 (3%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ GF + +GS+++ LY+KC + A K F ++ R++++W ++++ ++++ ++ +
Sbjct: 108 LKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVI 167
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+ ++N + PN FT+ +LS+C + G+ HC I+MGF SLI MY
Sbjct: 168 WCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMY 227
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++ +A +F+ + D VSW +MIAGY Q GL A+ +FE+M K + PD + F+
Sbjct: 228 SKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFV 287
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG--RAGLLEEARDFIKQM 398
VI++C G +++ F M P + + V + G + G EA DF K M
Sbjct: 288 TVITACVGLGRLDDACDLFVQM------PNTNVVAWNVMISGHVKRGCDIEAIDFFKNM 340
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 157/326 (48%), Gaps = 22/326 (6%)
Query: 151 IRGGAPYQCLAI-----RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
++ G P + L + + G + + ++IT + DA +F +MP NVV+W
Sbjct: 259 VQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWN 318
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
+I+ + ++ ++ M + ++ T S+LSA AL G H Q I+
Sbjct: 319 VMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQ 378
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G S + V +SLI+MY KC +E A VF+ + +++V WN+M+ GYAQ+G A + + LF
Sbjct: 379 GLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLF 438
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
EM PD T+ ++S+C +E G+ + KH + L + +VD+ +
Sbjct: 439 SEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKC 498
Query: 386 GLLEEAR---DFIKQMP-IYPNAVIWEAAES----------RLLLEPECAATHVQLANLY 431
G LEEAR +FI+ + NA+I + R ++ A V LA++
Sbjct: 499 GALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASIL 558
Query: 432 AG---VRCWDQAARVRKLMKDKGLKT 454
+G ++ +Q +V + GL+T
Sbjct: 559 SGCANLQALEQGEQVHCFLVKSGLQT 584
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ ++SC +I G C I+ GF N + SLI +YSKC ++DA K+F+ +
Sbjct: 186 AIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVD 245
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+ VSWTA+IA + Q + L+++ M+ L P+ F ++++AC G G L
Sbjct: 246 PDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRL------ 299
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
++A +F M ++V+WN MI+G+ + G
Sbjct: 300 -----------------------------DDACDLFVQMPNTNVVAWNVMISGHVKRGCD 330
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+ AID F+ M K VK T V+S+ + G + K GL + S +
Sbjct: 331 IEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSL 390
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+++ + +E A+ + N V+W A
Sbjct: 391 INMYAKCEKMEAAKKVFDALD-ERNLVLWNA 420
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
++ H QT++ GF S ++ ++++ +Y KCGNVE A FN + +DI++WNS+++ Y++
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G + I F + V P+ T+ V+SSC ++ GK + K G +
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ + G L +AR + + P+ V W A
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAV-VDPDTVSWTA 253
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 225/412 (54%), Gaps = 23/412 (5%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + H++ +E + D ++T + +C T + G ++++V ++L+ +
Sbjct: 337 VRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDM 396
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFT 238
Y+KC + DA+ VF EM V+++VSW +I +++ + L L+ M NS +PN T
Sbjct: 397 YAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS--KPNSIT 454
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
IL AC AL +G+ H +R GF VAN+L+ MY KCG + A +F+ +
Sbjct: 455 MACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP 514
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
KD+VSW MIAGY HG AI F EM ++PD ++F+ ++ +C H GL++EG
Sbjct: 515 EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWG 574
Query: 359 YFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-------- 409
+F+ M + ++P+ +HY+C+VDLL RAG L +A FIK MPI P+A IW A
Sbjct: 575 FFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIY 634
Query: 410 ---------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
AE LEPE +V LAN+YA W++ ++R+ + +GL+ NPGCSW
Sbjct: 635 HDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSW 694
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE--KVDD 510
IEI V+ F D S+ ++I +L +MK G+ P++ K DD
Sbjct: 695 IEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADD 746
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)
Query: 104 VFDQLLDTPVVDVEKLISMH---------HDLHRERL----KVDASFLSTAVTSCGSTRN 150
+FD+L D V+ +IS + DL + L D + + + V C +T
Sbjct: 207 LFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGM 266
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G AI+ F + + + L+ +YSK + A +VFE M R+VVSWT++IA
Sbjct: 267 LLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAG 326
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+A+E DM + L+ M + P+ FT T+IL AC +G L G+ H S
Sbjct: 327 YAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSD 386
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ V+N+L+ MY KCG++ +A VF+ M KDIVSWN+MI GY+++ L A++LF E M+
Sbjct: 387 LFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVE-MQ 445
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
KP++IT ++ +C +E G+ + ++G + + +VD+ + G L
Sbjct: 446 YNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGL 505
Query: 391 ARDFIKQMP 399
AR +P
Sbjct: 506 ARLLFDMIP 514
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 120/217 (55%)
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
R + A K+F+E+ R+V+SW ++I+ + + L+L+ M + + T S++
Sbjct: 199 RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVV 258
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
+ C+ +G L GR+ H I+ F + + N L+ MY K GN+ A+ VF M + +V
Sbjct: 259 AGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVV 318
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SW SMIAGYA+ GL+ ++ LF EM K+ + PD T ++ +C GL+E GK + +
Sbjct: 319 SWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYI 378
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
++ ++ +L + ++D+ + G + +A +M +
Sbjct: 379 KENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQV 415
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 83/210 (39%), Gaps = 49/210 (23%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN----------- 286
T+ S+L C ++ GR H + + L+ MY CG+
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 287 --------------------------------------VEEAVYVFNNMHGKDIVSWNSM 308
VE A +F+ + +D++SWNSM
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I+GY +GL+ + +DLFE+M+ + D T + V++ C + G++ G+ K
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
EL +C++D+ ++G L A + M
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETM 312
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 252/492 (51%), Gaps = 72/492 (14%)
Query: 97 STFGS----SNVFDQLLDTPVVDVEKLISMH-------HDLHRERLKVD--ASFLSTAVT 143
S+FGS +FDQ+ V +I H H+ R L + + FL T
Sbjct: 60 SSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYT 119
Query: 144 ------SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE--- 194
+CG+ + G + AI+ G +N++V +++I +Y+ ++ +A +VF+
Sbjct: 120 FVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSL 179
Query: 195 ----------------------------EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
EM R+VVSWT IIA + Q L+L+
Sbjct: 180 DQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHE 239
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M + PN+FT S L+AC AL QGR H + ++ SL+ MY KCG
Sbjct: 240 MLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGE 299
Query: 287 VEEAVYVFNNMHGKD--IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
++ A VF++ +G + WN+MI GYA HG + AIDLFE+M ++V P+ +TF+ ++
Sbjct: 300 IDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALL 359
Query: 345 SSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
++C HG LVEEG+ YF SMA +G++PE++HY C+VDLLGR+GLL+EA + + MP+ P+
Sbjct: 360 NACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPD 419
Query: 404 AVIWEA--AESRLL---------------LEPECAATHVQLANLYAGVRCWDQAARVRKL 446
A IW A R+ L+ + HV LANLY+ WD+A VR+
Sbjct: 420 ATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQK 479
Query: 447 MKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
++ G K PGCS IE+ V ++F D+S+ + ++ LD + ++K GYVPE E
Sbjct: 480 IEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEV 539
Query: 507 --KVDDASHKRT 516
+DD K T
Sbjct: 540 LLDIDDEEDKET 551
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 13/235 (5%)
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL--ITLYSKCRVIIDAYKVFEEMPV 198
++ SC S I+ + I TG I + + L + + S + A+++F+++P
Sbjct: 21 SLESCKSMNQIKQTHAH---LITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPK 77
Query: 199 RNVVSWTAIIAAFA---QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+V + +I A A M + L M+R S PN +TF + AC + +G
Sbjct: 78 PDVFIYNTMIKAHAVIPTSSHNSMRIFL-SMVRVSGFLPNRYTFVFVFKACGNGLGVLEG 136
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
I++G S + V N++I MY G V+EA VF+ +D+ SWN MI GY
Sbjct: 137 EQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGS 196
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G RA ++F+EM ++ D +++ +I+ G +E F M + G P
Sbjct: 197 GEIGRAKEMFDEMSER----DVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPP 247
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC--GNVEEAVYVFNNMHGKDIVSWNSM 308
++ Q + H I G + AN L+ + G++ A +F+ + D+ +N+M
Sbjct: 27 SMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTM 86
Query: 309 IAGYAQHGLAVR-AIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
I +A + ++ +F M++ P+ TF+ V +C +G V EG+ K
Sbjct: 87 IKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKI 146
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEAR 392
GL+ L + ++ + GL++EAR
Sbjct: 147 GLESNLFVTNAMIRMYANWGLVDEAR 172
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 222/428 (51%), Gaps = 59/428 (13%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+++ A L+ ++ C + G ++ G+ ++V ++LI Y K + + DA+
Sbjct: 264 IEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAH 323
Query: 191 KVFEEMPVRN-----------------------------------------VVSWTAIIA 209
KVF E+ +N V+SW+A+I+
Sbjct: 324 KVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVIS 383
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
FA + + + LEL+R M+ + + N T +S+LS C AL GR H IR
Sbjct: 384 GFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSD 443
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
I V N LI+MY KCG+ +E VF+N+ G+D++SWNS+I GY HGL A+ F EM+
Sbjct: 444 NILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMI 503
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLL 388
+ R+KPD ITF+ ++S+C H GLV G+ FD M + ++P ++HY+C+VDLLGRAGLL
Sbjct: 504 RARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLL 563
Query: 389 EEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLY 431
+EA D ++ MPI PN +W E A L L+ + + + L+N+Y
Sbjct: 564 KEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIY 623
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A WD +ARVR + KGLK PG SWIE+ VY F A + + L +I +L+ L
Sbjct: 624 AANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFGLEDIYVILEELN 683
Query: 492 DQMKTLGY 499
M + Y
Sbjct: 684 LHMASENY 691
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 113/202 (55%), Gaps = 3/202 (1%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVR---NVVSWTAIIAAFAQEWQVDMCLELYRMM 227
++ + LI +Y++ + A KVF+ +P+ +++ W +II A LELY M
Sbjct: 64 FLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEM 123
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
R P+ FT ++ AC+ G+ R HC ++MGF +++ V N L+ MY K G +
Sbjct: 124 RKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRM 183
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
E+A +F+ M + IVSWN+M++GYA + ++ A +F+ M + ++P+++T+ ++SS
Sbjct: 184 EDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSH 243
Query: 348 RHGGLVEEGKVYFDSMAKHGLK 369
GL +E F M G++
Sbjct: 244 ARCGLYDETLELFKVMRTRGIE 265
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 51/276 (18%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPY-----QCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
D L + +C S G+ Y C A++ GF +++V + L+ +Y K + D
Sbjct: 131 DGFTLPLVIRACSSL-----GSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMED 185
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQE------------------------WQ-------- 216
A ++F+ M VR++VSW +++ +A W
Sbjct: 186 ARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHAR 245
Query: 217 ---VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
D LEL+++MR +E +LS C + G+ H ++ G+ Y+ V
Sbjct: 246 CGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFV 305
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR- 332
N+LI Y K ++ +A VF + K++VSWN++I+ YA+ GL A F M K
Sbjct: 306 KNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDS 365
Query: 333 -----VKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
V+P+ I++ VIS + G E+ F M
Sbjct: 366 DDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQM 401
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + + + ++ + +S+ ++ C + G AIR N+ VG+ L
Sbjct: 392 EKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGL 451
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y KC + + VF+ + R+++SW ++I + + L + M + ++P++
Sbjct: 452 INMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDN 511
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF +ILSAC+ +G + GR+ Q + ++ ++ + + G ++EA +
Sbjct: 512 ITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVR 571
Query: 296 NM 297
NM
Sbjct: 572 NM 573
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 240/423 (56%), Gaps = 19/423 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D EK + + + +E + +S+ V +C + + A++T +NV+VG+
Sbjct: 128 DSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGT 187
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC ++ DA VFE MP R+ V+W++++A + Q + L L+ + LE
Sbjct: 188 ALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEH 247
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N FT +S LSAC AL +G+ + G S I V +SLI MY KCG +EEA VF
Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVF 307
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+++ K++V WN+M++G+++H ++ A+ FE+M + + P+ IT++ V+++C H GLVE
Sbjct: 308 SSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVE 367
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
+G+ YFD M + H + P + HYSC+VD+LGRAGLL EA+D I +MP A +W
Sbjct: 368 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLLAS 427
Query: 408 ----------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
E A L +EP A HV L+N+YA W++ AR R L+K+ K
Sbjct: 428 CRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKESKAKKER 487
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
G SWIEI + V+ F ++++ R+ EI L+ LV +MK +GY + E + D R
Sbjct: 488 GKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKT-EHDLHDVEESRK 546
Query: 517 EPF 519
+
Sbjct: 547 QEL 549
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 133/265 (50%), Gaps = 3/265 (1%)
Query: 147 STRNIRGGAPYQCLA--IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
S RN C A IR G A+ + L+ +YSKC ++ A K+F+EMPVR++VSW
Sbjct: 57 SARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSW 116
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
++ + Q + L L+ M+ + ++FT +S++ AC + + + H ++
Sbjct: 117 NTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALK 176
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
S + V +L+ +Y KCG V++A VF M + V+W+SM+AGY Q+ L A+ L
Sbjct: 177 TALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVL 236
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F ++ + T +S+C + EGK + K G+ + S ++D+ +
Sbjct: 237 FHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAK 296
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G++EEA + N V+W A
Sbjct: 297 CGIIEEAYIVFSSVE-EKNVVLWNA 320
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 224/392 (57%), Gaps = 19/392 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+ L+ D + + V +C N+ G + G N+ V ++++ +Y KC I
Sbjct: 5 DNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIES 64
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF + ++V+SWT++++ A+ L L+R M+ +EP++ T +LSAC
Sbjct: 65 AQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQ 124
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+GAL QG+ H + + + +L+ MY KCG+++ A+ VF M +++ +WN+M
Sbjct: 125 TGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAM 184
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHG 367
I G A HG AI LF++M ++ PD +TF+ ++ +C H GLV+EG F +M K
Sbjct: 185 IGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQ 244
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAE 411
++P ++HY CVVDLL RA +++A FI+ MPI N+V+W E
Sbjct: 245 IEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIX 304
Query: 412 SRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
R++ LEP+ +V L+NLYAGV WD A ++RK MK+KG++ PGCSWIE+ ++++F
Sbjct: 305 RRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQF 364
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMK-TLGYVP 501
A D+S+ + +I +++ + ++ G+VP
Sbjct: 365 VAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVP 396
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M + L P++ T S++ AC G L +G+ H + +G + V N+++ MYCKC
Sbjct: 1 MTKLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCD 60
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
++E A VFN + KD++SW SM++G A+ G ++ LF +M +++PD IT +GV+S
Sbjct: 61 DIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLS 120
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
+C G +++GK + K + +L + +VD+ + G ++ A ++M + N
Sbjct: 121 ACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVF 179
Query: 406 IWEA 409
W A
Sbjct: 180 TWNA 183
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 107/223 (47%), Gaps = 10/223 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ + +++ D L +++C T + G L + ++ + ++L+ +
Sbjct: 97 LALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDM 156
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I A +VF M VRNV +W A+I A + + L+ M L P+D TF
Sbjct: 157 YAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTF 216
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGF--FSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
++L AC+ +G + +G A Q ++ F ++ ++ + C+ V++A+ NM
Sbjct: 217 IALLCACSHAGLVDEGL-AMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENM 275
Query: 298 HGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ--RVKPDA 337
K + V W +++ G DL E++ ++ ++PD+
Sbjct: 276 PIKANSVLWATLLGACRSGG----HFDLAEKIXRRVIELEPDS 314
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 233/439 (53%), Gaps = 53/439 (12%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+K +++ ++ +K D + + + +C ++++ G A+R G + +V+V ++L
Sbjct: 426 QKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNAL 485
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF----------------------AQE 214
++LY+KC + +A VF+ +P R V SW I+ A+ A E
Sbjct: 486 LSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADE 545
Query: 215 --WQV-----------DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
W V + +E++R M+ +P++ T SIL AC+ S L G+ HC
Sbjct: 546 ITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCY 605
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
R + N+L+ MY KCG + + VF+ M KD+ SWN+MI HG A
Sbjct: 606 VFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEA 665
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVD 380
+ LFE+M+ VKPD+ TF V+S+C H LVEEG F+SM++ H ++PE +HY+CVVD
Sbjct: 666 LSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVD 725
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAAT 423
+ RAG LEEA FI++MP+ P A+ W+A A+ ++P +A
Sbjct: 726 IYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSAN 785
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
+V L N+ + W +A+++RKLMK++G+ PGCSW + N V+ F A DKSN +I
Sbjct: 786 YVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKI 845
Query: 484 LPVLDFLVDQMKTLGYVPE 502
LD L ++K GY P+
Sbjct: 846 YNFLDELFAKIKAAGYKPD 864
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 162/338 (47%), Gaps = 14/338 (4%)
Query: 88 FNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKL-------------ISMHHDLHRERLKVD 134
F H + G+ VFD L+ VV L +++ + ++K +
Sbjct: 81 FIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKAN 140
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
+S+ + C ++++ G +R G + +V+V S+ + Y+KC + +A VF+
Sbjct: 141 PLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFD 200
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
MP R+VV+W ++ + + L ++R M ++P+ T + ILSAC+ L
Sbjct: 201 LMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKS 260
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G++ H ++ G + V+N+L+++Y C V EA VF+ M +++++WNS+ + Y
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVN 320
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
G + +++F EM VKPD + ++ +C ++ GK KHG+ ++
Sbjct: 321 CGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFV 380
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+ +V+L + EA+ MP + N V W + S
Sbjct: 381 CTALVNLYANCLCVREAQTVFDLMP-HRNVVTWNSLSS 417
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 150/283 (53%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+K +++ ++ + +K D +S +++C ++++ G A++ G + NV+V ++L
Sbjct: 224 QKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNAL 283
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LY C + +A VF+ MP RNV++W ++ + + L ++R M + ++P+
Sbjct: 284 VNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDP 343
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+SIL AC+ L G++ H ++ G + V +L+++Y C V EA VF+
Sbjct: 344 MAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDL 403
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +++V+WNS+ + Y G + +++F EM+ VKPD +T L ++ +C ++ G
Sbjct: 404 MPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG 463
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
KV +HG+ ++ + ++ L + + EA+ +P
Sbjct: 464 KVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 133/255 (52%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+K +++ ++ +K D +S+ + +C ++++ G A++ G + +V+V ++L
Sbjct: 325 QKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTAL 384
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ LY+ C + +A VF+ MP RNVV+W ++ + + L ++R M + ++P+
Sbjct: 385 VNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDL 444
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T SIL AC+ L G+ H +R G + V N+L+S+Y KC V EA VF+
Sbjct: 445 VTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDL 504
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ +++ SWN ++ Y + + + +F +M + VK D IT+ VI C +EE
Sbjct: 505 IPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEA 564
Query: 357 KVYFDSMAKHGLKPE 371
F M G KP+
Sbjct: 565 MEIFRKMQTMGFKPD 579
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 141/282 (50%), Gaps = 1/282 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+K D +C ++R+ + A R G +++V +G++ I Y KC+ + A
Sbjct: 36 IKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGAR 95
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF+++ R+VV+W ++ A + L ++R M + ++ N T +SIL C+
Sbjct: 96 RVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQ 155
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L G+ H +R G + V+++ ++ Y KC V EA VF+ M +D+V+WNS+ +
Sbjct: 156 DLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSS 215
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
Y G + +++F EM+ VKPD +T ++S+C ++ GK KHG+
Sbjct: 216 CYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVE 275
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+ + +V+L + EA+ MP + N + W + S
Sbjct: 276 NVFVSNALVNLYESCLCVREAQAVFDLMP-HRNVITWNSLAS 316
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+++Y R ++P+ F ++ AC S + + H R G S + + N+ I
Sbjct: 25 IKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHA 84
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KC VE A VF+++ +D+V+WNS+ A Y G + +++F +M +VK + +T
Sbjct: 85 YGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTV 144
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
++ C ++ GK + +HG+ ++ S V+ + + EA+ MP
Sbjct: 145 SSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMP- 203
Query: 401 YPNAVIWEAAES 412
+ + V W + S
Sbjct: 204 HRDVVTWNSLSS 215
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 221/400 (55%), Gaps = 28/400 (7%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C ++ G L +R+GF +V V + LI Y KC+ I + +F EM +N
Sbjct: 216 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 275
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSW +++AA+ Q + + LY R ++E +DF +S+LSAC G L GRS H
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ I V ++L+ MY KCG +E++ F+ M K++V+ NS+I GYA G A
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395
Query: 322 IDLFEEMMKQRV--KPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCV 378
+ LFEEM + P+ +TF+ ++S+C G VE G FDSM + +G++P +HYSC+
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 455
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECA 421
VD+LGRAG++E A +FIK+MPI P +W AAE+ L+P+ +
Sbjct: 456 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS 515
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
HV L+N +A W +A VR+ +K G+K G SWI + N V+ F+A+D+S+
Sbjct: 516 GNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNK 575
Query: 482 EILPVLDFLVDQMKTLGYVPEV--------HEEKVDDASH 513
EI L L ++M+ GY P++ EEK + SH
Sbjct: 576 EIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSH 615
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ RE + + A + S R G LA++ G I +V+VG S +Y K R
Sbjct: 98 EMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR 157
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA K+F+E+P RN+ +W A I+ + + +E + R PN TF + L+
Sbjct: 158 LRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLN 217
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC+ L G H +R GF + + V N LI Y KC + + +F M K+ VS
Sbjct: 218 ACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS 277
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W S++A Y Q+ +A L+ K V+ V+S+C +E G+
Sbjct: 278 WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 337
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K ++ + S +VD+ G+ G +E++ +MP
Sbjct: 338 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 1/237 (0%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
++ + LI +YSK A V P RNVVSWT++I+ AQ L + MR
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ PNDFTF A G+ H ++ G + V S MYCK ++A
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F+ + +++ +WN+ I+ G AI+ F E + P++ITF +++C
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ G + + G ++ + ++D G+ + + +M NAV W
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT-KNAVSW 278
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S+ +++C + G A++ ++VGS+L+ +Y KC I D+ + F+EMP
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSMLEPNDFTFTSILSACTGSGALGQG 255
+N+V+ ++I +A + QVDM L L+ M R PN TF S+LSAC+ +GA+ G
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Query: 256 -------RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNS 307
RS + I G Y + ++ M + G VE A M + +S W +
Sbjct: 433 MKIFDSMRSTY--GIEPGAEHY----SCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 308 MIAGYAQHG 316
+ HG
Sbjct: 487 LQNACRMHG 495
>gi|224135801|ref|XP_002327307.1| predicted protein [Populus trichocarpa]
gi|222835677|gb|EEE74112.1| predicted protein [Populus trichocarpa]
Length = 527
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 215/373 (57%), Gaps = 33/373 (8%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSK-CRVIIDAY-----KVFEEMPVRNVVSWTAI 207
G LA++ G IA+VYVG++LIT YSK C Y +VFE M RN+VSW ++
Sbjct: 72 GKQVHALALKMGLIASVYVGNALITRYSKSCEDNFVGYGSEACRVFESMEFRNLVSWNSM 131
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
IAA + L L+R + L P+ TF+ +L AC G + + Q ++ GF
Sbjct: 132 IAAEEE------ALLLFRQLYREGLAPDWCTFSIVLKACAGFVTERHALAVYSQVVKAGF 185
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+AN+LI Y +CG++ + VF+ M +D+VSWNSMI YA HG A A+ LF E
Sbjct: 186 EDDRVLANTLIHAYARCGSISFSKQVFDKMRSRDVVSWNSMIKAYALHGQAKEALHLFSE 245
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAG 386
M V+PD+ T + ++S+C H GLVEEG FDSM+ HG+ P+LDHY+C+VD+LGRAG
Sbjct: 246 M---NVRPDSATMVALLSACSHAGLVEEGINIFDSMSMNHGVSPQLDHYACMVDILGRAG 302
Query: 387 LLEEARDFIKQMPIYPNAVIWEA--------AESRLL---------LEPECAATHVQLAN 429
LL EA + I +MP+ P++V+W A E++L LEP + +VQ++N
Sbjct: 303 LLLEAGELISRMPMKPDSVVWSALLSSCRKYGETQLAKLAADKLKELEPGNSLGYVQISN 362
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+Y +++A +R M ++ PG SWIEI N V+ F + + + + I L
Sbjct: 363 IYCSGGSYNEAGLIRDEMNGSRVRKEPGLSWIEIENRVHEFASGGRRHPQREAIYAKLYS 422
Query: 490 LVDQMKTLGYVPE 502
L+ Q+K +GYVPE
Sbjct: 423 LIGQLKGVGYVPE 435
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 19/183 (10%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y+KC + A +VF+EM RNVVSWTA+I+ +AQ + C L+ M PN+F
Sbjct: 1 MYAKCGDLDRARQVFDEMGRRNVVSWTALISGYAQHGRSYECFSLFSDMLVDCY-PNEFA 59
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK------CGNVEEAVY 292
F S++ +C G+ H ++MG + + V N+LI+ Y K G EA
Sbjct: 60 FASVIISCD----YVCGKQVHALALKMGLIASVYVGNALITRYSKSCEDNFVGYGSEACR 115
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF +M +++VSWNSMIA + A+ LF ++ ++ + PD TF V+ +C G
Sbjct: 116 VFESMEFRNLVSWNSMIAAEEE------ALLLFRQLYREGLAPDWCTFSIVLKAC--AGF 167
Query: 353 VEE 355
V E
Sbjct: 168 VTE 170
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 221/400 (55%), Gaps = 28/400 (7%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C ++ G L +R+GF +V V + LI Y KC+ I + +F EM +N
Sbjct: 166 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 225
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSW +++AA+ Q + + LY R ++E +DF +S+LSAC G L GRS H
Sbjct: 226 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 285
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ I V ++L+ MY KCG +E++ F+ M K++V+ NS+I GYA G A
Sbjct: 286 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 345
Query: 322 IDLFEEMMKQRV--KPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCV 378
+ LFEEM + P+ +TF+ ++S+C G VE G FDSM + +G++P +HYSC+
Sbjct: 346 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 405
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECA 421
VD+LGRAG++E A +FIK+MPI P +W AAE+ L+P+ +
Sbjct: 406 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS 465
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
HV L+N +A W +A VR+ +K G+K G SWI + N V+ F+A+D+S+
Sbjct: 466 GNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNK 525
Query: 482 EILPVLDFLVDQMKTLGYVPEV--------HEEKVDDASH 513
EI L L ++M+ GY P++ EEK + SH
Sbjct: 526 EIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSH 565
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ RE + + A + S R G LA++ G I +V+VG S +Y K R
Sbjct: 48 EMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR 107
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA K+F+E+P RN+ +W A I+ + + +E + R PN TF + L+
Sbjct: 108 LRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLN 167
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC+ L G H +R GF + + V N LI Y KC + + +F M K+ VS
Sbjct: 168 ACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS 227
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W S++A Y Q+ +A L+ K V+ V+S+C +E G+
Sbjct: 228 WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 287
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K ++ + S +VD+ G+ G +E++ +MP
Sbjct: 288 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 322
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 1/229 (0%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+YSK A V P RNVVSWT++I+ AQ L + MR + PNDFT
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F A G+ H ++ G + V S MYCK ++A +F+ +
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++ +WN+ I+ G AI+ F E + P++ITF +++C + G
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + G ++ + ++D G+ + + +M NAV W
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT-KNAVSW 228
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S+ +++C + G A++ ++VGS+L+ +Y KC I D+ + F+EMP
Sbjct: 263 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 322
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSMLEPNDFTFTSILSACTGSGALGQG 255
+N+V+ ++I +A + QVDM L L+ M R PN TF S+LSAC+ +GA+ G
Sbjct: 323 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 382
Query: 256 -------RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNS 307
RS + I G Y + ++ M + G VE A M + +S W +
Sbjct: 383 MKIFDSMRSTY--GIEPGAEHY----SCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 436
Query: 308 MIAGYAQHG 316
+ HG
Sbjct: 437 LQNACRMHG 445
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 223/404 (55%), Gaps = 21/404 (5%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M+ + E +V ++ AV + S ++ G I+ GF +N+ V +S++ L
Sbjct: 198 LKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDL 257
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y +C + +A F EM +++++W +I+ + + L R + PN +TF
Sbjct: 258 YCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFV-PNCYTF 316
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-H 298
TS+++AC AL G+ H + R GF +++AN+LI MY KCGN+ ++ VF +
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD 376
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++VSW SM+ GY HG A++LF++M+ ++PD I F+ V+S+CRH GLVE+G
Sbjct: 377 RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK 436
Query: 359 YFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE--------- 408
YF+ M +++G+ P+ D Y+CVVDLLGRAG + EA + +++MP P+ W
Sbjct: 437 YFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Query: 409 ---------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
AA + L+P+ T+V L+ +YA W ARVRK+M+ G K G S
Sbjct: 497 KHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMS 556
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
WI + N V+ F DK S + VL L+++ + GYVPE+
Sbjct: 557 WILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPEL 600
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 157/319 (49%), Gaps = 15/319 (4%)
Query: 103 NVFDQLLDTPVVDVEKLISMH-------------HDLHRERLKVDASFLSTAVTSCGSTR 149
++FD++ D VV +I+ + H++ ++ + LS+ + SC + +
Sbjct: 66 SLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMK 125
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY-KVFEEMPVRNVVSWTAII 208
+ GA + ++ G ++YV ++++ +Y+ C V ++A +F ++ V+N V+WT +I
Sbjct: 126 VLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLI 185
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
F L++Y+ M E + T + A ++ G+ H I+ GF
Sbjct: 186 TGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQ 245
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
S + V NS++ +YC+CG + EA + F+ M KD+++WN++I+ + + A+ +F+
Sbjct: 246 SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMFQRF 304
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
Q P+ TF ++++C + + G+ + + G ++ + ++D+ + G +
Sbjct: 305 ESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNI 364
Query: 389 EEARDFIKQMPIYPNAVIW 407
+++ ++ N V W
Sbjct: 365 PDSQRVFGEIVDRRNLVSW 383
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 5/230 (2%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
+ ++LI Y + ++ +A +F+EMP R+VV+WTA+I +A E + M
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG-NVEEA 290
PN+FT +S+L +C L G H +++G + V N++++MY C +E A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCR 348
+F ++ K+ V+W ++I G+ G + + ++++M+ + V P IT + +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASA 224
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
V GK S+ K G + L + ++DL R G L EA+ + +M
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM 274
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%)
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
+A +LI Y + G VEEA +F+ M +D+V+W +MI GYA RA + F EM+KQ
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
P+ T V+ SCR+ ++ G + + K G++ L + ++++ + EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 393 DFIKQMPIYPNAVIW 407
I + N V W
Sbjct: 167 CLIFRDIKVKNDVTW 181
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/381 (38%), Positives = 216/381 (56%), Gaps = 24/381 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L A SCGS + R + T A+V + +I Y K + A ++F+ MP
Sbjct: 116 LVQAYCSCGSVASARR------VFDETAASADVVSWNVMIDGYVKSGDLARARELFDVMP 169
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RNVVSWT +I A+AQ Q + +E++R M+ +EP+ S+LSAC G + G
Sbjct: 170 GRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEW 229
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R G I + N++I MY KCG+V++A+ VF M K IV+W +MIAG+A HGL
Sbjct: 230 VHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGL 289
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYS 376
+ A++LF M K+ V P+ ITFL V+S C H GL + G+ YF +M +++ +KP ++HY
Sbjct: 290 GLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYG 349
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------------EAAESRLL----LEPE 419
C++DLLGRAG L EAR I+ MP NA IW E E LL LEP
Sbjct: 350 CMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIELEPH 409
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+ ++ L+N+YA WD +R M+D+GL+ PG S I++ +V+ F + D S+
Sbjct: 410 NSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDGMVHEFTSRDGSHPS 469
Query: 480 LSEILPVLDFLVDQMKTLGYV 500
L +I VL + +K++G++
Sbjct: 470 LHKIREVLCAINSNIKSVGHI 490
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I + + E ++ D L + +++CG + G +R G + + +++
Sbjct: 190 EEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAI 249
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y KC + A +VFE M +++V+WT +IA FA +EL+R M + PND
Sbjct: 250 IDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPND 309
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF ++LS C+ G GR + + ++ +I + + G + EA +
Sbjct: 310 ITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQ 369
Query: 296 NMHGK-DIVSWNSMIAGYAQHG 316
+M K + W +++A HG
Sbjct: 370 DMPFKANAAIWGALLAAARTHG 391
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 32/172 (18%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGL 317
H +R G + + SL+ YC CG+V A VF+ D+VSWN MI GY + G
Sbjct: 98 HSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKSGD 157
Query: 318 AVRAIDLFEEM-----------------MKQR--------------VKPDAITFLGVISS 346
RA +LF+ M MKQ ++PD + L V+S+
Sbjct: 158 LARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSA 217
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
C G+V+ G+ + + GL E+ + ++D+ + G +++A + + M
Sbjct: 218 CGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGM 269
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 227/378 (60%), Gaps = 6/378 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D +A +CG G A++TG+ +V+VGSS++ +Y+KC I DA
Sbjct: 6 VRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDAR 65
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F+EMP RNVVSW+ +I ++Q + + L L++ L+ NDFTF+S++ C S
Sbjct: 66 KMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNST 125
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L G+ H ++ + S V +SLIS+Y KCG +E+A VF+ + +++ WN+M+
Sbjct: 126 LLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLI 185
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
AQH +A DLF++M +KP+ ITFL V+ +C H GLVE+G+ YF+ M ++G++P
Sbjct: 186 ACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEP 245
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES--RLLLEPECA---ATHV 425
HY+ +VDLLGRAG L++A IK+MP+ P +W A + R+ + E A A V
Sbjct: 246 GAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFVADRV 305
Query: 426 -QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEIL 484
+L + + +++AAR RK+++D+G+K G SW+E N ++ F A D+S+ +I
Sbjct: 306 FELGPVSSAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIY 365
Query: 485 PVLDFLVDQMKTLGYVPE 502
L+ L ++M+ GY+ +
Sbjct: 366 KKLEELGEEMERAGYIAD 383
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDLHR-------------ERLKVDASFLSTAVTSCGSTRN 150
+FD++ D VV +I + + E L V+ S+ V CG++
Sbjct: 67 MFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTL 126
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G L ++T + ++ +VGSSLI+LYSKC VI DAY VF E+P+RN+ W A++ A
Sbjct: 127 LELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIA 186
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
AQ + +L++ M ++PN TF +L AC+ +G + +G+ G
Sbjct: 187 CAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPG 246
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYAQHG 316
Q S++ + + G +++AV + M + S W +++ G HG
Sbjct: 247 AQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHG 293
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M ++ + P+D F S AC G+S H ++ G+ + V +S++ MY KCG
Sbjct: 1 MLDNGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGE 60
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+ +A +F+ M +++VSW+ MI GY+Q G A+ LF++ + + + + TF V+
Sbjct: 61 IGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRV 120
Query: 347 CRHGGLVEEGKVYFDSMAKHG--LKPELDHYSCV----VDLLGRAGLLEEARDFIKQMPI 400
C + L+E GK HG LK D S V + L + G++E+A ++PI
Sbjct: 121 CGNSTLLELGK------QIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPI 174
Query: 401 YPNAVIWEA 409
N +W A
Sbjct: 175 R-NLGMWNA 182
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 214/386 (55%), Gaps = 20/386 (5%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E +K D ++ + SCG + G L IR F +V V S+L+ +YSK I D
Sbjct: 273 EGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIED 332
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A K F+ M V+N+VSWT +I + Q + L + M P++ SILS+C
Sbjct: 333 ARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGN 392
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A + H + GF +++ +AN+L+S Y KCG++ A F+++ DI+SW S+
Sbjct: 393 LSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSL 452
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HG 367
+ YA HGL+ +++FE+M+ V+PD + FLGV+S+C HGG V EG YF+ M +
Sbjct: 453 MGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQ 512
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA------------------VIWEA 409
+ P+ +HY+C++DLLGRAG L+EA + + MP+ P + W A
Sbjct: 513 IMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLARW-A 571
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
+E ++EP A + ++N+YA V W ARVRKLM+++ PGCSW+EI V+
Sbjct: 572 SEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMEIAGEVHT 631
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMK 495
F + DK++ R ++ +LD LV M+
Sbjct: 632 FVSRDKTHPRAVQVYGMLDLLVRLME 657
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 123/219 (56%), Gaps = 11/219 (5%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C +++GF +N +VGS+L+ Y+K ++ +A F+E+ R++V W +++ +A
Sbjct: 201 HCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQ 260
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
++++MR ++ ++FTFTS++++C G+ G G+ H IR+ F + VA++L
Sbjct: 261 GKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASAL 320
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ MY K N+E+A F+ M K+IVSW +MI GY QHG A+ L +EM++ PD
Sbjct: 321 VDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDE 380
Query: 338 ITFLGVISSCR-----------HGGLVEEGKVYFDSMAK 365
+ ++SSC H +VE G F S+A
Sbjct: 381 LALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIAN 419
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 5/276 (1%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
SF S A+ + GG I+ G + + + ++ +Y KC+ D K+F+E
Sbjct: 74 SFSSHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDE 133
Query: 196 MPVRNVVSWTAIIAAFAQE----WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
MP++NVVSW +I + V + +R M M+ PN T +L A
Sbjct: 134 MPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELND 193
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+G R HC ++ GF S V ++L+ Y K G V+EA F+ + +D+V WN M++
Sbjct: 194 VGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSC 253
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
YA +G+ +A +F+ M + VK D TF +I+SC G GK + + +
Sbjct: 254 YALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLD 313
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ S +VD+ + +E+AR M I N V W
Sbjct: 314 VLVASALVDMYSKNENIEDARKAFDGM-IVKNIVSW 348
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 215/389 (55%), Gaps = 25/389 (6%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G + +R GF + +V +SL+ +YS + AY+VFE M R+ V+W ++I FA
Sbjct: 155 GEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFAL 214
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ L LYR M + +EP+ FT S+LSAC GAL G H +++G
Sbjct: 215 NGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+N+L+ +Y KCGN +A VF+ M + +VSW S+I G A +GL A+ LF E+ +Q +
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGL 334
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEAR 392
KP ITF+GV+ +C H G+++EG YF M ++G+ P ++H+ C+VDLL RAG + +A
Sbjct: 335 KPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAY 394
Query: 393 DFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVR 435
D+I+ MP+ PNAVIW E A + + LE + V L+NLYA R
Sbjct: 395 DYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASER 454
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W VRK+M KG+K PG S +E+ N VY F D+S+ + E +L + +K
Sbjct: 455 RWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLK 514
Query: 496 TLGYVP-------EVHEEKVDDASHKRTE 517
GYVP ++ EE+ + A TE
Sbjct: 515 IEGYVPRTVNVLADIEEEEKETALSHHTE 543
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACT 247
A ++F ++ N+ +W +I FA+ +EL+ M S + P+ TF + A
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
+ G H +R GF S V NSL+ MY G++ A VF M +D V+WNS
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNS 207
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
+I G+A +G+ A+ L+ EM + V+PD T + ++S+C G + G+ M K G
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG 267
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L + ++DL + G +A+ +M
Sbjct: 268 LVQNQHASNALLDLYSKCGNFRDAQKVFDEM 298
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 2/199 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
++++ ++ E ++ D + + +++C + G ++ G + N + ++L+ L
Sbjct: 222 LTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDL 281
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSKC DA KVF+EM R+VVSWT++I A + L+L+ + L+P++ TF
Sbjct: 282 YSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITF 341
Query: 240 TSILSACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCGNVEEAV-YVFNNM 297
+L AC+ G L +G + + G I+ ++ + C+ G V +A Y+ N
Sbjct: 342 VGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMP 401
Query: 298 HGKDIVSWNSMIAGYAQHG 316
+ V W +++ HG
Sbjct: 402 VPPNAVIWRTLLGACTIHG 420
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 242/458 (52%), Gaps = 63/458 (13%)
Query: 110 DTPVVDVEKLISMHHDLHRERLK-------VDASFLSTAVT------SCGSTRNIRGGAP 156
DTPVV LIS H + RL V + T VT +CG + I G
Sbjct: 86 DTPVV-WNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQ 144
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
+ +G + ++ VG++LI +Y++C + A+++FE M VRN VSWT++I+ F + Q
Sbjct: 145 VHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQ 204
Query: 217 VDMC-------------------------------LELYRMMRNSMLEPNDFTFTSILSA 245
VD LE++R M+ S + ++FT S+++A
Sbjct: 205 VDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTA 264
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C GAL G A R G V N+L+ MY KCG++++A+ VF M+ +D +W
Sbjct: 265 CAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTW 324
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-A 364
++I G A +G AI++F M++ PD +TF+GV+++C H GLV++G+ +F SM
Sbjct: 325 TAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTG 384
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------------- 408
+G+ P + H+ C++DLLGRAG L+EA + I MP+ PN+ IW
Sbjct: 385 SYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQ 444
Query: 409 -AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
AAE L L+ E ++ L+NLYA W+ R+R+++ +KG+K PGCS IE+ +
Sbjct: 445 LAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTI 504
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
+ F A D+S+ EI LD ++ +K GYVP++ E
Sbjct: 505 HEFIAGDRSHPMSKEIYSKLDKVLTDLKDAGYVPDLTE 542
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 48/280 (17%)
Query: 162 IRTGFIANVYVGSSLITLYSK------CRVIIDAYKVFEEMPVRN---VVSWTAIIAAFA 212
++ G N +V SSL+ +Y+ R ++DA+ P R V W A+I+
Sbjct: 46 VKFGMELNAHVASSLVLMYAARGDGAVARTLLDAW------PARGGDTPVVWNALISGHR 99
Query: 213 QEWQVDM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
+ Q + C M+R ++ P T+ ++LSAC + G H + G +
Sbjct: 100 RSRQFRLSCCSFVDMVRTGVV-PTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDL 158
Query: 272 QVANSLISMYCKC-------------------------------GNVEEAVYVFNNMHGK 300
+V N+LI MY +C G V++A +F+ M +
Sbjct: 159 KVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPER 218
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D VSW +MI GY Q G A+++F EM +V+ D T + V+++C G +E G+
Sbjct: 219 DTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWAR 278
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
M++HG+K + + +VD+ + G +++A K+M I
Sbjct: 279 IYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYI 318
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ-GRSAHCQTIRMGFFSYIQVANSL 277
M L +Y M P+ +TF +L A T + G G + H ++ G VA+SL
Sbjct: 1 MLLRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSL 60
Query: 278 ISMYCKCGNVEEAVYVFNNM---HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
+ MY G+ A + + G V WN++I+G+ + + F +M++ V
Sbjct: 61 VLMYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVV 120
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
P +T++ V+S+C + G + G+ P+L + ++D+ ++ A +
Sbjct: 121 PTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWEL 180
Query: 395 IKQMPIYPNAVIWEAAESRLL 415
+ M + N V W + S L
Sbjct: 181 FEGMEVR-NTVSWTSVISGFL 200
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 226/396 (57%), Gaps = 23/396 (5%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R+ + ++ S+ + +CG+ + A I+ G ++V+V SSLI Y K
Sbjct: 164 EMRRDGVAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKLG 220
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ VF+EM ++V W +IIA FAQ +EL+ M+ S N T TS+L
Sbjct: 221 DLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLR 280
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
ACTG L GR H ++ + + + N+L+ MYCKCG + +A +F+ MH +D++S
Sbjct: 281 ACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVIS 338
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W++MI+G AQ+G +V A+ +F+ M + P+ IT +GV+ +C H GLVE+G YF SM
Sbjct: 339 WSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMD 398
Query: 365 K-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE--------------- 408
K G++PE +H +C+VDLLGRAG L+EA FI +M P++VIW
Sbjct: 399 KLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLA 458
Query: 409 --AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNV 466
AA L LEPE + L+N+YA +R W A + K M+D+G+K PG SWIE+ +
Sbjct: 459 SYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKL 518
Query: 467 VYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
V+ F A + S+ I+ L+ L+ + K LGYVP+
Sbjct: 519 VHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQ 554
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 126/233 (54%), Gaps = 10/233 (4%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE-WQVDMCLELYRMM 227
+++V +SL+++Y+K ++ DA ++F MP RNVVSWT ++AA A + L M
Sbjct: 106 SLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEM 165
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
R + N +TF+S+L AC G L + H I++G S + V +SLI Y K G++
Sbjct: 166 RRDGVAANSYTFSSVLGACGTPGVLA---AMHADIIKVGLDSDVFVRSSLIDAYMKLGDL 222
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ VF+ M D+V WNS+IAG+AQ G V A++LF M + + T V+ +C
Sbjct: 223 DSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRAC 282
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGRAGLLEEARDFIKQM 398
++E G+ + H LK + D ++ ++D+ + G L +A +M
Sbjct: 283 TGMVMLEVGR----QVHAHVLKYDRDLILHNALLDMYCKCGCLLDADALFSRM 331
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 218/388 (56%), Gaps = 28/388 (7%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G L R+GF +V V + LI Y KC+ I + +F EM ++N VSW +++AA+ Q
Sbjct: 228 GMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQ 287
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ + LY R ++E +DF +S+LSAC G L GRS H ++ I V
Sbjct: 288 NHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFV 347
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
++L+ MY KCG +E++ F+ M K++V+ NS+I GYA G A+ LFE+M +
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGC 407
Query: 334 --KPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEE 390
P+ +TF+ ++S+C G VE G FDSM + +G++P +HYSC+VD+LGRAG++E+
Sbjct: 408 GPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQ 467
Query: 391 ARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAG 433
A +FIK+MPI P +W AAE+ L+P+ + HV L+N +A
Sbjct: 468 AFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAA 527
Query: 434 VRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQ 493
W +A VR+ MK G+K G SWI + N V+ F+A+D+S+ EI +L L ++
Sbjct: 528 AGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNK 587
Query: 494 MKTLGYVPEV--------HEEKVDDASH 513
M+ GY P++ EEK + SH
Sbjct: 588 MEAAGYKPDLKLSLYDLEEEEKAAEVSH 615
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 128/275 (46%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ RE + + + S R G LA++ G I +V+VG S +Y K R
Sbjct: 98 EMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR 157
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA K+F+E+P RN+ +W A I+ + + +E + R +PN TF L+
Sbjct: 158 LRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLN 217
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC+ L G H R GF + + V N LI Y KC + + +F M K+ VS
Sbjct: 218 ACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVS 277
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W S++A Y Q+ +A L+ K+ V+ V+S+C +E G+
Sbjct: 278 WCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 337
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
K ++ + S +VD+ G+ G +E++ +MP
Sbjct: 338 KACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 1/237 (0%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
++ + LI +YSK A V P RNVVSWT++++ AQ L + MR
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRRE 102
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ PNDFTF + A G+ H ++ G + V S MYCK ++A
Sbjct: 103 GVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F+ + +++ +WN+ I+ G AI+ F E + +P++ITF G +++C G
Sbjct: 163 RKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDG 222
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
L++ G + + G ++ Y+ ++D G+ + + +M + NAV W
Sbjct: 223 LLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGM-KNAVSW 278
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK ++ +E ++ +S+ +++C + G A++ N++VGS+L
Sbjct: 292 EKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSAL 351
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSMLEP 234
+ +Y KC I D+ + F+EMP +N+V+ ++I +A + QVDM L L+ M R P
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAP 411
Query: 235 NDFTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
N TF S+LSAC+ +GA+ G + G + + ++ M + G VE+A
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEF 471
Query: 294 FNNMHGKDIVS-WNSMIAGYAQHGLAVRAIDLFEEMMK 330
M K +S W ++ HG I E + K
Sbjct: 472 IKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFK 509
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 243/462 (52%), Gaps = 36/462 (7%)
Query: 80 SKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDV----------------EKLISMH 123
S H D + TG S+ + + + PV DV ++ + +
Sbjct: 127 SSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELF 186
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
++ + ++ D + T +++C +R++ G GF +N+ + ++LI LYSKC
Sbjct: 187 KEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKC 246
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ A +FE + ++VVSW +I + L L++ M S PND T SIL
Sbjct: 247 GQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSIL 306
Query: 244 SACTGSGALGQGRSAHCQTIRM--GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
AC GA+ GR H + + + SLI MY KCG++E A VFN+M K
Sbjct: 307 PACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKS 366
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+ SWN+MI G+A HG A DLF M K ++PD ITF+G++S+C H G ++ G+ F
Sbjct: 367 LSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFK 426
Query: 362 SMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------- 407
SM + + + P+L+HY C++DLLG +GL +EA++ IK MP+ P+ VIW
Sbjct: 427 SMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNL 486
Query: 408 EAAES----RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
E AES + +EPE ++V L+N+YA WD+ A+VR L+ KG+K PGCS IEI
Sbjct: 487 ELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEI 546
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
+ V+ F DK + R EI +L+ + ++ G+VP+ E
Sbjct: 547 DSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSE 588
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 151/303 (49%), Gaps = 38/303 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC ++ G ++ G+ ++YV +SLI++Y++ + DA+KVF+ R+V
Sbjct: 73 LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132
Query: 202 VSWTAIIAAF--------AQE------------WQVDM-----------CLELYRMMRNS 230
VS+TA+I + AQE W + LEL++ M +
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT 192
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ P++ T ++LSAC S ++ GR H GF S +++ N+LI +Y KCG VE A
Sbjct: 193 NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F + KD+VSWN++I GY L A+ LF+EM++ P+ +T + ++ +C H
Sbjct: 253 CGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHL 312
Query: 351 GLVEEGK---VYFDSMAKHGLK-PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
G ++ G+ VY D K P L + ++D+ + G +E A M ++ +
Sbjct: 313 GAIDIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSM-LHKSLSS 369
Query: 407 WEA 409
W A
Sbjct: 370 WNA 372
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 111/234 (47%), Gaps = 31/234 (13%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF + N + W ++ +A L+LY +M + L PN +TF +L +C
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
S A +G+ H +++G+ + V SLISMY + G +E+A VF+ +D+VS+ ++
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 309 IAGYAQHG-----------LAVR--------------------AIDLFEEMMKQRVKPDA 337
I GYA G + V+ A++LF+EMMK V+PD
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
T + V+S+C VE G+ + HG L + ++DL + G +E A
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 223/418 (53%), Gaps = 31/418 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDLHRERLKVDA------SFLS-------TAVTSCGSTRN 150
+F+++ VV LIS + + E V+A S++S ++SC +
Sbjct: 282 LFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAA 341
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G +R G + + V +S+ITLYSKC ++ A VF + ++++SW+ II+
Sbjct: 342 AKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISV 401
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
++Q + MR +PN+F +S+LS C L QG+ H + +G
Sbjct: 402 YSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHE 461
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V +++ISMY KCG+V+EA +FN M DI+SW +MI GYA+HG + AI+LFE++
Sbjct: 462 AMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISS 521
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
+KPD + F+GV+++C H G+V+ G YF M + + P +HY C++DLL RAG L
Sbjct: 522 VGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLS 581
Query: 390 EARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYA 432
EA I+ MP + + V+W AE L L+P A TH+ LAN+YA
Sbjct: 582 EAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYA 641
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
W +AA +RKLMK KG+ G SW+ + + + F A D+++ + I VL L
Sbjct: 642 AKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLL 699
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 152/285 (53%), Gaps = 1/285 (0%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R ++ D+ + A+ + + + G I+ GF + +V ++L T+Y+KC
Sbjct: 215 EMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCG 274
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
++FE+M + +VVSWT +I+ + Q + + +E ++ MR S + PN +TF +++S
Sbjct: 275 KPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVIS 334
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
+C A G H +R+G + + VANS+I++Y KCG ++ A VF+ + KDI+S
Sbjct: 335 SCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIIS 394
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W+++I+ Y+Q G A A D M ++ KP+ V+S C L+E+GK +
Sbjct: 395 WSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLL 454
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ E +S ++ + + G ++EA M I + + W A
Sbjct: 455 CIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKI-NDIISWTA 498
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 130/258 (50%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D +S A+ +C NI G ++++G I +V+V S+LI +Y K I +VF
Sbjct: 123 DQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVF 182
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
E+M RNVVSWTAIIA L + M S + + TF L A S L
Sbjct: 183 EKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLH 242
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G++ H QTI+ GF V N+L +MY KCG + + +F M D+VSW ++I+ Y
Sbjct: 243 HGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYV 302
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q G A++ F+ M K V P+ TF VISSC + + G+ + + GL L
Sbjct: 303 QMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALS 362
Query: 374 HYSCVVDLLGRAGLLEEA 391
+ ++ L + GLL+ A
Sbjct: 363 VANSIITLYSKCGLLKSA 380
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
NS + K G + +A Y+F+ M +D +SW ++IAGY + A+ LF M V
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW---VH 117
Query: 335 P----DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
P D + +C G + G++ K GL + S ++D+ + G +E+
Sbjct: 118 PGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQ 177
Query: 391 A-RDFIKQMPIYPNAVIWEA 409
R F K M N V W A
Sbjct: 178 GCRVFEKMMT--RNVVSWTA 195
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 219/380 (57%), Gaps = 18/380 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+++A+ +C + ++ G L ++G ++ G+SL+++Y+K +I A +F++M
Sbjct: 338 VASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV 397
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
V++ VS++A+++ + Q + D ++R M+ ++P+ T S++ AC+ AL G+
Sbjct: 398 VKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKC 457
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I G S + N+LI MY KCG ++ + +F+ M +DIVSWN+MIAGY HGL
Sbjct: 458 GHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGL 517
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYS 376
A LF +M Q +PD +TF+ +IS+C H GLV EGK +F MA K+G+ P ++HY
Sbjct: 518 GKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYI 577
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--AESRL---------------LLEPE 419
+VDLL R G L+EA FI+ MP+ + +W A R+ L PE
Sbjct: 578 GMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPE 637
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
V L+N+++ +D+AA VR + K++G K +PGCSWIEI ++ F D+S+ +
Sbjct: 638 GTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQ 697
Query: 480 LSEILPVLDFLVDQMKTLGY 499
SEI LD ++ + LGY
Sbjct: 698 SSEIYQELDNILVDINKLGY 717
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 135/266 (50%), Gaps = 10/266 (3%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C + ++R C A R G A+++V ++L+ +Y+KC A VF MP R+V
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
V+W A++A +A + + +M++ PN T ++L GAL QGR+ H
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 262 TIRMGFF----SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
++R + V +L+ MY KCG++ A VF M ++ V+W++++ G+ G
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314
Query: 318 AVRAIDLFEEMMKQR---VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+ A LF++M+ Q + P ++ + +C + + GK +AK GL +L
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPI 400
+ ++ + +AGL+++A QM +
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVV 398
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 6/225 (2%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F+++P + + A+I A++ + R + +PN++TF +L AC+
Sbjct: 82 ARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSA 141
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
L R+ HC R G + + V+ +L+ +Y KC + A VF M +D+V+WN+M
Sbjct: 142 LLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAM 201
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS-SCRHGGLVEEGKVYFDSMAKHG 367
+AGYA HG I +M+ P+A T + ++ +HG L + V+ S+
Sbjct: 202 LAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACS 260
Query: 368 LKPELDHY---SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L D + ++D+ + G L A + M + N V W A
Sbjct: 261 LHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVR-NEVTWSA 304
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 116/254 (45%), Gaps = 21/254 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMH-------------HDLHRERLKVDASFLSTAVTSCGS 147
++ +FDQ++ V L+S + + ++ D + + + + +C
Sbjct: 389 ATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSH 448
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
++ G I G + + ++LI +Y+KC I + ++F+ MP R++VSW +
Sbjct: 449 LAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTM 508
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG-RSAHCQTIRMG 266
IA + L+ M++ EP+D TF ++SAC+ SG + +G R H + G
Sbjct: 509 IAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYG 568
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLF 325
++ ++ + + G ++EA M K D+ W +++ H + IDL
Sbjct: 569 ITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVH----KNIDLG 624
Query: 326 EEM--MKQRVKPDA 337
+++ M Q++ P+
Sbjct: 625 KQVSSMIQQLGPEG 638
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 211/383 (55%), Gaps = 19/383 (4%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C + + R G L ++G ++ Y+ ++LI LYS AYKVF++MP R+V
Sbjct: 108 LKACSKSGHARFGKQIHGLVFKSGVGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRDV 167
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWT+II F + + L+ M + +EPN+ T S+L AC +GAL G H
Sbjct: 168 VSWTSIIDGFVDNDRPIEAIRLFTHMIENGIEPNEVTVASVLRACADTGALNTGERIHSF 227
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
F S V+ +LI MY KCG ++ A+ VF+ KD+ W ++IAG A HGL ++A
Sbjct: 228 VKEKNFSSNANVSTALIDMYAKCGCIDGALEVFDETLEKDVYVWTAIIAGLASHGLCMKA 287
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
I+ FE M K VK D V+S+ R+ GLV EG ++F + KH +KP + HY CVVD+
Sbjct: 288 IEFFENMKKSDVKMDERAITAVLSAYRNAGLVSEGLLFFRRLKKHKIKPTIQHYGCVVDM 347
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA------------AESRLLLEPEC-------AA 422
L RAG L++A +FI++MPI P+AV+W RL+ E E
Sbjct: 348 LTRAGRLKDAEEFIRKMPIEPDAVLWRTLIWGCKILGDVERSERLVRELELLNMDSRDTG 407
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
++V L N+YA W++ A+ R+LM +GL P CS IEI VV+ F A D + +
Sbjct: 408 SYVLLENVYAATGKWEEKAKTRELMYQRGLMKPPACSRIEIDGVVHEFTAGDSRHDEATA 467
Query: 483 ILPVLDFLVDQMKTLGYVPEVHE 505
+ L+ + ++++ GY P V E
Sbjct: 468 VYEKLEDVEERLRGEGYNPIVSE 490
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 102/227 (44%), Gaps = 7/227 (3%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN------SMLEPNDFTFTSI 242
A + + N + +I A++ L+ M+N ++ P+ FT+ +
Sbjct: 48 ARHILRTLHTPNSFYYNTMIRAYSDSTDPTRAFTLFLYMQNPDDASVAVPRPDHFTYPFV 107
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
L AC+ SG G+ H + G S + N+LI +Y G A VF+ M +D+
Sbjct: 108 LKACSKSGHARFGKQIHGLVFKSGVGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRDV 167
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
VSW S+I G+ + + AI LF M++ ++P+ +T V+ +C G + G+
Sbjct: 168 VSWTSIIDGFVDNDRPIEAIRLFTHMIENGIEPNEVTVASVLRACADTGALNTGERIHSF 227
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + + + ++D+ + G ++ A + + + + +W A
Sbjct: 228 VKEKNFSSNANVSTALIDMYAKCGCIDGALEVFDET-LEKDVYVWTA 273
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+++ + +C T + G F +N V ++LI +Y+KC I A +VF+E
Sbjct: 205 VASVLRACADTGALNTGERIHSFVKEKNFSSNANVSTALIDMYAKCGCIDGALEVFDETL 264
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++V WTAIIA A +E + M+ S ++ ++ T++LSA +G + +G
Sbjct: 265 EKDVYVWTAIIAGLASHGLCMKAIEFFENMKKSDVKMDERAITAVLSAYRNAGLVSEGLL 324
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQHG 316
+ + IQ ++ M + G +++A M D V W ++I G G
Sbjct: 325 FFRRLKKHKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRKMPIEPDAVLWRTLIWGCKILG 384
Query: 317 LAVRAIDLFEEM 328
R+ L E+
Sbjct: 385 DVERSERLVREL 396
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 223/402 (55%), Gaps = 18/402 (4%)
Query: 122 MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
+ D+ + + + S + + +++C + + G + G +N+ + ++LI +YS
Sbjct: 248 LFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYS 307
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
KC + A ++F++M R+V+SW +I + L L+R M S +EP + TF S
Sbjct: 308 KCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLS 367
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
IL +C GA+ G+ H + ++ SLI +Y KCGN+ A VF+ M K
Sbjct: 368 ILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKS 427
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+ SWN+MI G A HG A +A +LF +M ++P+ ITF+G++S+C+H GLV+ G+ +F
Sbjct: 428 LASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFS 487
Query: 362 SMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----------- 409
SM + + + P+ HY C++DLLGRAGL EEA ++ M + P+ IW +
Sbjct: 488 SMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRV 547
Query: 410 ------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
AE LEP+ +V L+N+YAG WD AR+R + D+G+K PGC+ IE+
Sbjct: 548 ELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEV 607
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
NVV+ F DK + + +I +L+ + +Q+K G+V + E
Sbjct: 608 DNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSE 649
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 145/290 (50%), Gaps = 31/290 (10%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK------CRVIID------- 188
+ SC + G ++ GF+++V++ +SLI +Y++ +++ D
Sbjct: 136 LKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDA 195
Query: 189 ------------------AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
A ++F+EMPV++VVSW A+IA +AQ + L L+ MR +
Sbjct: 196 ISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKA 255
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ PN+ T S+LSAC S AL G S G S +++ N+LI MY KCG+++ A
Sbjct: 256 NVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTA 315
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F++M +D++SWN MI GY A+ LF EM+ V+P ITFL ++ SC H
Sbjct: 316 RELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHL 375
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
G ++ GK + K+ + ++DL + G + AR M I
Sbjct: 376 GAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKI 425
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 33/270 (12%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRV--IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
I+TG ++ S LI + R I A +F + N+ W ++I + +
Sbjct: 53 IKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPAL 112
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L + M S +EPN +TF +L +C + +G+ H +++GF S + + SLI+
Sbjct: 113 ALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLIN 172
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSM------------------------------- 308
MY + G + A VF+ + +D +S+ ++
Sbjct: 173 MYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAM 232
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
IAGYAQ G + A+ LFE+M K V P+ T + V+S+C ++ G + GL
Sbjct: 233 IAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL 292
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L + ++D+ + G L+ AR+ M
Sbjct: 293 CSNLKLVNALIDMYSKCGDLQTARELFDDM 322
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLI--SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
+ H I+ G + + + LI S + G++ A+ +FN++ ++ WNSMI G +
Sbjct: 46 KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
A+ F M+ V+P++ TF ++ SC EGK + K G ++
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVF 165
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAG 433
++ ++++ ++G E ++L+ + + L AG
Sbjct: 166 IHTSLINMYAQSG---------------------EMNNAQLVFDQSNFRDAISFTALIAG 204
Query: 434 VRCWDQAARVRKLMKDKGLK 453
W R R+L + +K
Sbjct: 205 YALWGYMDRARQLFDEMPVK 224
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 227/400 (56%), Gaps = 18/400 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ ++ + + LK D A+ SC +++ G + G +++V ++L+ +
Sbjct: 803 LELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDM 862
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I A VF++M VR++VSWT++I+ +A L + +MR+S + PN +
Sbjct: 863 YAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSI 922
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+L AC GAL +G H I+ GF I VA +++ MY KCG+++ A +F+ G
Sbjct: 923 LSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAG 982
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
KD+V W++MIA Y HG +AIDLF++M+K V+P +TF V+S+C H GL+EEGK+Y
Sbjct: 983 KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMY 1042
Query: 360 FDSMAKHG-LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F M + + +L +Y+C+VDLLGRAG L EA D I+ MP+ P+A IW
Sbjct: 1043 FQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHN 1102
Query: 408 ------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
+ A+ L+P A HV L+N+YA W++ +VRK+M +G G S +
Sbjct: 1103 NLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLV 1162
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
E N V++F D+S+ + ++ L+ L MK LGYVP
Sbjct: 1163 EYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVP 1202
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 223/403 (55%), Gaps = 19/403 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ H++ +R + ++ + +A+ +C +RN+ G +A+ GF + V ++LI +
Sbjct: 292 LNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDM 351
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC +A +F+ +P ++VVSW A+++ +AQ + ++R M + ++P+
Sbjct: 352 YMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAV 411
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
IL+A + G Q H +R GF S + V SLI +Y KCG++ +AV +F M
Sbjct: 412 VKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIV 471
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHGGLVEEGKV 358
+D+V W+SMIA Y HG A+++F++M+K V+P+ +TFL ++S+C H GLVEEG
Sbjct: 472 RDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLK 531
Query: 359 YFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------- 407
FD M + L+P+ +H+ +VDLLGR G L +A D I +MPI +W
Sbjct: 532 IFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIH 591
Query: 408 -------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
AA++ L+P A ++ L+N+YA WD A +R +K++GLK G S
Sbjct: 592 HNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSM 651
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+E+ V+ F A D+ + +I +L L QM Y+P++
Sbjct: 652 VEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDL 694
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 146/277 (52%), Gaps = 1/277 (0%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D L + V++C N++ G+ L IR F ++ + +SL+ LY+K A +
Sbjct: 204 LDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANL 263
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F +MP ++V+SW+ +IA +A + L L+ M EPN T S L AC S L
Sbjct: 264 FSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNL 323
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+G+ H + GF V+ +LI MY KC +EAV +F + KD+VSW ++++GY
Sbjct: 324 EEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGY 383
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
AQ+G+A +++ +F M+ ++PDA+ + ++++ G+ ++ + + G +
Sbjct: 384 AQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNV 443
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +++L + G L +A K M I + VIW +
Sbjct: 444 FVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSS 479
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 149/327 (45%), Gaps = 16/327 (4%)
Query: 72 IQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERL 131
+ FL +D H DSQK + G V+ LD + D ++ +R+
Sbjct: 658 VHSFLASDRFHPDSQKIYELLRKLEAQMGK-EVYIPDLDFLLHDTGAVLQF-----WQRI 711
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLA------IRTGFIANVYVGSSLITLYSKCRV 185
K S T + S T I + + CL G + + + +Y
Sbjct: 712 KATESKYKT-IGSAPGTDTI---SCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNR 767
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I A VFE++P W +I FA + + LELY M L+P+ F F L +
Sbjct: 768 IDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKS 827
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G L +G+ H + G + + V +L+ MY KCG++E A VF+ M +D+VSW
Sbjct: 828 CAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSW 887
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
SMI+GYA +G + F+ M V P+ ++ L V+ +C + G + +G+ + + +
Sbjct: 888 TSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQ 947
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEAR 392
G + ++ + ++D+ + G L+ AR
Sbjct: 948 TGFEFDILVATAIMDMYSKCGSLDLAR 974
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 7/243 (2%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+TG + + + + L +LY+KC + A KVF+E P NV W + + ++ +E Q + L
Sbjct: 28 FKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETL 87
Query: 222 ELYRMMRNSMLE-PNDFTFTSILSACTGSGALGQGRSAHC---QTIRMGFFSYIQVANSL 277
L+ +M + E P++FT L AC G L G+ H + +G S + V ++L
Sbjct: 88 RLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIG--SDMFVGSAL 145
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQRVKPD 336
+ +Y KCG + EA+ VF D V W SM+ GY Q+ A+ LF +M M V D
Sbjct: 146 VELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLD 205
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+T + V+S+C V+ G + + +L + +++L + G + A +
Sbjct: 206 PVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFS 265
Query: 397 QMP 399
+MP
Sbjct: 266 KMP 268
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H + G ++ MY ++ A VF ++ WN MI G+A
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G + +++L+ +MM++ +KPD F + SC ++ GKV + G +L
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPI 400
+ +VD+ + G +E AR +M +
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAV 881
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 8/163 (4%)
Query: 251 ALGQGRSA---HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
A GRS H Q + G A L S+Y KC +++ A VF+ ++ WNS
Sbjct: 13 ACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNS 72
Query: 308 MIAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+ Y + + LF M+ PD T + +C ++E GKV AK
Sbjct: 73 TLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKV-IHGFAKK 131
Query: 367 GLKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ D + S +V+L + G + EA ++ P+ V+W
Sbjct: 132 NDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLW 173
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/516 (30%), Positives = 252/516 (48%), Gaps = 58/516 (11%)
Query: 37 KQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTN 96
K SS LH A +V D I + S T + + + + L+ N N
Sbjct: 196 KCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 97 STFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAP 156
+ S V + V +++S +++D + + +C + ++ G
Sbjct: 256 AMI-SGYVNRGFYQEALEMVRRMVS-------SGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE-- 214
+R + + +SL++LY KC +A +FE+MP +++VSW A+++ +
Sbjct: 308 VHAYVLRREDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 215 ------------------WQV-----------DMCLELYRMMRNSMLEPNDFTFTSILSA 245
W + + L+L+ M+ EP D+ F+ + +
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C GA G+ H Q +++GF S + N+LI+MY KCG VEEA VF M D VSW
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N++IA QHG A+D++EEM+K+ ++PD IT L V+++C H GLV++G+ YFDSM
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------------- 408
+ + P DHY+ ++DLL R+G +A I+ +P P A IWE
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 409 -AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
AA+ L PE T++ L+N++A W++ ARVRKLM+D+G+K CSWIE+ V
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ F +D S+ + L L +M+ LGYVP+
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDT 702
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 141/320 (44%), Gaps = 69/320 (21%)
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKC----RVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
+ A+++G V ++L+++YSKC ++ A KVF+E+ ++ SWT ++ +
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 213 QEWQVDM--------------------------------CLELYRMMRNSMLEPNDFTFT 240
+ D+ LE+ R M +S +E ++FT+
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S++ AC +G L G+ H +R FS+ NSL+S+Y KCG +EA +F M K
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMPAK 349
Query: 301 DIVSWNSMIAGY-------------------------------AQHGLAVRAIDLFEEMM 329
D+VSWN++++GY A++G + LF M
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
++ +P F G I SC G G+ Y + K G L + ++ + + G++E
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVE 469
Query: 390 EARDFIKQMPIYPNAVIWEA 409
EAR + MP ++V W A
Sbjct: 470 EARQVFRTMPCL-DSVSWNA 488
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 48/297 (16%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
+++++ Y I A VFE+ PV R+ V + A+I F+ + L+ M++
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 232 LEPNDFTFTSILSACT-GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN---- 286
+P++FTF S+L+ + Q H ++ G V+N+L+S+Y KC +
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 287 VEEAVYVFNNMHGKD--------------------------------IVSWNSMIAGYAQ 314
+ A VF+ + KD +V++N+MI+GY
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK-VYFDSMAKHGLKPELD 373
G A+++ M+ ++ D T+ VI +C GL++ GK V+ + + D
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD 323
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANL 430
+ +V L + G +EAR ++MP + V W A LL ++ H+ A L
Sbjct: 324 --NSLVSLYYKCGKFDEARAIFEKMPA-KDLVSWNA-----LLSGYVSSGHIGEAKL 372
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 33/129 (25%)
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG----------- 299
+L R+ H I GF + N LI +YCK + A +F+ +
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 300 ----------------------KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+D V +N+MI G++ + AI+LF +M + KPD
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 338 ITFLGVISS 346
TF V++
Sbjct: 149 FTFASVLAG 157
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 217/382 (56%), Gaps = 18/382 (4%)
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
A+ +C ++ G L + ++V V +SLI++YSKC+ + A +F+ + +
Sbjct: 238 ALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKT 297
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
+VSW A+I +AQ V+ L + M++ ++P+ FT S++ A Q + H
Sbjct: 298 LVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHG 357
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
IR + V +L+ MY KCG + A +F+ M+ + +++WN+MI GY HGL
Sbjct: 358 LVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKT 417
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVV 379
+++LF+EM K +KP+ ITFL +S+C H GLVEEG +F+SM K +G++P +DHY +V
Sbjct: 418 SVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMV 477
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAA 422
DLLGRAG L +A DFI++MPI P ++ +AA L P+
Sbjct: 478 DLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGG 537
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
HV LAN+YA W + A+VR +M+ GL+ PGCS +EI N V+ F + S+ + +
Sbjct: 538 YHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKK 597
Query: 483 ILPVLDFLVDQMKTLGYVPEVH 504
I L+ LVD+++ GYVP+ +
Sbjct: 598 IYSYLETLVDEIRAAGYVPDTN 619
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 150/290 (51%), Gaps = 4/290 (1%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
CG +++ G I +GF N++ + ++ +Y+KCR I DAY +F+ MP R++V W
Sbjct: 40 CGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCW 99
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+I+ +AQ + L L M P+ T SIL A + L G + H +R
Sbjct: 100 NTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLR 159
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
GF S + V+ +L+ MY KCG+V A +F+ M + +VSWNSMI GY Q G A A+ +
Sbjct: 160 AGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLI 219
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F++M+ + V+P +T +G + +C G +E GK + + L ++ + ++ + +
Sbjct: 220 FQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSK 279
Query: 385 AGLLEEARDFIKQMP----IYPNAVIWEAAESRLLLEPECAATHVQLANL 430
++ A D K + + NA+I A++ + E A +Q N+
Sbjct: 280 CKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNI 329
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 5/291 (1%)
Query: 119 LISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
++ M + HR D+ + + + + TR +R G +R GF + V V ++L+
Sbjct: 119 VLRMSEEGHRP----DSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVD 174
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+YSKC + A +F+ M R VVSW ++I + Q + + +++ M + ++P + T
Sbjct: 175 MYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVT 234
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
L AC G L +G+ H ++ S + V NSLISMY KC V+ A +F N+
Sbjct: 235 VMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR 294
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
K +VSWN+MI GYAQ+G A++ F EM + +KPD+ T + VI + + + K
Sbjct: 295 NKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKW 354
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + L + + +VD+ + G + AR M + + W A
Sbjct: 355 IHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNA-RHVITWNA 404
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 1/203 (0%)
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
++ +A+ +D L + M++ + P + FT +L C + L +G+ H I G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
F + +++MY KC + +A +F+ M +D+V WN+MI+GYAQ+G A A+ L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
M ++ +PD+IT + ++ + L+ G + + G + ++ + +VD+ + G
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 387 LLEEARDFIKQMPIYPNAVIWEA 409
+ AR M + V W +
Sbjct: 181 SVSIARVIFDGMD-HRTVVSWNS 202
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 206/371 (55%), Gaps = 18/371 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ +++C + + G +R G + + V +S++TLYSK ++ A VF +
Sbjct: 362 FAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGIT 421
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++++SW+ IIA ++Q + MR +PN+F +S+LS C L QG+
Sbjct: 422 RKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQ 481
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + +G V ++LISMY KCG+VEEA +FN M +I+SW +MI GYA+HG
Sbjct: 482 VHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGY 541
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYS 376
+ AI+LFE++ +KPD +TF+GV+++C H G+V+ G YF M ++ + P +HY
Sbjct: 542 SQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYG 601
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
C++DLL RAG L EA I+ MP Y + V+W AE L L+P
Sbjct: 602 CIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPN 661
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
A TH+ LAN+YA W +AA +RKLMK KG+ G SW+ + + + F A D+++ +
Sbjct: 662 SAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQ 721
Query: 480 LSEILPVLDFL 490
I VL+ L
Sbjct: 722 SEHITTVLELL 732
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 146/280 (52%), Gaps = 1/280 (0%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
++ D+ + A+ + + + G I+ GF + +V ++L T+Y+KC
Sbjct: 253 KVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYV 312
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
++FE+M + +VVSWT +I + Q+ + + +E ++ MR S + PN +TF +++SAC
Sbjct: 313 MRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANL 372
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
G H +R+G + VANS++++Y K G ++ A VF+ + KDI+SW+++I
Sbjct: 373 AIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTII 432
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
A Y+Q G A A D M ++ KP+ V+S C L+E+GK + G+
Sbjct: 433 AVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGID 492
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
E +S ++ + + G +EEA M I N + W A
Sbjct: 493 HEAMVHSALISMYSKCGSVEEASKIFNGMKI-NNIISWTA 531
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 177/393 (45%), Gaps = 31/393 (7%)
Query: 27 IYRSFCSQKLKQISSSKSLHKALRVL--DIISPRTRDSTKTEVHLR-LIQDFLQTDSKHL 83
++RS+ S + SLH V ++ SP T S T R LIQ Q + L
Sbjct: 24 LHRSYASSPALALHPPSSLHSMTAVFSRNLDSPLTYSSPGTATECRELIQ---QAKQEQL 80
Query: 84 DSQKFN-HDFTGTNSTFG----------SSNVFDQLLDTPVVD--------------VEK 118
++ H+ NS S +FD++ + E
Sbjct: 81 AQNAYSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEA 140
Query: 119 LISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
LI + + L+ D +S A+ +CG NI G ++++G I +V+V S+LI
Sbjct: 141 LILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALID 200
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y K I +VF++M RNVVSWTAIIA L + M S + + T
Sbjct: 201 MYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHT 260
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F L A S L G++ H QTI+ GF V N+L +MY KCG + + +F M
Sbjct: 261 FAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMK 320
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
D+VSW ++I Y Q G A++ F+ M K V P+ TF VIS+C + + + G+
Sbjct: 321 MPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQ 380
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ + GL L + +V L ++GLL+ A
Sbjct: 381 IHGHVLRLGLVDALSVANSIVTLYSKSGLLKSA 413
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE K + LS+ ++ CGS + G + G V S+LI++YSKC
Sbjct: 451 MRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGS 510
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ +A K+F M + N++SWTA+I +A+ + L+ + + L+P+ TF +L+A
Sbjct: 511 VEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTA 570
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANS------------LISMYCKCGNVEEAVYV 293
C+ H + +GF+ ++ + N +I + C+ G + EA ++
Sbjct: 571 CS-----------HAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHM 619
Query: 294 FNNM--HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+M + D+V W++++ HG R E+++ R+ P++
Sbjct: 620 IRSMPCYTDDVV-WSTLLRSCRVHGDVDRGRWTAEQLL--RLDPNS 662
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/381 (38%), Positives = 215/381 (56%), Gaps = 24/381 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L A SCGS + R + T A+V + +I Y K + A ++F+ MP
Sbjct: 112 LVQAYCSCGSVASARR------VFDETAAYADVVSWNVMIDGYVKSGDLARARELFDVMP 165
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RNVVSWT +I A+AQ Q + +E++R M+ +EP+ S+LSAC G + G
Sbjct: 166 GRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEW 225
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R G I + N++I MY KCG+V++A+ VF M K IV+W +MIAG+A HGL
Sbjct: 226 VHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGL 285
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYS 376
A++LF M K+ V P+ ITFL V+S C H GL + G+ YF +M +++ +KP ++HY
Sbjct: 286 GSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYG 345
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------------EAAESRLL----LEPE 419
C++DLLGRAG L EAR I+ MP NA IW E E LL LEP
Sbjct: 346 CMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIELEPH 405
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+ ++ L+N+YA WD +R M+D+GL+ PG S I++ +V+ F + D S+
Sbjct: 406 NSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDGMVHEFTSRDGSHPS 465
Query: 480 LSEILPVLDFLVDQMKTLGYV 500
L +I VL + +K++G++
Sbjct: 466 LHKIREVLCAINSNIKSVGHI 486
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I + + E ++ D L + +++CG + G +R G + + +++
Sbjct: 186 EEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAI 245
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y KC + A +VFE M +++V+WT +IA FA +EL+R M + PND
Sbjct: 246 IDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPND 305
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF ++LS C+ G GR + + ++ +I + + G + EA +
Sbjct: 306 ITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQ 365
Query: 296 NMHGK-DIVSWNSMIAGYAQHG 316
+M K + W +++A HG
Sbjct: 366 DMPFKANAAIWGALLAAARTHG 387
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 32/172 (18%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYAQHGL 317
H +R G + + SL+ YC CG+V A VF+ D+VSWN MI GY + G
Sbjct: 94 HSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKSGD 153
Query: 318 AVRAIDLFEEM-----------------MKQR--------------VKPDAITFLGVISS 346
RA +LF+ M MKQ ++PD + L V+S+
Sbjct: 154 LARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSA 213
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
C G+V+ G+ + + GL E+ + ++D+ + G +++A + + M
Sbjct: 214 CGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGM 265
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 228/399 (57%), Gaps = 22/399 (5%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V+ + +H +L + D++ L+ + C N+ G ++ G +V V ++
Sbjct: 355 VDAFLGLHDELG---INFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATA 411
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE-WQVDMCLELYRMMRNSMLEP 234
L+ LY+KC + A VF+ + + + S+ AI+A F + + + L+ +R + ++P
Sbjct: 412 LVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKP 471
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ TF+ +LS +L +GRS H T++ GF + I VANS+ISMY KCG++E+A +F
Sbjct: 472 DMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMF 531
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
N M+ +D +SWN++I+ YA HG A +++ LFEEM ++ PD T L ++ +C + GL +
Sbjct: 532 NIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWK 591
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
+G F+ M K+G+KP L+HY+C+ DLLGRAG L EA D IK+ P + ++W
Sbjct: 592 DGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNV 651
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A++ L L P A +++ ++N+YA + D+AA+VRK+M D +
Sbjct: 652 CKLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEA 711
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
G SWIEI N V+ F A DK + EI L+ L D+MK
Sbjct: 712 GSSWIEIDNKVHHFVASDKDHPESREIYTRLELLTDEMK 750
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 140/279 (50%), Gaps = 1/279 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + S+ D+H+ + + + +C S + G C I++GF NV+VG+
Sbjct: 148 DFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGT 207
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SLI +Y+K A KVF+ M +++ +I + + +E+++ + N EP
Sbjct: 208 SLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEP 267
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
D+TFT+I+S C G + +G+ + GF S V N++I+MY G +EA +F
Sbjct: 268 TDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMF 327
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLV 353
++M K+++SW ++I+GY++ G +A+D F + + + D+ ++ C +
Sbjct: 328 SSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNL 387
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
E G + K G +++ + +VDL + L+ AR
Sbjct: 388 ELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSAR 426
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 2/266 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
S GS + G A + L ++ G + + G++++ LY K + A KVF+ M RN ++
Sbjct: 77 SIGSRDFLLGQAVHSYL-VKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTIT 135
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT++I + ++ + M N+ T T IL AC+ G HC I
Sbjct: 136 WTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVI 195
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ GF + V SLI+MY K G + A VF++M KDI N MI Y + G +AI+
Sbjct: 196 KSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIE 255
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F+ ++ +P TF +IS+C VEEGK K+G E + ++ + G
Sbjct: 256 VFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYG 315
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+G+ +EA M N + W A
Sbjct: 316 NSGMPKEAERMFSSMS-EKNLISWTA 340
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D E + + + L +K D S ++ + ++ G + ++TGF N+ V +
Sbjct: 453 DEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVAN 512
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
S+I++Y+KC I DA+++F M R+ +SW A+I+A+A Q L L+ M+ +P
Sbjct: 513 SVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDP 572
Query: 235 NDFTFTSILSACTGSGALGQG 255
++FT +IL ACT SG G
Sbjct: 573 DEFTILAILQACTYSGLWKDG 593
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 218/367 (59%), Gaps = 19/367 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+V +++IT Y K I A ++FE+MP +N+V+W A+IA + + + + ++L+R M
Sbjct: 130 SVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMV 189
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
++PN T +S L C+ AL GR H + SLISMYCKCG +E
Sbjct: 190 GFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLE 249
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+ +F + +D+V+WN+MI+GYAQHG +A+ LF+EM+++ +KPD ITF+ V+ +C
Sbjct: 250 DGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACN 309
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H G + G YF SMAK +GL + DHY+C+VDLLGRAG L EA D I++MP P+A ++
Sbjct: 310 HAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVF 369
Query: 408 ----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
E A +LL L+P A +VQLAN+YA + WD ARVRK MK
Sbjct: 370 GTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSC 429
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
+ PG SWIE+ ++ ++FR+ DK + L+ I L L +MK GYVP++ E + D
Sbjct: 430 KVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDL-EFALHD 488
Query: 511 ASHKRTE 517
++ E
Sbjct: 489 VGEEQKE 495
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++++ Y + + A FE+MP+++ SW +I FAQ Q+D +L+ +M
Sbjct: 42 NTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTK--- 98
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
N T+ +++S G L + + F + ++I+ Y K G + A +
Sbjct: 99 -NVVTWNAMISGYVECGDL----DSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERL 153
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M K++V+WN+MIAGY ++ A + LF M+ ++P++ T + C +
Sbjct: 154 FEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSAL 213
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G+ + K L + + ++ + + G+LE+ Q+P + V W A
Sbjct: 214 QLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVP-RRDVVTWNA 268
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 214/386 (55%), Gaps = 19/386 (4%)
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+C N+ G + + GF +V V +S++ Y KCR + A VF+ M VRN V
Sbjct: 230 NACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNV 289
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SW +++ A+AQ + +Y R + EP DF +S+L+ C G L GR+ H
Sbjct: 290 SWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVA 349
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+R S I VA++L+ MY KCG +E+A VF M +++V+WN+MI GYA G A A+
Sbjct: 350 VRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNAL 409
Query: 323 DLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVD 380
+F++M M Q P+ IT + V+++C GGL +EG F +M + G++P ++HY+CVVD
Sbjct: 410 SVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVD 469
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAAT 423
LL RAG+ E A I+ MP+ P+ +W AAE L+P+ +
Sbjct: 470 LLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFELDPQDSGN 529
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
HV L+N+ A W +A VRK MK+ G+K +PG SWI NVV+ F+A+D ++ EI
Sbjct: 530 HVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREI 589
Query: 484 LPVLDFLVDQMKTLGYVPEVHEEKVD 509
+L L QM+ GY+P+ D
Sbjct: 590 QALLAKLKGQMQAAGYMPDTQYALYD 615
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 2/257 (0%)
Query: 154 GAPYQCLAIRTGFIAN-VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G LA+R G++ + +V + + +Y K + A ++F+EMP RNVV+W A++
Sbjct: 139 GTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAV 198
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + +E Y +R + PN + + +AC G L G + + GF +
Sbjct: 199 LDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVS 258
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V+NS++ Y KC V +A VF+ M ++ VSW SM+ YAQ+G A ++ +
Sbjct: 259 VSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAG 318
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+P V+++C ++ G+ + + + S +VD+ G+ G +E+A
Sbjct: 319 EEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAE 378
Query: 393 DFIKQMPIYPNAVIWEA 409
+MP N V W A
Sbjct: 379 QVFFEMP-QRNLVTWNA 394
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S+ +T+C + G +A+R+ +N++V S+L+ +Y KC I DA +VF EMP
Sbjct: 326 VSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMP 385
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
RN+V+W A+I +A L ++ +M+ PN T ++L+AC+ G +G
Sbjct: 386 QRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGY 445
Query: 257 SAHCQTI--RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYA 313
QT+ R G I+ ++ + C+ G E A + M + +S W +++ G
Sbjct: 446 ELF-QTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCK 504
Query: 314 QHG 316
HG
Sbjct: 505 MHG 507
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 4/277 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA-NVYVGSSLITLYSKCRVIIDAYKV 192
DA L+ AV + +TR+ R G A+R A ++ + L+ LYSK + A
Sbjct: 16 DAQLLAGAVEAAIATRSARLGRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAAS 75
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS-ACTGSGA 251
P VVS+TA I+ AQ + L + M L PNDFTF S A +
Sbjct: 76 LAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPR 135
Query: 252 LGQGRSAHCQTIRMGFFSYIQ-VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G H +R G+ V+ + + MY K G + A +F+ M +++V+WN+++
Sbjct: 136 SAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMT 195
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G + ++ + + P+ ++ ++C + G+ ++ +AK G
Sbjct: 196 NAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGK 255
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ + VVD G+ + +AR M + N V W
Sbjct: 256 DVSVSNSVVDFYGKCRCVGKARAVFDGMGVR-NNVSW 291
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 230/409 (56%), Gaps = 19/409 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN-VYVGSS 175
EK + + + + + +D + + + + + G AI++G N V + ++
Sbjct: 357 EKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNA 416
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+ Y+KC + D KVF M R+++SWT+++ A++Q + D +E++ MR + PN
Sbjct: 417 VANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPN 476
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
FTF+S+L +C L G+ H ++G + ++L+ MY KCG + +A VFN
Sbjct: 477 QFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFN 536
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ D VSW ++IAG+AQHG+ A+ LF M++ V+P+A+TFL V+ +C HGGLVEE
Sbjct: 537 RISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEE 596
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
G YF M K +GL PE++HY+C+VDLL R G L +A +FI +MP+ PN ++W+
Sbjct: 597 GLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGAC 656
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AA+ L + E +AT+V L+N Y + +R LMK++G+K PG
Sbjct: 657 RVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPG 716
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
CSWI + +++F A D+ + +I L+ L ++ +L VP++ E
Sbjct: 717 CSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSYE 765
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%)
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSKC I A ++F++M RN SWT +IA A+ E + M++ + P+ F +
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+ IL C G ++ G H Q + GF S+ V+ +L++MY K +E++ VFN M
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
++VSWN+MI G+ + L + A DLF MM + V PDA TF+GV + V + K
Sbjct: 235 VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ G+ + ++D+ + G L+EAR
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEAR 327
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 156/325 (48%), Gaps = 17/325 (5%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKVDASFLSTAVT-----------SCGS 147
S VF+ + + VV +I+ +DL+ + + + VT + G
Sbjct: 225 SYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGM 284
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE--MPVRNVVSWT 205
R++ A+ G +N VG++LI + SKC + +A +F + R W
Sbjct: 285 LRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWN 344
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
A+I+ + + + LEL+ M + + + +T+ S+ +A L G+ H + I+
Sbjct: 345 AMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKS 404
Query: 266 GF-FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G +Y+ ++N++ + Y KCG++E+ VFN M +D++SW S++ Y+Q +AI++
Sbjct: 405 GLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEI 464
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F M + + P+ TF V+ SC + L+E G+ + K GL + S +VD+ +
Sbjct: 465 FSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAK 524
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G L +A+ ++ + V W A
Sbjct: 525 CGCLGDAKKVFNRIS-NADTVSWTA 548
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 26/308 (8%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G + + IR GF ++ +V ++L+ +Y+K + I D+YKVF M NVVSW A+I F
Sbjct: 190 GNMVHAQIVIR-GFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+L+ M + P+ TF + A + + + + +G S
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL 308
Query: 273 VANSLISMYCKCGNVEEAVYVFNN--MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V +LI M KCG+++EA +FN+ + + WN+MI+GY + G +A++LF +M +
Sbjct: 309 VGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQ 368
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS---CVVDLLGRAGL 387
+ D T+ V ++ + GK K GL E+++ S V + + G
Sbjct: 369 NDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGL--EVNYVSISNAVANAYAKCGS 426
Query: 388 LEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
LE+ R +M E R L+ + L Y+ WD+A + M
Sbjct: 427 LEDVRKVFNRM------------EDRDLI------SWTSLVTAYSQCSEWDKAIEIFSNM 468
Query: 448 KDKGLKTN 455
+ +G+ N
Sbjct: 469 RAEGIAPN 476
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSY--IQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+L C + L Q ++ H ++ F ++ + + N + Y KC +++ A +F+ M
Sbjct: 74 LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
++ SW +IAG A++GL + + F EM Q + PD + G++ C +E G +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + ++++ + +E++ M N V W A
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT-EVNVVSWNA 242
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 227/407 (55%), Gaps = 29/407 (7%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++ ++ CG+ ++ G Q + G N+ V +S + LY + +A + FEEM
Sbjct: 284 LTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMD 343
Query: 198 VRNVVSWTAIIAAFAQEWQVD-----------MCLELYRMMRNSMLEPNDFTFTSILSAC 246
++++W A+I+ +AQ + L+++R ++ S ++P+ FTF+SILS C
Sbjct: 344 DVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVC 403
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ AL QG H QTI+ GF S + V ++L++MY KCG +E+A F M + +V+W
Sbjct: 404 SSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWT 463
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-K 365
SMI+GY+QHG AI LFE+M V+P+ ITF+ V+S+C + GL E+ + YFD M +
Sbjct: 464 SMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEE 523
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----------------- 408
+ ++P +DHY C+VD+ R G L++A FI++ PN IW
Sbjct: 524 YKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFY 583
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AA+ + L P+ T+V L N+Y W ARVRKLMK +GL SWI I + VY
Sbjct: 584 AADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVY 643
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKR 515
F+A DK++ E+ +L+ L+++ KT+GY P E D K+
Sbjct: 644 FFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQSAELSDSEDDKK 690
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 154/334 (46%), Gaps = 20/334 (5%)
Query: 79 DSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFL 138
D++ L Q + + V QLL+ V VE L + + H L
Sbjct: 131 DARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYT--------L 182
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ +C ++ N G+ I+ ++ +G+SL +Y+K + A + F +P
Sbjct: 183 GAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPD 242
Query: 199 RNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+NV++WT +I+A A+ E ++ L L+ M + PN+FT TS++S C L G+
Sbjct: 243 KNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQ 302
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ--- 314
++G + I V NS + +Y + G +EA+ F M I++WN+MI+GYAQ
Sbjct: 303 VQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIME 362
Query: 315 --------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+A+ +F + + +KPD TF ++S C +E+G+ K
Sbjct: 363 TAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKT 422
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
G ++ S +V++ + G +E+A +M I
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSI 456
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 1/272 (0%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
RE V ++ + C T ++ G ++TG A+++V +SL+ Y +C
Sbjct: 71 REGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQ 130
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
DA +F++MP +NVV+WTA+I + Q+ LE++ M + P+ +T ++L+AC+
Sbjct: 131 DARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACS 190
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
S G H TI+ S + NSL MY K G++E A+ F + K++++W +
Sbjct: 191 ASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTT 250
Query: 308 MIAGYAQ-HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
MI+ A+ + LF +M+ V P+ T V+S C + GK K
Sbjct: 251 MISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKI 310
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G + + + + L R G +EA F ++M
Sbjct: 311 GCQTNIPVKNSTMYLYLRKGETDEAMRFFEEM 342
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 125/242 (51%), Gaps = 13/242 (5%)
Query: 105 FDQLLDTPVVDVE------KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQ 158
+ Q+++T D+ + + + +L R +K D S+ ++ C S + G
Sbjct: 357 YAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIH 416
Query: 159 CLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
I+TGF+++V V S+L+ +Y+KC I DA K F EM +R +V+WT++I+ ++Q +
Sbjct: 417 AQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQ 476
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF--SYIQVANS 276
++L+ MR + + PN+ TF +LSAC+ +G L + + ++ + +
Sbjct: 477 EAIQLFEDMRFAGVRPNEITFVCVLSACSYAG-LAEKAEHYFDMMKEEYKIEPIVDHYGC 535
Query: 277 LISMYCKCGNVEEA-VYVFNNMHGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQR 332
++ M+ + G +++A ++ + W+S++AG HG LA A D E+ +
Sbjct: 536 MVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKG 595
Query: 333 VK 334
++
Sbjct: 596 IE 597
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 218/394 (55%), Gaps = 19/394 (4%)
Query: 128 RERLKVDASF-LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI 186
RE V F LS+ + C + G L ++ GF +VYV ++LI +Y+KC +
Sbjct: 340 REGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKM 399
Query: 187 IDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC 246
A K+F E+ +NVVSW +I + + L ++R + + + TF+S L AC
Sbjct: 400 DTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGAC 459
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
++ G H I+ + V+NSLI MY KCG+++ A VFN M D+ SWN
Sbjct: 460 ASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWN 519
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AK 365
++I+GY+ HGL +A+ +F+ M KP+ +TFLGV+S C + GL+++G+ F+SM
Sbjct: 520 ALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICD 579
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------------- 409
HG++P L+HY+C+V L GR+G L++A + I+ +P P+ +IW A
Sbjct: 580 HGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARR 639
Query: 410 -AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AE L + P+ AT+V L+N+YAG + W A +RK MK+KG+K PG SWIE V+
Sbjct: 640 SAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVH 699
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
F + + I +L++L + GYVP+
Sbjct: 700 FFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPD 733
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 131/243 (53%), Gaps = 12/243 (4%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++T + + VG L+ LY++ + DA+KVF EMP +VV W+ +IA F Q + +
Sbjct: 274 LKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAV 333
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+++ MR + PN+FT +SIL+ C G G H +++GF + V+N+LI +Y
Sbjct: 334 DIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVY 393
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KC ++ AV +F + K++VSWN++I GY G +A+++F E ++ +V +TF
Sbjct: 394 AKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFS 453
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY------SCVVDLLGRAGLLEEARDFI 395
+ +C +E G + HGL + ++ + ++D+ + G ++ A+
Sbjct: 454 SALGACASLASMELG------VQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVF 507
Query: 396 KQM 398
+M
Sbjct: 508 NEM 510
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ G+ +N +VG++LI YS C + A VFE + +++V W I++ + + + L
Sbjct: 173 VKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSL 232
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L M PN++TF + L A G GA +S H Q ++ + +V L+ +Y
Sbjct: 233 QLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLY 292
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+ G++ +A VFN M D+V W+ MIA + Q+G +A+D+F M + V P+ T
Sbjct: 293 TQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLS 352
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
+++ C G G+ + K G ++ + ++D+ + ++ A ++
Sbjct: 353 SILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELS-S 411
Query: 402 PNAVIW 407
N V W
Sbjct: 412 KNVVSW 417
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 2/226 (0%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K ++M + R ++ V S+A+ +C S ++ G LAI+T V V +SLI
Sbjct: 432 KALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLI 491
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
+Y+KC I A VF EM +V SW A+I+ ++ L ++ +M+ S +PN
Sbjct: 492 DMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGL 551
Query: 238 TFTSILSACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF +LS C+ +G + QG+ I G ++ ++ ++ + G +++A+ +
Sbjct: 552 TFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEG 611
Query: 297 M-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+ + ++ W +M++ A EE++K K +A L
Sbjct: 612 IPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVL 657
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 4/208 (1%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D+ T + C + C ++ G +++ + L+ Y K DA +
Sbjct: 47 LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+EMP RN VS+ + +A + V LY + E N FTS L
Sbjct: 107 FDEMPERNNVSYVTLTQGYACQDPVG----LYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
H +++G+ S V +LI+ Y CG+V+ A VF + KDIV W +++ Y
Sbjct: 163 EICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCY 222
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITF 340
++G ++ L M P+ TF
Sbjct: 223 VENGCFEDSLQLLSRMGMDGFMPNNYTF 250
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 224/405 (55%), Gaps = 18/405 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D +K + + +H ++ + +C G ++ GF + +YV +
Sbjct: 290 DSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMT 349
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC I+DA K F+ + ++V WT++I + Q + + L LY M + P
Sbjct: 350 ALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILP 409
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N+ T S+L AC+ AL QG+ H +T++ GF + + ++L +MY KCG +++ VF
Sbjct: 410 NELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVF 469
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +D++SWN+MI+G +Q+G A++LFEEM + KPD +TF+ ++S+C H GLVE
Sbjct: 470 RRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVE 529
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
G YF M + G+ P ++HY+C+VD+L RAG L+EA +F + I +W
Sbjct: 530 RGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGA 589
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A E + L + ++ +V L+++Y+ + W+ RVR++MK +G+ P
Sbjct: 590 CRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEP 649
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
GCSWIE+ + V+ F +D+ + ++ +I L L QMK GY P
Sbjct: 650 GCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEP 694
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 160/292 (54%), Gaps = 7/292 (2%)
Query: 119 LISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
++ + + E +A + T+ + + GG +AI+ +V+VGSSL+
Sbjct: 92 VMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMN 151
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+Y K + +A KVF+ MP RN VSW +I+ +A + L L+R+MR N+F
Sbjct: 152 MYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFV 211
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
FTS+LSA T + G+ HC ++ G S + V N+L++MY KCG++++A+ F
Sbjct: 212 FTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSS 271
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
K+ ++W++MI GYAQ G + +A+ LF M ++P TF+GVI++C G EGK
Sbjct: 272 DKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQ 331
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYPNAVIW 407
D + K G + ++ + +VD+ + + +AR D++++ P+ V+W
Sbjct: 332 VHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQE----PDIVLW 379
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 155/290 (53%), Gaps = 2/290 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRN-IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
L R + + F+ T+V S + + G C+A++ G ++ V VG++L+T+Y+KC
Sbjct: 199 LMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCG 258
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA + FE +N ++W+A+I +AQ D L+L+ M S + P++FTF +++
Sbjct: 259 SLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVIN 318
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC+ GA +G+ H +++GF S I V +L+ MY KC ++ +A F+ + DIV
Sbjct: 319 ACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVL 378
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W SMI GY Q+G A+ L+ M + + P+ +T V+ +C +E+GK
Sbjct: 379 WTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTV 438
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
K+G E+ S + + + G L++ ++MP + + W A S L
Sbjct: 439 KYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPA-RDVISWNAMISGL 487
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 123/242 (50%), Gaps = 3/242 (1%)
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ--VDMCLELYRMM 227
VY+ +SL+ LY+KC+ + +A VFE + ++VVSW II ++Q +EL++ M
Sbjct: 40 VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRM 99
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
R PN TF + +A + GR AH I+M + V +SL++MYCK G
Sbjct: 100 RAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLT 159
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
EA VF+ M ++ VSW +MI+GYA LA A+ LF M ++ + F V+S+
Sbjct: 160 PEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSAL 219
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
LV GK K+GL + + +V + + G L++A + N++ W
Sbjct: 220 TLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTF-ETSSDKNSITW 278
Query: 408 EA 409
A
Sbjct: 279 SA 280
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
M P++ +F + L T + +L +G++ H Q I+ S + +ANSL+++Y KC + EA
Sbjct: 1 MTLPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREA 59
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGL--AVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+VF + KD+VSWN +I GY+QHG + ++LF+ M + P+A TF GV ++
Sbjct: 60 KFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAS 119
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDH------YSCVVDLLGRAGLLEEARDFIKQMPIYP 402
G++ H + ++D S ++++ +AGL EAR MP
Sbjct: 120 TLVDAAGGRL------AHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMP-ER 172
Query: 403 NAVIW 407
N+V W
Sbjct: 173 NSVSW 177
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 231/418 (55%), Gaps = 53/418 (12%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+A S+ + SC ++ G C AI+ G +++YV + L+ +Y++ ++ A ++F
Sbjct: 144 NAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLF 199
Query: 194 EEMPVRNVVS-------------------------------WTAIIAAFAQEWQVDMCLE 222
++MP R++VS W +I +AQ + L+
Sbjct: 200 DKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLK 259
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
L+R M + PN+ T ++LSAC GAL GR H G + V +LI MY
Sbjct: 260 LFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYS 319
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG++E+A VF+ + KD+V+WNSMI GYA HG + A+ LFEEM + KP ITF+G
Sbjct: 320 KCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIG 379
Query: 343 VISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
++S+C HGGLVEEG+ +F M K+G++P+++HY C+V+LLGRAG LEEA +K M I
Sbjct: 380 ILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIA 439
Query: 402 PNAVIW-------------EAAE--SRLLLEPECA--ATHVQLANLYAGVRCWDQAARVR 444
+ V+W + E ++ L++ + A T+V L+N+YA W+ A++R
Sbjct: 440 ADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMR 499
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
LMK+ G++ GCS IE+ N V+ F A ++ + + EI +L+ + +K GY P+
Sbjct: 500 TLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQ 557
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 35/232 (15%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF NV S++AII + Q D Y M + +EPN FTF+S+L +C+
Sbjct: 101 VFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS---- 156
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV------------------------ 287
L G+ HCQ I++G S + V L+ +Y + G+V
Sbjct: 157 LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTC 216
Query: 288 -------EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
++A +F M +D+V WN MI GYAQ G+ ++ LF M+ + P+ +T
Sbjct: 217 YSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTV 276
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
L V+S+C G +E G+ + G++ + + ++D+ + G LE+AR
Sbjct: 277 LAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDAR 328
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H +R G + + L Y G ++ +V+VFN ++ S++++I + Q L
Sbjct: 67 HASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLF 126
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
RA + +M+ V+P+A TF V+ SC +E GKV K GL +L + +
Sbjct: 127 DRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGL 182
Query: 379 VDLLGRAGLLEEARDFIKQMP 399
VD+ R G + AR +MP
Sbjct: 183 VDVYARGGDVVCARQLFDKMP 203
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 228/405 (56%), Gaps = 25/405 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + V++C + G + ++ G V +SLI +Y K + A ++FEEMP
Sbjct: 167 LLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 226
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
VR++VSW +++ + ++L+ +M+ + + P+ T ++L ACT +G Q S
Sbjct: 227 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 286
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H R GF + I +A +L+++Y K G + + +F + +D ++W +M+AGYA H
Sbjct: 287 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 346
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
AI LF+ M+K+ V+ D +TF ++S+C H GLVEEGK YF+ M++ + ++P LDHYS
Sbjct: 347 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYS 406
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C+VDLLGR+G LE+A + IK MP+ P++ +W E AE L L+P
Sbjct: 407 CMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPS 466
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
++ L+N+Y+ W A++VR LMK++ L NPGCS+IE N ++RF D+ + R
Sbjct: 467 DHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPR 526
Query: 480 LSEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRTE 517
EI L+ L+ +++ G P ++ EE D +K +E
Sbjct: 527 SDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSE 571
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 220/387 (56%), Gaps = 22/387 (5%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+C + ++ G L + +NV V +SLI++YSKC+ + A +F + NV +
Sbjct: 356 ACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-T 414
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W A+I +AQ V L L+ MM++ ++ + FT +++A Q + H +
Sbjct: 415 WNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAV 474
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
R + + V+ +L+ MY KCG ++ A +F+ M + +++WN+MI GY HG+ +D
Sbjct: 475 RACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLD 534
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLL 382
LF EM K VKP+ ITFL VIS+C H G VEEG + F SM + + L+P +DHYS +VDLL
Sbjct: 535 LFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLL 594
Query: 383 GRAGLLEEARDFIKQMPIYP----------------NAVIWEAAESRLL-LEPECAATHV 425
GRAG L++A +FI++MPI P N + E A +L L+P+ HV
Sbjct: 595 GRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHV 654
Query: 426 QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILP 485
LAN+YA WD+ A+VR M+DKGL PGCSW+E+ N ++ F + ++ +I
Sbjct: 655 LLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYA 714
Query: 486 VLDFLVDQMKTLGYVPE---VHEEKVD 509
L+ L D++K GYVP+ +H+ + D
Sbjct: 715 FLETLGDEIKAAGYVPDPDSIHDVEED 741
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 123/212 (58%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
CG +++ G L I GF +N++V +++++LY+KCR I +AYK+FE M +++VSW
Sbjct: 155 CGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSW 214
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
T ++A +AQ L+L M+ + +P+ T SIL A AL GRS H R
Sbjct: 215 TTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFR 274
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
GF S + V N+L+ MY KCG+ A VF M K +VSWN+MI G AQ+G + A
Sbjct: 275 SGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFAT 334
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
F +M+ + P +T +GV+ +C + G +E G
Sbjct: 335 FLKMLDEGEVPTRVTMMGVLLACANLGDLERG 366
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
K D+ L + + + + +R G A R+GF + V V ++L+ +Y KC A
Sbjct: 243 KPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARL 302
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+ M + VVSW +I AQ + + + M + P T +L AC G
Sbjct: 303 VFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGD 362
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L +G H ++ S + V NSLISMY KC V+ A +FNN+ K V+WN+MI G
Sbjct: 363 LERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTNVTWNAMILG 421
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
YAQ+G A++LF M Q +K D T +GVI++ + + K + +
Sbjct: 422 YAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNN 481
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + +VD+ + G ++ AR M + + W A
Sbjct: 482 VFVSTALVDMYAKCGAIKTARKLFDMMQ-ERHVITWNA 518
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 125/259 (48%), Gaps = 7/259 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C S + + P+ I+ GF + +I+L+ K +A +VFE + ++
Sbjct: 54 LENCTSKKELYQILPF---IIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLD 110
Query: 202 VSWTAIIAAFAQEWQVD--MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
V + ++ +A+ + +C L M L D+ +L C + L +GR H
Sbjct: 111 VLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYA--CLLQLCGENLDLKKGREIH 168
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
I GF S + V +++S+Y KC ++ A +F M KD+VSW +++AGYAQ+G A
Sbjct: 169 GLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAK 228
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
RA+ L +M + KPD++T + ++ + + G+ + G + ++ + ++
Sbjct: 229 RALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALL 288
Query: 380 DLLGRAGLLEEARDFIKQM 398
D+ + G AR K M
Sbjct: 289 DMYFKCGSARIARLVFKGM 307
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 76/140 (54%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V++ +++ + + +K+D L +T+ R LA+R NV+V ++
Sbjct: 428 VKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTA 487
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
L+ +Y+KC I A K+F+ M R+V++W A+I + L+L+ M+ ++PN
Sbjct: 488 LVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPN 547
Query: 236 DFTFTSILSACTGSGALGQG 255
D TF S++SAC+ SG + +G
Sbjct: 548 DITFLSVISACSHSGFVEEG 567
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 220/380 (57%), Gaps = 19/380 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D+ +T + C +N+ G ++ G++ +V VG++LI LY+KCR + A VF
Sbjct: 380 DSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVF 439
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ +N+VS+ AI++ + + D + L+ +R + ++P+ TF +LS L
Sbjct: 440 HSLLDKNIVSFNAILSGYIGADEED-AMALFSQLRLADIKPDSVTFARLLSLSADQACLV 498
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
+G+ H I+ GF + V N++I+MY KCG++ +A +F +M+ D +SWN++I+ YA
Sbjct: 499 KGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYA 558
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPEL 372
HG +A+ LFEEM K+ PD IT L V+ +C + GL+EEG F+ M +K+G+KPE+
Sbjct: 559 LHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEI 618
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLL 415
+H++C+VDLLGRAG L EA FI + P + ++W A++ L
Sbjct: 619 EHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLD 678
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L PE A +++ ++NLYAG ++AARVR +M D + G SWIEI N V++F A DK
Sbjct: 679 LAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFVASDK 738
Query: 476 SNTRLSEILPVLDFLVDQMK 495
+ EI LD L +MK
Sbjct: 739 DHPESKEIYAKLDLLKSEMK 758
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 2/266 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
S GS + G A + LA + G+ + + G++L+ LY K + DA VF+EM VRN ++
Sbjct: 88 SIGSGDLMLGQAIHAFLA-KLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTIT 146
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT +I Q V+ + R M E N+ T + IL AC L +G H I
Sbjct: 147 WTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVI 206
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ GF + V SLISMY +CG++ A V++N+ KD+ N MI+ Y + G +AI
Sbjct: 207 KRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIG 266
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
+F ++ ++P+ TF VIS+C VE +V K G E+ + +V +
Sbjct: 267 VFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYV 326
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G+LEEA M N V W A
Sbjct: 327 KHGMLEEAEKSFCGMG-ERNLVSWTA 351
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 144/280 (51%)
Query: 113 VVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
V DVE + + +++ + + S + +C S N+ G I+ GF +V+V
Sbjct: 157 VNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFV 216
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
G+SLI++YS+C + A KV+ + ++V +I+ + + + + ++ + S L
Sbjct: 217 GTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGL 276
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
EPND+TFT+++SAC G + R H I+ G I V N+++S+Y K G +EEA
Sbjct: 277 EPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEK 336
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
F M +++VSW ++++GY ++G +A++ F ++++ V D+ F ++ C
Sbjct: 337 SFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKN 396
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ G + K G ++ + ++DL + L AR
Sbjct: 397 LGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSAR 436
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK I + L L+ + + +++C ++ + I+ G + VG+++
Sbjct: 262 EKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAI 321
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+++Y K ++ +A K F M RN+VSWTA+++ + + LE + + + +
Sbjct: 322 VSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDS 381
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F ++L C+ LG G H +++G+ + V +LI +Y KC + A VF++
Sbjct: 382 CCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHS 441
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ K+IVS+N++++GY A+ LF ++ +KPD++TF ++S + +G
Sbjct: 442 LLDKNIVSFNAILSGYIGAD-EEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKG 500
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
K + K G + + V+ + + G + +A M Y +++ W A S L
Sbjct: 501 KCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMN-YLDSISWNAVISAYAL 559
Query: 417 EPE 419
+
Sbjct: 560 HGQ 562
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 104 VFDQLLDTPVV------------DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNI 151
VF LLD +V D E +++ L +K D+ + ++ +
Sbjct: 438 VFHSLLDKNIVSFNAILSGYIGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACL 497
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
G I+TGF AN VG+++IT+Y+KC I DA ++F M + +SW A+I+A+
Sbjct: 498 VKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAY 557
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
A Q L L+ M+ P++ T S+L AC+ SG L +G
Sbjct: 558 ALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEG 601
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+L GSG L G++ H ++G+ + N+L+++Y K + +A VF+ M ++
Sbjct: 84 LLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRN 143
Query: 302 IVSWNSMIAGYAQ 314
++W ++I G+ Q
Sbjct: 144 TITWTTLIKGHLQ 156
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 222/417 (53%), Gaps = 49/417 (11%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D LST +++CG N+ G + + + ++ S+L+T+Y+ C + A +F
Sbjct: 222 DEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLF 281
Query: 194 EEMPVRNVVS-------------------------------WTAIIAAFAQEWQVDMCLE 222
E+M +N+V+ W+A+I+ +A+ L
Sbjct: 282 EKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALN 341
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
L+ M++ ++P+ T S+++AC GAL Q + H + GF + + N+LI MY
Sbjct: 342 LFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYA 401
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG++E A +F+ M K+++SW MI+ +A HG A A+ F +M + ++P+ ITF+G
Sbjct: 402 KCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVG 461
Query: 343 VISSCRHGGLVEEG-KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V+ +C H GLVEEG K+++ + +H + P+ HY C+VDL GRA LL EA + ++ MP+
Sbjct: 462 VLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLA 521
Query: 402 PNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVR 444
PN +IW E A RLL L+P+ HV L+N+YA R W+ +VR
Sbjct: 522 PNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVR 581
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
KLMK KG+ GCS E+ N ++ F D+S+ EI L +V ++K +GY P
Sbjct: 582 KLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSP 638
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 156/322 (48%), Gaps = 32/322 (9%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + ++ + + L VD + + +++ G LA + GF ++ +V + L
Sbjct: 104 EKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGL 163
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+ C I +A +F++M R+VV+W+ +I + Q + L L+ M+N +EP++
Sbjct: 164 VRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDE 223
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN---------- 286
+++LSAC +G L G+ H + + ++L++MY CG+
Sbjct: 224 MMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEK 283
Query: 287 ---------------------VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
+E A VFN M KD+V W++MI+GYA+ A++LF
Sbjct: 284 MTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLF 343
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
EM +KPD +T L VI++C H G +++ K + K+G L + ++++ +
Sbjct: 344 NEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKC 403
Query: 386 GLLEEARDFIKQMPIYPNAVIW 407
G LE AR +MP N + W
Sbjct: 404 GSLERARRIFDKMP-RKNVISW 424
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF +P + ++ + + L +Y MR L + F+F +L A +
Sbjct: 75 ALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSR 134
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+L +G H ++GF S V L+ MY CG + EA +F+ M +D+V+W+ M
Sbjct: 135 VKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIM 194
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I GY Q GL A+ LFEEM V+PD + V+S+C G + GK+ D + ++ +
Sbjct: 195 IDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNI 254
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ S +V + G ++ A + ++M
Sbjct: 255 VVDPHLQSALVTMYASCGSMDLALNLFEKM 284
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 231/421 (54%), Gaps = 37/421 (8%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGS 147
S +F Q+ + +V + LI+ + + ++ LK + S+ ++ C
Sbjct: 581 SRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSG 640
Query: 148 TRNIRGGAPYQCLAIRTGFIAN-VYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWT 205
+ N G C +++G + + +G SL +Y K +++ DA K+ EMP +N+ WT
Sbjct: 641 SLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWT 700
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
AII+ +AQ D L + MR+ + ++ TF S+L AC+ A G+ H +
Sbjct: 701 AIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKS 760
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDL 324
GF SY ++LI MY KCG+V + F + K DI+ WNSMI G+A++G A A+ L
Sbjct: 761 GFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLL 820
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLG 383
F++M + ++KPD +TFLGV+ +C H GL+ EG+ +F M K +GL P LDHY+C +DLLG
Sbjct: 821 FQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLG 880
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQ 426
R G L+EA++ I Q+P P+ V+W AA + LEP+ ++T+V
Sbjct: 881 RGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVL 940
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK---SNTRLSEI 483
L++L+A W +A R+ M++KG+ PGCSWI + N F +DK N R+ E+
Sbjct: 941 LSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEM 1000
Query: 484 L 484
L
Sbjct: 1001 L 1001
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 147/293 (50%), Gaps = 4/293 (1%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
++ ++ D+ L S ++ +++ + + G A+ G ANV+VGSSLI
Sbjct: 308 NVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLI 367
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
LY+KC DA VF+ +N+V W A++ F Q + + +++ M L+ ++F
Sbjct: 368 NLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF SIL ACT + G+ HC TI+ + VAN+ + MY K G + +A +F+ +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
KD +SWN++ G AQ+ A+ + + M + PD ++F I++C + E GK
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM---PIYP-NAVI 406
K+G+ S ++DL + G +E +R Q+ I P NA+I
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALI 600
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 5/296 (1%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I M + R L+ D + + +C + G C+ I+ +++V ++
Sbjct: 408 EEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT 467
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +YSK I DA +F +P ++ +SW A+ AQ + + + + + MR + P+D
Sbjct: 468 LDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDD 527
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+F++ ++AC+ A G+ HC I+ G S V +SLI +Y K G+VE + +F
Sbjct: 528 VSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQ 587
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ IV N++IAG+ Q+ AI LF++++K +KP ++TF ++S C G
Sbjct: 588 VDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIG 647
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLG---RAGLLEEARDFIKQMPIYPNAVIWEA 409
K K G+ D V L G ++ +LE+A + +MP + N W A
Sbjct: 648 KQVHCYTLKSGVL--YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTA 701
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 3/278 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D SF STA+ +C + R G CLAI+ G +N VGSSLI LYSK + + K+F
Sbjct: 527 DVSF-STAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 585
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
++ ++V A+IA F Q D ++L++ + L+P+ TF+SILS C+GS
Sbjct: 586 AQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSA 645
Query: 254 QGRSAHCQTIRMG-FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAG 311
G+ HC T++ G + + SL +Y K +E+A + M K++ W ++I+G
Sbjct: 646 IGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
YAQ+G ++ F M V+ D TF V+ +C +GK + K G
Sbjct: 706 YAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSY 765
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S ++D+ + G + + + K++ + + W +
Sbjct: 766 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 803
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A + ++MP + V+W A+I+ AQ L LY+ MR+ L P TF S+LSA
Sbjct: 278 ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAAN 337
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A +G+ H + G + + V +SLI++Y KCG +A VF+ K+IV WN+M
Sbjct: 338 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAM 397
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ G+ Q+ L AI +F+ MM+ ++ D TF+ ++ +C + GK K+ +
Sbjct: 398 LTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 457
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L + +D+ + G + +A+ +P Y +++ W A
Sbjct: 458 DISLFVANATLDMYSKYGAIGDAKALFSLIP-YKDSISWNA 497
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 122/290 (42%), Gaps = 52/290 (17%)
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
R +RGG+P L R +G SL+ LY K + A+ R + ++++
Sbjct: 81 RILRGGSP---LLGR--------LGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 209 AAFAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
+ A+ L +R +R + P+ F +LSAC+ G L GR HC ++ GF
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGF 189
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
S + +L+ MY KCG+V A VF+ + D + W+SMIA Y + G A+ LF
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 249
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M K PD +T + +IS+ L +G
Sbjct: 250 MDKMGSAPDQVTLVTIIST-----------------------------------LASSGR 274
Query: 388 LEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCW 437
L+ A +K+MP P+ V W A ++ + + LY +R W
Sbjct: 275 LDHATALLKKMPT-PSTVAWNA----VISGHAQSGLEFNVLGLYKDMRSW 319
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ +++C + G C +++GF ++V+ ++L+ +Y+KC + +A +VF+ +
Sbjct: 161 LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIA 220
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ + W+++IA + + L L+ M P+ T +I+S SG L
Sbjct: 221 CPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRL----- 275
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+ A + M V+WN++I+G+AQ GL
Sbjct: 276 ------------------------------DHATALLKKMPTPSTVAWNAVISGHAQSGL 305
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ L+++M + P TF ++S+ + EG+ + HGL + S
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 365
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+++L + G +A++ + + N V+W A
Sbjct: 366 LINLYAKCGCPSDAKN-VFDLSCEKNIVMWNA 396
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R+ H + +R G ++ +SL+ +YCK G V A + + +S+++ +A+
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 316 GLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
G + F + +PD V+S+C G++ G+ + K G +
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD+ + G + AR + P+ + W +
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIAC-PDTICWSS 229
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 239/458 (52%), Gaps = 79/458 (17%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D L + +C S G +A+R+G +++VG++L+ +Y+KC ++ +A
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68
Query: 191 KVFEEMPVR-----------------------------------NVVSWTAIIAAFAQ-- 213
KVF+ + + NVVSW+A+IAAFAQ
Sbjct: 69 KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 214 -------------EWQVDMCLELYRMM--RNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+ + LEL+ M ++ +++PN FT + L AC AL GR
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188
Query: 259 HCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R F S ++ VAN LI MY K G+++ A +VF+N+ K+ VSW S++ GY HG
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGR 248
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYS 376
A+++F+EM + ++PD +T L V+ +C H G++++G +F+SM+K G+ P +HY+
Sbjct: 249 GKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYA 308
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C+VDLLGRAG L EA + I+ M + P++++W AA+ L L E
Sbjct: 309 CMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSE 368
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
++ L+N+YA R W ARVR LMK+ G++ PGCSW++ F DK++ +
Sbjct: 369 NDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQ 428
Query: 480 LSEILPVLDFLVDQMKTLGYVPEV--------HEEKVD 509
+I +L L ++K LGYVPE EEKVD
Sbjct: 429 SKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVD 466
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 214/358 (59%), Gaps = 19/358 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+ ++LI Y++ R + A +F +MP R+++SWT +I ++Q + L ++ M
Sbjct: 176 NLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMA 235
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ P++ T +++SAC GAL G+ H ++ GF + + ++LI MY KCG+++
Sbjct: 236 KHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLD 295
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
++ +F + K++ WNS+I G A HG A A+ +F++M ++++KP+ +TF+ V+S+C
Sbjct: 296 RSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACN 355
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GL+EEG+ F SM + H + P ++HY C+VDLL +AGLLEEA I+ M + PNAVIW
Sbjct: 356 HAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIW 415
Query: 408 E-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AA ++LEP + + L N+ A V W +AA++R MK++
Sbjct: 416 GALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQ 475
Query: 451 GL-KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEK 507
G+ K PG SWIE+ + V++F A DKS+ EI +L L QMK GYVPE+ E +
Sbjct: 476 GVEKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAELDGQMKLAGYVPELCEAE 533
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 43/271 (15%)
Query: 125 DLHRERLKVDASFLS----TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
+L+ + L+ + S S + + +CG +R R GF ++V+V +SL+ Y
Sbjct: 66 ELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFY 125
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
S I ++ +VF+EMP R+V +WT +++ + + L+ MM + L
Sbjct: 126 SSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNL-------- 177
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
N+LI Y + V+ A +FN M +
Sbjct: 178 -------------------------------ATWNTLIDGYARLREVDVAELLFNQMPAR 206
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
DI+SW +MI Y+Q+ A+ +F EM K + PD +T VIS+C H G ++ GK
Sbjct: 207 DIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIH 266
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ +HG ++ S ++D+ + G L+ +
Sbjct: 267 YYIMQHGFNLDVYIGSALIDMYAKCGSLDRS 297
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++T + Y+ + I+ S + A + +M + NV + A+I F Q +Q L
Sbjct: 6 VKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQAL 65
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
ELY M + + P +TF S++ AC L + H R GF S++ V SL+ Y
Sbjct: 66 ELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFY 125
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG----------------LA------- 318
G +EE+V VF+ M +D+ +W +M++G + G LA
Sbjct: 126 SSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLID 185
Query: 319 ----VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+R +D+ E + Q D I++ +I+ E F+ MAKHG+ P+
Sbjct: 186 GYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVT 245
Query: 375 YSCVVDLLGRAGLLEEARD 393
+ V+ G L+ ++
Sbjct: 246 MATVISACAHLGALDLGKE 264
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + +++ + + D ++T +++C + G ++ GF +VY+GS+LI +
Sbjct: 228 LGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDM 287
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + + +F ++ +N+ W ++I A + L ++ M ++PN TF
Sbjct: 288 YAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTF 347
Query: 240 TSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
S+LSAC +G + +GR R ++ ++ + K G +EEA+ + M
Sbjct: 348 VSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMK 407
Query: 299 -GKDIVSWNSMIAGYAQH 315
+ V W ++++G H
Sbjct: 408 LEPNAVIWGALLSGCKLH 425
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 36/222 (16%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N IS ++ AV + M ++ +N+MI G+ Q V+A++L+ +M++ V
Sbjct: 18 NQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVS 77
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY----SCVVDLLGRAGLLEE 390
P + TF +I +C GLV + + + +++ H + D + + +VD G +EE
Sbjct: 78 PTSYTFPSLIKAC---GLVSQLR-FAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEE 133
Query: 391 ARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWD--QAARVRKLMK 448
+ +MP E + A ++ L VR D A R+ +M
Sbjct: 134 SVRVFDEMP-----------------ERDVFAWTTMVSGL---VRVGDMSSAGRLFDMMP 173
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
D+ L T W +++ R R D + ++ +P D +
Sbjct: 174 DRNLAT-----WNTLIDGYARLREVDVAELLFNQ-MPARDII 209
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/345 (38%), Positives = 205/345 (59%), Gaps = 24/345 (6%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S++T Y+K + DA VF +M +NV++W +IAA+AQ + + + L+ ++ +
Sbjct: 323 TSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIW 382
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF-FSY-----IQVANSLISMYCKCGNV 287
P +T+ ++L+AC L G+ AH ++ GF F + + V NSL+ MY K G++
Sbjct: 383 PTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSI 442
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
++ VF M +D VSWN+MI GYAQ+G A A+ LFE M+ PD++T +GV+S+C
Sbjct: 443 DDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSAC 502
Query: 348 RHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
H GLV+EG+ YF SM + HG+ P DHY+C+VDLLGRAG L+EA + I MP+ P++V+
Sbjct: 503 GHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVL 562
Query: 407 W----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
W E RL L+P+ + +V L+N+YA + W + RVR+ MKD
Sbjct: 563 WASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKD 622
Query: 450 KGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
+G+ PGCSWIEI + F A DK + +EI L + +M
Sbjct: 623 RGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTLRIIQMEM 667
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 158/322 (49%), Gaps = 39/322 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H + ++A ++A+++C + ++ R G L R+ +V++ S+L+ +Y+KC
Sbjct: 142 MHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCER 201
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
DA +VF+ MP RNVVSW ++I + Q V L L+ M + P++ T +S++SA
Sbjct: 202 PEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSA 261
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQV-ANSLISMYCKCG------------------- 285
C G A +GR H ++ V N+L+ MY KCG
Sbjct: 262 CAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVS 321
Query: 286 ------------NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
NVE+A VF+ M K++++WN +IA YAQ+G AI LF ++ + +
Sbjct: 322 ETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK----PELDHY--SCVVDLLGRAGL 387
P T+ V+++C + ++ G+ + K G + PE D + + +VD+ + G
Sbjct: 382 WPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGS 441
Query: 388 LEEARDFIKQMPIYPNAVIWEA 409
+++ ++M N V W A
Sbjct: 442 IDDGAKVFERMAARDN-VSWNA 462
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 34/287 (11%)
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
S N+ G +++ ++ ++L++ Y++ + DA +VF+E+P+RN S+ A
Sbjct: 29 SAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNA 88
Query: 207 IIAAFAQEWQVDMCLELYRMMRN----------------------------SMLEPNDF- 237
+++A+A+ + D L+ + + + + +DF
Sbjct: 89 LLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFV 148
Query: 238 ----TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+F S LSAC G H R + + ++L+ MY KC E+A V
Sbjct: 149 LNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRV 208
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M +++VSWNS+I Y Q+G A+ LF EMM PD +T V+S+C
Sbjct: 209 FDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAAD 268
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
EG+ M K L+ ++ + +VD+ + G EAR MP
Sbjct: 269 REGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP 315
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 8/207 (3%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI------ANV 170
E+ I + L R+ + + +CG+ +++ G ++ GF ++V
Sbjct: 367 EEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDV 426
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
+VG+SL+ +Y K I D KVFE M R+ VSW A+I +AQ + L L+ M S
Sbjct: 427 FVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCS 486
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
P+ T +LSAC SG + +GR H T G ++ + + G+++E
Sbjct: 487 NENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKE 546
Query: 290 AVYVFNNMHGK-DIVSWNSMIAGYAQH 315
A + N+M + D V W S++ H
Sbjct: 547 AEELINDMPMEPDSVLWASLLGACRLH 573
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 230/420 (54%), Gaps = 19/420 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK I + + ++ +K D ++ +++C + ++ G LAI+ I+ V V ++L
Sbjct: 380 EKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKC+ I A +F +P +NV+SWT+IIA + L +R M+ + L+PN
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNA 498
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T T+ L+AC GAL G+ H +R G + N+L+ MY +CG + A FN+
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS 558
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
KD+ SWN ++ GY++ G ++LF+ M+K RV+PD ITF+ ++ C +V +G
Sbjct: 559 -QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQG 617
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA------- 409
+YF M ++G+ P L HY+CVVDLLGRAG L+EA FI++MP+ P+ +W A
Sbjct: 618 LMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 410 ----------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
A+ L+ ++ L NLYA W + A+VR++MK+ GL + GCS
Sbjct: 678 HHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEPF 519
W+E+ V+ F ++DK + + EI VLD ++M +G +D+ R E F
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIF 797
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 151/308 (49%), Gaps = 9/308 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + H L +K D + +CG ++ G +R G+ ++ V ++L
Sbjct: 178 EAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNAL 237
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
IT+Y KC + A +F+ MP R+++SW A+I+ + + L+L+ MR ++P+
Sbjct: 238 ITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDL 297
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T TS++SAC G GR H I GF I V NSL MY G+ EA +F+
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSR 357
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M KDIVSW +MI+GY + L +AID + M + VKPD IT V+S+C G ++ G
Sbjct: 358 MDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 357 KVYFDSMAKHGLKPELDHYSCV----VDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+ K +K L Y V +++ + +++A D +P N + W + +
Sbjct: 418 V----ELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIA 472
Query: 413 RLLLEPEC 420
L L C
Sbjct: 473 GLRLNNRC 480
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 144/284 (50%), Gaps = 1/284 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E+ + + + + R+ VD V C R G+ +A+ + +V +G++
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNA 134
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEP 234
+ ++ + ++DA+ VF +M RN+ SW ++ +A++ D + LY RM+ ++P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKP 194
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ +TF +L C G L +GR H +R G+ I V N+LI+MY KCG+V+ A +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M +DI+SWN+MI+GY ++G+ + LF M V PD +T VIS+C G
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G+ + G ++ + + + AG EA +M
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRM 358
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 112/203 (55%), Gaps = 1/203 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L++ +++C + R G I TGF ++ V +SL +Y +A K+F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLF 355
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
M +++VSWT +I+ + + + ++ YRMM ++P++ T ++LSAC G L
Sbjct: 356 SRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G H I+ SY+ VAN+LI+MY KC +++A+ +F+N+ K+++SW S+IAG
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 314 QHGLAVRAIDLFEEMMKQRVKPD 336
+ A+ F + MK ++P+
Sbjct: 476 LNNRCFEALIFFRQ-MKMTLQPN 497
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 96/187 (51%), Gaps = 5/187 (2%)
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
+++ ++L M+ + ++ F +++ C A +G + + +++ N
Sbjct: 74 KLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGN 133
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM-KQRVK 334
+ ++M+ + GN+ +A YVF M +++ SWN ++ GYA+ G AI L+ M+ VK
Sbjct: 134 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVK 193
Query: 335 PDAITFLGVISSCRHGGL--VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
PD TF V+ +C GG+ + G+ + ++G + ++D + ++ + + G ++ AR
Sbjct: 194 PDVYTFPCVLRTC--GGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 393 DFIKQMP 399
+MP
Sbjct: 252 LLFDRMP 258
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 237/431 (54%), Gaps = 32/431 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLKVDASFL------------STAVTSCGSTR 149
VFDQ+ + +V +I H++L+ + V L S+ +++C +
Sbjct: 302 VFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMG 361
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+ G + ++ G + YV +SL+ +Y KCR + K+F+ + R+VV+W ++
Sbjct: 362 GLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVM 421
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
F Q + + + +MR + P++ +F+++L + AL QG + H Q I++G+
Sbjct: 422 GFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVK 481
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ + SLI+MY KCG++ +A VF + +++SW +MI+ Y HG A + I+LFE M+
Sbjct: 482 NMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHML 541
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLL 388
+ ++P +TF+ V+S+C H G VEEG +F+SM K H + P +HY+C+VDLLGRAG L
Sbjct: 542 SEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWL 601
Query: 389 EEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLY 431
+EA+ FI+ MP+ P +W EAAE +EP +V LAN+
Sbjct: 602 DEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMC 661
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
++A VR+LM G++ PGCSWI++ N+ + F A D+S++ EI +L+ L
Sbjct: 662 TRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLE 721
Query: 492 DQMKTLGYVPE 502
+K GYV E
Sbjct: 722 KLVKKKGYVAE 732
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 136/258 (52%), Gaps = 7/258 (2%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE-- 194
L+TA+ TR+++ I + + ++ ++LI LY+KC + A +F
Sbjct: 148 LLNTAI----QTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSIT 203
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
+ +V+WT++I + L L+ MR S PN FTF+SILSA + +
Sbjct: 204 HHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLH 263
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+ H + GF + I V +L+ MY KC ++ AV VF+ M +++VSWNSMI G+
Sbjct: 264 GQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFH 323
Query: 315 HGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ L RA+ +F+++++++ V P+ ++ V+S+C + G + G+ + K+GL P
Sbjct: 324 NNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTY 383
Query: 374 HYSCVVDLLGRAGLLEEA 391
+ ++D+ + +E
Sbjct: 384 VMNSLMDMYFKCRFFDEG 401
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 3/170 (1%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN--NMHG 299
+L+ + +L H Q I + S + N+LI++Y KCG + +A+ +F+ + H
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K IV+W S+I + + ++A+ LF +M P+ TF ++S+ +V G+
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ KHG + + +VD+ + + A QMP N V W +
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNS 316
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 223/406 (54%), Gaps = 21/406 (5%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ E +S+ +L K+ +S L + V G I Y ++++ F+++ V +
Sbjct: 302 ETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGY---SLKSNFLSHTSVST 358
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L T+YSK I A K+F+E P +++ SW A+I+ + Q + + L+R M+NS P
Sbjct: 359 ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSP 418
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T T ILSAC GAL G+ H F S I V+ +LI MY KCG++ EA +F
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M K+ V+WN+MI+GY HG A+ +F EM+ + P +TFL V+ +C H GLV+
Sbjct: 479 DFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVK 538
Query: 355 EGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---- 409
EG F+SM ++G +P + HY+CVVD+LGRAG L+ A FI+ MPI P +WE
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGA 598
Query: 410 -------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
+E L+P+ HV L+N+++ R + QAA VR+ K + L P
Sbjct: 599 CRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAP 658
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
G + IEI + F + D+S+ ++ I L+ L +M+ GY PE
Sbjct: 659 GYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPE 704
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
LK ++S + A+++ R+ R G AI G + + +GS+++ +Y K + DA
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDAR 174
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGS 249
KVF+ MP ++ + W +I+ + + ++++R ++ S + T IL A
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
L G H + G +S+ V IS+Y KCG ++ A +F DIV++N+MI
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMI 294
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
GY +G ++ LF+E+M K + T + ++ H L+
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLI 338
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
GF ++ + + L S I A +F + +V + ++ F+ L ++
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVF 106
Query: 225 RMMRNSM-LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
+R S L+PN T+ +SA +G G H Q I G S + + ++++ MY K
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFK 166
Query: 284 CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLG 342
VE+A VF+ M KD + WN+MI+GY ++ + V +I +F +++ + + D T L
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 343 VISS 346
++ +
Sbjct: 227 ILPA 230
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 211/362 (58%), Gaps = 19/362 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+SLI Y K + A ++F++MPVR +VSWT +I + + L+++R M+ +E
Sbjct: 181 NSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIE 240
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P++ + ++L AC GAL G+ H + GF + N+LI MY KCG ++EA +
Sbjct: 241 PDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNL 300
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ + KD++SW++MI G A HG AI LFEEM K RV P+ ITFLGV+ +C H GL
Sbjct: 301 FDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLW 360
Query: 354 EEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
+EG YFD M A + ++PE++HY C++DLLGR+G L +A D I +MPI P++ IW
Sbjct: 361 DEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLS 420
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A + + LEPE + +V LAN+YA W+ + +RKL+++K +K
Sbjct: 421 SCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKT 480
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL-VDQMKTLGYVPEVHEEKVDDASHK 514
PG S IE+ NVV F + D S E+ +L+ L ++Q +T + V E+K + S
Sbjct: 481 PGSSSIEVNNVVQEFVSSDDSKPFSQEVFWILEGLALNQTRTNDLMEPVEEDKHEGISEA 540
Query: 515 RT 516
T
Sbjct: 541 AT 542
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 36/245 (14%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM----RNSMLEPNDFTFTSILS 244
A +F+++ N+ ++ AII +A + ++ M NS+ P+ FTF ++
Sbjct: 61 ATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVF-PDKFTFPFVIK 119
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
+CTG G H + G + N+LI MY K G++ A VF M +D++S
Sbjct: 120 SCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVIS 179
Query: 305 WNSMIAGYAQHG-----------LAVR--------------------AIDLFEEMMKQRV 333
WNS+I GY + G + VR A+D+F EM +
Sbjct: 180 WNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGI 239
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+PD I+ + V+ +C G +E GK K+G + + ++++ + G ++EA +
Sbjct: 240 EPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWN 299
Query: 394 FIKQM 398
Q+
Sbjct: 300 LFDQL 304
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ---RVKPDAITFL 341
G+V A +F + +I ++N++I YA + AI +F +M+ V PD TF
Sbjct: 56 GHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFP 115
Query: 342 GVISSC------RHG----GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
VI SC R G GLV + F + ++ L +D Y+ DL + EE
Sbjct: 116 FVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENAL---IDMYTKFGDLTNACKVFEEM 172
Query: 392 --RDFIK-QMPIYPNAVIWEAAESRLLLEPECAATHVQLANL---YAGVRCWDQAARVRK 445
RD I I+ + + +R L + T V + Y + C+ A V +
Sbjct: 173 SHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFR 232
Query: 446 LMKDKGLKTN--------PGCSWIEIMNV 466
M+ G++ + P C+ + + V
Sbjct: 233 EMQMVGIEPDEISIIAVLPACAQLGALEV 261
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 151/389 (38%), Positives = 211/389 (54%), Gaps = 18/389 (4%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
KVDA S + +C +R GFIA+ +G++L+ +Y+K I A K
Sbjct: 102 KVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEK 161
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+EM R++ SW A+I+ FAQ + L L++ M +PN+ + LSAC G
Sbjct: 162 VFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGD 221
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMIA 310
+G H F QV N +I MY KCG V++A VF +M KDIV+WN+MI
Sbjct: 222 FKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIM 281
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
+A HG +A++LFE+M + V PD +++L V+ +C HGGLVEEG F+SM G+KP
Sbjct: 282 AFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKP 341
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------------EAAE--SRLL 415
+ HY VVDLLGRAG L EA D + MP P+ V+W E AE SR L
Sbjct: 342 NVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKL 401
Query: 416 LE--PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
+E V L+N+YA W RVR+ MK++ +K PG S+IE V+++F
Sbjct: 402 VEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNA 461
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
DKS+ EI LD + ++K GYV E
Sbjct: 462 DKSHESWREIYAKLDEIRFRVKEYGYVAE 490
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%)
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F ++ + W AII F Q Y+ M + + + T + +L AC A
Sbjct: 62 FSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLAR 121
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+ H +R GF + + +L+ +Y K G ++ A VF+ M +DI SWN++I+G+
Sbjct: 122 LESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGF 181
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
AQ A+ LF+ M KP+ I+ LG +S+C G +EG+ +
Sbjct: 182 AQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNA 241
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ V+D+ + G +++A + M + V W
Sbjct: 242 QVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTW 276
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSY-IQVANS-LISMYC-KCGNVEEAVYVF 294
+ S LS CT + +L + H G F I A S L+ +Y GN+ A+ F
Sbjct: 4 SLDSFLSKCT-TLSLPHTKQLHAHLFTTGQFRLPISPARSKLLELYALSLGNLSFAILTF 62
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ + WN++I G+ Q A ++ M+ + K DA+T V+ +C
Sbjct: 63 SQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKAC 115
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/401 (36%), Positives = 229/401 (57%), Gaps = 29/401 (7%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++ ++ CG++ ++ G Q + G N+ V +S + LY + +A ++FEEM
Sbjct: 284 LTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEME 343
Query: 198 VRNVVSWTAIIAAFAQ---EWQVDM--------CLELYRMMRNSMLEPNDFTFTSILSAC 246
+V++W A+I+ FAQ + D+ L+++R + S ++P+ FTF+SILS C
Sbjct: 344 DNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVC 403
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ AL QG H QTI+ GF S + V ++L++MY KCG +E A F M + +V+W
Sbjct: 404 STMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWT 463
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-K 365
SMI+GY+QHG AI LFE+M+ KP+ ITF+ ++S+C + GLVEE YFD M +
Sbjct: 464 SMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNE 523
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----------------- 408
+ ++P +DHY C++D+ R G L++A FIK+ PN IW
Sbjct: 524 YHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFY 583
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AA+ L L+P+ T+V L N+Y W ARVRKL K + L SWI I + VY
Sbjct: 584 AADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVY 643
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
F+A+D+S+ + +E+ +L+ L+++ K +GY P + E D
Sbjct: 644 FFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQNTELYD 684
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 11/323 (3%)
Query: 92 FTGTNSTFGSSNVFDQ-LLDTPV--VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGST 148
F NS GS+ V + L+ P +D ++ ++M +E V ++ + C T
Sbjct: 36 FDKGNSYQGSTQVLENGRLEAPPRPLDAQEAMAML----KEGQSVQSAMYVPLLHRCIET 91
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
++ G ++TG I +++V +SL+ +Y +C DA +F+EMP +NVV+WTA+I
Sbjct: 92 GSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALI 151
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ Q + LE++ M P+D+T +LSAC S + G+ H TI+ G
Sbjct: 152 TGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAA 211
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ-HGLAVRAIDLFEE 327
S + NSL +Y K GN+E + F + K++++W +MI+ A+ ++LF +
Sbjct: 212 SITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLD 271
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M+K V P+ T V+S C + GK K G L + + L R G
Sbjct: 272 MLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGE 331
Query: 388 LEEARDFIKQMPIYPNAVI-WEA 409
EEA ++M N+VI W A
Sbjct: 332 TEEAMRLFEEME--DNSVITWNA 352
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 16/300 (5%)
Query: 112 PVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVY 171
PV+ +E + M L R D + L +++C ++ NI G I+ G +
Sbjct: 160 PVLALEVFVEM---LKLGRYPSDYT-LGGMLSACVASHNIDLGKQVHGYTIKYGAASITS 215
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNS 230
+G+SL LY+K + + F+ +P +NV++WT +I+A A+ E ++ L L+ M
Sbjct: 216 IGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKG 275
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ PN+FT TS++S C S + G+ ++G + + V NS + +Y + G EEA
Sbjct: 276 EVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEA 335
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQ-----------HGLAVRAIDLFEEMMKQRVKPDAIT 339
+ +F M +++WN+MI+G+AQ +A+ +F ++++ +KPD T
Sbjct: 336 MRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFT 395
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
F ++S C +E+G+ K G ++ S +V++ + G +E A +MP
Sbjct: 396 FSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMP 455
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 130/265 (49%), Gaps = 31/265 (11%)
Query: 105 FDQLLDTPVVDVE------KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQ 158
F Q++D+ D+ + + + DL R +K D S+ ++ C + + G
Sbjct: 357 FAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIH 416
Query: 159 CLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
I+TGF+++V V S+L+ +Y+KC I A K F EMP R +V+WT++I+ ++Q +
Sbjct: 417 AQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPH 476
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA---- 274
++L+ M + +PN+ TF S+LSAC+ +G + + M +F +Q
Sbjct: 477 DAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEA---------MRYFDMMQNEYHIE 527
Query: 275 ------NSLISMYCKCGNVEEAVYVFNNMHG--KDIVSWNSMIAGYAQHG---LAVRAID 323
+I M+ + G +++A Y F G + W+S++AG HG LA A D
Sbjct: 528 PLMDHYGCMIDMFVRLGRLDDA-YAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAAD 586
Query: 324 LFEEMMKQRVKPDAITFLGVISSCR 348
E+ + V+ + IS+ R
Sbjct: 587 RLLELKPKVVETYVLLLNMYISTGR 611
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 218/402 (54%), Gaps = 23/402 (5%)
Query: 119 LISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
L+ M + +R + + L+ C + +R G +R G + ++G SL++
Sbjct: 491 LVMMDSGMDPDRFTIGSLLLA-----CARLKFLRCGKEIHGFMLRNGLELDEFIGISLMS 545
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
LY +C ++ +F++M +++V W +I F+Q L+ +R M + ++P +
Sbjct: 546 LYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIA 605
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
T +L AC+ AL G+ H ++ V +LI MY KCG +E++ +F+ ++
Sbjct: 606 VTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVN 665
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
KD WN +IAGY HG ++AI+LFE M + +PD+ TFLGV+ +C H GLV EG
Sbjct: 666 EKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLK 725
Query: 359 YFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------- 407
Y M +G+KP+L+HY+CVVD+LGRAG L EA + +MP P++ IW
Sbjct: 726 YLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNY 785
Query: 408 -------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
E ++ L LEP A +V L+NLYAG+ WD+ +VR+ MK+ GL + GCSW
Sbjct: 786 GDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSW 845
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
IEI +VYRF D S + +I L ++ +GY P+
Sbjct: 846 IEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPD 887
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 126/249 (50%), Gaps = 3/249 (1%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
E L D + + T + +C + +R G LA + G V V +SL+ +YSKC +
Sbjct: 292 EEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLG 351
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSAC 246
+A +F+ +NVVSW II +++E EL + M R + N+ T ++L AC
Sbjct: 352 EARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPAC 411
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+G L + H R GF VAN+ ++ Y KC +++ A VF M GK + SWN
Sbjct: 412 SGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWN 471
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++I +AQ+G +++DLF MM + PD T ++ +C + GK M ++
Sbjct: 472 ALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRN 531
Query: 367 GLKPELDHY 375
GL ELD +
Sbjct: 532 GL--ELDEF 538
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 117/221 (52%), Gaps = 4/221 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L D L +C ++ G LA++ G ++ +VG++LI +Y KC + A
Sbjct: 191 LAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAV 250
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM---RNSMLEPNDFTFTSILSACT 247
KVFE M RN+VSW +++ A ++ C +++ + L P+ T +++ AC
Sbjct: 251 KVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACA 310
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G + G H ++G + V NSL+ MY KCG + EA +F+ GK++VSWN+
Sbjct: 311 AVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNT 370
Query: 308 MIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSC 347
+I GY++ G +L +EM + ++V+ + +T L V+ +C
Sbjct: 371 IIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPAC 411
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 1/292 (0%)
Query: 115 DVEKLISMHHDLHRE-RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
D + + ++ RE +++V+ + + +C + A R GF+ + V
Sbjct: 380 DFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVA 439
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++ + Y+KC + A +VF M + V SW A+I A AQ L+L+ +M +S ++
Sbjct: 440 NAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMD 499
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ FT S+L AC L G+ H +R G + SL+S+Y +C ++ +
Sbjct: 500 PDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLI 559
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M K +V WN MI G++Q+ L A+D F +M+ +KP I GV+ +C +
Sbjct: 560 FDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSAL 619
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
GK K L + ++D+ + G +E++++ ++ AV
Sbjct: 620 RLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAV 671
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIAN-VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+CG +NI G L + + N V + + +I +YS C D+ VF+ +++
Sbjct: 101 ACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLF 160
Query: 203 SWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
+ A+++ +++ + L+ ++ + L P++FT + AC G + G + H
Sbjct: 161 LYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHAL 220
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ G FS V N+LI+MY KCG VE AV VF M +++VSWNS++ +++G
Sbjct: 221 ALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGEC 280
Query: 322 IDLFEEMM---KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+F+ ++ ++ + PD T + VI +C G V G V K G+ E+ + +
Sbjct: 281 CGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSL 340
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
VD+ + G L EAR M N V W
Sbjct: 341 VDMYSKCGYLGEARALF-DMNGGKNVVSW 368
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 227/405 (56%), Gaps = 25/405 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + V++C + G + ++ G V +SLI +Y K + A ++FEEMP
Sbjct: 244 LLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 303
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
VR++VSW +++ + ++L+ +M+ + + P+ T ++L ACT +G Q S
Sbjct: 304 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 363
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H R GF + I +A +L+++Y K G + + +F + +D ++W +M+AGYA H
Sbjct: 364 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHAC 423
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
AI LF+ M+K+ V+ D +TF ++S+C H GLVEEGK YF+ M++ + ++P LDHYS
Sbjct: 424 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYS 483
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C+VDLLGR+G LE+A + IK MP+ P++ +W E AE L L+P
Sbjct: 484 CMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPS 543
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
++ L+N+Y+ W A++VR LMK++ L NPGCS+IE N ++RF D+ + R
Sbjct: 544 DHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPR 603
Query: 480 LSEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRTE 517
EI L+ L+ ++ G P ++ EE D +K +E
Sbjct: 604 SDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSE 648
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 52/370 (14%)
Query: 126 LHRERLKVDA--SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV-----YVGSSLIT 178
LH L D+ L A++SC S C AI I ++ ++G L++
Sbjct: 131 LHNSSLLADSIVQSLVFAISSCTSVS--------YCSAIHARVIKSLNYSDGFIGDRLVS 182
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDF 237
+Y K DA ++F+EMP R++VSW ++++ + + CL + RM S +PN+
Sbjct: 183 MYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEV 242
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T S++SAC GAL +G+S H +++G +V NSLI+MY K G ++ A +F M
Sbjct: 243 TLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 302
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+ +VSWNSM+ + +G A + +DLF M + + PD T + ++ +C GL + +
Sbjct: 303 PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAE 362
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLE 417
+ + G ++ + +++L + G L + D +++ + + W A
Sbjct: 363 SIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR-DTIAWTA-------- 413
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN------------------PGCS 459
LA YA C +A ++ LM +G++ + G
Sbjct: 414 --------MLAG-YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 464
Query: 460 WIEIMNVVYR 469
+ EIM+ VYR
Sbjct: 465 YFEIMSEVYR 474
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 228/405 (56%), Gaps = 25/405 (6%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + V++C + G + ++ G V +SLI +Y K + A ++FEEMP
Sbjct: 224 LLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 283
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
VR++VSW +++ + ++L+ +M+ + + P+ T ++L ACT +G Q S
Sbjct: 284 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 343
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H R GF + I +A +L+++Y K G + + +F + +D ++W +M+AGYA H
Sbjct: 344 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 403
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
AI LF+ M+K+ V+ D +TF ++S+C H GLVEEGK YF+ M++ + ++P LDHYS
Sbjct: 404 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYS 463
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C+VDLLGR+G LE+A + IK MP+ P++ +W E AE L L+P
Sbjct: 464 CMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPS 523
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
++ L+N+Y+ W A++VR LMK++ L NPGCS+IE N ++RF D+ + R
Sbjct: 524 DHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPR 583
Query: 480 LSEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRTE 517
EI L+ L+ +++ G P ++ EE D +K +E
Sbjct: 584 SDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSE 628
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 169/356 (47%), Gaps = 50/356 (14%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV-----YVGSSLITLYSKCRVIIDAYKV 192
L A++SC S C AI I ++ ++G L+++Y K DA ++
Sbjct: 125 LVFAISSCTSVS--------YCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRL 176
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGA 251
F+EMP +++VSW ++++ + + CL + RM S +PN+ T S++SAC GA
Sbjct: 177 FDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGA 236
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L +G+S H +++G +V NSLI+MY K G ++ A +F M + +VSWNSM+
Sbjct: 237 LDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVI 296
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+ +G A + +DLF M + + PD T + ++ +C GL + + + + G +
Sbjct: 297 HNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNAD 356
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLY 431
+ + +++L + G L + D +++ + + W A LA Y
Sbjct: 357 IIIATALLNLYAKLGRLNASEDIFEEIKDR-DRIAWTA----------------MLAG-Y 398
Query: 432 AGVRCWDQAARVRKLMKDKGLKTN------------------PGCSWIEIMNVVYR 469
A C +A ++ LM +G++ + G + EIM+ VYR
Sbjct: 399 AVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYR 454
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 222/406 (54%), Gaps = 18/406 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D K + ++ + L D + + + +C +++ G A+R G + ++G
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 349
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL++LY C A +F+ M R++VSW +IA ++Q D + L+R M + ++P
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ + AC+ AL G+ HC ++ I V++S+I MY K G + + +F
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 469
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ + KD+ SWN +IAGY HG A++LFE+M++ +KPD TF G++ +C H GLVE
Sbjct: 470 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVE 529
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
+G YF+ M H ++P+L+HY+CVVD+LGRAG +++A I++MP P++ IW
Sbjct: 530 DGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 589
Query: 408 ----------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
E ++LL LEPE +V ++NL+AG WD RVR MKD GL+ +
Sbjct: 590 CRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDA 649
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
GCSWIE+ V+ F D+ L E+ L ++ ++GY P+
Sbjct: 650 GCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPD 695
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 132/256 (51%), Gaps = 1/256 (0%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
K D L + +C ++ G +A + +++V+VG++LI +Y KC ++ +A K
Sbjct: 205 KPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVK 264
Query: 192 -VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VF+ M + V SW A++ +AQ L+LY M +S L+P+ FT S+L AC+
Sbjct: 265 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 324
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+L G H +R G + SL+S+Y CG A +F+ M + +VSWN MIA
Sbjct: 325 SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 384
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY+Q+GL AI+LF +M+ ++P I + V +C + GK K L
Sbjct: 385 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTE 444
Query: 371 ELDHYSCVVDLLGRAG 386
++ S ++D+ + G
Sbjct: 445 DIFVSSSIIDMYAKGG 460
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 119/213 (55%), Gaps = 3/213 (1%)
Query: 138 LSTAVTSCGSTRNIR-GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
+ + +CG ++I G ++ ++ T F + + + +IT+YS C D+ VF+++
Sbjct: 108 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 167
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+N+ W AI++A+ + + + ++ ++ + +P++FT ++ AC G LG G
Sbjct: 168 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 227
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV-YVFNNMHGKDIVSWNSMIAGYAQ 314
+ H +M S + V N+LI+MY KCG VEEAV VF+ M K + SWN+++ GYAQ
Sbjct: 228 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQ 287
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ +A+DL+ +M + PD T ++ +C
Sbjct: 288 NSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 320
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS-LISMYCKCGNVEEAVYVFNNMHGK 300
+L AC + GR H F V N+ +I+MY CG+ ++ VF+ + K
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVY 359
++ WN++++ Y ++ L A+ +F E++ KPD T VI +C GL++ G
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGL-- 226
Query: 360 FDSMAKHGLKPELDHYS------CVVDLLGRAGLLEEA 391
HG+ ++D S ++ + G+ GL+EEA
Sbjct: 227 --GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEA 262
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 218/419 (52%), Gaps = 19/419 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + ++ E + D ++ + C R + G +++V ++L+ +
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDM 441
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-NSMLEPNDFT 238
Y+KC + +A VF EM V++++SW +I +++ + L L+ ++ P++ T
Sbjct: 442 YAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERT 501
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+L AC A +GR H +R G+FS VANSL+ MY KCG + A +F+++
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDIT 561
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
KD+VSW MIAGY HG AI LF +M + ++PD I+F+ ++ +C H GLV+EG
Sbjct: 562 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWR 621
Query: 359 YFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-------- 409
+F+ M ++P ++HY+C+VD+L R G L +A FI+ MPI P+A IW A
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIH 681
Query: 410 ---------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
AE LEPE +V +AN+YA W++ R+RK + +GL+ NPGCSW
Sbjct: 682 HDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSW 741
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEPF 519
IEI V F A D SN +I L + +M GY P +D ++ E
Sbjct: 742 IEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEAL 800
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 192/396 (48%), Gaps = 28/396 (7%)
Query: 33 SQKLKQISSSKSLHKALRVLDI-----ISPRTRDS-------TKTEVHLRLIQDFLQTDS 80
+ +L++ S +L A+++L + I PRT S +K+ + + +F++ +
Sbjct: 65 NTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNG 124
Query: 81 KHLDSQ---KFNHDFTGTNSTFGSSNVFDQLLDTPVV-------------DVEKLISMHH 124
LDS K +T +S VFDQ+ + D I +
Sbjct: 125 FVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFK 184
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
+ +++D+ S S S R++ GG +++GF VG+SL+ Y K
Sbjct: 185 KMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNH 244
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ A KVF+EM R+V+SW +II + + L ++ M S +E + T S+ +
Sbjct: 245 RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFA 304
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
C S + GR+ HC ++ F + N+L+ MY KCG+++ A VF M G+ +VS
Sbjct: 305 GCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVS 364
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
+ SMIAGYA+ GLA A+ LFEEM ++ + PD T V++ C L++EGK + +
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIK 424
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
++ + ++ + ++D+ + G + EA +M +
Sbjct: 425 ENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRV 460
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 217/383 (56%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+T + + I G AI+ G +++V +LI +YSKC + DA+ VF+EMP
Sbjct: 236 FATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMP 295
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ +V W +IIA +A + L+LY MR+S ++ + FTF+ I+ C+ ++ + +
Sbjct: 296 DKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQ 355
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R GF + +L+ Y K G V++A +VF+ M ++I+SWN++IAGY HG
Sbjct: 356 VHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGH 415
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
AID+FE+M+++ + P+ +TFL V+S+C GL E G F SM + H +KP H++
Sbjct: 416 GEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFA 475
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
C+++LLGR GLL+EA I++ P P A +W AAE +EPE
Sbjct: 476 CMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPE 535
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+ ++ L N+Y +AA V + +K KGL+ P CSWIE+ N + F + DK + +
Sbjct: 536 KLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQ 595
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+ +++ +D L+ + LGYVPE
Sbjct: 596 IEKVVGKVDELMLNISKLGYVPE 618
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 140/277 (50%), Gaps = 1/277 (0%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
V S + +C ++IRG + GF + Y+ + ++ ++ KC ++IDA ++
Sbjct: 130 VGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRL 189
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+EMP RN VSW II+ + L+ +MR + TF +++ A G +
Sbjct: 190 FDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEII 249
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
GR H I+ G I V+ +LI MY KCG++E+A VF+ M K IV WNS+IAGY
Sbjct: 250 FPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGY 309
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
A HG + A+DL+ EM VK D TF +I C V K S+ ++G ++
Sbjct: 310 ALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDV 369
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD + G +++AR +M N + W A
Sbjct: 370 VANTALVDFYSKWGKVDDARHVFDRMSC-RNIISWNA 405
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 220/406 (54%), Gaps = 18/406 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK I++ + E + + A+ +C ++ G + +++ V +SL
Sbjct: 331 EKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSL 390
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I++YSKC+ + A +F + R VSW A+I +AQ +V L + M++ ++P+
Sbjct: 391 ISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDS 450
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT S++ A + H IR I V +L+ MY KCG + A +F+
Sbjct: 451 FTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDM 510
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ + +++WN+MI GY HGL A+DLF++M K V+P+ IT+L VIS+C H GLV+EG
Sbjct: 511 ISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEG 570
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
+F SM + +GL+P +DHY +VDLLGRAG ++EA DFI+ MPI P ++
Sbjct: 571 LRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACK 630
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
+AA+ L P+ HV LAN+YA W + A VRK M+ KGLK PGC
Sbjct: 631 IHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGC 690
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
S +E+ N V+ F + ++ + I L+ LV ++K GYVP+ +
Sbjct: 691 SVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTN 736
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 137/254 (53%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
CG +++ G I F ANV+ + ++ +Y+KCR I DAYK+F+ MP R++VSW
Sbjct: 157 CGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSW 216
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
IIA F+Q LEL M++ P+ T ++L A G L G+S H IR
Sbjct: 217 NTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIR 276
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
GF + ++ +L MY KCG+VE A +F+ M K +VSWNSM+ GY Q+G +AI +
Sbjct: 277 AGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAV 336
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
FE+M+++ + P +T + + +C G +E GK + + L ++ + ++ + +
Sbjct: 337 FEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSK 396
Query: 385 AGLLEEARDFIKQM 398
++ A D +
Sbjct: 397 CKRVDIASDIFNNL 410
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E + D+ L T + + + G AIR GF V + ++L +YSKC
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A +F+ M + VVSW +++ + Q + + + ++ M ++P T L A
Sbjct: 299 VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHA 358
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G L +G+ H ++ S I V NSLISMY KC V+ A +FNN++G+ VSW
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI GYAQ+G A++ F EM +KPD+ T + VI + + K + +
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L + + +VD+ + G + AR M + + W A
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLF-DMISDRHVITWNA 521
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 126/248 (50%), Gaps = 3/248 (1%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C S + + P L I+ G + L++L+SK I +A +VFE + + +
Sbjct: 59 CTSMKELHQIIP---LVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
++ +A+ ++ L MR ++P + FT +L C + L +G+ H Q I
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLIT 175
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
F + + +++MY KC +++A +F+ M +D+VSWN++IAG++Q+G A +A++L
Sbjct: 176 NSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALEL 235
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
M + +PD+IT + V+ + GL+ GK + G ++ + + D+ +
Sbjct: 236 VLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSK 295
Query: 385 AGLLEEAR 392
G +E AR
Sbjct: 296 CGSVETAR 303
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 60/137 (43%)
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
I+ G ++ L+S++ K G++ EA VF + K +++M+ GYA++ A+
Sbjct: 73 IKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL 132
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
M VKP F ++ C ++ GK + + + + VV++
Sbjct: 133 AFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMY 192
Query: 383 GRAGLLEEARDFIKQMP 399
+ +++A +MP
Sbjct: 193 AKCRQIDDAYKMFDRMP 209
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 229/411 (55%), Gaps = 20/411 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ ++ + + D+ + ++ D S + T V++C + +I G GF +N+ + +
Sbjct: 203 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVN 262
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+LI LYSKC + A +FE +P ++V+SW +I + L L++ M S P
Sbjct: 263 ALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 322
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVY 292
ND T SIL AC GA+ GR H + G + + SLI MY KCG++E A
Sbjct: 323 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQ 382
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VFN++ K + SWN+MI G+A HG A + D+F M K ++PD ITF+G++S+C H G+
Sbjct: 383 VFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 442
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---- 407
++ G+ F SM + + + P+L+HY C++DLLG +GL +EA + I M + P+ VIW
Sbjct: 443 LDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 502
Query: 408 -------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
A++ + +EPE ++V L+N+YA W++ A R L+ DKG+K
Sbjct: 503 KACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKK 562
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
PGCS IEI +VV+ F DK + R EI +L+ + ++ G+VP+ E
Sbjct: 563 VPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSE 613
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 146/285 (51%), Gaps = 35/285 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE------ 195
+ SC ++ + G ++ G ++YV +SLI++Y + + DA+KVF+E
Sbjct: 98 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDV 157
Query: 196 -------------------------MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
+PV++VVSW A+I+ +A+ LEL++ M +
Sbjct: 158 VSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 217
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ P++ T +++SAC SG++ GR H GF S +++ N+LI +Y KCG +E A
Sbjct: 218 NVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETA 277
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F + KD++SWN++I GY L A+ LF+EM++ P+ +T L ++ +C H
Sbjct: 278 CGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 337
Query: 351 GLVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G ++ G+ VY D K G+ + ++D+ + G +E A
Sbjct: 338 GAIDIGRWIHVYIDKRLK-GVANASSLRTSLIDMYAKCGDIEAAH 381
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 162 IRTGFIANVYVGSSLI---TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
I+TG Y S LI L + A VFE + N++ W + A
Sbjct: 14 IKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPV 73
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L+LY M + L PN +TF +L +C S A +G+ H +++G + V SLI
Sbjct: 74 SALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLI 133
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG-----------LAVR------- 320
SMY + G +E+A VF+ +D+VS+ ++I GYA G + V+
Sbjct: 134 SMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNA 193
Query: 321 -------------AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
A++LF++MMK V+PD T + V+S+C G +E G+ + HG
Sbjct: 194 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHG 253
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
L + ++DL + G LE A + +P Y + + W
Sbjct: 254 FGSNLKIVNALIDLYSKCGELETACGLFEGLP-YKDVISW 292
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYC----KCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
R H Q I+ G + + LI +C + A+ VF + +++ WN+M G
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIE-FCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 65
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+A V A+ L+ M+ + P++ TF ++ SC +EG+ + K G +
Sbjct: 66 HALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLD 125
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMP 399
L ++ ++ + + G LE+A + P
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDESP 153
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/409 (33%), Positives = 230/409 (56%), Gaps = 19/409 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN-VYVGSS 175
EK + + + + + +D + + + + + G AI++G N V + ++
Sbjct: 357 EKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNA 416
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+ Y+KC + D KVF M R+++SWT+++ A++Q + D +E++ MR + PN
Sbjct: 417 VANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPN 476
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
FTF+S+L +C L G+ H ++G + ++L+ MY KCG + +A VFN
Sbjct: 477 QFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFN 536
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ D VSW ++IAG+AQHG+ A+ LF M++ V+P+A+TFL V+ +C HGGLVEE
Sbjct: 537 RISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEE 596
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
G YF M K +GL PE++HY+C+VDLL R G L +A +FI +MP+ PN ++W+
Sbjct: 597 GLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGAC 656
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AA+ L + E +AT+V L+N Y + +R +MK++G+K PG
Sbjct: 657 RVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPG 716
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
CSWI + +++F A D+ + +I L+ L ++ +L VP++ E
Sbjct: 717 CSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSYE 765
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%)
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSKC I A ++F++M RN SWT +IA A+ E + M++ + P+ F +
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+ IL C G ++ G H Q + GF S+ V+ +L++MY K +E++ VFN M
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
++VSWN+MI G+ + L + A DLF MM + V PDA TF+GV + V + K
Sbjct: 235 VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ G+ + ++D+ + G L+EAR
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEAR 327
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 156/325 (48%), Gaps = 17/325 (5%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKVDASFLSTAVT-----------SCGS 147
S VF+ + + VV +I+ +DL+ + + + VT + G
Sbjct: 225 SYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGM 284
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE--MPVRNVVSWT 205
R++ A+ G +N VG++LI + SKC + +A +F + R W
Sbjct: 285 LRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWN 344
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
A+I+ + + + LEL+ M + + + +T+ S+ +A L G+ H + I+
Sbjct: 345 AMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKS 404
Query: 266 GF-FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G +Y+ ++N++ + Y KCG++E+ VFN M +D++SW S++ Y+Q +AI++
Sbjct: 405 GLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEI 464
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F M + + P+ TF V+ SC + L+E G+ + K GL + S +VD+ +
Sbjct: 465 FSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAK 524
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G L +A+ ++ + V W A
Sbjct: 525 CGCLGDAKKVFNRIS-NADTVSWTA 548
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 26/308 (8%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G + + IR GF ++ +V ++L+ +Y+K + I D+YKVF M NVVSW A+I F
Sbjct: 190 GNMVHAQIVIR-GFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+L+ M + P+ TF + A + + + + +G S
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL 308
Query: 273 VANSLISMYCKCGNVEEAVYVFNN--MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V +LI M KCG+++EA +FN+ + + WN+MI+GY + G +A++LF +M +
Sbjct: 309 VGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQ 368
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS---CVVDLLGRAGL 387
+ D T+ V ++ + GK K GL E+++ S V + + G
Sbjct: 369 NDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGL--EVNYVSISNAVANAYAKCGS 426
Query: 388 LEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
LE+ R +M E R L+ + L Y+ WD+A + M
Sbjct: 427 LEDVRKVFNRM------------EDRDLI------SWTSLVTAYSQCSEWDKAIEIFSNM 468
Query: 448 KDKGLKTN 455
+ +G+ N
Sbjct: 469 RAEGIAPN 476
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSY--IQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+L C + L Q ++ H ++ F ++ + + N + Y KC +++ A +F+ M
Sbjct: 74 LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
++ SW +IAG A++GL + + F EM Q + PD + G++ C +E G +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + ++++ + +E++ M N V W A
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT-EVNVVSWNA 242
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 220/406 (54%), Gaps = 18/406 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK I++ + E + + A+ +C ++ G + +++ V +SL
Sbjct: 331 EKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSL 390
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I++YSKC+ + A +F + R VSW A+I +AQ +V L + M++ ++P+
Sbjct: 391 ISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDS 450
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT S++ A + H IR I V +L+ MY KCG + A +F+
Sbjct: 451 FTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDM 510
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ + +++WN+MI GY HGL A+DLF++M K V+P+ IT+L VIS+C H GLV+EG
Sbjct: 511 ISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEG 570
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
+F SM + +GL+P +DHY +VDLLGRAG ++EA DFI+ MPI P ++
Sbjct: 571 LRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACK 630
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
+AA+ L P+ HV LAN+YA W + A VRK M+ KGLK PGC
Sbjct: 631 IHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGC 690
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
S +E+ N V+ F + ++ + I L+ LV ++K GYVP+ +
Sbjct: 691 SVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTN 736
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 137/254 (53%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
CG +++ G I F ANV+ + ++ +Y+KCR I DAYK+F+ MP R++VSW
Sbjct: 157 CGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSW 216
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
IIA F+Q LEL M++ P+ T ++L A G L G+S H IR
Sbjct: 217 NTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIR 276
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
GF + ++ +L MY KCG+VE A +F+ M K +VSWNSM+ GY Q+G +AI +
Sbjct: 277 AGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAV 336
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
FE+M+++ + P +T + + +C G +E GK + + L ++ + ++ + +
Sbjct: 337 FEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSK 396
Query: 385 AGLLEEARDFIKQM 398
++ A D +
Sbjct: 397 CKRVDIASDIFNNL 410
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E + D+ L T + + + G AIR GF V + ++L +YSKC
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A +F+ M + VVSW +++ + Q + + + ++ M ++P T L A
Sbjct: 299 VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHA 358
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C G L +G+ H ++ S I V NSLISMY KC V+ A +FNN++G+ VSW
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI GYAQ+G A++ F EM +KPD+ T + VI + + K + +
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L + + +VD+ + G + AR M + + W A
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLF-DMISDRHVITWNA 521
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 126/248 (50%), Gaps = 3/248 (1%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C S + + P L I+ G + L++L+SK I +A +VFE + + +
Sbjct: 59 CTSMKELHQIIP---LVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
++ +A+ ++ L MR ++P + FT +L C + L +G+ H Q I
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLIT 175
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
F + + +++MY KC +++A +F+ M +D+VSWN++IAG++Q+G A +A++L
Sbjct: 176 NSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALEL 235
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
M + +PD+IT + V+ + GL+ GK + G ++ + + D+ +
Sbjct: 236 VLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSK 295
Query: 385 AGLLEEAR 392
G +E AR
Sbjct: 296 CGSVETAR 303
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 60/137 (43%)
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
I+ G ++ L+S++ K G++ EA VF + K +++M+ GYA++ A+
Sbjct: 73 IKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL 132
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
M VKP F ++ C ++ GK + + + + VV++
Sbjct: 133 AFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMY 192
Query: 383 GRAGLLEEARDFIKQMP 399
+ +++A +MP
Sbjct: 193 AKCRQIDDAYKMFDRMP 209
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 231/406 (56%), Gaps = 18/406 (4%)
Query: 122 MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
M +L R +D + +C ++++ G C+ ++ G +V ++L+ +Y+
Sbjct: 138 MFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYA 197
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
+C+V+ DA+++F +M R++ +WT +I A A+ L + MRN + P+ +
Sbjct: 198 RCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVT 257
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
++ AC GA+ + ++ H G+ + + ++I MY KCG+VE A ++F+ M ++
Sbjct: 258 VVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRN 317
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+++W++MIA Y HG +A++LF M++ + P+ ITF+ ++ +C H GL+EEG+ +F
Sbjct: 318 VITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFS 377
Query: 362 SM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----------- 409
SM ++G+ P++ HY+C+VDLLGRAG L+EA + I+ MP+ + V+W A
Sbjct: 378 SMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHL 437
Query: 410 ------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
A S L L+ + +V L+N+YA W+ A+ R LM GL+ PG +WIE+
Sbjct: 438 DLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEV 497
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
+Y+F DK++ R +EI +L L ++++ GY P+ ++ D
Sbjct: 498 GEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYD 543
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 4/279 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L D +++ SC RN+ G N+ V + L+ +Y + + DA
Sbjct: 49 LHYDTKRFRSSLLSC---RNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQ 105
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
++F+ M R+ SW+ I+ +A+ C ++R + S +D++ ++ AC
Sbjct: 106 ELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLK 165
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L GR HC T++ G V +L+ MY +C VE+A +F M +D+ +W MI
Sbjct: 166 DLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIG 225
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
A+ G+ V ++ F+ M Q + PD + + V+ +C G + + K + G
Sbjct: 226 ALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSL 285
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + ++D+ + G +E AR +M + N + W A
Sbjct: 286 DVILGTAMIDMYAKCGSVESARWIFDRMQV-RNVITWSA 323
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 213/400 (53%), Gaps = 18/400 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I M L L+ D+ L +++C T ++R G G + NV+V ++L+
Sbjct: 194 IDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDF 253
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + A VF+ M +N+VSW+++I +A L+L+ M N L+P+ +
Sbjct: 254 YGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAM 313
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+L +C GAL G A F + +LI MY KCG ++ A VF M
Sbjct: 314 VGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRK 373
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
KD V WN+ I+G A G A+ LF +M K +KPD TF+G++ +C H GLVEEG+ Y
Sbjct: 374 KDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRY 433
Query: 360 FDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
F+SM L PE++HY C+VDLLGRAG L+EA IK MP+ NA++W A
Sbjct: 434 FNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHR 493
Query: 410 --------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
+ + LEP + +V L+N+YA W++AA++R +M ++G+K PG SWI
Sbjct: 494 DTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWI 553
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
E+ VV++F D S+ +I L L +K GYVP
Sbjct: 554 EVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVP 593
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 185/361 (51%), Gaps = 12/361 (3%)
Query: 67 VHLRLIQDFLQTDSKHLDS-QKFNHDFTGTNSTF------GSSNVF--DQLLDTPVVD-- 115
+H L++ L D+ L+ +F+ +F TN +F N+F + ++ V++
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
++ I ++H + +E L D+ + +C + G L ++ G A+ +V S
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI LY+KC I +A+KVF+++P +N SWTA I+ + + ++++R + L P+
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
F+ +LSAC +G L G G + VA +L+ Y KCGN+E A VF+
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFD 268
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M K+IVSW+SMI GYA +GL A+DLF +M+ + +KPD +GV+ SC G +E
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL 415
G + + + + ++D+ + G ++ A + + M + V+W AA S L
Sbjct: 329 GDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMR-KKDRVVWNAAISGLA 387
Query: 416 L 416
+
Sbjct: 388 M 388
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 69/173 (39%), Gaps = 1/173 (0%)
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G L + H +R+G + N ++ GN + + + +I +N+
Sbjct: 19 GFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNT 78
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI G + +I+++ M K+ + PD+ TF V+ +C E G + K G
Sbjct: 79 MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAG 138
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPEC 420
+ + +++L + G ++ A +P N W A S + +C
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIP-DKNFASWTATISGYVGVGKC 190
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 227/433 (52%), Gaps = 51/433 (11%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
DVE + + + + L+ D S V + + G I++G++ V V +
Sbjct: 183 DVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSN 242
Query: 175 SLITLYSKCRVIIDAYKVFEEM-------------------------------PVRNVVS 203
S+++ YSK D KVFE + P +NVVS
Sbjct: 243 SILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVS 302
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT++I +A+ + L + M + ++P+DFTF ++L AC+ LG G+ H I
Sbjct: 303 WTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSII 362
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
GF +Y+ V N L++MY KCG+++ + F + GKD+VSWN+M+ G HG A +A++
Sbjct: 363 HYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALE 422
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLL 382
L+EEM+ +KPD +TF+G++ +C H GL+E+G+ F+SM +GL E +H C+VDLL
Sbjct: 423 LYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLL 482
Query: 383 GRAGLLEEARDFIKQMP-------IYPNAVI---WEAAESRL---------LLEPECAAT 423
GR G L +AR+ + + P A++ + +E R+ + EP+ +
Sbjct: 483 GRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMS 542
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
+V L+NLY W +A VRK M D G+K PGCSWIE+ N V F A + S+ + E+
Sbjct: 543 YVLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHPYMEEL 602
Query: 484 LPVLDFLVDQMKT 496
+L+FL +M+
Sbjct: 603 CKILNFLKFEMRN 615
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 63/355 (17%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + + H + + D + +++C +R G + +G +++ VG+SL
Sbjct: 53 QQALCLFHHMRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSL 112
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI----------------------------- 207
I +Y KC A +VFEEM + N VSW ++
Sbjct: 113 IDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWN 172
Query: 208 --IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
I+ + Q V++CL L++ MR L+P+ +TF+++++A G H I+
Sbjct: 173 IMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKS 232
Query: 266 GFFSYIQVANSLISMYC-------------------------------KCGNVEEAVYVF 294
G+ ++V+NS++S Y K G+ EA VF
Sbjct: 233 GWVKAVEVSNSILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVF 292
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
K++VSW SMI GYA++G +A+ F +MM+ ++PD TF V+ +C +
Sbjct: 293 QLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLG 352
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GK+ S+ +G +D + +V++ + G ++ + K++ + + V W A
Sbjct: 353 HGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEI-LGKDLVSWNA 406
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 31/210 (14%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
++++ +S I +K I A ++F+EMP ++ V+W A++A+++Q L L+ M
Sbjct: 3 SHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHM 62
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC--- 284
R + P+ FTFT+ LSAC G G L +G H Q + G S + V NSLI MY KC
Sbjct: 63 RIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSA 122
Query: 285 ----------------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
G + A VF+ M K ++WN MI+GY Q G
Sbjct: 123 TSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCG 182
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+ LF++M + ++PD TF ++++
Sbjct: 183 DVELCLGLFKKMREDSLQPDQWTFSALVNA 212
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
S++ S I K G + A +F+ M KD V+WN+M+A Y+Q GL +A+ LF M
Sbjct: 3 SHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHM 62
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
+PD TF +S+C G + G + G + L + ++D+ G+
Sbjct: 63 RIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSA 122
Query: 389 EEARDFIKQMPIYPNAVIW 407
AR ++M I N V W
Sbjct: 123 TSARRVFEEMSIM-NEVSW 140
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 210/367 (57%), Gaps = 23/367 (6%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N ++++T Y++C I A +F+EMP R+ +SW A+I+ +AQ Q + L L+ M+
Sbjct: 338 NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMK 397
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N LS+C AL G+ H + ++ GF + N+L++MY KCG++E
Sbjct: 398 RDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIE 457
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA VF ++ KDIVSWN+MIAGYA+HG A+ LFE MK +KPD +T +GV+S+C
Sbjct: 458 EAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES-MKMTIKPDDVTLVGVLSACS 516
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV++G YF+SM + +G+ HY+C++DLLGRAG L+EA + +K MP YP+A W
Sbjct: 517 HTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATW 576
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
+AAE +EP+ + +V L+NLYA W + +R M+DK
Sbjct: 577 GALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDK 636
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE----VHEE 506
G+K PG SW+EI N + F D S+ I L+ L ++K G+V +H+
Sbjct: 637 GVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDV 696
Query: 507 KVDDASH 513
+ ++ H
Sbjct: 697 EEEEKEH 703
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 147/305 (48%), Gaps = 23/305 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDLHR----ERL---KVDASFLSTAVTSCGSTRNIR---G 153
+FDQ+L + L+S + R RL K+D +S G R R
Sbjct: 175 IFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDA 234
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
+ + + +R N+ +IT Y++ ++ +A ++FEE+P+R+V +WTA+++ F Q
Sbjct: 235 RSLFDRMPVRDKISWNI-----MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQ 289
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+D ++ M E N+ ++ ++++ S + + R Q S+
Sbjct: 290 NGMLDEATRIFE----EMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSW--- 342
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
N++++ Y +CGN+++A +F+ M +D +SW +MI+GYAQ G + A+ LF +M +
Sbjct: 343 -NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGG 401
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+ +SSC +E GK + K G + + ++ + G+ G +EEA D
Sbjct: 402 ILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFD 461
Query: 394 FIKQM 398
+ +
Sbjct: 462 VFEDI 466
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 20/226 (8%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+++ Y K + A +F +MP ++VVSW A+++ FAQ + +E R + + ML N
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQ----NGFVEEARKIFDQMLVKN 183
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+ ++ +LSA +G + R + S+ N L+ Y + +++A +F+
Sbjct: 184 EISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSW----NCLMGGYVRKKRLDDARSLFD 239
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M +D +SWN MI GYAQ+GL A LFEE+ + D + ++S G+++E
Sbjct: 240 RMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGMLDE 295
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLG--RAGLLEEARDFIKQMP 399
F+ M PE + S + G ++ +E+AR+ QMP
Sbjct: 296 ATRIFEEM------PEKNEVSWNAMIAGYVQSQQIEKARELFDQMP 335
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 20/237 (8%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
++V W I+A+ ++ Q + L ++ N M + T+ +++S + R
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVF----NGMRRRSTVTYNAMISGYLSNNKFDCARKVF 114
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+ S+ N ++S Y K GN+ A +FN M KD+VSWN+M++G+AQ+G
Sbjct: 115 EKMPDRDLISW----NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A +F++M+ + + I++ G++S+ G +E+ + FDS + E+ ++C++
Sbjct: 171 EARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSK----MDWEIVSWNCLM 222
Query: 380 DLLGRAGLLEEARDFIKQMPIYP----NAVIWEAAESRLLLEPECAATHVQLANLYA 432
R L++AR +MP+ N +I A++ LL E + + +++A
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFA 279
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + R+ ++ S L+ A++SC + G ++ GF G++L
Sbjct: 387 EEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNAL 446
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC I +A+ VFE++ +++VSW +IA +A+ L L+ M+ + ++P+D
Sbjct: 447 LAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDD 505
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS-----LISMYCKCGNVEEAV 291
T +LSAC+ +G + +G + + +Y AN+ +I + + G ++EA+
Sbjct: 506 VTLVGVLSACSHTGLVDKG----MEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEAL 561
Query: 292 YVFNNM-HGKDIVSWNSMIAGYAQHG 316
+ +M D +W +++ HG
Sbjct: 562 NLMKSMPFYPDAATWGALLGASRIHG 587
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A KVFE+MP R+++SW +++ + + + L R + N M E + ++ ++LS
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVK----NGNLSAARALFNQMPEKDVVSWNAMLSGFAQ 165
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+G + + R Q + S+ N L+S Y + G +E+A +F++ +IVSWN +
Sbjct: 166 NGFVEEARKIFDQMLVKNEISW----NGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCL 221
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ GY + A LF+ M + D I++ +I+ GL+ E + F+ +
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVR----DKISWNIMITGYAQNGLLSEARRLFEELPIR-- 275
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ ++ +V + G+L+EA ++MP N V W A
Sbjct: 276 --DVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNA 313
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 213/369 (57%), Gaps = 18/369 (4%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
L +++G ++Y GSSLI +YSK ++ DA VF M R++V W A+I AQ Q +
Sbjct: 442 LIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEE 501
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
++L+ ++ S L PN+FTF ++++ + ++ G+ H Q I+ G S V+N+LI
Sbjct: 502 AVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALID 561
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY KCG ++E +F + GKD++ WNSMI+ YAQHG A A+ +F M V+P+ +T
Sbjct: 562 MYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVT 621
Query: 340 FLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
F+GV+S+C H GLV+EG +FD M K+ ++P +HY+ VV+L GR+G L A++FI++M
Sbjct: 622 FVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERM 681
Query: 399 PIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAA 441
PI P A +W A E LL +P + V ++N+YA W A
Sbjct: 682 PIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQ 741
Query: 442 RVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
++R+ M G+ PG SWIE+M V+ F A + + I +LD L +K GY+P
Sbjct: 742 KLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKNGGYLP 801
Query: 502 EVHEEKVDD 510
+ E + D
Sbjct: 802 DTSELTLLD 810
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 161/314 (51%), Gaps = 23/314 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMH--HDLHRERLKVDASF-------------LSTAVTSCGST 148
+FD++ +V ISMH H + + + A+F L++A+ +C +
Sbjct: 68 LFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQS 127
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
R + G +A+R G NVYVG++LI LY+K I A VF+ +PV+N V+WTA+I
Sbjct: 128 RAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVI 187
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
++Q Q + LEL+ M + P+ F S +SAC+ G L GR H R+
Sbjct: 188 TGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVE 247
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
+ V N+LI +YCKC + A +F+ M +++VSW +MIAGY Q+ A+ +F ++
Sbjct: 248 TDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQL 307
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL--DHY--SCVVDLLGR 384
++ +PD +++SC + +G+ + H +K L D Y + ++D+ +
Sbjct: 308 SQEGWQPDVFACASILNSCGSLAAIWQGR----QVHAHAIKANLESDEYVKNSLIDMYAK 363
Query: 385 AGLLEEARDFIKQM 398
L EAR + +
Sbjct: 364 CEHLTEARAVFEAL 377
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 141/281 (50%), Gaps = 1/281 (0%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+ ++ D L++AV++C + + GG A R + V ++LI LY KC +
Sbjct: 209 DGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSL 268
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A K+F+ M RN+VSWT +IA + Q + ++ + +P+ F SIL++C
Sbjct: 269 ARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGS 328
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A+ QGR H I+ S V NSLI MY KC ++ EA VF + D +S+N+M
Sbjct: 329 LAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAM 388
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I GY++ G AID+F +M +KP +TF+ ++ +E K + K G
Sbjct: 389 IEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGT 448
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+L S ++D+ + L+E+A+ M + VIW A
Sbjct: 449 SLDLYAGSSLIDVYSKFSLVEDAKAVFNLMH-NRDMVIWNA 488
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 138/273 (50%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
++M L +E + D ++ + SCGS I G AI+ ++ YV +SLI +
Sbjct: 301 MAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDM 360
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + +A VFE + + +S+ A+I +++ + ++++ MR L+P+ TF
Sbjct: 361 YAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTF 420
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+L + A+ + H ++ G + +SLI +Y K VE+A VFN MH
Sbjct: 421 VSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHN 480
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+V WN+MI G AQ+ A+ LF ++ + P+ TF+ +++ + G+ +
Sbjct: 481 RDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQF 540
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ K G + + ++D+ + G ++E R
Sbjct: 541 HAQIIKAGADSDHHVSNALIDMYAKCGFIKEGR 573
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 128/249 (51%), Gaps = 3/249 (1%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
A+ TG + ++++ + L+ YSK + DA ++F+ MP +N+VSW + I+ AQ +
Sbjct: 37 AVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDA 96
Query: 221 LELY-RMMRNSMLE-PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+ L+ R S E PN+F S L AC S A+ G+ H +R+G + V +LI
Sbjct: 97 VALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALI 156
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
++Y K G ++ A+ VF+ + K+ V+W ++I GY+Q G A++LF +M V+PD
Sbjct: 157 NLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRF 216
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+S+C G +E G+ + ++ + + ++DL + L AR M
Sbjct: 217 VLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCM 276
Query: 399 PIYPNAVIW 407
N V W
Sbjct: 277 E-NRNLVSW 284
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 73/139 (52%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + L L + VT + ++ G + I+ G ++ +V ++L
Sbjct: 500 EEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNAL 559
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC I + +FE ++V+ W ++I+ +AQ Q + L ++RMM + +EPN
Sbjct: 560 IDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNY 619
Query: 237 FTFTSILSACTGSGALGQG 255
TF +LSAC +G + +G
Sbjct: 620 VTFVGVLSACAHAGLVDEG 638
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
AH + + G + +AN L+ Y K G V +A +F+ M K++VSW S I+ +AQHG
Sbjct: 33 AHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGC 92
Query: 318 AVRAIDLFEEMMKQRV--KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
A+ LF + P+ + +C V G+ + GL +
Sbjct: 93 EEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVG 152
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +++L + G ++ A +P+ N V W A
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPV-KNPVTWTA 185
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 228/391 (58%), Gaps = 29/391 (7%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++A++ C ++ G L I+ G+ +N+ V +SL+ LY K I++A+++F M
Sbjct: 272 LTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMD 331
Query: 198 VRNVVSWTAIIAAFAQEWQV-----------DMCLELYRMMRNSMLEPNDFTFTSILSAC 246
++V+W A+IA AQ ++ L+L+ + S ++P+ FT +S+LS C
Sbjct: 332 DASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVC 391
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ A+ QG H QTI+ GF S + V+ SLISMY KCG++E A F M + +++W
Sbjct: 392 SRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWT 451
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AK 365
SMI G++QHG++ +A+ +FE+M V+P+A+TF+GV+S+C H G+V + YF+ M K
Sbjct: 452 SMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKK 511
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----------------- 408
+ +KP +DHY C+VD+ R G LE+A +FIK+M P+ IW
Sbjct: 512 YKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFY 571
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AAE L L+P+ T+V L N+Y ++ +RVRK+M+++ + SWI I + VY
Sbjct: 572 AAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVY 631
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
F+ K++ + S I L+ L+ ++K +GY
Sbjct: 632 SFKTNGKTHPQSSLICKSLEDLLAKVKNVGY 662
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS + +C S ++++ G + I+ + VGS+L +LYSKC + DA K F +
Sbjct: 171 LSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIR 230
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+NV+SWT+ ++A A L L+ M ++PN+FT TS LS C +L G
Sbjct: 231 EKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQ 290
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+ I+ G+ S ++V NSL+ +Y K G + EA +FN M +V+WN+MIAG+AQ
Sbjct: 291 VYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMME 350
Query: 318 AVR-----------AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+ A+ LF ++ +KPD T V+S C +E+G+ K
Sbjct: 351 LTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKT 410
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G ++ + ++ + + G +E A +M
Sbjct: 411 GFLSDVIVSTSLISMYSKCGSIERASKAFLEM 442
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%), Gaps = 4/292 (1%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
F + C TR+ ++TG N +V S L+ +Y+KC + DA +VF+ M
Sbjct: 69 FYVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNM 128
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
RNVV+WT ++ F Q Q + +++ M + P+ +T +++L AC+ +L G
Sbjct: 129 LRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGD 188
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H I+ V ++L S+Y KCG +E+A+ F+ + K+++SW S ++ A +G
Sbjct: 189 QFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNG 248
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
V+ + LF EM+ +KP+ T +S C +E G + K G + L +
Sbjct: 249 APVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRN 308
Query: 377 CVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAAESRLLLEPECAATH 424
++ L ++G + EA +M + NA+I A+ L + +A H
Sbjct: 309 SLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACH 360
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + L+ +K D LS+ ++ C I G I+TGF+++V V +SLI++
Sbjct: 366 LKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISM 425
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSKC I A K F EM R +++WT++I F+Q L ++ M + + PN TF
Sbjct: 426 YSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTF 485
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA----------NSLISMYCKCGNVEE 289
+LSAC+ +G + Q + +F +Q ++ M+ + G +E+
Sbjct: 486 VGVLSACSHAGMVSQA---------LNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQ 536
Query: 290 AVYVFNNM-HGKDIVSWNSMIAGYAQHG 316
A+ M + W++ IAG HG
Sbjct: 537 ALNFIKKMNYEPSEFIWSNFIAGCKSHG 564
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 217/398 (54%), Gaps = 22/398 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+ S + + +++CG R++ G GF N+ + ++L+ +YSKC I A K+F
Sbjct: 258 NQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLF 317
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ M ++V+ W +I + + L L+ +M + PND TF ++L AC GAL
Sbjct: 318 DGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALD 377
Query: 254 QGRSAHCQTIR----MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
G+ H + G + + + S+I MY KCG VE A VF +M + + SWN+MI
Sbjct: 378 LGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMI 437
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGL 368
+G A +G A RA+ LFEEM+ + +PD ITF+GV+S+C G VE G YF SM K +G+
Sbjct: 438 SGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGI 497
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AE 411
P+L HY C++DLL R+G +EA+ + M + P+ IW + AE
Sbjct: 498 SPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAE 557
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
LEPE + +V L+N+YAG WD A++R + DKG+K PGC+ IEI VV+ F
Sbjct: 558 RLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFL 617
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
DK + + I +LD + ++ G+VP+ E D
Sbjct: 618 VGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYD 655
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 124/229 (54%), Gaps = 4/229 (1%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LIT Y + DA ++F+E+P ++VVSW A+IA + Q + + L + M+ + +
Sbjct: 197 TALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVS 256
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN T S+LSAC +L G+ GF +Q+ N+L+ MY KCG + A +
Sbjct: 257 PNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKL 316
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M KD++ WN+MI GY L A+ LFE M+++ V P+ +TFL V+ +C G +
Sbjct: 317 FDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGAL 376
Query: 354 EEGK---VYFD-SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ GK Y D ++ G + ++ ++ + + G +E A + M
Sbjct: 377 DLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSM 425
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 115/274 (41%), Gaps = 35/274 (12%)
Query: 160 LAIRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMPVR--NVVSWTAIIAAFAQEW 215
L I++G ++ S LI S R + A +F + + N+ W +I A +
Sbjct: 47 LIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTP 106
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
L L+ M +S L PN TF S+ +C S A + + H +++ + V
Sbjct: 107 TPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHT 166
Query: 276 SLISMYCKC-------------------------------GNVEEAVYVFNNMHGKDIVS 304
SLI MY + G+V++A +F+ + KD+VS
Sbjct: 167 SLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVS 226
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN+MIAGY Q G A+ F M + V P+ T + V+S+C H +E GK +
Sbjct: 227 WNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVR 286
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G L + +VD+ + G + AR M
Sbjct: 287 DRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGM 320
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 220/374 (58%), Gaps = 25/374 (6%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ GF ++VY+ +SLI Y+ C + A VF++MP R++VSW A+I AF + + L
Sbjct: 153 LKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETAL 212
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS----YIQVANSL 277
+L+ + EP+ +T S+++AC G AL G AH +R S ++ V NSL
Sbjct: 213 QLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSL 272
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPD 336
+ MYCKCG+++ A +F M D+ SWNSMI G+A HG A++ FE M++ R P+
Sbjct: 273 LDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMIRISRFVPN 332
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
+ITF+GV+S+C H +V EG+ YFD M ++ ++P+L+HY C+VD+L RAGL++EA + +
Sbjct: 333 SITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALELV 392
Query: 396 KQMPIYPNAVIW--------------EAAE--SRLLLEPECA---ATHVQLANLYAGVRC 436
MP+ P+ VIW E +E +R +LE E A +V L+ +YA
Sbjct: 393 ASMPMKPDVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLSRVYASASR 452
Query: 437 WDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKT 496
W+ VRKLM + G+ PGCS IE+ V + F A D S+ + EI VL+ + +++ +
Sbjct: 453 WNDVGLVRKLMTNNGILKEPGCSLIEVDGVTHEFFAGDTSHPQTKEIYQVLNVVEERIDS 512
Query: 497 LGYVPEVHEEKVDD 510
GY P+ + + D
Sbjct: 513 TGYKPDYSQAPMVD 526
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 6/164 (3%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-----PNDFTFTSIL 243
AY+VF+++ N W +I A AQ V + E ++ N+ML+ P++ TF +L
Sbjct: 75 AYRVFDQVDNPNSFMWNILIRACAQSQSVHLKREAI-LLYNTMLQRSSPFPDNHTFPFVL 133
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
AC AL +G+ AH +++GF S + + NSLI Y CG++E A VF+ M + +V
Sbjct: 134 KACAYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLV 193
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
SWN+MI + G A+ LF + +Q +PD T VI++C
Sbjct: 194 SWNAMIDAFVLFGEFETALQLFVQFQQQFFEPDGYTIQSVINAC 237
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQRVK-PDAITFL 341
++ A VF+ + + WN +I AQ L AI L+ M+++ PD TF
Sbjct: 71 DLNYAYRVFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFP 130
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
V+ +C + + EGK + K G + ++ + ++ G LE A++ +MP
Sbjct: 131 FVLKACAYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKMP 188
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 214/389 (55%), Gaps = 25/389 (6%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G + +R GF + +V +SL+ +YS AY+VFE M R+ V+W ++I FA
Sbjct: 155 GEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFAL 214
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ L LYR M + +EP+ FT S+LSAC GAL G H +++G
Sbjct: 215 NGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+N+L+ +Y KCGN +A VF+ M + +VSW S+I G A +GL A+ LF E+ +Q +
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGL 334
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEAR 392
KP ITF+GV+ +C H G+++EG YF M ++G+ P ++H+ C+VDLL RAG + +A
Sbjct: 335 KPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAY 394
Query: 393 DFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVR 435
D+I+ MP+ PNAVIW E A + + LE + V L+NLYA R
Sbjct: 395 DYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASER 454
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W VRK+M KG+K PG S +E+ N VY F D+S+ + E +L + +K
Sbjct: 455 RWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLK 514
Query: 496 TLGYVP-------EVHEEKVDDASHKRTE 517
GYVP ++ EE+ + A TE
Sbjct: 515 IEGYVPRTVNVLADIEEEEKETALSHHTE 543
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACT 247
A ++F ++ N+ +W +I FA+ +EL+ M S + P+ TF + A
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
+ G H +R GF S V NSL+ MY G E A VF M +D V+WNS
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNS 207
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
+I G+A +G+ A+ L+ EM + V+PD T + ++S+C G + G+ M K G
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG 267
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L + ++DL + G +A+ +M
Sbjct: 268 LVQNQHASNALLDLYSKCGNFRDAQKVFDEM 298
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 2/199 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
++++ ++ E ++ D + + +++C + G ++ G + N + ++L+ L
Sbjct: 222 LTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDL 281
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSKC DA KVF+EM R+VVSWT++I A + L+L+ + L+P++ TF
Sbjct: 282 YSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITF 341
Query: 240 TSILSACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCGNVEEAV-YVFNNM 297
+L AC+ G L +G + + G I+ ++ + C+ G V +A Y+ N
Sbjct: 342 VGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMP 401
Query: 298 HGKDIVSWNSMIAGYAQHG 316
+ V W +++ HG
Sbjct: 402 VPPNAVIWRTLLGACTIHG 420
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 254/491 (51%), Gaps = 44/491 (8%)
Query: 14 PCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQ 73
PC Q L II ++ S ++ A V+ + + + + +H+ ++
Sbjct: 4 PCDRRQKSHFLFII-----------VALSSTIAPAALVVALTTNINASTISSSIHVHALK 52
Query: 74 DFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRER--- 130
L +S S H + + +FD +LD +V LI + ++ +
Sbjct: 53 --LGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVL 110
Query: 131 ----------LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
+K DA + + +C + +VY+G++LI +Y
Sbjct: 111 RLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMY 170
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
+ + A K+F+ MP R+V+SWT++I ++Q Q ++L++ M + ++P+ T
Sbjct: 171 GRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVA 230
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S+LSAC G L G + H R G + I V NSLI MYCKCG VE+A+ VF+ M K
Sbjct: 231 SVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDK 290
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D VSW S+I+G A +G A A+DLF +M+++ V+P TF+G++ +C H GLV +G YF
Sbjct: 291 DSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYF 350
Query: 361 DSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------ 407
+SM + HGL P + HY CVVDLL R+G +++A +FIK+MPI P+ V+W
Sbjct: 351 ESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGN 410
Query: 408 ----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIE 462
E A RLL L+P + +V L+N YAGV WD A ++R+LM+D ++ G S IE
Sbjct: 411 VVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIE 470
Query: 463 IMNVVYRFRAE 473
+ +V + E
Sbjct: 471 VDGMVSNYSQE 481
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 233/452 (51%), Gaps = 65/452 (14%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
R+K + + + +C +R G L ++ GF + +V S+L+ +Y C V+ DA
Sbjct: 117 RVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDA 176
Query: 190 Y-----------------------------------------------KVFEEMPVRNVV 202
Y +F+EMP R+VV
Sbjct: 177 YSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVV 236
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SW +I+ +AQ + L++ M++S ++PN T S+L A GAL G+ H
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYA 296
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+ + ++L+ MY KCG+++EA+ VF + ++ ++W+++I +A HG A AI
Sbjct: 297 GKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAI 356
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDL 381
F M K V P+ + ++G++S+C H GLVEEG+ +F M K GL+P ++HY C+VDL
Sbjct: 357 IHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDL 416
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATH 424
LGRAG LEEA + I+ MPI P+ VIW+A AE+ + L P + ++
Sbjct: 417 LGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSY 476
Query: 425 VQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEIL 484
V L+NLYA + W+ ARVR MK ++ +PGCSWIEI +++ F ED S+++ EI
Sbjct: 477 VALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQ 536
Query: 485 PVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
+L + ++++ GY P E ++ +R
Sbjct: 537 AMLGEMSMKLRSNGYRPNTLEVFLNTDEQERA 568
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 56/324 (17%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID-AYKVFEEM 196
LS TSC + R+++ + I+TG I + + +I + ID A VF +M
Sbjct: 22 LSKPFTSCKTPRDLK---QLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQM 78
Query: 197 PVRNVVSWTAIIAAFAQ----EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
P N W I+ A+ Q + + M+ + ++PN FTF S+L AC + L
Sbjct: 79 PEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRL 138
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKC---------------------------- 284
+G+ H ++ GF V ++L+ MY C
Sbjct: 139 REGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKR 198
Query: 285 -------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G+++ A +F+ M + +VSWN MI+GYAQ+G + AI+LF
Sbjct: 199 KQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLF 258
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
+EM + P+ +T + V+ + G +E GK K+ ++ + S +VD+ +
Sbjct: 259 QEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKC 318
Query: 386 GLLEEARDFIKQMPIYPNAVIWEA 409
G ++EA + +P NA+ W A
Sbjct: 319 GSIDEALQVFETLP-KRNAITWSA 341
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 234/435 (53%), Gaps = 58/435 (13%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
LK + S A+ SC + ++ G A+ GF +++V S+L+ +YSKC + DA
Sbjct: 72 LKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDAR 131
Query: 191 KVFEEMPVRNVVSWTA-------------------------------IIAAFAQEWQVDM 219
+F+E+ RN+VSWT+ IIA +AQ
Sbjct: 132 TLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTE 191
Query: 220 CLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+E++ RM+++ + N T +++L AC SG+ G+ H Q I+MG S + V S+I
Sbjct: 192 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSII 251
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MYCKCG VE A F+ M K++ SW++M+AGY HG A A+++F EM VKP+ I
Sbjct: 252 DMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYI 311
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
TF+ V+++C H GL+EEG +F +M+ + ++P ++HY C+VDLLGRAG L+EA D IK
Sbjct: 312 TFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKG 371
Query: 398 MPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQA 440
M + P+ V+W A A L+P+ +V L+N+YA W+
Sbjct: 372 MKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDV 431
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
R+R LMK+ GL PG S ++I V+ F D+ + + +I L+ L +++ +GYV
Sbjct: 432 ERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYV 491
Query: 501 PEV--------HEEK 507
P++ HEEK
Sbjct: 492 PDMTSVLHDVGHEEK 506
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 32/231 (13%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NV SW ++IA A+ L + MR L+PN TF + +C+ L GR AH
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG-------- 311
Q + GF + V+++L+ MY KCG + +A +F+ + ++IVSW SMI G
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159
Query: 312 -----------------------YAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSC 347
YAQ+G++ ++++F M+K + +A+T V+ +C
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
H G GK D + K GL+ + + ++D+ + G +E AR +M
Sbjct: 220 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 270
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 229/426 (53%), Gaps = 53/426 (12%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE--------- 194
+CG+ + G + AI+ G +N++V +++I +Y+ ++ +A +VF+
Sbjct: 41 ACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYS 100
Query: 195 ----------------------EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
EM R+VVSWT IIA + Q L+L+ M +
Sbjct: 101 WNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGP 160
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN+FT S L+AC AL QGR H + ++ SL+ MY KCG ++ A
Sbjct: 161 PPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAK 220
Query: 293 VFNNMHGKD--IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF++ +G + WN+MI GYA HG + AIDLFE+M ++V P+ +TF+ ++++C HG
Sbjct: 221 VFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHG 280
Query: 351 GLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
LVEEG+ YF SMA +G++PE++HY C+VDLLGR+GLL+EA + + MP+ P+A IW A
Sbjct: 281 KLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGA 340
Query: 410 --AESRL---------------LLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
R+ L+ + HV LANLY+ WD+A VR+ ++ G
Sbjct: 341 LLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGR 400
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE--KVDD 510
K PGCS IE+ V ++F D+S+ + ++ LD + ++K GYVPE E +DD
Sbjct: 401 KKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDD 460
Query: 511 ASHKRT 516
K T
Sbjct: 461 EEDKET 466
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+R S PN +TF + AC + +G I++G S + V N++I MY G
Sbjct: 22 MVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWG 81
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
V+EA VF+ +D+ SWN MI GY G RA ++F+EM ++ D +++ +I+
Sbjct: 82 LVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSER----DVVSWTTIIA 137
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKP 370
G +E F M + G P
Sbjct: 138 GYVQVGCFKEALDLFHEMLQTGPPP 162
>gi|242055533|ref|XP_002456912.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
gi|241928887|gb|EES02032.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
Length = 648
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 215/381 (56%), Gaps = 19/381 (4%)
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+C + G + + GF +V V +S++ Y KCR + A VF+ M VRN V
Sbjct: 228 NACAGMTCLSLGEQFHGFVAKCGFDKDVSVSNSMVDFYGKCRCMGKARLVFDGMGVRNSV 287
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SW +++ A+AQ + +Y R + EP DF +S+L+ C G L GR+ H
Sbjct: 288 SWCSMVVAYAQNGAEEEAFLVYLGARRAGEEPTDFMVSSLLTTCAGLLGLDLGRALHAVA 347
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
R + I VA++L+ MY KCG +++A VF M +++V+WN+MI GYA G A A+
Sbjct: 348 ARSCIDANIFVASALVDMYGKCGGIQDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAWNAL 407
Query: 323 DLFEEM-MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVD 380
+F+EM M + P+ IT + V+++C GGL +EG F +M + G++P ++HY+CVVD
Sbjct: 408 AVFDEMIMGRETAPNYITIVNVLTACSRGGLTKEGYELFQTMKQRFGIEPRIEHYACVVD 467
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAAT 423
LLGRAG+ E+A + I+ MP+ P+ +W AAE L+P+ +
Sbjct: 468 LLGRAGMEEQAYEIIQGMPMRPSISVWGALLGGCKMHGKTELGRVAAEKLFELDPQDSGN 527
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
HV L+N+ A W +A VRK MK+ G+K +PG SWI N+V+ F+A+D ++ SEI
Sbjct: 528 HVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNIVHVFQAKDTTHEMNSEI 587
Query: 484 LPVLDFLVDQMKTLGYVPEVH 504
+L L QM+ GY+P+
Sbjct: 588 QALLAKLKGQMQGAGYMPDTQ 608
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Query: 154 GAPYQCLAIRTGFIAN-VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G LA+R G++ + +V + + +Y K + A ++F+EMP RNVV+W A++
Sbjct: 137 GPQVHALALRFGYLPDDAFVSCAALDMYFKTGRLALARRLFDEMPNRNVVAWNAVMTNAV 196
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + +E Y +R + PN + + +AC G L G H + GF +
Sbjct: 197 LDGRPIETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTCLSLGEQFHGFVAKCGFDKDVS 256
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V+NS++ Y KC + +A VF+ M ++ VSW SM+ YAQ+G A ++ +
Sbjct: 257 VSNSMVDFYGKCRCMGKARLVFDGMGVRNSVSWCSMVVAYAQNGAEEEAFLVYLGARRAG 316
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+P ++++C ++ G+ A+ + + S +VD+ G+ G +++A
Sbjct: 317 EEPTDFMVSSLLTTCAGLLGLDLGRALHAVAARSCIDANIFVASALVDMYGKCGGIQDAE 376
Query: 393 DFIKQMPIYPNAVIWEA 409
+MP N V W A
Sbjct: 377 QVFFEMPQR-NLVTWNA 392
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S+ +T+C + G +A R+ AN++V S+L+ +Y KC I DA +VF EMP
Sbjct: 324 VSSLLTTCAGLLGLDLGRALHAVAARSCIDANIFVASALVDMYGKCGGIQDAEQVFFEMP 383
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
RN+V+W A+I +A L ++ M+ PN T ++L+AC+ G +G
Sbjct: 384 QRNLVTWNAMIGGYAHIGDAWNALAVFDEMIMGRETAPNYITIVNVLTACSRGGLTKEGY 443
Query: 257 SAHCQTI--RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS-WNSMIAGYA 313
QT+ R G I+ ++ + + G E+A + M + +S W +++ G
Sbjct: 444 ELF-QTMKQRFGIEPRIEHYACVVDLLGRAGMEEQAYEIIQGMPMRPSISVWGALLGGCK 502
Query: 314 QHGLA----VRAIDLFE 326
HG V A LFE
Sbjct: 503 MHGKTELGRVAAEKLFE 519
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 6/279 (2%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA-NVYVGSSLITLYSKCRVIIDAYKV 192
D L+ AV + ++R+ R G A+R A ++ + L+ LYSK + A
Sbjct: 12 DPQLLAGAVEAAIASRSPRLGRAAHARALRLLAPALPPFICAHLVNLYSKLDLPGAAAAA 71
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG-- 250
P VVS+TA I+ AQ + L + M L PNDFTF S A +
Sbjct: 72 LAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPR 131
Query: 251 -ALGQGRSAHCQTIRMGFFSYIQ-VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A G H +R G+ V+ + + MY K G + A +F+ M +++V+WN++
Sbjct: 132 CAAAVGPQVHALALRFGYLPDDAFVSCAALDMYFKTGRLALARRLFDEMPNRNVVAWNAV 191
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ G + ++ + + P+ ++ ++C + G+ + +AK G
Sbjct: 192 MTNAVLDGRPIETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTCLSLGEQFHGFVAKCGF 251
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ + +VD G+ + +AR M + N+V W
Sbjct: 252 DKDVSVSNSMVDFYGKCRCMGKARLVFDGMGVR-NSVSW 289
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 222/408 (54%), Gaps = 24/408 (5%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + H L R D + + + + C T ++ G AIR+ F +N+ + ++
Sbjct: 313 VGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTA 371
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++ LYSKC + A VF M RNV++WTA++ AQ + L L+ M+ + N
Sbjct: 372 IVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAAN 431
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF S++ +C G+L +GRS H R+GF I +L+ MY KCG + A +F+
Sbjct: 432 SVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFS 491
Query: 296 NMHG---KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
HG KD+V WNSMI GY HG +A+ ++ +M+++ +KP+ TFL ++S+C H L
Sbjct: 492 --HGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRL 549
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-- 409
VE+G F+SM + H ++P HY+C+VDLL RAG EEA+ I++MP P + EA
Sbjct: 550 VEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALL 609
Query: 410 ---------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
++ L L+ ++ L+N+YA R WD+ +R LM+++GLK
Sbjct: 610 SGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKK 669
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PG S +E N V+ F A D S+ EI L+ L ++T GYVP+
Sbjct: 670 TPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPD 717
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 173/368 (47%), Gaps = 22/368 (5%)
Query: 60 RDSTKTEV-----HLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVV 114
R+S+K + H ++I + L TD + K ++ S + VFDQ +
Sbjct: 39 RESSKNLIWVKSTHAQIITNSLSTD--QFVATKLVKAYSDLRSLEAARYVFDQFFQPKGL 96
Query: 115 DVEKLISMHHDLHRER-------------LKVDASFLSTAVTSCGSTRNIRGGAPYQCLA 161
++ + R R L+VD+ + A+ +C S+ + G A
Sbjct: 97 LCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSA 156
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ G N +VGSS+I+ K I +A +VF+ MP ++VV W +II + Q D+
Sbjct: 157 VEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAF 216
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L+ M S ++P+ T TS++ AC G G L G+ H + +G + I V S + MY
Sbjct: 217 QLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMY 276
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
K G++E A +VF M +++VSWN+MI+G ++GL + DLF +++ D T +
Sbjct: 277 SKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIV 336
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
++ C + GK+ A + L + +VDL + G L++A +M
Sbjct: 337 SLLQGCSQTASLATGKI-LHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMK-D 394
Query: 402 PNAVIWEA 409
N + W A
Sbjct: 395 RNVITWTA 402
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 151/285 (52%), Gaps = 1/285 (0%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++H +K +++ + +CG N++ G + G ++ V +S + +YSK
Sbjct: 221 EMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMG 280
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
I A VF +MP RN+VSW A+I+ + V +L+ + S + T S+L
Sbjct: 281 DIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQ 340
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
C+ + +L G+ H IR F S + ++ +++ +Y KCG++++A +VFN M +++++
Sbjct: 341 GCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVIT 399
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
W +M+ G AQ+G A A+ LF +M ++ + +++TF+ ++ SC H G ++ G+ +
Sbjct: 400 WTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLF 459
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G ++ + + +VD+ + G + A I + V+W +
Sbjct: 460 RLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNS 504
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 18/201 (8%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+S H Q I + VA L+ Y ++E A YVF+ + N+M+ GY Q
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G ++LF M + ++ D+ + + +C E G S + G++
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVG 168
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVR 435
S ++ L + G + EA+ MP + V W + + Y
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMP-NKDVVCWNS-----------------IIGGYVQAG 210
Query: 436 CWDQAARVRKLMKDKGLKTNP 456
C+D A ++ M G+K +P
Sbjct: 211 CFDVAFQLFFEMHGSGIKPSP 231
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 206/360 (57%), Gaps = 20/360 (5%)
Query: 163 RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
+ GF +V V +SLI++YSKC+ + A VF + + VV+W A+I +AQ V+ L
Sbjct: 374 KIGF--DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALN 431
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
L+ M++ ++P+ FT S+++A Q + H IR + V +LI +
Sbjct: 432 LFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHA 491
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG ++ A +F+ M + +++WN+MI GY +G A+DLF EM VKP+ ITFL
Sbjct: 492 KCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLS 551
Query: 343 VISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
VI++C H GLVEEG YF+SM + +GL+P +DHY +VDLLGRAG L++A FI+ MP+
Sbjct: 552 VIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVK 611
Query: 402 PNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVR 444
P + A A+ L+P+ HV LAN+YA WD+ ARVR
Sbjct: 612 PGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVR 671
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
M+ KG++ PGCS +E+ N V+ F + ++ + I L+ L D+MK GYVP+ +
Sbjct: 672 TAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTN 731
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 123/212 (58%)
Query: 146 GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
G ++R G + I GF +N++ ++++ LY+KCR I DAYK+FE MP R++VSW
Sbjct: 153 GENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWN 212
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
++A +AQ +++ M+ + +P+ T S+L A AL GRS H R
Sbjct: 213 TVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRA 272
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
GF + VA +++ Y KCG+V A VF M +++VSWN+MI GYAQ+G + A F
Sbjct: 273 GFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATF 332
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+M+ + V+P ++ +G + +C + G +E G+
Sbjct: 333 LKMLDEGVEPTNVSMMGALHACANLGDLERGR 364
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 5/280 (1%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
K D+ L + + + + +R G A R GF V V ++++ Y KC + A
Sbjct: 240 KPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARL 299
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+ M RNVVSW +I +AQ + + + M + +EP + + L AC G
Sbjct: 300 VFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGD 359
Query: 252 LGQGRSAH--CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
L +GR H ++GF + V NSLISMY KC V+ A VF N+ K +V+WN+MI
Sbjct: 360 LERGRYVHRLLDEKKIGF--DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMI 417
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
GYAQ+G A++LF EM +KPD+ T + VI++ + + K + +
Sbjct: 418 LGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMD 477
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + ++D + G ++ AR M + + W A
Sbjct: 478 KNVFVCTALIDTHAKCGAIQTARKLFDLMQ-ERHVITWNA 516
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
L I+ GF + LI+L+ K I +A +VFE + + V + ++ +A+ +
Sbjct: 66 LIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRD 125
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+ Y MR + P + FT +L + L +GR H I GF S + ++++
Sbjct: 126 AVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVN 185
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
+Y KC +E+A +F M +D+VSWN+++AGYAQ+G A RA+ + +M + KPD+IT
Sbjct: 186 LYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSIT 245
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ V+ + + G+ + G + ++ + ++D + G + AR K M
Sbjct: 246 LVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMS 305
Query: 400 IYPNAVIW 407
N V W
Sbjct: 306 -SRNVVSW 312
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 225/418 (53%), Gaps = 25/418 (5%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D K ++++ + L D + + + + +++R G +R G + ++G
Sbjct: 317 DPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGI 376
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL++LY C A +F+ M ++ VSW A+I+ ++Q + L L+R + + +P
Sbjct: 377 SLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQP 436
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+D S+L AC+ AL G+ HC ++ + VA S I MY K G ++E+ VF
Sbjct: 437 SDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVF 496
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ + KD+ SWN++IA Y HG +I+LFE M K PD TF+G+++ C H GLVE
Sbjct: 497 DGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVE 556
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---- 409
EG YF+ M HG++P+L+HY+CV+D+LGRAG L++A + +MP P++ +W +
Sbjct: 557 EGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSF 616
Query: 410 -------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
AE L LEP+ +V L+NLYAG WD RVR+++KD GL+ +
Sbjct: 617 CRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDA 676
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP-------EVHEEK 507
GCSWIE+ V+ F A D + E+ L +M +GY P +V EEK
Sbjct: 677 GCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEK 734
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 3/209 (1%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C + + G + I+ G + +V+VG++LI +Y K + A KVF MPVRN+
Sbjct: 38 IKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNL 97
Query: 202 VSWTAIIAAFAQEWQVDMCLELY--RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
VSW +II+ F++ C ++ M L P+ T ++L C + G H
Sbjct: 98 VSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIH 157
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+++G ++V NSL+ MY KCG + EA +F+ + K+ VSWN+MI G G
Sbjct: 158 GLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIF 217
Query: 320 RAIDLFEEM-MKQRVKPDAITFLGVISSC 347
A +LF EM M++ ++ + +T L ++ +C
Sbjct: 218 EAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 127/265 (47%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
+E ++V+ + + +C +R +IR GF + V + + Y+KC ++I
Sbjct: 229 QEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLI 288
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A +VF M + V SW A+I AQ L LY M S L P+ FT S+L A
Sbjct: 289 CAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASA 348
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
+L G+ H +R G + SL+S+Y CG A +F+ M K VSWN+
Sbjct: 349 HLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNA 408
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI+GY+Q+GL A+ LF +++ +P I + V+ +C + GK K
Sbjct: 409 MISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKAL 468
Query: 368 LKPELDHYSCVVDLLGRAGLLEEAR 392
L ++ +D+ ++G ++E+R
Sbjct: 469 LMEDVFVACSTIDMYAKSGCIKESR 493
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 124/249 (49%), Gaps = 3/249 (1%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
E L D + L T + C +++ G LA++ G +V V +SL+ +YSKC +
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLT 186
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSAC 246
+A +F++ +N VSW +I + + L+R M+ +E N+ T +IL AC
Sbjct: 187 EAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
L + H +IR GF VAN ++ Y KCG + A VF +M K + SWN
Sbjct: 247 LEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWN 306
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++I G AQ+G +A++L+ +M + PD T ++ + H + GK + +H
Sbjct: 307 ALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRH 366
Query: 367 GLKPELDHY 375
GL E+D +
Sbjct: 367 GL--EIDSF 373
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 3/202 (1%)
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
+A E D +++ ++ ++FTF ++ ACTGS G G H I+MG
Sbjct: 3 VAVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGL 62
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ V N+LI+MY K G V+ AV VF+ M +++VSWNS+I+G++++G + D+ E
Sbjct: 63 LLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVE 122
Query: 328 MM--KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
MM ++ + PD T + V+ C V+ G K GL ++ + +VD+ +
Sbjct: 123 MMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKC 182
Query: 386 GLLEEARDFIKQMPIYPNAVIW 407
G L EA+ + NAV W
Sbjct: 183 GYLTEAQMLFDKNN-RKNAVSW 203
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 136/334 (40%), Positives = 199/334 (59%), Gaps = 19/334 (5%)
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGS 249
KVF+EMP RNV SW +I + + LE + RM+ + PNDFT ++LSAC+
Sbjct: 259 KVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRL 318
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
GAL G+ H +G+ + V N LI MY KCG +E AV VFN + KDI+SWN++I
Sbjct: 319 GALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTII 378
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GL 368
G A HG A A+ +F+ M + +PD +TF+G++S+C H GLV++G +YF SM H +
Sbjct: 379 NGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSI 438
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAES 412
P+++HY C+VDLLGRAGLL++A +FI++MPI P+AVIW E A
Sbjct: 439 VPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQ 498
Query: 413 RLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
RL+ LEP A V ++N+Y + + AR++ M+D G + PGCS IE + V F
Sbjct: 499 RLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFY 558
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
+ D+ ++ I VL L +++ GYVP + +
Sbjct: 559 SLDERHSETESIYRVLKGLTMLLRSHGYVPNLSD 592
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 129/256 (50%), Gaps = 19/256 (7%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SCG +R G C A + GF +N +V +SLI +YSK + DAYKVF EM RNV
Sbjct: 117 IKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNV 176
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN-DFTFTSIL-SACTGSGALGQGRSAH 259
V WTAII + +C ++ R L P D S+L S S + R
Sbjct: 177 VVWTAIINGYI------LCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELF 230
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+ S+ N++++ Y G VE VF+ M +++ SWN +I GY ++GL
Sbjct: 231 DKMPNRDTMSW----NAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFS 286
Query: 320 RAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGK---VYFDSMAKHGLKPELDHY 375
++ F+ M+ + V P+ T + V+S+C G ++ GK VY +S+ G K L
Sbjct: 287 ETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESI---GYKGNLFVG 343
Query: 376 SCVVDLLGRAGLLEEA 391
+ ++D+ + G++E A
Sbjct: 344 NVLIDMYAKCGVIENA 359
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+T S +N Q + G N +V + IT S+ + I A K+F+++P N
Sbjct: 16 ITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNT 75
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
+W A+ + Q + L+ + PN FTF I+ +C + +G HC
Sbjct: 76 ATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCC 135
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
+ GF S VA SLI MY K G VE+A VF MH +++V W ++I GY G V
Sbjct: 136 ATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSG 195
Query: 322 IDLFEEMMKQRVKPDAITFLGVISS 346
LF+ ++ V ++ G I S
Sbjct: 196 RRLFDLAPERDVVMWSVLISGYIES 220
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F ++L +C L Q Q + G VA + I+ + + A +F+ +
Sbjct: 15 FITLLRSCKNYERLHQ---IQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP 71
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ +WN+M GY Q+G + LF E+ + P+ TF +I SC V EG+
Sbjct: 72 QPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEE 131
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
KHG K + ++D+ + G +E+A +M N V+W A
Sbjct: 132 VHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMH-ERNVVVWTA 181
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 237/431 (54%), Gaps = 32/431 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLKVDASFL------------STAVTSCGSTR 149
VFDQ+ + +V +I H++L+ + V L S+ +++C +
Sbjct: 67 VFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMG 126
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+ G + ++ G + YV +SL+ +Y KCR + K+F+ + R+VV+W ++
Sbjct: 127 GLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVM 186
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
F Q + + + +MR + P++ +F+++L + AL QG + H Q I++G+
Sbjct: 187 GFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVK 246
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ + SLI+MY KCG++ +A VF + +++SW +MI+ Y HG A + I+LFE M+
Sbjct: 247 NMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHML 306
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLL 388
+ ++P +TF+ V+S+C H G VEEG +F+SM K H + P +HY+C+VDLLGRAG L
Sbjct: 307 SEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWL 366
Query: 389 EEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLY 431
+EA+ FI+ MP+ P +W EAAE +EP +V LAN+
Sbjct: 367 DEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMC 426
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
++A VR+LM G++ PGCSWI++ N+ + F A D+S++ EI +L+ L
Sbjct: 427 TRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLE 486
Query: 492 DQMKTLGYVPE 502
+K GYV E
Sbjct: 487 KLVKKKGYVAE 497
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 147/291 (50%), Gaps = 3/291 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+ +++ +T + G L + GF AN++VG++L+ +Y+KC + A +VF++MP
Sbjct: 13 FSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP 72
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
RN+VSW ++I F D + +++ ++R + PN+ + +S+LSAC G L GR
Sbjct: 73 ERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGR 132
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H ++ G V NSL+ MY KC +E V +F + +D+V+WN ++ G+ Q+
Sbjct: 133 QVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQND 192
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
A + F M ++ + PD +F V+ S + +G D + K G +
Sbjct: 193 KFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILG 252
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQL 427
++ + + G L +A + + + N + W A S L CA ++L
Sbjct: 253 SLITMYAKCGSLVDAYQVFEGIEDH-NVISWTAMISAYQLHG-CANQVIEL 301
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
MR S PN FTF+SILSA + + G+ H + GF + I V +L+ MY KC +
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVIS 345
+ AV VF+ M +++VSWNSMI G+ + L RA+ +F+++++++ V P+ ++ V+S
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+C + G + G+ + K GL P + ++D+ + +E
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEG 166
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 226/413 (54%), Gaps = 18/413 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D K + + +H++ + D L+T + +CG I G AI++G+ +++V S
Sbjct: 504 DGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 563
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++ +Y KC + A F+ +PV + V+WT +I+ + + + L ++ MR + P
Sbjct: 564 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLP 623
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++FT ++ A + AL QGR H +++ S V SL+ MY KCG++++A +F
Sbjct: 624 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLF 683
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ +I +WN+M+ G AQHG A+ LF++M +KPD +TF+GV+S+C H GLV
Sbjct: 684 KRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVS 743
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---- 409
E Y SM + +G+KPE++HYSC+ D LGRAGL++EA + I M + +A ++
Sbjct: 744 EAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAA 803
Query: 410 -------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A L LEP ++ +V L+N+YA WD+ R +MK +K +P
Sbjct: 804 CRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 863
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
G SWIE+ N ++ F +D+SN + I + ++ +K GYVPE VD
Sbjct: 864 GFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVD 916
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 129/251 (51%), Gaps = 6/251 (2%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
AI+T +A+ +V ++LI YS+ R + +A +F ++V+W A+++ + Q
Sbjct: 450 AIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKT 508
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
LEL+ +M +DFT ++L C A+ QG+ H I+ G+ + V++ ++ M
Sbjct: 509 LELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 568
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KCG++ A + F+++ D V+W ++I+G ++G RA+ +F +M V PD T
Sbjct: 569 YVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTI 628
Query: 341 --LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L SSC +E+G+ + K + + +VD+ + G +++A K++
Sbjct: 629 ATLAKASSCLTA--LEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRI 686
Query: 399 PIYPNAVIWEA 409
+ N W A
Sbjct: 687 EMM-NITAWNA 696
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ-----VDMCLELYR 225
++ ++LI++YSKC + A +VF++MP R++VSW +I+AA+AQ + V L+R
Sbjct: 82 FLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFR 141
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
++R ++ + T + +L C SG + S H ++G VA +L+++Y K G
Sbjct: 142 ILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFG 201
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
V+E +F M +D+V WN M+ Y + G AIDL + P+ IT
Sbjct: 202 KVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%)
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
V ++S I++ + Q L+ + M S LE + TF +L+ +L G+
Sbjct: 284 VSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQ 343
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
HC +++G + V+NSLI+MYCK + A VFNNM +D++SWNS+IAG AQ L
Sbjct: 344 VHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDL 403
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISS 346
V A+ LF ++++ +KPD T V+ +
Sbjct: 404 EVEAVCLFMQLLRCGLKPDHYTMTSVLKA 432
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 116/300 (38%), Gaps = 41/300 (13%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS + C + + + A + G + +V +L+ +Y K + + +FEEMP
Sbjct: 155 LSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMP 214
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA-LGQGR 256
R+VV W ++ A+ + + ++L S L PN+ T +LS +G + GQ +
Sbjct: 215 YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL-RLLSRISGDDSEAGQVK 273
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI-------------- 302
S S I N ++S Y G + F +M D+
Sbjct: 274 SFENGN-DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATA 332
Query: 303 VSWNSMIAGYAQHGLA---------------------VRAIDLFEEMMKQRVKPDAITFL 341
V +S+ G H +A +R I L + + D I++
Sbjct: 333 VRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWN 392
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
VI+ L E F + + GLKP DHY+ + +L A L E KQ+ ++
Sbjct: 393 SVIAGIAQSDLEVEAVCLFMQLLRCGLKP--DHYT-MTSVLKAASSLPEGLSLSKQIHVH 449
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 210/383 (54%), Gaps = 22/383 (5%)
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+I G C I+ GF A + +G+SL+ +Y+KC + D KVF M +++SW +IA
Sbjct: 437 DINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA 496
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ + ++ MR L P++ T IL C+ QG+ H + GF S
Sbjct: 497 SSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFES 556
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ + N+LI MY KCG++E + VF M KD+V+W ++I+ + +G +A+ F++M
Sbjct: 557 NVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDME 616
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLL 388
V PD++ F+ I +C H G+V+EG +FD M + L+P ++HY+CVVDLL R+GLL
Sbjct: 617 LSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLL 676
Query: 389 EEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLY 431
+A +FI MP+ P+A +W A ++ L L + +V ++N+Y
Sbjct: 677 AQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIY 736
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A + WDQ VR MK KGLK PG SWIEI VY FR DKS + ++ +L++LV
Sbjct: 737 ATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLV 796
Query: 492 DQMKTLGYVPE----VHEEKVDD 510
M GYV + +H+ + DD
Sbjct: 797 RLMAKEGYVADLQFALHDVEEDD 819
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 146/276 (52%), Gaps = 5/276 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + ++ ++L+ DA + + SC ++ G A+ GF +++Y+G++LI +
Sbjct: 106 LGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDM 165
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YS+ + +A VFEEM R+ VSW ++I+ + + L++Y R + + P+ FT
Sbjct: 166 YSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTM 225
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S+L AC A+ +G + H ++G + + N L+SMY K + EA VF+ M
Sbjct: 226 SSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAV 285
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
KD V+WN+MI GYAQ G ++ LF +M+ V PD ++ I +C G ++ GK
Sbjct: 286 KDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFV 344
Query: 360 FDSMAKHGLKPELDHYSC--VVDLLGRAGLLEEARD 393
+ G E D +C ++D+ + G L A++
Sbjct: 345 HKYLIGSGF--ECDTVACNILIDMYAKCGDLLAAQE 378
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 166/349 (47%), Gaps = 16/349 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + M+H + D +S+ + +CGS ++ G + + G +V +G+ L
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+++Y K + +A +VF +M V++ V+W +I +AQ + + ++L+ M + + P+
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDM 322
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+ TS + AC SG L G+ H I GF N LI MY KCG++ A VF+
Sbjct: 323 LSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDT 382
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
KD V+WNS+I GY Q G ++ F +MMK KPD++TF+ ++S + +G
Sbjct: 383 TKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQG 441
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
+ + K G + EL + ++D+ + G +++ M + + + W
Sbjct: 442 RGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTV------ 494
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKG--LKTNPGCSWIEI 463
A+ V + G + ++ R LM D+ L P CS + +
Sbjct: 495 ----IASSVHFDDCTVGFQMINE-MRTEGLMPDEATVLGILPMCSLLAV 538
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+++ + +CG + +++ G I +GF + + LI +Y+KC ++ A +VF+
Sbjct: 325 ITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK 384
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ V+W ++I + Q LE ++MM+ +P+ TF +LS + + QGR
Sbjct: 385 CKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRG 443
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
HC I+ GF + + + NSL+ +Y KCG +++ + VF+ M DI+SWN++IA
Sbjct: 444 IHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDD 503
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ EM + + PD T LG++ C + +GK + K G + + +
Sbjct: 504 CTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNA 563
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++++ + G LE K M + V W A
Sbjct: 564 LIEMYSKCGSLENCIKVFKYMK-EKDVVTWTA 594
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM-P 197
S+ + + S +N L I +G +V LI+ Y++ + I + VF + P
Sbjct: 23 SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
NV W +II A L Y MR L+P+ FTF S++++C L G
Sbjct: 83 TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + MGF S + + N+LI MY + +++ A YVF M +D VSWNS+I+GY +G
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+D++ + + PD T V+ +C V+EG + K G+ ++ +
Sbjct: 203 WEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ + + L EAR +M + ++V W
Sbjct: 263 LLSMYFKFERLREARRVFSKMAV-KDSVTW 291
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTR 149
HD N+ SS FD D M +++ E L D + + + C
Sbjct: 486 HDIISWNTVIASSVHFD--------DCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
R G ++GF +NV +G++LI +YSKC + + KVF+ M ++VV+WTA+I+
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
AF + L+ ++ M S + P+ F + + AC+ SG + +G
Sbjct: 598 AFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEG 643
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 214/353 (60%), Gaps = 25/353 (7%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR---NS 230
+SLI+ YSK +I +A+ +F+ MP +N SW A++AA+ Q + L+ M+ N+
Sbjct: 192 TSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNN 251
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+L+ F T++LSACTG GAL QG+ H R G ++ +++ MYCKCG +E+A
Sbjct: 252 VLD--KFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKA 309
Query: 291 VYVFNNMH--GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+ VF+++ + I SWN MI G A HG AI LF+EM +QRV PD ITFL ++++C
Sbjct: 310 LQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACA 369
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLVEEG+ YF M + +G++P ++H+ C+VDLLGRAG++ EAR I +MP+ P+ +
Sbjct: 370 HSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVL 429
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
E + LEP + +V LANLYA W+ AA+VRKLM D+
Sbjct: 430 GTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDR 489
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
G+K PG S IE+ V+ F A ++++ + E+ + +++ +K++GYV +
Sbjct: 490 GVKKAPGFSMIELQGTVHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADT 542
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 45/294 (15%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFEEMPVRNV 201
C S +R Y IR G ++ ++ LI ++ + A K+F+ +P +
Sbjct: 32 CQSMSQLR---QYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDA 88
Query: 202 VSWTAIIAAF--AQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+ II F +Q + L LY M++NS+L PN+FTF S+L AC + G
Sbjct: 89 FLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVL-PNNFTFPSLLIACR---KIQHGMQI 144
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + GF ++ NSLI MY +EEA VF+ + D VSW S+I+GY++ GL
Sbjct: 145 HAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLI 204
Query: 319 VRAIDLFEEMMKQ--------------------------RVKP------DAITFLGVISS 346
A +F+ M ++ R+K D ++S+
Sbjct: 205 DEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSA 264
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
C G +++GK + + ++G++ + + +VD+ + G LE+A +P+
Sbjct: 265 CTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPL 318
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY---VFNNMHGKDIVSWNS 307
++ Q R H Q IR+G S+ + LI+ + + Y +F+++ D +N+
Sbjct: 34 SMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYNT 93
Query: 308 MIAGYAQHGL--AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+I G+ L + L+ M++ V P+ TF ++ +CR ++ G + K
Sbjct: 94 IIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRK---IQHGMQIHAHLFK 150
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G + ++ + LEEAR +P +P++V W
Sbjct: 151 FGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIP-HPDSVSW 191
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 218/380 (57%), Gaps = 18/380 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+T ++ C ++ G + L +N+ V ++++ +Y KC + D VF+ M
Sbjct: 9 LATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMA 68
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+VV W+A+IA +AQ + + LEL+ M+++ ++PND T S+LSAC G++ G
Sbjct: 69 RRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETGER 128
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
G S + VA++L+ MY KCGN+ +A +F+ + +D V+WNSMI G A +G
Sbjct: 129 IGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGF 188
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYS 376
A AI L+ M + VKP+ ITF+G++++C H G VE G +F SM + H + P ++H++
Sbjct: 189 AEDAIALYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEFFRSMRSDHNISPNIEHFA 248
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPE 419
C+VDL R+G L +A +FI +M + PN VIW E A +LL LEP+
Sbjct: 249 CIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPD 308
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+ +V L+N+YA W +A +VRKLMKDK ++ SW+E+ + V++F D S+ R
Sbjct: 309 NSGNYVILSNIYASASRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPR 368
Query: 480 LSEILPVLDFLVDQMKTLGY 499
E+ +D L +GY
Sbjct: 369 SDEVYSTIDGLALLSTWVGY 388
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
M EPB+ T ++LS C G L G S + V+ +++ MY KCG V++
Sbjct: 1 MCEPBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDG 60
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF++M +D+V W++MIAGYAQ+G + A++LFE M ++KP+ +T + V+S+C
Sbjct: 61 RLVFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQL 120
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G VE G+ + GL + S ++ + + G + +AR ++P N V W +
Sbjct: 121 GSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDN-VTWNS 178
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 233/415 (56%), Gaps = 23/415 (5%)
Query: 103 NVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAI 162
V D+P + + +++ LH LK+ S L +++C + + P+ L +
Sbjct: 74 TVLSACADSPSSPLARPLAL--TLHARALKLFPSHL--LLSTCLARFYLASRLPHLALQL 129
Query: 163 -RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
T + +V +++++ + ++ A++VF+ MP + VSWTA+I F + + D +
Sbjct: 130 FDTMPVRSVVTYNTMVSGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAI 189
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+ +R M +EP+ T +++SAC GALG G H +R G ++VANSLI MY
Sbjct: 190 DCFRAMLLDSVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMY 249
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+CG V+ A VF+++ + +VSWNSMI G A +GL AI+LFEEM +Q KPDA+T
Sbjct: 250 ARCGQVKLAAQVFHSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLT 309
Query: 342 GVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
GV+++C H GL E G Y+D M ++G+ ++HY CVVDLLGRAG L+EA ++ MP+
Sbjct: 310 GVLTACSHAGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPM 369
Query: 401 YPNAVIWEA-------------AESRLL----LEPECAATHVQLANLYAGVRCWDQAARV 443
PN V+ A AE + L+P A +V L+N+YA V WD A +V
Sbjct: 370 RPNEVVLGALLAGCRMHGDLDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKV 429
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
R LMK +G+K PG S +EI V+ F + D+S+ + EI +L L +M G
Sbjct: 430 RSLMKARGVKKRPGHSIVEIDGDVHEFVSSDRSHPQAEEIGQMLGLLRHEMAMYG 484
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 38/225 (16%)
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS--MLEPNDFTFTSILSACTGSGALGQGR 256
R+VVSWT+ IA A++ + M +S PND T ++LSAC S + R
Sbjct: 30 RDVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACADSPSSPLAR 89
Query: 257 ----SAHCQTIRMGFFSYIQVA-------------------------------NSLISMY 281
+ H + +++ F S++ ++ N+++S
Sbjct: 90 PLALTLHARALKL-FPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSVVTYNTMVSGL 148
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+ G V+ A VF+ M G D VSW ++I G+ ++G AID F M+ V+PD +T +
Sbjct: 149 MRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDYVTLI 208
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
V+S+C G + G + + GL+ + + ++D+ R G
Sbjct: 209 AVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCG 253
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 220/383 (57%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S+A +CG+ + R G A + G +N V +S+I+++ KC + DA FE +
Sbjct: 376 FSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLS 435
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N+VS+ + + + EL + L + FTF S+LS G+L +G
Sbjct: 436 EKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQ 495
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H Q +++G V N+LISMY KCG+++ A VF+ M ++++SW SMI G+A+HG
Sbjct: 496 IHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGF 555
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A R ++ F +M K+ VKP+ +T++ ++S+C H GLV EG +F+SM + H +KP+++HY+
Sbjct: 556 AERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 615
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPE 419
C+VDLL RAGLL +A +FI MP + ++W AA L +P
Sbjct: 616 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPN 675
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
A ++QL+N+YA W+++ +R+ MK++ L GCSWIE+ + V++F D S+
Sbjct: 676 EPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPN 735
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+I LD+L+ ++K GYVP+
Sbjct: 736 AHQIYDELDWLITEIKRCGYVPD 758
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 9/261 (3%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTG-FIANVYVGSSLITLYSKCR-VIIDAYKVFEEM 196
+ + +C ++ + G ++TG F ++V VG SLI ++ K +AYKVF++M
Sbjct: 170 TAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
NVV+WT +I Q + + M S E + FT +S+ SAC L GR
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGR 289
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKC---GNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
H IR G ++ SL+ MY KC G+V++ VF+ M ++SW ++I GY
Sbjct: 290 QLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYM 347
Query: 314 QH-GLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Q+ LA AI+LF EM+ Q V+P+ TF +C + GK K GL
Sbjct: 348 QNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASN 407
Query: 372 LDHYSCVVDLLGRAGLLEEAR 392
+ V+ + + +E+AR
Sbjct: 408 SSVSNSVISMFVKCDRMEDAR 428
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 20/316 (6%)
Query: 94 GTNSTFGSSNVFDQLLDTPVVDVEKLIS--MHHDLHRERLKV-----------DASFLST 140
G NS + VFD++ + VV +I+ M RE ++ D LS+
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV---IIDAYKVFEEMP 197
++C N+ G AIR+G +V SL+ +Y+KC + D KVF+ M
Sbjct: 275 VFSACAELENLSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQ 332
Query: 198 VRNVVSWTAIIAAFAQEWQVDM-CLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+V+SWTA+I + Q + + L+ M+ +EPN FTF+S AC G
Sbjct: 333 DHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVG 392
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ + G S V+NS+ISM+ KC +E+A F ++ K++VS+N+ + G ++
Sbjct: 393 KQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRN 452
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
A +L E+ ++ + A TF ++S + G + +G+ + K GL
Sbjct: 453 LDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVC 512
Query: 376 SCVVDLLGRAGLLEEA 391
+ ++ + + G ++ A
Sbjct: 513 NALISMYSKCGSIDTA 528
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 8/253 (3%)
Query: 103 NVFDQLL--DTPVVDVEKLISMHHDLHRERLK-VDASFLSTAVTSCGSTRNIRGGAPYQC 159
NV D+L+ D+ +S + R+ ++ +D+ S+ + SC R+ R G
Sbjct: 27 NVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHA 86
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP---VRNVVSWTAIIAAFAQEWQ 216
I + + +SLI+LYSK + A VFE M R+VVSW+A++A F +
Sbjct: 87 RLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGR 146
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF-SYIQVAN 275
++L+ L PND+ +T+++ AC+ S +G GR ++ G F S + V
Sbjct: 147 EFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGC 206
Query: 276 SLISMYCKCGNVEEAVY-VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
SLI M+ K N E Y VF+ M ++V+W MI Q G AI F +M+ +
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE 266
Query: 335 PDAITFLGVISSC 347
D T V S+C
Sbjct: 267 SDKFTLSSVFSAC 279
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 8/221 (3%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
+D E + ++ L V A ++ ++ + ++R G ++ G N V
Sbjct: 453 LDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVC 512
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LI++YSKC I A +VF M RNV+SWT++I FA+ + LE + M ++
Sbjct: 513 NALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVK 572
Query: 234 PNDFTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN+ T+ +ILSAC+ G + +G R + ++ ++ + C+ G + +A
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 293 VFNNMHGK-DIVSWNSMIAGYAQHG------LAVRAIDLFE 326
N M + D++ W + + H LA R I F+
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFD 673
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M R+ + + TF+S+L +C + G+ H + I + NSLIS+Y K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSG 111
Query: 286 NVEEAVYVFNNM--HGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
++ +A VF M GK D+VSW++M+A + +G AI LF E ++ + P+ +
Sbjct: 112 DLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTA 171
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHG 367
VI +C + V G+V + K G
Sbjct: 172 VIRACSNSDFVGVGRVILGFLMKTG 196
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 232/407 (57%), Gaps = 24/407 (5%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
V ++++ ++ E ++ + S + +C + + G ++T VG
Sbjct: 330 VQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVG 389
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++L+++Y++ + +A K F+++ N++S + + E C M + +
Sbjct: 390 NALVSMYAESGCMEEARKAFDQLYETNILSMSPDVET---ERNNASCSSKIEGMDDGV-- 444
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ FTF S+LSA G L +G+ H +++ GF S ++NSL+SMY +CG +E+A
Sbjct: 445 -STFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRA 503
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M +++SW S+I+G A+HG A +A+ +F +M+ VKP+ +T++ V+S+C H GLV
Sbjct: 504 FDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLV 563
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
+EGK +F SM K HGL P ++HY+C+VDLL R+GL+EEAR FI +MP +A++W+
Sbjct: 564 KEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLS 623
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
AA + LEP A +V L+NLYA WD+ AR+R LM+DK L
Sbjct: 624 ACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKE 683
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
G SW+++ N ++ FRA D S+ +I L L+ ++K +GYVP+
Sbjct: 684 TGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPD 730
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 131/246 (53%), Gaps = 13/246 (5%)
Query: 162 IRTGFIA-NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
++TGF +V VG +LI ++++ ++ A +VF+ + R V WT +I + Q
Sbjct: 171 LKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKV 230
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+EL+ M + EP+ ++ +S++SACT G++ G+ H +R+G S V+ L+ M
Sbjct: 231 VELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDM 290
Query: 281 YCKCG---NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI-DLFEEMMKQRVKPD 336
Y K ++E A VF M +++SW ++I+GY Q G+ + LF EM+ + ++P+
Sbjct: 291 YAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPN 350
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV----VDLLGRAGLLEEAR 392
IT+ ++ +C + + G+ + H LK + H + V V + +G +EEAR
Sbjct: 351 HITYSNLLKACANLSDQDSGR----QIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEAR 406
Query: 393 DFIKQM 398
Q+
Sbjct: 407 KAFDQL 412
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 137/285 (48%), Gaps = 11/285 (3%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC---RVIIDAY 190
D +S+ +++C ++R G +A+R G +++ V L+ +Y+K R + A
Sbjct: 245 DGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHAR 304
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEW-QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
KVF+ MP NV+SWTA+I+ + Q Q + + L+R M N + PN T++++L AC
Sbjct: 305 KVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANL 364
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
GR H ++ V N+L+SMY + G +EEA F+ ++ +I+S + +
Sbjct: 365 SDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDV 424
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+ I+ ++ + TF ++S+ GL+ +G+ K G +
Sbjct: 425 ETERNNASCSSKIEGMDDGVS------TFTFASLLSAAASVGLLTKGQKLHALSMKAGFR 478
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ + +V + R G LE+A +M + N + W + S L
Sbjct: 479 SDQGISNSLVSMYARCGYLEDACRAFDEMKDH-NVISWTSIISGL 522
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 134/293 (45%), Gaps = 31/293 (10%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
DA+ L T+ G R G A ++ L + V +SL+T+YSKC + A +VF
Sbjct: 42 DAAKLLTSAARAGDLR--LGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVF 99
Query: 194 EEM-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC------ 246
++M VR++VSWTA+ + A+ L L M L PN FT + AC
Sbjct: 100 DQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELF 159
Query: 247 --TGSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
G LG ++ GF+ + V +LI M+ + G++ A VF+ + + V
Sbjct: 160 RLAGGVVLG-------FVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSV 212
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
W +I Y Q G A + ++LF M+ +PD + +IS+C G V G+
Sbjct: 213 VWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVA 272
Query: 364 AKHGLKPELDHYSCV----VDLLGRAGL---LEEARDFIKQMPIYPNAVIWEA 409
+ GL + SCV VD+ + + +E AR K MP + N + W A
Sbjct: 273 LRLGLVSD----SCVSCGLVDMYAKLKMERSMEHARKVFKTMPRH-NVMSWTA 320
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKCGNVEEAVYVFNNMHG- 299
+L++ +G L GR+ H + +R + VANSL++MY KCG VE A VF+ M G
Sbjct: 46 LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE-EGKV 358
+D+VSW +M + A++G ++ L EM++ ++P+A T +C L G V
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165
Query: 359 YFDSMAKHGLKPELDHYSC-VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLE 417
+ K G C ++D+ R G L A+ + I +V+W +R ++
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGL-IERTSVVWTLLITR-YVQ 223
Query: 418 PECAATHVQL 427
CA+ V+L
Sbjct: 224 AGCASKVVEL 233
>gi|357117671|ref|XP_003560587.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Brachypodium distachyon]
Length = 602
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 213/354 (60%), Gaps = 20/354 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R ++ D + +T+ G+ R R G+ + G +V V SS + +Y+KC +++
Sbjct: 234 RNGVEPDGCTFGSMMTALGNLRRARQGSEAHAQVVTRGLCGSVIVESSTLDMYAKCGMML 293
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+A +VF+EM VRN VSW+A++ + Q + + L L+R M + ++ ++L AC
Sbjct: 294 EARRVFDEMQVRNAVSWSALLGGYCQNAEYEKVLVLFRQMDKEY--DDSYSLGTVLRACA 351
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G ++ G+ HC+ +R G + + V ++L+ +Y KCG V+ A VF ++ ++WN+
Sbjct: 352 GLSSVKPGKEIHCRFLRNGGWRDVVVESALVDLYAKCGAVDYACRVFEASSVRNTITWNA 411
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-H 366
MI G+AQ+G A RAI+LF +M+++ +PD I+F+GV+ +C H G+VE+G+ YF+SM+K +
Sbjct: 412 MIGGFAQNGHAERAINLFNQMVREGARPDYISFIGVLFACSHNGMVEQGRNYFNSMSKDY 471
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----------------- 409
G+ P ++HY+C+VDLL R LLEEA D I + P ++ +W A
Sbjct: 472 GIAPGIEHYNCIVDLLSRVELLEEAEDLINKSPFSNDSSLWAAILGASATQSNPDVAERV 531
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
A+ + LEP+ +++ L N+Y V W+ A+ +R+LMK + +K +PG SWI++
Sbjct: 532 AKKMMELEPQYHLSYILLENVYRTVGRWEDASEIRRLMKSRKVKKDPGMSWIDV 585
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 137/278 (49%), Gaps = 6/278 (2%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+A LS AV +C R+ GA + + G+ + V S+L+ +Y DA K F
Sbjct: 138 NAHALSAAVKACAVLRDRNVGACVHGVILVRGYADDDIVLSALVDMYGHTASPGDARKAF 197
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSMLEPNDFTFTSILSACTGSGA 251
EEM + + +T++I+AF + + + +R M RN +EP+ TF S+++A
Sbjct: 198 EEMCTPDGICYTSLISAFVRNDWFEEAVRWFRTMVTRNG-VEPDGCTFGSMMTALGNLRR 256
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
QG AH Q + G + V +S + MY KCG + EA VF+ M ++ VSW++++ G
Sbjct: 257 ARQGSEAHAQVVTRGLCGSVIVESSTLDMYAKCGMMLEARRVFDEMQVRNAVSWSALLGG 316
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Y Q+ + + LF +M K+ D+ + V+ +C V+ GK ++G +
Sbjct: 317 YCQNAEYEKVLVLFRQMDKE--YDDSYSLGTVLRACAGLSSVKPGKEIHCRFLRNGGWRD 374
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S +VDL + G ++ A + + N + W A
Sbjct: 375 VVVESALVDLYAKCGAVDYACRVFEASSVR-NTITWNA 411
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
Query: 171 YVGSSLITLYSKC-RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
YV ++L+ Y + R + A + F+++P R+VV+ ++I+AAF + L+ R M
Sbjct: 71 YVANALLAFYVRLPRHLPYALRAFDDLPHRDVVAHSSILAAFLRAGLPRRALQSLRSMLA 130
Query: 230 SM--LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ PN ++ + AC G H + G+ V ++L+ MY +
Sbjct: 131 GADGVFPNAHALSAAVKACAVLRDRNVGACVHGVILVRGYADDDIVLSALVDMYGHTASP 190
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISS 346
+A F M D + + S+I+ + ++ A+ F M+ + V+PD TF ++++
Sbjct: 191 GDARKAFEEMCTPDGICYTSLISAFVRNDWFEEAVRWFRTMVTRNGVEPDGCTFGSMMTA 250
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
+ +G + GL + S +D+ + G++ EAR +M + NAV
Sbjct: 251 LGNLRRARQGSEAHAQVVTRGLCGSVIVESSTLDMYAKCGMMLEARRVFDEMQVR-NAVS 309
Query: 407 WEA 409
W A
Sbjct: 310 WSA 312
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 231/402 (57%), Gaps = 22/402 (5%)
Query: 125 DLHRERLKVDASFLSTAVT-SCGSTRNIRGGAPYQCLAI-----RTGFIANVYVGSSLIT 178
D+ + RL D V+ + + ++ G P +C+ + +G ++ S+++
Sbjct: 205 DIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLN 264
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
Y +C + DA +F ++P ++ + WT +I +AQ + + L+ M ++P+ +T
Sbjct: 265 AYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYT 324
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+S++S+C +L G+ H + + MG + + V+++L+ MYCKCG +A +F M
Sbjct: 325 ISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMP 384
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++++WN+MI GYAQ+G + A+ L+E M ++ KPD ITF+GV+S+C + +V+EG+
Sbjct: 385 IRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQK 444
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
YFDS+++HG+ P LDHY+C++ LLGR+G +++A D I+ MP PN IW
Sbjct: 445 YFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGD 504
Query: 408 ----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIE 462
E A S L L+P A ++ L+NLYA W A VR LMK+K K SW+E
Sbjct: 505 LKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVE 564
Query: 463 IMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
+ N V+RF +ED + + +I L+ L+ ++ +GY P+ +
Sbjct: 565 VGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTN 606
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 106/197 (53%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+VY ++L++ Y+K ++ + + VF++MP R+ VS+ +IA FA L++ M+
Sbjct: 88 DVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+P ++ + L AC+ L G+ H + + V N++ MY KCG+++
Sbjct: 148 EDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDID 207
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A +F+ M K++VSWN MI+GY + G I LF EM +KPD +T V+++
Sbjct: 208 KARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYF 267
Query: 349 HGGLVEEGKVYFDSMAK 365
G V++ + F + K
Sbjct: 268 RCGRVDDARNLFIKLPK 284
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 36/270 (13%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
A+ +C ++R G + N +V +++ +Y+KC I A +F+ M +
Sbjct: 160 NALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDK 219
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NVVSW +I+ + + + C+ L+ M+ S L+P+ T +++L+A
Sbjct: 220 NVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA-------------- 265
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
Y +CG V++A +F + KD + W +MI GYAQ+G
Sbjct: 266 ---------------------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREE 304
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A LF +M+++ VKPD+ T ++SSC + G+V + G+ + S +V
Sbjct: 305 DAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALV 364
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
D+ + G+ +AR + MPI N + W A
Sbjct: 365 DMYCKCGVTLDARVIFETMPI-RNVITWNA 393
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
+ N L+ +Y K G + +A VF+NM +D+ SWN++++ YA+ G+ +F++M +
Sbjct: 60 IHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYR- 118
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
D++++ +I+ G + M + G +P YS V L + LL+
Sbjct: 119 ---DSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPT--QYSHVNALQACSQLLD 170
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 210/378 (55%), Gaps = 23/378 (6%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C + G Q ++ G NVYV +++I Y C+ I DA ++F+EM R V
Sbjct: 767 LKACAAISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTV 826
Query: 202 VSWTAIIAA-FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
VSW A+++A EW D L+ MR S +P++ T +LSAC+ G L GR H
Sbjct: 827 VSWNAVLSACVDNEWLND-SFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHS 885
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
Q I G ++ +L+ MY KCG V EA VF+ M +++ +W++MI G AQHG A
Sbjct: 886 QVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKE 945
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVV 379
A++LF +M + + P+ +TFLGV+ +C H GLV++G +F M HG++P + HY +V
Sbjct: 946 ALELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMV 1005
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIW-------------------EAAESRLL-LEPE 419
D+L RAG L+EA +FI MP+ + V+W + RLL LEP
Sbjct: 1006 DILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELEPR 1065
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+ V +AN+YA V WD+AA VR+ MKD GLK G S IE+ ++RF + D
Sbjct: 1066 RSGNFVMVANMYAEVGKWDKAANVRRTMKDTGLKKMAGESCIEVGGSIHRFFSGDDPQLD 1125
Query: 480 LSEILPVLDFLVDQMKTL 497
++L +LD L MKT+
Sbjct: 1126 CEDVLQLLDGLNLHMKTV 1143
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + +++C N+ G I G + N +G++L+ +Y+KC + +A VF
Sbjct: 860 DETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVF 919
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
M RNV +W+A+I AQ LEL+ M+ S + PN TF +L AC+ +G +
Sbjct: 920 HRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFLGVLCACSHAGLVD 979
Query: 254 QG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV-YVFNNMHGKDIVSWNSMIAG 311
G R H G + +++ + + G ++EA ++ N D V W ++++
Sbjct: 980 DGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSA 1039
Query: 312 YAQHGL 317
HG+
Sbjct: 1040 CTIHGI 1045
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 24/271 (8%)
Query: 156 PYQCLAIRT--------------GFIANV---YVGSSLITLYSKCRVIIDAYKVFEEMPV 198
P QCL++ GFIA + SS + + RV++ + E
Sbjct: 669 PQQCLSLLNLCSSMKHLFQIRGHGFIAGPLLRFCASSPLGNLNHARVLLSGSEKSE---- 724
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
V SW +I ++A + Y MR+ + P+ TF +L AC A +GR
Sbjct: 725 --VSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAAISAFNEGRKI 782
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
++ G + V N++I Y C + +A +F+ M + +VSWN++++ +
Sbjct: 783 QVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWL 842
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+ LF +M PD T + ++S+C G + G+ + + G+ + +
Sbjct: 843 NDSFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTAL 902
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
VD+ + G + EA +M + N W A
Sbjct: 903 VDMYAKCGAVCEASLVFHRM-LERNVWTWSA 932
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 226/399 (56%), Gaps = 18/399 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + +++ +++H K + +C + G +++ G+ +Y +
Sbjct: 295 DSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMT 354
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC ++DA K F+ + ++V WT++I+ +AQ + + L LY M+ + P
Sbjct: 355 ALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMP 414
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++ T S+L AC+ AL QG+ H QTI+ GF + + ++L +MY KCG++E+ VF
Sbjct: 415 HELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVF 474
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +DI++WN+MI+G +Q+G ++A++LFEE+ KPD +TF+ V+S+C H GLVE
Sbjct: 475 RRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVE 534
Query: 355 EGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
GKVYF M + G+ P ++HY+C+VD+L RAG L E ++FI+ I +W
Sbjct: 535 RGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGA 594
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A E + L + ++ ++ L+++Y + D RVR+LMK +G+ P
Sbjct: 595 CRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEP 654
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
GCSWIE+ + V+ F D+ + ++ +I L L D MK
Sbjct: 655 GCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMK 693
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 151/273 (55%), Gaps = 7/273 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S T+ S+ GG LAI+T +V+VGSSLI +Y K ++DA KVF+ +P
Sbjct: 116 FSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIP 175
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN VSW II+ +A E EL+ +MR + F +TS+LSA T + G+
Sbjct: 176 ERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQ 235
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
HC ++ G S V N+L++MY KCG +++A+ F KD ++W++MI GYAQ G
Sbjct: 236 IHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGD 295
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ A++LF M KP TF+GVI++C G +EEGK K G + ++ +
Sbjct: 296 SHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTA 355
Query: 378 VVDLLGRAGLLEEAR---DFIKQMPIYPNAVIW 407
+VD+ + G L +AR D++K+ P+ V+W
Sbjct: 356 LVDMYAKCGSLVDARKGFDYLKE----PDIVLW 384
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 150/279 (53%), Gaps = 2/279 (0%)
Query: 137 FLSTAVTSCGSTRN-IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
F+ T+V S + + + G CLA++ G ++ VG++L+T+Y KC + DA K FE
Sbjct: 215 FIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFEL 274
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
++ ++W+A+I +AQ L L+ M + +P++FTF +++AC+ GAL +G
Sbjct: 275 SGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEG 334
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H +++ G+ I +L+ MY KCG++ +A F+ + DIV W SMI+GYAQ+
Sbjct: 335 KQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQN 394
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G A+ L+ M +R+ P +T V+ +C +E+GK K+G E+
Sbjct: 395 GENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIG 454
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
S + + + G LE+ ++MP + + W A S L
Sbjct: 455 SALSTMYAKCGSLEDGNLVFRRMP-SRDIMTWNAMISGL 492
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 132/249 (53%), Gaps = 2/249 (0%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C ++++ G +RTG ++VY+ +SL+ LY+KC I+ A VFE + ++VVSW
Sbjct: 20 CTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSW 79
Query: 205 TAIIAAFAQEWQV--DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
+I ++Q+ V +EL++ MR PN TF+ + +A + S G AH
Sbjct: 80 NCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALA 139
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
I+ F + V +SLI+MYCK G + +A VF+ + ++ VSW ++I+GYA +A A
Sbjct: 140 IKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAW 199
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
+LF M ++ D + V+S+ LV GK K+GL + +V +
Sbjct: 200 ELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMY 259
Query: 383 GRAGLLEEA 391
G+ G L++A
Sbjct: 260 GKCGCLDDA 268
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+L P +F +L CT L +G++ H Q +R G FS + + NSL+++Y KCG++ +A
Sbjct: 5 LLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKA 64
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA--IDLFEEMMKQRVKPDAITFLGVISSCR 348
VF ++ KD+VSWN +I GY+Q G + ++LF+ M + P+ TF GV ++
Sbjct: 65 KLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTA-- 122
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHY------SCVVDLLGRAGLLEEARDFIKQMPIYP 402
F + H L + ++ S ++++ + G + +AR +P
Sbjct: 123 ----ASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIP-ER 177
Query: 403 NAVIWEAAESRLLLE 417
N V W S +E
Sbjct: 178 NTVSWATIISGYAME 192
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 232/426 (54%), Gaps = 50/426 (11%)
Query: 140 TAVTSCG-STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ +++CG TR++ G + +G + ++ V ++L+ +Y++C + A+KVF+ M V
Sbjct: 127 SVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQV 186
Query: 199 RNVVSWTAIIAAFAQEWQVDMC-------------------------------LELYRMM 227
R+VVSWT++++ A+ QVD LE++R M
Sbjct: 187 RSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREM 246
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ S + ++FT S+++AC GAL G R G V N+LI MY KCG++
Sbjct: 247 QYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSI 306
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
E A+ VF MH +D +W ++I G A +G AI++F M++ PD +TF+GV+++C
Sbjct: 307 ERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTAC 366
Query: 348 RHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
H GLV++G+ +F SM + + + P + HY C++DLLGRAG + EA D I QMP+ PN+ I
Sbjct: 367 THAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTI 426
Query: 407 WEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
W AE L L+PE + ++ L+N+YA W+ R+R + +
Sbjct: 427 WGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIME 486
Query: 450 KGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
KG+K PGCS IE+ +++ F A D+S+ EI L+ ++ + +GY P+V E V+
Sbjct: 487 KGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVE 546
Query: 510 DASHKR 515
A ++
Sbjct: 547 VAEKEK 552
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 118/269 (43%), Gaps = 34/269 (12%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+R G N +V SSL+ Y+ A + E V+W A+I+ + +
Sbjct: 50 VRLGMGRNAHVASSLVAAYTAGGDGAAARALVGE--CDTPVAWNALISGHNRGGRFGESC 107
Query: 222 ELYRMMRNSMLEPNDFTFTSILSAC-TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+ M + P T+ S+LSAC G+ + G H + + G ++V N+L+ M
Sbjct: 108 GSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDM 167
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG------------------------ 316
Y +C ++ A VF+ M + +VSW S+++G A+ G
Sbjct: 168 YAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMI 227
Query: 317 ----LAVR---AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
A R A+++F EM V D T + VI++C G +E G+ M++ G+K
Sbjct: 228 DGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIK 287
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ + ++D+ + G +E A D K M
Sbjct: 288 MDAFVGNALIDMYSKCGSIERALDVFKGM 316
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 221/394 (56%), Gaps = 53/394 (13%)
Query: 163 RTGFIA-NVYVGSSLITLYSKCRVIIDAYKVFEEM------------------------- 196
RTG +A + +V SSL+ LY C + DA VF+EM
Sbjct: 105 RTGHVASDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHAR 164
Query: 197 ------PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
P RNVVSWT +I +AQ + + +E++R M+ +E + S+L+AC G
Sbjct: 165 ELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLG 224
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
A+ G H +R G I + NS+I MY KCG +E+AV VF M K +V+W ++IA
Sbjct: 225 AVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIA 284
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLK 369
G+A HGL ++A+++F M ++ + P+A+TFL ++S+C H GL + G+ YF+ M +++ +K
Sbjct: 285 GFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIK 344
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-------------AESRLL- 415
P ++HY C+VDLLGRAG L+EA+D +K MP+ NA IW A E LL
Sbjct: 345 PRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLH 404
Query: 416 ---LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
LEP + ++ L+N++A W +++RK M+++GL+ PG S IE+ +V+ F +
Sbjct: 405 LIELEPNNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDGMVHEFTS 464
Query: 473 EDKSNTRLSEILPVLDFLVDQMKTLGYV---PEV 503
D S+ + I VL + MK++G+ PEV
Sbjct: 465 RDWSHPFIHTICEVLCEIDTNMKSVGFASVFPEV 498
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + + + E ++ D L + + +CG + G +R G + + +S+
Sbjct: 192 EKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSI 251
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y KC I A +VFE M ++VV+WT +IA FA +E++ M + PN
Sbjct: 252 IDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFCRMERENMAPNA 311
Query: 237 FTFTSILSACTGSGALGQGR-SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF +ILSAC+ G GR + + ++ ++ + + G ++EA +
Sbjct: 312 VTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYGCMVDLLGRAGCLKEAQDLVK 371
Query: 296 NMHGK-DIVSWNSMIAGYAQHG 316
NM K + W +++A HG
Sbjct: 372 NMPLKANAAIWGALLAAARTHG 393
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 215/386 (55%), Gaps = 24/386 (6%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC + R G L ++G ++ YV + LI +YS C AYKVF +M R+V
Sbjct: 103 LKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDV 162
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH-- 259
VSWT++I F + + + L+ M +EPN+ T S+L AC +GA+G GR
Sbjct: 163 VSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGV 222
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+ ++G + ++ A LI MY KCG++ A VF+ + KD+ +W +MI+G A HGL
Sbjct: 223 IEERKIGLEANVRTA--LIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCE 280
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCV 378
A+ LF++M ++PD T V+S+CR+ G EG YF+SM K+G+KP + HY C+
Sbjct: 281 EAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCM 340
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLL--EPE 419
VDLL R G L+EA +FI++MPI P+ V+W + + R LL + +
Sbjct: 341 VDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSD 400
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
++V L N+YA W A++R+LM KGL PGCS IE+ +V+ F A D +
Sbjct: 401 DCGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIE 460
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHE 505
+I LD + +++K GY P++ E
Sbjct: 461 AEKIYAKLDEVEERLKAEGYHPKLSE 486
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 3/228 (1%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSMLEPNDFTFTSILSAC 246
A+ + + +N +I A++Q L L+ M + + P+ FT+ +L +C
Sbjct: 47 AHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLKSC 106
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G+ H + G S V+N LI MY CG A VF M +D+VSW
Sbjct: 107 ARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWT 166
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
SMI G+ A+ AI LFEEM++ V+P+ T + V+ +C G V G+ + +
Sbjct: 167 SMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEER 226
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ E + + ++D+ + G + AR + + + W A S L
Sbjct: 227 KIGLEANVRTALIDMYAKCGSIGSARKVFDGI-VNKDVFAWTAMISGL 273
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 221/390 (56%), Gaps = 20/390 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
K + + + ++ +D L A+ +C T ++ G L + GF N Y+GSSL
Sbjct: 178 NKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSL 237
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I++Y+KC + DA ++F+ MP RN V WT++I+ + Q Q ++L+R M+ + ++ +D
Sbjct: 238 ISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIKLFRDMQIAGVKVDD 297
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T ++++S+C GAL GR H G I V NSLI MY KCG++++A +F
Sbjct: 298 ATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYSKCGDIKKAYDIFCG 357
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEE 355
M +D SW ++I G+A +GL+ A+DLF +M ++ V P+ ITFLGV++SC HGGLVE+
Sbjct: 358 MVKRDNFSW-TVIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFLGVLTSCSHGGLVEQ 416
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----- 409
G +F M+ +G+ P ++HY C+VDLLGRA LL EA FIK+MPI P+AV+W +
Sbjct: 417 GYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPIAPDAVMWRSLLFAC 476
Query: 410 ------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AE +LEP V L+ +YA W A +VR + PG
Sbjct: 477 RTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSRWVDANKVRTGIYSGRKTKQPG 536
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
CS+IE+ V+ F A D+S+ I L
Sbjct: 537 CSFIEVDGCVHEFFAGDESHFETEAIYSTL 566
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 133/270 (49%), Gaps = 2/270 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+ +D LS A+++ ++ GA L+++ G ++ +V ++LI +YS C A
Sbjct: 89 MPIDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTAR 148
Query: 191 KVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
V + P + VSW IIA + + L+ + M + +D T + L AC
Sbjct: 149 SVLDSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACAR 208
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ + G+ H + GF + +SLISMY KCG VE+A +F+ M ++ V W SM
Sbjct: 209 TCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSM 268
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I+GY Q G + AI LF +M VK D T V+SSC G ++ G+ HGL
Sbjct: 269 ISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGL 328
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++ + ++D+ + G +++A D M
Sbjct: 329 GKDISVKNSLIDMYSKCGDIKKAYDIFCGM 358
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 3/177 (1%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++++ ++ LS ++ G H ++++G S V N+LI+MY C A V
Sbjct: 92 DNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVL 151
Query: 295 NNM--HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
++ D VSWN++IAGY GL +A+ F +M K +V D +T L + +C +
Sbjct: 152 DSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCM 211
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ GK+ + +G + S ++ + + G +E+AR MP NAV W +
Sbjct: 212 MKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDR-NAVCWTS 267
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 209/367 (56%), Gaps = 23/367 (6%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N ++++T Y++C I A +F+EMP R+ +SW A+I+ +AQ Q + L L+ M+
Sbjct: 338 NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMK 397
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N LS+C AL G+ H + ++ GF + N+L++MY KCG++E
Sbjct: 398 RDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIE 457
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA VF ++ KDIVSWN+MIAGYA+HG A+ LFE MK +KPD +T +GV+S+C
Sbjct: 458 EAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES-MKMTIKPDDVTLVGVLSACS 516
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H G V++G YF+SM + +G+ HY+C++DLLGRAG L+EA + +K MP YP+A W
Sbjct: 517 HTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATW 576
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
+AAE +EP+ + +V L+NLYA W + +R M+DK
Sbjct: 577 GALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDK 636
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE----VHEE 506
G+K PG SW+EI N + F D S+ I L+ L ++K G+V +H+
Sbjct: 637 GVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDV 696
Query: 507 KVDDASH 513
+ ++ H
Sbjct: 697 EEEEKEH 703
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 147/305 (48%), Gaps = 23/305 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDLHR----ERL---KVDASFLSTAVTSCGSTRNIR---G 153
+FDQ+L + L+S + R RL K+D +S G R R
Sbjct: 175 IFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDA 234
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
+ + + +R N+ +IT Y++ ++ +A ++FEE+P+R+V +WTA+++ F Q
Sbjct: 235 RSLFDRMPVRDKISWNI-----MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQ 289
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+D ++ M E N+ ++ ++++ S + + R Q S+
Sbjct: 290 NGMLDEATRIFE----EMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSW--- 342
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
N++++ Y +CGN+++A +F+ M +D +SW +MI+GYAQ G + A+ LF +M +
Sbjct: 343 -NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGG 401
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+ +SSC +E GK + K G + + ++ + G+ G +EEA D
Sbjct: 402 ILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFD 461
Query: 394 FIKQM 398
+ +
Sbjct: 462 VFEDI 466
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 20/226 (8%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+++ Y K + A +F +MP ++VVSW A+++ FAQ + +E R + + ML N
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQ----NGFVEEARKIFDQMLVKN 183
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+ ++ +LSA +G + R + S+ N L+ Y + +++A +F+
Sbjct: 184 EISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSW----NCLMGGYVRKKRLDDARSLFD 239
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M +D +SWN MI GYAQ+GL A LFEE+ + D + ++S G+++E
Sbjct: 240 RMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGMLDE 295
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLG--RAGLLEEARDFIKQMP 399
F+ M PE + S + G ++ +E+AR+ QMP
Sbjct: 296 ATRIFEEM------PEKNEVSWNAMIAGYVQSQQIEKARELFDQMP 335
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 20/237 (8%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
++V W I+A+ ++ Q + L ++ N M + T+ +++S + R
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVF----NGMRRRSTVTYNAMISGYLSNNKFDCARKVF 114
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+ S+ N ++S Y K GN+ A +FN M KD+VSWN+M++G+AQ+G
Sbjct: 115 EKMPDRDLISW----NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A +F++M+ + + I++ G++S+ G +E+ + FDS + E+ ++C++
Sbjct: 171 EARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSK----MDWEIVSWNCLM 222
Query: 380 DLLGRAGLLEEARDFIKQMPIYP----NAVIWEAAESRLLLEPECAATHVQLANLYA 432
R L++AR +MP+ N +I A++ LL E + + +++A
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFA 279
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + R+ ++ S L+ A++SC + G ++ GF G++L
Sbjct: 387 EEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNAL 446
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC I +A+ VFE++ +++VSW +IA +A+ L L+ M+ + ++P+D
Sbjct: 447 LAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDD 505
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS-----LISMYCKCGNVEEAV 291
T +LSAC+ +G + +G + + +Y AN+ +I + + G ++EA+
Sbjct: 506 VTLVGVLSACSHTGFVDKG----MEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEAL 561
Query: 292 YVFNNM-HGKDIVSWNSMIAGYAQHG 316
+ +M D +W +++ HG
Sbjct: 562 NLMKSMPFYPDAATWGALLGASRIHG 587
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A KVFE+MP R+++SW +++ + + + L R + N M E + ++ ++LS
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVK----NGNLSAARALFNQMPEKDVVSWNAMLSGFAQ 165
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+G + + R Q + S+ N L+S Y + G +E+A +F++ +IVSWN +
Sbjct: 166 NGFVEEARKIFDQMLVKNEISW----NGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCL 221
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ GY + A LF+ M + D I++ +I+ GL+ E + F+ +
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVR----DKISWNIMITGYAQNGLLSEARRLFEELPIR-- 275
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ ++ +V + G+L+EA ++MP N V W A
Sbjct: 276 --DVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNA 313
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 210/383 (54%), Gaps = 22/383 (5%)
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+I G C I+ GF A + +G+SL+ +Y+KC + D KVF M +++SW +IA
Sbjct: 437 DINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA 496
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ + ++ MR L P++ T IL C+ QG+ H + GF S
Sbjct: 497 SSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFES 556
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ + N+LI MY KCG++E + VF M KD+V+W ++I+ + +G +A+ F++M
Sbjct: 557 NVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDME 616
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLL 388
V PD++ F+ I +C H G+V+EG +FD M + L+P ++HY+CVVDLL R+GLL
Sbjct: 617 LSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLL 676
Query: 389 EEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLY 431
+A +FI MP+ P+A +W A ++ L L + +V ++N+Y
Sbjct: 677 AQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIY 736
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A + WDQ VR MK KGLK PG SWIEI VY FR DKS + ++ +L++LV
Sbjct: 737 ATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLV 796
Query: 492 DQMKTLGYVPE----VHEEKVDD 510
M GYV + +H+ + DD
Sbjct: 797 RLMAKEGYVADLQFALHDVEEDD 819
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 151/292 (51%), Gaps = 6/292 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + ++ ++L+ DA + + SC ++ G A+ GF +++Y+G++LI +
Sbjct: 106 LGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDM 165
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YS+ + +A VFEEM R+ VSW ++I+ + + L++Y R + + P+ FT
Sbjct: 166 YSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTM 225
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S+L AC A+ +G + H ++G + + N L+SMY K + EA VF+ M
Sbjct: 226 SSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAV 285
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
KD V+WN+MI GYAQ G ++ LF +M+ V PD ++ I +C G ++ GK
Sbjct: 286 KDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFV 344
Query: 360 FDSMAKHGLKPELDHYSC--VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G E D +C ++D+ + G L A++ ++V W +
Sbjct: 345 HKYLIGSGF--ECDTVACNILIDMYAKCGDLLAAQEVFDTTKC-KDSVTWNS 393
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 142/274 (51%), Gaps = 2/274 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + M+H + D +S+ + +CGS ++ G + + G +V +G+ L
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+++Y K + +A +VF +M V++ V+W +I +AQ + + ++L+ M + + P+
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDM 322
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+ TS + AC SG L G+ H I GF N LI MY KCG++ A VF+
Sbjct: 323 LSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDT 382
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
KD V+WNS+I GY Q G ++ F +MMK KPD++TF+ ++S + +G
Sbjct: 383 TKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQG 441
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+ + K G + EL + ++D+ + G +++
Sbjct: 442 RGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDD 475
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+++ + +CG + +++ G I +GF + + LI +Y+KC ++ A +VF+
Sbjct: 325 ITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK 384
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ V+W ++I + Q LE ++MM+ +P+ TF +LS + + QGR
Sbjct: 385 CKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRG 443
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
HC I+ GF + + + NSL+ +Y KCG +++ + VF+ M DI+SWN++IA
Sbjct: 444 IHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDD 503
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ EM + + PD T LG++ C + +GK + K G + + +
Sbjct: 504 CTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNA 563
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++++ + G LE K M + V W A
Sbjct: 564 LIEMYSKCGSLENCIKVFKYMK-EKDVVTWTA 594
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM-P 197
S+ + + S +N L I +G +V LI+ Y++ + I + VF + P
Sbjct: 23 SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
NV W +II A L Y MR L+P+ FTF S++++C L G
Sbjct: 83 TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + MGF S + + N+LI MY + +++ A YVF M +D VSWNS+I+GY +G
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+D++ + + PD T V+ +C V+EG + K G+ ++ +
Sbjct: 203 WEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ + + L EAR +M + ++V W
Sbjct: 263 LLSMYFKFERLREARRVFSKMAV-KDSVTW 291
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTR 149
HD N+ SS FD D M +++ E L D + + + C
Sbjct: 486 HDIISWNTVIASSVHFD--------DCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
R G ++GF +NV +G++LI +YSKC + + KVF+ M ++VV+WTA+I+
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
AF + L+ ++ M S + P+ F + + AC+ SG + +G
Sbjct: 598 AFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEG 643
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 226/408 (55%), Gaps = 21/408 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R K + L+T +TSC ++I+ L ++T F ++++VGSSL+ +Y K I
Sbjct: 135 RAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQ 194
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+A KVF+ +P R+ VS TAII+ +AQ D L+L+R + +S ++ N TFT++L++ +
Sbjct: 195 EARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLS 254
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G +L G+ H +R +I + NSLI MY KCG + + VF+NM + +SWN+
Sbjct: 255 GLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNA 314
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-H 366
M+ GY +HG+ + LF M ++ VKPD++T L V+S C HGGLV+EG FD + K
Sbjct: 315 MLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQ 373
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAA 410
+ HY CV+DLLGR+G L++A D I+ MP P IW E
Sbjct: 374 NAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVV 433
Query: 411 ESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
+LL +EP A +V L+N+YA W RVRKLM + + P SWI + V++
Sbjct: 434 AQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHT 493
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH--EEKVDDASHKR 515
F + ++ + R +I + + +K G+VP++ VDD +R
Sbjct: 494 FHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKER 541
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 149/284 (52%), Gaps = 15/284 (5%)
Query: 134 DASF--LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
DA F A+T+C + + G ++ + VY+ + LI LY +C + DA
Sbjct: 38 DARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARN 97
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
V + MP RNVVSWTA+I+ ++Q + LEL+ M + + N+FT ++L++C +
Sbjct: 98 VLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQS 157
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ Q H ++ F S++ V +SL+ MY K GN++EA VF+ + +D VS ++I+G
Sbjct: 158 IQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISG 217
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG--LK 369
YAQ GL A+DLF ++ ++ + +TF +++S + GK HG L+
Sbjct: 218 YAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGK------QVHGLILR 271
Query: 370 PELDHY----SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
EL + + ++D+ + G L +R MP +A+ W A
Sbjct: 272 KELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMP-QRSAISWNA 314
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 221/388 (56%), Gaps = 28/388 (7%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D +++ +++C S + G LA RTG I V V +SLI +YSKC+ I A ++F
Sbjct: 336 DEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIF 395
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE--PNDFTFTSILSACTGSGA 251
++P ++V+SWT++I + C E R +L+ PN T S LSAC GA
Sbjct: 396 HQIPDKDVISWTSVINGLRIN---NRCFEALIFFRKMILKSKPNSVTLISALSACARVGA 452
Query: 252 LGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
L G+ H ++ MGF ++ N+++ +Y +CG + A+ FN ++ KD+ +WN ++
Sbjct: 453 LMCGKEIHAHALKAGMGFDGFL--PNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILL 509
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGL 368
GYAQ G ++LF+ M++ + PD +TF+ ++ +C G+V EG YF M + +
Sbjct: 510 TGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHI 569
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES-----RLLLEPECAAT 423
P L HY+CVVDLLGRAG L EA +FI++MPI P+ IW A + R +L E AA
Sbjct: 570 TPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQ 629
Query: 424 HV------------QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
H+ L NLYA WD+ A+VR+ MK++GL +PGCSW+E+ V+ F
Sbjct: 630 HIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFL 689
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGY 499
+ D + ++ EI VL+ ++MKT G+
Sbjct: 690 SGDNFHPQMQEINVVLEGFYEKMKTSGF 717
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 13/310 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + ++H + ++ D + + SC ++ G +R F +V V ++L
Sbjct: 117 DEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNAL 176
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
IT+Y KC ++ A +F++MP R+ +SW A+I+ + + + LEL+ MR ++P+
Sbjct: 177 ITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDL 236
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T TS++SAC G G H +R + I V NSLI MY G+ +EA VF+
Sbjct: 237 MTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSG 296
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D+VSW ++I+G + L +A++ ++ M PD +T V+S+C G ++ G
Sbjct: 297 MECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMG 356
Query: 357 KVYFDSMAKHGLKPELDHY------SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA 410
M H L H + ++D+ + +E+A + Q+P + + W +
Sbjct: 357 ------MKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIP-DKDVISWTSV 409
Query: 411 ESRLLLEPEC 420
+ L + C
Sbjct: 410 INGLRINNRC 419
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 1/258 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D +++ +++C + R G +RT + N+ V +SLI +Y +A VF
Sbjct: 235 DLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVF 294
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
M R+VVSWT II+ D LE Y+ M + P++ T S+LSAC G L
Sbjct: 295 SGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLD 354
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G H R G Y+ VANSLI MY KC +E+A+ +F+ + KD++SW S+I G
Sbjct: 355 MGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLR 414
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ A+ F +M+ + KP+++T + +S+C G + GK K G+ +
Sbjct: 415 INNRCFEALIFFRKMI-LKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGF 473
Query: 374 HYSCVVDLLGRAGLLEEA 391
+ ++DL R G + A
Sbjct: 474 LPNAILDLYVRCGRMRTA 491
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 121/232 (52%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ +V +G++L++++ + + +A+ VF M R++ SW ++ + + D L LY
Sbjct: 66 LLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHR 125
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
+ + + P+ +TF S+L +C G+ L +GR H +R F + V N+LI+MY KCG+
Sbjct: 126 ILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGD 185
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
V A +F+ M +D +SWN+MI+GY ++ + ++LF M + + PD +T VIS+
Sbjct: 186 VVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISA 245
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
C G G + + + Y+ ++ + G +EA M
Sbjct: 246 CELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGM 297
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+++ N+L+SM+ + G+V A VF M +D+ SWN ++ GY + G A+ L+ ++
Sbjct: 69 VRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILW 128
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
++PD TF V+ SC + G+ + + ++D + ++ + + G +
Sbjct: 129 AGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVS 188
Query: 391 ARDFIKQMPIYPNAVIWEAAESRLLLEPEC 420
AR +MP + + W A S EC
Sbjct: 189 ARMLFDKMPT-RDRISWNAMISGYFENDEC 217
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 215/370 (58%), Gaps = 19/370 (5%)
Query: 147 STRNIRGGAPYQCLAIRTGF-IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
++++++ G + ++ G + V V +++ YSKC + D KVF+ M R++VSWT
Sbjct: 383 ASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWT 442
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
++ A++Q + L + +MR PN FTF+S+L +C L GR H +
Sbjct: 443 TLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKA 502
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + + ++LI MY KCG++ EA VF+ + DIVSW ++I+GYAQHGL A+ LF
Sbjct: 503 GLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLF 562
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
M +K +A+T L V+ +C HGG+VEEG YF M +G+ PE++HY+C++DLLGR
Sbjct: 563 RRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGR 622
Query: 385 AGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQL 427
G L++A +FI++MP+ PN ++W+ AA L + PE +AT+V L
Sbjct: 623 VGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLL 682
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N Y ++ +R +MKD+G+K PG SWI + V++F + D+ + + EI L
Sbjct: 683 SNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKL 742
Query: 488 DFLVDQMKTL 497
+ L +++K +
Sbjct: 743 EELREKIKAM 752
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 116/214 (54%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+YSKC A VF+EMP RNV SWT +I + + + M NS + P+ F
Sbjct: 110 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 169
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+++I+ +C G +L G+ H Q + GF ++I V+ SL++MY K G++E++ +VFN M
Sbjct: 170 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 229
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+ VSWN+MI+G +GL + A DLF M P+ T + V + V GK
Sbjct: 230 EHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE 289
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ ++ G++ + + ++D+ + G L +AR
Sbjct: 290 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDAR 323
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 3/263 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S + SC ++ G + GF +++V +SL+ +Y+K I D+Y VF M
Sbjct: 171 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 230
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
N VSW A+I+ +L+ M+N PN +T S+ A + G+
Sbjct: 231 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 290
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF--NNMHGKDIVSWNSMIAGYAQHG 316
+G + V +LI MY KCG++ +A VF N ++ WN+MI+GY+Q G
Sbjct: 291 QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSG 350
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY- 375
+ A++L+ +M + + D T+ V ++ ++ G+V + K GL +
Sbjct: 351 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVN 410
Query: 376 SCVVDLLGRAGLLEEARDFIKQM 398
+ + D + G LE+ R +M
Sbjct: 411 NAIADAYSKCGFLEDVRKVFDRM 433
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGF--FSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+L C G++ + ++ H ++ F + + N +Y KC A VF+ M
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+++ SW MI G +HGL F EM+ + PD + +I SC +E GK+
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + + ++++ + G +E++ ++ M N V W A
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSY-WVFNMMTEHNQVSWNA 238
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 221/397 (55%), Gaps = 35/397 (8%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
CG TR R + +A R+ V +SLIT Y++ + DA VF +M +NV++W
Sbjct: 1042 CGRTRAAR--CVFDRMASRS-----VVSETSLITGYARSANVEDAQMVFSQMVEKNVIAW 1094
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+IAA+AQ + + L L+ ++ + P +T+ ++L+AC L G+ AH ++
Sbjct: 1095 NVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLK 1154
Query: 265 MGF-FSY-----IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
GF F + + V NSL+ MY K G++++ VF M +D VSWN+MI G+AQ+G A
Sbjct: 1155 EGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRA 1214
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSC 377
A+ LFE M+ + PD++T +GV+S+C H GLVEEG+ YF SM + HG+ P DHY+C
Sbjct: 1215 KDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTC 1274
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPEC 420
++DLLGRAG L+E + IK+M + P+AV+W E A +L L+P
Sbjct: 1275 MIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRN 1334
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+ +V L+N+YA + W RVR MK +G+ PGCSWIEI V F A D +
Sbjct: 1335 SGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCK 1394
Query: 481 SEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
+EI +L + QM + V E D + TE
Sbjct: 1395 NEIHAILRIIQMQMSRV----SVDSENADGMMNYSTE 1427
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 157/296 (53%), Gaps = 3/296 (1%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
+D+ + + + +E + DA L + +++C +I G AI+ GF ++ +
Sbjct: 363 MDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILK 422
Query: 174 SSLITLYSKCRVIIDAYKV--FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
++L+ +YSKC + A ++ FE R+ SW ++I+ + + + L M+ S
Sbjct: 423 NALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQ-SE 481
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ PN TF+S L+AC L QG H IR G+ + + LI MYCKC + ++
Sbjct: 482 VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSI 541
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F +D++ WNSMI G A G +DLF+EM KQ +K D++TFLG + SC G
Sbjct: 542 RIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEG 601
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
V G+ YF M + P ++HY C+++LLG+ G + E DF++ MP P +W
Sbjct: 602 HVRLGRSYFTLMMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMW 657
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 161/322 (50%), Gaps = 39/322 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H + ++A ++A+++C + ++ R G L ++ +VY+GS+L+ +Y+KC
Sbjct: 883 MHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEW 942
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+A +VFE MP RN+VSW ++I + Q V L L+ M + P++ T S++SA
Sbjct: 943 PEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSA 1002
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQV-ANSLISMYCKCG------------------- 285
C G A +GR H + ++ F V +N+L+ MY KCG
Sbjct: 1003 CAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVS 1062
Query: 286 ------------NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
NVE+A VF+ M K++++WN +IA YAQ+G A+ LF + ++ V
Sbjct: 1063 ETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESV 1122
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK----PELDHY--SCVVDLLGRAGL 387
P T+ V+++C + ++ G+ + K G + PE D + + +VD+ + G
Sbjct: 1123 WPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGS 1182
Query: 388 LEEARDFIKQMPIYPNAVIWEA 409
+++ ++M N V W A
Sbjct: 1183 IDDGAKVFERMAARDN-VSWNA 1203
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 147/324 (45%), Gaps = 47/324 (14%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDLHRERLKVDASF-------------LSTAVTSCGSTRN 150
FD +L+ + ++ +H + VD F +S AV +C
Sbjct: 208 AFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNA 267
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV------------------------- 185
+ G +R G+ +V+V SS++ +Y+KC
Sbjct: 268 LEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSG 327
Query: 186 ------IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
I DA +VFE M RN+VSW A++ + + + L L++ MR E + T
Sbjct: 328 LASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITL 387
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA--VYVFNNM 297
S+LSACTG +G+G H I+ GFFS + N+L+ MY KCG + A + +F
Sbjct: 388 GSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMG 447
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D SWNS+I+GY +H ++ A+ +M + V P+ TF +++C + L+++G
Sbjct: 448 SERDSYSWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGM 506
Query: 358 VYFDSMAKHGLKPELDHYSCVVDL 381
M + G + + S ++D+
Sbjct: 507 QIHAYMIRKGYEIDDILRSVLIDM 530
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 133/269 (49%), Gaps = 33/269 (12%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S+ +++ ++ + +++ ++ C ++ G + F +NV +G++L+ +
Sbjct: 136 LSLFSNMNSLGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDV 195
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y C ++ DA + F+++ N +SW I+ + DM ++++ M ++ + P +T
Sbjct: 196 YGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTV 255
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN---- 295
+ + AC + AL +GR H +R G+ ++ V +S++ MY KCG ++ A +FN
Sbjct: 256 SHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPM 315
Query: 296 ---------------------------NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
M +++VSWN+M+ GY + A+ LF++M
Sbjct: 316 KDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQM 375
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGK 357
++ + DAIT V+S+C G+++ GK
Sbjct: 376 RQETREFDAITLGSVLSACT--GILDIGK 402
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%)
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
+ C + DA ++F+ MP+R+ SW AII A ++ L L+ M + + P D T
Sbjct: 96 AACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMA 155
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S+LS C L R H + F S + + +L+ +Y C + +A F+++
Sbjct: 156 SVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEP 215
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
+ +SWN ++ Y G+ A+D+F M+ V+P T + +CR +EEG+
Sbjct: 216 NAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIH 275
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ +HG + + S VVD+ + G ++ A+ P+
Sbjct: 276 AFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPM 315
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 117/269 (43%), Gaps = 32/269 (11%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV------------------- 202
+++ F+A ++ ++L++ Y++ + DA +VF+E+P N
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 203 ------------SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
S+ A+IAA AQ + L M N ++F S LSAC
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G H + + + ++L+ MY KC EEA VF M ++IVSWNS+I
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK-VYFDSMAKHGLK 369
Y Q+G A+ LF MMK PD +T V+S+C EG+ V+ + +
Sbjct: 967 CYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFR 1026
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++ + +VD+ + G AR +M
Sbjct: 1027 EDMVLSNALVDMYAKCGRTRAARCVFDRM 1055
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N I CG+V +A +F+ M +D SWN++I ++ G A+ LF M ++
Sbjct: 89 NRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIR 148
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
P T V+S C + + +AK + + + +VD+ G LL +AR
Sbjct: 149 PKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRA 208
Query: 395 IKQMPIYPNAVIW 407
+ + PNA+ W
Sbjct: 209 FDDI-LEPNAISW 220
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 216/387 (55%), Gaps = 19/387 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D S L+ A+ +CG + G L +R G +NV V ++LIT+YSKC+ + A VF
Sbjct: 262 DVSVLA-ALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVF 320
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+E+ R VSW A+I AQ + + L+ M+ ++P+ FT S++ A
Sbjct: 321 DELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPL 380
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
Q R H +IR+ + V +LI MY KCG V A +FN+ + +++WN+MI GY
Sbjct: 381 QARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYG 440
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPEL 372
HG A++LFEEM + P+ TFL V+S+C H GLV+EG+ YF SM + +GL+P +
Sbjct: 441 SHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGM 500
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLL 415
+HY +VDLLGRAG L+EA FI++MP+ P ++ E+A+
Sbjct: 501 EHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFE 560
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L P+ HV LAN+YA W ARVR M+ GL+ PG S I++ N ++ F +
Sbjct: 561 LGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGST 620
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ + EI L L++++K +GYVP+
Sbjct: 621 NHQQAKEIYSRLAKLIEEIKAVGYVPD 647
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 120/217 (55%), Gaps = 2/217 (0%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G A + LA R G + ++L +Y+KCR DA +VF+ MPVR+ V+W A++A +A
Sbjct: 78 GRAVHAQLAAR-GIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYA 136
Query: 213 QEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
+ M +E+ RM P+ T S+L AC + AL R AH IR G +
Sbjct: 137 RNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELV 196
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
VA +++ YCKCG++ A VF+ M K+ VSWN+MI GYAQ+G + A+ LF M+++
Sbjct: 197 NVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEE 256
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
V ++ L + +C G ++EG + + + GL
Sbjct: 257 GVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGL 293
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 103/189 (54%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
AIR+G V V ++++ Y KC I A VF+ MP +N VSW A+I +AQ
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
L L+ M ++ D + + L AC G L +G H +R+G S + V N+L
Sbjct: 244 REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNAL 303
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
I+MY KC V+ A +VF+ + + VSWN+MI G AQ+G + A+ LF M + VKPD+
Sbjct: 304 ITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363
Query: 338 ITFLGVISS 346
T + VI +
Sbjct: 364 FTLVSVIPA 372
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 25/287 (8%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L + M ++ P TFTS+L C G L GR+ H Q G S A +L +M
Sbjct: 44 LAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANM 103
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAIT 339
Y KC +A VF+ M +D V+WN+++AGYA++GLA A+++ M ++ +PD+IT
Sbjct: 104 YAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSIT 163
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ V+ +C + + + + GL+ ++ + ++D + G + AR MP
Sbjct: 164 LVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMP 223
Query: 400 IYPNAVIWEA--------AESR-------LLLEPECAATHVQ-LANLYA--GVRCWDQAA 441
N+V W A +SR ++E T V LA L A + C D+
Sbjct: 224 T-KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 442 RVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
RV +L+ GL +N + +MN + ++ K S + LD
Sbjct: 283 RVHELLVRIGLDSN-----VSVMNALITMYSKCKRVDLASHVFDELD 324
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 210/360 (58%), Gaps = 20/360 (5%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ +V +S+I Y++C + A ++F MP RNV SWTA+I+ +AQ Q L ++ M
Sbjct: 145 VRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLM 204
Query: 227 MRN-SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M + + PN+ T S+L AC GAL G G+F + V+N+L+ MY +CG
Sbjct: 205 MEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCG 264
Query: 286 NVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
+++A VF + G+ ++ SWNSMI G A HG AI+LF +M+++ PD +TF+GV+
Sbjct: 265 RIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVL 324
Query: 345 SSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
+C HGG+V EG+ +F+SM + + P+L+HY C+VDLLGRAG L EA D I +MP+ P+
Sbjct: 325 LACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPD 384
Query: 404 AVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKL 446
+V+W +AA + LEP +V L+N+YA WD AR+RKL
Sbjct: 385 SVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKL 444
Query: 447 MKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
MK + G S+IE +++F ED+S++R EI +LD + +MK G V + E
Sbjct: 445 MKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNVNDSDSE 504
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 32/264 (12%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A+K+F+ +P V + +I A++ C LY M PN+ +FT + SAC
Sbjct: 35 AHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACAS 94
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ QGR H ++ GF + +L+ MY K G + A F+ M +D+ +WNSM
Sbjct: 95 LSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSM 154
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRV--------------------------------KPD 336
IAGYA+ G A++LF M + V +P+
Sbjct: 155 IAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPN 214
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+T V+ +C + G +E G+ +G L + ++++ R G +++A +
Sbjct: 215 EVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFE 274
Query: 397 QMPIYPNAVIWEAAESRLLLEPEC 420
++ N W + L + C
Sbjct: 275 EIDGRRNLCSWNSMIMGLAVHGRC 298
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++ + +C + + G + A G+ N+YV ++L+ +Y++C I A+ VFEE+
Sbjct: 218 LASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEID 277
Query: 198 V-RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
RN+ SW ++I A + D +EL+ M P+D TF +L ACT G + +G+
Sbjct: 278 GRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQ 337
Query: 257 SAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQ 314
R ++ ++ + + G + EA + M + D V W +++ +
Sbjct: 338 HFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSF 397
Query: 315 HG---LAVRAID-LFE 326
HG LA +A LFE
Sbjct: 398 HGHVELAEKAAGALFE 413
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
T+R G I+ LI + ++ A +F+ + + +N +I Y+ HG +
Sbjct: 11 TLRNG----IEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQC 66
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
L+ +M Q P+ +F + S+C ++G++ K G ++ + +VD+
Sbjct: 67 FSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDM 126
Query: 382 LGRAGLLEEARDFIKQMPI 400
+ GLL AR +M +
Sbjct: 127 YAKLGLLSLARKQFDEMTV 145
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 241/462 (52%), Gaps = 36/462 (7%)
Query: 80 SKHLDSQKFNHDFTGTNSTFG---SSNVFDQLLDTPVVDVEKLISMHHDLHRER------ 130
S H D + TG S + +FD++ VV +IS + ++ R +
Sbjct: 139 SSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELF 198
Query: 131 -------LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+K D S ++T +++C + N+ G GF +N+ + ++LI LYSKC
Sbjct: 199 NEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKC 258
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ A+ +FE + ++V+SW +I +A L +++ M PND T SIL
Sbjct: 259 GEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSIL 318
Query: 244 SACTGSGALGQGRSAHCQTIRM--GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
AC GA+ GR H + G + + SLI MY KCGN+E A VF+ + K
Sbjct: 319 PACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKS 378
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+ S N+MI G+A HG A A DL M K ++PD ITF+G++S+C H GL + G+ F
Sbjct: 379 LSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFK 438
Query: 362 SMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----------- 409
SM + ++P+L+HY C++DLLGR+GL +EA + I M + P+ VIW +
Sbjct: 439 SMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNL 498
Query: 410 ------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
A+ + +EP+ ++V L+N+YA WD ARVR L+ DKGLK PGCS IEI
Sbjct: 499 ELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEI 558
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
++V+ F DK + + EI +L+ + + G+V + E
Sbjct: 559 DSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSE 600
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 142/282 (50%), Gaps = 35/282 (12%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
SC ++ + G ++ G +++V +SLI++Y++ ++ DA+KVF+ R+VVS
Sbjct: 87 SCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVS 146
Query: 204 WTAIIAAFAQEWQVDM-------------------------------CLELYRMMRNSML 232
+TA+I +A +D LEL+ M +
Sbjct: 147 YTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDV 206
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+P++ T ++LS CT SG + GR H GF S +++ N+LI +Y KCG +E A
Sbjct: 207 KPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHG 266
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F + KD++SWN++I GYA A+ +F+EM+K P+ +T L ++ +C H G
Sbjct: 267 LFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGA 326
Query: 353 VEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
++ G+ VY D K G+ + ++D+ + G +E A
Sbjct: 327 IDIGRWIHVYIDKKLK-GIITNTSLQTSLIDMYAKCGNIEAA 367
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 114/250 (45%), Gaps = 32/250 (12%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF+ + N +SW +I A L LY M + L PN +TF + +C
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
S A +G+ H Q ++ G + V SLISMY + G VE+A VF+ +D+VS+ +M
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 309 IAGYAQHG-----------LAVR--------------------AIDLFEEMMKQRVKPDA 337
I GYA G + ++ A++LF EMMK VKPD
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
T V+S+C H G VE G+ + HG L + ++DL + G +E A +
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 398 MPIYPNAVIW 407
+ Y + + W
Sbjct: 271 LQ-YKDVISW 279
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/331 (39%), Positives = 193/331 (58%), Gaps = 19/331 (5%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSG 250
+FEEMP RN+ SW A+I +A L + RM+ S + PND T ++LSAC G
Sbjct: 286 LFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLG 345
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL G+ H G + V N+L+ MY KCG +E A+ VF M KD++SWN++I
Sbjct: 346 ALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIG 405
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLK 369
G A H A++LF +M KPD ITF+G++ +C H GLVE+G YF SMA + +
Sbjct: 406 GLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIM 465
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESR 413
P+++HY C+VD+L RAG LE+A F+++MP+ + VIW E A R
Sbjct: 466 PQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQR 525
Query: 414 LL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
L+ LEP+ A +V L+N+Y W+ AR++ M+D G K PGCS IE+ + V F +
Sbjct: 526 LIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYS 585
Query: 473 EDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
D+ + ++ EI VL LV +++ GYVP++
Sbjct: 586 LDERHPQIEEIYGVLRGLVKVLRSFGYVPDL 616
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 152/350 (43%), Gaps = 36/350 (10%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
H L ER F+S + SC +++ + Q I GF N Y+ L+T+ +
Sbjct: 34 HRLLEER------FISL-LQSCKTSKQVH---QIQAQIIANGFQYNEYITPKLVTICATL 83
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ + A ++F+++P N+ W ++ +AQ + L+ M+ + PN FTF +L
Sbjct: 84 KRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVL 143
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
+C AL +G HC I+ GF V +LI MY G V +A +F M +++V
Sbjct: 144 KSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVV 203
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+W SMI GY V A LF ++ +R D + + ++S GG + E + F M
Sbjct: 204 AWTSMINGYILSADLVSARRLF-DLAPER---DVVLWNIMVSGYIEGGDMVEARKLFHEM 259
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP---IYP-NAVIWEAAESRLLLE-- 417
++ ++ V+ G +E ++MP I+ NA+I A + L E
Sbjct: 260 PNR----DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVL 315
Query: 418 ------------PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
P AT V + + A + D V + GLK N
Sbjct: 316 GSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGN 365
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/331 (39%), Positives = 193/331 (58%), Gaps = 19/331 (5%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSG 250
+FEEMP RN+ SW A+I +A L + RM+ S + PND T ++LSAC G
Sbjct: 349 LFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLG 408
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL G+ H G + V N+L+ MY KCG +E A+ VF M KD++SWN++I
Sbjct: 409 ALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIG 468
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLK 369
G A H A++LF +M KPD ITF+G++ +C H GLVE+G YF SMA + +
Sbjct: 469 GLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIM 528
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESR 413
P+++HY C+VD+L RAG LE+A F+++MP+ + VIW E A R
Sbjct: 529 PQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQR 588
Query: 414 LL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
L+ LEP+ A +V L+N+Y W+ AR++ M+D G K PGCS IE+ + V F +
Sbjct: 589 LIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYS 648
Query: 473 EDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
D+ + ++ EI VL LV +++ GYVP++
Sbjct: 649 LDERHPQIEEIYGVLRGLVKVLRSFGYVPDL 679
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 146/336 (43%), Gaps = 29/336 (8%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L + SC +++ + Q I GF N Y+ L+T+ + + + A ++F+++P
Sbjct: 104 LRENMRSCKTSKQVH---QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIP 160
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
N+ W ++ +AQ + L+ M+ + PN FTF +L +C AL +G
Sbjct: 161 DPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQ 220
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
HC I+ GF V +LI MY G V +A +F M +++V+W SMI GY
Sbjct: 221 VHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSAD 280
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
V A LF ++ +R D + + ++S GG + E + F M ++ ++
Sbjct: 281 LVSARRLF-DLAPER---DVVLWNIMVSGYIEGGDMVEARKLFXEMPNR----DVMFWNT 332
Query: 378 VVDLLGRAGLLEEARDFIKQMP---IYP-NAVIWEAAESRLLLE--------------PE 419
V+ G +E ++MP I+ NA+I A + L E P
Sbjct: 333 VLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPP 392
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
AT V + + A + D V + GLK N
Sbjct: 393 NDATLVTVLSACARLGALDLGKWVHVYAESSGLKGN 428
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 209/359 (58%), Gaps = 19/359 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+T + +VG++L+ YSK DA +F+ + ++VV+W+A+++ AQ +
Sbjct: 427 IKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGAT 486
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACT-GSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L+ M ++PN+FT +S++ AC S + QGR H +I+ + I V+++L+SM
Sbjct: 487 YLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSM 546
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y + GN++ A VF +D+VSWNSMI+GYAQHG +++AI+ F +M ++ D +TF
Sbjct: 547 YSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTF 606
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
L VI C H GLV EG+ YFDSM + H + P ++HY+C+VDL RAG L+E I+ MP
Sbjct: 607 LAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMP 666
Query: 400 IYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
A++W +A+ L LEP ++T+V L+N+YA W +
Sbjct: 667 FPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDE 726
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
VRKLM + +K GCSWI+I N V+ F A DKS+ +I L ++ ++K GY P
Sbjct: 727 VRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSP 785
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 142/283 (50%), Gaps = 1/283 (0%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGF-IANVYVGSSLITLYSKCRVI 186
R + VD++ LS + +C S + G CL ++ G V G+SL+ +Y KC +
Sbjct: 92 RGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSV 151
Query: 187 IDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC 246
+ +VFE MP +NVV+WT+++ A + L+ MR + PN FTF S+LSA
Sbjct: 152 CEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAV 211
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
GAL G+ H Q+++ G S + V NSL++MY KCG VE+A VFN M +D+VSWN
Sbjct: 212 ASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWN 271
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+++AG + + A+ LF E K T+ VI C + + + + KH
Sbjct: 272 TLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKH 331
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G + + + D + G L +A + N V W A
Sbjct: 332 GFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTA 374
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + H+ K+ S +T + C + + + ++ GF V ++L
Sbjct: 287 LQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADA 346
Query: 180 YSKCRVIIDAYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
YSKC + DA +F RNVVSWTAII+ Q + + + L+ MR + PN+FT
Sbjct: 347 YSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFT 406
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
++++L A H Q I+ + V +L++ Y K G+ E+A+ +F +
Sbjct: 407 YSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIE 462
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR-HGGLVEEGK 357
KD+V+W++M++ +AQ G A LF +M Q +KP+ T VI +C V++G+
Sbjct: 463 QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGR 522
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ K+ + S +V + R G ++ A+
Sbjct: 523 QFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 4/237 (1%)
Query: 193 FEEMPVRNV-VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+E+P R+ V ++ +A+ V L+ + + R + + T + +L AC
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 252 LGQGRSAHCQTIRMGF-FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G HC ++ G + SL+ MY KCG+V E + VF M K++V+W S++
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G A + + LF M + + P+ TF V+S+ G ++ G+ K G +
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQL 427
+ + ++++ + GL+E+A+ M + V W + L L EC +QL
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMAGLQLN-ECELEALQL 289
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 218/390 (55%), Gaps = 22/390 (5%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S A+ C + ++ GG GF+++ + ++L+ LYS C DA KVF+E+P
Sbjct: 117 SFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQ 176
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM---LEPNDFTFTSILSACTGSGALGQG 255
R+ VSW +I+ + + + L L+ M+N + ++P++ T L AC GAL G
Sbjct: 177 RDTVSWNVLISCYLRNKRTRDVLVLFDKMKNDVDRCVKPDNVTCLLALQACANLGALDFG 236
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H G + ++N+L+SMY +CG++++A VFN M +++VSW +MI+G A +
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMN 296
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM--AKHGLKPELD 373
G AI+ F EM+K + P+ T G++S+C H GLV+EG ++FD M + +KP L
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLH 356
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-L 416
HY C+VDLLGRA LL++A IK M + P++ IW E + L+
Sbjct: 357 HYGCIVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGNVELGERVIAHLIEF 416
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKS 476
+ E A +V L N Y+ V W++ +R LMK K ++TNPGCS IE+ V+ F +D S
Sbjct: 417 KAEEAGDYVLLLNTYSSVGKWEKVTELRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVS 476
Query: 477 NTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
+ R EI +L + Q+K GYV E+ E
Sbjct: 477 HPRKEEIYKMLAEINQQLKIAGYVAEITSE 506
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 216/387 (55%), Gaps = 19/387 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D S L+ A+ +CG + G L +R G +NV V ++LIT+YSKC+ + A VF
Sbjct: 262 DVSVLA-ALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVF 320
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+E+ R VSW A+I AQ + + L+ M+ ++P+ FT S++ A
Sbjct: 321 DELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPL 380
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
Q R H +IR+ + V +LI MY KCG V A +FN+ + +++WN+MI GY
Sbjct: 381 QARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYG 440
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPEL 372
HG A++LFEEM + P+ TFL V+S+C H GLV+EG+ YF SM + +GL+P +
Sbjct: 441 SHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGM 500
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLL 415
+HY +VDLLGRAG L+EA FI++MP+ P ++ E+A+
Sbjct: 501 EHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFE 560
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L P+ HV LAN+YA W ARVR M+ GL+ PG S I++ N ++ F +
Sbjct: 561 LGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGST 620
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ + EI L L++++K +GYVP+
Sbjct: 621 NHQQAKEIYSRLAKLIEEIKAVGYVPD 647
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 120/217 (55%), Gaps = 2/217 (0%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G A + LA R G + ++L +Y+KCR DA +VF+ MPVR+ V+W A++A +A
Sbjct: 78 GRAVHAQLAAR-GIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYA 136
Query: 213 QEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
+ M +E+ RM P+ T S+L AC + AL R AH IR G +
Sbjct: 137 RNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELV 196
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
VA +++ YCKCG++ A VF+ M K+ VSWN+MI GYAQ+G + A+ LF M+++
Sbjct: 197 NVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEE 256
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
V ++ L + +C G ++EG + + + GL
Sbjct: 257 GVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGL 293
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 103/189 (54%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
AIR+G V V ++++ Y KC I A VF+ MP +N VSW A+I +AQ
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
L L+ M ++ D + + L AC G L +G H +R+G S + V N+L
Sbjct: 244 REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNAL 303
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
I+MY KC V+ A +VF+ + + VSWN+MI G AQ+G + A+ LF M + VKPD+
Sbjct: 304 ITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363
Query: 338 ITFLGVISS 346
T + VI +
Sbjct: 364 FTLVSVIPA 372
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 25/287 (8%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L + M ++ P TFTS+L C G L GR+ H Q G S A +L +M
Sbjct: 44 LAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANM 103
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAIT 339
Y KC +A VF+ M +D V+WN+++AGYA++GLA A+++ M ++ +PD+IT
Sbjct: 104 YAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSIT 163
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ V+ +C + + + + GL+ ++ + ++D + G + AR MP
Sbjct: 164 LVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMP 223
Query: 400 IYPNAVIWEA--------AESR-------LLLEPECAATHVQ-LANLYA--GVRCWDQAA 441
N+V W A +SR ++E T V LA L A + C D+
Sbjct: 224 T-KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 442 RVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
RV +L+ GL +N + +MN + ++ K S + LD
Sbjct: 283 RVHELLVRIGLDSN-----VSVMNALITMYSKCKRVDLASHVFDELD 324
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 213/418 (50%), Gaps = 52/418 (12%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
DL E ++ D+ L + +T IR G +AI G +N +VG +L+ +Y KC
Sbjct: 396 DLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCN 455
Query: 185 VIIDAYKVFEEMPVR-----------------------------------NVVSWTAIIA 209
II A F+E+ R NV +W +I+A
Sbjct: 456 DIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILA 515
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ Q D+ ++L+ M+ S L P+ +T IL+AC+ + +G+ H +IR G+ S
Sbjct: 516 GLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDS 575
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ +L+ MY KCG+++ V+N + ++V N+M+ YA HG I +F M+
Sbjct: 576 DAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRML 635
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
RV+PD +TFL V+SSC H G ++ G F M + + P L HY+C+VDLL RAG L+
Sbjct: 636 DSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMETYNITPTLKHYTCMVDLLSRAGKLD 695
Query: 390 EARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYA 432
EA IK MP+ ++V W AAE + LEP +V LANLYA
Sbjct: 696 EAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYA 755
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
W A+ R+LM DKG++ +PGCSWIE + V+ F A DKS+ R+ EI +LD L
Sbjct: 756 SAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLDNL 813
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 5/276 (1%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+T T S+ ++ G +I+TGF + +V + L+ +YS DA+ +F++M +
Sbjct: 35 TTYSTILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTL 94
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDF-TFTSILSACTGSGALGQGR 256
+N+ SWTA++ L+ + + + E DF F +L+ C G G L GR
Sbjct: 95 KNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGR 154
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H ++ GF + + V N+LI MY KCG+++EA V M KD VSWNS+I +G
Sbjct: 155 QVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANG 214
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+ A+DL E M+ ++P+ +T+ VI E F M G+ P+ +
Sbjct: 215 VVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLA 274
Query: 377 CVVDLLGRAGLL---EEARDFIKQMPIYPNAVIWEA 409
V+ R L +E +I + ++ N + A
Sbjct: 275 SVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANA 310
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 59/354 (16%)
Query: 77 QTDSKHLDSQKFNHDFTGT--------NSTFGSS-NVFDQLLDTPVVDVEKLISMHHD-- 125
Q S + + +NH+F T NS+F + ++FD++ + ++ +H +
Sbjct: 52 QLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMG 111
Query: 126 -------LHRERL------KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
L E L K+D + C ++ G + ++ GF+ NVYV
Sbjct: 112 LFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYV 171
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
G++LI +Y KC + +A KV E M ++ VSW +II A V L+L M S L
Sbjct: 172 GNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSEL 231
Query: 233 EPNDFTFT-----------------------------------SILSACTGSGALGQGRS 257
EPN T++ S+L AC+ L G+
Sbjct: 232 EPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKE 291
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R FS VAN+L+ MY +CG+++ A +F+ K S+N+MI GY ++G
Sbjct: 292 LHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGN 351
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+A +LF +M ++ V+ D I++ +IS + ++ + F + G++P+
Sbjct: 352 VGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPD 405
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 45/279 (16%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
DA L++ + +C + + G +R +N +V ++L+ +Y +C + A+K+F
Sbjct: 269 DARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIF 328
Query: 194 -----------------------------------EEMPVRNVVSWTAIIAAFAQEWQVD 218
+E R+ +SW +I+ + D
Sbjct: 329 SKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFD 388
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L L+R + +EP+ FT SIL+ + QG+ H I G S V +L+
Sbjct: 389 DALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALV 448
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MYCKC ++ A F+ + +D +WN++I+GYA+ + +L E M +P+
Sbjct: 449 EMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVY 508
Query: 339 TFLGVISSCRHGGLVEEGKV-----YFDSMAKHGLKPEL 372
T+ +++ GLVE + F+ M L+P++
Sbjct: 509 TWNSILA-----GLVENKQYDLAMQLFNEMQVSSLRPDI 542
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
S+L T T+ + S +L G+ H +I+ GF+++ V L+ MY + E+
Sbjct: 25 SLLHTPPLTSTTYSTILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFED 84
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV--KPDAITFLGVISSC 347
A ++F+ M K++ SW +++ + GL + LFEE + + K D F V++ C
Sbjct: 85 AWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNIC 144
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPN 403
G +E G+ + KHG + + ++D+ G+ G L+EA+ ++ M + N
Sbjct: 145 CGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWN 204
Query: 404 AVIWEAAESRLLLEPECAATHVQLANLYAGVRCW 437
++I + ++ E ++ L+ L V W
Sbjct: 205 SIITACVANGVVYEALDLLENMLLSELEPNVVTW 238
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 226/424 (53%), Gaps = 52/424 (12%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC------- 183
L D L++ +++C + + G + TGF + V ++LI++YS+C
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 184 ----------------RVIIDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQV 217
++D Y +F + R+VV+WTA+I + Q
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+ L+R M PN +T ++LS + +L G+ H ++ G + V+N+L
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454
Query: 278 ISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
I+MY K GN+ A F+ + +D VSW SMI AQHG A A++LFE M+ + ++PD
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
IT++GV S+C H GLV +G+ YFD M + P L HY+C+VDL GRAGLL+EA++FI
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 396 KQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWD 438
++MPI P+ V W AAE LLLEPE + + LANLY+ W+
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 439 QAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
+AA++RK MKD +K G SWIE+ + V+ F ED ++ +EI + + D++K +G
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 694
Query: 499 YVPE 502
YVP+
Sbjct: 695 YVPD 698
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 63/303 (20%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C I++G + +VY+ ++L+ +YSK + A K+F+EMP+R SW +++A+++ +
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 218 DMCLELYRMM--RNSM-----------------------------LEPNDFTFTSILSAC 246
D E + + R+S+ +EP FT T++L++
Sbjct: 97 DSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASV 156
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN----------- 295
+ + G+ H +++G + V+NSL++MY KCG+ A +VF+
Sbjct: 157 AATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWN 216
Query: 296 --------------------NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VK 334
M +DIV+WNSMI+G+ Q G +RA+D+F +M++ +
Sbjct: 217 AMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS 276
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
PD T V+S+C + + GK + G + ++ + R G +E AR
Sbjct: 277 PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 395 IKQ 397
I+Q
Sbjct: 337 IEQ 339
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 231 MLEPNDFTFTSILSACTG--------SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
M P + +++L CT S + HC+ I+ G + + N+L+++Y
Sbjct: 1 MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYS 60
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
K G A +F+ M + SWN++++ Y++ G + F++ + QR D++++
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQ-LPQR---DSVSWTT 116
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKP 370
+I ++ G + M K G++P
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 219/402 (54%), Gaps = 18/402 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H K D + A + G ++ G + I+ F +++V S ++ +Y KC
Sbjct: 491 MHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGE 550
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A KVF ++P + V+WT +I+ + + + L Y MR + ++P+++TF +++ A
Sbjct: 551 MKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKA 610
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C+ AL QG+ H +++ V SL+ MY KCGN+E+A +F M+ + + W
Sbjct: 611 CSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALW 670
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI G AQHG A A++ F EM + V PD +TF+GV+S+C H GL + FDSM K
Sbjct: 671 NAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQK 730
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------------- 409
+G++PE++HYSC+VD L RAG ++EA + MP +A ++
Sbjct: 731 TYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGE 790
Query: 410 --AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
AE ++P +A +V L+N+YA W+ A R +MK +K PG SWI++ N V
Sbjct: 791 RVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKV 850
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
+ F A D+S+ I +++++ ++K GYVP+ VD
Sbjct: 851 HLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVD 892
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 2/284 (0%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
D+ + R+ D+ ++ S ++ G +R G+ V V +S I +Y K
Sbjct: 287 DMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAG 346
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ A ++F +M +++SW +I+ A+ + L L+ + S L P+ FT TS+L
Sbjct: 347 SVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLR 406
Query: 245 ACTG-SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
AC+ + GR H ++ G V+ +LI +Y K G +EEA +F+N G D+
Sbjct: 407 ACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLA 466
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SWN+M+ G+ A+ LF M ++ K D ITF + +++GK +
Sbjct: 467 SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVV 526
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K +L S ++D+ + G ++ AR Q+P P+ V W
Sbjct: 527 IKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAW 569
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 8/289 (2%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRN--IRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
DL R L D +++ + +C S G + C A++ G + + +V ++LI +YSK
Sbjct: 388 DLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTC-ALKAGIVLDSFVSTALIDVYSK 446
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
+ +A +F ++ SW A++ F L L+ +M + + TF +
Sbjct: 447 GGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANA 506
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
A L QG+ H I+M F + V + ++ MY KCG ++ A VFN + D
Sbjct: 507 AKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDD 566
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
V+W ++I+G ++G +A+ + +M V+PD TF ++ +C +E+GK +
Sbjct: 567 VAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHAN 626
Query: 363 MAKHGLKPELDHY--SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K L D + + +VD+ + G +E+A ++M A +W A
Sbjct: 627 IMK--LNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVA-LWNA 672
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 14/246 (5%)
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY--KVFEEMPVRNVVSWTAIIA 209
R G C+++RT + +G T++ + + AY K+F +V W ++
Sbjct: 216 RSGLRPDCVSVRT-----ILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLS 270
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
++ Q + ++ +R M S + + T+ ILS L G+ H +R G+
Sbjct: 271 SYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQ 330
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
++ VANS I+MY K G+V A +F M D++SWN++I+G A+ GL ++ LF +++
Sbjct: 331 FVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLL 390
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEE----GKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
+ + PD T V+ +C +EE G+ K G+ + + ++D+ +
Sbjct: 391 RSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKG 447
Query: 386 GLLEEA 391
G +EEA
Sbjct: 448 GKMEEA 453
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 98/194 (50%), Gaps = 8/194 (4%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAF 211
G + + +G + YV ++LIT+Y+KC + A K+F+ P R++V++ AI+AA+
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 212 AQEWQVD------MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
A ++ ++R++R S++ T + + C G+ + +++
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + VA +L+++Y K + EA +F+ M +D+V WN M+ Y + G + LF
Sbjct: 152 GLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Query: 326 EEMMKQRVKPDAIT 339
+ ++PD ++
Sbjct: 212 SAFHRSGLRPDCVS 225
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
Q A++ G +V+V +L+ +Y+K + I +A +F+ MPVR+VV W ++ A+ +
Sbjct: 145 QGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAG 204
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
D L L+ S L P+ + +IL +G G+ + F ++ +
Sbjct: 205 DEVLGLFSAFHRSGLRPDCVSVRTIL--------MGVGK-------KTVFERELEQVRAY 249
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ C + D+ WN ++ Y Q G A+D F +M+K RV D+
Sbjct: 250 ATKLFVCDD------------DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDS 297
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
+T++ ++S +E GK ++ + G + + +++ +AG + AR Q
Sbjct: 298 LTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQ 357
Query: 398 MP----IYPNAVIWEAAESRLLLEPECA 421
M I N VI A S L EC+
Sbjct: 358 MKEVDLISWNTVISGCARSGL---EECS 382
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + +H + ++ D +T V +C + G ++ + +V +SL
Sbjct: 583 EQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSL 642
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC I DAY +F M R+V W A+I AQ + L + M++ + P+
Sbjct: 643 VDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDR 702
Query: 237 FTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF +LSAC+ SG ++ G I+ + L+ + G+++EA V +
Sbjct: 703 VTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVS 762
Query: 296 NM 297
+M
Sbjct: 763 SM 764
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 11/192 (5%)
Query: 226 MMRNSMLEPNDF--TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
M R + P+ + SIL L G+ H + G V N+LI+MY K
Sbjct: 1 MSRKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAK 60
Query: 284 CGNVEEAVYVFN--NMHGKDIVSWNSMIAGYAQHG------LAVRAIDLFEEMMKQRVKP 335
CG++ A +F+ +D+V++N+++A YA G A +F + + +
Sbjct: 61 CGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLT 120
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
T + C G + K GL+ ++ +V++ + + EAR
Sbjct: 121 TRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLF 180
Query: 396 KQMPIYPNAVIW 407
+MP+ + V+W
Sbjct: 181 DRMPV-RDVVLW 191
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 218/395 (55%), Gaps = 19/395 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + ++ E +K + L++ + +C + + G IR ++++ SSL+ L
Sbjct: 293 IQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDL 352
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + A +F+ MP VSW +I+ + E ++ L L+ M S +EP+ TF
Sbjct: 353 YFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITF 412
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
TS+L+AC+ AL +GR H + + V +L+ MY KCG VEEA VF +
Sbjct: 413 TSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPE 472
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+VSW SMI Y HG A++LF EM++ VKPD +TFL ++S+C H GLV++G +
Sbjct: 473 RDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYH 532
Query: 360 FDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP-----------------IY 401
F+ M +G+ P ++HYSC++ LLGRAG L EA + ++ P ++
Sbjct: 533 FNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLH 592
Query: 402 PNAVIW-EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
N + E AE+ + +P+ ++T++ L+N+YA WD+ VR MKD GLK NPGCSW
Sbjct: 593 KNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSW 652
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
IEI + F ED S+ L I +L +L M+
Sbjct: 653 IEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHME 687
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 140/269 (52%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
LK D+ + + +CG R + G ++ G + ++ VGSSL+ +Y+KC A
Sbjct: 102 LKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAV 161
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F+EMP ++V W +I+ + Q + + L + MMR EP+ T T+ +S+C
Sbjct: 162 KLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLL 221
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L +GR H + + GF V+ +L+ MY KCG +E A+ VF M K +V+WNSMI
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMIN 281
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY G + I LF+ M + VKP T + +C + EGK + ++ ++P
Sbjct: 282 GYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQP 341
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++ S ++DL + G +E A K MP
Sbjct: 342 DIFLNSSLMDLYFKCGKVESAETIFKLMP 370
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 157/309 (50%), Gaps = 13/309 (4%)
Query: 104 VFDQLLDTPVVDVEKLISMHHD-------------LHRERLKVDASFLSTAVTSCGSTRN 150
+FD++ D V +IS ++ + R + D+ ++TA++SC +
Sbjct: 163 LFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLD 222
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G + +GF + +V ++L+ +Y KC + A +VFE+MP + VV+W ++I
Sbjct: 223 LDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMING 282
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ + C++L++ M + ++P T TS L AC+ S L +G+ H IR
Sbjct: 283 YGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPD 342
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
I + +SL+ +Y KCG VE A +F M VSWN MI+GY G A+ LF EM K
Sbjct: 343 IFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSK 402
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
V+PDAITF V+++C +E+G+ + + + L ++D+ + G +EE
Sbjct: 403 SFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEE 462
Query: 391 ARDFIKQMP 399
A K +P
Sbjct: 463 AFGVFKCLP 471
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 4/270 (1%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+DA L + + ++++++ G + G +VYV +LI+LY C + A V
Sbjct: 1 MDARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNV 60
Query: 193 FE--EMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGS 249
F+ E P + ++A + + D L L+ ++M L+P+ +T+ S+L AC G
Sbjct: 61 FDVIENPFE-ISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGL 119
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
+ G+ H ++ G I V +SL+ MY KC E AV +F+ M KD+ WN++I
Sbjct: 120 RRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVI 179
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+ Y Q G A+ F M + +PD++T ISSC ++ G+ + G +
Sbjct: 180 SCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFR 239
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + +VD+ G+ G LE A + +QMP
Sbjct: 240 MDSFVSAALVDMYGKCGQLEMAIEVFEQMP 269
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 219/379 (57%), Gaps = 34/379 (8%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+ S++I+ Y++ + +A ++FE MP+RNVVSW A+IA +AQ + +EL+R M+
Sbjct: 223 NLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQ 282
Query: 229 N-SMLEPNDFTFTSILSACTGSGALGQGRSAHC----QTIRMGFFSYIQVANSLISMYCK 283
+ L PND T S+LSAC GAL G+ H I +G F + N+L MY K
Sbjct: 283 HEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLF----LGNALADMYAK 338
Query: 284 CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
CG V EA VF+ MH +D++SW+ +I G A +G A A + F EM++ ++P+ I+F+G+
Sbjct: 339 CGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGL 398
Query: 344 ISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
+++C H GLV++G YFD M + +G+ P+++HY CVVDLL RAG L++A I MP+ P
Sbjct: 399 LTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQP 458
Query: 403 NAVIWEA----------AES------RLL-LEPECAATHVQLANLYAGVRCWDQAARVRK 445
N ++W A AE R+L L+ + + V LAN+YA + D AA R
Sbjct: 459 NVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRL 518
Query: 446 LMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE--- 502
M+D PGCSWIEI N VY F D S+ + I ++ L +MK GY P+
Sbjct: 519 RMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDL 578
Query: 503 ----VHEEKVDDASHKRTE 517
+ EE+ +DA +E
Sbjct: 579 VIHNIDEEEKEDALSTHSE 597
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 40/266 (15%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D ++ + +C + G C + G +N++V +SL+ LY K A K+F
Sbjct: 126 DEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLF 185
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+EM VR+VVSW +I+ + VD RM+ + M+E N +++
Sbjct: 186 DEMVVRDVVSWNTLISGYCFSGMVDKA----RMVFDGMMEKNLVSWS------------- 228
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
++IS Y + GN+EEA +F NM +++VSWN+MIAGYA
Sbjct: 229 ----------------------TMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYA 266
Query: 314 QHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+ AI+LF +M + + P+ +T + V+S+C H G ++ GK + ++ ++ L
Sbjct: 267 QNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGL 326
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQM 398
+ + D+ + G + EA+ +M
Sbjct: 327 FLGNALADMYAKCGCVLEAKGVFHEM 352
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 109/205 (53%), Gaps = 10/205 (4%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE--WQVD 218
+I IA ++G S + + R + + F P N+ ++ A++ AF+Q W
Sbjct: 54 SIDPNIIAVKFIGVS--SSHGNLRHSVLIFNHFLSFP--NIFAYNALLKAFSQHNAWHTT 109
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+ +++ + P+++TFTS+L AC G + +G+ HC + G S + V NSL+
Sbjct: 110 ISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLV 169
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
+Y K G A +F+ M +D+VSWN++I+GY G+ +A +F+ MM++ + +
Sbjct: 170 DLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNL----V 225
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSM 363
++ +IS G +EE + F++M
Sbjct: 226 SWSTMISGYARVGNLEEARQLFENM 250
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 273 VANSLISMYCKCGNVEEAVYVFNN-MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE--MM 329
+A I + GN+ +V +FN+ + +I ++N+++ ++QH I F ++
Sbjct: 60 IAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVL 119
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
PD TF V+ +C V EG+ + K+G + L + +VDL + G
Sbjct: 120 PNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNC 179
Query: 390 EARDFIKQMPIYPNAVIW 407
A+ +M + + V W
Sbjct: 180 IAQKLFDEM-VVRDVVSW 196
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 205/354 (57%), Gaps = 18/354 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S+I Y K + A +F +M +N +SWT +I+ + Q L+L+ M+NS +E
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P++ + + LSAC GAL QG+ H + + LI MY KCG +EEA+ V
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F N+ K + +W ++I+GYA HG AI F EM K +KP+ ITF V+++C + GLV
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----- 407
EEGK+ F SM + + LKP ++HY C+VDLLGRAGLL+EA+ FI++MP+ PNAVIW
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 408 ------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
E E + ++P +V AN++A + WD+AA R+LMK++G+
Sbjct: 425 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 484
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
PGCS I + + F A D+S+ + +I + +++ GYVPE+ E +D
Sbjct: 485 PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLD 538
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 162 IRTGFIANVYVGSSLITL---YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
++TG + + Y + ++ + + A VF+ + W +I F+ + +
Sbjct: 38 LKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPE 97
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L LY+ M S N +TF S+L AC+ A + H Q ++G+ + + NSLI
Sbjct: 98 RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLI 157
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG---------------------- 316
+ Y GN + A +F+ + D VSWNS+I GY + G
Sbjct: 158 NSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTT 217
Query: 317 ---------LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
+ A+ LF EM V+PD ++ +S+C G +E+GK + K
Sbjct: 218 MISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR 277
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++ + ++D+ + G +EEA + K +
Sbjct: 278 IRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + H++ ++ D L+ A+++C + G +T + +G LI +
Sbjct: 232 LQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDM 291
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + +A +VF+ + ++V +WTA+I+ +A + + M+ ++PN TF
Sbjct: 292 YAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITF 351
Query: 240 TSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
T++L+AC+ +G + +G+ R I+ ++ + + G ++EA M
Sbjct: 352 TAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP 411
Query: 299 GK-DIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
K + V W +++ H + I+L EE+
Sbjct: 412 LKPNAVIWGALLKACRIH----KNIELGEEI 438
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 9/182 (4%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE-- 289
LE N + S L C+ L Q H + ++ G +S +C +
Sbjct: 10 LEHNLYETMSCLQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLS-FCISSTSSDFL 65
Query: 290 --AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
A VF+ D WN MI G++ R++ L++ M+ +A TF ++ +C
Sbjct: 66 PYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKAC 125
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ EE + K G + ++ + +++ G + A ++P P+ V W
Sbjct: 126 SNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSW 184
Query: 408 EA 409
+
Sbjct: 185 NS 186
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 229/411 (55%), Gaps = 21/411 (5%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCG-STRNIRGGAPYQCLAIRTGFIANVYVGS 174
VE+ ++ ++ R ++ + S + + +++C S +++ G + G +N+ + +
Sbjct: 241 VEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVN 300
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
LI +Y KC + +A +FE++ +NVVSW +I + L L+R M S ++P
Sbjct: 301 GLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDP 360
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVY 292
ND TF SIL AC GAL G+ H + + + + SLI MY KCG++ A
Sbjct: 361 NDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKR 420
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F+ M+ K + +WN+MI+G+A HG A+ LF M + PD ITF+GV+++C+H GL
Sbjct: 421 IFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGL 480
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---- 407
+ G+ YF SM + + + P+L HY C++DL GRAGL +EA +K M + P+ IW
Sbjct: 481 LSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLL 540
Query: 408 ---------EAAES----RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
E AES LEPE + +V L+N+YAG W+ A++R + D +K
Sbjct: 541 GACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKK 600
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
PGCS IE+ +VV+ F DK + + +EI +LD + +++ G+VP+ E
Sbjct: 601 VPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSE 651
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 36/284 (12%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK------CRVIID--------- 188
SC R G ++ G N +V +SLI +Y++ R++ D
Sbjct: 137 SCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVS 196
Query: 189 ----------------AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
A ++F+E+PVR+VVSW A+I+ +AQ +V+ + + MR + +
Sbjct: 197 FTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKV 256
Query: 233 EPNDFTFTSILSACTGSG-ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
PN T S+LSAC SG +L G G S I++ N LI MY KCG++EEA
Sbjct: 257 TPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEAS 316
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F + K++VSWN MI GY A+ LF MM+ + P+ +TFL ++ +C + G
Sbjct: 317 NLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLG 376
Query: 352 LVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
++ GK Y D K +K + ++ ++D+ + G L A+
Sbjct: 377 ALDLGKWVHAYVDKNMK-SMKNTVALWTSLIDMYAKCGDLAVAK 419
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 33/251 (13%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F+ + N V W +I + + LE Y M +S EPN++TF SI +CT
Sbjct: 81 ALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTK 140
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN---------------------- 286
+G+ H +++G V SLI+MY + G
Sbjct: 141 IRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTAL 200
Query: 287 ---------VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
++EA +F+ + +D+VSWN+MI+GYAQ G A+ FEEM + +V P+
Sbjct: 201 ITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNV 260
Query: 338 ITFLGVISSC-RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
T L V+S+C + G ++ G + GL + + ++D+ + G LEEA + +
Sbjct: 261 STMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFE 320
Query: 397 QMPIYPNAVIW 407
++ N V W
Sbjct: 321 KIQ-DKNVVSW 330
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC---GNVEEAV 291
+D ++LS C L Q H Q I+ G + + LI +C G++ A+
Sbjct: 27 HDHPSLTLLSNCKTLQTLKQ---IHSQIIKTGLHNTHFALSKLIE-FCAVSPHGDLSYAL 82
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F + + V WN MI G + A++ + M+ +P+ TF + SC
Sbjct: 83 SLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIR 142
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
EGK + K GL+ ++ ++++ + G L AR
Sbjct: 143 GAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNAR 183
>gi|297720639|ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group]
gi|20161229|dbj|BAB90156.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|255673935|dbj|BAH91411.1| Os01g0884800 [Oryza sativa Japonica Group]
Length = 517
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 212/367 (57%), Gaps = 19/367 (5%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
++++V ++L+ Y+K + A VF+EMP R+VV+WT+++ A+ + + YR M
Sbjct: 76 SHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDM 135
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ + ++F ++LS+C GS AL GRS H +R G ++ V NSL+SMY K G++
Sbjct: 136 VAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSL 195
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+A VF+ M + ++W ++I GYAQ+G ++ ++ +M + +PD +TF+G++ +C
Sbjct: 196 RDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFAC 255
Query: 348 RHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP-NAV 405
H GL++ G+ +F SM ++HG+ P DHY+C+VDLLGRAG L EA D + + P +A
Sbjct: 256 SHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDAT 315
Query: 406 IWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMK 448
+W+ AA L+P A +V L+NLY+ R W ARVR LM+
Sbjct: 316 VWKALLAACRTHRNAALAERAAGMVWRLDPTDAMPYVMLSNLYSRARRWGDVARVRALMR 375
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKV 508
+G+ PGCSW+ + V + F A D+ + R +EI + + +++ G+VP+
Sbjct: 376 SRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHVPDTEWALQ 435
Query: 509 DDASHKR 515
D+A R
Sbjct: 436 DEAPEGR 442
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 233/452 (51%), Gaps = 65/452 (14%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
R+K + + + +C +R G L ++ GF + +V S+L+ +Y C V+ DA
Sbjct: 117 RVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDA 176
Query: 190 Y-----------------------------------------------KVFEEMPVRNVV 202
Y +F+EMP R+VV
Sbjct: 177 YSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVV 236
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SW +I+ +AQ + L++ M++S ++PN T S+L A GAL G+ H
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYA 296
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
+ + ++L+ MY KCG++++A+ VF + ++ ++W+++I +A HG A AI
Sbjct: 297 GKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAI 356
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDL 381
F M K V P+ + ++G++S+C H GLVEEG+ +F M K GL+P ++HY C+VDL
Sbjct: 357 IHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDL 416
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATH 424
LGRAG LEEA + I+ MPI P+ VIW+A AE+ + L P + ++
Sbjct: 417 LGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSY 476
Query: 425 VQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEIL 484
V L+NLYA + W+ ARVR MK ++ +PGCSWIEI +++ F ED S+++ EI
Sbjct: 477 VALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQ 536
Query: 485 PVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
+L + ++++ GY P E ++ +R
Sbjct: 537 AMLGEMSMKLRSNGYRPNTLEVFLNTDEQERA 568
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 60/326 (18%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID-AYKVFEEM 196
LS TSC + R+++ + I+TG I + + +I + ID A VF +M
Sbjct: 22 LSKPFTSCKTPRDLK---QLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQM 78
Query: 197 PVRNVVSWTAIIAAFAQ----EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
P N W I+ A+ Q + + M+ + ++PN FTF S+L AC + L
Sbjct: 79 PEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRL 138
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKC---------------------------- 284
+G+ H ++ GF V ++L+ MY C
Sbjct: 139 REGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKR 198
Query: 285 -------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G+++ A +F+ M + +VSWN MI+GYAQ+G + AI+LF
Sbjct: 199 KQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLF 258
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY--SCVVDLLG 383
+EM + P+ +T + V+ + G +E GK K+ K E+D S +VD+
Sbjct: 259 QEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN--KVEIDDVLGSALVDMYS 316
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G +++A + +P NA+ W A
Sbjct: 317 KCGSIDKALQVFETLP-KRNAITWSA 341
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 201/348 (57%), Gaps = 19/348 (5%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C S N+R G +++G + V L+ +Y++ A VFE++ R+ SW
Sbjct: 464 CTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSW 523
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
T I++ +A+ + + +E +R M + P+D T LS C+ +LG G H I+
Sbjct: 524 TVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIK 583
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G+ S + V+ +L+ MY KCGN+ +A +F+ +D V+WN++I GY+QHG +A+D
Sbjct: 584 SGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDA 642
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLG 383
F++M+ + +PD ITF+GV+S+C H GL+ EG+ YF S++ +G+ P ++HY+C+VD+L
Sbjct: 643 FKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILS 702
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQ 426
+AG L EA I QMP+ P++ IW AAE LEP A++ +
Sbjct: 703 KAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSIL 762
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
L+N+YA + W RVR ++ D G+K PGCSWIEI ++ F ++D
Sbjct: 763 LSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 139/276 (50%), Gaps = 5/276 (1%)
Query: 122 MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
+H H E L++ A+ A+ C R +R G +R+ + ++ SL+ +Y
Sbjct: 41 LHTVAHAEELRLHAA----ALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYC 96
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
KC ++DA +VF+ MP R++V+WTA+I+A D L+++ M + PN FT S
Sbjct: 97 KCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLAS 156
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+L AC+G H Q +++ V +SL+ Y CG ++ A V + +
Sbjct: 157 VLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERS 216
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
VSWN+++ GYA+HG R + + E+++ + T V+ C GL + G+
Sbjct: 217 DVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHA 276
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARD-FIK 396
S+ K GL+ + SC+V++ R EEA + FI+
Sbjct: 277 SVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIR 312
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 183/439 (41%), Gaps = 33/439 (7%)
Query: 30 SFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFN 89
S + +L ++ ++ L L + R E+H RL++ L D+ LDS
Sbjct: 35 SHANARLHTVAHAEELRLHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDS--LL 92
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVV-------------DVEKLISMHHDLHRERLKVDAS 136
+ + + VFD + +V D ++ + M +++E + +
Sbjct: 93 NMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGF 152
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
L++ + +C + + ++ + + YVGSSL+ Y+ C + A V +
Sbjct: 153 TLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGL 212
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P R+ VSW A++ +A+ + + + S E + +T ++L C G G+
Sbjct: 213 PERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQ 272
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
S H I+ G + + + L+ MY +C + EEA VF + D+V ++MI+ + +H
Sbjct: 273 SVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHD 332
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+A A+DLF +M VKP+ F+G+ G + + K G
Sbjct: 333 MAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGF-------- 384
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRC 436
+L+ D I M + AV L+ EP+ + + L+ Y+G C
Sbjct: 385 ---------AMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNC 435
Query: 437 WDQAARVRKLMKDKGLKTN 455
+Q R+ K M +G N
Sbjct: 436 -EQGLRIFKQMACEGFSAN 453
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 120/261 (45%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L T + C + G I+ G + + S L+ +YS+C +AY+VF +
Sbjct: 255 LPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRID 314
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VV +A+I+ F + L+L+ M ++PN + F I + +G RS
Sbjct: 315 EPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRS 374
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++ GF V +++++MY K G V++A F+ +H D SWN++++ +
Sbjct: 375 VHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSN 434
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ + +F++M + + T++ V+ C + G + K GL+ + D
Sbjct: 435 CEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRM 494
Query: 378 VVDLLGRAGLLEEARDFIKQM 398
+VD+ ++G A +Q+
Sbjct: 495 LVDMYAQSGCFTSACLVFEQL 515
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+++GF VG +++ +Y K + DA F+ + + SW I++AF + L
Sbjct: 380 VKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGL 439
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+++ M N +T+ S+L CT L G H ++ G + V+ L+ MY
Sbjct: 440 RIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMY 499
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+ G A VF + +D SW +++GYA+ A + ++ F M+++ ++P T
Sbjct: 500 AQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLA 559
Query: 342 GVISSC 347
+S C
Sbjct: 560 VSLSVC 565
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 228/437 (52%), Gaps = 55/437 (12%)
Query: 134 DASFLSTAVT------SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
D L T VT +C +++R G +N+ + +++I +Y+ C +
Sbjct: 212 DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMD 271
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC--------------------------- 220
A +F M R+++SWT I++ F ++D+
Sbjct: 272 SALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNR 331
Query: 221 ----LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
LEL+R M+ + ++P++FT S+L+AC GAL G R + + V N+
Sbjct: 332 FKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 391
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI MY KCG+V++A +F M +D +W +MI G A +G +A+D+F M+K + PD
Sbjct: 392 LIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPD 451
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
IT++GV+S+C H GLV++G+ YF M ++HG++P + HY C+VDLL RAG L+EA + I
Sbjct: 452 EITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVI 511
Query: 396 KQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWD 438
+ MPI N+++W A + L LEP+ A +V L N+YA + W+
Sbjct: 512 ENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWN 571
Query: 439 QAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
+R++M DKG+K PGCS IE+ V+ F A D+S+ + I LD + +K G
Sbjct: 572 DLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAG 631
Query: 499 YVPEVHEEKVDDASHKR 515
Y P++ E +D A +
Sbjct: 632 YSPDISEVFLDIAEEDK 648
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 33/286 (11%)
Query: 146 GSTRNI--RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
G TR+I G ++ G NV+V ++L+ +Y C + A VF+ P +V++
Sbjct: 127 GFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVIT 186
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W II+A+ + + + L+ +M + + P T +LSAC+ L G+ H
Sbjct: 187 WNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK 246
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS---------------- 307
S + + N++I MY CG ++ A+ +F +M+ +DI+SW +
Sbjct: 247 NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARN 306
Query: 308 ---------------MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
MI GY + A++LF M VKPD T + V+++C H G
Sbjct: 307 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 366
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+E G+ + ++ +K +L + ++D+ + G +++A ++M
Sbjct: 367 LELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREM 412
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 8/246 (3%)
Query: 158 QCLAIRTGFIANVYVGSSLITL-----YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
C AI+ G AN + + ++T Y + A ++F+E+P N+ W +I ++
Sbjct: 38 HCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY---ARRLFDEIPEPNLFIWNTMIRGYS 94
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + + LY M ++P+ +TF + T AL GR H ++ G +
Sbjct: 95 RLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVF 154
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V +L+ MY CG ++ A VF+ D+++WN +I+ Y + G + LF M ++
Sbjct: 155 VHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQ 214
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
V P +T + V+S+C + GK + ++ L + ++D+ G ++ A
Sbjct: 215 VLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSAL 274
Query: 393 DFIKQM 398
+ M
Sbjct: 275 GIFRSM 280
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 123/262 (46%), Gaps = 21/262 (8%)
Query: 92 FTGTNSTFGSSNVFDQLLD------TPVVD-------VEKLISMHHDLHRERLKVDASFL 138
FT + N FD++ + T ++D ++ + + ++ +K D +
Sbjct: 295 FTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTM 354
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ +T+C + G + R +++V ++LI +Y KC + A +F EM
Sbjct: 355 VSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQ 414
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+ +WTA+I A + L+++ M + + P++ T+ +LSACT +G + +GR
Sbjct: 415 RDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKY 474
Query: 259 HCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHG 316
+ T + G I L+ + + G ++EA V NM K + + W +++AG +
Sbjct: 475 FLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVY- 533
Query: 317 LAVRAIDLFEEMMKQ--RVKPD 336
R D+ E ++KQ ++PD
Sbjct: 534 ---RESDMAEMVVKQILELEPD 552
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC--KCGNVEE 289
P S+L C ++ Q + HCQ I+ G + + N +++ C + G+ +
Sbjct: 14 FSPPTHPLISLLETCE---SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 70
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A +F+ + ++ WN+MI GY++ + L+ EM+++ VKPD TF +
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+E G+ + KHGL+ + ++ +V + G L+ AR P + + W
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP-KADVITW 187
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 219/404 (54%), Gaps = 19/404 (4%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D+ L + +C + + G AIR+ F V +SLIT+YS+C+ + AY +
Sbjct: 409 LDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLL 468
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+ M ++++SW +II+ + + L R M S +EPN T S+L C L
Sbjct: 469 FQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANL 528
Query: 253 GQGRSAHC-QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
G+ HC T R F ++ + N+L+ MY + G V EA VF+ + +D +++ SMIAG
Sbjct: 529 QHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAG 588
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKP 370
Y G A+ LFEEM ++KPD IT + V+S+C H GLV +G++ F+ M + +GL P
Sbjct: 589 YGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTP 648
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
L+H++C+ DL GRAGLL +A++ I+ MP P +W AAE
Sbjct: 649 HLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKL 708
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
L ++PE +V +AN+YA CW++ A+VR M+D G++ PGC+W+++ F +
Sbjct: 709 LEMKPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVGTGFSPFLVD 768
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
D SN EI P+L+ L +K GY+ D+ S + E
Sbjct: 769 DTSNANADEIYPLLEGLTMVIKEAGYISSEDFGSGDETSGEFNE 812
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 11/282 (3%)
Query: 119 LISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
LI +H + L V +S+ ++SC +++ G I GF + + L+T
Sbjct: 160 LIRLHASSASQDLIVHP--ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVT 217
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
YS +++DA+ + E + + W +I+++ + L Y+ M + P++FT
Sbjct: 218 FYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFT 277
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNM 297
+ S+L AC LG G+ H ++I + + V N+LISMY KCG V A +F+ +
Sbjct: 278 YPSVLKACGEELDLGFGKEVH-ESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKI 336
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D VSWNSMI+ YA G+ A +LF M + ++ + I + + G +
Sbjct: 337 PERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGAL 396
Query: 358 VYFDSMAKHGLKPELDHYSCVVDL-----LGRAGLLEEARDF 394
M K G LD + ++ L +G A L +E F
Sbjct: 397 ELLSQMRKXG--SHLDSVALIIGLGACSHIGDAKLGKEIHSF 436
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 104/216 (48%), Gaps = 18/216 (8%)
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S+LS+CT +L +GR H I +GF + + L++ Y + +A + N +
Sbjct: 178 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 237
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
WN +I+ Y ++G +A+ +++M+K+ ++PD T+ V+ +C + GK
Sbjct: 238 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 297
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPE 419
+S+ +K L ++ ++ + G+ G + ARD ++P +AV W +
Sbjct: 298 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIP-ERDAVSWNS---------- 346
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ ++YA + W++A + M + ++ N
Sbjct: 347 -------MISVYASMGMWNEAFELFGSMWAEDIELN 375
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 220/395 (55%), Gaps = 25/395 (6%)
Query: 126 LHRERLKVDASFLSTAVTSC-GSTRNIRGGAPYQCLAIRT----GFIANVYVGSSLITLY 180
+ + ++ DA +S+ + C G G C ++ G ++V++G LI +Y
Sbjct: 219 MQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMY 278
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTF 239
S+ ++ +VF+ M RNV SWTA+I + + D L L+R M+ +EPN +
Sbjct: 279 SRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSL 338
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF-NNMH 298
S+L AC+ L GR H +R + + + N+LI MY KCG+++ A VF ++
Sbjct: 339 VSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSL 398
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG-K 357
KD +SW+SMI+GY HG AI L+++M++ ++PD IT +G++S+C GLV EG
Sbjct: 399 CKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLN 458
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES----- 412
+Y + +G++P L+ ++C+VD+LGRAG L+ A DFIK MP+ P +W A S
Sbjct: 459 IYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIH 518
Query: 413 ----------RLL--LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
R L LEPE + +V ++NLYA R WD A VR++MKDK L+ PGCSW
Sbjct: 519 GDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSW 578
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
I I N + F DK++ + I +LD L+ M
Sbjct: 579 ISINNKTHCFYVADKAHPSATSIYNMLDDLLLTMN 613
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 131/258 (50%), Gaps = 9/258 (3%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM- 219
+IR GF+++ V +S++++Y KC ++ KVF+EM +RN SW +IA +A +
Sbjct: 150 SIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFR 209
Query: 220 --CLELYRMMRNSMLEPNDFTFTSILSACTGS-GALGQGRSAHCQTIR----MGFFSYIQ 272
E + M+ + P+ +T +S+L C G G GR HC ++ +G S +
Sbjct: 210 EETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVH 269
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQ 331
+ LI MY + V VF+ M +++ SW +MI GY ++G + A+ LF +M +
Sbjct: 270 LGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVID 329
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
++P+ ++ + V+ +C + G+ + L E+ + ++D+ + G L+ A
Sbjct: 330 GIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSA 389
Query: 392 RDFIKQMPIYPNAVIWEA 409
R + + +A+ W +
Sbjct: 390 RRVFEDDSLCKDAISWSS 407
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 9/253 (3%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
G N + + LI Y+ C+ + VF+ + +NV W ++I +A+ + +L+
Sbjct: 53 GLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLF 112
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M +S + P+DFT +++ + GAL G+S H ++IR+GF S VANS++SMYCKC
Sbjct: 113 NQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKC 172
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQRVKPDAITFL 341
GN EE+ VF+ M ++ SWN +IAGYA G + ++M V+PDA T
Sbjct: 173 GNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTIS 232
Query: 342 GVISSCR-HGGLVEEGKVYFDSMAKH----GLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
++ C G + G+ + K+ GL ++ C++D+ R+ + R
Sbjct: 233 SLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFD 292
Query: 397 QMPIYPNAVIWEA 409
+M N W A
Sbjct: 293 RMKCR-NVFSWTA 304
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R +H + + +G +A LI Y C + + VF+++ K++ WNS+I GYA++
Sbjct: 43 RQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKN 102
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
L A LF +M V PD T + G + GK + G +
Sbjct: 103 RLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVA 162
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPI 400
+ ++ + + G EE+R +M I
Sbjct: 163 NSIMSMYCKCGNFEESRKVFDEMTI 187
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 209/383 (54%), Gaps = 25/383 (6%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
FL A +C +T+ G I+ G +VYV ++L+ Y C+ I+DA KVF+EM
Sbjct: 769 FLLKACAACFATKE---GKQVHVEVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFDEM 825
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P R VVSW A+I + + ++ + + MR+ EP+ T +L C G LG GR
Sbjct: 826 PERTVVSWNAVITSCVESLKLGEAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGR 885
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H Q I G Q+ +L+ MY K G V A VF+ M K++ +W++MI G AQHG
Sbjct: 886 WIHSQVIERGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMKEKNVWTWSAMILGLAQHG 945
Query: 317 LAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDH 374
A ++LF +MM+ + P+ +TFLGV+ +C H GLV +G YF M +G+KP + H
Sbjct: 946 FAKEGLELFLDMMRSSLIHPNYVTFLGVLCACSHAGLVSDGFRYFHEMGHTYGIKPMMVH 1005
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES-------------------RLL 415
Y +VD+LGRAGLL+EA +FI +MP P+ ++W S RLL
Sbjct: 1006 YGAMVDILGRAGLLKEAYNFITKMPFQPDPIVWRTLLSACSIHDVKDSTGVAYKVRKRLL 1065
Query: 416 -LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
LEP + V +AN+YA W++AA+VR++M+D GLK G S +E+ ++RF +
Sbjct: 1066 ELEPRRSGNFVMVANMYADAGMWEKAAKVRRVMRDGGLKKKAGESCVELSGSIHRFFSGY 1125
Query: 475 KSNTRLSEILPVLDFLVDQMKTL 497
S + +LD L M+ +
Sbjct: 1126 DSQDDKEGMYQLLDGLNLHMQMM 1148
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
+ W +I +A L +YR MRN + PN TF +L AC A +G+ H +
Sbjct: 730 LPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGKQVHVE 789
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
I+ G + V N+L++ Y C + +A VF+ M + +VSWN++I + A
Sbjct: 790 VIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFDEMPERTVVSWNAVITSCVESLKLGEA 849
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
I F +M +PD T + ++ C G + G+ + + GL + +VD+
Sbjct: 850 IRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGRWIHSQVIERGLVLNYQLGTALVDM 909
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++G + A+ +M N W A
Sbjct: 910 YAKSGAVGYAKLVFDRMK-EKNVWTWSA 936
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 245/464 (52%), Gaps = 25/464 (5%)
Query: 74 DFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDT-PVVDVEKLISMHHDLHRERLK 132
D ++Q+ + N ++ + + +LD P ++K I L
Sbjct: 101 DMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLI 160
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+FL+ +C R + G L IR+GF +V V + +I +Y KC+ + A V
Sbjct: 161 TFCAFLN----ACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMV 216
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F M RN VSW ++AA Q + + ++ M R +E D+ +S++SA G L
Sbjct: 217 FNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGL 276
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
GRS H ++ I V ++L+ MY KCG++E+ VF+ M +++VSWN+MI+GY
Sbjct: 277 EFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGY 336
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPE 371
A G A+ LFEEM + V + +T + V+S+C GG V+ G F+SM ++ ++P
Sbjct: 337 AHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPG 395
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRL 414
+HY+C+ D+LGRAG++E A +F+++MPI P +W AA++
Sbjct: 396 AEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLF 455
Query: 415 LLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
L+P+ + HV L+N++A WD+A VRK MKD G+K GCSW+ N V+ F+A+D
Sbjct: 456 KLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKD 515
Query: 475 KSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD-DASHKRTE 517
S+ R SEI +L L +M+ GY+P+ + D + K TE
Sbjct: 516 TSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTE 559
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 1/256 (0%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G +A++ G I + +VG S +YSK + +A ++F+EMP RNV W A I+
Sbjct: 77 GKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVL 136
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ + ++ + R EP+ TF + L+AC + L GR H IR GF + V
Sbjct: 137 DGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSV 196
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
AN +I +Y KC VE A VFN M ++ VSW +M+A Q+ +A +F K+ +
Sbjct: 197 ANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGI 256
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+ VIS+ +E G+ K ++ ++ S +VD+ G+ G +E+
Sbjct: 257 ELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQ 316
Query: 394 FIKQMPIYPNAVIWEA 409
+MP N V W A
Sbjct: 317 VFHEMP-ERNLVSWNA 331
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+YSK + A + + P R VV+WTA+I+ Q L + MR ++PNDFT
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F A T G+ H +++G + V S MY K G EA +F+ M
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++ WN+ I+ G +AID F E + +PD ITF +++C ++ G+
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + G + ++ + ++D+ G+ +E A M N+V W
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMG-RRNSVSW 228
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 225/387 (58%), Gaps = 19/387 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L + +C +++ G + ++ G +++ +V +SL+ +Y+KC V+ DA ++F
Sbjct: 100 DNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLF 159
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
E M +++V+WT +I A+A + L L+ MR + P+ ++++AC GA+
Sbjct: 160 ERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMH 218
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
+ R A+ +R GF + + ++I MY KCG+VE A VF+ M K+++SW++MIA Y
Sbjct: 219 RARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYG 278
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPEL 372
HG AIDLF M+ + P+ +TF+ ++ +C H GL+EEG +F+SM +H ++P++
Sbjct: 279 YHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDV 338
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLL 415
HY+C+VDLLGRAG L+EA I+ M + + +W +AA S L
Sbjct: 339 KHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLE 398
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
L+P+ +V L+N+YA W++ A+ R +M + LK PG +WIE+ N Y+F D+
Sbjct: 399 LQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDR 458
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPE 502
S+ + EI +L L+ +++ GYVP+
Sbjct: 459 SHPQSKEIYEMLMSLIKKLEMAGYVPD 485
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 125/248 (50%), Gaps = 2/248 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ G + ++ + + L+ Y++ + I DAY +F+ + +R+ +W+ ++ FA+ C
Sbjct: 27 VANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCY 86
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+R + + P+++T ++ C L GR H ++ G S V SL+ MY
Sbjct: 87 ATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMY 146
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KC VE+A +F M KD+V+W MI YA A ++ LF+ M ++ V PD + +
Sbjct: 147 AKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVPDKVAMV 205
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V+++C G + + D + ++G ++ + ++D+ + G +E AR+ +M
Sbjct: 206 TVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMK-E 264
Query: 402 PNAVIWEA 409
N + W A
Sbjct: 265 KNVISWSA 272
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H + G + +AN L+ Y + +++A +F+ + +D +W+ M+ G+A+
Sbjct: 20 RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G F E+++ V PD T VI +CR ++ G+V D + KHGL DH+
Sbjct: 80 GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLS--DHF 137
Query: 376 SC--VVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
C +VD+ + ++E+A+ ++M + + V W
Sbjct: 138 VCASLVDMYAKCIVVEDAQRLFERM-LSKDLVTW 170
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 225/448 (50%), Gaps = 32/448 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VF ++ D VV +I+ + ++ E + D ++ + C R
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G +++V ++L+ +Y+KC + +A VF EM V++++SW II
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 211 FAQEWQVDMCLELYRMM-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+++ + L L+ ++ P++ T +L AC A +GR H +R G+FS
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
VANSL+ MY KCG + A +F+++ KD+VSW MIAGY HG AI LF +M
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLL 388
+ ++ D I+F+ ++ +C H GLV+EG +F+ M ++P ++HY+C+VD+L R G L
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 389 EEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLY 431
+A FI+ MPI P+A IW A AE LEPE +V +AN+Y
Sbjct: 653 IKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 712
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A W+Q R+RK + +GL+ NPGCSWIEI V F A D SN I L +
Sbjct: 713 AEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVR 772
Query: 492 DQMKTLGYVPEVHEEKVDDASHKRTEPF 519
+M GY P +D ++ E
Sbjct: 773 ARMIEEGYSPLTKYALIDAEEMEKEEAL 800
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 193/396 (48%), Gaps = 28/396 (7%)
Query: 33 SQKLKQISSSKSLHKALRVLDI-----ISPRTRDS-------TKTEVHLRLIQDFLQTDS 80
+ +L++ S +L A+++L + I PRT S +K+ + + +F++ +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNG 124
Query: 81 KHLDSQ---KFNHDFTGTNSTFGSSNVFDQLLDTPVV-------------DVEKLISMHH 124
+DS K + +T +S VFD++ + D I +
Sbjct: 125 FVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFK 184
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
+ +++D+ S S S R++ GG +++GF VG+SL+ Y K +
Sbjct: 185 KMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQ 244
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ A KVF+EM R+V+SW +II + + L ++ M S +E + T S+ +
Sbjct: 245 RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
C S + GR+ H ++ F + N+L+ MY KCG+++ A VF M + +VS
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS 364
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
+ SMIAGYA+ GLA A+ LFEEM ++ + PD T V++ C L++EGK + +
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
++ L ++ + ++D+ + G ++EA +M +
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 221/375 (58%), Gaps = 24/375 (6%)
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
S+R+I G +C F+ ++ +G+++I +Y+K I A KVFE +PV++V+SW +
Sbjct: 359 SSRSIHGFVTRRCW-----FLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNS 413
Query: 207 IIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
+I ++Q + +++Y MR S PN T+ SIL+A + GAL QG AH Q I+
Sbjct: 414 LITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKN 473
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
+ I V+ L+ MY KCG + +A+ +F + + VSWN++I+ + HG ++A+ LF
Sbjct: 474 FLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLF 533
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
+EM + VKPD ITF+ ++S+C H GLV+EG+ F M + +G++P L HY C+VDL GR
Sbjct: 534 KEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGR 593
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQL 427
AG LE+A +F+K MP+ P+ +W A ++ L +E E +V L
Sbjct: 594 AGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLL 653
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N+YA + W+ VR L +D+GLK PG S IE+ + F ++++ + EI L
Sbjct: 654 SNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSEL 713
Query: 488 DFLVDQMKTLGYVPE 502
L +MK++GYVP+
Sbjct: 714 RNLTAKMKSIGYVPD 728
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 154/326 (47%), Gaps = 31/326 (9%)
Query: 105 FDQLLDTPVVDVEKLISMHHDLHRERLKVDA--SFLSTA------------VTSCGSTRN 150
FDQ+ V +IS + + VD FLST+ + +CG N
Sbjct: 98 FDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACG---N 154
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G CL ++ GF +VY+ +S I YS+ + A +F+ M +R++ +W A+I+
Sbjct: 155 LDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISG 214
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
F +V LE++ MR + + T +S+L C + G H I++G
Sbjct: 215 FYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFD 274
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ V N+LI+MY K G + A +FN M +DIVSWNS++A + Q+ V A+ ++ +M
Sbjct: 275 LFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHS 334
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP-------ELDHYSCVVDLLG 383
V PD +T + + S + E + S + HG ++ + ++D+
Sbjct: 335 IGVVPDLLTLVSLAS------VAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYA 388
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G ++ AR + +P+ + + W +
Sbjct: 389 KLGFIDSARKVFEGLPV-KDVISWNS 413
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 125/244 (51%), Gaps = 4/244 (1%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
L + +G ++++ + LI Y+ I A F+++ ++V +W ++I+A+A+
Sbjct: 63 HALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHF 122
Query: 218 DMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
++ + + S L+ + +TF ++ AC G L GR HC +++GF + +A S
Sbjct: 123 HAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYIAAS 179
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
I Y + G V A +F+NM +DI +WN+MI+G+ +G A+++F+EM + V D
Sbjct: 180 FIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMD 239
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
++T ++ C + G + K GL+ +L + ++++ + G L A
Sbjct: 240 SVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFN 299
Query: 397 QMPI 400
QM +
Sbjct: 300 QMKV 303
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 8/190 (4%)
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
E + F I CT + + H + G I ++ LI+ Y G++ A
Sbjct: 40 EKREIDFNRIFLYCT---KVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARL 96
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHGG 351
F+ + KD+ +WNSMI+ YA+ G A+D F E + ++ D TF VI +C G
Sbjct: 97 TFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---G 153
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAE 411
+++G+ + K G + ++ + + R G + A + M I + W A
Sbjct: 154 NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMI-RDIGTWNAMI 212
Query: 412 SRLLLEPECA 421
S L + A
Sbjct: 213 SGFYLNGKVA 222
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 215/387 (55%), Gaps = 17/387 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+K D L + + + ++++ G ++ G + SL T+Y+KC + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F++M N++ W A+I+ +A+ ++++ M N + P+ + TS +SAC G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+L Q RS + R + + ++++LI M+ KCG+VE A VF+ +D+V W++MI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY HG A AI L+ M + V P+ +TFLG++ +C H G+V EG +F+ MA H + P
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINP 457
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
+ HY+CV+DLLGRAG L++A + IK MP+ P +W AA+
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQL 517
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
++P +VQL+NLYA R WD+ A VR MK+KGL + GCSW+E+ + FR
Sbjct: 518 FSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVG 577
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYV 500
DKS+ R EI ++++ ++K G+V
Sbjct: 578 DKSHPRYEEIERQVEWIESRLKEGGFV 604
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 190/371 (51%), Gaps = 18/371 (4%)
Query: 54 IISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPV 113
+I T + ++H RL+ LQ S L ++ + + + TF + VFD L +
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQF-SGFLITKLIHASSSFGDITF-ARQVFDDLPRPQI 84
Query: 114 VDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCL 160
+I M+ ++ R+ D+ + +C +++ G
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVD 218
R GF A+V+V + LI LY+KCR + A VFE +P+ R +VSWTAI++A+AQ +
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
LE++ MR ++P+ S+L+A T L QGRS H ++MG + SL
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
+MY KCG V A +F+ M +++ WN+MI+GYA++G A AID+F EM+ + V+PD I
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ IS+C G +E+ + ++ + + + ++ S ++D+ + G +E AR +
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR-LVFDR 383
Query: 399 PIYPNAVIWEA 409
+ + V+W A
Sbjct: 384 TLDRDVVVWSA 394
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 213/419 (50%), Gaps = 60/419 (14%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
A L+ ++ C + G ++ GF ++ ++LITLY K + DA K+F
Sbjct: 275 AEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFH 334
Query: 195 EMPVRNVVSWTAIIAAFAQE----------------------------WQVDMC------ 220
EM V+N+VSW A+I++FA+ W +C
Sbjct: 335 EMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKG 394
Query: 221 -----LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
LE++R M+ + ++ N T S+LS C AL GR H IR + V N
Sbjct: 395 LGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGN 454
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
LI+MY KCG+ + VF + +D +SWNSMIAGY HGL A+ F M+K +P
Sbjct: 455 GLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRP 514
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDF 394
D +TF+ +S+C H GLV EG F M ++ ++PE++HY+C+VDLLGRAGL+EEA +
Sbjct: 515 DGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNI 574
Query: 395 IKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCW 437
IK MP+ PNA IW EAA L + +H+ L+N++A W
Sbjct: 575 IKGMPMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHMLLSNIFAASCRW 634
Query: 438 DQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE---DKSNTRLSEILPVLDFLVDQ 493
+ +ARVR + KGLK PG SWIE+ VY F+A + ++ EIL L F ++
Sbjct: 635 EDSARVRISARAKGLKKVPGWSWIEVKKKVYMFKAGYTISEGLEKVDEILHDLAFQIEN 693
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 119/223 (53%), Gaps = 3/223 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR---NVVSWTAIIAAFAQEWQVD 218
+ TG + +V + L+++YS+ ++ DA KVF P N + W +II A
Sbjct: 62 VVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANVYHGYCI 121
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L+LY MRN + + FTF +L A + GA ++ HC ++ GF +++ V N LI
Sbjct: 122 EALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELI 181
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY K +++A VF+ M K +VSWN+M++GYA + A +F +M + V+P+ +
Sbjct: 182 GMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPV 241
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
T+ ++SS G +EE V F M G+ P + + V+ +
Sbjct: 242 TWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSV 284
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 122/245 (49%), Gaps = 39/245 (15%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C ++ GF +++VG+ LI +Y+K + DA KVF++M +++VVSW +++ +A + V
Sbjct: 162 HCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDV 221
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSA-------------------------------- 245
+ ++ M +EPN T+TS+LS+
Sbjct: 222 NGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVV 281
Query: 246 ---CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
C L G+ H ++ GF Y+ N+LI++Y K G V +A +F+ M K++
Sbjct: 282 LSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNL 341
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQ----RVKPDAITFLGVISSCRHGGLVEEGKV 358
VSWN++I+ +A+ G+ +A++L ++ K +KP+ IT+ +I GL EE
Sbjct: 342 VSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLE 401
Query: 359 YFDSM 363
F M
Sbjct: 402 VFRKM 406
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + +K ++ +++ ++ C + G IR NV VG+ L
Sbjct: 397 EESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGL 456
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC + VFE++ R+ +SW ++IA + L + M S P+
Sbjct: 457 INMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDG 516
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN--SLISMYCKCGNVEEAVYVF 294
TF + LSAC+ +G + +G Q +R F ++ + ++ + + G VEEA +
Sbjct: 517 VTFIAALSACSHAGLVAEGHWLFSQ-MRQNFKIEPEIEHYACMVDLLGRAGLVEEASNII 575
Query: 295 NNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEE 327
M + + W+S++ H + DL EE
Sbjct: 576 KGMPMEPNAYIWSSLLNSCRMH----KDTDLAEE 605
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 26/233 (11%)
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
DF F +L C G + + H T+ G + V+ L+S+Y + G V +A VF
Sbjct: 39 DF-FDHLLRQCNG---IQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFG 94
Query: 296 NMHGK---DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+ + + + WNS+I HG + A+ L+ +M V D TF ++ + + G
Sbjct: 95 SAPFECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGA 154
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
K + + G + L + ++ + + +++AR +M I + V W
Sbjct: 155 FNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRI-KSVVSWNT--- 210
Query: 413 RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
+ + YA + A+R+ M+ +G++ NP +W +++
Sbjct: 211 --------------MVSGYAYNYDVNGASRMFHQMELEGVEPNP-VTWTSLLS 248
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 218/433 (50%), Gaps = 53/433 (12%)
Query: 117 EKLISMHHDL-HRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
++ +SM DL E ++ D+ L + + +C ++R G A+ G N +VG +
Sbjct: 258 DEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGA 317
Query: 176 LITLYSKCRVIIDAYKVFEEMPVR-----------------------------------N 200
L+ +YSKC + A F+ + R N
Sbjct: 318 LVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPN 377
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V +W II+ + ++ L L+ M+ S L P+ +T IL AC + +G+ H
Sbjct: 378 VYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHA 437
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
+IR G+ + + +L+ MY KCG+++ A+ V+N + ++VS N+M+ YA HG
Sbjct: 438 HSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDE 497
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
I LF M+ +PD +TFL V+SSC H G VE G +FD M + + P L HY+C+VD
Sbjct: 498 GIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVD 557
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAAT 423
LL RAG L+EA + +K++P P++V+W AAES + LEP
Sbjct: 558 LLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGN 617
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
+V LANLYA W R R+++KD+G+ +PGCSWIE ++ F + DKS+ + +I
Sbjct: 618 YVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDI 677
Query: 484 LPVLDFLVDQMKT 496
LD L M+T
Sbjct: 678 YTTLDNLNTHMRT 690
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 33/290 (11%)
Query: 90 HDFT----GTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERL--KVDASFLSTAVT 143
HDF TN +F S N Q + L + H H L ++D+S ++ +
Sbjct: 19 HDFNVPRKPTNLSFQSPNSTPQSM--------HLSTAAHHTHLSLLDKQIDSSTYASLLE 70
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
SC R + G ++TGF + +V + L+ +Y + + DA VF +MP RN+ S
Sbjct: 71 SC---RTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYS 127
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WTAI++ + L L+ ++ + F F +L C G L GR H I
Sbjct: 128 WTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVI 187
Query: 264 R----MG----FFSYIQVA-----NSLISMYCKCGNVEEAVYVFNNMH--GKDIVSWNSM 308
+ MG FS V N++I YC+ GNVE+A +F+ M GKD +SWNSM
Sbjct: 188 KRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSM 247
Query: 309 IAGYAQHGLAVRAIDLFEE-MMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
I+GYA + L A+ +F + +M++ ++ D+ T V+++C + GK
Sbjct: 248 ISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGK 297
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 128/272 (47%), Gaps = 16/272 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGS------TRNIRGGAPYQC------LAIRT 164
E+ +S+ L + + ++ + CG R + G +C L I +
Sbjct: 142 EEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFS 201
Query: 165 GF-IANVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCL 221
GF + NV +++I Y + + A ++F++M + ++ +SW ++I+ +A D L
Sbjct: 202 GFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEAL 261
Query: 222 ELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++R ++ +E + FT S+L+AC +L +G+ H Q + G V +L+ M
Sbjct: 262 SMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEM 321
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KC +++ A F+ + +D +WN +I+GYA +L ++M +P+ T+
Sbjct: 322 YSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTW 381
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
G+IS G E F M L+P++
Sbjct: 382 NGIISGHVENGHNELALRLFTEMQTSSLRPDI 413
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 228/437 (52%), Gaps = 55/437 (12%)
Query: 134 DASFLSTAVT------SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
D L T VT +C +++R G +N+ + +++I +Y+ C +
Sbjct: 233 DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMD 292
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC--------------------------- 220
A +F M R+++SWT I++ F ++D+
Sbjct: 293 SALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNR 352
Query: 221 ----LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
LEL+R M+ + ++P++FT S+L+AC GAL G R + + V N+
Sbjct: 353 FKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 412
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI MY KCG+V++A +F M +D +W +MI G A +G +A+D+F M+K + PD
Sbjct: 413 LIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPD 472
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
IT++GV+S+C H GLV++G+ YF M ++HG++P + HY C+VDLL RAG L+EA + I
Sbjct: 473 EITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVI 532
Query: 396 KQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWD 438
+ MPI N+++W A + L LEP+ A +V L N+YA + W+
Sbjct: 533 ENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWN 592
Query: 439 QAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
+R++M DKG+K PGCS IE+ V+ F A D+S+ + I LD + +K G
Sbjct: 593 DLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAG 652
Query: 499 YVPEVHEEKVDDASHKR 515
Y P++ E +D A +
Sbjct: 653 YSPDISEVFLDIAEEDK 669
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 33/286 (11%)
Query: 146 GSTRNI--RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
G TR+I G ++ G NV+V ++L+ +Y C + A VF+ P +V++
Sbjct: 148 GFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVIT 207
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W II+A+ + + + L+ +M + + P T +LSAC+ L G+ H
Sbjct: 208 WNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK 267
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS---------------- 307
S + + N++I MY CG ++ A+ +F +M+ +DI+SW +
Sbjct: 268 NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARN 327
Query: 308 ---------------MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
MI GY + A++LF M VKPD T + V+++C H G
Sbjct: 328 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 387
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+E G+ + ++ +K +L + ++D+ + G +++A ++M
Sbjct: 388 LELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREM 433
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 8/246 (3%)
Query: 158 QCLAIRTGFIANVYVGSSLITL-----YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
C AI+ G AN + + ++T Y + A ++F+E+P N+ W +I ++
Sbjct: 59 HCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY---ARRLFDEIPEPNLFIWNTMIRGYS 115
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + + LY M ++P+ +TF + T AL GR H ++ G +
Sbjct: 116 RLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVF 175
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V +L+ MY CG ++ A VF+ D+++WN +I+ Y + G + LF M ++
Sbjct: 176 VHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQ 235
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
V P +T + V+S+C + GK + ++ L + ++D+ G ++ A
Sbjct: 236 VLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSAL 295
Query: 393 DFIKQM 398
+ M
Sbjct: 296 GIFRSM 301
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 123/262 (46%), Gaps = 21/262 (8%)
Query: 92 FTGTNSTFGSSNVFDQLLD------TPVVD-------VEKLISMHHDLHRERLKVDASFL 138
FT + N FD++ + T ++D ++ + + ++ +K D +
Sbjct: 316 FTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTM 375
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ +T+C + G + R +++V ++LI +Y KC + A +F EM
Sbjct: 376 VSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQ 435
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+ +WTA+I A + L+++ M + + P++ T+ +LSACT +G + +GR
Sbjct: 436 RDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKY 495
Query: 259 HCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHG 316
+ T + G I L+ + + G ++EA V NM K + + W +++AG +
Sbjct: 496 FLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVY- 554
Query: 317 LAVRAIDLFEEMMKQ--RVKPD 336
R D+ E ++KQ ++PD
Sbjct: 555 ---RESDMAEMVVKQILELEPD 573
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC--KCGNVEE 289
P S+L C ++ Q + HCQ I+ G + + N +++ C + G+ +
Sbjct: 35 FSPPTHPLISLLETCE---SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQY 91
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A +F+ + ++ WN+MI GY++ + L+ EM+++ VKPD TF +
Sbjct: 92 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+E G+ + KHGL+ + ++ +V + G L+ AR P
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP 201
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 229/420 (54%), Gaps = 19/420 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+K I + + ++ +K D ++ +++C + ++ G LAI+ I+ V V ++L
Sbjct: 380 DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKC+ I A +F +P +NV+SWT+IIA + L R M+ + L+PN
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNA 498
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T T+ L+AC GAL G+ H +R G + N+L+ MY +CG + A FN+
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS 558
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
KD+ SWN ++ GY++ G ++LF+ M+K RV+PD ITF+ ++ C +V +G
Sbjct: 559 -QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQG 617
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA------- 409
+YF M +G+ P L HY+CVVDLLGRAG L+EA FI++MP+ P+ +W A
Sbjct: 618 LMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 410 ----------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
A+ L+ + ++ L NLYA W + A+VR++MK+ GL + GCS
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEPF 519
W+E+ V+ F ++DK + + EI VL+ ++M +G +D+ R E F
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIF 797
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 151/308 (49%), Gaps = 9/308 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + H L +K D + +CG ++ G +R G+ ++ V ++L
Sbjct: 178 EAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNAL 237
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
IT+Y KC + A +F+ MP R+++SW A+I+ + + LEL+ MR ++P+
Sbjct: 238 ITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T TS++SAC G GR H I GF I V NSL MY G+ EA +F+
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M KDIVSW +MI+GY + L +AID + M + VKPD IT V+S+C G ++ G
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 357 KVYFDSMAKHGLKPELDHYSCV----VDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+ K +K L Y V +++ + +++A D +P N + W + +
Sbjct: 418 V----ELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIA 472
Query: 413 RLLLEPEC 420
L L C
Sbjct: 473 GLRLNNRC 480
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 144/284 (50%), Gaps = 1/284 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E+ + + + + R+ VD V C R G+ +A+ + V +G++
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEP 234
+ ++ + ++DA+ VF +M RN+ SW ++ +A++ D + LY RM+ ++P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ +TF +L C G L +G+ H +R G+ I V N+LI+MY KCG+V+ A +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M +DI+SWN+MI+GY ++G+ ++LF M V PD +T VIS+C G
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G+ + G ++ + + + AG EA +M
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 112/203 (55%), Gaps = 1/203 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L++ +++C + R G I TGF ++ V +SL +Y +A K+F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
M +++VSWT +I+ + + D ++ YRMM ++P++ T ++LSAC G L
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G H I+ SY+ VAN+LI+MY KC +++A+ +F+N+ K+++SW S+IAG
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 314 QHGLAVRAIDLFEEMMKQRVKPD 336
+ A+ +F MK ++P+
Sbjct: 476 LNNRCFEAL-IFLRQMKMTLQPN 497
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 96/187 (51%), Gaps = 5/187 (2%)
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
+++ ++L M+ + ++ F +++ C A +G + + +++ N
Sbjct: 74 KLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGN 133
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM-KQRVK 334
+ ++M+ + GN+ +A YVF M +++ SWN ++ GYA+ G A+ L+ M+ VK
Sbjct: 134 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 193
Query: 335 PDAITFLGVISSCRHGGL--VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
PD TF V+ +C GG+ + GK + ++G + ++D + ++ + + G ++ AR
Sbjct: 194 PDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 393 DFIKQMP 399
+MP
Sbjct: 252 LLFDRMP 258
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 229/403 (56%), Gaps = 18/403 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E I+ +++ R ++ D + + +C +++ G AI++G + +V S++
Sbjct: 436 EDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 495
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC I +A K+ + + + +VSW +II+ F+ Q + + M + ++P+
Sbjct: 496 VDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDH 555
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ ++L C + G+ H Q I+ ++++L+ MY KCGN+ +++ +F
Sbjct: 556 FTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEK 615
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
D VSWN+MI GYA HG + A+++FE M + V P+ TF+ V+ +C H GL+++G
Sbjct: 616 ARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDG 675
Query: 357 KVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
YF M +++ L P+L+H++C+VD+LGR+ +EA +FI+ MPI +AV+W+
Sbjct: 676 CQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICK 735
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AA + L L+P+ A+ ++ L+N+YAG W +R R+LM+ L+ PGC
Sbjct: 736 IRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGC 795
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
SWIE+ + ++ F DK + R E+ +L+ L+ +MK GY P
Sbjct: 796 SWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGYEP 838
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 154/280 (55%), Gaps = 11/280 (3%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ R + D LS ++C + G CLA+++GF +V V ++++ LY KC+
Sbjct: 344 MTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKA 403
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+++AY VF+EM R+ VSW AIIAA Q E D L M+R+ M EP+DFT+ S+L
Sbjct: 404 LVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGM-EPDDFTYGSVLK 462
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC G +L G H + I+ G V+++++ MYCKCG + EA + + + G+++VS
Sbjct: 463 ACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVS 522
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WNS+I+G++ + A F EM+ VKPD T+ V+ +C + +E GK +
Sbjct: 523 WNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQII 582
Query: 365 KHGLKPELDHYSCVVDLLGRAG-------LLEEAR--DFI 395
K + + S +VD+ + G + E+AR DF+
Sbjct: 583 KQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFV 622
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 157/350 (44%), Gaps = 29/350 (8%)
Query: 82 HLDSQKFNHDFTG---TNSTFGSSNVFDQLLDTPVVDVEKLIS-------------MHHD 125
H D+ +N T T ++++F + D VV LIS + +
Sbjct: 82 HRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSME 141
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ R + +D + L+ + SCG ++ G LA++TG +V GS+L+ +Y KCR
Sbjct: 142 MSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRS 201
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA + F M RN VSW A IA Q Q +EL+ M+ L + + S +
Sbjct: 202 LDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRS 261
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C L R H I+ F S V +++ +Y K GN+ +A F + ++ +
Sbjct: 262 CAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETC 321
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+M+ G + GL A+ LF+ M + V D I+ GV S+C E K YF +
Sbjct: 322 NAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSAC------AEVKGYFQGLQV 375
Query: 366 HGL--KPELDHYSCV----VDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
H L K D CV +DL G+ L EA ++M ++V W A
Sbjct: 376 HCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNA 424
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 127/267 (47%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ R L V ++A SC + + AI+ F ++ VG++++ +Y+K
Sbjct: 243 MQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGN 302
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
++DA + F +P NV + A++ + ++L++ M S + + + + + SA
Sbjct: 303 LVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSA 362
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C QG HC ++ GF + V N+++ +Y KC + EA VF M +D VSW
Sbjct: 363 CAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSW 422
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N++IA Q+ I EM++ ++PD T+ V+ +C +E G V K
Sbjct: 423 NAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIK 482
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEAR 392
GL + S VVD+ + G + EA+
Sbjct: 483 SGLGLDAFVSSTVVDMYCKCGAITEAQ 509
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 38/303 (12%)
Query: 135 ASFLSTAVTS-----CGSTRN--IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
A F++TA S C S + G + +GF+ +V + L+ +Y++C
Sbjct: 12 AGFVATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTA 71
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY---------------------RM 226
A+ VF+ MP R+ VSW ++ A+ D L+ M
Sbjct: 72 HAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGM 131
Query: 227 MRNSM----------LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
RNS+ + + T +L +C G L G H ++ G + ++ ++
Sbjct: 132 FRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSA 191
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
L+ MY KC ++++A+ F+ M ++ VSW + IAG Q+ R ++LF +M + +
Sbjct: 192 LVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVS 251
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+ SC + + K+ + + +VD+ +AG L +AR
Sbjct: 252 QPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFI 311
Query: 397 QMP 399
+P
Sbjct: 312 GLP 314
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 38/208 (18%)
Query: 238 TFTSILSACTGSG--ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC----------- 284
TF+ + C +G AL G++AH + + GF V+N L+ MY +C
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 285 --------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G+ + A +F M D+VSWN++I+GY QHG+ ++ L
Sbjct: 79 TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEG-KVYFDSMA-KHGLKPELDHYSCVVDLL 382
EM ++ V D T ++ SC GGL + V ++A K GL+ ++ S +VD+
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSC--GGLDDLALGVQIHALAVKTGLETDVRAGSALVDMY 196
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEAA 410
G+ L++A F M N+V W AA
Sbjct: 197 GKCRSLDDALRFFHGMG-ERNSVSWGAA 223
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 228/400 (57%), Gaps = 29/400 (7%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E +K + L++A++ C ++ G L I+ G+ +N+ V +SL+ LY K I++
Sbjct: 260 EDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVE 319
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQV-----------DMCLELYRMMRNSMLEPNDF 237
A++ F M ++V+W A+IA AQ ++ L+++ + S ++P+ F
Sbjct: 320 AHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLF 379
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T +S+LS C+ A+ QG H QTI+ GF S + V+ SLISMY KCG++E A F M
Sbjct: 380 TLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEM 439
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+ +++W SMI G++QHG++ +A+ +FE+M V+P+ +TF+GV+S+C H G+V +
Sbjct: 440 STRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQAL 499
Query: 358 VYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-------- 408
YF+ M K+ +KP +DHY C+VD+ R G LE+A +FIK+M P+ IW
Sbjct: 500 NYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRS 559
Query: 409 ---------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
A+E L L+P+ T+V L N+Y +D +RVRK+M+ + + S
Sbjct: 560 HGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWS 619
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
WI I + VY F+ DK++ S I L+ L+ + K LGY
Sbjct: 620 WISIKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLGY 659
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 135/273 (49%), Gaps = 1/273 (0%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
F + C R+ G ++TG N +V S L+ +Y+KC + DA +VFE M
Sbjct: 66 FYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENM 125
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P RNVV+WT ++ F Q Q + +++ M + P+ +T +++L AC+ +L G
Sbjct: 126 PRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGD 185
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H I+ V ++L S+Y KCG +E+A+ F+ + K+++SW S ++ +G
Sbjct: 186 QFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNG 245
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
V+ + LF EM+ + +KP+ T +S C +E G K G + L +
Sbjct: 246 APVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRN 305
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ L ++G + EA F +M + V W A
Sbjct: 306 SLLYLYLKSGFIVEAHRFFNRMDDV-SMVTWNA 337
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 135/272 (49%), Gaps = 11/272 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS + +C S ++++ G + I+ + VGS+L +LYSKC + DA K F +
Sbjct: 168 LSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIR 227
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+NV+SWT+ ++A L L+ M + ++PN+FT TS LS C +L G
Sbjct: 228 EKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQ 287
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
I+ G+ S ++V NSL+ +Y K G + EA FN M +V+WN+MIAG+AQ
Sbjct: 288 VCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMME 347
Query: 318 AVR-----------AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+ A+ +F ++ + +KPD T V+S C +E+G+ K
Sbjct: 348 LTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKT 407
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G ++ + ++ + + G +E A +M
Sbjct: 408 GFLSDVIVSTSLISMYNKCGSIERASKAFLEM 439
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L++ +K D LS+ ++ C I G I+TGF+++V V +SLI++Y+KC
Sbjct: 369 LNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGS 428
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I A K F EM R +++WT++I F+Q L ++ M + + PN TF +LSA
Sbjct: 429 IERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSA 488
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVA----------NSLISMYCKCGNVEEAVYVFN 295
C+ +G + Q + +F +Q ++ M+ + G +E+A+
Sbjct: 489 CSHAGMVSQA---------LNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIK 539
Query: 296 NM-HGKDIVSWNSMIAGYAQHG 316
M + W++ IAG HG
Sbjct: 540 KMNYEPSEFIWSNFIAGCRSHG 561
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
E + +L C + + H ++ G V + L+++Y KCGN+E+A
Sbjct: 61 EEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARR 120
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF NM +++V+W +++ G+ Q+ AI +F+EM+ P T V+ +C
Sbjct: 121 VFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQS 180
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
++ G + + K+ L + S + L + G LE+A ++ N + W +A S
Sbjct: 181 LKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIR-EKNVISWTSAVS 239
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 224/429 (52%), Gaps = 31/429 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMH-------------HDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD + D VV +I+ + L LK D+ L + +C +
Sbjct: 171 VFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGD 230
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
G +G NV+V +SL+ +Y KC + A +F MP +++VSW+ +I
Sbjct: 231 CTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQG 290
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+A L+L+ M++ L+P+ +T +LSAC GAL G A R F S
Sbjct: 291 YAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSN 350
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ +LI MY KCG+V +A +F M KD V WN+M+ G + +G A LF + K
Sbjct: 351 PVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEK 410
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
++PD TF+G++ C HGG V EG+ +F++M + L P ++HY C+VDLLGRAGLL
Sbjct: 411 HGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLN 470
Query: 390 EARDFIKQMPIYPNAVIWEA-------------AESRLL----LEPECAATHVQLANLYA 432
EA I MP+ PNAV+W A AE L LEP + +VQL+N+Y+
Sbjct: 471 EAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYS 530
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
G W++A ++R MK++ ++ CSWIEI +V+ F DKS+ +I LD L
Sbjct: 531 GNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGR 590
Query: 493 QMKTLGYVP 501
++K +G+VP
Sbjct: 591 ELKAVGHVP 599
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 143/268 (53%), Gaps = 1/268 (0%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C ++R G L ++ G+ +V+V +SL++LY KC DA KVF+++P +NV
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV 180
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWTAII + + ++ + L+P+ F+ +L+AC G G
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRY 240
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
G + VA SL+ MY KCGN+E A +F+ M KDIVSW++MI GYA +GL +A
Sbjct: 241 ISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQA 300
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+DLF +M + +KPD T +GV+S+C G ++ G M ++ + ++D+
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDM 360
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + +A + M + V+W A
Sbjct: 361 YSKCGSVTQAWEIFTAMK-KKDRVVWNA 387
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF ++ N+ W +I + D + LY MR PN+FT +L AC
Sbjct: 70 VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ G H ++ G+ + V SL+S+Y KC N ++A+ VF+++ K++VSW ++I G
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITG 189
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Y G AI F+++++ +KPD+ + + V+++C G G+ ++ G+
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + ++D+ + G LE A MP
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMP 277
>gi|330689867|gb|AEC33263.1| putative pentatricopeptide protein [Triticum aestivum]
Length = 644
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 222/436 (50%), Gaps = 60/436 (13%)
Query: 119 LISMHHDLHRERLKVDASFLSTAVTSCGSTRNIR--GGAPYQCLAIRTGFIAN-VYVGSS 175
++ + D+HR + +A ++ A+++C ++ G + G + ++V +S
Sbjct: 194 VLELFGDMHRSGCEGNAESVAVALSACPYAGDLALAKGRAIHGYGVAKGVVRGYLFVTNS 253
Query: 176 LITLYSKCRVIIDAYKVFEE-------------------------------------MPV 198
L+ +Y K + DA +VF E M
Sbjct: 254 LVCMYGKLGKMDDAREVFREAGERNTVTWNALITSYAAAGMCDEALNVLVRMEQRGGMVA 313
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
NV+SW+A+I FA + LEL+R M+ L PN T ++LSACT A+ GR
Sbjct: 314 PNVMSWSAVIGGFASSGDNERALELFRRMQQQWLSPNVVTLATVLSACTEQLAVRLGREV 373
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H IR + VAN LI+MY KCG V +A VF+ M +D+VSWNSM+AGY HGL
Sbjct: 374 HADAIRSMVDRHSLVANGLINMYAKCGRVADARTVFDGMKSRDLVSWNSMLAGYGMHGLC 433
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSC 377
A+ +F +M + +V PD +TF+ V+S+C H G V EG+ FD M +H + P ++HY+C
Sbjct: 434 DDALAVFTDMAEAKVDPDGVTFVAVLSACSHAGRVSEGRRLFDQMILEHKISPSMEHYTC 493
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECA---------------- 421
+VDLLGRAGLL+EA +FI+ MP+ + +W A + + + A
Sbjct: 494 MVDLLGRAGLLKEASEFIETMPMGADLCVWGALLNSCRIHGDAAMAEATIAKALQAGVVT 553
Query: 422 -ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED--KSNT 478
H + NLYA WD + RVR + ++ GL+ NPG SW+E+ N V+ F A S
Sbjct: 554 TGNHTLITNLYAACGMWDDSKRVRVMTREAGLRKNPGQSWVEVKNKVFAFMAGSVPPSMP 613
Query: 479 RLSEILPVLDFLVDQM 494
R ++ VLD L +M
Sbjct: 614 RAEDVFRVLDDLYREM 629
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 20/252 (7%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMP-----VRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
++LI+ YS C +A F M + + V+WT +++A A+ + + LEL+ M
Sbjct: 143 NTLISAYSVCCDPNNAMATFARMAAAGEALPDAVTWTTLLSAHARCGKHPVVLELFGDMH 202
Query: 229 NSMLEPNDFTFTSILSACTGSG--ALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKCG 285
S E N + LSAC +G AL +GR+ H + G Y+ V NSL+ MY K G
Sbjct: 203 RSGCEGNAESVAVALSACPYAGDLALAKGRAIHGYGVAKGVVRGYLFVTNSLVCMYGKLG 262
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR---VKPDAITFLG 342
+++A VF ++ V+WN++I YA G+ A+++ M+QR V P+ +++
Sbjct: 263 KMDDAREVFREAGERNTVTWNALITSYAAAGMCDEALNVLVR-MEQRGGMVAPNVMSWSA 321
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL--------LGRAGLLEEARDF 394
VI G E F M + L P + + V+ LGR + R
Sbjct: 322 VIGGFASSGDNERALELFRRMQQQWLSPNVVTLATVLSACTEQLAVRLGREVHADAIRSM 381
Query: 395 IKQMPIYPNAVI 406
+ + + N +I
Sbjct: 382 VDRHSLVANGLI 393
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 2/209 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D E+ + + + ++ L + L+T +++C +R G AIR+ + V +
Sbjct: 331 DNERALELFRRMQQQWLSPNVVTLATVLSACTEQLAVRLGREVHADAIRSMVDRHSLVAN 390
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
LI +Y+KC + DA VF+ M R++VSW +++A + D L ++ M + ++P
Sbjct: 391 GLINMYAKCGRVADARTVFDGMKSRDLVSWNSMLAGYGMHGLCDDALAVFTDMAEAKVDP 450
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYV 293
+ TF ++LSAC+ +G + +GR Q I S ++ ++ + + G ++EA
Sbjct: 451 DGVTFVAVLSACSHAGRVSEGRRLFDQMILEHKISPSMEHYTCMVDLLGRAGLLKEASEF 510
Query: 294 FNNM-HGKDIVSWNSMIAGYAQHGLAVRA 321
M G D+ W +++ HG A A
Sbjct: 511 IETMPMGADLCVWGALLNSCRIHGDAAMA 539
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 122/311 (39%), Gaps = 64/311 (20%)
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACTGSGALGQG 255
P V W ++ A + D+ L LYR MR S PN +T L A T A
Sbjct: 36 PTTCAVPWNRLLRAHICRSRPDLALALYRRMRALSPTLPNSYTLPLALRAATSPIA---- 91
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK--------------- 300
+ H + +G ++ VA L++ Y + G +EA +VF+ M K
Sbjct: 92 SAIHAHALHLGLHAHPDVAGQLLAAYARHGRADEAHHVFDAMPSKRATMSWNTLISAYSV 151
Query: 301 ----------------------DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
D V+W ++++ +A+ G ++LF +M + + +A
Sbjct: 152 CCDPNNAMATFARMAAAGEALPDAVTWTTLLSAHARCGKHPVVLELFGDMHRSGCEGNAE 211
Query: 339 TFLGVISSCRHGG---LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
+ +S+C + G L + ++ +AK ++ L + +V + G+ G +++AR+
Sbjct: 212 SVAVALSACPYAGDLALAKGRAIHGYGVAKGVVRGYLFVTNSLVCMYGKLGKMDDAREVF 271
Query: 396 KQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
++ N V W A L YA D+A V M+ +G
Sbjct: 272 REAG-ERNTVTWNA-----------------LITSYAAAGMCDEALNVLVRMEQRGGMVA 313
Query: 456 PGC-SWIEIMN 465
P SW ++
Sbjct: 314 PNVMSWSAVIG 324
>gi|218185575|gb|EEC68002.1| hypothetical protein OsI_35789 [Oryza sativa Indica Group]
Length = 295
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/263 (46%), Positives = 175/263 (66%), Gaps = 4/263 (1%)
Query: 125 DLHRE-RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+LHR+ D S L+ A++SC + G L ++ G + V++GSSLITLYS+C
Sbjct: 5 ELHRKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRC 64
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ +Y VF+ MP +N VSWTA+I+ FA +V+ CL L+ M S +PND TF ++
Sbjct: 65 SQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFVTLF 124
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
S CT L GRS H +RMGF SY+ V+N+L+SMY KCG ++EA ++F + KD+V
Sbjct: 125 SVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQFIFGCIACKDLV 184
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SWN++I G +Q+GLA +DL +EM +Q + PDA++FLGV+SSCRH LVEEG+ F +M
Sbjct: 185 SWNAIIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTM 244
Query: 364 AKHGLKPELDHYS---CVVDLLG 383
+HG+KP LDHYS C +++LG
Sbjct: 245 IEHGIKPGLDHYSYVKCPIEILG 267
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+EL+R S + + +S+C QG H +++G S + + +SLI++
Sbjct: 4 MELHRKGETS---TDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITL 60
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y +C +E + VF M K+ VSW +MI+G+A H + LF MM KP+ ITF
Sbjct: 61 YSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITF 120
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ + S C L+ G+ + G + + ++ + + G ++EA+ FI
Sbjct: 121 VTLFSVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQ-FIFGCIA 179
Query: 401 YPNAVIWEA 409
+ V W A
Sbjct: 180 CKDLVSWNA 188
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 218/396 (55%), Gaps = 25/396 (6%)
Query: 133 VDASFLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
V + F T V S + ++ G A++ G+ + V V +SLI +Y KC+ I DA +
Sbjct: 234 VPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALE 293
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+FE M +++ SW +I++ Q D L L M + ++P+ T T++L AC+ A
Sbjct: 294 IFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAA 353
Query: 252 LGQGRSAHCQTIRMGF------FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
L GR H I G + + N++I MY KCG++ +A VF M KD+ SW
Sbjct: 354 LMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASW 413
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-A 364
N MI GY HG A+++F M + ++KPD +TF+GV+S+C H G V +G+ + M +
Sbjct: 414 NIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKS 473
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------E 408
K+ + P ++HY+CV+D+LGRAG L+EA + MPI N V+W E
Sbjct: 474 KYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAE 533
Query: 409 AAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
A R+ LEPE ++V ++N+Y V +++ VR M+ + ++ PGCSWIE+ N V
Sbjct: 534 VAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGV 593
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ F + D+++ I L+ L +++ GYVP+V
Sbjct: 594 HVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPDV 629
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 146/288 (50%), Gaps = 9/288 (3%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + E + D A+ +C I+ L + G +V++GS+L
Sbjct: 121 EEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSAL 177
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ Y K ++ A FEE+P+R+VV W A++ +AQ Q +M LE +R M + + P+
Sbjct: 178 VNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSR 237
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT T +LS G L GR H ++MG+ S + V+NSLI MY KC +E+A+ +F
Sbjct: 238 FTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEM 297
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M KDI SWNS+++ + Q G + L + M+ ++PD +T V+ +C H + G
Sbjct: 298 MREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHG 357
Query: 357 KVYFDSMAKHGL---KPELDHY---SCVVDLLGRAGLLEEARDFIKQM 398
+ M GL ++D + V+D+ + G + +A ++M
Sbjct: 358 REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM 405
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 9/266 (3%)
Query: 138 LSTAVTSCGST---RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
L+T + S ++ +N+ G + GF+ + +SLI +YSKC + A +F
Sbjct: 37 LTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFS 96
Query: 195 EMPVR--NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
+ P NV ++ AII+ F + E Y+ MRN + P+ FTF + AC +
Sbjct: 97 D-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI 155
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+ H + G + + ++L++ Y K G +E A F + +D+V WN+M+ GY
Sbjct: 156 ---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGY 212
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
AQ G ++ F M + V P T GV+S G + G++ K G +
Sbjct: 213 AQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGV 272
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++D+ G+ +E+A + + M
Sbjct: 273 AVSNSLIDMYGKCKCIEDALEIFEMM 298
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN-MHGKD 301
L A L +G+ H + GF + SLI+MY KC + A+ +F++ H +
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+ ++N++I+G+ +G + +++M + V PD TF I +C V E K
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLD---VLEIKKIHG 160
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K GL+ ++ S +V+ + GL+E A+ +++PI + V+W A
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR-DVVLWNA 207
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 231/410 (56%), Gaps = 21/410 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAI-RTGFIANVYVGSS 175
E+ + + ++ R ++ D L + +++C + +I G L GF +++ + ++
Sbjct: 197 EEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNA 256
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
I LYSKC + A +FE + ++VVSW +I + L L++ M S PN
Sbjct: 257 FIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPN 316
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYV 293
D T S+L AC GA+ GR H + G + + SLI MY KCG++E A V
Sbjct: 317 DVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQV 376
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
FN+M K + SWN+MI G+A HG A A DLF M K ++PD IT +G++S+C H GL+
Sbjct: 377 FNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLL 436
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----- 407
+ G+ F S+ + + + P+L+HY C++DLLG AGL +EA + I MP+ P+ VIW
Sbjct: 437 DLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLK 496
Query: 408 --------EAAES---RLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
E AES +L+ +EPE + ++V L+N+YA W+ AR+R+++ KG+K
Sbjct: 497 ACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKV 556
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
PGCS IEI +VV+ F DK + + EI +L+ + ++ G+VP+ E
Sbjct: 557 PGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSE 606
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 131/240 (54%), Gaps = 6/240 (2%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LIT Y+ + A KVF+ + R+VVSW A+I + + + LEL++ M + +
Sbjct: 153 TALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVR 212
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQT-IRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
P++ T S+LSAC SG++ GR H GF S +++ N+ I +Y KCG+VE A
Sbjct: 213 PDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASG 272
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
+F + KD+VSWN++I GY L A+ LF+EM++ P+ +T L V+ +C H G
Sbjct: 273 LFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 332
Query: 353 VEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ G+ VY D K G+ + ++D+ + G +E A M ++ + W A
Sbjct: 333 IDIGRWIHVYIDKRLK-GVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNA 390
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 32/242 (13%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VFE N++ W ++ A + LE+Y M + PN +TF +L +C
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA--VY-------------- 292
S +GR H Q +++G SLISMY + G +E+A V+
Sbjct: 96 SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155
Query: 293 ---------------VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
VF+ + +D+VSWN+MI GY ++ A++LF+EMM+ V+PD
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE 215
Query: 338 ITFLGVISSCRHGGLVEEGK-VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
T + V+S+C G +E G+ ++ HG L + + L + G +E A +
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275
Query: 397 QM 398
+
Sbjct: 276 GL 277
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 217/370 (58%), Gaps = 22/370 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+R G + +V +SLI++YS ++ A +F MP RNV+SW+ +I + + Q L
Sbjct: 91 LRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEAL 150
Query: 222 ELYR---MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L+R M+ + + PN+FT + +L+AC GAL G+ AH + G + + +LI
Sbjct: 151 ALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALI 210
Query: 279 SMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
MY KCG+VE+A +VF+N+ KD+++W++MI+G A HGLA + LF +M+ Q V+P+A
Sbjct: 211 DMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNA 270
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+TFL V +C HGGLV EGK Y M + + + P + HY C+VDL GRAG ++EA + +K
Sbjct: 271 VTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVK 330
Query: 397 QMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQ 439
MP+ P+ ++W E A +L+ LEP + +V L+N+YA W+
Sbjct: 331 SMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWED 390
Query: 440 AARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
VR LM+ G+K PGCS IE+ V++ F D S+ +I +L+ +++++K GY
Sbjct: 391 VRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGY 450
Query: 500 VPEVHEEKVD 509
V E +D
Sbjct: 451 VGNTKEVLLD 460
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 8/221 (3%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+ ++ MR ++P+ TF +L + L GRS H Q +R G V SLISM
Sbjct: 49 ISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISM 108
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK---QRVKPDA 337
Y G V+ A +F M ++++SW+ MI GY + G A+ LF EM V+P+
Sbjct: 109 YSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 168
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
T GV+++C G +E GK + K G+ ++ + ++D+ + G +E+A
Sbjct: 169 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 228
Query: 398 MPIYPNAVIWEAAESRLL---LEPECAATHVQLANLYAGVR 435
+ + + W A S L L EC ++ N GVR
Sbjct: 229 LGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMIN--QGVR 267
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM- 196
+S + +CG + G + G +V +G++LI +Y+KC + A VF +
Sbjct: 171 MSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLG 230
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P ++V++W+A+I+ A + C+ L+ M N + PN TF ++ AC G + +G+
Sbjct: 231 PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGK 290
Query: 257 S-AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQ 314
T IQ ++ +Y + G ++EA V +M + D++ W ++++G
Sbjct: 291 DYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRM 350
Query: 315 HG 316
HG
Sbjct: 351 HG 352
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 232/425 (54%), Gaps = 55/425 (12%)
Query: 133 VDASFLSTAVT------SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI 186
V AS ++TAVT +CG +++ G + +G + + V ++L+ +Y++C +
Sbjct: 153 VRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDM 212
Query: 187 IDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC-------------------------- 220
A+ +FE M +R++ SWT++I+ + QVD
Sbjct: 213 DAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVG 272
Query: 221 -----LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
LE +R M+ + ++FT S+++AC GAL G A R+G + V N
Sbjct: 273 RFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGN 332
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
+LI MY KCG++E A+ VF +MH +D +W ++I G A +G AID+F M++ P
Sbjct: 333 ALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTP 392
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDF 394
D +TF+GV+++C H GLV++G+ +F SM + + + P + HY C++D+LGRAG L+EA D
Sbjct: 393 DEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDT 452
Query: 395 IKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCW 437
I +MP+ PN+ IW AAE L L+P+ + ++ L+N+YA W
Sbjct: 453 IDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRW 512
Query: 438 DQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
R+R+++ +KG+K PGCS IE+ +++ F A D+S+ EI L+ ++ ++
Sbjct: 513 KDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNA 572
Query: 498 GYVPE 502
GYVP+
Sbjct: 573 GYVPD 577
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN----VVSWTAIIAAFAQEWQV 217
++ G +N + SSLI +Y+ A V E + V W A+I+ + +
Sbjct: 83 VKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRF 142
Query: 218 DM-CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
++ C M+R S + T+ S+LSAC L G H + + G +V N+
Sbjct: 143 ELSCCSFVDMVRASAM-ATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENA 201
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ----- 331
L+ MY +CG+++ A +F M + + SW S+I+G + G RA DLF+ M ++
Sbjct: 202 LVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAW 261
Query: 332 --------------------------RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+V+ D T + V+++C G +E G+ M +
Sbjct: 262 TAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGR 321
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G+K ++ + ++D+ + G +E A D K M
Sbjct: 322 LGIKMDVFVGNALIDMYSKCGSIERALDVFKDM 354
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 18/197 (9%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
+++ D + + VT+C + G + R G +V+VG++LI +YSKC I A
Sbjct: 288 KVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERA 347
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
VF++M R+ +WTAII A + + ++++ M ++ P++ TF +L+ACT +
Sbjct: 348 LDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHA 407
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVAN---------SLISMYCKCGNVEEAVYVFNNMHGK 300
G + +GR F S + N LI + + G ++EA+ + M K
Sbjct: 408 GLVDKGREF--------FLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMK 459
Query: 301 -DIVSWNSMIAGYAQHG 316
+ W +++A +G
Sbjct: 460 PNSTIWGTLLASCRVYG 476
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSA-----HCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
P+ +TF S+L A + ++ H ++ G S A+SLI MY G+
Sbjct: 49 PDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGA 108
Query: 289 EAVYVFNNM----HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
A V G V WN++I+G+ + G + F +M++ A+T++ V+
Sbjct: 109 AARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVL 168
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
S+C G + G + + G+ P+ + +VD+ G ++ A + M +
Sbjct: 169 SACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQM 224
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 210/369 (56%), Gaps = 21/369 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ G + + +SL++ Y+ C A KVF+EMPVR+ ++W +I + + + L
Sbjct: 152 VAEGHSPDALLATSLVSSYAACGDGDSARKVFDEMPVRDTIAWNVLITCYTRNRRTKDAL 211
Query: 222 ELYRMMRN--SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+L+ MR + EP+D T +L ACT GAL G + G+ ++V NSLI+
Sbjct: 212 KLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYAVDHGYGGELKVRNSLIT 271
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY KCG V++A VF K +V+W++MI+G A +G AI FEEM + V PD T
Sbjct: 272 MYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAISAFEEMGRSGVAPDEQT 331
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDF-IKQ 397
F GV+S+C H GLV+EG +FD M ++ LKP + HY C+VDL+GRAGLL++A + +K
Sbjct: 332 FTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLMGRAGLLDQAYELVVKD 391
Query: 398 MPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQA 440
M + P+A IW E + L+ L+ + A +V L N YA V W +
Sbjct: 392 MRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAGDYVLLLNTYAAVEDWGKV 451
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
A VRKLMK+KG++T PGC+ +E+ ++ F A D S+ R +EI LD + ++ GYV
Sbjct: 452 AEVRKLMKEKGIQTTPGCTTVELNGEIHEFIAADASHPRKAEIYEKLDEINKHLRIAGYV 511
Query: 501 PEVHEEKVD 509
P V E D
Sbjct: 512 PNVSSELHD 520
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 6/182 (3%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N F+ + +L C AL R H + G +A SL+S Y CG+ + A VF
Sbjct: 127 NAFSLSIVLGHCR---ALAHARQLHANVVAEGHSPDALLATSLVSSYAACGDGDSARKVF 183
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM--KQRVKPDAITFLGVISSCRHGGL 352
+ M +D ++WN +I Y ++ A+ LF+ M + +PD +T + ++ +C G
Sbjct: 184 DEMPVRDTIAWNVLITCYTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGA 243
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
++ G+ ++ HG EL + ++ + + G +++A + P + V W A S
Sbjct: 244 LDFGEKVWEYAVDHGYGGELKVRNSLITMYTKCGCVDKAYQVFCETP-KKSVVTWSAMIS 302
Query: 413 RL 414
L
Sbjct: 303 GL 304
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 209/378 (55%), Gaps = 23/378 (6%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C G Q ++ G NVYV +++I Y C+ I DA ++F+EM R V
Sbjct: 126 LKACAXISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTV 185
Query: 202 VSWTAIIAA-FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
VSW A+++A EW D L+ MR S +P++ T +LSAC+ G L GR H
Sbjct: 186 VSWNAVLSACVDNEWLND-SFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHS 244
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
Q I G ++ +L+ MY KCG V EA VF+ M +++ +W++MI G AQHG A
Sbjct: 245 QVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKE 304
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVV 379
A++LF +M + + P+ +TFLGV+ +C H GLV++G +F M HG++P + HY +V
Sbjct: 305 ALELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMV 364
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIW-------------------EAAESRLL-LEPE 419
D+L RAG L+EA +FI MP+ + V+W + RLL LEP
Sbjct: 365 DILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELEPR 424
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+ V +AN+YA V WD+AA VR+ MKD GLK G S IE+ ++RF + D
Sbjct: 425 RSGNFVMVANMYAEVGKWDKAANVRRTMKDTGLKKMAGESCIEVGGSIHRFFSGDDPQLD 484
Query: 480 LSEILPVLDFLVDQMKTL 497
++L +LD L MKT+
Sbjct: 485 CEDVLQLLDGLNLHMKTV 502
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + + +++C N+ G I G + N +G++L+ +Y+KC + +A VF
Sbjct: 219 DETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVF 278
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
M RNV +W+A+I AQ LEL+ M+ S + PN TF +L AC+ +G +
Sbjct: 279 HRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFLGVLCACSHAGLVD 338
Query: 254 QG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV-YVFNNMHGKDIVSWNSMIAG 311
G R H G + +++ + + G ++EA ++ N D V W ++++
Sbjct: 339 DGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSA 398
Query: 312 YAQHGL 317
HG+
Sbjct: 399 CTIHGI 404
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 10/248 (4%)
Query: 165 GFIANV---YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
GFIA + SS + + RV++ + E V SW +I ++A +
Sbjct: 51 GFIAGPLLRFCASSPLGNLNHARVLLSGSEKSE------VSSWNDLIRSYATRDSPREAI 104
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
Y MR+ + P+ TF +L AC A +GR ++ G + V N++I Y
Sbjct: 105 GAYLEMRSLGISPDKLTFPILLKACAXISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFY 164
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
C + +A +F+ M + +VSWN++++ + + LF +M PD T +
Sbjct: 165 GSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMV 224
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
++S+C G + G+ + + G+ + +VD+ + G + EA +M +
Sbjct: 225 ILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRM-LE 283
Query: 402 PNAVIWEA 409
N W A
Sbjct: 284 RNVWTWSA 291
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 202/369 (54%), Gaps = 18/369 (4%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G C + GF +N+ V ++L+ +Y+KC + D+ KVFE M R++++W IIA+
Sbjct: 494 GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVH 553
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
++ L + MR + P+ T SIL C+ A QG+ H ++G S + V
Sbjct: 554 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 613
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
N LI MY KCG++ + VF M KD+V+W ++I+ +G +A+ F EM +
Sbjct: 614 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 673
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEAR 392
PD + F+ +I +C H GLVEEG YF M K + ++P ++HY+CVVDLL R+ LL++A
Sbjct: 674 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 733
Query: 393 DFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVR 435
DFI MP+ P++ IW A +E + L P+ +V ++N+YA +
Sbjct: 734 DFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALG 793
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
WDQ +RK +K +GLK +PGCSW+EI N VY F K + + E+ +L L M
Sbjct: 794 KWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMA 853
Query: 496 TLGYVPEVH 504
GY+ +
Sbjct: 854 KEGYIANLQ 862
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 170/329 (51%), Gaps = 19/329 (5%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S++ + R RL+ D + + +C + + GF +++Y+G++LI +
Sbjct: 159 LSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDM 218
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y + + A KVFEEMP+R+VVSW ++I+ + + LE+Y RN + P+ +T
Sbjct: 219 YCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTM 278
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S+L AC G G++ +G H ++G + V N L+SMYCK + + +F+ M
Sbjct: 279 SSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVL 338
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D VSWN+MI GY+Q GL +I LF EM+ Q KPD +T ++ +C H G +E GK
Sbjct: 339 RDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYV 397
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPE 419
D M G + + + ++++ + G L +++ M ++V W +
Sbjct: 398 HDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC-KDSVSWNS---------- 446
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMK 448
+ N+Y +D+A ++ K+MK
Sbjct: 447 -------MINVYIQNGSFDEAMKLFKMMK 468
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 141/280 (50%), Gaps = 2/280 (0%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
+ K D +++ + +CG ++ G I +G+ + + LI +Y+KC ++ +
Sbjct: 370 QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLAS 429
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
+VF M ++ VSW ++I + Q D ++L++MM+ ++P+ T+ +LS T
Sbjct: 430 QEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQL 488
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
G L G+ HC +MGF S I V+N+L+ MY KCG + +++ VF NM +DI++WN++I
Sbjct: 489 GDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTII 548
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
A + + M + V PD T L ++ C +GK + K GL+
Sbjct: 549 ASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLE 608
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + ++++ + G L + K M + V W A
Sbjct: 609 SDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT-KDVVTWTA 647
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 8/293 (2%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V K + + H+ R+ L S +S A+ S +T + L I G +V +
Sbjct: 59 VMKTLRVLHECSRQTL---FSSISRALASAATTTQLH---KLHSLIITLGLHHSVIFSAK 112
Query: 176 LITLYSKCRVIIDAYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
LI Y+ R ++ VF P NV W +II A L LY + L+P
Sbjct: 113 LIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQP 172
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ +TF S+++AC G +S H + + MGF S + + N+LI MYC+ ++++A VF
Sbjct: 173 DTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVF 232
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +D+VSWNS+I+GY +G A++++ V PD+ T V+ +C G VE
Sbjct: 233 EEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVE 292
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
EG + + K G+K ++ + ++ + + L + R +M + +AV W
Sbjct: 293 EGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM-VLRDAVSW 344
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E + D + + + + C R G + G ++V VG+ LI +YSKC
Sbjct: 567 MRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGS 626
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ ++++VF+ M ++VV+WTA+I+A + + + M + + P+ F +I+ A
Sbjct: 627 LRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFA 686
Query: 246 CTGSGALGQG 255
C+ SG + +G
Sbjct: 687 CSHSGLVEEG 696
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 248/486 (51%), Gaps = 47/486 (9%)
Query: 67 VHLRLIQDFLQTD-----------SKHLDSQKFNHDFTGTNS---TFGSSNVFDQLLDTP 112
VH LI ++Q + S H D + TG S + N+FD++
Sbjct: 100 VHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKD 159
Query: 113 VVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQC 159
VV +IS + ++ + ++ D S + T +++ + +I G
Sbjct: 160 VVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHS 219
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
GF +N+ + ++LI YSKC + A +F + ++V+SW +I +
Sbjct: 220 WIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKE 279
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSL 277
L L++ M S PND T SIL AC GA+ GR H + G + + SL
Sbjct: 280 ALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 339
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
I MY KCG++E A VFN+M K + +WN+MI G+A HG A A D+F M K +KPD
Sbjct: 340 IDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDD 399
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
ITF+G++S+C H G+++ G+ F SM + + P+L+HY C++DLLG +GL +EA + I
Sbjct: 400 ITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMIS 459
Query: 397 QMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQ 439
M + P+ VIW + A++ +EP ++V L+N+YA W++
Sbjct: 460 TMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNE 519
Query: 440 AARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
AR+R L+ DKG+K PGCS IEI +VV+ F DK + R EI +L+ + ++ G+
Sbjct: 520 VARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGF 579
Query: 500 VPEVHE 505
VP+ E
Sbjct: 580 VPDTSE 585
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 146/302 (48%), Gaps = 36/302 (11%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC + + G ++ G+ ++YV +SLI++Y + + DA+KVF+ R+V
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129
Query: 202 VSWTAIIAAFAQEWQVDM-------------------------------CLELYRMMRNS 230
VS+TA++ +A ++ LEL++ M +
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ P++ T +++SA SG++ GR H GF S +++ N+LI Y KCG +E A
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F + KD++SWN +I GY L A+ LF+EM++ P+ +T L ++ +C H
Sbjct: 250 CGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHL 309
Query: 351 GLVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G ++ G+ VY D K G+ + ++D+ + G +E A M ++ + W
Sbjct: 310 GAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAW 367
Query: 408 EA 409
A
Sbjct: 368 NA 369
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 32/250 (12%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VFE + N++ W + A L+LY M + L PN +TF +L +C
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A +G H +++G+ + V SLISMY + +E+A VF+ +D+VS+ ++
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 309 IAGYAQHG-----------LAVR--------------------AIDLFEEMMKQRVKPDA 337
+ GYA G + V+ A++LF+EMMK V+PD
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
T + VIS+ G +E G+ +A HG L + ++D + G +E A
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255
Query: 398 MPIYPNAVIW 407
+ Y + + W
Sbjct: 256 LS-YKDVISW 264
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 227/391 (58%), Gaps = 22/391 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D +++ + +CGS +R G A++ G +N V ++ LY KC + DA +VF
Sbjct: 129 DNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVF 188
Query: 194 EEMP----VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
EEMP ++ V WTA+I F + +++ LE +R M+ + PN+FT +LSAC+
Sbjct: 189 EEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQL 248
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
GAL GR H + + V N+LI+MY +CG+++EA VF+ M +D++++N+MI
Sbjct: 249 GALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMI 308
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGL 368
+G + +G + +AI+LF M+ +R++P +TF+GV+++C HGGLV+ G F SM + +G+
Sbjct: 309 SGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGV 368
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES------RLLLEPECA- 421
+P+++HY C+VDLLGR G LEEA D I+ M + P+ ++ S L L + A
Sbjct: 369 EPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAK 428
Query: 422 ----------ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
T+V L+++YA W +AA+VR MK+ G++ PGCS IE+ N ++ F
Sbjct: 429 VLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFL 488
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
D + R I L+ L ++ GY PE
Sbjct: 489 LGDLRHPRKERIYEKLEELNRLLRLEGYHPE 519
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 6/256 (2%)
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+++I P IR G + ++ L+ SKC I A ++F+ NV +TA+
Sbjct: 42 SKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTAL 101
Query: 208 IAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
I F ++LY RM+ +S+L P+++ SIL AC AL +GR H + +++G
Sbjct: 102 IDGFVSSGNYFDAIQLYSRMLHDSIL-PDNYLMASILKACGSQLALREGREVHSRALKLG 160
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMH----GKDIVSWNSMIAGYAQHGLAVRAI 322
S V ++ +Y KCG + +A VF M KD V W +MI G+ ++ RA+
Sbjct: 161 LSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRAL 220
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
+ F M + V+P+ T + V+S+C G +E G+ M K ++ L + ++++
Sbjct: 221 EAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMY 280
Query: 383 GRAGLLEEARDFIKQM 398
R G ++EA+ +M
Sbjct: 281 SRCGSIDEAQTVFDEM 296
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 3/171 (1%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
I+S S + Q H Q IR G + L+ KC ++ A +F H +
Sbjct: 35 IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 94
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+ + ++I G+ G AI L+ M+ + PD ++ +C + EG+
Sbjct: 95 VYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHS 154
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP---IYPNAVIWEA 409
K GL +++L G+ G L +AR ++MP + + V W A
Sbjct: 155 RALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTA 205
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 225/448 (50%), Gaps = 32/448 (7%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VF ++ D VV +I+ + ++ E + D ++ + C R
Sbjct: 202 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 261
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G +++V ++L+ +Y+KC + +A VF EM V++++SW II
Sbjct: 262 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 321
Query: 211 FAQEWQVDMCLELYRMM-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+++ + L L+ ++ P++ T +L AC A +GR H +R G+FS
Sbjct: 322 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 381
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
VANSL+ MY KCG + A +F+++ KD+VSW MIAGY HG AI LF +M
Sbjct: 382 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 441
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLL 388
+ ++ D I+F+ ++ +C H GLV+EG +F+ M ++P ++HY+C+VD+L R G L
Sbjct: 442 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 501
Query: 389 EEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLY 431
+A FI+ MPI P+A IW A AE LEPE +V +AN+Y
Sbjct: 502 IKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 561
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
A W+Q R+RK + +GL+ NPGCSWIEI V F A D SN I L +
Sbjct: 562 AEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVR 621
Query: 492 DQMKTLGYVPEVHEEKVDDASHKRTEPF 519
+M GY P +D ++ E
Sbjct: 622 ARMIEEGYSPLTKYALIDAEEMEKEEAL 649
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 149/286 (52%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D I + + +++D+ S S S R++ GG +++GF VG+
Sbjct: 24 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN 83
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL+ Y K + + A KVF+EM R+V+SW +II + + L ++ M S +E
Sbjct: 84 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 143
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ T S+ + C S + GR+ H ++ F + N+L+ MY KCG+++ A VF
Sbjct: 144 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 203
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M + +VS+ SMIAGYA+ GLA A+ LFEEM ++ + PD T V++ C L++
Sbjct: 204 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 263
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
EGK + + ++ L ++ + ++D+ + G ++EA +M +
Sbjct: 264 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 309
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 102/206 (49%)
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+E+ + + W ++ A+ + L++ M +S +E + +TF+ + + + ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
G H ++ GF V NSL++ Y K V+ A VF+ M +D++SWNS+I GY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
+GLA + + +F +M+ ++ D T + V + C L+ G+ K E
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++D+ + G L+ A+ ++M
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREM 206
>gi|302805077|ref|XP_002984290.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
gi|300148139|gb|EFJ14800.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
Length = 448
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/357 (35%), Positives = 201/357 (56%), Gaps = 17/357 (4%)
Query: 163 RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
+ G A VG+SL+ +Y +C + +A VFE +P ++ ++W AI+ A+AQ+ LE
Sbjct: 4 KVGLEAETVVGTSLVNMYGRCHSLGNARLVFERIPCKDAITWNAIVTAYAQDGYGKEALE 63
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
+++ M+ ++ TF S+L AC + AL GR H + G + VA +L++MY
Sbjct: 64 IFQRMQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELIVATALVNMYA 123
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG + EA VF+ M G D+V+W +++AG AQHG + DL M + +KP+ +TFL
Sbjct: 124 KCGKLVEAREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEGIKPNNVTFLS 183
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
++ +C H G ++E + F +MA HG P +H+ CV+DLLGR G LEEA++ I MP P
Sbjct: 184 LVFACSHSGYLDEARDCFIAMADHGFFPLPEHFRCVIDLLGRGGRLEEAQEVIDTMPFEP 243
Query: 403 NAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRK 445
W AAE +EP + ++ ++NLYA + WD +VR+
Sbjct: 244 GLTAWLTMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMSNLYAALERWDDVKKVRR 303
Query: 446 LMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
LM+ +G+K PG S IE+ N ++ F A +KS+ + I L L ++K GYVP+
Sbjct: 304 LMERRGVKKEPGLSCIEVKNRLHEFGAANKSHPQKDLIYEELRKLTLEIKEAGYVPD 360
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + +E +K ++ + + +C ST + G + G + V ++L+ +
Sbjct: 62 LEIFQRMQQEGVKTGSATFISVLEACASTSALALGRVIHQNLVANGLDRELIVATALVNM 121
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC +++A +VF++M +VV+WTAI+A AQ ++ +L R M ++PN+ TF
Sbjct: 122 YAKCGKLVEAREVFDQMEGMDVVAWTAIVAGSAQHGHIEESKDLMRRMELEGIKPNNVTF 181
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-H 298
S++ AC+ SG L + R GFF + +I + + G +EEA V + M
Sbjct: 182 LSLVFACSHSGYLDEARDCFIAMADHGFFPLPEHFRCVIDLLGRGGRLEEAQEVIDTMPF 241
Query: 299 GKDIVSWNSMIAG 311
+ +W +M++
Sbjct: 242 EPGLTAWLTMLSA 254
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 143/381 (37%), Positives = 217/381 (56%), Gaps = 18/381 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + SC +R G + GF ++VYV ++L++ Y KC V+ +A KVF++M
Sbjct: 114 FTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMR 173
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+VV+W ++I+ + Q + L+ M+ +EPN TF S+LSAC GA G
Sbjct: 174 DRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCW 233
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H + G + + SLI+MY +CGNV +A VF++M +++V+W +MI+GY +G
Sbjct: 234 VHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGY 293
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYS 376
+A++LF EM + + P++ITF+ V+S+C H GLV EG+ F+SM ++ L PE++H+
Sbjct: 294 GSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHV 353
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+VD+LGRAGLL+EA +FIK++ P IW A AE RL EP
Sbjct: 354 CLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPG 413
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
A +V L+N+YA DQ VR M K LK G S I++ Y F DKS+T
Sbjct: 414 NPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTE 473
Query: 480 LSEILPVLDFLVDQMKTLGYV 500
+EI LD L+ + + GYV
Sbjct: 474 TNEIYHYLDQLMRKCREAGYV 494
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 130/249 (52%), Gaps = 2/249 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM-C 220
I +G+ + ++ + L+ L I ++F +P + +T++I + ++ +
Sbjct: 36 IVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYS 95
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L Y M S + P+++TFTS++ +C AL GR H + GF S + V +L+S
Sbjct: 96 LYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSF 155
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KCG + A VF+ M + +V+WNSMI+GY Q+G A AI LF+ M + V+P++ TF
Sbjct: 156 YGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATF 215
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ V+S+C H G G + +GL + + ++++ R G + +AR+ M
Sbjct: 216 VSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMK- 274
Query: 401 YPNAVIWEA 409
N V W A
Sbjct: 275 ERNVVAWTA 283
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 219/390 (56%), Gaps = 20/390 (5%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV--YVGSSLITLYSKCRVIIDAY 190
+ ++ L +++ + G C + GF + +V +SL+T Y+ C+ + DA
Sbjct: 250 ISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDAC 309
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
KVF E +NVV WTA++ + LE++ M + PN+ +FTS L++C G
Sbjct: 310 KVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLE 369
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L +GR H I+MG + + NSL+ MY KCG + +A+ VF + K++VSWNS+I
Sbjct: 370 DLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIV 429
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLK 369
G AQHG A+ LF+EM+++ V+ D IT G++S+C G++++ + +F A K +K
Sbjct: 430 GCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMK 489
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESR 413
++HY+C+VD+LGR G +EEA MP+ N+++W E A R
Sbjct: 490 LTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKR 549
Query: 414 LL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
+ +EP+C+A +V L+NLYA R W + AR+R MK G+ PG SWI + + + F +
Sbjct: 550 IFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLS 609
Query: 473 EDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
D+S+ EI L +L +++ LGY+P+
Sbjct: 610 ADRSHPLTEEIYEKLVWLGVKLRELGYIPD 639
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 23/195 (11%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R + + S ++A+ SC ++ G I+ G VY G+SL+ +YSKC
Sbjct: 345 EMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCG 404
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
I DA VF+ + +NVVSW ++I AQ L L++ M +E ++ T T +LS
Sbjct: 405 FIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLS 464
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANS----------LISMYCKCGNVEEAVYVF 294
AC+ SG L + R FF Y S ++ + +CG VEEA +
Sbjct: 465 ACSRSGMLQKARC---------FFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALA 515
Query: 295 NNMHGKDIVSWNSMI 309
+M V NSM+
Sbjct: 516 TSMP----VEANSMV 526
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 37/147 (25%)
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
C + A K+F+EMP RN +SWT II F +V+ + M ++ + T+
Sbjct: 134 CNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAM--PYVDKDVATW--- 188
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
N++++ YC G V +A+ +F M +D+
Sbjct: 189 --------------------------------NAMVNGYCNNGRVNDALRLFCQMPSRDV 216
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+SW S+I G ++G + +A+ F+ M+
Sbjct: 217 ISWTSIIVGLDRNGKSYQALFFFKNMV 243
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 38/191 (19%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR---------NSMLEP---- 234
A VF ++P +V +T ++ A+A + + L+ + NS+++
Sbjct: 75 SARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIIC 134
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
NDF ++A + Q S TI GF S G V EA F
Sbjct: 135 NDF-----VTAVKLFDEMPQRNSISWTTIIHGFLST--------------GRVNEAERFF 175
Query: 295 NNMH--GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
N M KD+ +WN+M+ GY +G A+ LF +M + D I++ +I G
Sbjct: 176 NAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSR----DVISWTSIIVGLDRNGK 231
Query: 353 VEEGKVYFDSM 363
+ +F +M
Sbjct: 232 SYQALFFFKNM 242
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 208/359 (57%), Gaps = 19/359 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+T + VG++L+ YSK DA +F+ + ++VV+W+A+++ AQ +
Sbjct: 427 IKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGAT 486
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACT-GSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L+ M ++PN+FT +S++ AC S + QGR H +I+ + I V+++L+SM
Sbjct: 487 YLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSM 546
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y + GN++ A VF +D+VSWNSMI+GYAQHG +++AI+ F +M ++ D +TF
Sbjct: 547 YSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTF 606
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
L VI C H GLV EG+ YFDSM + H + P ++HY+C+VDL RAG L+E I+ MP
Sbjct: 607 LAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMP 666
Query: 400 IYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
A++W +A+ L LEP ++T+V L+N+YA W +
Sbjct: 667 FPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDE 726
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
VRKLM + +K GCSWI+I N V+ F A DKS+ +I L ++ ++K GY P
Sbjct: 727 VRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSP 785
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 142/283 (50%), Gaps = 1/283 (0%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGF-IANVYVGSSLITLYSKCRVI 186
R + VD++ LS + +C S + G CL ++ G V G+SL+ +Y KC +
Sbjct: 92 RGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSV 151
Query: 187 IDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC 246
+ +VFE MP +NVV+WT+++ A + L+ MR + PN FTF S+LSA
Sbjct: 152 CEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAV 211
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
GAL G+ H Q+++ G S + V NSL++MY KCG VE+A VFN M +D+VSWN
Sbjct: 212 ASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWN 271
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+++AG + + A+ LF E K T+ VI C + + + + KH
Sbjct: 272 TLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKH 331
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G + + + D + G L +A + N V W A
Sbjct: 332 GFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTA 374
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + H+ K+ S +T + C + + + ++ GF V ++L
Sbjct: 287 LQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADA 346
Query: 180 YSKCRVIIDAYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
YSKC + DA +F RNVVSWTAII+ Q + + + L+ MR + PN+FT
Sbjct: 347 YSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFT 406
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
++++L A H Q I+ + V +L++ Y K G+ E+A+ +F +
Sbjct: 407 YSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIE 462
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR-HGGLVEEGK 357
KD+V+W++M++ +AQ G A LF +M Q +KP+ T VI +C V++G+
Sbjct: 463 QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGR 522
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ K+ + S +V + R G ++ A+
Sbjct: 523 QFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 4/237 (1%)
Query: 193 FEEMPVRNV-VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+E+P R+ V ++ +A+ V L+ + + R + + T + +L AC
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 252 LGQGRSAHCQTIRMGF-FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G HC ++ G + SL+ MY KCG+V E + VF M K++V+W S++
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G A + + LF M + + P+ TF V+S+ G ++ G+ K G +
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQL 427
+ + ++++ + GL+E+A+ M + V W + L L EC +QL
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMAGLQLN-ECELEALQL 289
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 213/354 (60%), Gaps = 19/354 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MM 227
N + +++++ Y + A + FE MPVR++VSW A++A + + + + L +++ M+
Sbjct: 177 NAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMV 236
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
R++ + PN+ T +S+L C+ ALG GR H ++ + SL+SMYCKCG++
Sbjct: 237 RDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDL 296
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ A +F+ M +D+++WN+MI+GYA HG AI+LFE+M Q V+P+ ITF+ V+++C
Sbjct: 297 DGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTAC 356
Query: 348 RHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP------- 399
H G+ + G F+ M + +G++ +DHYSC+VDLL RAG LE A I+ MP
Sbjct: 357 IHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLIRSMPFQPHPSA 416
Query: 400 ---------IYPNAVIWEAAESRLLLE-PECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
+Y N E A +L+ + P+ A +VQLAN+YA W +RVR+ MKD
Sbjct: 417 YGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMKD 476
Query: 450 KGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ PG SW+EI V++ FR+ D+ + +LS I L L ++MK +GYVP++
Sbjct: 477 NAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEERMKAMGYVPDL 530
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ + S LS+ + C + + G + V G+SL+++Y KC + A
Sbjct: 241 VRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGAC 300
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F EM +R+V++W A+I+ +A +EL+ M++ +EPN TF ++L+AC +G
Sbjct: 301 KLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTG 360
Query: 251 ALGQGRSAHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
G + + G + + + ++ + C+ G++E AV + +M
Sbjct: 361 MCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLIRSM 408
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR---SAHCQTIRMGFFSYIQVA 274
D L R + + + P+ ++ ++LS +G + R +A T R +
Sbjct: 64 DRLLADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRGARDLFAAMPATAR-----NVTSW 118
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N+++S + G V EA VF M ++ +SWN+M++ +A G A + FE+ K
Sbjct: 119 NTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEECFEDAPD---K 175
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+A+ + ++S G VE+ +F++M
Sbjct: 176 ENAVLWTAMVSGYMDSGHVEKAMQFFEAM 204
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 212/363 (58%), Gaps = 20/363 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++IT Y+K +I +A +F+ + R+ + W +I +AQ + L L+R M N+ +
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN+ T ++LSAC +GAL GR H G ++V SLI MY KCG++E+A V
Sbjct: 70 PNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F + KD+V+WNSM+ GYA HG + A+ LF+EM +P ITF+GV+++C H GLV
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLV 189
Query: 354 EEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----- 407
EG +F SM ++G++P+++HY C+V+LLGRAG LEEA + +K M I + V+W
Sbjct: 190 SEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLG 249
Query: 408 ------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ AE + + T+V L+N+YA W+ ARVR LMK+ G +
Sbjct: 250 ACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKE 309
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE--VHEEKVDDASH 513
PGCS IE+ N V+ F A D + + EI +L+ + +KT GY P+ + ++DA
Sbjct: 310 PGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQK 369
Query: 514 KRT 516
+R+
Sbjct: 370 ERS 372
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+++CG T + G G NV VG+SLI +YSKC + DA VFE + ++V
Sbjct: 79 LSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDV 138
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG-RSAHC 260
V+W +++ +A L L++ M +P D TF +L+AC+ +G + +G + +
Sbjct: 139 VAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYS 198
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQHGLAV 319
G ++ ++++ + G +EEA + NM +D V W +++ HG
Sbjct: 199 MKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGNIA 258
Query: 320 RAIDLFEEMMKQRV 333
+ E ++ Q +
Sbjct: 259 LGEQIAEYLVSQNL 272
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 31/127 (24%)
Query: 297 MHGKDIVSWNSMIAGY-------------------------------AQHGLAVRAIDLF 325
M K +VS +MI Y AQHGL + LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
+M+ +V+P+ +T L V+S+C G +E G+ + +G+ + + ++D+ +
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKC 120
Query: 386 GLLEEAR 392
G LE+AR
Sbjct: 121 GSLEDAR 127
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 215/387 (55%), Gaps = 17/387 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+K D L + + + ++++ G ++ G + SL T+Y+KC + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F++M N++ W A+I+ +A+ ++++ M N + P+ + TS +SAC G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+L Q RS + R + + ++++LI M+ KCG+VE A VF+ +D+V W++MI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY HG A AI L+ M + V P+ +TFLG++ +C H G+V EG +F+ MA H + P
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINP 457
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
+ HY+CV+DLLGRAG L++A + IK MP+ P +W AA+
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQL 517
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
++P +VQL+NLYA R WD+ A VR MK+KGL + GCSW+E+ + FR
Sbjct: 518 FSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVG 577
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYV 500
DKS+ R EI ++++ ++K G+V
Sbjct: 578 DKSHPRYEEIERQVEWIESRLKEGGFV 604
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 190/371 (51%), Gaps = 18/371 (4%)
Query: 54 IISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPV 113
+I T + ++H RL+ LQ S L ++ + + + TF + VFD L +
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQF-SGFLITKLIHASSSFGDITF-ARQVFDDLPRPQI 84
Query: 114 VDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCL 160
+I M+ ++ R+ D+ + +C +++ G
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVD 218
R GF A+V+V + LI LY+KCR + A VFE +P+ R +VSWTAI++A+AQ +
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
LE++ MR ++P+ S+L+A T L QGRS H ++MG + SL
Sbjct: 205 EALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
+MY KCG V A +F+ M +++ WN+MI+GYA++G A AID+F EM+ + V+PD I
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ IS+C G +E+ + ++ + + + ++ S ++D+ + G +E AR +
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR-LVFDR 383
Query: 399 PIYPNAVIWEA 409
+ + V+W A
Sbjct: 384 TLDRDVVVWSA 394
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 5/218 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I M H++ + ++ D +++A+++C ++ R+ + +V++ S+LI +
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDM 367
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
++KC + A VF+ R+VV W+A+I + + + LYR M + PND TF
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+L AC SG + +G Q +I + + G++++A V M
Sbjct: 428 LGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 300 KDIVS-WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
+ V+ W ++++ +H R ++L E +Q D
Sbjct: 488 QPGVTVWGALLSACKKH----RHVELGEYAAQQLFSID 521
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 219/405 (54%), Gaps = 18/405 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D +K + + +D+H+ L + +C I G +++ G+ +YV S
Sbjct: 300 DSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLS 359
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC I+DA K FE + +VV WT+II + Q + L LY M+ + P
Sbjct: 360 ALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIP 419
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
ND T S+L AC+ AL QG+ H I+ F I + ++L +MY KCG++++ +F
Sbjct: 420 NDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIF 479
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +D++SWN+MI+G +Q+G ++LFE+M + KPD +TF+ ++S+C H GLV+
Sbjct: 480 WRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVD 539
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
G VYF M + + P ++HY+C+VD+L RAG L EA++FI+ + +W
Sbjct: 540 RGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAA 599
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A E + L ++ +V L+++Y + W+ RVR +MK +G+ P
Sbjct: 600 SKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEP 659
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
GCSWIE+ ++ + F D + ++ EI L L MK GY P
Sbjct: 660 GCSWIELKSLTHVFVVGDNMHPQIDEIRLGLKLLTKLMKDEGYQP 704
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 154/279 (55%), Gaps = 9/279 (3%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+A L+ T+ + + R G LA++T +V+ SSL+ +Y K ++ +A +F
Sbjct: 115 NAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLF 174
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM--LEPNDFTFTSILSACTGSGA 251
+EMP RN VSW +I+ +A + D EL+++MR+ N+F FTS+LSA T
Sbjct: 175 DEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYML 234
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ GR H ++ G + VAN+L++MY KCG++E+A+ F K+ ++W++M+ G
Sbjct: 235 VNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTG 294
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+AQ G + +A+ LF +M + P T +GVI++C + EG+ K G + +
Sbjct: 295 FAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQ 354
Query: 372 LDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYPNAVIW 407
L S +VD+ + G + +AR + I+Q P+ V+W
Sbjct: 355 LYVLSALVDMYAKCGSIVDARKGFECIQQ----PDVVLW 389
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Query: 127 HRERLKVDASFLSTAVTSCGSTRN-IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
H E+ K + F+ T+V S + + G LA++ G + V V ++L+T+Y KC
Sbjct: 210 HEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGS 269
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA K FE +N ++W+A++ FAQ D L+L+ M S P++FT +++A
Sbjct: 270 LEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINA 329
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C+ + A+ +GR H ++++G+ + V ++L+ MY KCG++ +A F + D+V W
Sbjct: 330 CSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLW 389
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
S+I GY Q+G A++L+ +M V P+ +T V+ +C + +++GK + K
Sbjct: 390 TSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIK 449
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ E+ S + + + G L++ +MP + + W A S L
Sbjct: 450 YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPA-RDVISWNAMISGL 497
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 8/276 (2%)
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
A+ C + +R G + TG ++ + +SLI LY+KC A VF+ + ++
Sbjct: 16 ALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKD 75
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-----PNDFTFTSILSACTGSGALGQG 255
VVSW +I AF+Q+ L + + R ++ PN T T + +A + G
Sbjct: 76 VVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAG 135
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R AH ++ + A+SL++MYCK G V EA +F+ M ++ VSW +MI+GYA
Sbjct: 136 RQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQ 195
Query: 316 GLAVRAIDLFEEMMKQR--VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
LA A +LF+ M + + F V+S+ LV G+ K+GL +
Sbjct: 196 ELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVS 255
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +V + + G LE+A ++ N++ W A
Sbjct: 256 VANALVTMYVKCGSLEDALKTF-ELSGNKNSITWSA 290
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 224/429 (52%), Gaps = 31/429 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMH-------------HDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD + D VV +I+ + L LK D+ L + +C +
Sbjct: 171 VFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGD 230
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
G +G NV+V +SL+ +Y KC + A +F MP +++VSW+ +I
Sbjct: 231 CTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQG 290
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+A L+L+ M++ L+P+ +T +LSAC GAL G A R F S
Sbjct: 291 YAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSN 350
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ +LI MY KCG+V +A +F M KD V WN+M+ G + +G A LF + K
Sbjct: 351 PVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEK 410
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLE 389
++PD TF+G++ C HGG V EG+ +F++M + L P ++HY C+VDLLGRAGLL
Sbjct: 411 HGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLN 470
Query: 390 EARDFIKQMPIYPNAVIWEA-------------AESRLL----LEPECAATHVQLANLYA 432
EA I MP+ PNAV+W A AE L LEP + +VQL+N+Y+
Sbjct: 471 EAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYS 530
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
G W++A ++R MK++ ++ CSWIEI +V+ F DKS+ +I LD L
Sbjct: 531 GNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGR 590
Query: 493 QMKTLGYVP 501
++K +G+VP
Sbjct: 591 ELKAVGHVP 599
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 143/268 (53%), Gaps = 1/268 (0%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C ++R G L ++ G+ +V+V +SL++LY KC DA KVF+++P +NV
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV 180
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VSWTAII + + ++ + L+P+ F+ +L+AC G G
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRY 240
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
G + VA SL+ MY KCGN+E A +F+ M KDIVSW++MI GYA +GL +A
Sbjct: 241 ISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQA 300
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+DLF +M + +KPD T +GV+S+C G ++ G M ++ + ++D+
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDM 360
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G + +A + M + V+W A
Sbjct: 361 YSKCGSVTQAWEIFTAMK-RKDRVVWNA 387
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF ++ N+ W +I + D + LY MR PN+FT +L AC
Sbjct: 70 VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ G H ++ G+ + V SL+S+Y KC N ++A+ VF+++ K++VSW ++I G
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITG 189
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Y G AI F+++++ +KPD+ + + V+++C G G+ ++ G+
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + ++D+ + G LE A MP
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMP 277
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 246/470 (52%), Gaps = 30/470 (6%)
Query: 65 TEVHLRLIQDFLQTDSKHLDSQKFNH----DFTGTNSTFGSSNVFDQLLDTPVVDVEKLI 120
E+H LI+ ++ HL + H T T S + + +P V ++
Sbjct: 37 VELHDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPS--LLKSMALSPAVPGAAVL 94
Query: 121 SMHHDLHRERLKVDASFL-STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
++ H +L +D L S A+ + G L +RT + ++LIT
Sbjct: 95 ALTVHTHAVKLGLDRFVLVSNALIRVHA--GFLGSLADGLLLLRTAAAVDASTFNTLITA 152
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y++ + DA +F+EMP RN VSW+A++ + Q L ++ M+ + P+D
Sbjct: 153 YARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVL 212
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+L+AC GAL QG+ H G + +L+ MY KCG V+ A+ VF M
Sbjct: 213 VGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQY 272
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K++++W +MI G A HG A+ LF +M ++PD I F+GV+ +C H GLV++G+
Sbjct: 273 KNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGREL 332
Query: 360 FDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
FDSM K+G+KP+++HY C+VDLL R G L EA++ I++MP+ P+A+IW A
Sbjct: 333 FDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHK 392
Query: 410 --------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
A+ +LLEP+ + +V L+N+YA A +R LM++KG+ PGCS +
Sbjct: 393 NVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTV 452
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL--GYVPEVHEEKVD 509
E+ V+++F D S+ R+ +IL + +D L GY+P++ E +D
Sbjct: 453 EVNGVIHQFIVGDLSHPRIKDILSKW-YEIDTRIRLEEGYIPDMKEVLLD 501
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS----G 250
++P R+V A+I A ++ + + L LY + + L P T S+L + S G
Sbjct: 32 QLP-RSVELHDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPG 90
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK-CGNVEEAVYVFNNMHGKDIVSWNSMI 309
A + H +++G ++ V+N+LI ++ G++ + + + D ++N++I
Sbjct: 91 AAVLALTVHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLI 150
Query: 310 AGYAQHGLAVRAIDLFEE-------------------------------MMKQRVKPDAI 338
YA+ G A LF+E M + V+PD
Sbjct: 151 TAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDT 210
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+GV+++C G +E+GK + HG+K L + +VD+ + G ++ A D ++M
Sbjct: 211 VLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERM 270
Query: 399 PIYPNAVIW 407
Y N + W
Sbjct: 271 Q-YKNVLAW 278
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 227/402 (56%), Gaps = 21/402 (5%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVG 173
+ ++ I++ H++ LK ++ + C + + G C ++ G + + ++G
Sbjct: 499 NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLG 558
Query: 174 SSLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
+SL+ +Y + + DA +F E ++++V WTA+I+ Q D+ L LYR MR++ +
Sbjct: 559 TSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNI 618
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
P+ TF ++L AC +L GR H GF +++L+ MY KCG+V+ +V
Sbjct: 619 SPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQ 678
Query: 293 VFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF + K D++SWNSMI G+A++G A A+ +F+EM + + PD +TFLGV+++C H G
Sbjct: 679 VFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAG 738
Query: 352 LVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--- 407
V EG+ FD M +G++P +DHY+C+VDLLGR G L+EA +FI ++ + PNA+IW
Sbjct: 739 WVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANL 798
Query: 408 --------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
AA+ + LEP+ ++ +V L+N+YA WD+A +R+ M K ++
Sbjct: 799 LGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQ 858
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
PGCSWI + F A D S++ EI L L +K
Sbjct: 859 KIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLTALIK 900
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 155/283 (54%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++ H + + +K S L++ +++ S + G AI+ GF +++YV SSL
Sbjct: 199 EEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSL 258
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y KC++ DA +VF+ + +N++ W A++ ++Q + +EL+ M + + P++
Sbjct: 259 INMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDE 318
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+TSILS C L GR H I+ F S + V N+LI MY K G ++EA F +
Sbjct: 319 FTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEH 378
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D +SWN++I GY Q + A LF M+ + PD ++ ++S+C + ++E G
Sbjct: 379 MTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAG 438
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + K GL+ L S ++D+ + G +++A MP
Sbjct: 439 QQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMP 481
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 144/278 (51%), Gaps = 3/278 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L++ +++CG+ + + G + CL+++ G N++ GSSLI +YSKC I DA+K +
Sbjct: 418 DEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTY 477
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
MP R+VVS A+IA +A + + L M+ L+P++ TF S++ C GS +
Sbjct: 478 SSMPERSVVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVI 536
Query: 254 QGRSAHCQTIRMGFFSYIQ-VANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAG 311
G HC ++ G + + SL+ MY + +A +F+ K IV W ++I+G
Sbjct: 537 LGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISG 596
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+ Q+ + A++L+ EM + PD TF+ V+ +C + +G+ + G +
Sbjct: 597 HIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLD 656
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S +VD+ + G ++ + +++ + + W +
Sbjct: 657 ELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNS 694
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 136/265 (51%), Gaps = 7/265 (2%)
Query: 151 IRGGAPYQCLAI----RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSW 204
++ G P++ L I R + + +++ Y + DA ++F++MP+ RNVV+W
Sbjct: 126 VQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAW 185
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+I+ A+ + L + M ++ + T S+LSA AL G H I+
Sbjct: 186 NVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIK 245
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
GF S I VA+SLI+MY KC ++A VF+ + K+++ WN+M+ Y+Q+G ++L
Sbjct: 246 QGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMEL 305
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F +M+ + PD T+ ++S+C +E G+ ++ K L + ++D+ +
Sbjct: 306 FLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAK 365
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
AG L+EA + M Y + + W A
Sbjct: 366 AGALKEAGKHFEHMT-YRDHISWNA 389
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 149/305 (48%), Gaps = 20/305 (6%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++ +++C + G I+ F +N++V ++LI +Y+K + +A K FE M
Sbjct: 322 TSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTY 381
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+ +SW AII + QE L+R M + P++ + SILSAC L G+
Sbjct: 382 RDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQF 441
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
HC ++++G + + +SLI MY KCG++++A +++M + +VS N++IAGYA
Sbjct: 442 HCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTK 501
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+I+L EM +KP ITF +I C+ V G ++ K GL C
Sbjct: 502 -ESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLL-------CG 553
Query: 379 VDLLGRAGL--------LEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANL 430
+ LG + L L +A + + V+W A S ++ EC+ + NL
Sbjct: 554 SEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISG-HIQNECSDVAL---NL 609
Query: 431 YAGVR 435
Y +R
Sbjct: 610 YREMR 614
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 119/283 (42%), Gaps = 47/283 (16%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + +++C +N+ G I++G + + +LI LY+KC + A +F
Sbjct: 46 DQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIF 105
Query: 194 EEMPVRNV--VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
P ++ VSWTA+I+ + Q L ++ MRNS + P+ ++L+A
Sbjct: 106 ASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVLNA------ 158
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM--HGKDIVSWNSMI 309
Y G +++A +F M +++V+WN MI
Sbjct: 159 -----------------------------YISLGKLDDACQLFQQMPIPIRNVVAWNVMI 189
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+G+A+ A+ F +M K VK T V+S+ + G + K G +
Sbjct: 190 SGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFE 249
Query: 370 PELDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYPNAVIWEA 409
+ S ++++ G+ + ++AR D I Q N ++W A
Sbjct: 250 SSIYVASSLINMYGKCQMPDDARQVFDAISQ----KNMIVWNA 288
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L+ Y NS P+ FTF LSAC L GR+ H I+ G S +LI +
Sbjct: 32 LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHL 91
Query: 281 YCKCGNVEEAVYVFNNMHGKDI--VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
Y KC ++ A +F + + VSW ++I+GY Q GL A+ +F++M V PD +
Sbjct: 92 YAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQV 150
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSM 363
+ V+++ G +++ F M
Sbjct: 151 ALVTVLNAYISLGKLDDACQLFQQM 175
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 18/359 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+R G A++ +G++LI Y+KC + A +VF+E+P+R+V +W A+IA AQ + L
Sbjct: 127 LRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEAL 186
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
L+ MR + N+ + L+AC+ GAL G H +M +QV N++I MY
Sbjct: 187 ALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNAVIDMY 246
Query: 282 CKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
KCG ++ VF+ M GK +V+WN+MI +A HG RA++LFEEM K +V+ D++T+
Sbjct: 247 AKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEMDSVTY 306
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
L V+ +C H GLVEEG FD M G+ + HY VVDLLGRAG L EA I MPI
Sbjct: 307 LAVLCACNHAGLVEEGVRLFDEMVGRGVNRNVKHYGSVVDLLGRAGRLGEAYRIINSMPI 366
Query: 401 YPNAVIW-------------EAAE--SRLLLE--PECAATHVQLANLYAGVRCWDQAARV 443
P+ V+W E AE SR L+E V L+N+YA W+ RV
Sbjct: 367 VPDVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRV 426
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
R+ MK + ++ PG S+IE+ V+++F D+S+ EI LD + ++K GYV E
Sbjct: 427 REAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIKAFGYVAE 485
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 88/179 (49%)
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+++L P+ TF+ L A + AL + H +R G + I + +LI Y KCG+++
Sbjct: 93 STILHPDALTFSFSLIASARALALSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLD 152
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A VF+ + +D+ +WN++IAG AQ + A+ LF M + K + I+ LG +++C
Sbjct: 153 SAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAEGEKINEISVLGALAACS 212
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G + G+ + K L + + V+D+ + G ++ M + V W
Sbjct: 213 QLGALRAGEGVHACVRKMDLDINVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTW 271
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ + + E K++ + A+ +C +R G + NV V +++I +
Sbjct: 186 LALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNAVIDM 245
Query: 180 YSKCRVIIDAYKVFEEMPV-RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
Y+KC ++VF M ++VV+W +I AFA LEL+ M + +E + T
Sbjct: 246 YAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEMDSVT 305
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ ++L AC +G + +G + + G ++ S++ + + G + EA + N+M
Sbjct: 306 YLAVLCACNHAGLVEEGVRLFDEMVGRGVNRNVKHYGSVVDLLGRAGRLGEAYRIINSMP 365
Query: 299 -GKDIVSWNSMIAGYAQHG 316
D+V W S++ +G
Sbjct: 366 IVPDVVLWQSLLGACKTYG 384
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 207/361 (57%), Gaps = 23/361 (6%)
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
+ + +R+ N ++I+ + ++ A++VF+ MP + VSWTA+I + +
Sbjct: 162 FDAMPVRSAVTYN-----TVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 216
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
D ++ +R M +EP+ T +++SAC GALG G H +R G +++ANS
Sbjct: 217 HDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANS 276
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI MY +CG VE A VF+ M + +VSWNSMI G+A +G A++ FE M ++ KPD
Sbjct: 277 LIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPD 336
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
A+TF GV+++C HGGL +EG Y+D M A++G+ ++HY CVVDLLGR+G LEEA +
Sbjct: 337 AVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVV 396
Query: 396 KQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWD 438
MP+ PN V+ A + L L+P A +V L+N+YA V WD
Sbjct: 397 TTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWD 456
Query: 439 QAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
A +VR LMK +GL+ PG S +EI V+ F + D+S+ + EI +L L+ +M
Sbjct: 457 GAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLLMHEMAGHD 516
Query: 499 Y 499
Y
Sbjct: 517 Y 517
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 2/209 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D L +++C + G L +R G NV + +SLI +Y++C + A
Sbjct: 232 VEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELAR 291
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF M R VVSW ++I FA + +E + MR +P+ TFT +L+AC+ G
Sbjct: 292 QVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGG 351
Query: 251 ALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSM 308
+G R G + ++ ++ + + G +EEA+ V M + + V ++
Sbjct: 352 LTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGAL 411
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+AG HG A L + +++ DA
Sbjct: 412 LAGCRMHGDVGMAEQLMQHLLELDPGGDA 440
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 38/236 (16%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRN--SMLEPNDFTFTSILSACTGSGALGQGR- 256
+V SWT+ IA A++ + M + + PND T ++LSAC S + R
Sbjct: 63 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLARR 122
Query: 257 ---SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
S H + +++ F S++ ++ L+ Y A+ +F+ M + V++N++I+G
Sbjct: 123 LALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLM 181
Query: 314 QHGLAV-------------------------------RAIDLFEEMMKQRVKPDAITFLG 342
++GL AID F M+ V+PD +T +
Sbjct: 182 RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIA 241
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
VIS+C G + G + + GL+ + + ++D+ R G +E AR M
Sbjct: 242 VISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFSGM 297
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 209/360 (58%), Gaps = 19/360 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+T + VG++L+ YSK +A +F+ + ++VVSW+A++ +AQ D
Sbjct: 431 IKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGAT 490
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTG-SGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++ M L+PN+FT +S++ AC + + GR H +I+ + V+++L+SM
Sbjct: 491 NIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSM 550
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y + G++E A +F +D+VSWNSM++GYAQHG + +A+D+F +M + ++ D +TF
Sbjct: 551 YARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTF 610
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
L VI C H GLVEEG+ YFDSMA+ +G+ P ++HY+C+VDL RAG L+EA I+ M
Sbjct: 611 LSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMS 670
Query: 400 IYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
++W AAE L LEP +AT+V L+N+Y+ W +
Sbjct: 671 FPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDE 730
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VRKLM K +K GCSWI+I N V+ F A DKS+ +I L + ++K GY P+
Sbjct: 731 VRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPD 790
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 160/330 (48%), Gaps = 13/330 (3%)
Query: 93 TGTNSTFGSSNVFDQL-----LDTPVVDVEKLISMHH------DLHR-ERLKVDASFLST 140
T N G+ FD++ LD + D + S+H D+HR +V L
Sbjct: 49 TNLNDATGARQAFDEIPHRNTLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVG 108
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
+ CGS + G L IR G +V VG+SL+ +Y K ++D KVFE MP R
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NVV+WT+++ + Q+ + +EL+ MR + PN TF S+LS G + GR H
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
Q+++ G S + V NSL++MY KCG VEEA VF M +D+VSWN+++AG +G +
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDL 288
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A+ LF + T+ VI C + + + S+ K G + + ++
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALM 348
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
D +AG L A D M N V W A
Sbjct: 349 DAYSKAGQLGNALDIFLLMSGSQNVVSWTA 378
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 134/280 (47%), Gaps = 7/280 (2%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D+E L + HD + S +T + C + + + ++ GF + V +
Sbjct: 287 DLEAL-QLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMT 345
Query: 175 SLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+L+ YSK + +A +F M +NVVSWTA+I Q V + L+ MR +
Sbjct: 346 ALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVA 405
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PNDFT+++IL+A S H Q I+ + V +L++ Y K N EEA+ +
Sbjct: 406 PNDFTYSTILTASVAS----LPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSI 461
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH-GGL 352
F + KD+VSW++M+ YAQ G + A ++F +M +KP+ T VI +C
Sbjct: 462 FKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAG 521
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
V+ G+ + KH L S +V + R G +E A+
Sbjct: 522 VDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQ 561
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 131 LKVDASFLSTAVTSCGS-TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
LK + +S+ + +C S T + G + ++I+ + V S+L+++Y++ I A
Sbjct: 501 LKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESA 560
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
+FE R++VSW ++++ +AQ L+++R M +E + TF S++ C +
Sbjct: 561 QCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHA 620
Query: 250 GALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
G + +G+ R G ++ ++ +Y + G ++EA+ + M
Sbjct: 621 GLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGM 669
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 244/446 (54%), Gaps = 56/446 (12%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS------ 181
R+ L D V SC I G+ I+ GF +VYV +SL+ +Y+
Sbjct: 112 RQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTE 171
Query: 182 -------------------------KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
KC + A K+F++MP +N+V+W+ +I+ +AQ
Sbjct: 172 AATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNH 231
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
D +EL++++++ + N+ S++S+C GAL G AH ++ G + + +
Sbjct: 232 FDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTA 291
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
L+ MY +CG++++AV+VF ++ +D +SW ++IAG A HG + R++ F M++ + P
Sbjct: 292 LVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPR 351
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
ITF V+S+C HGGLVE G F+SM + H ++P L+HY C+VDLLGRAG LEEA F+
Sbjct: 352 DITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFV 411
Query: 396 KQMPIYPNAVIWEA----------AE-----SRLLLE--PECAATHVQLANLYAGVRCWD 438
+MP+ PNA +W A AE ++L++ P+ + +V L+N+YA + W+
Sbjct: 412 LKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWE 471
Query: 439 QAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
+ +R++MK KGLK PG S IE+ V++F D S+ + +I + + ++ +++ G
Sbjct: 472 KVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAG 531
Query: 499 Y-------VPEVHEEKVDDASHKRTE 517
Y + ++ EE+ + A H+ +E
Sbjct: 532 YRGNTADALFDIDEEEKESALHRHSE 557
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 123/273 (45%), Gaps = 35/273 (12%)
Query: 162 IRTGFIANVYVGSSLITL----YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
IRT I +V+ S LI S +I A ++F ++ N+ + A+I +
Sbjct: 41 IRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNP 100
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
D Y + L P++ TF ++ +CT + G AH I+ GF + V NSL
Sbjct: 101 DQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSL 160
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNS------------------------------ 307
+ MY G+ E A +F M+ D+VSW S
Sbjct: 161 VHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWS 220
Query: 308 -MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
MI+GYAQ+ +A++LF+ + Q V+ + + VISSC H G +E G+ D + K+
Sbjct: 221 TMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKN 280
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G+ L + +VD+ R G +++A + +P
Sbjct: 281 GMTLNLILGTALVDMYARCGSIDKAVWVFEDLP 313
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 221/398 (55%), Gaps = 34/398 (8%)
Query: 124 HDLHRERLKVDASFLSTAV---TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
H + R+RL+ D + V CG T R + + R+ V +S++ Y
Sbjct: 35 HMVKRDRLRDDMVLNNALVDMYAKCGRTWEAR--CIFDSMPSRS-----VVSETSILAGY 87
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
+K + DA VF +M +NV++W +IAA+AQ + + + L+ ++ + P +T+
Sbjct: 88 AKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYG 147
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGF-FSY-----IQVANSLISMYCKCGNVEEAVYVF 294
++L+AC L G+ AH ++ GF F + + V NSL+ MY K G++++ VF
Sbjct: 148 NVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVF 207
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +D VSWN+MI GYAQ+G A A+ LFE M+ PD++T +GV+S+C H GLV+
Sbjct: 208 ERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVD 267
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
EG+ +F M + HG+ P DHY+C+VDLLGRAG L+EA + IK MP P++V+W
Sbjct: 268 EGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGA 327
Query: 408 ----------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
E RL L+PE + +V L+N+YA + W RVR+ MKD+G+ P
Sbjct: 328 CRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQP 387
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
GCSWIEI + + F A D + +EI L + +M
Sbjct: 388 GCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 425
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCG------- 285
P++ T +S++SAC G A +GR H + R + + N+L+ MY KCG
Sbjct: 8 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 67
Query: 286 ------------------------NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
NVE+A VF+ M K++++WN +IA YAQ+G A
Sbjct: 68 IFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEA 127
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK----PELDHY-- 375
I LF ++ + + P T+ V+++C + +++ G+ + K G + PE D +
Sbjct: 128 IRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVG 187
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD+ + G +++ ++M N V W A
Sbjct: 188 NSLVDMYLKTGSIDDGAKVFERMAARDN-VSWNA 220
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 221/398 (55%), Gaps = 34/398 (8%)
Query: 124 HDLHRERLKVDASFLSTAV---TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
H + R+RL+ D + V CG T R + + R+ V +S++ Y
Sbjct: 277 HMVKRDRLRDDMVLNNALVDMYAKCGRTWEAR--CIFDSMPSRS-----VVSETSILAGY 329
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
+K + DA VF +M +NV++W +IAA+AQ + + + L+ ++ + P +T+
Sbjct: 330 AKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYG 389
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGF-FSY-----IQVANSLISMYCKCGNVEEAVYVF 294
++L+AC L G+ AH ++ GF F + + V NSL+ MY K G++++ VF
Sbjct: 390 NVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVF 449
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +D VSWN+MI GYAQ+G A A+ LFE M+ PD++T +GV+S+C H GLV+
Sbjct: 450 ERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVD 509
Query: 355 EGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------ 407
EG+ +F M + HG+ P DHY+C+VDLLGRAG L+EA + IK MP P++V+W
Sbjct: 510 EGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGA 569
Query: 408 ----------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
E RL L+PE + +V L+N+YA + W RVR+ MKD+G+ P
Sbjct: 570 CRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQP 629
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
GCSWIEI + + F A D + +EI L + +M
Sbjct: 630 GCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 163/322 (50%), Gaps = 39/322 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H + ++A ++A+++C + +++R G L R+ +V++G++L+ +Y+KC
Sbjct: 142 MHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCER 201
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+DA +VF+ MP RNVVSW ++I + Q V L L+ M + P++ T +S++SA
Sbjct: 202 PVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSA 261
Query: 246 CTGSGALGQGRSAHCQTI-RMGFFSYIQVANSLISMYCKCG------------------- 285
C G A +GR H + R + + N+L+ MY KCG
Sbjct: 262 CAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVS 321
Query: 286 ------------NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
NVE+A VF+ M K++++WN +IA YAQ+G AI LF ++ + +
Sbjct: 322 ETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK----PELDHY--SCVVDLLGRAGL 387
P T+ V+++C + +++ G+ + K G + PE D + + +VD+ + G
Sbjct: 382 WPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGS 441
Query: 388 LEEARDFIKQMPIYPNAVIWEA 409
+++ ++M N V W A
Sbjct: 442 IDDGAKVFERMAARDN-VSWNA 462
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 3/236 (1%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ--VDMCLELY 224
+ N + ++L++ Y++ +A +FE +P + S+ A++AA A+ + L
Sbjct: 80 LRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFL 139
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M N ++F S LSAC L G H R + + +L+ MY KC
Sbjct: 140 AAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKC 199
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
+A VF+ M +++VSWNS+I Y Q+G A+ LF EMM PD +T V+
Sbjct: 200 ERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVM 259
Query: 345 SSCRHGGLVEEGKVYFDSMAKHG-LKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
S+C EG+ M K L+ ++ + +VD+ + G EAR MP
Sbjct: 260 SACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP 315
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+L R+AH ++ + N+L+S Y + G + EA VF+ + ++ S+N++++
Sbjct: 32 SLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLS 91
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS-CRHG 350
YA+ G A LFE + PD ++ V+++ RHG
Sbjct: 92 AYARLGRPDEARALFEAI----PDPDQCSYNAVVAALARHG 128
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 219/385 (56%), Gaps = 18/385 (4%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+ A+ +++A+ C S ++ G L ++G A++ +SL+++Y+K +I +A
Sbjct: 305 LSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMF 364
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+E+ V++ +S+ A+++ Q + + +++ M+ +EP+ T S++ AC+ AL
Sbjct: 365 FDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAAL 424
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
G+ +H I G + NSLI MY KCG ++ + VF+ M +D+VSWN+MIAGY
Sbjct: 425 QHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGY 484
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPE 371
HGL A LF M Q PD +TF+ +I++C H GLV EGK +FD+M K+G+ P
Sbjct: 485 GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPR 544
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------------AESRLL- 415
++HY C+VDLL R GLL+EA FI+ MP+ + +W A SR++
Sbjct: 545 MEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQ 604
Query: 416 -LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
L PE V L+N+++ +D+AA VR + K KG K +PG SWIEI ++ F D
Sbjct: 605 KLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGD 664
Query: 475 KSNTRLSEILPVLDFLVDQMKTLGY 499
+S+ +I LD ++ +K LGY
Sbjct: 665 QSHPCSRDIYHELDNIMVDIKKLGY 689
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 5/286 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I ++ + R R+ + + +C + ++R G A G +++V ++LI L
Sbjct: 85 IDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDL 144
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL-ELYRMMRNSMLEPNDFT 238
Y +C A VF +MP+R+VV+W A++A +A + L M + L PN T
Sbjct: 145 YIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAST 204
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGF---FSYIQVANSLISMYCKCGNVEEAVYVFN 295
S+L GAL QG S H +R + + +L+ MY KC + A VF+
Sbjct: 205 LVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFH 264
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV-KPDAITFLGVISSCRHGGLVE 354
M ++ V+W+++I G+ A +LF++M+ + + A + + C +
Sbjct: 265 GMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLH 324
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
G +AK G+ +L + ++ + +AGL+ EA F ++ +
Sbjct: 325 MGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAV 370
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF+ +P + ++ A+I A++ ++LYR M + PN +TF +L AC+
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
L GR+ H G + + V+ +LI +Y +C A VF M +D+V+WN+M
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVIS-SCRHGGLVEEGKVY 359
+AGYA HG+ AI +M ++P+A T + ++ +HG L + ++
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D + + + + +C ++ G I G + +SLI +Y+KC I +
Sbjct: 404 MEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSR 463
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF++MP R+VVSW +IA + L+ M+N P+D TF +++AC+ SG
Sbjct: 464 QVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523
Query: 251 ALGQGRS-AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSM 308
+ +G+ T + G ++ ++ + + G ++EA +M K D+ W ++
Sbjct: 524 LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGAL 583
Query: 309 IAGYAQHGLAVRAIDLFEEMMK--QRVKPDA 337
+ H + IDL +++ + Q++ P+
Sbjct: 584 LGACRIH----KNIDLGKQVSRIIQKLGPEG 610
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G + A VF+ + D ++N++I Y+ G AIDL+ M++ RV P+ TF V+
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C + G+ A GL +L + ++DL R AR+ +MP+ +
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR-DV 166
Query: 405 VIWEA 409
V W A
Sbjct: 167 VAWNA 171
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 217/399 (54%), Gaps = 51/399 (12%)
Query: 163 RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM-------------------------- 196
+ G +N+ + ++LI +Y+KC ++DA+KVF+ M
Sbjct: 147 KFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQMRKAGA 206
Query: 197 -----PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
P R +VSWTA+I+ + + L ++R M+ +EP++ + S+L AC GA
Sbjct: 207 LFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGA 266
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L G+ H R G + N+L+ MY KCG + +A +F+ M D++SW++MI G
Sbjct: 267 LEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGG 326
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKP 370
A HG A AI+LF+ M K +++P+ ITFLG++S+C H G EG YFDSM+K + ++P
Sbjct: 327 LANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEP 386
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
E++HY C+VD+LGRAG L +A D I++MP+ P++ IW A E
Sbjct: 387 EVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHL 446
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
LEP+ +V L+N+YA + WD +R+RKL+K K +K PG S I+I NVV F +
Sbjct: 447 EELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSLIDINNVVQEFVSW 506
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDAS 512
D S +I +L+ L T P + E ++D S
Sbjct: 507 DDSKPFSRDIFWLLELLTSHQDTTD--PHLIEIMLEDGS 543
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ FTF ++ +C+G G+ H + G S I + N+LI MY KC ++ +A V
Sbjct: 117 PDRFTFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKV 176
Query: 294 FNNMHGKDIVSWNS-------------------------------MIAGYAQHGLAVRAI 322
F+ M +D +SWNS MI+GY + G A+
Sbjct: 177 FDGMVERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADAL 236
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
+F +M V+PD I+ + V+ +C G +E GK ++GL + + ++++
Sbjct: 237 YVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMY 296
Query: 383 GRAGLLEEARDFIKQM 398
+ G + +A QM
Sbjct: 297 SKCGCIGQAYQLFDQM 312
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 7/195 (3%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
+ + +C + G R G + + ++L+ +YSKC I AY++F++M
Sbjct: 256 SVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKG 315
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+V+SW+ +I A + +EL++ M+ + +EPN TF +LSAC +G +G A+
Sbjct: 316 DVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGL-AY 374
Query: 260 CQTIRMGFFSYIQVAN--SLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHG 316
++ + +V + L+ + + G + +A+ V M K D W S+++ H
Sbjct: 375 FDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHS 434
Query: 317 ---LAVRAIDLFEEM 328
+A+ A++ EE+
Sbjct: 435 NLDIAIIAMEHLEEL 449
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 224/415 (53%), Gaps = 24/415 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I +++ + + S + +++CG TR+ G GF +N+ + ++L
Sbjct: 245 EEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNAL 304
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y KC A ++F+ + ++V+SW +I ++ + L L+ +M S ++PND
Sbjct: 305 IDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPND 364
Query: 237 FTFTSILSACTGSGALGQGRSAHC---QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
TF IL AC GAL G+ H + +R S + SLI MY KCG +E A V
Sbjct: 365 VTFLGILHACACLGALDLGKWVHAYIDKNLRNS--SNASLWTSLIDMYAKCGCIEAAERV 422
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGL 352
F +MH +++ SWN+M++G+A HG A RA+ LF EM+ K +PD ITF+GV+S+C GL
Sbjct: 423 FRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGL 482
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-- 409
V+ G YF SM + +G+ P+L HY C++DLL RA EEA +K M + P+ IW +
Sbjct: 483 VDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLL 542
Query: 410 ---------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
AE LEPE A V L+N+YAG WD AR+R + DKG+K
Sbjct: 543 SACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKK 602
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
PGC+ IEI V+ F DK + + I +L+ + ++ G+VP E D
Sbjct: 603 VPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYD 657
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 133/230 (57%), Gaps = 9/230 (3%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LIT Y + DA ++F+E+PV++VVSW A+I+ + Q + + + + M+ + +
Sbjct: 201 TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVL 260
Query: 234 PNDFTFTSILSAC--TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
PN T +LSAC T SG LG+ + + GF S +Q+ N+LI MYCKCG + A
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVRD--NGFGSNLQLTNALIDMYCKCGETDIAR 318
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F+ + KD++SWN+MI GY+ L A+ LFE M++ VKP+ +TFLG++ +C G
Sbjct: 319 ELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLG 378
Query: 352 LVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++ GK Y D ++ L ++ ++D+ + G +E A + M
Sbjct: 379 ALDLGKWVHAYIDKNLRNSSNASL--WTSLIDMYAKCGCIEAAERVFRSM 426
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 9/227 (3%)
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMPVR---NVVS 203
+NI L I+TG V+V S LI S + A +FEE NV
Sbjct: 39 KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFI 98
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W ++I ++ L L+ M ++PN TF + +CT + A +G+ H +
Sbjct: 99 WNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHAL 158
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
++ V S+I MY G ++ A VF+ +D VS+ ++I GY G A
Sbjct: 159 KLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARR 218
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
LF+E+ + D +++ +IS G EE V F M + + P
Sbjct: 219 LFDEIPVK----DVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLP 261
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC---GNVEEAVYVF- 294
+ ++L C Q H I+ G + + V + LI +C G++ A+ +F
Sbjct: 31 YLNLLEKCKNINTFKQ---IHSLIIKTGLNNTVFVQSKLIH-FCAVSPSGDLSYALSLFE 86
Query: 295 -NNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
N H K ++ WNS+I GY+ + ++ LF M+ V+P++ TF + SC
Sbjct: 87 ENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKA 146
Query: 353 VEEGKVYFDSMAKHGLKPELDH----YSCVVDLLGRAGLLEEAR 392
EGK + H LK L ++ V+ + G ++ AR
Sbjct: 147 THEGK----QLHAHALKLALHFNPHVHTSVIHMYASVGEMDFAR 186
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 233/405 (57%), Gaps = 22/405 (5%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I ++ + E + D +++ + +CGS +R G A++ GF +N V ++ L
Sbjct: 122 IQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMEL 181
Query: 180 YSKCRVIIDAYKVFEEMP----VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
Y KC + DA +VFEEMP ++ V WTA+I F + + + LE +R M+ + PN
Sbjct: 182 YGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPN 241
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+FT +LSAC+ GAL GR H + + V N+LI+MY +CG+++EA VF+
Sbjct: 242 EFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFD 301
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M +D++++N+MI+G + +G + +AI+LF M+ +R++P +TF+GV+++C HGGLV+
Sbjct: 302 EMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDF 361
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES-- 412
G F SMA+ + ++P+++HY C+VDLLGR G LEEA D I+ M + P+ ++ S
Sbjct: 362 GFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSAC 421
Query: 413 ----RLLLEPECA-----------ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
L L + A T+V L+++YA W +AA+VR MK+ G++ PG
Sbjct: 422 KMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPG 481
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
CS IE+ N ++ F D + + I L+ L ++ GY PE
Sbjct: 482 CSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPE 526
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 6/256 (2%)
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+R+I P IR G + ++ L+ SKC I A ++F+ NV +TA+
Sbjct: 49 SRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTAL 108
Query: 208 IAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
I F ++LY RM+ S+L P+++ SIL AC AL +GR H + +++G
Sbjct: 109 IDGFVSSGNYLEAIQLYSRMLHESIL-PDNYLMASILKACGSQLALREGREVHSRALKLG 167
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMH----GKDIVSWNSMIAGYAQHGLAVRAI 322
F S V ++ +Y KCG + +A VF M KD V W +MI G+ ++ RA+
Sbjct: 168 FSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRAL 227
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
+ F M + V+P+ T + V+S+C G +E G+ M K ++ L + ++++
Sbjct: 228 EAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMY 287
Query: 383 GRAGLLEEARDFIKQM 398
R G ++EA+ +M
Sbjct: 288 SRCGSIDEAQTVFDEM 303
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
I+S S + Q H Q IR G + L+ KC ++ A +F H +
Sbjct: 42 IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 101
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+ + ++I G+ G + AI L+ M+ + + PD ++ +C + EG+
Sbjct: 102 VYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHS 161
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP---IYPNAVIWEA 409
K G +++L G+ G L +AR ++MP + + V W A
Sbjct: 162 RALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTA 212
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 201/346 (58%), Gaps = 18/346 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S+I Y+KC I AY++F MP RN++SWT++I+ + L L+ M+ + ++
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
++ S L AC G L QG+ H + + LI MY KCG++EEA+ V
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEV 307
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M K + W +MI+GYA HG A++ F +M V+P+ +TF G++++C H GLV
Sbjct: 308 FRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLV 367
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--- 409
E K+ F+SM + HG KP ++HY C+VDLLGRAGLL+EA + I+ MP+ PNA IW A
Sbjct: 368 HEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLN 427
Query: 410 --------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ + ++P ++ LA+++A W+QAARVR+ MK++G+
Sbjct: 428 ACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKL 487
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
PGCS I + + F A D+S+ ++ EI +L+ +V++++ GY P
Sbjct: 488 PGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKP 533
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 33/270 (12%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYK--VFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
++TG I + S L+ + AY VF+ + N W +I ++ + +
Sbjct: 42 LKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEE 101
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L LY M + N +TF +L AC+ A + + H I+MGF S I NSL++
Sbjct: 102 ALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLN 161
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ------------------------- 314
+Y K G+++ A +F+ + +D VSWNSMI GY +
Sbjct: 162 VYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSM 221
Query: 315 ------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
G A++LF M +K D + + + +C G++++GK + KH +
Sbjct: 222 ISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEI 281
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ + ++D+ + G LEEA + ++M
Sbjct: 282 EIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 206/360 (57%), Gaps = 18/360 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+++ F+++ V ++L T+YSK I A K+F+E P +++ SW A+I+ + Q + +
Sbjct: 346 LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
L+R M+ S PN T T ILSAC GAL G+ H F S I V+ +LI MY
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++ EA +F+ M K+ V+WN+MI+GY HG A+++F EM+ + P +TFL
Sbjct: 466 AKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFL 525
Query: 342 GVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
V+ +C H GLV+EG F+SM ++G +P + HY+C+VD+LGRAG L+ A FI+ M I
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585
Query: 401 YPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
P + +WE +E L+P+ HV L+N+++ R + QAA V
Sbjct: 586 EPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATV 645
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
R+ K + L PG + IEI + F + D+S+ ++ EI L+ L +M+ GY PE
Sbjct: 646 RQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPET 705
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
LK ++S + A+++ R+ R G A+ G + + +GS+++ +Y K + DA
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDAR 174
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGS 249
KVF+ MP ++ + W +I+ + + ++++R ++ S + T IL A
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
L G H + G +S+ V IS+Y KCG ++ +F DIV++N+MI
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
GY +G ++ LF+E+M + + T + ++ H L+
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 2/187 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I GF ++ + + L S I A +F + +V + ++ F+ L
Sbjct: 44 ILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSL 103
Query: 222 ELYRMMRNSM-LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++ +R S L+PN T+ +SA +G GR H Q + G S + + ++++ M
Sbjct: 104 SVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKM 163
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAIT 339
Y K VE+A VF+ M KD + WN+MI+GY ++ + V +I +F +++ + + D T
Sbjct: 164 YFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTT 223
Query: 340 FLGVISS 346
L ++ +
Sbjct: 224 LLDILPA 230
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 219/385 (56%), Gaps = 18/385 (4%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+ A+ +++A+ C S ++ G L ++G A++ +SL+++Y+K +I +A
Sbjct: 305 LSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMF 364
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+E+ V++ +S+ A+++ Q + + +++ M+ +EP+ T S++ AC+ AL
Sbjct: 365 FDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAAL 424
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
G+ +H I G + NSLI MY KCG ++ + VF+ M +D+VSWN+MIAGY
Sbjct: 425 QHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGY 484
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPE 371
HGL A LF M Q PD +TF+ +I++C H GLV EGK +FD+M K+G+ P
Sbjct: 485 GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPR 544
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------------AESRLL- 415
++HY C+VDLL R GLL+EA FI+ MP+ + +W A SR++
Sbjct: 545 MEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQ 604
Query: 416 -LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
L PE V L+N+++ +D+AA VR + K KG K +PG SWIEI ++ F D
Sbjct: 605 KLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGD 664
Query: 475 KSNTRLSEILPVLDFLVDQMKTLGY 499
+S+ +I LD ++ +K LGY
Sbjct: 665 QSHPCSRDIYHELDNIMVDIKKLGY 689
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 5/286 (1%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I ++ + R R+ + + +C + ++R G A G +++V ++LI L
Sbjct: 85 IDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDL 144
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL-ELYRMMRNSMLEPNDFT 238
Y +C A VF +MP+R+VV+W A++A +A + L M + L PN T
Sbjct: 145 YIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAST 204
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGF---FSYIQVANSLISMYCKCGNVEEAVYVFN 295
S+L GAL QG S H +R + + +L+ MY KC + A VF+
Sbjct: 205 LVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFH 264
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV-KPDAITFLGVISSCRHGGLVE 354
M ++ V+W+++I G+ A +LF++M+ + + A + + C +
Sbjct: 265 GMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLH 324
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
G +AK G+ +L + ++ + +AGL+ EA F ++ +
Sbjct: 325 MGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAV 370
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF+ +P + ++ A+I A++ ++LYR M + PN +TF +L AC+
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
L GR+ H G + + V+ +LI +Y +C A VF M +D+V+WN+M
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVIS-SCRHGGLVEEGKVY 359
+AGYA HG+ AI +M ++P+A T + ++ +HG L + ++
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D + + + + +C ++ G I G + +SLI +Y+KC I +
Sbjct: 404 MEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSR 463
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF++MP R+VVSW +IA + L+ M+N P+D TF +++AC+ SG
Sbjct: 464 QVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523
Query: 251 ALGQGRS-AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSM 308
+ +G+ T + G ++ ++ + + G ++EA +M K D+ W ++
Sbjct: 524 LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGAL 583
Query: 309 IAGYAQHGLAVRAIDLFEEMMK--QRVKPDA 337
+ H + IDL +++ + Q++ P+
Sbjct: 584 LGACRIH----KNIDLGKQVSRIIQKLGPEG 610
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G + A VF+ + D ++N++I Y+ G AIDL+ M++ RV P+ TF V+
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C + G+ A GL +L + ++DL R AR+ +MP+ +
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR-DV 166
Query: 405 VIWEA 409
V W A
Sbjct: 167 VAWNA 171
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 225/397 (56%), Gaps = 20/397 (5%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ E +K+DA +++ + C +I G I+ G ++V ++LI +Y+K
Sbjct: 85 EMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFG 144
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSIL 243
+ A KVF + +++VVSW +I +AQ +E+Y +M + + PN T+ SIL
Sbjct: 145 SLGHAQKVFG-LLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSIL 203
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
A + GAL QG H Q I+ +S + V LI MY KCG +++A+ +F + K+ V
Sbjct: 204 PAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSV 263
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
WN+MI+ Y HG +A++LF EM +RVKPD ITF+ ++S+C H GLV + + F+ M
Sbjct: 264 PWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMM 323
Query: 364 -AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA------------- 409
++G+KP L HY C+VDL GRAG LE A +FIK+MPI P+A W A
Sbjct: 324 EEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIEL 383
Query: 410 ---AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
A RL ++ E +V L+N+YA V W+ VR L +D+GL+ NPG S I + N
Sbjct: 384 GKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNN 443
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
V F ++++ + EI L L ++KT+GYVP+
Sbjct: 444 KVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPD 480
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 153/269 (56%), Gaps = 6/269 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
V +CG ++ G CL ++ GF +V+V +SL+ +YS+ ++ DA K+F++MP R+
Sbjct: 4 VKACG---DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDR 60
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
SW A+I+ + Q L++ MR ++ + T S+L C G + G+ H
Sbjct: 61 GSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLY 120
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
I+ G + V+N+LI+MY K G++ A VF + KD+VSWN++I GYAQ+GLA A
Sbjct: 121 VIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEA 179
Query: 322 IDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
I+++ M + + + P+ T++ ++ + H G +++G + K+ L ++ +C++D
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLID 239
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G+ G L++A Q+P N+V W A
Sbjct: 240 MYGKCGKLDDAISLFYQVP-RKNSVPWNA 267
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 20/219 (9%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
++ AC G L G+ HC +++GF + VA SL+ MY + G V +A +F++M +D
Sbjct: 3 VVKAC---GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
SWN+MI+GY Q+G A A+D+ +EM + VK DAIT V+ C G + GK+
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARD----FIKQMPIY--------PNAVIWEA 409
+ KHGL+ EL + ++++ + G L A+ IK + + N + EA
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASEA 179
Query: 410 AESRLLLEPE-----CAATHVQLANLYAGVRCWDQAARV 443
E LL+E T V + Y+ V Q R+
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRI 218
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 202/344 (58%), Gaps = 18/344 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++I+ + ++ A++VF+ MP + VSWTA+I + + D ++ +R M +E
Sbjct: 85 NTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVE 144
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T +++SAC GALG G H +R G +++ANSLI MY +CG VE A V
Sbjct: 145 PDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQV 204
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M + +VSWNSMI G+A +G A++ FE M ++ KPDA+TF GV+++C HGGL
Sbjct: 205 FSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLT 264
Query: 354 EEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--- 409
+EG Y+D M A++G+ ++HY CVVDLLGR+G LEEA + MP+ PN V+ A
Sbjct: 265 DEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALLA 324
Query: 410 --------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ L L+P A +V L+N+YA V WD A +VR LMK +GL+
Sbjct: 325 GCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRKR 384
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
PG S +EI V+ F + D+S+ + EI +L L+ +M Y
Sbjct: 385 PGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLLMHEMAGHDY 428
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 6/205 (2%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L +++C + G L +R G NV + +SLI +Y++C + A +VF
Sbjct: 146 DYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVF 205
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
M R VVSW ++I FA + +E + MR +P+ TFT +L+AC+ G
Sbjct: 206 SGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTD 265
Query: 254 QG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAG 311
+G R G + ++ ++ + + G +EEA+ V M + + V +++AG
Sbjct: 266 EGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALLAG 325
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPD 336
HG + + E++M+ ++ D
Sbjct: 326 CRMHG----DVGMAEQLMQHLLELD 346
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 234 PNDFTFTSILSACTGSGALGQGR----SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
PND T ++LSAC S + R S H + +++ F S++ ++ L+ Y
Sbjct: 10 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHL 68
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAV------------------------------ 319
A+ +F+ M + V++N++I+G ++GL
Sbjct: 69 ALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRH 128
Query: 320 -RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
AID F M+ V+PD +T + VIS+C G + G + + GL+ + + +
Sbjct: 129 DEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSL 188
Query: 379 VDLLGRAGLLEEARDFIKQM 398
+D+ R G +E AR M
Sbjct: 189 IDMYARCGQVELARQVFSGM 208
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 231/404 (57%), Gaps = 31/404 (7%)
Query: 133 VDASFLSTAVTSCG--STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
VD + + +++C S ++I G I+ GF ++ V ++L+ Y+KC + +
Sbjct: 259 VDPIAMVSVLSACSRVSEKSITEGV--HGFLIKRGFEGDLGVENTLMDAYAKCGELGVSR 316
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGS 249
+VF+ M R+V+SW +IIA +AQ +E++ RM+++ + N T +++L AC S
Sbjct: 317 RVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHS 376
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
G+ G+ H Q I+MG S + V S+I MYCKCG VE A F+ M K++ SW++M+
Sbjct: 377 GSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMV 436
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGL 368
AGY HG A A+++F EM VKP+ ITF+ V+++C H GL+EEG +F +M+ + +
Sbjct: 437 AGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDV 496
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AE 411
+P ++HY C+VDLLGRAG L+EA D IK M + P+ V+W A A
Sbjct: 497 EPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISAR 556
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
L+P+ +V L+N+YA W+ R+R LMK+ GL PG S ++I V+ F
Sbjct: 557 KLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFL 616
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV--------HEEK 507
D+ + + +I L+ L +++ +GYVP++ HEEK
Sbjct: 617 VGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEK 660
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 145/277 (52%), Gaps = 9/277 (3%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
LK + S A+ SC + ++ G A+ GF +++V S+L+ +YSKC + DA
Sbjct: 148 LKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDAR 207
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR--MMRNSMLEPND------FTFTSI 242
+F+E+ RN+VSWT++I + Q L L++ ++ S E + S+
Sbjct: 208 TLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSV 267
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
LSAC+ H I+ GF + V N+L+ Y KCG + + VF+ M +D+
Sbjct: 268 LSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDV 327
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+SWNS+IA YAQ+G++ ++++F M+K + +A+T V+ +C H G GK D
Sbjct: 328 ISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHD 387
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ K GL+ + + ++D+ + G +E AR +M
Sbjct: 388 QVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 424
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NV SW ++IA A+ L + MR L+PN TF + +C+ L GR AH
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
Q + GF + V+++L+ MY KCG + +A +F+ + ++IVSW SMI GY Q+ A
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235
Query: 320 RAIDLFEEMMKQ--------RVKPDAITFLGVISSCRHGG--LVEEGKVYFDSMAKHGLK 369
RA+ LF+E + + V D I + V+S+C + EG F + K G +
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF--LIKRGFE 293
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+L + ++D + G L +R M
Sbjct: 294 GDLGVENTLMDAYAKCGELGVSRRVFDGM 322
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 208/358 (58%), Gaps = 17/358 (4%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
L I+ GF + + S+LI +YSKC I DA VFE +++V W ++ + + + + +
Sbjct: 470 LIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEE 529
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+LY ++ S PN+FTF ++ +A + +L G+ H Q ++MG S + N+L+
Sbjct: 530 AFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVD 589
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY KCG+VEEA +F++ KD WNSMI+ YAQHG A+ +FE M+ + P+ +T
Sbjct: 590 MYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVT 649
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
F+ V+S+C H G VE+G +++SMA++G++P ++HY+ VV LLGRAG L EAR+FI++M
Sbjct: 650 FVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMT 709
Query: 400 IYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
I P A++W AAE + ++P + ++V L+N++A W R
Sbjct: 710 IRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKR 769
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
+R M G+ PG SWIE+ V+ F + DK + I LD L QMK +G V
Sbjct: 770 LRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDVGCV 827
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 204/427 (47%), Gaps = 31/427 (7%)
Query: 1 MNIIFLQTCRKKKPCSALQSLK-TLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRT 59
MN +L T + C S+ + + SF SQ +K +AL L +++P +
Sbjct: 1 MNWAYLPTT-STRSCKFFSSISPNVQPMLPSFSSQNVKVKG------RALANL-LLAPVS 52
Query: 60 RDST--KTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVE 117
S +VH +++ LQ D S H + S F + +FD++ + +V
Sbjct: 53 NKSILYYRKVHCQVVLWGLQYDV--FLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWS 110
Query: 118 KLISMHHDL-HRERL-------------KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIR 163
++SM+ L + E+ K++ L++ + +C G+ I+
Sbjct: 111 SVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIK 170
Query: 164 TGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLEL 223
+GF +VYVG+SL+ LY+K I A VF+ + ++ V+WTAII + + + ++ L+L
Sbjct: 171 SGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQL 230
Query: 224 YRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
+ +M S + P+ + +SIL+AC+ G L G+ H +R + N LI Y K
Sbjct: 231 FNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTK 290
Query: 284 CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
CG V+ +F+ + K+I+SW +MIAGY Q+ A++L EM + KPD V
Sbjct: 291 CGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSV 350
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP---- 399
++SC ++ G+ + K L+ + + ++D+ + L++A+ +
Sbjct: 351 LTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSV 410
Query: 400 IYPNAVI 406
+Y NA+I
Sbjct: 411 VYYNAMI 417
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 140/285 (49%), Gaps = 1/285 (0%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R K D S+ +TSCGS ++ G I+ + +V ++LI +YSKC
Sbjct: 334 EMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCN 393
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA +VF+ + +VV + A+I ++++ + LE+++ MR + P+ TF S+L
Sbjct: 394 ALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLG 453
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
L + H I+ GF +++LI +Y KC + +A YVF KDIV
Sbjct: 454 LSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVV 513
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WNS+ +GY + A L+ ++ R +P+ TF + ++ + G+ + + +
Sbjct: 514 WNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVM 573
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K GL+ + + +VD+ + G +EEA ++ + W +
Sbjct: 574 KMGLESDPFITNALVDMYAKCGSVEEAEKIFSS-SVWKDTACWNS 617
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 135/280 (48%), Gaps = 2/280 (0%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+ +KV L+ + + S ++I C + G +V++ + L+ Y K + D
Sbjct: 34 QNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFD 93
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A +F++MP RN+VSW+++++ + Q + L R + + N++ SI+ AC
Sbjct: 94 AGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACV 153
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G H I+ GF + V SL+ +Y K G +++A VF+ + K V+W +
Sbjct: 154 QRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTA 213
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
+I GY + G + ++ LF MM+ V PD ++++C G ++ GK + +
Sbjct: 214 IITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSE 273
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K ++ Y+ ++D + G ++ + ++ + N + W
Sbjct: 274 TKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDV-KNIISW 312
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 159/514 (30%), Positives = 259/514 (50%), Gaps = 73/514 (14%)
Query: 79 DSKHLDSQKFNHDFTGTNST---FG-------SSNVFDQLLDTPVVDVEKLIS------M 122
++KH+ Q +NS FG + +FD++L+ +V LI+ M
Sbjct: 297 EAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEM 356
Query: 123 HHD-------LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+ + +H+ + VD +A+++C + + G L+++ G + + + ++
Sbjct: 357 YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNA 416
Query: 176 LITLYSKCRVIIDAYKVFEE-------------------------------MPVRNVVSW 204
LI +YSKC I+ A K+F+E MP ++VVSW
Sbjct: 417 LIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSW 476
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+++I+ +AQ D L L++ M+ S +P++ T S++SAC AL QG+ H R
Sbjct: 477 SSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKR 536
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G + + +LI MY KCG VE A+ VF M K I +WN++I G A +GL ++D+
Sbjct: 537 NGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDM 596
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLG 383
F M K V P+ ITF+GV+ +CRH GLV+EG+ +F SM H ++P + HY C+VDLLG
Sbjct: 597 FSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLG 656
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQ 426
RAG L+EA + + +MP+ P+ W A + L+P+ HV
Sbjct: 657 RAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVL 716
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
L+N+YA WD +R +M + PGCS IE V++ F A DK++ + I +
Sbjct: 717 LSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDM 776
Query: 487 LDFLVDQMKTLGYVPEVHEEKVD-DASHKRTEPF 519
L + ++K GY P+++E +D D K + F
Sbjct: 777 LVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLF 810
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 140/330 (42%), Gaps = 93/330 (28%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ GF ++VYV ++LI +S C + DA +VF E V + VSW +I+A + + V+
Sbjct: 240 LKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAK 299
Query: 222 ELYRMMR---------------------------NSMLEPNDFTFTSI------------ 242
+Y M + MLE + T++++
Sbjct: 300 HIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEE 359
Query: 243 -----------------------LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
LSAC + G+ H ++++G SYI + N+LI
Sbjct: 360 AIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIY 419
Query: 280 MYCKCGN-------------------------------VEEAVYVFNNMHGKDIVSWNSM 308
MY KCG+ V+ A +F++M KD+VSW+SM
Sbjct: 420 MYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSM 479
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I+GYAQ+ L + LF+EM KPD T + VIS+C +E+GK + ++GL
Sbjct: 480 ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 539
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ + ++D+ + G +E A + M
Sbjct: 540 TINVILGTTLIDMYMKCGCVETALEVFYGM 569
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
A+ Q LY+ M ++ L +++T+ ++ AC+ + + + H +++GF S
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ V N+LI+ + C N+ +A VFN D VSWNS++AGY + G A ++ +M
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 330 KQRV--KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
++ + I G+ GLV E FD M L+ ++ +S ++ + +
Sbjct: 307 ERSIIASNSMIVLFGM------RGLVVEACKLFDEM----LEKDMVTWSALIACFQQNEM 356
Query: 388 LEEA-RDFI 395
EEA R F+
Sbjct: 357 YEEAIRTFV 365
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 207/360 (57%), Gaps = 18/360 (5%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
I+ F+ V + + +Y+K ++ A+KVFE +PV++V+SW +I +AQ
Sbjct: 211 GIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEA 270
Query: 221 LELYRMMRN-SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+E+Y+MM + PN T+ SIL A GAL QG H + I+ + VA LI
Sbjct: 271 IEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLID 330
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
+Y KCG + +A+ +F + + V+WN++I+ + HG A + + LF EM+ + VKPD +T
Sbjct: 331 VYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVT 390
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
F+ ++S+C H G VEEGK F M ++G+KP L HY C+VDLLGRAG LE A DFIK MP
Sbjct: 391 FVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP 450
Query: 400 IYPNAVIWEA----------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAAR 442
+ P+A IW A A RL ++ + +V L+N+YA V W+ +
Sbjct: 451 LQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDK 510
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VR L +++GLK PG S IE+ V F ++S+ + EI L L +MK+LGY+P+
Sbjct: 511 VRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPD 570
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 38/301 (12%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+ L + ++D +FL + T + + L + G + ++++ + L+ LY+
Sbjct: 11 YGLGNQNEEIDFNFLFDSSTKTPFAKCL------HALLVVAGKVQSIFISTRLVNLYANL 64
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE-LYRMMRNSMLEPNDFTFTSI 242
+ + F+++P ++V +W ++I+A+ + Y+++ S + P+ +TF +
Sbjct: 65 GDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV 124
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
L AC G L GR HC ++GF + VA SLI MY + G A +F++M +D+
Sbjct: 125 LKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDM 181
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
SWN+MI+G Q+G A +A+D+ +EM + +K + +T + ++ V+ D
Sbjct: 182 GSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILP------------VFVDM 229
Query: 363 MAKHGLK----------PELDHYSCVVDLLGRA--GLLEEARDFIKQM----PIYPNAVI 406
AK GL P D S + G A GL EA + K M I PN
Sbjct: 230 YAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGT 289
Query: 407 W 407
W
Sbjct: 290 W 290
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 212/369 (57%), Gaps = 21/369 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ G + + + +SL+ Y+ A K+F+EMPVR+ V+W +I +A+ + L
Sbjct: 148 VAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDAL 207
Query: 222 ELYRMMR--NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+L+ MR +S EP+D T +L AC+ GAL G G+ ++V NSLI+
Sbjct: 208 KLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLIT 267
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY +CG V++A VF+ K +V+W +MI+G A +G AI +FEEM++ V PD T
Sbjct: 268 MYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQT 327
Query: 340 FLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFI-KQ 397
F GV+S+C H GLV+EG +FD M ++GLKP + HY C+VDL+GRAGLL+EA +F+ +
Sbjct: 328 FTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNE 387
Query: 398 MPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQA 440
M + P+A IW E L+ L+ + A +V L N YA V W +
Sbjct: 388 MKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKV 447
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
+ +RKLM+++G++T PGC+ +E V+ F A+D ++ R EI L + Q++ GYV
Sbjct: 448 SEIRKLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYV 507
Query: 501 PEVHEEKVD 509
P V E D
Sbjct: 508 PNVSSELHD 516
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 235 NDFTFTSILSA-CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
N FT +L C+ L R H + G +A SL+ Y G+ + A +
Sbjct: 123 NAFTLAILLKPRCS----LAHARQLHANVVAEGHLRDALLATSLMRCYANRGDGDGARKL 178
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGG 351
F+ M +D V+WN +I YA++ A+ LFEEM + +PD +T + ++ +C G
Sbjct: 179 FDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLG 238
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAE 411
++ G+ + +HG EL + ++ + R G +++A P + V W A
Sbjct: 239 ALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTP-QKSVVTWTAMI 297
Query: 412 SRL 414
S L
Sbjct: 298 SGL 300
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 201/346 (58%), Gaps = 18/346 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S+I Y+KC I AY++F MP RN++SWT++I+ + L L+ M+ + ++
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
++ S L AC G L QG+ H + + LI MY KCG++EEA+ V
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEV 307
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M K + W +MI+GYA HG A++ F +M V+P+ +TF G++++C H GLV
Sbjct: 308 FRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLV 367
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--- 409
E K+ F+SM + HG KP ++HY C+VDLLGRAGLL+EA + I+ MP+ PNA IW A
Sbjct: 368 HEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLN 427
Query: 410 --------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ + ++P ++ LA+++A W+QAARVR+ MK++G+
Sbjct: 428 ACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKL 487
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
PGCS I + + F A D+S+ ++ EI +L+ +V++++ GY P
Sbjct: 488 PGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKP 533
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 33/270 (12%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYK--VFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
++TG I + S L+ + AY VF+ + N W +I ++ + +
Sbjct: 42 LKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEE 101
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L LY M + N +TF +L AC+ AL + + H I+MGF S I NSL++
Sbjct: 102 ALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLN 161
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ------------------------- 314
+Y K G+++ A +F+ + +D VSWNSMI GY +
Sbjct: 162 VYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSM 221
Query: 315 ------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
G A++LF M +K D + + + +C G++++GK + KH +
Sbjct: 222 ISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEI 281
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ + ++D+ + G LEEA + ++M
Sbjct: 282 EIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 159/514 (30%), Positives = 259/514 (50%), Gaps = 73/514 (14%)
Query: 79 DSKHLDSQKFNHDFTGTNST---FG-------SSNVFDQLLDTPVVDVEKLIS------M 122
++KH+ Q +NS FG + +FD++L+ +V LI+ M
Sbjct: 162 EAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEM 221
Query: 123 HHD-------LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+ + +H+ + VD +A+++C + + G L+++ G + + + ++
Sbjct: 222 YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNA 281
Query: 176 LITLYSKCRVIIDAYKVFEE-------------------------------MPVRNVVSW 204
LI +YSKC I+ A K+F+E MP ++VVSW
Sbjct: 282 LIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSW 341
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+++I+ +AQ D L L++ M+ S +P++ T S++SAC AL QG+ H R
Sbjct: 342 SSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKR 401
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G + + +LI MY KCG VE A+ VF M K I +WN++I G A +GL ++D+
Sbjct: 402 NGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDM 461
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLG 383
F M K V P+ ITF+GV+ +CRH GLV+EG+ +F SM H ++P + HY C+VDLLG
Sbjct: 462 FSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLG 521
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQ 426
RAG L+EA + + +MP+ P+ W A + L+P+ HV
Sbjct: 522 RAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVL 581
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
L+N+YA WD +R +M + PGCS IE V++ F A DK++ + I +
Sbjct: 582 LSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDM 641
Query: 487 LDFLVDQMKTLGYVPEVHEEKVD-DASHKRTEPF 519
L + ++K GY P+++E +D D K + F
Sbjct: 642 LVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLF 675
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 137/330 (41%), Gaps = 93/330 (28%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ GF ++VYV ++LI +S C + DA +VF E V + VSW +I+A + + V+
Sbjct: 105 LKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAK 164
Query: 222 ELYRMM-----------------------------------------------RNSMLEP 234
+Y M +N M E
Sbjct: 165 HIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEE 224
Query: 235 NDFTFT---------------SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
TF S LSAC + G+ H ++++G SYI + N+LI
Sbjct: 225 AIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIY 284
Query: 280 MYCKCGN-------------------------------VEEAVYVFNNMHGKDIVSWNSM 308
MY KCG+ V+ A +F++M KD+VSW+SM
Sbjct: 285 MYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSM 344
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I+GYAQ+ L + LF+EM KPD T + VIS+C +E+GK + ++GL
Sbjct: 345 ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 404
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ + ++D+ + G +E A + M
Sbjct: 405 TINVILGTTLIDMYMKCGCVETALEVFYGM 434
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 15/242 (6%)
Query: 164 TGFIANVYVGSSLITLYSKCRVIIDAY--KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
TGFI Y S LI + I Y ++F + N W +I A+ Q
Sbjct: 4 TGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAF 63
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
LY+ M ++ L +++T+ ++ AC+ + + + H +++GF S + V N+LI+ +
Sbjct: 64 TLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCF 123
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV--KPDAIT 339
C N+ +A VFN D VSWNS++AGY + G A ++ +M ++ + I
Sbjct: 124 SVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIV 183
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA-RDFIKQM 398
G+ GLV E FD M L+ ++ +S ++ + + EEA R F+
Sbjct: 184 LFGM------RGLVVEACKLFDEM----LEKDMVTWSALIACFQQNEMYEEAIRTFVGMH 233
Query: 399 PI 400
I
Sbjct: 234 KI 235
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 135/350 (38%), Positives = 195/350 (55%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+ + +I+ Y + + A +F+ MP R+ VSW AIIA +AQ + + + M+
Sbjct: 311 NIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMK 370
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N TF LSAC AL G+ H Q +R G+ V N+L+ MYCKCG ++
Sbjct: 371 RDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCID 430
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA VF + KDIVSWN+M+AGYA+HG +A+ +FE M+ VKPD IT +GV+S+C
Sbjct: 431 EAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACS 490
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GL + G YF SM K +G+ P HY+C++DLLGRAG LEEA++ I+ MP P+A W
Sbjct: 491 HTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATW 550
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
+AAE +EP + +V L+NLYA W +++R M+
Sbjct: 551 GALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQI 610
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G++ PG SW+E+ N ++ F D + I L+ L +MK GYV
Sbjct: 611 GVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYV 660
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 118/232 (50%), Gaps = 17/232 (7%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++T Y++ R + DA +F+ MP ++VVSW A+++ + + VD +++ + M N
Sbjct: 101 MLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVF----DRMPHKN 156
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++ +L+A SG L + R S N L+ Y K + +A +F+
Sbjct: 157 SISWNGLLAAYVRSGRLEEARRLFESKSDWELIS----CNCLMGGYVKRNMLGDARQLFD 212
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ +D++SWN+MI+GYAQ G +A LFEE + D T+ ++ + G+++E
Sbjct: 213 QIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVR----DVFTWTAMVYAYVQDGMLDE 268
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ FD M + K E+ Y+ ++ + ++ R+ ++MP +PN W
Sbjct: 269 ARRVFDEMPQ---KREMS-YNVMIAGYAQYKRMDMGRELFEEMP-FPNIGSW 315
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 115/223 (51%), Gaps = 8/223 (3%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++I+ Y++ + A ++FEE PVR+V +WTA++ A+ Q+ +D ++ + M +
Sbjct: 223 NTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVF----DEMPQ 278
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ ++ +++ + GR + F I N +IS YC+ G++ +A +
Sbjct: 279 KREMSYNVMIAGYAQYKRMDMGRELFEEMP----FPNIGSWNIMISGYCQNGDLAQARNL 334
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M +D VSW ++IAGYAQ+GL A+++ EM + + TF +S+C +
Sbjct: 335 FDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAAL 394
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
E GK + + G + + +V + + G ++EA D +
Sbjct: 395 ELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQ 437
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++M ++ R+ ++ S A+++C + G +RTG+ VG++L
Sbjct: 360 EEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNAL 419
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC I +AY VF+ + +++VSW ++A +A+ L ++ M + ++P++
Sbjct: 420 VGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDE 479
Query: 237 FTFTSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T +LSAC+ +G +G H G + +I + + G +EEA +
Sbjct: 480 ITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIR 539
Query: 296 NM-HGKDIVSWNSMIAGYAQHG 316
NM D +W +++ HG
Sbjct: 540 NMPFEPDAATWGALLGASRIHG 561
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 99/209 (47%), Gaps = 47/209 (22%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+ MP+RN VS+ A+I+ + + + + +L+ M + L
Sbjct: 55 VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDL------------------- 95
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
FS+ N +++ Y + + +A +F++M KD+VSWN+M++G
Sbjct: 96 ----------------FSW----NLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSG 135
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Y + G A D+F+ M + ++I++ G++++ G +EE + F+S + E
Sbjct: 136 YVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEEARRLFESKSDW----E 187
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
L +C++ + +L +AR Q+P+
Sbjct: 188 LISCNCLMGGYVKRNMLGDARQLFDQIPV 216
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 201/369 (54%), Gaps = 18/369 (4%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G C + GF +N+ V ++L+ +Y+KC + D+ KVFE M R++++W IIA+
Sbjct: 435 GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVH 494
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
++ L + MR + P+ T SIL C+ A QG+ H ++G S + V
Sbjct: 495 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 554
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
N LI MY KCG++ + VF M KD+V+W ++I+ +G +A+ F EM +
Sbjct: 555 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 614
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEAR 392
PD + F+ +I +C H GLVEEG YF M K + ++P ++HY+CVVDLL R+ LL++A
Sbjct: 615 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 674
Query: 393 DFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVR 435
DFI MP+ P++ IW A +E + L P+ +V ++N+YA +
Sbjct: 675 DFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALG 734
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
WDQ +RK +K +GLK +PGCSW+EI N VY F K + E+ +L L M
Sbjct: 735 KWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMA 794
Query: 496 TLGYVPEVH 504
GY+ +
Sbjct: 795 KEGYIANLQ 803
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 170/329 (51%), Gaps = 19/329 (5%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S++ + R RL+ D + + +C + + GF +++Y+G++LI +
Sbjct: 100 LSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDM 159
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y + + A KVFEEMP+R+VVSW ++I+ + + LE+Y RN + P+ +T
Sbjct: 160 YCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTM 219
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S+L AC G G++ +G H ++G + V N L+SMYCK + + +F+ M
Sbjct: 220 SSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVL 279
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D VSWN+MI GY+Q GL +I LF EM+ Q KPD +T ++ +C H G +E GK
Sbjct: 280 RDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYV 338
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPE 419
D M G + + + ++++ + G L +++ M ++V W +
Sbjct: 339 HDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC-KDSVSWNS---------- 387
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMK 448
+ N+Y +D+A ++ K+MK
Sbjct: 388 -------MINVYIQNGSFDEAMKLFKMMK 409
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 141/280 (50%), Gaps = 2/280 (0%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDA 189
+ K D +++ + +CG ++ G I +G+ + + LI +Y+KC ++ +
Sbjct: 311 QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLAS 370
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
+VF M ++ VSW ++I + Q D ++L++MM+ ++P+ T+ +LS T
Sbjct: 371 QEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQL 429
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
G L G+ HC +MGF S I V+N+L+ MY KCG + +++ VF NM +DI++WN++I
Sbjct: 430 GDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTII 489
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
A + + M + V PD T L ++ C +GK + K GL+
Sbjct: 490 ASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLE 549
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ + ++++ + G L + K M + V W A
Sbjct: 550 SDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT-KDVVTWTA 588
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 8/291 (2%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + + H+ R+ L S +S A+ S +T + L I G +V + LI
Sbjct: 2 KTLRVLHECSRQTL---FSSISRALASAATTTQLH---KLHSLIITLGLHHSVIFSAKLI 55
Query: 178 TLYSKCRVIIDAYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
Y+ R ++ VF P NV W +II A L LY + L+P+
Sbjct: 56 AKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDT 115
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+TF S+++AC G +S H + + MGF S + + N+LI MYC+ ++++A VF
Sbjct: 116 YTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEE 175
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D+VSWNS+I+GY +G A++++ V PD+ T V+ +C G VEEG
Sbjct: 176 MPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 235
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + K G+K ++ + ++ + + L + R +M + +AV W
Sbjct: 236 DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM-VLRDAVSW 285
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E + D + + + + C R G + G ++V VG+ LI +YSKC
Sbjct: 508 MRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGS 567
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ ++++VF+ M ++VV+WTA+I+A + + + M + + P+ F +I+ A
Sbjct: 568 LRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFA 627
Query: 246 CTGSGALGQG 255
C+ SG + +G
Sbjct: 628 CSHSGLVEEG 637
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 213/391 (54%), Gaps = 19/391 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA-NVYVGSSLITLYSKCRVIIDA 189
L D + L +++C + ++ G A+R N + +SLI +Y C ++DA
Sbjct: 258 LFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDA 317
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
++FE + ++ VSW ++I +A+ L L+R M P+ TF ++L AC
Sbjct: 318 RRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQI 377
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
AL G S H ++ GF + V +L+ MY KCG++ + VF+ M K +VSW++M+
Sbjct: 378 AALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMV 437
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGL 368
AGY HG AI + + M V PD F ++S+C H GLV EGK F M K + +
Sbjct: 438 AGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNV 497
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AE 411
KP L HYSC+VDLLGRAG L+EA I+ M I P + IW A A+
Sbjct: 498 KPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQ 557
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
+ P+ ++++ L+N+YA + WD RVR +++ KGLK +PGCS+IE+ N+V+RF
Sbjct: 558 KVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFL 617
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
DKS+ + +I L+ L Q+K GY P+
Sbjct: 618 VGDKSHQQTEDIYAKLNELKQQLKEAGYKPD 648
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 6/289 (2%)
Query: 126 LHRERL----KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS 181
L+RE L + D + +CG + G + G +++YVG+SL+ +Y+
Sbjct: 148 LYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYA 207
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
K + A VF+ M R++ SW +I+ +A+ ++ +M + L + T
Sbjct: 208 KFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLG 267
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQ-VANSLISMYCKCGNVEEAVYVFNNMHGK 300
+LSAC A+ +G+ H +R +Y + NSLI MYC C + +A +F + K
Sbjct: 268 LLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWK 327
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D VSWNSMI GYA++G A ++ LF M PD +TF+ V+ +C + G
Sbjct: 328 DTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIH 387
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K G + +VD+ + G L +R +MP + V W A
Sbjct: 388 SYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPD-KSLVSWSA 435
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 101/190 (53%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N Y+ + L Y+ C ++ A +F+ + ++N W +I +A L LYR M
Sbjct: 94 NTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREML 153
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
++FT+ +L AC + GR H + + G S I V NSL++MY K G++
Sbjct: 154 CFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMG 213
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A VF+ M +D+ SWN+MI+GYA++ + A +F+ M K + D T LG++S+C
Sbjct: 214 TARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACA 273
Query: 349 HGGLVEEGKV 358
V+EGKV
Sbjct: 274 DLKAVKEGKV 283
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS-LISMYCKCGNVEEAVYVFNNMHG 299
++L + T + + QG+ H I N+ L + Y CG + +A +F+ +
Sbjct: 64 ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL 123
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K+ WN MI GYA +GL ++++ L+ EM+ + D T+ V+ +C LVE G+
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRV 183
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ GL+ ++ + ++ + + G + AR +M
Sbjct: 184 HSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRM 222
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 242/444 (54%), Gaps = 32/444 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMHHD--------------LHRERLKVDASFLSTAVTSCGSTR 149
VFD++ D VV +I +H + E +K + L +T+C R
Sbjct: 142 VFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARAR 201
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
++ GF +V + + L+ +Y KC + A +F++ +N+ SW +I
Sbjct: 202 DLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMIN 261
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
++ + L L+R M+ ++ + T S+L ACT GAL G+ H +
Sbjct: 262 GHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDV 321
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ + +L+ MY KCG++E A+ VF+ M KD+++W ++I G A G A A+ F+EM
Sbjct: 322 DVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMH 381
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLL 388
+ VKPDAITF+GV+++C H G V+EG +F+SM+ +G++P ++HY +VD+LGRAG +
Sbjct: 382 IKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRI 441
Query: 389 EEARDFIKQMPIYPNAVI-------------WEAAE--SRLLLE--PECAATHVQLANLY 431
EA + IK MP+ P+ + EAAE ++ LLE P + T+V L+N+Y
Sbjct: 442 AEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIY 501
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
+ W++A R R+LM ++G++ PGCS IE+ VV+ F D S+ + SEI +L+ ++
Sbjct: 502 KSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMI 561
Query: 492 DQMKTLGYVPEVHEEKVDDASHKR 515
++K GYVP+ E D A ++
Sbjct: 562 SKLKNAGYVPDKSEVLFDMAEEEK 585
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 138/264 (52%), Gaps = 2/264 (0%)
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
S RN G C + + GF ++ Y ++L+ +YS C ++ A KVF++M + VVSW
Sbjct: 97 SCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWAT 156
Query: 207 IIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
+I AQ Q + + L+ RMM++ ++PN+ T ++L+AC + L + H
Sbjct: 157 MIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEH 216
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
GF ++ + L+ +YCKCG V+ A +F+ K++ SWN MI G+ + A+ LF
Sbjct: 217 GFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLF 276
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
EM + +K D +T ++ +C H G +E GK + K + ++ + +VD+ +
Sbjct: 277 REMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKC 336
Query: 386 GLLEEARDFIKQMPIYPNAVIWEA 409
G +E A +MP + + W A
Sbjct: 337 GSIETAIQVFHEMP-EKDVMTWTA 359
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 162 IRTGFIANVYVGSSLITLYS--KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
+RTG + + S ++ S + + A VF ++P + +II +
Sbjct: 12 LRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQE 71
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L Y+ M L P+ +TF S+ +C S +G+ HC + ++GF S N+L++
Sbjct: 72 ALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDTYAQNTLMN 128
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAI 338
MY CG + A VF+ M K +VSW +MI +AQ A+ LF+ MMK + VKP+ +
Sbjct: 129 MYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEV 188
Query: 339 TFLGVISSC---RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
T + V+++C R +V+ Y D +HG + + ++D+ + G ++ ARD
Sbjct: 189 TLVNVLTACARARDLAMVKRIHEYID---EHGFGRHVVLNTVLMDVYCKCGCVQLARDLF 245
Query: 396 KQ 397
+
Sbjct: 246 DK 247
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 221/406 (54%), Gaps = 19/406 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + I + L D+ + + +CGS + G ++ GF + V +
Sbjct: 443 DANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCN 502
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
SL+T+Y+KC + DA VF ++ N+VSW AI++A Q+ Q LY+ M S +
Sbjct: 503 SLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNK 562
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T T++L C +LG G HC +I+ G + V N LI MY KCG+++ A V
Sbjct: 563 PDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDV 622
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F++ DIVSW+S+I GYAQ GL A++LF M V+P+ +T+LG +S+C H GLV
Sbjct: 623 FDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLV 682
Query: 354 EEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
EEG + SM +HG+ P +H+SC+VDLL RAG L EA FI++ + + W+
Sbjct: 683 EEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLA 742
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A + L L+P +A V L N++A W++ A++RKLMK G++
Sbjct: 743 ACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKV 802
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
PG SWIE+ + + F +ED S+ + + I +L+ L Q+ GY P
Sbjct: 803 PGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDP 848
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E L + L + S ++ V +C + R++ +++ + ++ + + +
Sbjct: 141 EALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHM 200
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y KC + DA KVF+ M + NVVSWT++I+ ++Q Q + + +Y M S P+
Sbjct: 201 INMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQ 260
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF S++ AC +G + GR H I+ F ++ N+LISMY G +E A VF
Sbjct: 261 LTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTR 320
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV-KPDAITFLGVISSCRHGGLVEE 355
+ KD++SW +MI GY Q G V A+ LF ++++Q +P+ F V S+C +E
Sbjct: 321 IPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEY 380
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
GK K GL+ + + D+ + G L A+ Q+ P+ V W A
Sbjct: 381 GKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK-NPDIVSWNA 433
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 158/337 (46%), Gaps = 25/337 (7%)
Query: 82 HLDSQKFNHDFTGTN------STFG----SSNVFDQLLDTPVVDVEKLIS---------- 121
H+ F H T N + FG +SNVF ++ ++ +I+
Sbjct: 285 HVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVE 344
Query: 122 ---MHHDLHRERLKVDASFLSTAV-TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
+ DL R+ F+ +V ++C S + G + ++ G NV+ G SL
Sbjct: 345 ALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLC 404
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
+Y+K + A F ++ ++VSW AIIAAFA + ++ +R M + L P+
Sbjct: 405 DMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSI 464
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T+ S+L C L QGR H +++GF I V NSL++MY KC ++ +A+ VF ++
Sbjct: 465 TYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDI 524
Query: 298 -HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
++VSWN++++ Q L++EM KPD+IT ++ +C + G
Sbjct: 525 SRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVG 584
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
K GL ++ + ++D+ + G L+ ARD
Sbjct: 585 NQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARD 621
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 143/305 (46%), Gaps = 1/305 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I M+ + R D + + +C +I G I++ F ++ ++LI++
Sbjct: 245 IIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISM 304
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFT 238
Y+ I A VF +P ++++SW +I + Q L L+R ++R +PN+F
Sbjct: 305 YTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFI 364
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F S+ SAC+ L G+ H ++ G + SL MY K G + A F +
Sbjct: 365 FGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK 424
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
DIVSWN++IA +A +G A AID F +M+ + PD+IT++ ++ +C + +G+
Sbjct: 425 NPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQ 484
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEP 418
+ K G E+ + ++ + + L +A + + + N V W A S L +
Sbjct: 485 IHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKK 544
Query: 419 ECAAT 423
+ T
Sbjct: 545 QEGET 549
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 206/361 (57%), Gaps = 23/361 (6%)
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
+ + +R+ N ++I+ + ++ A++VF+ MP + VSWTA+I + +
Sbjct: 128 FDAMPVRSAVTYN-----TVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 182
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
D + +R M +EP+ T +++SAC GALG G H +R G +++ANS
Sbjct: 183 HDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANS 242
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI MY +CG VE A VF+ M + +VSWNSMI G+A +G A++ FE M ++ KPD
Sbjct: 243 LIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPD 302
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
A+TF GV+++C HGGL +EG Y+D M A++G+ ++HY CVVDLLGR+G LEEA +
Sbjct: 303 AVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEAMRVV 362
Query: 396 KQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWD 438
MP+ PN V+ A + L L+P A +V L+N+YA V WD
Sbjct: 363 TTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWD 422
Query: 439 QAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
A +VR LMK +GL+ PG S +EI V+ F + D+S+ + EI +L L+ +M
Sbjct: 423 GAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLLMHEMAGHD 482
Query: 499 Y 499
Y
Sbjct: 483 Y 483
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 6/205 (2%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L +++C + G L +R G NV + +SLI +Y++C + A +VF
Sbjct: 201 DYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVF 260
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
M R VVSW ++I FA + +E + MR +P+ TFT +L+AC+ G
Sbjct: 261 SGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTD 320
Query: 254 QG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAG 311
+G R G + ++ ++ + + G +EEA+ V M + + V +++AG
Sbjct: 321 EGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEAMRVVTTMPMRPNEVVLGALLAG 380
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPD 336
HG + + E++M+ ++ D
Sbjct: 381 CRMHG----DVGMAEQLMQHLLELD 401
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 38/236 (16%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRN--SMLEPNDFTFTSILSACTGSGALGQGR- 256
+V SWT+ IA A++ + M + + PND T ++LSAC S + R
Sbjct: 29 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLARR 88
Query: 257 ---SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
S H + +++ F S++ ++ L+ Y A+ +F+ M + V++N++I+G
Sbjct: 89 LALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLM 147
Query: 314 QHGLAV-------------------------------RAIDLFEEMMKQRVKPDAITFLG 342
++GL AI+ F M+ V+PD +T +
Sbjct: 148 RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLLDGVEPDYVTLIA 207
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
VIS+C G + G + + GL+ + + ++D+ R G +E AR M
Sbjct: 208 VISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFSGM 263
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 241/445 (54%), Gaps = 31/445 (6%)
Query: 79 DSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFL 138
D++ Q F D NS + ++Q D PV + M + + L S
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAA---YEQN-DDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 139 STAVTS--CGSTRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEE 195
S S C ++R++ G +R G++ +V +G++++ +Y+K ++ A+KVFE
Sbjct: 425 SIVAQSRDCKNSRSVHG------FIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEI 478
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACTGSGALGQ 254
+ V++V+SW +I +AQ +E+Y+MM + PN T+ SIL A GAL Q
Sbjct: 479 ILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQ 538
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G H + I+ + VA LI +Y KCG + +A+ +F + + V+WN++I+ +
Sbjct: 539 GMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGI 598
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
HG A + + LF EM+ + VKPD +TF+ ++S+C H G VEEGK F M ++G+KP L H
Sbjct: 599 HGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKH 658
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----------------AESRLL-LE 417
Y C+VDLLGRAG LE A FIK MP+ P+A IW A A RL ++
Sbjct: 659 YGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 718
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
+ +V L+N+YA V W+ +VR L +++GLK PG S IE+ V F ++S+
Sbjct: 719 SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSH 778
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPE 502
+ EI L L +MK+LGY+P+
Sbjct: 779 PKCKEIYEELRVLTAKMKSLGYIPD 803
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 151/287 (52%), Gaps = 3/287 (1%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ E +K++ + + + C +I I+ G +++V ++LI +Y+K
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFG 365
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA K F++M + +VVSW +IIAA+ Q + M+ + +P+ T S+ S
Sbjct: 366 NLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLAS 425
Query: 245 ACTGSGALGQGRSAHCQTIRMGFF-SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
S RS H +R G+ + + N+++ MY K G ++ A VF + KD++
Sbjct: 426 IVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVI 485
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
SWN++I GYAQ+GLA AI++++ M + + + P+ T++ ++ + H G +++G
Sbjct: 486 SWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGR 545
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K L ++ +C++D+ G+ G L +A Q+P ++V W A
Sbjct: 546 VIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNA 591
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 138/253 (54%), Gaps = 5/253 (1%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
L + G + ++++ + L+ LY+ + + F+++P ++V +W ++I+A+
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHF 198
Query: 218 DMCLE-LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
+ Y+++ S + P+ +TF +L AC G L GR HC ++GF + VA S
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAAS 255
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI MY + G A +F++M +D+ SWN+MI+G Q+G A +A+D+ +EM + +K +
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+T + ++ C G + + + KHGL+ +L + ++++ + G LE+AR +
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375
Query: 397 QMPIYPNAVIWEA 409
QM I + V W +
Sbjct: 376 QMFI-TDVVSWNS 387
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 160/352 (45%), Gaps = 42/352 (11%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D + +CG+ + G C A + GF NV+V +SLI +YS+ A
Sbjct: 214 IRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIAR 270
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F++MP R++ SW A+I+ Q L++ MR ++ N T SIL C G
Sbjct: 271 SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLG 330
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ H I+ G + V+N+LI+MY K GN+E+A F M D+VSWNS+IA
Sbjct: 331 DISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIA 390
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG--- 367
Y Q+ V A F +M +PD +T + + S +V + + +S + HG
Sbjct: 391 AYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLAS------IVAQSRDCKNSRSVHGFIM 444
Query: 368 ----LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------------EA 409
L ++ + VVD+ + GLL+ A + ++ + + + W EA
Sbjct: 445 RRGWLMEDVVIGNAVVDMYAKLGLLDSAHK-VFEIILVKDVISWNTLITGYAQNGLASEA 503
Query: 410 AESRLLLEPECA------ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
E ++E EC T V + YA V Q R+ + +KTN
Sbjct: 504 IEVYKMME-ECKEIIPNQGTWVSILPAYAHVGALQQGMRIH----GRVIKTN 550
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 22/198 (11%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + G I ++ L+++Y G+V + F+ + KD+ +WNSMI+ Y +G
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHF 198
Query: 319 VRAIDLFEE-MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
AI F + ++ ++PD TF V+ +C G LV+ +++ + K G + + +
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKAC--GTLVDGRRIHCWAF-KLGFQWNVFVAAS 255
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCW 437
++ + R G AR MP + + W A S L+ A
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMP-FRDMGSWNAMISGLIQNGNAA---------------- 298
Query: 438 DQAARVRKLMKDKGLKTN 455
QA V M+ +G+K N
Sbjct: 299 -QALDVLDEMRLEGIKMN 315
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 212/369 (57%), Gaps = 21/369 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ G + + + +SL+ Y+ A K+F+EMPVR+ V+W +I +A+ + L
Sbjct: 162 VAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDAL 221
Query: 222 ELYRMMR--NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+L+ MR +S EP+D T +L AC+ GAL G G+ ++V NSLI+
Sbjct: 222 KLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLIT 281
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY +CG V++A VF+ K +V+W +MI+G A +G AI +FEEM++ V PD T
Sbjct: 282 MYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQT 341
Query: 340 FLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFI-KQ 397
F GV+S+C H GLV+EG +FD M ++GLKP + HY C+VDL+GRAGLL+EA +F+ +
Sbjct: 342 FTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNE 401
Query: 398 MPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQA 440
M + P+A IW E L+ L+ + A +V L N YA V W +
Sbjct: 402 MKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKV 461
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
+ +RKLM+++G++T PGC+ +E V+ F A+D ++ R EI L + Q++ GYV
Sbjct: 462 SEIRKLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYV 521
Query: 501 PEVHEEKVD 509
P V E D
Sbjct: 522 PNVSSELHD 530
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N FT +L +L R H + G +A SL+ Y G+ + A +F
Sbjct: 137 NAFTLAILLKP---RCSLAHARQLHANVVAEGHLRDALLATSLMRCYANRGDGDGARKLF 193
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGGL 352
+ M +D V+WN +I YA++ A+ LFEEM + +PD +T + ++ +C G
Sbjct: 194 DEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGA 253
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
++ G+ + +HG EL + ++ + R G +++A P + V W A S
Sbjct: 254 LDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTP-QKSVVTWTAMIS 312
Query: 413 RL 414
L
Sbjct: 313 GL 314
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 206/360 (57%), Gaps = 18/360 (5%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G L +R F ++V V S+LI +Y+K IIDA +VF+EM +RNVV+W +I F
Sbjct: 289 GKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGN 348
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ ++L + M P++ T +SI+S+C + A+ + H +++ ++ V
Sbjct: 349 HGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSV 408
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
ANSLIS Y KCG++ A F D+V+W S+I YA HGLA ++ ++FE+M+ +
Sbjct: 409 ANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGI 468
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEAR 392
KPD I FLGV+S+C H GLV +G YF M + + P+ +HY+C+VDLLGR GL+ EA
Sbjct: 469 KPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAF 528
Query: 393 DFIKQMPI----------------YPNAVIWE-AAESRLLLEPECAATHVQLANLYAGVR 435
+ ++ MPI + N + + AAE L+EPE + + ++N++A +
Sbjct: 529 EILRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQK 588
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W R+RK M+DK PGCSWIEI N ++ F + DKS+ E+ L+ L+ MK
Sbjct: 589 HWYDVERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSHPNALEMYVTLNMLLRPMK 648
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 9/279 (3%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
F S A+ + G I+ GF + + + ++++Y KC+ DA K+FEE+
Sbjct: 62 FCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEEL 121
Query: 197 PVRNVVSWTAIIAAFA------QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
PVRNVVSW +I A + + +C +R M M+ P+ TF ++ CT
Sbjct: 122 PVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFN 181
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ G HC T+++GF V +L+ +Y KCG VE A VF ++ +D+V WN M++
Sbjct: 182 DIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVS 241
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL--VEEGKVYFDSMAKHGL 368
Y + L A +F M V D TF ++S L + GK + +
Sbjct: 242 CYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSF 301
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ S ++++ ++ + +AR +M I N V W
Sbjct: 302 DSDVLVASALINMYAKSENIIDARRVFDEMSI-RNVVAW 339
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 17/242 (7%)
Query: 28 YRSFCSQKLKQISSSK-SLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQ 86
+R F S +L ++ + + L V+ + D K L L Q F DS L +
Sbjct: 253 FRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSF---DSDVLVAS 309
Query: 87 KFNHDFTGTNSTFGSSNVFDQLLDTPVV-------------DVEKLISMHHDLHRERLKV 133
+ + + + + VFD++ VV D +++ + ++ RE
Sbjct: 310 ALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLP 369
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D +S+ ++SCG I A++ + V +SLI+ YSKC I A+K F
Sbjct: 370 DELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCF 429
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
E ++V+WT++I A+A + E++ M + ++P+ F +LSAC G +
Sbjct: 430 ELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVT 489
Query: 254 QG 255
+G
Sbjct: 490 KG 491
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/434 (33%), Positives = 238/434 (54%), Gaps = 54/434 (12%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK------CR 184
++ DA +++ +++C + R ++ G +RTG + + ++LI+ Y+K R
Sbjct: 476 MEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETAR 535
Query: 185 VIID---------------------------AYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
I+D A ++F+ M R+V++WTA+I + Q Q
Sbjct: 536 RIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQN 595
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
D +EL+R M EPN T ++LSAC L G+ HC+ IR + V+N++
Sbjct: 596 DEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAI 655
Query: 278 ISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
I++Y + G+V A VF+ + K+ ++W SMI AQHGL +A+ LFEEM++ VKPD
Sbjct: 656 ITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPD 715
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
IT++GV+S+C H G V++GK Y++ M +HG+ P++ HY+C+VDL RAGLL EA +FI
Sbjct: 716 HITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFI 775
Query: 396 KQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWD 438
++MP+ P+ V+W E A +LL ++P + + LAN+Y+ W+
Sbjct: 776 QRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWN 835
Query: 439 QAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
AAR+ KL KDKG+K G SW + V+ F A+D + + I + +++K G
Sbjct: 836 DAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAG 895
Query: 499 YVPEVHE--EKVDD 510
+VP+++ VDD
Sbjct: 896 FVPDLNSVLHDVDD 909
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 130/261 (49%), Gaps = 32/261 (12%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N + +SL++LY+K + DA+ VF EMP R+ VSWT +I + + ++ + M
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ P+ FT T++LS+C A G GR H +++G S + VANS++ MY KCG+ E
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399
Query: 289 E-------------------------------AVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
AV +F NM + IVSWN++IAGY Q+GL
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459
Query: 318 AVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
A+ F M+ ++PDA T V+S+C + +++ GK + + G+ +
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519
Query: 377 CVVDLLGRAGLLEEARDFIKQ 397
++ ++G +E AR + Q
Sbjct: 520 ALISTYAKSGSVETARRIMDQ 540
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 139/335 (41%), Gaps = 65/335 (19%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ ++SC + G ++ G + V V +S++ +Y KC A VFE M
Sbjct: 350 LTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQ 409
Query: 198 VRNV-------------------------------VSWTAIIAAFAQEWQVDMCLELY-R 225
VR+V VSW IIA + Q M L+ + R
Sbjct: 410 VRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSR 469
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ S +EP+ FT TS+LSAC L G+ H +R G Q+ N+LIS Y K G
Sbjct: 470 MLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSG 529
Query: 286 NVE---------------------------------EAVYVFNNMHGKDIVSWNSMIAGY 312
+VE +A +F+ M+ +D+++W +MI GY
Sbjct: 530 SVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGY 589
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+G A++LF M+ +P++ T V+S+C ++ GK + + +
Sbjct: 590 HQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSV 649
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ ++ + R+G + AR Q+ + W
Sbjct: 650 SVSNAIITVYARSGSVPLARRVFDQICWRKETITW 684
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
NSL+S+Y K G + +A VF M +D VSW MI G + G A+ F +M+ +
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
P T V+SSC G+ + K GL + + V+ + G+ G E AR
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAV 404
Query: 395 IKQMPI 400
++M +
Sbjct: 405 FERMQV 410
>gi|297735121|emb|CBI17483.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 221/409 (54%), Gaps = 32/409 (7%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R R++ D+ + A+ +C + + G A++ GF + +V ++L T+Y+KC
Sbjct: 214 EMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCG 273
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ +FE+M +R+VVSWT II Q Q + ++ + MR S + PN++TF +++S
Sbjct: 274 KLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVIS 333
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
C + G H + +G + + V NS+++MY KCG + + +F+ M +DIVS
Sbjct: 334 GCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVS 393
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK---VYFD 361
W+++IAGY+Q G A +L M + KP V+S+C + ++E GK Y
Sbjct: 394 WSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVL 453
Query: 362 SMA------KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
S+ K+ + P +HY C++DLL RAG L +A I+ MP + + V+W
Sbjct: 454 SIGLEHTAMKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACR 513
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AE L LEP CA TH+ LAN+YA W +AA +RKLMK KG+ PG
Sbjct: 514 VHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGW 573
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDF------LVDQMKTLGYVP 501
SWI++ ++V+ F A D+S+ + +I +LD L D ++ G++P
Sbjct: 574 SWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLP 622
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 138/268 (51%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L++D LS A +CG ++ G A++TG + +V+VGS+L+ +Y+K I +
Sbjct: 119 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 178
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+VF EMP+RNVVSWTAII + L + M S +E + +TF L AC SG
Sbjct: 179 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 238
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL GR H Q ++ GF VAN+L +MY KCG +E + +F M +D+VSW ++I
Sbjct: 239 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 298
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
Q G A+ F M + V P+ TF VIS C + +E G+ + GL
Sbjct: 299 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 358
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L + ++ + + G L + +M
Sbjct: 359 SLSVENSIMTMYAKCGQLTSSSVIFHEM 386
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 110/237 (46%), Gaps = 4/237 (1%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-NSMLEPNDFTFTSILSAC 246
+A ++F++M ++ +SWT +I+ + L L++ MR S L + F + AC
Sbjct: 74 NARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKAC 133
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ + G H ++ G + + V ++L+ MY K G + E VF+ M +++VSW
Sbjct: 134 GLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWT 193
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
++I G + G A+ F EM + RV+ D+ TF + +C G + G+ K
Sbjct: 194 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 253
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL--LLEPECA 421
G + + + + G LE ++M + + V W + L + + ECA
Sbjct: 254 GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM-RDVVSWTTIITTLVQMGQEECA 309
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQR 332
+N + K G++ A +F+ M KD +SW ++I+GY + A+ LF+ M ++
Sbjct: 59 SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 118
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
++ D +C V G++ K GL + S ++D+ + G + E R
Sbjct: 119 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 178
Query: 393 DFIKQMPIYPNAVIWEA 409
+MP+ N V W A
Sbjct: 179 RVFHEMPM-RNVVSWTA 194
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 221/376 (58%), Gaps = 20/376 (5%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC--RVIIDAYKVFEEMPVR 199
+++C + + G + L I+ G +V + ++LIT+Y K + + A +F M +
Sbjct: 312 ISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSK 371
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+ VSW +I+ F+Q + L+L+ MR+S+ E +D+ ++++L +C+ L G+ H
Sbjct: 372 DRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIH 431
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
T++ GF S VA+SLI MY KCG +E+A F + + ++WNS++ YAQHG
Sbjct: 432 LLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGD 491
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCV 378
A+DLF M ++ VK D +TF+ V+++C H GLVE+G+ SM + +G+ P ++HY+C
Sbjct: 492 VALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACA 551
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECA 421
VDL GRAG LEEA+ I MP PNA++ + A L +EPE
Sbjct: 552 VDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEH 611
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
T+V L+N+Y ++ WD A V +LM+++ +K PG SWIE+ N V+ F+AED+S+
Sbjct: 612 CTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHPYSE 671
Query: 482 EILPVLDFLVDQMKTL 497
++ +L L+++MK L
Sbjct: 672 DVYQILGELMEEMKRL 687
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G L ++ G+ +VY GS+L+ +Y+KC + DAY VF+ MPVRN VSW A+I F Q
Sbjct: 121 GQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQ 180
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
D L M+ + D TF +L+ G HC+ I+ G Y +
Sbjct: 181 VGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNAL 240
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
N+ ++ Y +CG +E+A VF+ G +D+V+WNSM+ Y H A +LF EM
Sbjct: 241 CNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFG 300
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+PD T+ VIS+C GK + + K GL+
Sbjct: 301 FEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLE 337
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 147/293 (50%), Gaps = 7/293 (2%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ +E ++V+ + +T + + C I+ G + ++ +T YS+C +
Sbjct: 194 MQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGL 253
Query: 186 IIDAYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA +VF+ + R++V+W +++ A+ + + L+ M+ EP+ +T+T ++S
Sbjct: 254 LEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVIS 313
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN--VEEAVYVFNNMHGKDI 302
AC + G+S H I+ G + + N+LI+MY K N +E A+ +F++M KD
Sbjct: 314 ACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDR 373
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
VSWNS++ G++Q G + A+ LF M + D + V+ SC +++ G+
Sbjct: 374 VSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLL 433
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEA----RDFIKQMPIYPNAVIWEAAE 411
K G S ++ + + G++E+A D K+ I N++++ A+
Sbjct: 434 TVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQ 486
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 14/260 (5%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRV--IIDAYKVFEEMPVRNVVSWTAIIAAFAQEW 215
C A ++G I+++YV ++++ YSKC + A K+F+EMP ++ V+W +I + +
Sbjct: 22 HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
+ E + M+ + + +TF SIL + G+ H +++G+ + +
Sbjct: 82 NLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGS 141
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
+L+ MY KC VE+A VF M ++ VSWN++I G+ Q G A L + M K+ V+
Sbjct: 142 ALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRV 201
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMA------KHGLKPELDHYSCVVDLLGRAGLLE 389
+ TF +++ L++ K Y +M KHGL+ + + GLLE
Sbjct: 202 EDGTFAPLLT------LLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLE 255
Query: 390 EARDFIKQMPIYPNAVIWEA 409
+A+ + V W +
Sbjct: 256 DAKRVFDGAVGTRDLVTWNS 275
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 213/399 (53%), Gaps = 49/399 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
V SC G + G +N V +SL+ +Y KC + DA++VFEEM R+
Sbjct: 124 VKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDA 183
Query: 202 VSW-------------------------------TAIIAAFAQEWQVDMCLELYRMMRNS 230
VSW TAI++ +A+ LE +R M+
Sbjct: 184 VSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMV 243
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+EP++ + S+L C GAL G+ H + GF I V N+LI MY KCG++++
Sbjct: 244 GIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQG 303
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F+ M +D++SW++MI G A HG A AI+LF+EM K +++P ITF+G++++C H
Sbjct: 304 RRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHA 363
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE- 408
GL+ EG YF+SM + + ++P ++HY C+V+LLG +G L++A + +K+MP P++ IW
Sbjct: 364 GLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGS 423
Query: 409 ----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
A E L LEP +V L+NLYA + WD +R+RKLM+ K +
Sbjct: 424 LLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSM 483
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
K PGCS IE+ N+V F + D S I VL LV
Sbjct: 484 KKTPGCSSIEVDNMVQEFASGDDSKPFSKAICRVLKLLV 522
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 36/243 (14%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLE----PNDFTFTSILSAC 246
+F+ + N + A+I A+ + + +Y+ M+ N E P+ FTF ++ +C
Sbjct: 68 LFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSC 127
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G G+ H + G S V NSL+ MY KC ++++A VF M +D VSWN
Sbjct: 128 AGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWN 187
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQR-------------------------------VKP 335
++I+G+ + G RA +FEEM + ++P
Sbjct: 188 TLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEP 247
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
D I+ + V+ C G +E GK K G + + ++++ + G +++ R
Sbjct: 248 DEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLF 307
Query: 396 KQM 398
QM
Sbjct: 308 DQM 310
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 5/203 (2%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D L + + C + G A + GF+ N+ V ++LI +Y+KC I
Sbjct: 245 IEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGR 304
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
++F++M R+V+SW+ +I A + +EL++ M+ + +EP+ TF +L+AC +G
Sbjct: 305 RLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAG 364
Query: 251 ALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSM 308
L +G R ++ L+++ G +++A+ + M K D W S+
Sbjct: 365 LLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSL 424
Query: 309 IAGYAQHG---LAVRAIDLFEEM 328
++ HG +AV A++ E+
Sbjct: 425 LSSCRSHGNLKIAVIAMEHLLEL 447
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/350 (38%), Positives = 197/350 (56%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+ +++IT Y + I A K+F+ MP R+ VSW AII+ +AQ + L ++ M+
Sbjct: 324 NISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMK 383
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N TF+ LS C AL G+ H Q ++ GF + V N+L+ MY KCG+ +
Sbjct: 384 RDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTD 443
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA VF + KD+VSWN+MIAGYA+HG +A+ LFE M K VKPD IT +GV+S+C
Sbjct: 444 EANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACS 503
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GL++ G YF SM + + +KP HY+C++DLLGRAG LEEA + ++ MP P A W
Sbjct: 504 HSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASW 563
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
+AAE +EP+ + +V L+NLYA W ++R M++
Sbjct: 564 GALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREA 623
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G++ G SW+E+ N ++ F D + I L+ L +M+ GYV
Sbjct: 624 GVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYV 673
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 21/228 (9%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++M ++ R+ + S S A+++C + G ++ GF +VG++L
Sbjct: 373 EEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNAL 432
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC +A VFE + ++VVSW +IA +A+ L L+ M+ + ++P++
Sbjct: 433 LGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDE 492
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN---------SLISMYCKCGNV 287
T +LSAC+ SG + +G F+S + N +I + + G +
Sbjct: 493 ITMVGVLSACSHSGLIDRGTEY--------FYSMDRDYNVKPTSKHYTCMIDLLGRAGRL 544
Query: 288 EEAVYVFNNM-HGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQ 331
EEA + NM SW +++ HG L +A ++ +M Q
Sbjct: 545 EEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ 592
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 126/262 (48%), Gaps = 42/262 (16%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
++T Y + R + +A+K+F+ MP ++VVSW A+++ +AQ VD E++ N M N
Sbjct: 114 MLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVF----NKMPHRN 169
Query: 236 DFTFTSILSACTGSGALGQGR------------------SAHCQTIRMG----FFSYIQV 273
++ +L+A +G L + R + + +G F + V
Sbjct: 170 SISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPV 229
Query: 274 A-----NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
N++IS Y + G++ +A +FN +D+ +W +M++GY Q+G+ A F+EM
Sbjct: 230 RDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEM 289
Query: 329 -MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
+K + +A+ + ++ +V G++ F++M + ++ ++ G+ G
Sbjct: 290 PVKNEISYNAM----LAGYVQYKKMVIAGEL-FEAMPCRNISS----WNTMITGYGQNGG 340
Query: 388 LEEARDFIKQMPIYPNAVIWEA 409
+ +AR MP + V W A
Sbjct: 341 IAQARKLFDMMP-QRDCVSWAA 361
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 43/241 (17%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF MP R+ VS+ A+I+ + + + + +L+ + M E + F++ +L+
Sbjct: 65 ALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLF----DKMPERDLFSWNVMLTGYVR 120
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ LG+ + S+ N+++S Y + G V+EA VFN M ++ +SWN +
Sbjct: 121 NRRLGEAHKLFDLMPKKDVVSW----NAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGL 176
Query: 309 IAGYAQHGLAVRAIDLFEE-----------MMKQRVK----------------PDAITFL 341
+A Y +G A LFE +M VK D I++
Sbjct: 177 LAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWN 236
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG--RAGLLEEARDFIKQMP 399
+IS G + + K F+ P D ++ + G + G+++EAR + +MP
Sbjct: 237 TMISGYAQVGDLSQAKRLFNE------SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMP 290
Query: 400 I 400
+
Sbjct: 291 V 291
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
I N IS + + G+ + A+ VFN+M + VS+N+MI+GY ++ A DLF++M +
Sbjct: 46 IVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPE 105
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+ + + G + + R G E FD M K ++ ++ ++ + G ++E
Sbjct: 106 RDLFSWNVMLTGYVRNRRLG----EAHKLFDLMP----KKDVVSWNAMLSGYAQNGFVDE 157
Query: 391 ARDFIKQMPIYPNAVIWEA 409
AR+ +MP + N++ W
Sbjct: 158 AREVFNKMP-HRNSISWNG 175
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 211/386 (54%), Gaps = 20/386 (5%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E +K D ++ + SCG + G L IR F +V V S+L+ +YSK I D
Sbjct: 273 EGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIED 332
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A K F+ M V+N+VSWT + + Q + L + M P++ SILS+C
Sbjct: 333 ARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDELALASILSSCGN 392
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A + H + GF +++ +AN+L+S Y KCG++ A F+++ DI+SW S+
Sbjct: 393 LSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSL 452
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HG 367
+ YA HGL+ + +D+FE+++ V+PD + FLGV+S+C HGG V EG YF+ M +
Sbjct: 453 MGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQ 512
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA------------------VIWEA 409
+ P+ +HY+ ++DLLGRAG L+EA + + MP+ P + W A
Sbjct: 513 IMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAFLGACKVYRNVGLARW-A 571
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
+E ++EP + ++N+YA V W ARVRKLM+++ PGCSW+E V+
Sbjct: 572 SEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMETAGEVHT 631
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMK 495
F + DK++ R ++ +LD LV MK
Sbjct: 632 FVSRDKTHPRAVQVYGMLDLLVRLMK 657
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 120/219 (54%), Gaps = 11/219 (5%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C +++GF +N +VGS+L+ Y+K ++ +A F+E+ R++V W +++ +A
Sbjct: 201 HCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQ 260
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
++++MR ++ + FTFTS++++C G+ G G+ H IR+ F + VA++L
Sbjct: 261 GKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASAL 320
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ MY K N+E+A F+ M K+IVSW +M GY QHG + L +EM++ PD
Sbjct: 321 VDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDE 380
Query: 338 ITFLGVISSCR-----------HGGLVEEGKVYFDSMAK 365
+ ++SSC H +VE G F S+A
Sbjct: 381 LALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIAN 419
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 131/276 (47%), Gaps = 5/276 (1%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
SF S A+ + GG I+ G + + + ++ +Y KC+ D K+F+E
Sbjct: 74 SFSSHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDE 133
Query: 196 MPVRNVVSWTAIIAAFAQE----WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
MP++NVVSW +I + V + +R M M+ PN T +L A
Sbjct: 134 MPLKNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELND 193
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+G R HC ++ GF S V ++L+ Y K G V+EA F+ + +D+V WN M++
Sbjct: 194 VGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSC 253
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
YA +G+ +A +F+ M + VK D TF +I+SC G GK + + +
Sbjct: 254 YALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLD 313
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ S +VD+ + +E+AR M J N V W
Sbjct: 314 VLVASALVDMYSKNENIEDARKAFDGM-JVKNIVSW 348
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 210/359 (58%), Gaps = 19/359 (5%)
Query: 164 TGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLEL 223
G VGS+L+ +Y KC + +A +VF+ + ++ V+W A+I +AQ + L
Sbjct: 262 VGMEVGSLVGSALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISL 321
Query: 224 YRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
+ MR + P+ T +LSAC GAL G ++ GF+S + V +L+ MY K
Sbjct: 322 FHSMRQAGARPDKITLVGVLSACAAVGALELGTELDRYALQRGFYSNVYVGTALVDMYSK 381
Query: 284 CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLG 342
CG++ A+ VF + K+ SWN++I G A +G AI FE M KQ ++PD ITF+G
Sbjct: 382 CGDLTRAIQVFEKLPCKNEASWNALICGLAFNGRGQEAIRQFELMRKQEGLRPDDITFIG 441
Query: 343 VISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V+S+C H GL+++G+ +FDS+ ++ + P+++HYSC+VDLL RAG LEEA DFI+++P
Sbjct: 442 VLSACVHAGLLKDGRRWFDSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFIEKIPGK 501
Query: 402 PNAVIWEA--AESR---------------LLLEPECAATHVQLANLYAGVRCWDQAARVR 444
P+AV+ A A R +LLEP + +V + +YA D +AR+R
Sbjct: 502 PDAVMLGALLAACRKCKNVEVSVRVINKIMLLEPSNSWNYVVSSKIYASSDRLDDSARMR 561
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
LM+++G+ PGCSWIE+ V F A D+ + ++ +LD LVD+M+ GYVP +
Sbjct: 562 GLMRERGVSKIPGCSWIEVSGRVLEFYAGDEPQHGVEDMYQLLDTLVDEMRLEGYVPNL 620
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 121/236 (51%), Gaps = 2/236 (0%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLE 233
SL+T+YS A +VF+ + R+VVSW ++I A+ D ++R M+ +
Sbjct: 171 SLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFRAMVAEGAVP 230
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN T +L+AC +G L GR +G V ++L+ MY KCG + EA V
Sbjct: 231 PNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGSALVGMYEKCGEMAEARRV 290
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ + KD V+WN++I GYAQ+G++ AI LF M + +PD IT +GV+S+C G +
Sbjct: 291 FDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAGARPDKITLVGVLSACAAVGAL 350
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
E G + G + + +VD+ + G L A +++P N W A
Sbjct: 351 ELGTELDRYALQRGFYSNVYVGTALVDMYSKCGDLTRAIQVFEKLPC-KNEASWNA 405
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ IS+ H + + + D L +++C + + G A++ GF +NVYVG++L
Sbjct: 316 KEAISLFHSMRQAGARPDKITLVGVLSACAAVGALELGTELDRYALQRGFYSNVYVGTAL 375
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-NSMLEPN 235
+ +YSKC + A +VFE++P +N SW A+I A + + + +MR L P+
Sbjct: 376 VDMYSKCGDLTRAIQVFEKLPCKNEASWNALICGLAFNGRGQEAIRQFELMRKQEGLRPD 435
Query: 236 DFTFTSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
D TF +LSAC +G L GR T I+ + ++ + + G++EEA
Sbjct: 436 DITFIGVLSACVHAGLLKDGRRWFDSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFI 495
Query: 295 NNMHGK-DIVSWNSMIAG 311
+ GK D V +++A
Sbjct: 496 EKIPGKPDAVMLGALLAA 513
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L+L M + L P+ +T +L A A SAH ++G ++ +SL++M
Sbjct: 116 LQLSLRMLRAALRPDAYTLPFLLLAAARCPAPAFAASAHALLQKLGLHNHDHTVHSLVTM 175
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAIT 339
Y G A VF+ + +D+VSWNSMI Y G+ A +F M+ + V P+A+T
Sbjct: 176 YSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFRAMVAEGAVPPNAVT 235
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
V+++CR G + G+ + + G++ S +V + + G + EAR +
Sbjct: 236 VAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGSALVGMYEKCGEMAEARRVFDAI- 294
Query: 400 IYPNAVIWEA 409
+ + V W A
Sbjct: 295 AHKDNVAWNA 304
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 202/359 (56%), Gaps = 20/359 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
+ + L+ +YSK + A +VFE M R+VVSWT++IA +A+E DM + L+ M
Sbjct: 261 LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKED 320
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
L PN T IL AC AL +G+ H +R GF VAN+L+ MY KCG + A
Sbjct: 321 LFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLAR 380
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F+ + KD+VSW MIAGY HG AI F EM ++PD ++F+ ++ +C H G
Sbjct: 381 LLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSG 440
Query: 352 LVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA- 409
L++EG +F+ M + ++P+ +HY+C+VDLL RAG L +A FIK MPI P+A IW A
Sbjct: 441 LLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 500
Query: 410 ----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
AE LEPE +V LAN+YA W++ ++R+ + +GL+
Sbjct: 501 LCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLR 560
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEE--KVDD 510
NPGCSWIEI V+ F D S+ ++I +L +MK G+ P++ K DD
Sbjct: 561 KNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADD 619
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 127/277 (45%), Gaps = 22/277 (7%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C ++I+ G + + +GS L+ +Y C + + ++F+++ V W
Sbjct: 111 CADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLW 170
Query: 205 TAIIAAFAQEWQVDMCLELYRMMR--------------NSMLEPNDFTFTSILSACTGSG 250
++ +A+ L L++ MR + + + + ++ S++S +G
Sbjct: 171 NLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNG 230
Query: 251 ALGQGRSAHCQTIRMGFFS--------YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
+G Q + +G + + + N L+ MY K GN+ A+ VF M + +
Sbjct: 231 LSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSV 290
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
VSW SMIAGYA+ GL+ ++ LF EM K+ + P++IT ++ +C +E G+
Sbjct: 291 VSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGH 350
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ ++G + + +VD+ + G L AR +P
Sbjct: 351 ILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP 387
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + H++ +E L ++ ++ + +C S + G +R GF + +V ++L+ +
Sbjct: 310 VRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDM 369
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + A +F+ +P +++VSWT +IA + + + MRNS +EP++ +F
Sbjct: 370 YLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSF 429
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYI----------QVANSLISMYCKCGNVEE 289
SIL AC+ SG L +G GFF+ + + ++ + + GN+ +
Sbjct: 430 ISILYACSHSGLLDEG---------WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSK 480
Query: 290 AVYVFNNMHG--KDIVSWNSMIAG 311
A Y F M D W +++ G
Sbjct: 481 A-YKFIKMMPIEPDATIWGALLCG 503
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 49/155 (31%)
Query: 238 TFTSILSACTGSGALGQGRSAH------------------------CQTIRMGFFSYIQV 273
T+ S+L C ++ GR H C +R G + +V
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 274 ANS-------LISMYCKCGN------------------VEEAVYVFNNMHGKDIVSWNSM 308
AN L++ Y K GN VE A +F+ + +D++SWNSM
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
I+GY +GL+ + +DLFE+M+ + D T + V
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV 257
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 220/397 (55%), Gaps = 34/397 (8%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV---------YVGSSLITLYSKCRVIID 188
L + ++ C S + G C AI+ +I N+ V ++LI +YSKC+
Sbjct: 389 LVSLLSGCASAGTLLHGKETHCHAIK--WILNLDENDPGDDLMVINALIDMYSKCKSPKA 446
Query: 189 AYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSMLEPNDFTFTSILS 244
A +F+ +P R+VV+WT +I AQ + + LEL+ M ++ + PN FT + L
Sbjct: 447 ARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALM 506
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
AC GAL GR H +R F S + VAN LI MY K G+V+ A VF+NMH ++ V
Sbjct: 507 ACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGV 566
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SW S++ GY HG A+ +F EM K + PD +TF+ V+ +C H G+V++G YF+ M
Sbjct: 567 SWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGM 626
Query: 364 AK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------------- 407
K G+ P +HY+C+VDLL RAG L+EA + I+ MP+ P +W
Sbjct: 627 NKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVEL 686
Query: 408 -EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
E A ++LL LE ++ L+N+YA RCW AR+R LMK+ G+K PGCSW++
Sbjct: 687 GEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRK 746
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
F A D S+ +I +L L+ ++K LGYVP+
Sbjct: 747 GTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPD 783
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 149/282 (52%), Gaps = 4/282 (1%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E ++ ++ + R + D + +CG + R GA + +GF NV+VG+
Sbjct: 126 LEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNG 185
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNV---VSWTAIIAAFAQEWQVDMCLELY-RMMRNSM 231
L+++Y +C +A +VF+EM R V VSW +I+AA+ Q ++++ RM +
Sbjct: 186 LVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLG 245
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+ + ++L AC GA +G+ H +R G F + V N+++ MY KCG +EEA
Sbjct: 246 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 305
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF M KD+VSWN+M+ GY+Q G A+ LFE++ +++++ + +T+ VI+ G
Sbjct: 306 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 365
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
L E F M G +P + ++ AG L ++
Sbjct: 366 LGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKE 407
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 152/326 (46%), Gaps = 48/326 (14%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ DA L + +C S G A+R+G +V+VG++++ +Y+KC ++ +A
Sbjct: 246 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 305
Query: 191 KVFEEMPVR-----------------------------------NVVSWTAIIAAFAQEW 215
KVFE M V+ NVV+W+A+IA +AQ
Sbjct: 306 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 365
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF-------F 268
L+++R M EPN T S+LS C +G L G+ HC I+
Sbjct: 366 LGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPG 425
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD--IVSWNSMIAGYAQHGLAVRAIDLFE 326
+ V N+LI MY KC + + A +F+ + KD +V+W +I G AQHG A A++LF
Sbjct: 426 DDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFS 485
Query: 327 EMMK--QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS-CVVDLLG 383
+M++ V P+A T + +C G + G+ + ++ + + + C++D+
Sbjct: 486 QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYS 545
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
++G ++ AR M N V W +
Sbjct: 546 KSGDVDAARVVFDNMH-QRNGVSWTS 570
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V W +I ++ L+LYR M+ P+ +TF +L AC + G S H
Sbjct: 110 VFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHA 169
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK---DIVSWNSMIAGYAQHGL 317
GF + V N L+SMY +CG E A VF+ M + D+VSWNS++A Y Q G
Sbjct: 170 VVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGD 229
Query: 318 AVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
++RA+ +FE M + ++PDA++ + V+ +C G GK + GL ++ +
Sbjct: 230 SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGN 289
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
VVD+ + G++EEA ++M + + V W A
Sbjct: 290 AVVDMYAKCGMMEEANKVFERMKV-KDVVSWNA 321
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 221/383 (57%), Gaps = 18/383 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + +C S + G ++ G +NV+V ++L+ +Y+KC I ++ K+F
Sbjct: 310 FASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGST 369
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N V+W II + Q + L L+ M ++P + T++S+L A AL GR
Sbjct: 370 EKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQ 429
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H TI+ + VANSLI MY KCG +++A F+ M +D VSWN++I GY+ HGL
Sbjct: 430 IHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGL 489
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
+ A++LF+ M + KP+ +TF+GV+S+C + GL+++G+ +F SM + +G++P ++HY+
Sbjct: 490 GMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYT 549
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+V LLGR+G +EA I ++P P+ ++W A A+ L +EP+
Sbjct: 550 CMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQ 609
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
ATHV L+N+YA + WD A VRK MK K +K PG SW+E VV+ F D S+
Sbjct: 610 DDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPN 669
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
+ I +L++L + + GYVP+
Sbjct: 670 IKLIFAMLEWLYKKTRDAGYVPD 692
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 147/273 (53%), Gaps = 2/273 (0%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+S A+ SC + G A++ + ++YVG +L+ LY+K I +A + FEEMP
Sbjct: 208 ISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMP 267
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+++ W+ +I+ +AQ + LEL+ RM ++S++ PN+FTF S+L AC L G
Sbjct: 268 KDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGN 327
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H +++G S + V+N+L+ +Y KCG +E +V +F K+ V+WN++I GY Q G
Sbjct: 328 QIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLG 387
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+A++LF M+ ++P +T+ V+ + +E G+ K + +
Sbjct: 388 DGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVAN 447
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ + G +++AR +M + V W A
Sbjct: 448 SLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNA 479
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 125/239 (52%), Gaps = 6/239 (2%)
Query: 159 CLAI-----RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
CL++ + G A+ +VG++LI YS C + A +VF+ + +++VSWT ++A +A+
Sbjct: 123 CLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAE 182
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ + L L+ MR PN+FT ++ L +C G A G+S H +++ + + V
Sbjct: 183 NYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYV 242
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR- 332
+L+ +Y K G + EA F M D++ W+ MI+ YAQ + A++LF M +
Sbjct: 243 GIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSV 302
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
V P+ TF V+ +C L+ G + K GL + + ++D+ + G +E +
Sbjct: 303 VVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENS 361
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%)
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
R+ G C ++ G +++ + L+ Y + DA K+F+EMP+ N VS+ +
Sbjct: 16 NRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTL 75
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
F++ Q L + E N F FT++L S H ++G
Sbjct: 76 AQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGH 135
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ V +LI Y CGNV+ A VF+ ++ KD+VSW M+A YA++ ++ LF +
Sbjct: 136 QADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQ 195
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M +P+ T + SC + GK K +L +++L ++G
Sbjct: 196 MRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGE 255
Query: 388 LEEARDFIKQMP 399
+ EA+ F ++MP
Sbjct: 256 IAEAQQFFEEMP 267
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 229/417 (54%), Gaps = 37/417 (8%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFL------------- 138
+ + + +SNVF+Q+ + +V +++ + + RL++ A L
Sbjct: 255 YAKSGRSLQASNVFNQIGEKNIVSWNAMVA---NFAQNRLELAAVDLVRQMQADGEIPNS 311
Query: 139 ---STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+ + +C +R G AIRTG +++V ++L +Y+KC + A +VF+
Sbjct: 312 VTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK- 370
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ +R+ VS+ +I ++Q L L+ M ++ + ++ ++SAC AL QG
Sbjct: 371 ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQG 430
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H +R +++ +AN+L+ Y KCG ++ A VF + +D SWNSMI GY
Sbjct: 431 KEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGML 490
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G AI+LFE M + V+ D+++++ V+S+C HGGLVEEGK YF+ M +KP HY
Sbjct: 491 GELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHY 550
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEP 418
+C+VDLLGRAGL+EEA I+ +PI P+A +W AAE L+P
Sbjct: 551 ACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKP 610
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
+ + + L+N+YA WD+A +VRKLMK +G K NPGCSW++I N V+ F A ++
Sbjct: 611 QHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGER 667
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 14/307 (4%)
Query: 104 VFDQLLDTPVVDVEKLISMH--HDLHRE------RLKVDASFLSTAVT------SCGSTR 149
VFD++L+ VV +I + H + E + + + F V+ C
Sbjct: 64 VFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLE 123
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+ G C ++TG + V VG++L+ +Y KC + D+ +VF+E+ RN VSW AII
Sbjct: 124 DGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIIT 183
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ A + LE++R+M + ++PN TF+S+L G+ H ++R G S
Sbjct: 184 SLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLES 243
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
I VAN+LI MY K G +A VFN + K+IVSWN+M+A +AQ+ L + A+DL +M
Sbjct: 244 DIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQ 303
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
P+++TF V+ +C G + GK + G +L + + D+ + G L
Sbjct: 304 ADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLN 363
Query: 390 EARDFIK 396
AR K
Sbjct: 364 LARRVFK 370
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 148/291 (50%), Gaps = 5/291 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+++D + +C + +++ G + + GF ++V+VG++L+ Y C + D
Sbjct: 3 VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGS 249
+VF+EM R+VVSW ++I F+ + L+ M S PN + S+L C G
Sbjct: 63 RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGL 122
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
GR HC ++ G S + V N+L+ +Y KCG V+++ VF+ + ++ VSWN++I
Sbjct: 123 EDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAII 182
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
A A+++F M+ VKP+++TF ++ L + GK + GL+
Sbjct: 183 TSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLE 242
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAAESRLLL 416
++ + ++D+ ++G +A + Q+ + NA++ A++RL L
Sbjct: 243 SDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLEL 293
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 234/431 (54%), Gaps = 33/431 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMH-------------HDLHRERLKVDASFLSTAVTSCGSTRN 150
+FD++ D VV +I+ H ++ E + +D +S+ + +C +
Sbjct: 476 IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 535
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
I IR G ++++ + + ++ +Y +C + A ++FE + ++VVSWT++I+
Sbjct: 536 ISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISC 594
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ + LEL+ +M+ + +EP+ + SILSA AL +G+ H IR GF
Sbjct: 595 YVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLE 654
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+A++L+ MY +CG +E++ VFN + KD+V W SMI Y HG AIDLF M
Sbjct: 655 GSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMED 714
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLE 389
+ + PD I F+ V+ +C H GL+ EG+ + +SM ++ L+P +HY C+VDLLGRA LE
Sbjct: 715 ESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLE 774
Query: 390 EARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYA 432
EA F+K M + P A +W E A +LL ++PE +V ++N+YA
Sbjct: 775 EAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYA 834
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
R W VR MK GLK NPGCSWIE+ N V+ F A DKS+ + EI L + +
Sbjct: 835 AERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITE 894
Query: 493 QM-KTLGYVPE 502
++ K GYV +
Sbjct: 895 KLAKEGGYVAQ 905
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 203/410 (49%), Gaps = 30/410 (7%)
Query: 7 QTCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTE 66
+ C++ A QSL L F +Q Q S ++ VL++ + S +
Sbjct: 85 EICKRGSVNEAFQSLTDL------FANQSPSQFSLDEAYSS---VLELCGSKKALSEGQQ 135
Query: 67 VHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFD-----------QLLDTPVVD 115
VH +I +S L S + + + +FD ++ V +
Sbjct: 136 VHAHMITSNALFNSVFL-STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTN 194
Query: 116 VEKLISMHHDLHRER----LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVY 171
E L S+ +L+RE + +DA + +CG ++ R GA LAI+ G+++ V+
Sbjct: 195 GEPLGSL--ELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVF 252
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
V +S++ +Y+KC + A ++F+ MP + +VVSW ++I+A++ Q L L+ M+ +
Sbjct: 253 VANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKA 312
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
L PN +TF + L AC S + QG H ++ ++ + VAN+LI+MY + G + EA
Sbjct: 313 SLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEA 372
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI-SSCRH 349
+F NM D +SWNSM++G+ Q+GL A+ + EM KPD + + +I +S R
Sbjct: 373 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARS 432
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G + +++ +M K+GL +L + +VD+ + ++ +MP
Sbjct: 433 GNTLNGMQIHAYAM-KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 481
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 176/378 (46%), Gaps = 33/378 (8%)
Query: 92 FTGTNSTFGSSNVFDQLLDTP-VVDVEKLISMHH-------------DLHRERLKVDASF 137
+T N G+ +FD++ + VV +IS + ++ + L +
Sbjct: 261 YTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYT 320
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
A+ +C + I+ G +++ + NV+V ++LI +Y++ + +A +F M
Sbjct: 321 FVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMD 380
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ +SW ++++ F Q L+ Y MR++ +P+ SI++A SG G
Sbjct: 381 DWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQ 440
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++ G S +QV NSL+ MY K +++ +F+ M KD+VSW ++IAG+AQ+G
Sbjct: 441 IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGS 500
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
RA++LF E+ + + D + ++ +C L+ K + + GL +L +
Sbjct: 501 HSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNG 559
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCW 437
+VD+ G G ++ A + + + + V W + S H LAN
Sbjct: 560 IVDVYGECGNVDYAARMFELIE-FKDVVSWTSMIS--------CYVHNGLAN-------- 602
Query: 438 DQAARVRKLMKDKGLKTN 455
+A + LMK+ G++ +
Sbjct: 603 -EALELFHLMKETGVEPD 619
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 223/401 (55%), Gaps = 24/401 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
+ ++ + LHR +DA S A+ +C +R GF A+V + ++L+
Sbjct: 90 RAMAASNGLHR----IDALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLL 145
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPND 236
Y+K + A K+F+EMP ++ SW A+IA FAQ + D + RM + L PN
Sbjct: 146 DAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNA 205
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T L AC+ GAL +G S H + S +QV N +I MY KCG++++A +VF N
Sbjct: 206 VTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFEN 265
Query: 297 MH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M K +++WN+MI +A HG +A+DLFE++ + + PDA+++L V+ +C H GLVE+
Sbjct: 266 MRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVED 325
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
G F+SM + GL+P + HY +VDLLGRAG L+EA D + +P +PN V+W
Sbjct: 326 GLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLP-FPNMVLWQTLLGACR 384
Query: 408 -----EAAE--SRLLLEPE--CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
E AE SR L+E V L+N+YA + WD RVR M+ + +K PG
Sbjct: 385 TYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGF 444
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
S+IEI +Y+F D+S++ EI LD + ++K GY
Sbjct: 445 SYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGY 485
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/433 (33%), Positives = 230/433 (53%), Gaps = 56/433 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRN-------IRGGAPYQCLAIRTGFIANVYVGSSLIT 178
LH + L A L+ V T + I G A++ GF +++YV + L+
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLD 167
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC------------------ 220
+Y++ ++ A ++F+ MP +++VS TA++ +A+ ++D
Sbjct: 168 VYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVM 227
Query: 221 -------------LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
L L+R M + +PN+ T S+LSAC GAL GR H G
Sbjct: 228 IDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGI 287
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ V +L+ MY KCG++E+A VF+ + KD+V+WNSMI GYA HG + A+ LF+
Sbjct: 288 QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKS 347
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAG 386
M + + P ITF+G++S+C H G V EG F+ M ++G++P+++HY C+V+LLGRAG
Sbjct: 348 MCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAG 407
Query: 387 LLEEARDFIKQMPIYPNAVIWEAAES---------------RLLLEPECA--ATHVQLAN 429
+E+A + +K M I P+ V+W LL++ A T++ L+N
Sbjct: 408 HVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSN 467
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA V WD AR+R +MKD G+K PGCS IE+ N V+ F A ++ + EI +L+
Sbjct: 468 IYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEE 527
Query: 490 LVDQMKTLGYVPE 502
+ +K+ GY P+
Sbjct: 528 INGWLKSHGYTPQ 540
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+V WTAII A + L Y M +EPN FTF+SIL C + G++ H
Sbjct: 92 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALH 147
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-----------------HG--- 299
Q +++GF S + V L+ +Y + G+V A +F+ M HG
Sbjct: 148 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 207
Query: 300 -----------KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+D V WN MI GY Q+G+ A+ LF M+K + KP+ +T L V+S+C
Sbjct: 208 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 267
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G +E G+ + +G++ + + +VD+ + G LE+AR
Sbjct: 268 QLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDAR 311
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H R G + + L Y G ++ +V +F + W ++I G+A GL
Sbjct: 50 HAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLH 109
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+A++ + +M+ Q V+P+A TF ++ C +E GK K G +L + +
Sbjct: 110 EQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGL 165
Query: 379 VDLLGRAGLLEEARDFIKQMP 399
+D+ R G + A+ MP
Sbjct: 166 LDVYARGGDVVSAQQLFDTMP 186
>gi|125562361|gb|EAZ07809.1| hypothetical protein OsI_30067 [Oryza sativa Indica Group]
Length = 642
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/351 (37%), Positives = 202/351 (57%), Gaps = 19/351 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K + H + +E++++D L + +C T ++ G+ L + GF N Y+GSSL+
Sbjct: 91 KALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLV 150
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
++Y+KC ++ +A +VF MP RNVV WT++IA Q + ++L+R M+ + ++ +D
Sbjct: 151 SMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDA 210
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T +++S+C GAL GR H G + V NSLI MY KCG+V +A +F +
Sbjct: 211 TIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFRGL 270
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEG 356
+D+ +W MI G+A +GL V A+DLF +M + +V P+ + FLGV+++C HGGLVE+G
Sbjct: 271 TKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQG 330
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
+F M+K + L P ++HY C+VDLLGRA LL EA FIK MP+ P+ V+W
Sbjct: 331 YHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACR 390
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
AAE LEP+ HV L+N+YA W VR M +
Sbjct: 391 ASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTSRWVDVNNVRTGMGN 441
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 136/270 (50%), Gaps = 2/270 (0%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+ +D L+ A+++ ++ G+ + L+++ ++ +V ++LI +YS C A
Sbjct: 1 MTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASAR 60
Query: 191 KVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
V + P +VVSW IIA + + + L+ + M + ++ T ++L AC
Sbjct: 61 LVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACAR 120
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+GA+ G H + GF + +SL+SMY KCG VEEA VFN M +++V W SM
Sbjct: 121 TGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSM 180
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
IAG Q G A+DLF +M VK D T V+SSC G ++ G+ HGL
Sbjct: 181 IAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGL 240
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
EL + ++D+ + G + +A + +
Sbjct: 241 GKELSVKNSLIDMYSKCGDVNKAYQIFRGL 270
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++++ +SA +L G H ++++ S V N+LI+MY C A V
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 63
Query: 295 NNMH--GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
++ D+VSWN++IAGY + G+ +A+ F +M K++V+ D +T L V+ +C G
Sbjct: 64 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGA 123
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ G + + +G + S +V + + G++EEAR +MP N V W
Sbjct: 124 MKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMP-ERNVVCW 177
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 6/222 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + + D+ +K D + ++T V+SCG + G G + V +SL
Sbjct: 191 KEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSL 250
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS-MLEPN 235
I +YSKC + AY++F + R+V +WT +I FA L+L+ M + PN
Sbjct: 251 IDMYSKCGDVNKAYQIFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPN 310
Query: 236 DFTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ F +L+AC+ G + QG H + I+ ++ + + + EA
Sbjct: 311 EVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFI 370
Query: 295 NNMH-GKDIVSWNSMI---AGYAQHGLAVRAIDLFEEMMKQR 332
+M D+V W S++ Q GLA A + E++ +R
Sbjct: 371 KDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKR 412
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 218/396 (55%), Gaps = 25/396 (6%)
Query: 133 VDASFLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
V + F T V S + ++ G A++ G+ + V V +SLI +Y KC+ I DA +
Sbjct: 234 VPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALE 293
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+FE M +++ SW +I++ Q D L L M + ++P+ T T++L AC+ A
Sbjct: 294 IFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAA 353
Query: 252 LGQGRSAHCQTIRMGF------FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
L GR H I G + + N++I MY KCG++ +A VF M KD+ SW
Sbjct: 354 LMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASW 413
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-A 364
N MI GY HG A+++F M + ++KPD +TF+GV+S+C H G V +G+ + M +
Sbjct: 414 NIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKS 473
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------E 408
K+ + P ++HY+CV+D+LGRAG L+EA + MPI N V+W E
Sbjct: 474 KYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAE 533
Query: 409 AAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
A R+ LEPE ++V ++N+Y V +++ VR M+ + ++ PGCSWIE+ N V
Sbjct: 534 VAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGV 593
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ F + D+++ I L+ L +++ GYVP+V
Sbjct: 594 HVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPDV 629
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 146/288 (50%), Gaps = 9/288 (3%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + E + D A+ +C I+ L + G +V++GS+L
Sbjct: 121 EEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSAL 177
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ Y K ++ A FEE+P+R+VV W A++ +AQ Q +M LE +R M + + P+
Sbjct: 178 VNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSR 237
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT T +LS G L GR H ++MG+ S + V+NSLI MY KC +E+A+ +F
Sbjct: 238 FTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEM 297
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M KDI SWNS+++ + Q G + L + M+ ++PD +T V+ +C H + G
Sbjct: 298 MREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHG 357
Query: 357 KVYFDSMAKHGL---KPELDHY---SCVVDLLGRAGLLEEARDFIKQM 398
+ M GL ++D + V+D+ + G + +A ++M
Sbjct: 358 REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM 405
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 9/266 (3%)
Query: 138 LSTAVTSCGST---RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
L+T + S ++ +N+ G + GF+ + +SLI +YSKC + A +F
Sbjct: 37 LTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFS 96
Query: 195 EMPVR--NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
+ P NV ++ AII+ F + E Y+ MRN + P+ FTF + AC +
Sbjct: 97 D-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLD---V 152
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+ + H + G + + ++L++ Y K G +E A F + +D+V WN+M+ GY
Sbjct: 153 LEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGY 212
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
AQ G ++ F M + V P T GV+S G + G++ K G +
Sbjct: 213 AQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGV 272
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++D+ G+ +E+A + + M
Sbjct: 273 AVSNSLIDMYGKCKCIEDALEIFEMM 298
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN-MHGKD 301
L A L +G+ H + GF + SLI+MY KC + A+ +F++ H +
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+ ++N++I+G+ +G + +++M + V PD TF I +C V E K
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLD---VLEIKKIHG 160
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K GL+ ++ S +V+ + GL+E A+ +++PI + V+W A
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI-RDVVLWNA 207
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 207/352 (58%), Gaps = 18/352 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+ +V S+++ +Y KC +I +A K+ + + + VVSW AI++ F+ + + + + M
Sbjct: 422 DAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEML 481
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ L+P+ FTF ++L C + G+ H Q I+ ++++L+ MY KCG++
Sbjct: 482 DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMP 541
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+++ VF + +D VSWN+MI GYA HGL V A+ +FE M K+ V P+ TF+ V+ +C
Sbjct: 542 DSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACS 601
Query: 349 HGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GL ++G YF M H L+P+L+H++C+VD+LGR+ +EA FI MP +AVIW
Sbjct: 602 HVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIW 661
Query: 408 E-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
+ AA + LLL+P+ ++ ++ L+N+YA W +R R+L+K
Sbjct: 662 KTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQG 721
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
LK PGCSWIE + ++ F DK++ R E+ +L+ L+ +MK GY P+
Sbjct: 722 RLKKEPGCSWIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPD 773
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 136/319 (42%), Gaps = 39/319 (12%)
Query: 104 VFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGSTRN 150
+FD + D VV L+S + ++ R + D + + + SC +
Sbjct: 105 LFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEE 164
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G LA++TG +V GS+L+ +Y KCR + DA F MP RN VSW + IA
Sbjct: 165 LSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAG 224
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
Q Q LEL+ M+ L + ++ S +C L GR H I+ F S
Sbjct: 225 CVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSD 284
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V +++ +Y K ++ +A F + + + N+M+ G LF M++
Sbjct: 285 RVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG------------LF--MIR 330
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
++ D ++ GV S+C E K YF H L V+DL G+ L E
Sbjct: 331 SSIRFDVVSLSGVFSAC------AETKGYFPGQQVHCLA-----IKSVLDLYGKCKALME 379
Query: 391 ARDFIKQMPIYPNAVIWEA 409
A + M ++V W A
Sbjct: 380 AYLIFQGMK-QKDSVSWNA 397
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++++T YS I A +F+ MP +VVSW A+++ + Q ++L+ M +
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ TF +L +C+ L G H ++ G ++ ++L+ MY KC ++++A+
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M ++ VSW S IAG Q+ VR ++LF EM + + ++ SC +
Sbjct: 207 FYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCL 266
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G+ K+ + + +VD+ +A L +AR +P
Sbjct: 267 NTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 117/301 (38%), Gaps = 52/301 (17%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
++ R L V ++A SC + + G AI+ F ++ VG++++ +Y+K
Sbjct: 240 EMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKAN 299
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA + F +P V + A++ M S + + + + + S
Sbjct: 300 SLTDARRAFFGLPNHTVETSNAMMVGL--------------FMIRSSIRFDVVSLSGVFS 345
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC + G+ HC I+ S++ +Y KC + EA +F M KD VS
Sbjct: 346 ACAETKGYFPGQQVHCLAIK-----------SVLDLYGKCKALMEAYLIFQGMKQKDSVS 394
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMK-----QRVKPDAITFLGVISSC-----RHGGL-- 352
WN++IA Q+G I F EM++ D G+I R GG
Sbjct: 395 WNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 454
Query: 353 ---------------VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
E + +F M GLKP+ ++ V+D +E + Q
Sbjct: 455 VSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 514
Query: 398 M 398
+
Sbjct: 515 I 515
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
LK D +T + +C + I G I+ + + Y+ S+L+ +Y+KC + D+
Sbjct: 485 LKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSL 544
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
VFE++ R+ VSW A+I +A L ++ M+ + PN TF ++L AC+ G
Sbjct: 545 LVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVG 604
Query: 251 ALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSM 308
G R H T ++ ++ + + +EAV N+M + D V W ++
Sbjct: 605 LFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTL 664
Query: 309 IA 310
++
Sbjct: 665 LS 666
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 34/210 (16%)
Query: 234 PNDFTFTSILSACTGSG--ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
P TF+ + +C +G AL GR+AH + + GF V+N L+ MY +C A
Sbjct: 13 PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72
Query: 292 YVFNNMHGKDIVSWNSM-------------------------------IAGYAQHGLAVR 320
VF+ M +D VSWN+M ++GY Q G+
Sbjct: 73 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
++DLF EM ++ V PD TF ++ SC + G K GL+ ++ S +VD
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVD 192
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIWEAA 410
+ G+ L++A F MP N V W +A
Sbjct: 193 MYGKCRSLDDALCFFYGMP-ERNWVSWGSA 221
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 223/392 (56%), Gaps = 23/392 (5%)
Query: 133 VDASFLSTAVTSCG--STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+D+ + + +++C S + I G ++ GF ++ VG++L+ Y+KC + +
Sbjct: 2122 LDSVVMVSVLSACSRVSGKGITEGV--HGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSK 2179
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGS 249
KVF+ M ++ +SW ++IA +AQ LE++ M+R+ + N T +++L AC +
Sbjct: 2180 KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHA 2239
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
GAL G+ H Q I+M + V S+I MYCKCG VE A F+ M K++ SW +M+
Sbjct: 2240 GALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMV 2299
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGL 368
AGY HG A A+D+F +M++ VKP+ ITF+ V+++C H GLVEEG +F++M K+ +
Sbjct: 2300 AGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDI 2359
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAE 411
+P ++HY C+VDL GRAG L EA + IK+M + P+ V+W AA+
Sbjct: 2360 EPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQ 2419
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
L+P+ +V L+NLYA W R+R LMK++ L PG S +E+ V+ F
Sbjct: 2420 KLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFL 2479
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
DK + I L+ L +++ +GYVP +
Sbjct: 2480 VGDKEHPHHEMIYKYLEKLTLELQKIGYVPNM 2511
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 167/320 (52%), Gaps = 32/320 (10%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++ ++ + + D + +C + +I G I+ GF +V+V ++L
Sbjct: 107 EQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNL 166
Query: 177 ITLYSKC-------------RV------------------IIDAYKVFEEMPVRNVVSWT 205
I Y KC RV + +A ++F+E+P +NVVSWT
Sbjct: 167 IDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWT 226
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
A+I + + Q + LEL++ M+ + PN++T S++ ACT G L GR H I+
Sbjct: 227 AMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKN 286
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
+ + +LI MY KCG++++A+ VF M K + +WNSMI HGL A++LF
Sbjct: 287 CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLF 346
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGR 384
EM + VKPDAITF+GV+ +C H V+EG YF M +H G+ P +HY C+ +L R
Sbjct: 347 SEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYAR 406
Query: 385 AGLLEEARDFIKQMPIYPNA 404
+ L+EA K++ N+
Sbjct: 407 SNNLDEAFKSTKEVGSLANS 426
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 10/273 (3%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
+SF T + SC + ++ G A GF +++V S+LI +YSKC + DA +F+
Sbjct: 2016 SSFPCT-IKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFD 2074
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND--------FTFTSILSAC 246
E+P+RNVVSWT++I + Q Q D L L++ E D S+LSAC
Sbjct: 2075 EIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSAC 2134
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ G H ++ GF I V N+L+ Y KCG + VF+ M KD +SWN
Sbjct: 2135 SRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWN 2194
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
SMIA YAQ GL+ A+++F M++ V+ +A+T V+ +C H G + GK D + K
Sbjct: 2195 SMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK 2254
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L+ + + ++D+ + G +E A+ +M
Sbjct: 2255 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 2287
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
IR+G + + LI LYS I A +F ++ +W II A + L
Sbjct: 51 IRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQAL 110
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
LY+ M + + FTF ++ ACT ++ G+ H I+ GF + V N+LI Y
Sbjct: 111 MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFY 170
Query: 282 CK-------------------------------CGNVEEAVYVFNNMHGKDIVSWNSMIA 310
K CG+++EA +F+ + K++VSW +MI
Sbjct: 171 FKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMIN 230
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY ++ A++LF+ M + + P+ T + +I +C G++ G+ D K+ ++
Sbjct: 231 GYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI 290
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + ++D+ + G +++A + + MP
Sbjct: 291 GVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NV SW ++IA A+ L + +R L P +F + +C+ L GR +H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
Q GF + + V+++LI MY KCG +++A +F+ + +++VSW SMI GY Q+ A
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098
Query: 320 RAIDLFEEMMKQR--------VKPDAITFLGVISSCRH--GGLVEEGKVYFDSMAKHGLK 369
A+ LF++ +++ V D++ + V+S+C G + EG F + K G
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGF--VVKKGFD 2156
Query: 370 PELDHYSCVVDLLGRAG 386
+ + ++D + G
Sbjct: 2157 GSIGVGNTLMDAYAKCG 2173
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H + IR G + + LI +Y G + A+ +F + +WN +I +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
GL+ +A+ L++ M+ Q + D TF VI +C + ++ GKV S+ K+G ++
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL 415
+ ++D + G A ++M + N V W S L+
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLI 202
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A + + + ++ SWNS+IA A+ G +V A+ F + K + P +F I SC
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-- 407
+ G++ G + +L S ++D+ + G L++AR ++P+ N V W
Sbjct: 2028 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTS 2086
Query: 408 --------EAAESRLLL 416
E A++ LLL
Sbjct: 2087 MITGYVQNEQADNALLL 2103
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 199/342 (58%), Gaps = 20/342 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSML 232
++L++ Y++C + DA +F MP RNV+SWTA+++ +AQ + + + + M +
Sbjct: 155 NALLSAYARCGRVDDAESLFAGMPDRNVISWTAMVSGYAQNGRHEEAVRTFLEMWEGCGV 214
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PN+ T +S+L AC GAL GR G + + VAN+L+ MY KCG++ A
Sbjct: 215 RPNEVTVSSVLPACAAVGALALGRKVERYARGRGMLTNVYVANALVEMYAKCGSIRRAWM 274
Query: 293 VFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF + +D+ SWNSMI +A HGL + LF ++ KPD ITF+GVI +C HGG
Sbjct: 275 VFRGIGKQRDLCSWNSMIMAFAVHGLWREVLGLFHKLRMTGAKPDGITFVGVILACTHGG 334
Query: 352 LVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-- 408
LV+EGK+ F+SM + GLKP ++HY C+VDLLGRAGLL+EA I MP+ P+AVIW
Sbjct: 335 LVDEGKLLFNSMREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGAL 394
Query: 409 ---------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
A E + LEP+ A V L+N+YA WD A+V KL+K+K K
Sbjct: 395 LGACSFHGNLELAEVAVEKLMRLEPQNTANLVILSNIYASHGKWDGVAQVWKLLKEKDHK 454
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
+ G S+IE+ +++F EDKS+ + LD + MK
Sbjct: 455 KSAGYSFIELDGRMHKFLVEDKSHPIYEMVYDTLDSITLIMK 496
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM- 196
+S+ + +C + + G + A G + NVYV ++L+ +Y+KC I A+ VF +
Sbjct: 221 VSSVLPACAAVGALALGRKVERYARGRGMLTNVYVANALVEMYAKCGSIRRAWMVFRGIG 280
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
R++ SW ++I AFA L L+ +R + +P+ TF ++ ACT G + +G+
Sbjct: 281 KQRDLCSWNSMIMAFAVHGLWREVLGLFHKLRMTGAKPDGITFVGVILACTHGGLVDEGK 340
Query: 257 SA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQ 314
+ G I+ ++ + + G ++EA + +M + D V W +++ +
Sbjct: 341 LLFNSMREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLGACSF 400
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
HG A E++M R++P L ++S+
Sbjct: 401 HGNLELAEVAVEKLM--RLEPQNTANLVILSN 430
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 231/395 (58%), Gaps = 32/395 (8%)
Query: 121 SMHHDLH--RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
+H DLH +++ +SF S + C + + G +++ TG +V + ++++
Sbjct: 108 GLHSDLHVLTAFVQMYSSFGSGCI--CDARKMFDG------MSMSTG---DVALWNAMLN 156
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
Y+K + +A +FE MP RNV+SWTA+I +AQ + + L+R M+ +EP++
Sbjct: 157 GYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHDAIALFRRMQLENVEPDEIA 216
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNM 297
L+AC GAL G R+G + I + N+LI MY K G+++ A+ VF NM
Sbjct: 217 MLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENM 276
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+ K I++W +MIAG A HGL A+++F M + RVKP+ ITF+ ++S+C H GLV+ G+
Sbjct: 277 NHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGR 336
Query: 358 VYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------- 407
YF+ M +++G++P+++HY C++DLLGRAG L+EA+ + QMP PNAVIW
Sbjct: 337 WYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNT 396
Query: 408 -------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
E A LL LEP+ + + L+N+YA W+++ VRK+M D G+K PG S
Sbjct: 397 HGDPELGELALQHLLELEPDNSGNYALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGS 456
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
IE+ N V+ F A + S+++ I VL + Q+
Sbjct: 457 LIEVNNRVHEFIAGEISHSQFDRIQEVLSKINRQL 491
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 40/214 (18%)
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY- 281
LY ++ + L P+ ++F L A T ++ GR H Q+IR G S + V + + MY
Sbjct: 65 LYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYS 124
Query: 282 -----CKC-----------------------------GNVEEAVYVFNNMHGKDIVSWNS 307
C C G++ A +F M ++++SW +
Sbjct: 125 SFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTA 184
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG---KVYFDSMA 364
+I GYAQ AI LF M + V+PD I L +++C G +E G + Y D +
Sbjct: 185 LITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLG 244
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L + + ++D+ ++G ++ A + M
Sbjct: 245 L--LTTNIPLNNALIDMYAKSGDIKSALQVFENM 276
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 223/401 (55%), Gaps = 24/401 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
+ ++ + LHR +DA S A+ +C +R GF A+V + ++L+
Sbjct: 90 RAMAASNGLHR----IDALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLL 145
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPND 236
Y+K + A K+F+EMP ++ SW A+IA FAQ + D + RM + L PN
Sbjct: 146 DAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNA 205
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T L AC+ GAL +G S H + S +QV N +I MY KCG++++A +VF N
Sbjct: 206 VTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFEN 265
Query: 297 MH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M K +++WN+MI +A HG +A+DLFE++ + + PDA+++L V+ +C H GLVE+
Sbjct: 266 MRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVED 325
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
G F+SM + GL+P + HY +VDLLGRAG L+EA D + +P +PN V+W
Sbjct: 326 GLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLP-FPNMVLWQTLLGACR 384
Query: 408 -----EAAE--SRLLLEPE--CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
E AE SR L+E V L+N+YA + WD RVR M+ + +K PG
Sbjct: 385 TYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGF 444
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
S+IEI +Y+F D+S++ EI LD + ++K GY
Sbjct: 445 SYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGY 485
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 222/400 (55%), Gaps = 26/400 (6%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE + +S+ + +C I +I+ +N +V ++L+ +Y+KC
Sbjct: 142 MQREVTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTALLHVYAKCSS 201
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I DA ++FE MP +N V+W++++A + Q D L L+ + + + F +S +SA
Sbjct: 202 IKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISSAVSA 261
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN-MHGKDIVS 304
C G L +G+ H + + GF S I VA+SLI MY KCG + EA VF + + IV
Sbjct: 262 CAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVL 321
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN+MI+G+A+H LA A+ LFE+M ++ PD +T++ V+++C H GL EEG+ YFD M
Sbjct: 322 WNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMV 381
Query: 365 K-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE--------------- 408
+ H L P + HYSC++D+LGRAGL+++A D I +M + +W
Sbjct: 382 RQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIGRMSFNATSSMWGSVRGLSXLIKASCRI 441
Query: 409 ---------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
AA+ +EP A H+ LAN+YA + D+ AR RKL+++ ++ G S
Sbjct: 442 YGNIEFAEIAAKHLFEMEPNNAGNHILLANIYAANKKSDEVARARKLLRETDVRKERGTS 501
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
WIEI N ++ F ++++ ++ + LD LV ++K L Y
Sbjct: 502 WIEIKNKIHSFTVGERNHPQIDDNYAKLDNLVVELKKLNY 541
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C T + GG IR G ++ + LI +YSKC ++ K +EM V++++
Sbjct: 60 CAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILX 119
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
I A Q + L+L M+ + N+FT +S+L C A+ + H +I+
Sbjct: 120 NTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHAFSIK 179
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
S V +L+ +Y KC ++++A +F +M K+ V+W+SM+AGY Q+G A+ L
Sbjct: 180 AAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLL 239
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F D +S+C + EGK K G + S ++D+ +
Sbjct: 240 FHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAK 299
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G + EA + + V+W A
Sbjct: 300 CGCIREAYLVFEGFVEVRSIVLWNA 324
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 1/168 (0%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+L C +G+ GR+ H Q IR+G I + LI+MY KC V + M K
Sbjct: 56 LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKS 115
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
++ N+ I Q+ +A+ L M ++ + T V+ +C + E
Sbjct: 116 LILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHA 175
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K + + ++ + + +++A + MP NAV W +
Sbjct: 176 FSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSS 222
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 227/391 (58%), Gaps = 24/391 (6%)
Query: 135 ASFLSTAVTSCGSTRNIRG--GAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYK 191
++F T++ S G TR + G C +++ + + +G SL+ +Y KC+++ DA K
Sbjct: 626 SNFTFTSILS-GCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANK 684
Query: 192 VFEEMPV-RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+ EE+P +N+V WTA I+ +AQ L ++ MR+ + ++ TFTS+L AC+
Sbjct: 685 LLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMA 744
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMI 309
AL G+ H ++ GF SY ++L+ MY KCG+V + +F + + +I+ WNSMI
Sbjct: 745 ALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMI 804
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGL 368
G+A++G A A+ LF++M + ++KPD +T LGV+ +C H GL+ EG +FDSM++ +G+
Sbjct: 805 VGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGI 864
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAE 411
P +DHY+C++DLLGR G L++A++ I Q+P + VIW AA+
Sbjct: 865 VPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAK 924
Query: 412 SRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
+ +EP+ ++T+V L++L+A W +A R+ M++KG+ PGCSWI + N F
Sbjct: 925 KLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQSVFV 984
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+D + I +LD L M G + E
Sbjct: 985 VQDTHHPDALSIYKMLDDLTGMMNKDGRIKE 1015
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 156/293 (53%), Gaps = 4/293 (1%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
++ ++ D+ ++ L S ++ +++ + G A++ G ANV+VGSSLI
Sbjct: 307 EVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLI 366
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
LY K I DA KVF+ +N+V W AI+ F Q + +++++ MR + LE +DF
Sbjct: 367 NLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDF 426
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF S+L AC +L GR HC TI+ G + + VAN+++ MY K G ++ A +F+ +
Sbjct: 427 TFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLI 486
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
KD VSWN++I G A + AI++ + M + D ++F I++C + +E GK
Sbjct: 487 PVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGK 546
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM---PIYP-NAVI 406
+ K+ + S ++DL + G +E +R + + I P NA+I
Sbjct: 547 QIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALI 599
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 149/297 (50%), Gaps = 1/297 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I M + R L+ D + + +C + ++ G C+ I+ G A+++V +++
Sbjct: 407 EETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAM 466
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +YSK I A +F +PV++ VSW A+I A + + + + M+ + ++
Sbjct: 467 LDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDE 526
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+F + ++AC+ A+ G+ H +I+ S V +SLI +Y K G+VE + V +
Sbjct: 527 VSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAH 586
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC-RHGGLVEE 355
+ IV N++I G Q+ AI+LF++++K KP TF ++S C R V
Sbjct: 587 VDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIG 646
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
+V+ ++ L + +V + + LLE+A ++++P + N V W A S
Sbjct: 647 KQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATIS 703
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 134/263 (50%), Gaps = 6/263 (2%)
Query: 152 RGGAPYQCLAI-----RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
R G Q LA+ + G + + ++I+ + + DA + + + + + V+W A
Sbjct: 235 RVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNA 294
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+IA+++Q LY+ M+ L P TF SILSA A +GR H ++ G
Sbjct: 295 VIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHG 354
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ + V +SLI++Y K G + +A VF+ K+IV WN+++ G+ Q+ L I +F+
Sbjct: 355 LDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQ 414
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
M + ++ D TF+ V+ +C + ++ G+ K+G+ +L + ++D+ + G
Sbjct: 415 YMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLG 474
Query: 387 LLEEARDFIKQMPIYPNAVIWEA 409
++ A+ +P+ ++V W A
Sbjct: 475 AIDVAKALFSLIPV-KDSVSWNA 496
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ +++C + G C +++GF ++V+ + L+ +Y+KC + DA ++F+ +
Sbjct: 160 IAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIA 219
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ + WT++IA + + + L L+ M P+ T +I+S G LG R+
Sbjct: 220 CPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDART 279
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+ IRM V+WN++IA Y+Q GL
Sbjct: 280 L-LKRIRM----------------------------------TSTVAWNAVIASYSQSGL 304
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
L+++M KQ + P TF ++S+ + +EG+ + KHGL + S
Sbjct: 305 DSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSS 364
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+++L + G + +A+ + N V+W A
Sbjct: 365 LINLYVKHGCISDAKK-VFDFSTEKNIVMWNA 395
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE---EMPVRNVVSWTAIIAAFAQEWQVD 218
+R G +G +L+ LY + + A++ P + + +++++ A+
Sbjct: 80 LRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAA-SSVLSCHARSGSPR 138
Query: 219 MCLELYRMMRNSMLE-PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
L+ ++ +R S+ P+ F +LSAC+ GAL GR HC ++ GF S + L
Sbjct: 139 DVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGL 198
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ MY KCG V++A +F+ + D + W SMIAGY + G +A+ LF M K PD
Sbjct: 199 VDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQ 258
Query: 338 ITFLGVISS 346
+T + +IS+
Sbjct: 259 VTCVTIIST 267
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D + ++ + +C + G L +++GF++ S+L+ +YSKC +I ++
Sbjct: 726 VRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSF 785
Query: 191 KVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
++F+E+ R N++ W ++I FA+ + L L++ M+ S ++P+D T +L AC+ +
Sbjct: 786 EIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHA 845
Query: 250 GALGQGRSAHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNS 307
G + +G ++ G + LI + + G++++A V + + + D V W +
Sbjct: 846 GLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWAT 905
Query: 308 MIAGYAQH 315
+A H
Sbjct: 906 YLAACQMH 913
>gi|147860852|emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 202/344 (58%), Gaps = 15/344 (4%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF +M R+VV+W ++I + + + L +R M NS +EP+ FTF S+++ C
Sbjct: 146 AKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCAR 205
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
G+ H I ++++LI +Y KCG + A VFN++ D+ WNSM
Sbjct: 206 LGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSM 265
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-G 367
I G A HGLA+ AI +F +M + V PD+ITF+G++++C H GLVE+G+ YFD M +H
Sbjct: 266 INGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYS 325
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES--RLLLEPEC----- 420
++P+L+HY +VDLLGRAGL+EEA IK MP+ P+ VIW A S R PE
Sbjct: 326 IQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAI 385
Query: 421 -------AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
+ ++ L+N+Y + WD A RVR++MK G++ N G SW+E+ V+++F+A
Sbjct: 386 AKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAG 445
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
D+S+ I VL+ L+ + K G++P +D + +R E
Sbjct: 446 DRSHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREE 489
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 34/201 (16%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC----------------- 284
IL AC S +H + I+ G+ +Y + SL+S Y C
Sbjct: 65 ILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWG 124
Query: 285 ----------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
G + A VF M +D+V+WNSMI G ++ A+ F EM
Sbjct: 125 FDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREM 184
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
+ V+PD TF VI+ C G ++ M + ++ S ++DL + G +
Sbjct: 185 LNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRI 244
Query: 389 EEARDFIKQMPIYPNAVIWEA 409
A+ + + + +W +
Sbjct: 245 NTAKKVFNSIQ-HDDVSVWNS 264
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 4/198 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++ ++ D ++ + C + L I N + S+L
Sbjct: 175 EEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSAL 234
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I LYSKC I A KVF + +V W ++I A + ++ M + P+
Sbjct: 235 IDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDS 294
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN--SLISMYCKCGNVEEAVYVF 294
TF IL+AC+ G + QGR + +R + Q+ + +++ + + G VEEA +
Sbjct: 295 ITFIGILTACSHCGLVEQGRR-YFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMI 353
Query: 295 NNMHGK-DIVSWNSMIAG 311
M + DIV W ++++
Sbjct: 354 KAMPMEPDIVIWRALLSA 371
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 205/367 (55%), Gaps = 18/367 (4%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+ V +++I+ YS+ + DA +F++M +++V W+A+I+ +A+ + L L+ M+
Sbjct: 13 NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQ 72
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
++P+ T S++SAC G L + + H + G + V N+LI MY KCGN+
Sbjct: 73 VFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLG 132
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A VF M ++++SW SMI +A HG A A+ F +M + +KP+ +TF+GV+ +C
Sbjct: 133 AARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACS 192
Query: 349 HGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLVEEG+ F SM +H + P+ +HY C+VDL GRA LL +A + ++ MP+ PN VIW
Sbjct: 193 HAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIW 252
Query: 408 E-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AA+ L LEP+ VQL+N+YA R W +R LMK +
Sbjct: 253 GSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQR 312
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
G+ GCS IE+ N VY F DK + + +I LD +V ++K +GY P VD
Sbjct: 313 GISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVDV 372
Query: 511 ASHKRTE 517
+ E
Sbjct: 373 EEEGKKE 379
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 227/414 (54%), Gaps = 54/414 (13%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKC-------------------RVIID---------A 189
C A++ G ++ YV +++++ YSKC V +D A
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAYFESA 60
Query: 190 YKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
YKVFE MP +++V+W ++I FA + + L LY+ M + +EP+ FT S+LSAC
Sbjct: 61 YKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAEL 120
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSM 308
L GR AH +++G + N+L+ +Y KCG + EA +F+ M +++VSW S+
Sbjct: 121 ATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSL 180
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHG 367
I G A +G A++ F++M ++ + P ITF+GV+ +C H G+V EG YF M ++
Sbjct: 181 IVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYD 240
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----------------AE 411
+ P ++HY C+VDLLGRAGLL+EA D+I+ MP+ PNAVIW A
Sbjct: 241 IVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFAR 300
Query: 412 SRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
+RLL LEP+ + +V L+NLYA + W VR+ M +G++ PG S +E+ N V+ F
Sbjct: 301 ARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEF 360
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRTE 517
D+++ + I +L + ++K GYVP ++ EE+ + A +E
Sbjct: 361 VMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSE 414
>gi|147833682|emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
Length = 583
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/412 (35%), Positives = 226/412 (54%), Gaps = 31/412 (7%)
Query: 123 HHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
H L + + D + +C + G ++ GF +BVY+ +SL+ Y+
Sbjct: 116 HRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSBVYINNSLVHFYAT 175
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
C + A VF+ M R++VSW +I AF + + D L L+ M+ EP+ +T SI
Sbjct: 176 CDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQSI 234
Query: 243 LSACTGSGALGQGRSAHCQTIR---MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+AC G G+L G AH ++ + + + SL+ MYCKCG++E A+ +F+ M
Sbjct: 235 ANACAGMGSLSLGMWAHVFLLKKXDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPK 294
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKV 358
+D+ SWNSMI G++ HG A++ F M++ +++ P+AITF+GV+S+C HGGLV EG+
Sbjct: 295 RDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRR 354
Query: 359 YFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------- 407
YFD M ++ +KPEL+HY C+VDLL RAGL++EA D + MP+ P+ VIW
Sbjct: 355 YFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQ 414
Query: 408 -------EAAESRLLLEPE---CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
E SR +LE E C+ +V L+ +YA W+ VRKLM DKG+ PG
Sbjct: 415 NAGVELSEEMASR-VLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPG 473
Query: 458 CSWIEIMNV-VYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKV 508
CS IEI + V R E + S P++D +D + Y +H E++
Sbjct: 474 CSSIEIXALDVIEERVERVGYSPDSSQAPMVDETIDGKQ---YSLRLHSERL 522
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 6/236 (2%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW-QVDMCLELY-RM 226
N + S I +S + A++VF ++ N W A+I A A+ + + LY RM
Sbjct: 59 NTFFLYSRILHFSSLHDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRM 118
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
+ + + TF +L AC AL +G H Q +++GF S + + NSL+ Y C
Sbjct: 119 LEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSBVYINNSLVHFYATCDR 178
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ A VF+ M + +VSWN +I + + G A++LF EM K +PD T + ++
Sbjct: 179 LDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQK-FFEPDGYTIQSIANA 237
Query: 347 CRHGGLVEEG---KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
C G + G V+ ++ + +VD+ + G LE A +MP
Sbjct: 238 CAGMGSLSLGMWAHVFLLKKXDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMP 293
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 209/359 (58%), Gaps = 24/359 (6%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+SLI+ + + + A +VF+EMP R +VSWT +I +A+ L ++R M+ +E
Sbjct: 176 NSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIE 235
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P++ + S+L AC GAL G+ H + + GF V N+L+ MY KCG ++EA +
Sbjct: 236 PDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGL 295
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
FN M KD++SW++MI G A HG AI +FE+M K V P+ +TF+GV+S+C H GL
Sbjct: 296 FNQMIEKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLW 355
Query: 354 EEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
EG YFD M + L+P+++HY C+VDLLGR+G +E+A D I +MP+ P++ W
Sbjct: 356 NEGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLS 415
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A E L LEPE + +V LAN+YA + W+ + VRKL++ K +K
Sbjct: 416 SCRIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKT 475
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL-VDQMKTLGYVPEVHEEKVDDASH 513
PGCS IE+ N+V F + D S E+ +L L + Q++T ++ E V+DA
Sbjct: 476 PGCSLIEVNNLVQEFVSGDDSKPFSQEVFWILKGLTLHQIRTKDFI-----EFVEDAGQ 529
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 33/251 (13%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACT 247
A +F+++ NV S+ AII + + + + ++ +M+ P+ FTF ++ +C
Sbjct: 58 ATMIFQQLENPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCA 117
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G G+ H + G ++ N+LI MY KCG++ A V+ M +D VSWNS
Sbjct: 118 GLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNS 177
Query: 308 -------------------------------MIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
MI GYA+ G A+ +F EM ++PD
Sbjct: 178 LISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPD 237
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
I+ + V+ +C G +E GK K G ++ +V++ + G ++EA
Sbjct: 238 EISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFN 297
Query: 397 QMPIYPNAVIW 407
QM I + + W
Sbjct: 298 QM-IEKDVISW 307
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 212/400 (53%), Gaps = 19/400 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ M+ + + D + + +C T N R GA +R G +V + +SL+ +
Sbjct: 197 LGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDM 256
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K A +VF MP RN VSW A+I+ FAQ D L+L+R M S L+P+
Sbjct: 257 YAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGAL 316
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S L AC G L G+S H +R F I + +++ MY KCG++E A +FN +
Sbjct: 317 VSALLACADVGFLKLGKSIHGFILRRLEFQCI-LGTAVLDMYSKCGSLESARKLFNKLSS 375
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+V WN+MIA HG A+ LF+E+ + +KPD TF ++S+ H GLVEEGK +
Sbjct: 376 RDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFW 435
Query: 360 FDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
FD M + G++P H CVVDLL R+GL+EEA + + M P IW A
Sbjct: 436 FDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNK 495
Query: 410 --------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
A+ L +PE ++NLYA + WD+ +RKLMKD G K PG S I
Sbjct: 496 KLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLI 555
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
E+ + F ED+S+ + EIL ++ L +M+ +GYVP
Sbjct: 556 EVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVP 595
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 147/283 (51%), Gaps = 12/283 (4%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
+ D++ + A+T+C ++ + A G+ +V+V S+L+ +YS+C + DA +
Sbjct: 108 RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIR 167
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+ MP ++ V+W+ ++A F + L +Y MR + ++ ++ ACT +G
Sbjct: 168 VFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGN 227
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
G S H + +R G + +A SL+ MY K G+ + A VF M ++ VSWN++I+G
Sbjct: 228 TRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISG 287
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+AQ+G A A+DLF EM ++PD+ + + +C G ++ GK + HG
Sbjct: 288 FAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGK------SIHGFILR 341
Query: 372 LDHYSC-----VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ C V+D+ + G LE AR ++ + V+W A
Sbjct: 342 RLEFQCILGTAVLDMYSKCGSLESARKLFNKLS-SRDLVLWNA 383
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 4/237 (1%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRN--VVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
SL Y++ + A P + +W A++AA ++ L ++R + +S
Sbjct: 49 SLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPSSA- 107
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
P+ TFT L+AC G L + + G+ + V ++L+ +Y +CG + +A+
Sbjct: 108 RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIR 167
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF+ M KD V+W++M+AG+ G V A+ ++ M + V D + +GVI +C G
Sbjct: 168 VFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGN 227
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G +HG++ ++ + +VD+ + G + AR + MP Y NAV W A
Sbjct: 228 TRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMP-YRNAVSWNA 283
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 245/505 (48%), Gaps = 101/505 (20%)
Query: 104 VFDQLLDTPVV-------------DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VF ++L+ VV V K ++M H + E L+ D+ LS+ +++ T N
Sbjct: 340 VFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSN 399
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR----------- 199
I+ G C IR ++V V +S+I +Y+KC I DA KVF+ R
Sbjct: 400 IKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAA 459
Query: 200 ------------------------NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
NV+SW ++I F + QV+ +++ M++ +PN
Sbjct: 460 YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPN 519
Query: 236 DFTFTSILS-----------------------------------ACTGSGALGQGRSAHC 260
T+T+++S ACT +L GR+ H
Sbjct: 520 LITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHG 579
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
R F + VA SL+ MY KCG+++EA VF+ M K++ +N+MI+ YA HG AV
Sbjct: 580 FITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVE 639
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG-KVYFDSMAKHGLKPELDHYSCVV 379
A+ LF+ + K+ ++PD+ITF ++S+C H GLV EG ++ D ++KH + P ++HY CVV
Sbjct: 640 ALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVV 699
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAA 422
LL R G L+EA I MP P+A I + ++ LEP +
Sbjct: 700 SLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSG 759
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
+V L+N YA W + + +R LMK +GL+ NPGCSWI+ + F A D S+ + E
Sbjct: 760 NYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEE 819
Query: 483 ILPVLDFLVDQMKTLGYVPEVHEEK 507
I +L L+ +M+ +GYVP E+
Sbjct: 820 IYAMLAMLLSEMRFMGYVPIASNEE 844
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 21/312 (6%)
Query: 104 VFDQLLDTPVVDVEKLI--SMHHDLHRERLKV---------------DASFLSTAVTSCG 146
VFD +++ VV +I + + L++E + V ASFLS +
Sbjct: 239 VFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDA 298
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+G A +AI + +GSS+I YSK +I DA VF M ++VV+W
Sbjct: 299 LIEGKQGHA----IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNL 354
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I+++ Q QV L + +MR+ L + T +SILSA + + G+ HC IR
Sbjct: 355 LISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRN 414
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
S + VANS+I MY KC +++A VF++ +D+V WN+++A YAQ GL+ A+ LF
Sbjct: 415 LESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFY 474
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+M V P+ I++ VI G V E K F M G +P L ++ ++ L ++G
Sbjct: 475 QMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSG 534
Query: 387 LLEEARDFIKQM 398
EA F ++M
Sbjct: 535 FGYEAILFFQKM 546
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 143/286 (50%), Gaps = 5/286 (1%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG--FIANVYVGSSLITLYSK 182
++ E ++ + C R + G ++ G F N YV + L+ Y+K
Sbjct: 69 EMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAK 128
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTS 241
C A ++F + VRNV SW AI+ + + D L M N + P++F +
Sbjct: 129 CDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVF-PDNFVLPN 187
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+L AC +G G+ H ++MGF + + V++SL+ MY KCG +E+A VF++M K+
Sbjct: 188 VLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKN 247
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+V+WNSMI GY Q+GL AID+F +M + ++P +T +S+ + + EGK
Sbjct: 248 VVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHA 307
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ L + S +++ + GL+E+A +M + + V W
Sbjct: 308 IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM-LEKDVVTW 352
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 205/364 (56%), Gaps = 18/364 (4%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G L ++ GF +YV S+L+ +Y+KC I DA + F+++ ++V WTA+++ Q
Sbjct: 340 GKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQ 399
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ + L LY M + P+ T S L AC G AL G+ H Q ++ G V
Sbjct: 400 NGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPV 459
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
++L +MY KCGN+E+ + VF + +D+++WNS+I+G++Q+G A+DLFEEM +
Sbjct: 460 GSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGT 519
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEAR 392
PD ITF+ ++ +C H GLV+ G YF M K +GL P LDHY+C+VD+L RAG+L+EA+
Sbjct: 520 IPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAK 579
Query: 393 DFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVR 435
DFI+ + I +W A E + L ++ ++ L+N+YA R
Sbjct: 580 DFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQR 639
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W+ RVR LM+ +G+ +PGCSW+E+ + V+ F ++ + I L L MK
Sbjct: 640 KWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMK 699
Query: 496 TLGY 499
GY
Sbjct: 700 DEGY 703
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 139/266 (52%), Gaps = 1/266 (0%)
Query: 135 ASFLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+ F++TAV S S + G L ++ G + V V +SL+T+Y+K + A+ VF
Sbjct: 219 SEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVF 278
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
E RN ++W+A+I +AQ + D + ++ M + P +FTF +L+A + GAL
Sbjct: 279 ESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALA 338
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ AH +++GF I V ++L+ MY KCG + +A F+ ++ DIV W +M++G+
Sbjct: 339 VGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHV 398
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q+G A+ L+ M K+ + P T + +C +E GK + K+GL
Sbjct: 399 QNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 458
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMP 399
S + + + G LE+ +++P
Sbjct: 459 VGSALSTMYSKCGNLEDGMSVFRRIP 484
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 144/267 (53%), Gaps = 6/267 (2%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
++NVYV +SL+ +Y K ++ DA ++F+ MP RN SW+ ++A +A E + +L+R+
Sbjct: 150 VSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRL 209
Query: 227 M-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M E ++F T++LSA + L G H ++ G ++ V NSL++MY K G
Sbjct: 210 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAG 269
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
+ A +VF + ++ ++W++MI GYAQ+G A A+ +F +M P TF+GV++
Sbjct: 270 CMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLN 329
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
+ G + GK M K G + ++ S +VD+ + G + +A++ Q+ + V
Sbjct: 330 ASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL-YEVDIV 388
Query: 406 IWEAAESRLLLEPECAATHVQLANLYA 432
+W A S + E H + LYA
Sbjct: 389 LWTAMVSGHVQNGE----HEEALTLYA 411
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKC--RVIIDAYKVFEEMP--VRNVVSWTAI 207
R G A+++G ++ V +SLI YS ++ A+ VF+++P R+V SW ++
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM-G 266
+ ++ +D M+ +S + P+ +F + +A + + G +AH ++
Sbjct: 89 LNPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
S + V SL++MYCK G V +A +F+ M ++ SW++M+AGYA + A DLF
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208
Query: 327 EMMKQ 331
M+++
Sbjct: 209 LMLEE 213
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 105 FDQLLDTPVVDVEKLISMH--HDLHRERLKVDA-----------SFLSTAVTSCGSTRNI 151
FDQL + +V ++S H + H E L + A S +++ + +C +
Sbjct: 379 FDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAAL 438
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
G ++ G VGS+L T+YSKC + D VF +P R+V++W +II+ F
Sbjct: 439 EPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGF 498
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+Q + L+L+ M+ P++ TF +IL AC+ G + +G
Sbjct: 499 SQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRG 542
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 204/347 (58%), Gaps = 18/347 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++L T+YS+ I A +F+E +++ SW A+I+ +AQ + + L++ M+ +
Sbjct: 347 TALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVR 406
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN T TSILSAC GAL G+ H R F S I V+ +LI MY KCG++ EA +
Sbjct: 407 PNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRL 466
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M K+ V+WN+MI+GY HG A++LF EM+ RV P +TFL V+ +C H GLV
Sbjct: 467 FSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLV 526
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--- 409
EG F SM HG +P +HY+C+VDLLGRAG L++A DFI++MP+ P +W A
Sbjct: 527 REGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLG 586
Query: 410 -------------AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A +L L+P+ +V L+N+Y+ + + +AA VR ++K + L
Sbjct: 587 ACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKT 646
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PGC+ IE+ N ++ F + D+S+ + + I +L+ L +M+ G+ E
Sbjct: 647 PGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTE 693
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 150/293 (51%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ I + D+ + + D++ ++ + +++ G QCLA++ GF ++ YV + L
Sbjct: 189 DEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGL 248
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
LYSKC I A +F ++ ++VS+ A+I+ + + + + L++ + S + N
Sbjct: 249 ACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNS 308
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+ ++ G L R H + G S V+ +L ++Y + +E A +F+
Sbjct: 309 SSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDE 368
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
K + SWN+MI+GYAQ+GL +AI LF+EM K V+P+ +T ++S+C G + G
Sbjct: 369 SSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLG 428
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K D + + + + + ++D+ + G + EA+ MP NAV W A
Sbjct: 429 KWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNA 480
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 94/184 (51%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
+I GF ++++VGS+++ Y K + A KVF+ M R+ V W +++ + D
Sbjct: 132 SIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEA 191
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+ ++ M + + T ++L L G C +++GF S+ V L +
Sbjct: 192 ILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACL 251
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KCG +E A +F + D+VS+N+MI+GY + ++ LF+E++ K ++ +
Sbjct: 252 YSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSI 311
Query: 341 LGVI 344
+G+I
Sbjct: 312 VGLI 315
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 9/224 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK IS+ ++ + ++ + +++ +++C + G L R F +N++V ++L
Sbjct: 391 EKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTAL 450
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC I +A ++F MP +N V+W A+I+ + L L+ M +S + P
Sbjct: 451 IDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTG 510
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF S+L AC+ +G + +G + GF + ++ + + GN+++A+
Sbjct: 511 VTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIR 570
Query: 296 NM---HGKDIVSWNSMIAGYAQH---GLAVRAIDLFEEMMKQRV 333
M G + W +++ H LA A D E+ Q V
Sbjct: 571 KMPVEPGPPV--WGALLGACMIHKDANLARLASDKLFELDPQNV 612
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM-LEPNDFTF 239
S + I A +F +P ++ + +I AF+ + LY +R S LEP++FT+
Sbjct: 53 SHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTY 112
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
++S + +LG G H +I GF S + V +++++ Y K V A VF+ M
Sbjct: 113 AFVISGAS---SLGLGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLE 169
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
+D V WN+M++G ++ AI +F +M+K + D+ T V+
Sbjct: 170 RDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVL 214
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 214/387 (55%), Gaps = 19/387 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D S L+ A+ +CG + G L +R G +NV V ++LIT+Y KC+ A +VF
Sbjct: 428 DVSVLA-ALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVF 486
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+E+ + VSW A+I Q + + L+ M+ ++P+ FT SI+ A
Sbjct: 487 DELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPL 546
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
Q R H +IR+ + V +LI MY KCG V A +FN+ + +++WN+MI GY
Sbjct: 547 QARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYG 606
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPEL 372
HG A++LFEEM P+ TFL V+S+C H GLV+EG+ YF SM + +GL+P +
Sbjct: 607 SHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGM 666
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLL 415
+HY +VDLLGRAG L EA FI++MP+ P ++ E+A+
Sbjct: 667 EHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFE 726
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
LEPE HV LAN+YA W ARVR M+ KGL+ PG S +++ N ++ F +
Sbjct: 727 LEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGST 786
Query: 476 SNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ + +I L L++++K +GYVP+
Sbjct: 787 NHQQAKDIYARLAKLIEEIKAVGYVPD 813
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 136/258 (52%), Gaps = 3/258 (1%)
Query: 153 GGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA 212
G A + LA R G ++L +Y+KCR DA +VF+ MP R+ V+W A++A +A
Sbjct: 244 GRAVHAQLAAR-GLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYA 302
Query: 213 QEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
+ + + + RM P+ T S+L AC + ALG R H +R GF +
Sbjct: 303 RNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQV 362
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
V+ +++ +YCKCG V+ A VF+ M ++ VSWN+MI GYA++G A A+ LF+ M+ +
Sbjct: 363 NVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGE 422
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
V ++ L + +C G ++EG+ + + + GL+ ++ + ++ + + + A
Sbjct: 423 GVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLA 482
Query: 392 RDFIKQMPIYPNAVIWEA 409
++ Y V W A
Sbjct: 483 AQVFDELG-YKTRVSWNA 499
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 114/215 (53%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
+ DA L + + +C + + A+R GF V V ++++ +Y KC + A K
Sbjct: 324 RPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARK 383
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+ M RN VSW A+I +A+ L L++ M ++ D + + L AC G
Sbjct: 384 VFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGF 443
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L +GR H +R+G S + V N+LI+MYCKC + A VF+ + K VSWN+MI G
Sbjct: 444 LDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILG 503
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
Q+G + A+ LF M + VKPD+ T + +I +
Sbjct: 504 CTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPA 538
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TFTS+L C L GR+ H Q G A +L +MY KC +A VF+ M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHGGLVEEG 356
+D V+WN+++AGYA++GLA A+ + M ++ +PDA+T + V+ +C +
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + G +++ + ++D+ + G ++ AR M N+V W A
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDR-NSVSWNA 398
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/364 (37%), Positives = 208/364 (57%), Gaps = 24/364 (6%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
I +V +S+IT Y+K + DA VF +M +NVV+W +IA +A + + L L+
Sbjct: 312 IRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVR 371
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF------SYIQVANSLISM 280
++ + P +T+ ++L+AC L G+ AH ++ GF S + V NSL+ M
Sbjct: 372 LKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDM 431
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G++ + VF M +D VSWN+MI GYAQ+G A A+ LFE M+ +PD++T
Sbjct: 432 YLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTM 491
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+GV+S+C H GLV+EG+ YF SM + HG+ P DHY+C++DLLGRAG L+E + I+ MP
Sbjct: 492 IGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMP 551
Query: 400 IYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAAR 442
+ P+AV+W E A +L L+P+ + +V L+N+YA + W R
Sbjct: 552 MEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFR 611
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
VR+ MK +G+ PGCSWIEI V F A D + +EI L + QM + E
Sbjct: 612 VRRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLRIIQMQMSRMSIDAE 671
Query: 503 VHEE 506
+ ++
Sbjct: 672 IADD 675
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 160/323 (49%), Gaps = 41/323 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+H + ++A ++A+++C S + R G L ++ ++VY+G++L+ +Y+KC
Sbjct: 138 MHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCER 197
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILS 244
+A KVF+ MP RN+VSW ++I + Q VD L L+ RMM++ + P++ T S++S
Sbjct: 198 PEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFV-PDEVTLASVMS 256
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQV-ANSLISMYCKCG------------------ 285
AC G A +GR H + ++ F V N+L+ MY KCG
Sbjct: 257 ACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVV 316
Query: 286 -------------NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
NV +A VF M K++V+WN +IA YA + A+ LF + ++
Sbjct: 317 SETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRES 376
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK----PELDHY--SCVVDLLGRAG 386
V P T+ V+++C + ++ G+ + K G + PE D + + +VD+ + G
Sbjct: 377 VWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTG 436
Query: 387 LLEEARDFIKQMPIYPNAVIWEA 409
+ + ++M N V W A
Sbjct: 437 SISDGAKVFERMAARDN-VSWNA 458
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 166 FIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
F ++ ++L++ Y++ + DA +VF+ MP RN S+ A+++A A+ + D L L+
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 226 MMRN--------------------------SMLEPNDF-----TFTSILSACTGSGALGQ 254
+ + + + +DF +F S LSAC A
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G H + S + + +L+ MY KC EEA VF+ M ++IVSWNS+I Y Q
Sbjct: 166 GEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQ 225
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG-LKPELD 373
+G A+ LF MMK PD +T V+S+C EG+ M K + ++
Sbjct: 226 NGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMV 285
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ +VD+ + G EA+ +M I
Sbjct: 286 LNNALVDMYAKCGRTWEAKCVFDRMAI 312
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 208/356 (58%), Gaps = 19/356 (5%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAIIAAFAQEWQVDMCLELYR 225
+ V +++IT Y K + + A +F++M V +N+V+W A+I+ + + + + L+L+R
Sbjct: 214 VRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M + PN +S L C+ AL GR H + + + SLISMYCKCG
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
+ +A +F M KD+V+WN+MI+GYAQHG A +A+ LF EM+ +++PD ITF+ V+
Sbjct: 334 ELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLL 393
Query: 346 SCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C H GLV G YF+SM + + ++P+ DHY+C+VDLLGRAG LEEA I+ MP P+A
Sbjct: 394 ACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHA 453
Query: 405 VIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
++ AAE L L + AA +VQLAN+YA W+ ARVRK M
Sbjct: 454 AVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRM 513
Query: 448 KDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
K+ + PG SWIEI N V+ FR+ D+ + L I L L +MK GY PE+
Sbjct: 514 KESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPEL 569
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 94/171 (54%), Gaps = 3/171 (1%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E ++ ++S LS+A+ C ++ G + ++ +V +SLI++Y KC + D
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A+K+FE M ++VV+W A+I+ +AQ D L L+R M ++ + P+ TF ++L AC
Sbjct: 338 AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH 397
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVAN--SLISMYCKCGNVEEAVYVFNNM 297
+G + G A+ +++ + Q + ++ + + G +EEA+ + +M
Sbjct: 398 AGLVNIG-MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 105/222 (47%), Gaps = 10/222 (4%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A F+ MP ++ SW +I +A+ +++ EL+ SM+E N+ ++ +++S
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY----SMMEKNEVSWNAMISGYIE 198
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNS 307
G L + ++ + ++I+ Y K VE A +F +M K++V+WN+
Sbjct: 199 CGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNA 254
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI+GY ++ + LF M+++ ++P++ + C ++ G+ ++K
Sbjct: 255 MISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKST 314
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L ++ + ++ + + G L +A + M + V W A
Sbjct: 315 LCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNA 355
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 35/213 (16%)
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS- 244
I A +VF M +N ++W +++ +++ +E +++ + + EP+ F++ +LS
Sbjct: 77 IDGALRVFHGMRAKNTITWNSLLIGISKD--PSRMMEAHQLF-DEIPEPDTFSYNIMLSC 133
Query: 245 ----------------------ACTGSGALGQGRSAHCQTIRMGFFSYIQVA----NSLI 278
A + G R + R F+S ++ N++I
Sbjct: 134 YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMI 193
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDA 337
S Y +CG++E+A + F + +V+W +MI GY + + ++L E M K V +
Sbjct: 194 SGYIECGDLEKASHFFKVAPVRGVVAWTAMITGY----MKAKKVELAEAMFKDMTVNKNL 249
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
+T+ +IS E+G F +M + G++P
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA-LGQGRSAHCQTIRM 265
IIA + +D L ++ MR N T+ S+L + + + + +
Sbjct: 67 IIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEIPEP 122
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
FSY N ++S Y + N E+A F+ M KD SWN+MI GYA+ G +A +LF
Sbjct: 123 DTFSY----NIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
MM++ + +++ +IS G +E+ +F G+ ++ ++ +A
Sbjct: 179 YSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVA----WTAMITGYMKA 230
Query: 386 GLLEEARDFIKQMPIYPNAVIWEA 409
+E A K M + N V W A
Sbjct: 231 KKVELAEAMFKDMTVNKNLVTWNA 254
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH-GLAVRAIDLFEEMMKQRV 333
N +I+ + G+++ A+ VF+ M K+ ++WNS++ G ++ + A LF+E+
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI----P 120
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGRAGLLEEA 391
+PD ++ ++S E+ + +FD M P D ++ ++ R G +E+A
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRM------PFKDAASWNTMITGYARRGEMEKA 174
Query: 392 RDFIKQMPIYPNAVIWEAAESRLLLEPECA----ATHVQLANLYAGVRCWDQAARVRKLM 447
R+ M + N V W A S + EC A+H GV W A + M
Sbjct: 175 RELFYSM-MEKNEVSWNAMISGYI---ECGDLEKASHFFKVAPVRGVVAW--TAMITGYM 228
Query: 448 KDKGLK 453
K K ++
Sbjct: 229 KAKKVE 234
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 217/405 (53%), Gaps = 19/405 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ +S+ ++H D L + + R++ G AI+ G ++ V SSL
Sbjct: 73 EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSL 132
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+Y + + D V MPVRN+V+W +I AQ + L LY+MM+ S PN
Sbjct: 133 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 192
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF ++LS+C+ GQG+ H + I++G S + V +SLISMY KCG + +A F+
Sbjct: 193 ITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE 252
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEE 355
+D V W+SMI+ Y HG AI LF M +Q ++ + + FL ++ +C H GL ++
Sbjct: 253 REDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDK 312
Query: 356 GKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESR- 413
G FD M K+G KP L HY+CVVDLLGRAG L++A IK MPI P+ VIW+ S
Sbjct: 313 GLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSAC 372
Query: 414 ----------------LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
L ++P +A +V LAN++A + W + VRK M+DK +K G
Sbjct: 373 NIHKNAEMAQKVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAG 432
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SW E V++F+ D+S ++ EI L L +MK GY P+
Sbjct: 433 ISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPD 477
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI Y + ++ A KVF+EMP R + +W A+IA Q + L L+R M P+
Sbjct: 31 LINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPD 90
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++T S+ S G ++ G+ H I+ G + V +SL MY + G +++ V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+M +++V+WN++I G AQ+G + L++ M +P+ ITF+ V+SSC + +
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
G+ K G + S ++ + + G L +A
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDA 246
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+N LI+ Y + G++ A VF+ M + + +WN+MIAG Q + LF EM
Sbjct: 28 SNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGF 87
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
PD T V S V G+ K+GL+ +L S + + R G L++
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 394 FIKQMPIYPNAVIW 407
I+ MP+ N V W
Sbjct: 148 VIRSMPV-RNLVAW 160
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+SMY K G++ AV ++ M K+ +S N +I GY + G V A +F+EM +++
Sbjct: 1 MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKL---- 56
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
T+ +I+ EEG F M HGL D Y+ G AGL
Sbjct: 57 TTWNAMIAGLIQFEYNEEGLSLFREM--HGLGFSPDEYTLGSVFSGSAGL 104
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 211/390 (54%), Gaps = 17/390 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E + D + + +C + R G +A++ G + YV +LI +Y++C
Sbjct: 136 EGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARA 195
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F + VVS+ A+I A + + L L+R M+ L+ T S+LSAC
Sbjct: 196 ARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACAL 255
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
GAL GR H ++ S ++V +LI MY KCG++E+A+ VF M +D +W+ M
Sbjct: 256 LGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVM 315
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I YA H AI LFEEM KQ +KPD +TFLGV+ +C H GLV EG YFDSM + GL
Sbjct: 316 IVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGL 375
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----AAESR----------- 413
P + HY CV DLL R+G L+ A +FI ++PI P A++W A SR
Sbjct: 376 VPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFE 435
Query: 414 --LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFR 471
L L+ +V +NL A W++ RVRKLM +KG+ PGCS IE+ N V+ F
Sbjct: 436 RILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFF 495
Query: 472 AEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
A D + + + ++D +++Q+K GYVP
Sbjct: 496 AGDGRHPKSLDARRMVDGVIEQLKLAGYVP 525
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM-----YCKCGNVEEAVYVFNNM 297
L CT AL Q H ++ G ++ L+++ K + A VF+ +
Sbjct: 38 LPQCTTLRALAQ---LHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRI 94
Query: 298 HGK-DIVSWNSMIAGYAQ-------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
G D+V +N+++ GYA+ A A +F M+++ V PD TF+ ++ +C
Sbjct: 95 PGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAA 154
Query: 350 GGLVEEGK 357
EEG+
Sbjct: 155 ARAGEEGR 162
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 230/411 (55%), Gaps = 20/411 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ ++ + + D+ + ++ D S + T V++C + +I G GF +N+ + +
Sbjct: 246 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVN 305
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+LI LYSKC + A +FE +P ++V+SW +I + L L++ M S P
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVY 292
ND T SIL AC GA+ GR H + G + + SLI MY KCG++E A
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VFN++ K + SWN+MI G+A HG A + DLF M K ++PD ITF+G++S+C H G+
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---- 407
++ G+ F +M + + + P+L+HY C++DLLG +GL +EA + I M + P+ VIW
Sbjct: 486 LDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLL 545
Query: 408 -------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
AE+ + +EPE ++V L+N+YA W++ A+ R L+ DKG+K
Sbjct: 546 KACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK 605
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
PGCS IEI +VV+ F DK + R EI +L+ + ++ G+VP+ E
Sbjct: 606 VPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 146/285 (51%), Gaps = 35/285 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE------- 194
+ SC ++ + G ++ G ++YV +SLI++Y + + DA+KVF+
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 195 ------------------------EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
E+PV++VVSW A+I+ +A+ LEL++ M +
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ P++ T +++SAC SG++ GR H GF S +++ N+LI +Y KCG +E A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F + KD++SWN++I GY L A+ LF+EM++ P+ +T L ++ +C H
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 351 GLVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G ++ G+ VY D K G+ + ++D+ + G +E A
Sbjct: 381 GAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAH 424
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 32/250 (12%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF+ + N++ W + A L+LY M + L PN +TF +L +C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
S A +G+ H +++G + V SLISMY + G +E+A VF+ +D+VS+ ++
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 309 IAGYAQHG-----------LAVR--------------------AIDLFEEMMKQRVKPDA 337
I GYA G + V+ A++LF++MMK V+PD
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
T + V+S+C G +E G+ + HG L + ++DL + G LE A ++
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 398 MPIYPNAVIW 407
+P Y + + W
Sbjct: 327 LP-YKDVISW 335
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE---AVYVFNNMHGKDIVSWNSMIAGY 312
R H Q I++G + + LI + E A+ VF + +++ WN+M G+
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
A V A+ L+ M+ + P++ TF V+ SC +EG+ + K G +L
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMP 399
++ ++ + + G LE+A + P
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSP 196
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 202/344 (58%), Gaps = 15/344 (4%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF +M R+VV+W ++I + + + L +R M NS +EP+ FTF S+++ C
Sbjct: 107 AKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCAR 166
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
G+ H I ++++LI +Y KCG + A VFN++ D+ WNSM
Sbjct: 167 LGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSM 226
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-G 367
I G A HGLA+ AI +F +M + V PD+ITF+G++++C H GLVE+G+ YFD M +H
Sbjct: 227 INGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYS 286
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES--RLLLEPEC----- 420
++P+L+HY +VDLLGRAGL+EEA IK MP+ P+ VIW A S R PE
Sbjct: 287 IQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAI 346
Query: 421 -------AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
+ ++ L+N+Y + WD A RVR++MK G++ N G SW+E+ V+++F+A
Sbjct: 347 AKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAG 406
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
D+S+ I VL+ L+ + K G++P +D + +R E
Sbjct: 407 DRSHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREE 450
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 34/201 (16%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC----------------- 284
IL AC S +H + I+ G+ +Y + SL+S Y C
Sbjct: 26 ILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWG 85
Query: 285 ----------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
G + A VF M +D+V+WNSMI G ++ A+ F EM
Sbjct: 86 FDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREM 145
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
+ V+PD TF VI+ C G ++ M + ++ S ++DL + G +
Sbjct: 146 LNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRI 205
Query: 389 EEARDFIKQMPIYPNAVIWEA 409
A+ + + + +W +
Sbjct: 206 NTAKKVFNSIQ-HDDVSVWNS 225
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 4/198 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++ ++ D ++ + C + L I N + S+L
Sbjct: 136 EEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSAL 195
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I LYSKC I A KVF + +V W ++I A + ++ M + P+
Sbjct: 196 IDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDS 255
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN--SLISMYCKCGNVEEAVYVF 294
TF IL+AC+ G + QGR + +R + Q+ + +++ + + G VEEA +
Sbjct: 256 ITFIGILTACSHCGLVEQGRR-YFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMI 314
Query: 295 NNMHGK-DIVSWNSMIAG 311
M + DIV W ++++
Sbjct: 315 KAMPMEPDIVIWRALLSA 332
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/408 (33%), Positives = 221/408 (54%), Gaps = 50/408 (12%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E +++ H + + D + A+ SCGS + G ++TG ++++ ++L
Sbjct: 90 EAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTL 149
Query: 177 ITLYSKCRVIIDAY--------------------------------KVFEEMPVRNVVSW 204
I LY+ C I DA +VF E PV+NVVSW
Sbjct: 150 IHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFGETPVKNVVSW 209
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
A+I ++ + L L+ M+++ ++P++ T S+LSAC GAL QG H +
Sbjct: 210 NAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDK 269
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G VA +L+ MY KCG++E+A+ VFN+ KDI +WNS+I+G + HG A+ +
Sbjct: 270 NGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQI 329
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLG 383
F EM+ + KP+ +TF+ V+S+C GL++EG+ F+ M HG++P ++HY C+VDLLG
Sbjct: 330 FSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLG 389
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQ 426
R GLLEEA + +++MP +V+WE+ A+ L L P+ +++ VQ
Sbjct: 390 RVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQ 449
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
L+N+YA + W VR+ M+ +G++ +PGCS IE+ VY F A +
Sbjct: 450 LSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAGE 497
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 35/265 (13%)
Query: 162 IRTGFIANVYVGSSLI---TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
+++G I + + S LI + S + I A+ +F +P N W II A+A +
Sbjct: 31 LKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPE 90
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L ++ M ++ + P+ +TFT L +C + +GR H ++ G + + N+LI
Sbjct: 91 AALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLI 150
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA----------------- 321
+Y CG +E+A ++ + M +D+VSWN++++ YA+ GL A
Sbjct: 151 HLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWN 210
Query: 322 ---------------IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
+ LFE+M VKPD T + V+S+C H G + +G+ + K+
Sbjct: 211 AMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKN 270
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEA 391
G+ + + +VD+ + G +E+A
Sbjct: 271 GISIDGFVATALVDMYSKCGSIEKA 295
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY-- 292
+ F ILS + ++ + AH ++ G A+ LI+ + + Y
Sbjct: 3 SSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAH 62
Query: 293 -VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F+ + + WN++I YA A+ +F +M+ V PD TF + SC
Sbjct: 63 SIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFS 122
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
VEEG+ + K GL +L + ++ L G +E+AR + +M + + V W A
Sbjct: 123 GVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERDVVSWNA 179
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 235/414 (56%), Gaps = 24/414 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E I+ +++ R ++ D + + +C +++ G+ AI++G + +V S++
Sbjct: 421 EDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTV 480
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC +I +A K+ + + + +VSW +II+ F+ Q + + + M + ++P+
Sbjct: 481 VDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDH 540
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT+ ++L C + G+ H Q I+ ++++L+ MY KCGN+ +++ +F
Sbjct: 541 FTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEK 600
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
D VSWN+MI GYA HG A+++FE M + V P+ TF+ V+ +C H GL+++G
Sbjct: 601 AQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDG 660
Query: 357 KVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
YF M +++ L+P+L+H++C+VD+LGR+ +EA FI+ MP+ +AVIW+
Sbjct: 661 CRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICK 720
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AA + L L+P+ ++ ++ L+N+YA W +R R+LM+ LK PGC
Sbjct: 721 IRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGC 780
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP------EVHEE 506
SWIE+ + ++ F A DK + R E+ +L+ L+ +MK GY P EV EE
Sbjct: 781 SWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYEPASALFAEVDEE 834
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 146/262 (55%), Gaps = 2/262 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ R + D LS ++C + G CLAI++GF +V V ++++ LY KC+
Sbjct: 329 MTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKA 388
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+++AY VF+EM R+ VSW AIIAA Q E D L M+R M EP+DFT+ S+L
Sbjct: 389 LVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGM-EPDDFTYGSVLK 447
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
AC G +L G H + I+ G V+++++ MYCKCG + EA + + + G+++VS
Sbjct: 448 ACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVS 507
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WNS+I+G++ + + A F EM+ VKPD T+ V+ +C + +E GK +
Sbjct: 508 WNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQII 567
Query: 365 KHGLKPELDHYSCVVDLLGRAG 386
K + + S +VD+ + G
Sbjct: 568 KQEMLGDEYISSTLVDMYAKCG 589
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 33/364 (9%)
Query: 68 HLRLIQDFLQTDSKHLDSQKFNHDFTG---TNSTFGSSNVFDQLLDTPVVDVEKLIS--- 121
H R + D + H D+ +N T T ++++F + D VV L+S
Sbjct: 57 HARGVFDVM----PHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYC 112
Query: 122 ----------MHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVY 171
+ ++ R + D + L+ + +CG ++ G +A++TG +V
Sbjct: 113 QRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVR 172
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
GS+L+ +Y KCR + DA + F M RN VSW A IA Q Q LEL+ M+
Sbjct: 173 AGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLG 232
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
L + + S+ +C L R H I+ F + V +++ +Y K ++ +A
Sbjct: 233 LGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDAR 292
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
F ++ + + N+M+ G + GL A+ LF+ M + + D ++ GV S+C
Sbjct: 293 RAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSAC---- 348
Query: 352 LVEEGKVYFDSMAKH--GLKPELDHYSCV----VDLLGRAGLLEEARDFIKQMPIYPNAV 405
E K Y + H +K D CV +DL G+ L EA ++M ++V
Sbjct: 349 --AEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME-QRDSV 405
Query: 406 IWEA 409
W A
Sbjct: 406 SWNA 409
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ R L V ++ SC + + AI+ F A+ VG++++ +Y+K
Sbjct: 228 MQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADS 287
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
++DA + F +P V + A++ + L+L++ M S + + + + + SA
Sbjct: 288 LVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSA 347
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C QG HC I+ GF + V N+++ +Y KC + EA VF M +D VSW
Sbjct: 348 CAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSW 407
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N++IA Q+ I EM++ ++PD T+ V+ +C +E G V K
Sbjct: 408 NAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIK 467
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEAR 392
GL + S VVD+ + G++ EA+
Sbjct: 468 SGLGLDAFVSSTVVDMYCKCGMITEAQ 494
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 31/267 (11%)
Query: 164 TGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLEL 223
+GF+ +V + L+ +Y++C A VF+ MP R+ VSW ++ A+A L
Sbjct: 33 SGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHAGDTGAAASL 92
Query: 224 Y---------------------RMMRNSM----------LEPNDFTFTSILSACTGSGAL 252
+ M R+S+ + P+ T +L AC G L
Sbjct: 93 FGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDL 152
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
G H ++ G ++ ++L+ MY KC ++E+A+ F+ M ++ VSW + IAG
Sbjct: 153 ALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGC 212
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+ R ++LF +M + + + V SC + + K+ +
Sbjct: 213 VQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADR 272
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ +VD+ +A L +AR +P
Sbjct: 273 VVGTAIVDVYAKADSLVDARRAFFSLP 299
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 38/208 (18%)
Query: 238 TFTSILSACTGSG--ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF+ + C G+G AL G++AH + + GF V+N L+ MY +CG A VF+
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 296 NMHGKDIVSWNSM-------------------------------IAGYAQHGLAVRAIDL 324
M +D VSWN+M ++GY Q G+ ++ L
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEG-KVYFDSMA-KHGLKPELDHYSCVVDLL 382
EM ++ V PD T ++ +C GGL + V ++A K GL+ ++ S +VD+
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKAC--GGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMY 181
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEAA 410
G+ LE+A F M N+V W AA
Sbjct: 182 GKCRSLEDALRFFHGMG-ERNSVSWGAA 208
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 235/431 (54%), Gaps = 33/431 (7%)
Query: 104 VFDQLLDTPVVDVEKLISMH-------------HDLHRERLKVDASFLSTAVTSCGSTRN 150
+FD++ D VV +I+ H ++ E + +D +S+ + +C +
Sbjct: 440 IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 499
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
I IR G ++++ + + ++ +Y +C + A ++FE + ++VVSWT++I+
Sbjct: 500 ISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISC 558
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ + LEL+ +M+ + +EP+ + SILSA AL +G+ H IR GF
Sbjct: 559 YVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLE 618
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+A++L+ MY +CG +E++ VFN + KD+V W SMI Y HG AIDLF M
Sbjct: 619 GSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMED 678
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLE 389
+ + PD I F+ V+ +C H GL+ EG+ + +SM ++ L+P +HY+C+VDLLGRA LE
Sbjct: 679 ESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLE 738
Query: 390 EARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYA 432
EA F+K M + P A +W E A +LL ++PE +V ++N+Y+
Sbjct: 739 EAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYS 798
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
R W VR MK GLK NPGCSWIE+ N V+ F A DKS+ + EI L + +
Sbjct: 799 AERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITE 858
Query: 493 QM-KTLGYVPE 502
++ K GYV +
Sbjct: 859 KLAKEGGYVAQ 869
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 203/410 (49%), Gaps = 30/410 (7%)
Query: 7 QTCRKKKPCSALQSLKTLSIIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTE 66
+ C++ A QSL L F +Q Q S ++ VL++ + S +
Sbjct: 49 EICKRGSVNEAFQSLTDL------FANQSPSQFSLDEAYSS---VLELCGSKKALSEGQQ 99
Query: 67 VHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFD-----------QLLDTPVVD 115
VH +I +S L S + + + +FD ++ V +
Sbjct: 100 VHAHMITSNALFNSVFL-STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTN 158
Query: 116 VEKLISMHHDLHRER----LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVY 171
E L S+ +L+RE + +DA + +CG ++ R GA LAI+ G+++ V+
Sbjct: 159 GEPLGSL--ELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVF 216
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
V +S++ +Y+KC + A ++F+ MP + +VVSW ++I+A++ Q L L+ M+ +
Sbjct: 217 VANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKA 276
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
L PN +TF + L AC S + QG H ++ ++ + VAN+LI+MY + G + EA
Sbjct: 277 SLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEA 336
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI-SSCRH 349
+F NM D +SWNSM++G+ Q+GL A+ + EM KPD + + +I +S R
Sbjct: 337 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARS 396
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G + +++ +M K+GL +L + +VD+ + ++ +MP
Sbjct: 397 GNTLHGMQIHAYAM-KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 445
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 176/378 (46%), Gaps = 33/378 (8%)
Query: 92 FTGTNSTFGSSNVFDQLLDTP-VVDVEKLISMHH-------------DLHRERLKVDASF 137
+T N G+ +FD++ + VV +IS + ++ + L +
Sbjct: 225 YTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYT 284
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
A+ +C + I+ G +++ + NV+V ++LI +Y++ + +A +F M
Sbjct: 285 FVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMD 344
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ +SW ++++ F Q L+ Y MR++ +P+ SI++A SG G
Sbjct: 345 DWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQ 404
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++ G S +QV NSL+ MY K +++ +F+ M KD+VSW ++IAG+AQ+G
Sbjct: 405 IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGS 464
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
RA++LF E+ + + D + ++ +C L+ K + + GL +L +
Sbjct: 465 HSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNG 523
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCW 437
+VD+ G G ++ A + + + + V W + S H LAN
Sbjct: 524 IVDVYGECGNVDYAARMFELIE-FKDVVSWTSMIS--------CYVHNGLAN-------- 566
Query: 438 DQAARVRKLMKDKGLKTN 455
+A + LMK+ G++ +
Sbjct: 567 -EALELFHLMKETGVEPD 583
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 232/493 (47%), Gaps = 92/493 (18%)
Query: 110 DTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN 169
DTP ++ + M +FL A +C R + G CLA+ G ++
Sbjct: 84 DTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANC---RALTNGLQLHCLAVGYGLDSH 140
Query: 170 VYVGSSLITLYS-------------------------------KCRVIIDAYKVFEEMPV 198
++VG++LI++Y+ +C + DA +VF MP+
Sbjct: 141 LFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPI 200
Query: 199 RNV-------------------------------VSWTAIIAAFAQEWQVDMCLELYRMM 227
RN+ VSW+ +I FA + +R +
Sbjct: 201 RNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREV 260
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
R + PN+ + T +LSAC +GA GR H + GF I V N+LI Y KCGN+
Sbjct: 261 RREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNL 320
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ A VF+NM + VSW +MIAG A HG AI LF EM + +KPD+ITF+ ++ +C
Sbjct: 321 DMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYAC 380
Query: 348 RHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
H GLV+ G YF M +G++P ++HY C+VDL GRAG L++A DF+ QMPI PN ++
Sbjct: 381 SHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIV 440
Query: 407 WE---------------AAESRLL--LEPECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
W R L L+PE + HV L+N+YA W A +R+ M
Sbjct: 441 WRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTH 500
Query: 450 KGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL-GYVPEVH---- 504
+ LK PG S IE+ ++Y F A +K N E L ++ +++ GYVPEV
Sbjct: 501 QRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLH 560
Query: 505 ----EEKVDDASH 513
EEK D S
Sbjct: 561 DIEVEEKEDSVSQ 573
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 112/284 (39%), Gaps = 64/284 (22%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACT 247
A ++F ++ +V + +I + L+L+ M R S+ P+ F+F +L A
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG---------------------- 285
AL G HC + G S++ V +LISMY +C
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNA 177
Query: 286 ---------NVEEAVYVFNNMHGKDIVSWNSMIAGY------------------------ 312
V++A VF M +++ SWN M+AGY
Sbjct: 178 IVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSW 237
Query: 313 -------AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
A +G A F E+ ++ ++P+ ++ GV+S+C G E G++ + K
Sbjct: 238 STMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEK 297
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G + + ++D + G L+ AR M + +AV W A
Sbjct: 298 SGFLQIISVNNALIDTYSKCGNLDMARLVFDNM-LRRSAVSWTA 340
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 204/366 (55%), Gaps = 49/366 (13%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEM-------------------------------PVRNVV 202
++LI +Y+KC ++DA+ +F+EM P R +V
Sbjct: 134 NALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTIV 193
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SWTAII+ + + L+++R M+ + +EP++ + S+L AC GAL G+ H
Sbjct: 194 SWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFC 253
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
R G + N+LI MY KCG +++A +F+ M G+D++SW++MI G A HG AI
Sbjct: 254 ARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHGKVREAI 313
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDL 381
+FE M + +KP+ ITF+G++S+C H G EEG +YFD+M K ++PE++HY +VDL
Sbjct: 314 AIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDL 373
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATH 424
LGRAG L +A D +++MP+ P++ IW A E LEP+ +
Sbjct: 374 LGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNY 433
Query: 425 VQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEIL 484
V L+N+YA + WD +R+RKL++ K +K PGCS IE+ NV F + D S EI
Sbjct: 434 VLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQEFVSGDDSKPYSKEIF 493
Query: 485 PVLDFL 490
+L+ L
Sbjct: 494 WLLELL 499
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 40/247 (16%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM----RNS-----MLEPNDFTFTSI 242
+F+E+ N + A+I A + ++ Y+ M RNS ++ P++FTF +
Sbjct: 42 LFKEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFV 101
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH---- 298
+ AC G G+ H Q + G S++ N+LI MY KC N+ +A +F+ MH
Sbjct: 102 VKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGA 161
Query: 299 ---------------------------GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
+ IVSW ++I+GY + G + A+D+F EM
Sbjct: 162 ISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIA 221
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
++PD + + V+ +C G +E GK A++GL + ++++ + G +++A
Sbjct: 222 GIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQA 281
Query: 392 RDFIKQM 398
QM
Sbjct: 282 CQLFDQM 288
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 117/244 (47%), Gaps = 20/244 (8%)
Query: 104 VFDQLLDTPVVDVEKLISMHH---------DLHRER----LKVDASFLSTAVTSCGSTRN 150
+FD++ + +V +IS + D+ RE ++ D + + + + +C
Sbjct: 183 LFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGA 242
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G R G + + ++LI +Y+KC I A ++F++M R+V+SW+ +I
Sbjct: 243 LETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGG 302
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF-- 268
A +V + ++ M+ + ++PN TF +LSAC +G +G + T++ F
Sbjct: 303 LANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGL-MYFDTMKKDFHIE 361
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQH---GLAVRAIDL 324
I+ SL+ + + G + +A+ + M K D W S+++ H +AV A++
Sbjct: 362 PEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEH 421
Query: 325 FEEM 328
EE+
Sbjct: 422 LEEL 425
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR---------VKPD 336
+++ A ++F + + +N+MI + + ID +++M+++ + PD
Sbjct: 35 DMDYASFLFKEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPD 94
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
TF V+ +C GL GK K G K L + ++D+ + L +A +
Sbjct: 95 EFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFD 154
Query: 397 QM 398
+M
Sbjct: 155 EM 156
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 200/353 (56%), Gaps = 36/353 (10%)
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
V +++IT Y K + + A +F++M V+ N+V+W A+I+ + + + + L+L+R M
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAML 276
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ PN +S L C+ AL GR H I MYCKCG +
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALCLGRQIH-----------------QIVMYCKCGELG 319
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A +F M KD+V+WN+MI+GYAQHG A +A+ LF EM + KPD ITF+ V+ +C
Sbjct: 320 DAWKLFEAMKKKDVVAWNAMISGYAQHGNAEKALCLFHEMRDSKTKPDWITFVAVLLACN 379
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV+ G YFDSM + + ++P DHY+C+VDLLGRAG +EEA I+ MP P+A ++
Sbjct: 380 HAGLVDIGMTYFDSMVRDYRVEPRPDHYTCMVDLLGRAGKVEEALKLIRSMPFRPHAAVF 439
Query: 408 E-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AAE L L+P AA +VQLAN+YA W+ ARVRK MK+
Sbjct: 440 GTLLGACRVHKNVELAEFAAEKLLELDPRNAAGYVQLANIYASKNLWEDVARVRKRMKES 499
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ PG SWIEI N ++ FR+ D+ + L I L L +MK GY PE+
Sbjct: 500 NVVKVPGYSWIEIRNKIHHFRSSDRIHPELDSIHKKLKELERKMKLAGYKPEL 552
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 87/173 (50%), Gaps = 9/173 (5%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+++ Y + A F MP ++ SW +I +A+ + +E R++ SM+E N
Sbjct: 130 MLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYARRGE----MEKARVLFYSMMEKN 185
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+ ++ +++S G L ++AH + F + ++I+ Y K VE A +F
Sbjct: 186 EVSWNAMISGYIECGDL--EKAAHF--FKAAPFRGVVAWTAMITGYMKAKKVELAEAMFK 241
Query: 296 NMH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+M K++V+WN+MI+GY ++ + LF M+++ ++P++ + C
Sbjct: 242 DMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 46/224 (20%)
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I A VF M +N VSW +++ +++ +E +++ + + EP+ F++
Sbjct: 77 IDGALSVFHGMRAKNTVSWNSLLVGISKD--PSRMMEAHQLF-DEIPEPDTFSY------ 127
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
N ++S Y + GN E+A FN M KD SW
Sbjct: 128 -----------------------------NIMLSCYVRNGNFEKAQSFFNRMPFKDAASW 158
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI GYA+ G +A LF MM++ + +++ +IS G +E+ +F +
Sbjct: 159 NTMITGYARRGEMEKARVLFYSMMEK----NEVSWNAMISGYIECGDLEKAAHFFKAAPF 214
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G+ ++ ++ +A +E A K M + N V W A
Sbjct: 215 RGVVA----WTAMITGYMKAKKVELAEAMFKDMTVKKNLVTWNA 254
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH-GLAVRAIDLFEEMMKQRV 333
N +I+ + G+++ A+ VF+ M K+ VSWNS++ G ++ + A LF+E+
Sbjct: 65 NKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGISKDPSRMMEAHQLFDEI----P 120
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+PD ++ ++S G E+ + +F+ M + ++ ++ R G +E+AR
Sbjct: 121 EPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFK----DAASWNTMITGYARRGEMEKARV 176
Query: 394 FIKQMPIYPNAVIWEAAESRLLLEPECA----ATHVQLANLYAGVRCWDQAARVRKLMKD 449
M + N V W A S + EC A H A + GV W A + MK
Sbjct: 177 LFYSM-MEKNEVSWNAMISGYI---ECGDLEKAAHFFKAAPFRGVVAW--TAMITGYMKA 230
Query: 450 KGLK 453
K ++
Sbjct: 231 KKVE 234
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 215/384 (55%), Gaps = 19/384 (4%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
F++ S G G + C +++TG +V+V +LI +YSKC I DA VF++M
Sbjct: 235 FVTMIRASAGLGLIFAGRQLHSC-SLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQM 293
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P + V W +IIA +A + L +Y MR+S ++ ++FTF+ I+ C +L +
Sbjct: 294 PEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAK 353
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
AH +R GF I +L+ +Y K G +E+A +VF+ M K+++SWN++IAGY HG
Sbjct: 354 QAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHG 413
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHY 375
V A+++FE M+ + + P+ +TFL V+S+C + GL + G F+SM++ H +KP HY
Sbjct: 414 RGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHY 473
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEP 418
+C+++LLGR GLL+EA IK P P +W AAE + P
Sbjct: 474 ACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGP 533
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
E + +V L N+Y ++AA V + +K +GL+ P CSWIEI Y F + DK +
Sbjct: 534 EKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHA 593
Query: 479 RLSEILPVLDFLVDQMKTLGYVPE 502
+ EI LD L+ ++ GYVP+
Sbjct: 594 QSKEIYQKLDELMLEISKHGYVPQ 617
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 1/277 (0%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D+ V++C ++IRG I +G + Y+ + ++ ++ KC ++IDA ++
Sbjct: 129 MDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRL 188
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+EMP +N++SW II L+ MM + F +++ A G G +
Sbjct: 189 FDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLI 248
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
GR H +++ G + VA +LI MY KCG++E+A VF+ M K V WNS+IAGY
Sbjct: 249 FAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGY 308
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
A HG + A+ ++ EM VK D TF +I C +E K + +HG ++
Sbjct: 309 ALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDI 368
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VDL + G +E+A+ MP + N + W A
Sbjct: 369 VANTALVDLYSKWGRIEDAKHVFDMMP-HKNVISWNA 404
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 221 LELYRMMR-NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
LEL+ ++ N + + T+ +++SAC G ++ + I G + N ++
Sbjct: 115 LELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLL 174
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
M+ KCG + +A +F+ M K+I+SWN++I G G A LF M + +
Sbjct: 175 MHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRM 234
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
F+ +I + GL+ G+ K G+ ++ ++D+ + G +E+A+ QMP
Sbjct: 235 FVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMP 294
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 232/427 (54%), Gaps = 33/427 (7%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + +E +KVD + + + +C I C AIR G + ++ V + +I +
Sbjct: 452 LEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDI 510
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y +C + + K+FE + +++V+WT++I +A ++ L L+ M+++ ++P+
Sbjct: 511 YGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVAL 570
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
SIL A G +L +G+ H IR F + +SL+ MY CG++ A+ VFN +
Sbjct: 571 VSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKC 630
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
KD+V W +MI HG +AIDLF+ M++ V PD ++FL ++ +C H LV EGK Y
Sbjct: 631 KDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCY 690
Query: 360 FD-SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
D M+ + L+P +HY+CVVDLLGR+G EEA +FIK MP+ P +V+W
Sbjct: 691 LDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHK 750
Query: 408 -----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
A +RLL LEP+ +V ++N++A + W+ A VR + ++GL+ +P CSWI
Sbjct: 751 NHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWI 810
Query: 462 EIMNVVYRFRAEDKS-------NTRLSEILPVL----DFLVDQMKTLGYVPEVHEEKVDD 510
EI N V+ F D S N +L+EI L + D L V E EEKV D
Sbjct: 811 EIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSE--EEKV-D 867
Query: 511 ASHKRTE 517
H+ +E
Sbjct: 868 VLHRHSE 874
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 2/268 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L++ + + G + R G LA++ G + +V ++LI +Y+KC ++ A +VF
Sbjct: 163 DGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVF 222
Query: 194 EEM-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
E M R+V SW ++I+ Q L+L+R M+ ++L N +T +L CT L
Sbjct: 223 ELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQL 282
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
GR H ++ G IQ N+L+ MY KCG V+ A+ VF + KD +SWNSM++ Y
Sbjct: 283 NLGRELHAALLKSGSEVNIQ-CNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCY 341
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+GL AI+ EM++ +PD + + S+ H G + GK K L +
Sbjct: 342 VQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDT 401
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ ++D+ + +E + +M I
Sbjct: 402 QVGNTLMDMYMKCRYIEYSAHVFDRMRI 429
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 12/230 (5%)
Query: 147 STRNIRGGAPYQCLAIRTGFIA--NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
+ + + G A+ TG + + ++ + L+ +Y KC + DA +F+ M R V SW
Sbjct: 70 AKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSW 129
Query: 205 TAIIAAFAQEWQVDMCLELYRMMR---NSMLEPNDFTFTSILSACTGSGALGQGRSA--- 258
A+I A+ L +YR MR S + P+ T S+L A SG G GR
Sbjct: 130 NALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKA---SGVEGDGRCGCEV 186
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQHGL 317
H ++ G VAN+LI+MY KCG ++ A+ VF MH G+D+ SWNSMI+G Q+G+
Sbjct: 187 HGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGM 246
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
++A+DLF M + + ++ T +GV+ C + G+ ++ K G
Sbjct: 247 FLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG 296
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + R L +++ + C + G +++G N+ ++L+ +
Sbjct: 251 LDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVM 309
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + A +VF E+ ++ +SW ++++ + Q +E M +P+
Sbjct: 310 YTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACI 369
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+ SA G L G+ H I+ S QV N+L+ MY KC +E + +VF+ M
Sbjct: 370 VSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRI 429
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
KD +SW ++I YAQ + A+++F E K+ +K D + ++ +C
Sbjct: 430 KDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEAC 477
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 5/181 (2%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ--VANSLISMYCKCGNVEEAV 291
P + +L A+ QG H + G +A L+ MY KCG V +A
Sbjct: 56 PPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADAR 115
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM---MKQRVKPDAITFLGVISSCR 348
+F+ M + + SWN++I Y G A A+ ++ M V PD T V+ +
Sbjct: 116 LLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASG 175
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
G G KHGL + ++ + + G+L+ A + M + W
Sbjct: 176 VEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWN 235
Query: 409 A 409
+
Sbjct: 236 S 236
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 205/364 (56%), Gaps = 18/364 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++ L E ++ D+ +SC + + GA +++ G ++V VG+S+
Sbjct: 330 EEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSI 389
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ YSKC A + FE + N V W II+ FAQ + + L + MR + + ++
Sbjct: 390 VNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDE 449
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F+ +S++ A + A+ QGR H ++ G I V +++I MY KCG VE+A VF+
Sbjct: 450 FSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSV 509
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M K++VSWNSMI GYAQ+G A+ LF+EM + P A+TF+G++ +C H GLVEEG
Sbjct: 510 MPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEG 569
Query: 357 KVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------- 407
+ +++ M +G+ P ++H +C+VDLLGRAG LEEA F+ IW
Sbjct: 570 RNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACG 629
Query: 408 ---------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AA+ L LEP ++++ L+N+YA W + +R+R LMKD G++ PGC
Sbjct: 630 VHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGC 689
Query: 459 SWIE 462
SWIE
Sbjct: 690 SWIE 693
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 149/287 (51%), Gaps = 4/287 (1%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V++ +S + R ++ +A S +++C + CL ++ GF ++V S
Sbjct: 22 VDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSG 81
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM---- 231
LI++YSK I +A +F++MP R+ VSW ++IA ++Q + L+ M NS
Sbjct: 82 LISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWK 141
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
L +DFT ++L AC G G G+ H +++GF S + V+ S + MYCKCG ++ A
Sbjct: 142 LLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAG 201
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
F+ + KDIV+WN+MI GYAQ+ AI+LF +M + KP+ TF V+ +
Sbjct: 202 LAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMS 261
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G+ + + K G ++ + +VD+ + +E+ +M
Sbjct: 262 DSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEM 308
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 146/287 (50%), Gaps = 1/287 (0%)
Query: 121 SMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
SM + +L V L+T + +CG R G A++ GF ++++V S + +Y
Sbjct: 132 SMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMY 191
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
KC ++ A F+++ +++V+W +I +AQ + +EL+ M +PND TF
Sbjct: 192 CKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFC 251
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
+L A T GR H + +++G + VA +L+ MY K ++E+ F M +
Sbjct: 252 CVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKR 311
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
++VS+N++I GY+ G A+ ++ ++ + ++PD+ TF+G+ SSC V EG
Sbjct: 312 NLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVH 371
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K GL ++ + +V+ + G + A + + + PN+V W
Sbjct: 372 VHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVCW 417
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 150/293 (51%), Gaps = 1/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I + + + E K + + + + + + G + ++ G +V+V ++L
Sbjct: 229 EEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATAL 288
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +YSK I D + F EM RN+VS+ A+I ++ + + L +Y +++ +EP+
Sbjct: 289 VDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDS 348
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FTF + S+C+ S + +G H +++ G S + V NS+++ Y KCG + A+ F +
Sbjct: 349 FTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFES 408
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
++ + V W +I+G+AQ+G +A+ F +M K K D + VI + VE+G
Sbjct: 409 INRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQG 468
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + K GL + S V+D+ + G++E+A+ MP N V W +
Sbjct: 469 RHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNS 520
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NVV WT+ I A+ VD L + M + +EPN T+++ +SAC S S H
Sbjct: 5 NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLH 64
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
C ++ GF + + V++ LISMY K ++EA ++F++M +D VSWNSMIAGY+Q GL
Sbjct: 65 CLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNE 124
Query: 320 RAIDLFEEMMKQ----RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
A LF M+ ++ T V+ +C G GK K G +L
Sbjct: 125 EACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVS 184
Query: 376 SCVVDLLGRAGLLEEA 391
V + + G+L+ A
Sbjct: 185 GSTVYMYCKCGILDMA 200
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 224/392 (57%), Gaps = 19/392 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+ L+ D + + V +C N+ G + G N+ V ++++ +Y KC I
Sbjct: 207 DNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIES 266
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF + ++V+SWT++++ A+ L L++ M+ + +E ++ T +LSAC
Sbjct: 267 AQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQ 326
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+GAL QG+ H + + + +L+ MY KCG+++ A+ VF M +++ +WN++
Sbjct: 327 TGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAL 386
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHG 367
I G A HG AI LF++M ++ PD +TF+ ++ +C H GLV+EG F +M K
Sbjct: 387 IGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQ 446
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAE 411
++P ++HY CVVDLL RA +++A FI+ MPI N+V+W E
Sbjct: 447 IEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIG 506
Query: 412 SRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
R++ LEP+ +V L+NLYAGV WD A ++RK MK+KG++ PGCSWIE+ ++++F
Sbjct: 507 RRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQF 566
Query: 471 RAEDKSNTRLSEILPVLDFLVDQMK-TLGYVP 501
A D+S+ + +I +++ + ++ G+VP
Sbjct: 567 VAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVP 598
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 154/291 (52%), Gaps = 2/291 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S+++ + + VD + +C ++ G + C ++ GF ++++V ++LI
Sbjct: 96 VSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQF 155
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFT 238
Y C A VF+E VR+VV+W +I A + + +L M + L P++ T
Sbjct: 156 YHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVT 215
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
S++ AC G L +G+ H + +G ++V N+++ MYCKC ++E A VFN +
Sbjct: 216 MVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIR 275
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
KD++SW SM++G A+ G A+ LF++M +++ D IT +GV+S+C G +++GK
Sbjct: 276 EKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKY 335
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ K + +L + +VD+ + G ++ A ++M + N W A
Sbjct: 336 IHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRV-RNVFTWNA 385
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 9/269 (3%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY--SKCRVIIDAY 190
+ FL T TS T+ L +RT + N S LI+ S + A
Sbjct: 12 ISVDFLKTHCTSISKTKQAHA------LLLRTHLLHNPLFSSKLISFLALSHSGDLNYAR 65
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
K+F +M + +I +A+ + LY M + +++T+ +L+AC G
Sbjct: 66 KLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLG 125
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
A+ GR HC+ ++ GF S + V N+LI Y CG+ A VF+ +D+V+WN MI
Sbjct: 126 AVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMIN 185
Query: 311 GYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+ GL+ +A DL +EM K ++PD +T + ++ +C G +E GK + GL
Sbjct: 186 AHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLD 245
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L + ++D+ + +E A++ ++
Sbjct: 246 ENLRVNNAILDMYCKCDDIESAQEVFNRI 274
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 214/392 (54%), Gaps = 19/392 (4%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R + +DA + + +C I+ G A+RT F V ++LIT+YS+CR +
Sbjct: 310 RTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLG 369
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A+ +F + +++W A+++ +A + + L+R M +EPN T S+L C
Sbjct: 370 HAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCA 429
Query: 248 GSGALGQGRSAHCQTIRMG-FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
L G+ HC ++ F Y+ + N+L+ MY + G V EA VF+++ +D V++
Sbjct: 430 RIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYT 489
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK- 365
SMI GY G + LFEEM K +KPD +T + V+++C H GLV +G+V F M
Sbjct: 490 SMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDV 549
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EA 409
HG+ P L+HY+C+ DL GRAGLL +A++FI MP P + +W E
Sbjct: 550 HGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEW 609
Query: 410 AESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
A +LL ++P+ + +V +AN+YA W + A VR M++ G++ PGC+W+++ +
Sbjct: 610 AAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLAEVRTYMRNLGVRKAPGCAWVDVGSEFS 669
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
F D SN SEI P++D L + MK GYV
Sbjct: 670 PFLVGDSSNPHASEIYPLMDGLNELMKDAGYV 701
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 8/218 (3%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+ + + +C +++ G I G N + S L+ Y+ +++DA V E
Sbjct: 84 IGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSN 143
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG-- 255
+ + W +I+A+ + L +Y+ M N +EP+++T+ S+L AC S G
Sbjct: 144 TLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLE 203
Query: 256 --RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
RS ++ F V N+L+SMY + G +E A ++F+NM +D VSWN++I+ YA
Sbjct: 204 VHRSIEASSMEWSLF----VHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYA 259
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
G+ A LF M ++ V+ + I + + C H G
Sbjct: 260 SRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSG 297
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S+L ACT +L QG+ H Q I +G + + L++ Y + +A +V + +
Sbjct: 86 SLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTL 145
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D + WN +I+ Y ++G V A+ +++ M+ ++++PD T+ V+ +C G
Sbjct: 146 DPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVH 205
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPEC 420
S+ ++ L ++ +V + GR G LE AR MP ++V W
Sbjct: 206 RSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMP-RRDSVSWNT----------- 253
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ + YA W +A ++ M+++G++ N
Sbjct: 254 ------IISCYASRGIWKEAFQLFGSMQEEGVEMN 282
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 220/405 (54%), Gaps = 18/405 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D K + + +H + L + +C + G ++ GF + +Y+ +
Sbjct: 293 DSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMT 352
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+K V DA K F + ++V WT++IA + Q + + L LY M+ + P
Sbjct: 353 ALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILP 412
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N+ T S+L AC+ A QGR H +TI+ G + + ++L +MY KCGN+EE VF
Sbjct: 413 NELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVF 472
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +DI+SWN+MI+G +Q+G A++LFEEM +Q KPD +TF+ V+S+C H GLV+
Sbjct: 473 RRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVD 532
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
G +YF M + GL P+++HY+C+VD+L RAG L EA++FI+ I +W
Sbjct: 533 SGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGA 592
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A E + L + ++ +V L+ +Y + + RVR +MK +G+ P
Sbjct: 593 CRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEP 652
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
GCSWIE+ + V+ F D+ + + EI + L QMK GY P
Sbjct: 653 GCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDEGYQP 697
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 163/287 (56%), Gaps = 12/287 (4%)
Query: 129 ERLKVD-----ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+R++ D A S T+ + +I G +AI+ +V+VGSSL+ +Y K
Sbjct: 100 QRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKA 159
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
++ +A +VF+ MP RN V+W +I+ +A + E++ +MR + N+F FTS+L
Sbjct: 160 GLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVL 219
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
SA + G+ HC ++ G ++ + N+L++MY KCG++++++ VF + K+ +
Sbjct: 220 SALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSI 279
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+W++MI GYAQ G + +A+ LF M + P T +GV+++C VEEGK + +
Sbjct: 280 TWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYL 339
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYPNAVIW 407
K G + +L + +VD+ ++G+ E+AR ++++Q P+ V+W
Sbjct: 340 LKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQ----PDLVLW 382
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 154/289 (53%), Gaps = 1/289 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ RE V+ ++ +++ + G CLA++TG + + + ++L+T+Y+KC
Sbjct: 203 MRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGS 262
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ D+ +VFE +N ++W+A+I +AQ L+L+ M + + P++FT +L+A
Sbjct: 263 LDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNA 322
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C+ + A+ +G+ H +++GF S + + +L+ MY K G E+A FN + D+V W
Sbjct: 323 CSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLW 382
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
SMIAGY Q+G A+ L+ M + + P+ +T V+ +C + ++G+ K
Sbjct: 383 TSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIK 442
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+GL E+ S + + + G LEE ++MP + + W A S L
Sbjct: 443 YGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMP-ERDIISWNAMISGL 490
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 129/242 (53%), Gaps = 3/242 (1%)
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV--DMCLELYRMM 227
+Y+ +SLI Y+KC + A VF+ + ++V+SW +I ++Q+ +EL++ M
Sbjct: 43 IYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRM 102
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
R + PN TF+ I +A + ++ G+ AH I+M F + V +SL++MYCK G +
Sbjct: 103 RADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLL 162
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
EA VF+ M ++ V+W +MI+GYA LA A ++FE M ++ + F V+S+
Sbjct: 163 FEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSAL 222
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
V+ GK K GL L + +V + + G L+++ + +M N++ W
Sbjct: 223 AVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQ-VFEMSNDKNSITW 281
Query: 408 EA 409
A
Sbjct: 282 SA 283
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 4/179 (2%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEA 290
L P + + + L T +L +GR+ H Q I++ S I +ANSLI+ Y KC ++ +A
Sbjct: 3 LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA--IDLFEEMMKQRVKPDAITFLGVISSCR 348
VF+ +H KD++SWN +I GY+Q G + ++LF+ M + P+A TF G+ ++
Sbjct: 63 KLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAAS 122
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + G+ K ++ S ++++ +AGLL EAR+ +MP N V W
Sbjct: 123 NLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMP-ERNEVTW 180
>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 218/404 (53%), Gaps = 19/404 (4%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D+ L + +C + + G AIR+ F V ++LIT+YS+C+ + AY +
Sbjct: 290 LDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLL 349
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+ M +++++W +II+ + + L R M +EPN T S+L C L
Sbjct: 350 FQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANL 409
Query: 253 GQGRSAHC-QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
G+ HC T R F ++ + N+L+ MY + G V EA VF+ + +D +++ SMIAG
Sbjct: 410 QHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAG 469
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKP 370
Y G A+ LFEEM ++KPD IT + V+S+C H GLV +G++ F+ M + +GL P
Sbjct: 470 YGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTP 529
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
L+H++C+ DL GRAGLL +A++ I+ MP P +W AAE
Sbjct: 530 HLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKL 589
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
L ++PE +V +AN+YA CW++ A+VR M+D G++ PGC+W+++ F +
Sbjct: 590 LEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVD 649
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
D SN EI P+L+ L MK GY+ D+ S + E
Sbjct: 650 DTSNANADEIYPLLEGLTMVMKEAGYISSEDFGSGDETSGEFNE 693
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 110/243 (45%), Gaps = 20/243 (8%)
Query: 119 LISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
LI +H + L V +S+ ++SC +++ G I GF + + L+T
Sbjct: 86 LIRLHASSASQDLIVHP--ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVT 143
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
YS +++DA+ + E + + W +I+++ + L Y+ M + P++FT
Sbjct: 144 FYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFT 203
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ S+L AC LG G+ H ++I S+Y G EA +F +M
Sbjct: 204 YPSVLKACGEELDLGFGKEVH-ESINA-------------SLYASMGMWNEAFELFGSMW 249
Query: 299 GKD----IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+D I+ WN++ GY + G A++L +M K D++ + + +C H G +
Sbjct: 250 AEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAK 309
Query: 355 EGK 357
GK
Sbjct: 310 LGK 312
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 211/369 (57%), Gaps = 21/369 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+ G + + + +SL+ Y+ A K+F EMP R+ V+W +I+ A+ + L
Sbjct: 146 VAEGHLRDALLATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDAL 205
Query: 222 ELYRMMR--NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+L+ MR +S EP+D T +L ACT GAL G G+ + ++V NSLI+
Sbjct: 206 KLFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKVRNSLIA 265
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY +CG V++A VF K +V+W++MI+G A +G AI FEEM++ V PD T
Sbjct: 266 MYSRCGCVDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVAPDEQT 325
Query: 340 FLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFI-KQ 397
F GV+S+C H GLV+EG +FD M ++GLKP + HY C+VDL+GRAGLL+EA + + +
Sbjct: 326 FTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYELVTNE 385
Query: 398 MPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQA 440
M + P+A IW E S L+ L+ + A +V L N YA V W +
Sbjct: 386 MKVAPDATIWRTLLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAVGEWSKV 445
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
+ VRKLM++KG++T PGC+ +E VY F A+D ++ R EI L+ + Q++ GYV
Sbjct: 446 SEVRKLMQEKGIQTTPGCTTVEHNGEVYEFIADDDAHPRKVEIYEKLNEINKQLRIAGYV 505
Query: 501 PEVHEEKVD 509
P V E D
Sbjct: 506 PNVSSELHD 514
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L R MR N FT +L AL R H + G +A SL++
Sbjct: 107 LRFLRRMRALGRRGNAFTLAILLKP---RCALAHARQLHANVVAEGHLRDALLATSLMAC 163
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR--VKPDAI 338
Y G+ + A +F M +D V+WN +I+ A++ A+ LFEEM + +PD +
Sbjct: 164 YANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDALKLFEEMRGRDSGAEPDDV 223
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
T + ++ +C G ++ G+ + +HG +L + ++ + R G +++A
Sbjct: 224 TCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKVRNSLIAMYSRCGCVDKAYRVFCGT 283
Query: 399 PIYPNAVIWEAAESRL 414
P + V W A S L
Sbjct: 284 P-QKSVVTWSAMISGL 298
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 205/364 (56%), Gaps = 18/364 (4%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G L ++ GF +YV S+L+ +Y+KC I DA + F+++ ++V WTA+++ Q
Sbjct: 234 GKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQ 293
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ + L LY M + P+ T S L AC G AL G+ H Q ++ G V
Sbjct: 294 NGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPV 353
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
++L +MY KCGN+E+ + VF + +D+++WNS+I+G++Q+G A+DLFEEM +
Sbjct: 354 GSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGT 413
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEAR 392
PD ITF+ ++ +C H GLV+ G YF M K +GL P LDHY+C+VD+L RAG+L+EA+
Sbjct: 414 IPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAK 473
Query: 393 DFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVR 435
DFI+ + I +W A E + L ++ ++ L+N+YA R
Sbjct: 474 DFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQR 533
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W+ RVR LM+ +G+ +PGCSW+E+ + V+ F ++ + I L L MK
Sbjct: 534 KWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMK 593
Query: 496 TLGY 499
GY
Sbjct: 594 DEGY 597
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 144/267 (53%), Gaps = 6/267 (2%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
++NVYV +SL+ +Y K ++ DA +VF+ MP RN SW+ ++A +A E + +L+R+
Sbjct: 44 VSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRL 103
Query: 227 M-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M E ++F T++LSA + L G H ++ G ++ V NSL++MY K G
Sbjct: 104 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAG 163
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
+ A +VF + ++ ++W++MI GYAQ+G A A+ +F +M P TF+GV++
Sbjct: 164 CMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLN 223
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
+ G + GK M K G + ++ S +VD+ + G + +A++ Q+ + V
Sbjct: 224 ASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL-YEVDIV 282
Query: 406 IWEAAESRLLLEPECAATHVQLANLYA 432
+W A S + E H + LYA
Sbjct: 283 LWTAMVSGHVQNGE----HEEALTLYA 305
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 139/266 (52%), Gaps = 1/266 (0%)
Query: 135 ASFLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+ F++TAV S S + G L ++ G + V V +SL+T+Y+K + A+ VF
Sbjct: 113 SEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVF 172
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
E RN ++W+A+I +AQ + D + ++ M + P +FTF +L+A + GAL
Sbjct: 173 ESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALA 232
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ AH +++GF I V ++L+ MY KCG + +A F+ ++ DIV W +M++G+
Sbjct: 233 VGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHV 292
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q+G A+ L+ M K+ + P T + +C +E GK + K+GL
Sbjct: 293 QNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 352
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMP 399
S + + + G LE+ +++P
Sbjct: 353 VGSALSTMYSKCGNLEDGMSVFRRIP 378
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 105 FDQLLDTPVVDVEKLISMH--HDLHRERLKVDA-----------SFLSTAVTSCGSTRNI 151
FDQL + +V ++S H + H E L + A S +++ + +C +
Sbjct: 273 FDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAAL 332
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
G ++ G VGS+L T+YSKC + D VF +P R+V++W +II+ F
Sbjct: 333 EPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGF 392
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+Q + L+L+ M+ P++ TF +IL AC+ G + +G
Sbjct: 393 SQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRG 436
>gi|297827165|ref|XP_002881465.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327304|gb|EFH57724.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 224/407 (55%), Gaps = 28/407 (6%)
Query: 110 DTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN 169
DTPV + I ++ ++ R R+K + + +C S + G Q ++ GF ++
Sbjct: 92 DTPV----ESIWVYSEMKRRRIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDSD 147
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
VYVG++LI LY C+ DA KVF+EM RNVVSW +I+ A + + ++ +E + M
Sbjct: 148 VYVGNNLIHLYGSCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKFNLVVECFFEMIG 207
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
P++ T +LSAC G+ L G+ H Q + ++ +L+ MY K G ++
Sbjct: 208 RQFCPDETTMVVLLSACGGN--LSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLKY 265
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCR 348
A VF M K++ +W++MI G AQ+G A A+ LF +MMK+ V+P+ +TFLGV+ +C
Sbjct: 266 ARLVFERMADKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACS 325
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV++G YF M K H +KP + HY +VD+LGRAG L EA DFI++MP P+AV+W
Sbjct: 326 HTGLVDDGYKYFHEMEKRHKIKPMMIHYGAMVDILGRAGRLNEAYDFIQKMPFEPDAVVW 385
Query: 408 -------------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
E + RL+ LEP+ + V +AN +A R WD+AA VR++M
Sbjct: 386 RTLLSACSIHHDEDDKGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWDEAAEVRRVM 445
Query: 448 KDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
K+ +K G S +E+ ++F + I +LD Q+
Sbjct: 446 KETKMKKIAGESCLELGGSFHKFFSGYDPRPEYVSIYELLDLFKFQL 492
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 215/384 (55%), Gaps = 19/384 (4%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
F++ S G G + C +++TG +V+V +LI +YSKC I DA VF++M
Sbjct: 235 FVTMIRASAGLGLIFAGRQLHSC-SLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQM 293
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
P + V W +IIA +A + L +Y MR+S ++ ++FTF+ I+ C +L +
Sbjct: 294 PEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAK 353
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
AH +R GF I +L+ +Y K G +E+A +VF+ M K+++SWN++IAGY HG
Sbjct: 354 QAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHG 413
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHY 375
V A+++FE M+ + + P+ +TFL V+S+C + GL + G F+SM++ H +KP HY
Sbjct: 414 RGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHY 473
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEP 418
+C+++LLGR GLL+EA IK P P +W AAE + P
Sbjct: 474 ACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGP 533
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
E + +V L N+Y ++AA V + +K +GL+ P CSWIEI Y F + DK +
Sbjct: 534 EKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHA 593
Query: 479 RLSEILPVLDFLVDQMKTLGYVPE 502
+ EI LD L+ ++ GYVP+
Sbjct: 594 QSKEIYQKLDELMLEISKHGYVPQ 617
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 1/277 (0%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D+ V++C ++IRG I +G + Y+ + ++ ++ KC ++IDA ++
Sbjct: 129 MDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRL 188
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+EMP +N++SW II L+ MM + F +++ A G G +
Sbjct: 189 FDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLI 248
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
GR H +++ G + VA +LI MY KCG++E+A VF+ M K V WNS+IAGY
Sbjct: 249 FAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGY 308
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
A HG + A+ ++ EM VK D TF +I C +E K + +HG ++
Sbjct: 309 ALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDI 368
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VDL + G +E+A+ MP + N + W A
Sbjct: 369 VANTALVDLYSKWGRIEDAKHVFDMMP-HKNVISWNA 404
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 221 LELYRMMR-NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
LEL+ ++ N + + T+ +++SAC G ++ + I G + N ++
Sbjct: 115 LELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLL 174
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
M+ KCG + +A +F+ M K+I+SWN++I G G A LF M + +
Sbjct: 175 MHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRM 234
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
F+ +I + GL+ G+ K G+ ++ ++D+ + G +E+A+ QMP
Sbjct: 235 FVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMP 294
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/404 (33%), Positives = 218/404 (53%), Gaps = 19/404 (4%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D+ L + +C + + G AIR+ F V ++LIT+YS+C+ + AY +
Sbjct: 335 LDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLL 394
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+ M +++++W +II+ + + L R M +EPN T S+L C L
Sbjct: 395 FQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANL 454
Query: 253 GQGRSAHC-QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
G+ HC T R F ++ + N+L+ MY + G V EA VF+ + +D +++ SMIAG
Sbjct: 455 QHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAG 514
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKP 370
Y G A+ LFEEM ++KPD IT + V+S+C H GLV +G++ F+ M + +GL P
Sbjct: 515 YGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTP 574
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESR 413
L+H++C+ DL GRAGLL +A++ I+ MP P +W AAE
Sbjct: 575 HLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKL 634
Query: 414 LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
L ++PE +V +AN+YA CW++ A+VR M+D G++ PGC+W+++ F +
Sbjct: 635 LEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVD 694
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTE 517
D SN EI P+L+ L MK GY+ D+ S + E
Sbjct: 695 DTSNANADEIYPLLEGLTMVMKEAGYISSEDFGSGDETSGEFNE 738
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 11/282 (3%)
Query: 119 LISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
LI +H + L V +S+ ++SC +++ G I GF + + L+T
Sbjct: 86 LIRLHASSASQDLIVHP--ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVT 143
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
YS +++DA+ + E + + W +I+++ + L Y+ M + P++FT
Sbjct: 144 FYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFT 203
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNM 297
+ S+L AC LG G+ H ++I + + V N+LISMY KCG V A +F+ +
Sbjct: 204 YPSVLKACGEELDLGFGKEVH-ESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKI 262
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D VSWNSMI+ YA G+ A +LF M + ++ + I + + G +
Sbjct: 263 PERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGAL 322
Query: 358 VYFDSMAKHGLKPELDHYSCVVDL-----LGRAGLLEEARDF 394
M K G LD + ++ L +G A L +E F
Sbjct: 323 ELLSQMRKCG--SHLDSVALIIGLGACSHIGDAKLGKEIHSF 362
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 104/216 (48%), Gaps = 18/216 (8%)
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+S+LS+CT +L +GR H I +GF + + L++ Y + +A + N +
Sbjct: 104 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 163
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
WN +I+ Y ++G +A+ +++M+K+ ++PD T+ V+ +C + GK
Sbjct: 164 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 223
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPE 419
+S+ +K L ++ ++ + G+ G + ARD ++P +AV W +
Sbjct: 224 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIP-ERDAVSWNS---------- 272
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ ++YA + W++A + M + ++ N
Sbjct: 273 -------MISVYASMGMWNEAFELFGSMWAEDIELN 301
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 217/382 (56%), Gaps = 18/382 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S + +C S + G I+ G A VG+ L+++Y+K + A K F+ +
Sbjct: 369 FSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLF 428
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+N+VS T + +++ ++ +L R + + FT+ S+LS G +G+G
Sbjct: 429 EKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQ 488
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +++GF + + V N+LISMY KCGN E A+ VFN+M ++++W S+I G+A+HG
Sbjct: 489 IHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGF 548
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYS 376
A +A++LF M++ VKP+ +T++ V+S+C H GL++E +F SM HG+ P ++HY+
Sbjct: 549 ASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYA 608
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPE 419
C+VDLLGR+GLL EA +FI MP +A++W AA+ L EP
Sbjct: 609 CMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPH 668
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
AT++ L+NLYA W+ A +RK MK K + G SWIE+ N V++F D + +
Sbjct: 669 DPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPK 728
Query: 480 LSEILPVLDFLVDQMKTLGYVP 501
+I LD L ++K +GYVP
Sbjct: 729 AQQIYEKLDELALKIKNVGYVP 750
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 180/403 (44%), Gaps = 46/403 (11%)
Query: 34 QKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFT 93
Q ++ + LHKA+ L++ + + K L++ ++T + HL + +H T
Sbjct: 21 QNFNHFNNPQQLHKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHL-GKLLHHKLT 79
Query: 94 GTN------------STFGSSN-------VFDQLLDTP--VVDVEKLISMHHDLHRERLK 132
+N + + SN +F + ++ VV +IS + +R LK
Sbjct: 80 TSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFAN-NRNCLK 138
Query: 133 VDASF---------------LSTAVTSCGSTRNIRGGAPYQCLAIRTG-FIANVYVGSSL 176
F + + +C + G ++TG F ++V VG L
Sbjct: 139 AVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCEL 198
Query: 177 ITLYSKCRVIID---AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSML 232
I ++ K + D A KVF++M +NVV+WT +I AQ D ++L+ M+ +S
Sbjct: 199 IDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGY 258
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
P+ FT T ++S C L G+ H IR G + V SL+ MY KCG V+EA
Sbjct: 259 VPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARK 318
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAV--RAIDLFEEMMKQ-RVKPDAITFLGVISSCRH 349
VF+ M +++SW +++ GY + G A+ +F M+ Q V P+ TF GV+ +C
Sbjct: 319 VFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACAS 378
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ G+ K GL + +V + ++G +E AR
Sbjct: 379 LPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESAR 421
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 6/276 (2%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ ++ C + + G IR+G + ++ VG SL+ +Y+KC ++ +A KVF+ M
Sbjct: 265 LTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMR 324
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE----PNDFTFTSILSACTGSGALG 253
NV+SWTA++ + + E RM N +L+ PN FTF+ +L AC
Sbjct: 325 EHNVMSWTALVNGYVRGGG-GYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFD 383
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G H QTI++G + V N L+S+Y K G +E A F+ + K++VS +
Sbjct: 384 FGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNV 443
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
+ DL E+ + T+ ++S G + +G+ + K G + +L
Sbjct: 444 KDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLS 503
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++ + + G E A M N + W +
Sbjct: 504 VNNALISMYSKCGNKEAALQVFNDMED-CNVITWTS 538
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 214/391 (54%), Gaps = 18/391 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ +E + V+A + + C ++ G ++R G ++ VG+ L+T+Y +C
Sbjct: 150 MRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGS 209
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ A K+F+ MP + +++W A+I+ +AQ L+LYR M + + P+ T +LS+
Sbjct: 210 VDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSS 269
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C GA GR + GF + N+LI+MY +CGN+ +A +F+ M K+++SW
Sbjct: 270 CAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISW 329
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
++IAGY HG A+ LF+EM+ PD F+ V+S+C H GL E+G YF +M +
Sbjct: 330 TAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMER 389
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA-------------- 410
+GL+P +HYSCVVDLLGRAG LEEAR I M + P+ +W A
Sbjct: 390 DYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAE 449
Query: 411 ---ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
E + EP +V L+N+++ + RVR +M+++ LK PGCS++E +
Sbjct: 450 LAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRI 509
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLG 498
+ F A D+++ + EI +LD L D +K G
Sbjct: 510 HLFLAGDRTHPQAQEIYHMLDGLEDIIKRRG 540
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 142/273 (52%), Gaps = 7/273 (2%)
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE-MPVR 199
A SC S G+ I+TG +V +SLI++Y KC I A KVF+E R
Sbjct: 62 AFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSR 121
Query: 200 NV-VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
N+ V + A+IA ++ + + L+R MR + N T ++ C G LG G S
Sbjct: 122 NLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSL 181
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H ++R G + V N L++MY +CG+V+ A +F+ M K +++WN+MI+GYAQ+GLA
Sbjct: 182 HACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLA 241
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD--SMAKHGLKPELDHYS 376
+DL+ +M + PD +T +GV+SSC H G G+ ++ G P L +
Sbjct: 242 GHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLK--N 299
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++++ R G L +AR M N + W A
Sbjct: 300 ALINMYARCGNLVKARAIFDGM-TEKNVISWTA 331
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
SW A + A++ L LY M S PN FTF +C G H
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN-NMHGKDI-VSWNSMIAGYAQHGLAVR 320
I+ G V SLISMYCKC + A VF+ N H +++ V +N++IAGY+ +
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
A+ LF +M K+ V +A+T LG+I C + G + GL +L +C++
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202
Query: 381 LLGRAGLLEEARDFIKQMP----IYPNAVIWEAAESRL 414
+ R G ++ AR MP I NA+I A++ L
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGL 240
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 212/352 (60%), Gaps = 19/352 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
V ++L+ Y K ++++ +VF +P +++V+W+A++ AQ + +E++ +
Sbjct: 441 VATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEG 500
Query: 232 LEPNDFTFTSILSACTGSGA-LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
++PN++TF+S+++AC+ S A + G+ H ++ G + + V+++L++MY K GN+E A
Sbjct: 501 VKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESA 560
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF +DIVSWNSMI GY QHG A +A+++F+ M Q + D +TF+GV+++C H
Sbjct: 561 EKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHA 620
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE- 408
GLVEEG+ YF+ M K + + +++HYSC+VDL RAG+ ++A D I MP + IW
Sbjct: 621 GLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRT 680
Query: 409 ----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
AAE + L+P A +V L+N++A W++ A VRKLM ++ +
Sbjct: 681 LLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKV 740
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
K GCSWIEI N ++ F A D S+ + L+ L ++K +GY P+ +
Sbjct: 741 KKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTN 792
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 133/285 (46%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
DLH L VD LS A+ CG + G C ++++GF+ +V VG+SL+ +Y K
Sbjct: 94 DLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTE 153
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
D +F+EM ++NVVSWT++++ +A+ D + L M+ + PN FTF ++L
Sbjct: 154 DFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLG 213
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
A + G H ++ GF V N+LI MY K V +A VF++M +D V+
Sbjct: 214 ALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVT 273
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN MI GYA G + +F M VK F + C + K +
Sbjct: 274 WNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVV 333
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K+G + D + ++ + ++EA N V W A
Sbjct: 334 KNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTA 378
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 142/278 (51%), Gaps = 10/278 (3%)
Query: 126 LHRERL---KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
HR RL K+ + TA+ C R + C ++ G+ + ++L+ YSK
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 183 CRVIIDAYKVFEEM-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
C + +A+K+F NVV+WTA+I F Q + ++L+ M + PN FT+++
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYST 413
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+L A S L Q H Q I+ + VA +L+ Y K GNV E+ VF ++ KD
Sbjct: 414 VL-AGKPSSLLSQ---LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC-RHGGLVEEGKVYF 360
IV+W++M+ G AQ + +A+++F +++K+ VKP+ TF VI++C VE GK
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD-FIKQ 397
+ K G L S ++ + + G +E A F +Q
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ 567
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 117/231 (50%), Gaps = 1/231 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+++I + + + E + + +T + + I GG + ++ GF +V ++L
Sbjct: 187 DEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNAL 246
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y K ++ DA VF+ M VR+ V+W +I +A +++ MR + ++ +
Sbjct: 247 ICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSR 306
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F + L C+ L + HC ++ G+ + +L+ Y KC +V+EA +F+
Sbjct: 307 TVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSM 366
Query: 297 MH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++V+W +MI G+ Q+ +A+DLF +M ++ V+P+ T+ V++
Sbjct: 367 ADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAG 417
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVG 173
D EK + + L +E +K + S+ + +C S+ + G A+++G + V
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVS 544
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
S+L+T+YSK I A KVF R++VSW ++I + Q LE++++M+N L
Sbjct: 545 SALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLP 604
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVY 292
+D TF +L+ACT +G + +G I+ I+ + ++ +Y + G ++A+
Sbjct: 605 LDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMD 664
Query: 293 VFNNM 297
+ N M
Sbjct: 665 IINGM 669
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 205/364 (56%), Gaps = 18/364 (4%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G L ++ GF +YV S+L+ +Y+KC I DA + F+++ ++V WTA+++ Q
Sbjct: 340 GKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQ 399
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ + L LY M + P+ T S L AC G AL G+ H Q ++ G V
Sbjct: 400 NGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPV 459
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
++L +MY KCGN+E+ + VF + +D+++WNS+I+G++Q+G A+DLFEEM +
Sbjct: 460 GSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGT 519
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEAR 392
PD ITF+ ++ +C H GLV+ G YF M K +GL P LDHY+C+VD+L RAG+L+EA+
Sbjct: 520 IPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAK 579
Query: 393 DFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVR 435
DFI+ + I +W A E + L ++ ++ L+N+YA R
Sbjct: 580 DFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQR 639
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W+ RVR LM+ +G+ +PGCSW+E+ + V+ F ++ + I L L MK
Sbjct: 640 KWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMK 699
Query: 496 TLGY 499
GY
Sbjct: 700 DEGY 703
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 144/267 (53%), Gaps = 6/267 (2%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
++NVYV +SL+ +Y K ++ DA +VF+ MP RN SW+ ++A +A E + +L+R+
Sbjct: 150 VSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRL 209
Query: 227 M-RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M E ++F T++LSA + L G H ++ G ++ V NSL++MY K G
Sbjct: 210 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAG 269
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
+ A +VF + ++ ++W++MI GYAQ+G A A+ +F +M P TF+GV++
Sbjct: 270 CMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLN 329
Query: 346 SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
+ G + GK M K G + ++ S +VD+ + G + +A++ Q+ + V
Sbjct: 330 ASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL-YEVDIV 388
Query: 406 IWEAAESRLLLEPECAATHVQLANLYA 432
+W A S + E H + LYA
Sbjct: 389 LWTAMVSGHVQNGE----HEEALTLYA 411
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 139/266 (52%), Gaps = 1/266 (0%)
Query: 135 ASFLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+ F++TAV S S + G L ++ G + V V +SL+T+Y+K + A+ VF
Sbjct: 219 SEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVF 278
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
E RN ++W+A+I +AQ + D + ++ M + P +FTF +L+A + GAL
Sbjct: 279 ESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALA 338
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G+ AH +++GF I V ++L+ MY KCG + +A F+ ++ DIV W +M++G+
Sbjct: 339 VGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHV 398
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q+G A+ L+ M K+ + P T + +C +E GK + K+GL
Sbjct: 399 QNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 458
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMP 399
S + + + G LE+ +++P
Sbjct: 459 VGSALSTMYSKCGNLEDGMSVFRRIP 484
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKC--RVIIDAYKVFEEMP--VRNVVSWTAI 207
R G A+++G ++ V +SLI YS ++ A+ VF+++P R+V SW ++
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM-G 266
+ + +D M+ +S + P+ +F + +A + + G +AH ++
Sbjct: 89 LNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
S + V SL++MYCK G V +A VF+ M ++ SW++M+AGYA + A DLF
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208
Query: 327 EMMKQ 331
M+++
Sbjct: 209 LMLEE 213
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 105 FDQLLDTPVVDVEKLISMH--HDLHRERLKVDA-----------SFLSTAVTSCGSTRNI 151
FDQL + +V ++S H + H E L + A S +++ + +C +
Sbjct: 379 FDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAAL 438
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
G ++ G VGS+L T+YSKC + D VF +P R+V++W +II+ F
Sbjct: 439 EPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGF 498
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+Q + L+L+ M+ P++ TF +IL AC+ G + +G
Sbjct: 499 SQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRG 542
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 205/359 (57%), Gaps = 19/359 (5%)
Query: 163 RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
+T +V+VGSSL+ Y+KC + A KVF+EMP +NVVSW+ +I ++Q + L
Sbjct: 136 KTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALN 195
Query: 223 LYR--MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L++ + ++ + NDFT +S+L C+ S G+ H + F S VA+SLIS+
Sbjct: 196 LFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISL 255
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KCG VE VF + +++ WN+M+ AQH R +LFEEM + VKP+ ITF
Sbjct: 256 YSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITF 315
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
L ++ +C H GLVE+G+ F M +HG++P HY+ +VDLLGRAG LEEA IK+MP+
Sbjct: 316 LCLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPM 375
Query: 401 YPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
P +W A A+ + + V L+N YA W++AAR
Sbjct: 376 QPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARA 435
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
RK+M+D+G+K G SW+E N V+ F A D+S+ + EI L+ L ++M GYV +
Sbjct: 436 RKMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVAD 494
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 3/264 (1%)
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
TR++R G I+ GF A V LI YSK + + K+F+ P ++ +W+++
Sbjct: 20 TRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSV 79
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I++FAQ L +R M L P+D T + + +L S H +++
Sbjct: 80 ISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAH 139
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ V +SL+ Y KCG+V A VF+ M K++VSW+ MI GY+Q GL A++LF+
Sbjct: 140 HHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKR 199
Query: 328 MMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
++Q ++ + T V+ C L E GK K S ++ L +
Sbjct: 200 ALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKC 259
Query: 386 GLLEEARDFIKQMPIYPNAVIWEA 409
G++E +++ + N +W A
Sbjct: 260 GVVEGGYKVFEEVKVR-NLGMWNA 282
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+L T + +L +G H Q I++GF + V + LI+ Y K ++ +F++ K
Sbjct: 13 VLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKS 72
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+W+S+I+ +AQ+ L + A+ F M++ + PD T S +
Sbjct: 73 ATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHA 132
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K ++ S +VD + G + AR +MP + N V W
Sbjct: 133 LSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMP-HKNVVSWSG 179
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 230/431 (53%), Gaps = 29/431 (6%)
Query: 101 SSNVFDQLLDTPVVD---------VEKLISMHHDLHRERLKV--DASFLSTAVTSCGSTR 149
+ NVFD++ +V KL + RE L + D +S+ +++C
Sbjct: 254 AENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLV 313
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+ G ++ G + VYV +SL+ +Y KC + DA K+F R+VV+W +I
Sbjct: 314 ELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIM 373
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ + ++ M +EP++ +++S+ A AL QG H ++ G
Sbjct: 374 GCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVK 433
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
++++SL++MY KCG++ +A VF ++V W +MI + QHG A AI LFEEM+
Sbjct: 434 NSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEML 493
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLL 388
+ V P+ ITF+ V+S+C H G +++G YF+SMA H +KP L+HY+C+VDLLGR G L
Sbjct: 494 NEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRL 553
Query: 389 EEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLY 431
EEA FI+ MP P++++W E AE LEP+ ++ L+N+Y
Sbjct: 554 EEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIY 613
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLV 491
++A VR+LM G++ GCSWI++ N + F A D+S++R EI +L L
Sbjct: 614 IRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLK 673
Query: 492 DQMKTLGYVPE 502
+ +K GYV E
Sbjct: 674 ELIKRRGYVAE 684
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 127/229 (55%), Gaps = 11/229 (4%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELY 224
+AN+ ++L+ LY+KC I +F P NVV+WT +I ++ + L +
Sbjct: 132 LANI---NTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFF 188
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
MR + + PN FTF++IL AC + L +G+ H + F + VA +L+ MY KC
Sbjct: 189 NRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKC 248
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G++ A VF+ M +++VSWNSMI G+ ++ L RAI +F E++ + PD ++ V+
Sbjct: 249 GSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLS--LGPDQVSISSVL 306
Query: 345 SSCRHGGLVEE--GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
S+C GLVE GK S+ K GL + + +VD+ + GL E+A
Sbjct: 307 SAC--AGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDA 353
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 135/272 (49%), Gaps = 3/272 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
S + +C + G L + F+ + +V ++L+ +Y+KC ++ A VF+EMP
Sbjct: 203 FSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMP 262
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN+VSW ++I F + + ++R + + L P+ + +S+LSAC G L G+
Sbjct: 263 HRNLVSWNSMIVGFVKNKLYGRAIGVFREVLS--LGPDQVSISSVLSACAGLVELDFGKQ 320
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++ G + V NSL+ MYCKCG E+A +F +D+V+WN MI G +
Sbjct: 321 VHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRN 380
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+A F+ M+++ V+PD ++ + + + +G + + K G S
Sbjct: 381 FEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSS 440
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+V + G+ G + +A ++ + N V W A
Sbjct: 441 LVTMYGKCGSMLDAYQVFRETKEH-NVVCWTA 471
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM--HGKDIVSWNSM 308
+L H Q + + + N+L+ +Y KCG++ + +FN ++V+W ++
Sbjct: 112 SLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTL 171
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I ++ +A+ F M + P+ TF ++ +C H L+ EG+ + KH
Sbjct: 172 INQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCF 231
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ + ++D+ + G + A + +MP + N V W +
Sbjct: 232 LNDPFVATALLDMYAKCGSMLLAENVFDEMP-HRNLVSWNS 271
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
IR G+ A+V V ++L+ YS ++ A +VF++MP R++V+W A+I+ F+Q+ L
Sbjct: 132 IRCGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEAL 191
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+ Y MR+ ++ + FT ++S+C GAL G H G + V N+LI MY
Sbjct: 192 QTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMY 251
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++++A+ +F+ M KDI +WNSMI GY HG AI F++M++ R++P+ +TFL
Sbjct: 252 AKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFL 311
Query: 342 GVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEA--------- 391
G++ C H GLV+EG YF+ M +K LKPE+ HY C+VDL GRAG L++A
Sbjct: 312 GLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSSH 371
Query: 392 ------RDFIKQMPIYPNAVIWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVR 444
R + I+ N I E A +RL L A + LA +YAG + AR+R
Sbjct: 372 NDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMR 431
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
K++K +G KT PG SWIEI V++F +DKS+ E+ L ++ Q GYV +
Sbjct: 432 KMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQASFFGYVGD 489
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 1/201 (0%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F +M +W +II FAQ +D + +M+ +S P+ FTF+ +L AC
Sbjct: 60 LFHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIK 119
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
A + + H IR G+ + + V +L+ Y G V A VF+ M +D+V+WN+MI+
Sbjct: 120 AERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMIS 179
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
++Q GL A+ + +M + V D T +G+ISSC H G + G ++GL
Sbjct: 180 CFSQQGLHQEALQTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQ 239
Query: 371 ELDHYSCVVDLLGRAGLLEEA 391
L + ++D+ + G L++A
Sbjct: 240 SLYVGNALIDMYAKCGSLDQA 260
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + ++ + E + VD L ++SC + G A G ++YVG++L
Sbjct: 188 QEALQTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNAL 247
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC + A +F+ M +++ +W ++I + + + ++ M + ++PN
Sbjct: 248 IDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNP 307
Query: 237 FTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF +L C+ G + +G + + + + ++ L+ +Y + G +++A+ + +
Sbjct: 308 VTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVS 367
Query: 296 NMHGKDIVSWNSMIAGYAQH 315
N D V W ++ H
Sbjct: 368 NSSHNDSVLWRILLGSCKIH 387
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK---CGNVEEAVYVFNNM 297
+IL+ G +L + R H I G ++ +AN L++ +C G++ A +F+ M
Sbjct: 6 AILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLN-FCAISVSGSLAYAQLLFHQM 64
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK-PDAITFLGVISSCRHGGLVEEG 356
+WNS+I G+AQ + AI + +M+ PD TF V+ +C +
Sbjct: 65 ECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERKC 124
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K S+ + G ++ + +V GL+ AR +MP + V W A
Sbjct: 125 KEVHGSVIRCGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPA-RDLVAWNA 176
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 202/350 (57%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV ++++T Y++ ++ +A VF+ MP ++ VSW A++AA++Q + L+L+ M
Sbjct: 316 NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMG 375
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N F +LS C AL G H + IR G+ V N+L++MY KCGN+E
Sbjct: 376 RCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNME 435
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A F M +D+VSWN+MIAGYA+HG A+++F+ M KPD IT +GV+++C
Sbjct: 436 DARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACS 495
Query: 349 HGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLVE+G YF SM G+ + +HY+C++DLLGRAG L EA D +K MP P++ +W
Sbjct: 496 HSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMW 555
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AAE LEPE A +V L+N+YA W A ++R +M+++
Sbjct: 556 GALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEER 615
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G+K PG SWIE+ N V+ F A D + +I L+ L +MK GYV
Sbjct: 616 GVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV 665
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
Y ++L+ + + DA +F+EMPVR+ V++ +I++ A V + + +
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP-- 158
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
E + ++ +L+A +G + + R S+ N+L+S Y + G + EA
Sbjct: 159 --EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISW----NALMSGYVQWGKMSEA 212
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F+ M G+D+VSWN M++GYA+ G V A LF+ + D T+ V+S
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR----DVFTWTAVVSGYAQN 268
Query: 351 GLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGRAGLLEEARDFIKQMP 399
G++EE + FD+M PE + ++ +V + +++EA++ MP
Sbjct: 269 GMLEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAKELFNMMP 313
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
V+ S + +++C + G IR G+ +VG++L+ +Y KC + DA
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
FEEM R+VVSW +IA +A+ LE++ MMR + +P+D T +L+AC+ SG +
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 253 GQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIA 310
+G S + G + + +I + + G + EA + +M D W +++
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560
Query: 311 GYAQH 315
H
Sbjct: 561 ASRIH 565
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 149/321 (46%), Gaps = 34/321 (10%)
Query: 84 DSQKFN---HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH------------HDLHR 128
D+ +N H ++S + +FD++ V +IS H DL
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E+ V + + A G RG RT + A + ++L++ Y + + +
Sbjct: 159 EKDAVSWNGMLAAYVRNGRVEEARG-----LFNSRTEWDAISW--NALMSGYVQWGKMSE 211
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A ++F+ MP R+VVSW +++ +A+ + DM +E R+ + + + FT+T+++S
Sbjct: 212 ARELFDRMPGRDVVSWNIMVSGYAR--RGDM-VEARRLFDAAPVR-DVFTWTAVVSGYAQ 267
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+G L + R S+ N++++ Y + ++EA +FN M +++ SWN+M
Sbjct: 268 NGMLEEARRVFDAMPERNAVSW----NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTM 323
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ GYAQ G+ A +F+ M ++ DA+++ ++++ GG EE F M + G
Sbjct: 324 LTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 369 KPELDHYSCVVDLLGRAGLLE 389
++CV+ LE
Sbjct: 380 WVNRSAFACVLSTCADIAALE 400
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 50/265 (18%)
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
IT + + + DA ++F MP R+ ++ A++A ++ ++ + L+R ++ P++
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR----AIPRPDN 100
Query: 237 FTFTSILSACTGSGALGQGR------------------SAHCQTIRMGFFS----YIQVA 274
+++ ++L A S +L R S+H G S Y +A
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANH---GLVSLARHYFDLA 157
Query: 275 --------NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
N +++ Y + G VEEA +FN+ D +SWN++++GY Q G A +LF+
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFD 217
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGR 384
M + D +++ ++S G + E + FD+ P D ++ VV +
Sbjct: 218 RMPGR----DVVSWNIMVSGYARRGDMVEARRLFDA------APVRDVFTWTAVVSGYAQ 267
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G+LEEAR MP NAV W A
Sbjct: 268 NGMLEEARRVFDAMP-ERNAVSWNA 291
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 99/263 (37%), Gaps = 73/263 (27%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ------------------- 314
+N I+ + + G V +A +F M + ++N+M+AGY+
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDN 100
Query: 315 -------HGLAVR-----AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
H LAV A LF+EM + D++T+ +ISS + GLV + YFD
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARHYFD- 155
Query: 363 MAKHGLKPELD--HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPEC 420
L PE D ++ ++ R G +EEAR + +A+ W A
Sbjct: 156 -----LAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEW-DAISWNA----------- 198
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG---CSWIEIMNVVYRFRAEDKSN 477
L +G W + + R+L PG SW IM Y R +
Sbjct: 199 ---------LMSGYVQWGKMSEAREL-----FDRMPGRDVVSW-NIMVSGYARRGDMVEA 243
Query: 478 TRLSEILPVLDFLVDQMKTLGYV 500
RL + PV D GY
Sbjct: 244 RRLFDAAPVRDVFTWTAVVSGYA 266
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 202/350 (57%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV ++++T Y++ ++ +A VF+ MP ++ VSW A++AA++Q + L+L+ M
Sbjct: 316 NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMG 375
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N F +LS C AL G H + IR G+ V N+L++MY KCGN+E
Sbjct: 376 RCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNME 435
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A F M +D+VSWN+MIAGYA+HG A+++F+ M KPD IT +GV+++C
Sbjct: 436 DARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACS 495
Query: 349 HGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLVE+G YF SM G+ + +HY+C++DLLGRAG L EA D +K MP P++ +W
Sbjct: 496 HSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMW 555
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AAE LEPE A +V L+N+YA W A ++R +M+++
Sbjct: 556 GALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEER 615
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G+K PG SWIE+ N V+ F A D + +I L+ L +MK GYV
Sbjct: 616 GVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV 665
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
Y ++L+ + + DA +F+EMPVR+ V++ +I++ A V + + +
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP-- 158
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
E + ++ +L+A +G + + R S+ N+L+S Y + G + EA
Sbjct: 159 --EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISW----NALMSGYVQWGKMSEA 212
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F+ M G+D+VSWN M++GYA+ G V A LF+ + D T+ V+S
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR----DVFTWTAVVSGYAQN 268
Query: 351 GLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGRAGLLEEARDFIKQMP 399
G++EE + FD+M PE + ++ +V + +++EA++ MP
Sbjct: 269 GMLEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAKELFNMMP 313
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
V+ S + +++C + G IR G+ +VG++L+ +Y KC + DA
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
FEEM R+VVSW +IA +A+ LE++ MMR + +P+D T +L+AC+ SG +
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 253 GQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIA 310
+G S + G + + +I + + G + EA + +M D W +++
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560
Query: 311 GYAQH 315
H
Sbjct: 561 ASRIH 565
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 50/265 (18%)
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
IT + + + DA ++F MP R+ ++ A++A ++ ++ + L+R ++ P++
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR----AIPRPDN 100
Query: 237 FTFTSILSACTGSGALGQGR------------------SAHCQTIRMGFFS----YIQVA 274
+++ ++L A S +L R S+H G S Y +A
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANH---GLVSLARHYFDLA 157
Query: 275 --------NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
N +++ Y + G VEEA +FN+ D++SWN++++GY Q G A +LF+
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFD 217
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGR 384
M + D +++ ++S G + E + FD+ P D ++ VV +
Sbjct: 218 RMPGR----DVVSWNIMVSGYARRGDMVEARRLFDA------APVRDVFTWTAVVSGYAQ 267
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G+LEEAR MP NAV W A
Sbjct: 268 NGMLEEARRVFDAMP-ERNAVSWNA 291
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 149/321 (46%), Gaps = 34/321 (10%)
Query: 84 DSQKFN---HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH------------HDLHR 128
D+ +N H ++S + +FD++ V +IS H DL
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E+ V + + A G RG RT + +V ++L++ Y + + +
Sbjct: 159 EKDAVSWNGMLAAYVRNGRVEEARG-----LFNSRTEW--DVISWNALMSGYVQWGKMSE 211
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A ++F+ MP R+VVSW +++ +A+ + DM +E R+ + + + FT+T+++S
Sbjct: 212 ARELFDRMPGRDVVSWNIMVSGYAR--RGDM-VEARRLFDAAPVR-DVFTWTAVVSGYAQ 267
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+G L + R S+ N++++ Y + ++EA +FN M +++ SWN+M
Sbjct: 268 NGMLEEARRVFDAMPERNAVSW----NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTM 323
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ GYAQ G+ A +F+ M ++ DA+++ ++++ GG EE F M + G
Sbjct: 324 LTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 369 KPELDHYSCVVDLLGRAGLLE 389
++CV+ LE
Sbjct: 380 WVNRSAFACVLSTCADIAALE 400
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 33/243 (13%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+N I+ + + G V +A +F M + ++N+M+AGY+ +G A LF +
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI----P 96
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH--YSCVVDLLGRAGLLEEA 391
+PD ++ ++ + + + + FD M P D Y+ ++ GL+ A
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEM------PVRDSVTYNVMISSHANHGLVSLA 150
Query: 392 RDFIKQMPIYPNAVIWEA-----------AESRLLLEPECAATHVQLANLYAGVRCWDQA 440
R + P +AV W E+R L + L +G W +
Sbjct: 151 RHYFDLAP-EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209
Query: 441 ARVRKLMKDKGLKTNPG---CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
+ R+L PG SW IM Y R + RL + PV D
Sbjct: 210 SEAREL-----FDRMPGRDVVSW-NIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 263
Query: 498 GYV 500
GY
Sbjct: 264 GYA 266
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 227/413 (54%), Gaps = 31/413 (7%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGF--IANVY- 171
DVE + + + + L+ D S V + + G I++G+ + V+
Sbjct: 183 DVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFE 242
Query: 172 -VG-------SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLEL 223
+G +++I + K +A+ VF+ P +NVVSWT++I +A+ + L
Sbjct: 243 SIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSF 302
Query: 224 YRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
+ M + ++P+DFTF ++L AC+ LG G+ H I GF +Y+ V N L++MY K
Sbjct: 303 FVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAK 362
Query: 284 CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
CG+++ + F + GKD+VSWN+M+ G HG A +A++L+EEM+ +KPD +TF+G+
Sbjct: 363 CGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGL 422
Query: 344 ISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP--- 399
+ +C H GL+E+G+ F+SM +GL E +H C+VDLLGR G L +AR+ + +
Sbjct: 423 LMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTG 482
Query: 400 ----IYPNAVI---WEAAESRL---------LLEPECAATHVQLANLYAGVRCWDQAARV 443
P A++ + +E R+ + EP+ ++V L+NLY W +A V
Sbjct: 483 RAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKEAEMV 542
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKT 496
RK M D G+K PGCSWIE+ N V F A + S+ + E+ +L+FL +M+
Sbjct: 543 RKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHPYMEELCKILNFLKFEMRN 595
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 155/335 (46%), Gaps = 43/335 (12%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + + H + + D + +++C +R G + +G +++ VG+SL
Sbjct: 53 QQALCLFHHMRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSL 112
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI----------------------------- 207
I +Y KC A +VFEEM + N VSW ++
Sbjct: 113 IDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWN 172
Query: 208 --IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
I+ + Q V++CL L++ MR L+P+ +TF+++++A G H I+
Sbjct: 173 IMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKS 232
Query: 266 GFFSYIQV-----------ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+ ++V N++I + K G+ EA VF K++VSW SMI GYA+
Sbjct: 233 GWDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYAR 292
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+G +A+ F +MM+ ++PD TF V+ +C + GK+ S+ +G +D
Sbjct: 293 NGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDV 352
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +V++ + G ++ + K++ + + V W A
Sbjct: 353 GNGLVNMYAKCGDIQGSNTAFKEI-LGKDLVSWNA 386
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 31/210 (14%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
++++ +S I +K I A ++F+EMP ++ V+W A++A+++Q L L+ M
Sbjct: 3 SHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHM 62
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC--- 284
R + P+ FTFT+ LSAC G G L +G H Q + G S + V NSLI MY KC
Sbjct: 63 RIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSA 122
Query: 285 ----------------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
G + A VF+ M K ++WN MI+GY Q G
Sbjct: 123 TSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCG 182
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+ LF++M + ++PD TF ++++
Sbjct: 183 DVELCLGLFKKMREDSLQPDQWTFSALVNA 212
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
S++ S I K G + A +F+ M KD V+WN+M+A Y+Q GL +A+ LF M
Sbjct: 3 SHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHM 62
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
+PD TF +S+C G + G + G + L + ++D+ G+
Sbjct: 63 RIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSA 122
Query: 389 EEARDFIKQMPIYPNAVIW 407
AR ++M I N V W
Sbjct: 123 TSARRVFEEMSIM-NEVSW 140
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 221/398 (55%), Gaps = 20/398 (5%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
+ ++ D S + T +++C + +I G GF N+ + ++LI LYSKC +
Sbjct: 228 KTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELE 287
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A +F+ + ++V+SW +I + L L++ M S +PND T SILSAC
Sbjct: 288 TACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACA 347
Query: 248 GSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
GA+ GR H + G + + SLI MY KCG++E A VF++M + + SW
Sbjct: 348 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSW 407
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+MI G+A HG A A D+F M K ++PD ITF+G++S+C H G+++ G+ F SM +
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTR 467
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------- 407
+ L P+L+HY C++DL G +GL +EA I M + P+ VIW
Sbjct: 468 DYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGE 527
Query: 408 EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
A++ + +EPE ++V L+N+YA W++ A+ R L+ DKG+K PGCS IEI +VV
Sbjct: 528 SYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 587
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
+ F DK + R EI +L+ + ++ G+VP+ E
Sbjct: 588 HEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSE 625
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 132/228 (57%), Gaps = 4/228 (1%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LIT Y+ I A+K+F+E+PV++VVSW A I+ +A+ LEL++ M + +
Sbjct: 173 TALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVR 232
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P++ T ++LSAC SG++ GR H GF +++ N+LI +Y KCG +E A +
Sbjct: 233 PDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGL 292
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F + KD++SWN++I GY L A+ LF++M++ KP+ +T L ++S+C H G +
Sbjct: 293 FQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAI 352
Query: 354 EEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ G+ VY D K G+ + ++D+ + G +E A+ M
Sbjct: 353 DIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 31/234 (13%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF+ + ++ W + A L+LY M + L PN +TF +L +C
Sbjct: 56 AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
S A +G+ H Q ++ GF + + SLISMY + G +E+A V + +D+VS+ ++
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175
Query: 309 IAGYAQHG-----------LAVR--------------------AIDLFEEMMKQRVKPDA 337
I GYA G + V+ A++LF++MMK V+PD
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
T + V+S+C G +E G+ + HG L + ++DL + G LE A
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETA 289
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 214/360 (59%), Gaps = 19/360 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
VGS+L+ +Y KC I +A +VF+ + +++V+W A+I +AQ + + L+ MR +
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAG 350
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+ T +LSAC+ GAL G R G +S + V +L+ MY KCG++++A+
Sbjct: 351 MRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAI 410
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHG 350
VF M K++ SWN++I G A +G AI F+ M + +KPD ITF+GV+S+C H
Sbjct: 411 EVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHA 470
Query: 351 GLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV---- 405
GLV++GK +F+S+ + + P+++HYSC+VDLL R+G LEEA DFI+++P +AV
Sbjct: 471 GLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGA 530
Query: 406 ------------IWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
I E +R++ LEP + +V + +YA D +A++R LM+++G+
Sbjct: 531 LLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGV 590
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDAS 512
PGCSW+E+ V F A D+ ++ VLD LVD+M+ GYVP + E + AS
Sbjct: 591 NKTPGCSWVEVSGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNLDVEVLPWAS 650
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 132/241 (54%), Gaps = 12/241 (4%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE- 233
SLIT+YS A KVF+ +P R+VVSW A++ A+ +V M E+ RM R+ + E
Sbjct: 192 SLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYG---RVGMNGEVGRMFRDMVKEG 248
Query: 234 ---PNDFTFTSILSACTGSGALGQGRSAH--CQTIRMGFFSYIQVANSLISMYCKCGNVE 288
PN T +L+AC G L GR + RM S V ++L+ MY KCG +
Sbjct: 249 TVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL--VGSALLGMYEKCGEIA 306
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA VF+ + KDIV+WN+MI GYAQ+G++ AI LF M ++PD IT GV+S+C
Sbjct: 307 EARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACS 366
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
G +E G ++ GL + + +VD+ + G L++A + ++MP N W
Sbjct: 367 AVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPC-KNVASWN 425
Query: 409 A 409
A
Sbjct: 426 A 426
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 104 VFDQLLDTPVVDVEKLI-------------SMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD ++D +V +I S+ H + ++ D L+ +++C +
Sbjct: 311 VFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGA 370
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G+ A R G +NVYVG++L+ +Y+KC + A +VF +MP +NV SW A+I
Sbjct: 371 LELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICG 430
Query: 211 FAQEWQVDMCLELYRMMRNSM-LEPNDFTFTSILSACTGSGALGQG-RSAHCQTIRMGFF 268
A + D ++ +++MRN L+P+D TF +LSAC +G + G R + T
Sbjct: 431 LAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQII 490
Query: 269 SYIQVANSLISMYCKCGNVEEA 290
I+ + ++ + + G++EEA
Sbjct: 491 PKIEHYSCMVDLLARSGHLEEA 512
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L L+ M S + P+ +T +L A A R+AH ++G + +SLI+M
Sbjct: 137 LRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITM 196
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAIT 339
Y + A VF+ + +D+VSWN+M+ Y + G+ +F +M+K+ V P+ +T
Sbjct: 197 YSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVT 256
Query: 340 FLGVISSCRHGGLVEEGK 357
V+++CR G + G+
Sbjct: 257 VAVVLAACRDQGDLVLGR 274
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 210/378 (55%), Gaps = 24/378 (6%)
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
++ G A++ G+ + V V +SLI +Y KC+ I DA ++FE M +++ SW +I++
Sbjct: 252 DLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVS 311
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF-- 267
Q D L L M + ++P+ T T++L AC+ AL GR H I G
Sbjct: 312 VHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGK 371
Query: 268 ----FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
+ + N++I MY KCG++ +A VF M KD+ SWN MI GY HG A++
Sbjct: 372 DGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALE 431
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLL 382
+F M + ++KPD +TF+GV+S+C H G V +G+ + M +K+ + P ++HY+CV+D+L
Sbjct: 432 MFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDML 491
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHV 425
GRAG L+EA + MPI N V+W E A R+ LEPE ++V
Sbjct: 492 GRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYV 551
Query: 426 QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILP 485
++N+Y V +++ VR M+ + ++ PGCSWIE+ N V+ F + D+++ I
Sbjct: 552 LMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYA 611
Query: 486 VLDFLVDQMKTLGYVPEV 503
L+ L ++ GYVP+V
Sbjct: 612 GLNSLTARLXEHGYVPDV 629
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 145/288 (50%), Gaps = 9/288 (3%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + E + D A+ +C I+ L + G +V++GS+L
Sbjct: 121 EEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSAL 177
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ Y K ++ A FEE+P+R+VV W A++ +AQ Q +M LE +R M + + P+
Sbjct: 178 VNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSR 237
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT T LS G L GR H ++MG+ S + V+NSLI MY KC +E+A+ +F
Sbjct: 238 FTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEM 297
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M KDI SWNS+++ + Q G + L + M+ ++PD +T V+ +C H + G
Sbjct: 298 MREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHG 357
Query: 357 KVYFDSMAKHGL---KPELDHY---SCVVDLLGRAGLLEEARDFIKQM 398
+ M GL ++D + V+D+ + G + +A ++M
Sbjct: 358 REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM 405
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 3/199 (1%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NV ++ AII+ F + E Y+ MRN + P+ FTF + AC + + H
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIH 159
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+ G + + ++L++ Y K G +E A F + +D+V WN+M+ GYAQ G
Sbjct: 160 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFE 219
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
++ F M + V P T G +S G + G++ K G + + ++
Sbjct: 220 MVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 380 DLLGRAGLLEEARDFIKQM 398
D+ G+ +E+A + + M
Sbjct: 280 DMYGKCKCIEDALEIFEMM 298
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
S++Q+ L S K G + H ++ ++N++I+G+ +G + +++M
Sbjct: 78 SFVQLEIELPSNTLKAGENDPT-------HEINVFAFNAIISGFITNGFPEEGFEFYQKM 130
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLL 388
+ V PD TF I +C V E K + K GL+ ++ S +V+ + GL+
Sbjct: 131 RNEGVMPDKFTFPCAIKACLD---VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLM 187
Query: 389 EEARDFIKQMPIYPNAVIWEA 409
E A+ +++PI + V+W A
Sbjct: 188 EHAQVAFEELPIR-DVVLWNA 207
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 224/394 (56%), Gaps = 23/394 (5%)
Query: 131 LKVDASFLSTAVTSCG--STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+ +D+ + + +++C S + I G ++ GF ++ VG++L+ Y+KC +
Sbjct: 1247 VPLDSVVMVSVLSACSRVSGKGITEGV--HGFVVKKGFDGSIGVGNTLMDAYAKCGQPLV 1304
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACT 247
+ KVF+ M ++ +SW ++IA +AQ LE++ M+R+ + N T +++L AC
Sbjct: 1305 SKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACA 1364
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
+GAL G+ H Q I+M + V S+I MYCKCG VE A F+ M K++ SW +
Sbjct: 1365 HAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTA 1424
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KH 366
M+AGY HG A A+D+F +M++ VKP+ ITF+ V+++C H GLVEEG +F++M K+
Sbjct: 1425 MVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKY 1484
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------A 409
++P ++HY C+VDL GRAG L EA + IK+M + P+ V+W A
Sbjct: 1485 DIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIA 1544
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
A+ L+P+ +V L+NLYA W R+R LMK++ L PG S +E+ V+
Sbjct: 1545 AQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHV 1604
Query: 470 FRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
F DK + I L+ L +++ +GYVP +
Sbjct: 1605 FLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNM 1638
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 167/320 (52%), Gaps = 32/320 (10%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + ++ ++ + + D + +C + +I G I+ GF +V+V ++L
Sbjct: 107 EQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNL 166
Query: 177 ITLYSKC-------------RV------------------IIDAYKVFEEMPVRNVVSWT 205
I Y KC RV + +A ++F+E+P +NVVSWT
Sbjct: 167 IDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWT 226
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
A+I + + Q + LEL++ M+ + PN++T S++ ACT G L GR H I+
Sbjct: 227 AMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKN 286
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
+ + +LI MY KCG++++A+ VF M K + +WNSMI HGL A++LF
Sbjct: 287 CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLF 346
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGR 384
EM + VKPDAITF+GV+ +C H V+EG YF M +H G+ P +HY C+ +L R
Sbjct: 347 SEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYAR 406
Query: 385 AGLLEEARDFIKQMPIYPNA 404
+ L+EA K++ N+
Sbjct: 407 SNNLDEAFKSTKEVGSLANS 426
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 10/273 (3%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
+SF T + SC + ++ G A GF +++V S+LI +YSKC + DA +F+
Sbjct: 1143 SSFPCT-IKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFD 1201
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND--------FTFTSILSAC 246
E+P+RNVVSWT++I + Q Q D L L++ E D S+LSAC
Sbjct: 1202 EIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSAC 1261
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ G H ++ GF I V N+L+ Y KCG + VF+ M KD +SWN
Sbjct: 1262 SRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWN 1321
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
SMIA YAQ GL+ A+++F M++ V+ +A+T V+ +C H G + GK D + K
Sbjct: 1322 SMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK 1381
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L+ + + ++D+ + G +E A+ +M
Sbjct: 1382 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 1414
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
IR+G + + LI LYS I A +F ++ +W II A + L
Sbjct: 51 IRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQAL 110
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
LY+ M + + FTF ++ ACT ++ G+ H I+ GF + V N+LI Y
Sbjct: 111 MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFY 170
Query: 282 CK-------------------------------CGNVEEAVYVFNNMHGKDIVSWNSMIA 310
K CG+++EA +F+ + K++VSW +MI
Sbjct: 171 FKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMIN 230
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
GY ++ A++LF+ M + + P+ T + +I +C G++ G+ D K+ ++
Sbjct: 231 GYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI 290
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + ++D+ + G +++A + + MP
Sbjct: 291 GVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NV SW ++IA A+ L + +R L P +F + +C+ L GR +H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
Q GF + + V+++LI MY KCG +++A +F+ + +++VSW SMI GY Q+ A
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225
Query: 320 RAIDLFEEMMKQR--------VKPDAITFLGVISSCRH--GGLVEEGKVYFDSMAKHGLK 369
A+ LF++ +++ V D++ + V+S+C G + EG F + K G
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGF--VVKKGFD 1283
Query: 370 PELDHYSCVVDLLGRAG 386
+ + ++D + G
Sbjct: 1284 GSIGVGNTLMDAYAKCG 1300
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R H + IR G + + LI +Y G + A+ +F + +WN +I +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
GL+ +A+ L++ M+ Q + D TF VI +C + ++ GKV S+ K+G ++
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL 415
+ ++D + G A ++M + N V W S L+
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLI 202
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A + + + ++ SWNS+IA A+ G +V A+ F + K + P +F I SC
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-- 407
+ G++ G + +L S ++D+ + G L++AR ++P+ N V W
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTS 1213
Query: 408 --------EAAESRLLL 416
E A++ LLL
Sbjct: 1214 MITGYVQNEQADNALLL 1230
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 202/350 (57%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV ++++T Y++ ++ +A VF+ MP ++ VSW A++AA++Q + L+L+ M
Sbjct: 316 NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMG 375
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N F +LS C AL G H + IR G+ V N+L++MY KCGN+E
Sbjct: 376 RCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNME 435
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A F M +D+VSWN+MIAGYA+HG A+++F+ M KPD IT +GV+++C
Sbjct: 436 DARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACS 495
Query: 349 HGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLVE+G YF SM G+ + +HY+C++DLLGRAG L EA D +K MP P++ +W
Sbjct: 496 HSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMW 555
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AAE LEPE A +V L+N+YA W A ++R +M+++
Sbjct: 556 GALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEER 615
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G+K PG SWIE+ N V+ F A D + +I L+ L +MK GYV
Sbjct: 616 GVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV 665
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
Y ++L+ + + DA +F+EMPVR+ V++ +I++ A V + + +
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP-- 158
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
E + ++ +L+A +G + + R S+ N+L+S Y + G + EA
Sbjct: 159 --EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISW----NALMSGYVQWGKMSEA 212
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F+ M G+D+VSWN M++GYA+ G V A LF+ + D T+ V+S
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR----DVFTWTAVVSGYAQN 268
Query: 351 GLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGRAGLLEEARDFIKQMP 399
G++EE + FD+M PE + ++ +V + +++EA++ MP
Sbjct: 269 GMLEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAKELFNMMP 313
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
V+ S + +++C + G IR G+ +VG++L+ +Y KC + DA
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
FEEM R+VVSW +IA +A+ LE++ MMR + +P+D T +L+AC+ SG +
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 253 GQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIA 310
+G S + G + + +I + + G + EA + +M D W +++
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560
Query: 311 GYAQH 315
H
Sbjct: 561 ASRIH 565
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 149/321 (46%), Gaps = 34/321 (10%)
Query: 84 DSQKFN---HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH------------HDLHR 128
D+ +N H ++S + +FD++ V +IS H DL
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAP 158
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E+ V + + A G RG RT + +V ++L++ Y + + +
Sbjct: 159 EKDAVSWNGMLAAYVRNGRVEEARG-----LFNSRTEW--DVISWNALMSGYVQWGKMSE 211
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A ++F+ MP R+VVSW +++ +A+ + DM +E R+ + + + FT+T+++S
Sbjct: 212 ARELFDRMPGRDVVSWNIMVSGYAR--RGDM-VEARRLFDAAPVR-DVFTWTAVVSGYAQ 267
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+G L + R S+ N++++ Y + ++EA +FN M +++ SWN+M
Sbjct: 268 NGMLEEARRVFDAMPERNAVSW----NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTM 323
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ GYAQ G+ A +F+ M ++ DA+++ ++++ GG EE F M + G
Sbjct: 324 LTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 369 KPELDHYSCVVDLLGRAGLLE 389
++CV+ LE
Sbjct: 380 WVNRSAFACVLSTCADIAALE 400
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 50/265 (18%)
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
IT + + + DA ++F MP R+ ++ A++A ++ ++ + L+R ++ P++
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR----AIPRPDN 100
Query: 237 FTFTSILSACTGSGALGQGR------------------SAHCQTIRMGFFS----YIQVA 274
+++ ++L A S +L R S+H G S Y +A
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANH---GLVSLARHYFDLA 157
Query: 275 --------NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
N +++ Y + G VEEA +FN+ D++SWN++++GY Q G A +LF+
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFD 217
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD--HYSCVVDLLGR 384
M + D +++ ++S G + E + FD+ P D ++ VV +
Sbjct: 218 RMPGR----DVVSWNIMVSGYARRGDMVEARRLFDA------APVRDVFTWTAVVSGYAQ 267
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
G+LEEAR MP NAV W A
Sbjct: 268 NGMLEEARRVFDAMP-ERNAVSWNA 291
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 33/243 (13%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+N I+ + + G V +A +F M + ++N+M+AGY+ +G A LF +
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI----P 96
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH--YSCVVDLLGRAGLLEEA 391
+PD ++ ++ + + + + FD M P D Y+ ++ GL+ A
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEM------PVRDSVTYNVMISSHANHGLVSLA 150
Query: 392 RDFIKQMPIYPNAVIWEA-----------AESRLLLEPECAATHVQLANLYAGVRCWDQA 440
R + P +AV W E+R L + L +G W +
Sbjct: 151 RHYFDLAP-EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209
Query: 441 ARVRKLMKDKGLKTNPG---CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
+ R+L PG SW IM Y R + RL + PV D
Sbjct: 210 SEAREL-----FDRMPGRDVVSW-NIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 263
Query: 498 GYV 500
GY
Sbjct: 264 GYA 266
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 232/435 (53%), Gaps = 32/435 (7%)
Query: 100 GSSNVFDQLLDTPVVDVEKLISMH--HDLHRER-----------LKVDASFLSTAVTSCG 146
G++ VF ++ +T +V +I+ H LH E L+ D +++ V +C
Sbjct: 312 GANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACA 371
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+ ++ G + +N+ V ++L+ +Y+KC + +A +F ++PV+N+VSW
Sbjct: 372 CSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNT 431
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I ++Q + L+L+ M+ L+P+D T +L AC G AL +GR H +R G
Sbjct: 432 MIGGYSQNSLPNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALEKGREIHGHILRKG 490
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+FS + VA +L+ MY KCG + A +F+ + KD++ W MIAGY HG AI FE
Sbjct: 491 YFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFE 550
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRA 385
+M ++P+ +F ++ +C H GL++EG FDSM ++P+L+HY+C+VDLL R+
Sbjct: 551 KMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRS 610
Query: 386 GLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLA 428
G L A FI+ MPI P+A IW A AE LEPE +V LA
Sbjct: 611 GNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLA 670
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
N+YA W++ ++++ + GLK + GCSWIE+ F A D S+ + I +L
Sbjct: 671 NVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLR 730
Query: 489 FLVDQMKTLGYVPEV 503
L +M GY ++
Sbjct: 731 KLTMKMNRGGYSNKI 745
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 170/318 (53%), Gaps = 17/318 (5%)
Query: 104 VFDQLLDTPVVDVEKLIS--MHHDLHRERLK-----------VDASFLSTAVTSCGSTRN 150
+FD+L D VV +IS + R L+ VD++ L + +C + N
Sbjct: 215 LFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGN 274
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G ++ GF V ++L+ +YSKC + A +VF +M +VSWT+IIAA
Sbjct: 275 LTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAA 334
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+E + L+ M++ L P+ + TS++ AC S +L +GR H + S
Sbjct: 335 HVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSN 394
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ V+N+L++MY KCG++EEA +F+ + K+IVSWN+MI GY+Q+ L A+ LF +M K
Sbjct: 395 LPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQK 454
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC-VVDLLGRAGLLE 389
Q +KPD +T V+ +C +E+G+ + + G +L H +C +VD+ + GLL
Sbjct: 455 Q-LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDL-HVACALVDMYVKCGLLV 512
Query: 390 EARDFIKQMPIYPNAVIW 407
A+ +P + ++W
Sbjct: 513 LAQQLFDMIP-KKDMILW 529
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 151/327 (46%), Gaps = 18/327 (5%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+R +++ + + + C +++ G + G + +G+ L+ +Y C ++
Sbjct: 51 QRSELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVK 110
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
++F+ + + W +++ +A+ + L+ M+ + + +TFT +L
Sbjct: 111 GRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAA 170
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
S + + + H +++GF SY V NSLI+ Y KCG VE A +F+ + +D+VSWNSM
Sbjct: 171 SAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSM 230
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I+G +G + ++ F +M+ V D+ T + V+ +C + G + G+ K G
Sbjct: 231 ISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGF 290
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLA 428
+ + ++D+ + G L A N V + E+ ++ A HV+
Sbjct: 291 SGGVMFNNTLLDMYSKCGNLNGA-----------NEVFVKMGETTIVSWTSIIAAHVREG 339
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTN 455
Y + +D+ M+ KGL+ +
Sbjct: 340 LHYEAIGLFDE-------MQSKGLRPD 359
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 221/402 (54%), Gaps = 29/402 (7%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++ ++ C + ++ G L+ + G +N+ + +SL+ LY KC I +A +F M
Sbjct: 185 LTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRME 244
Query: 198 VRNVVSWTAIIAAFAQEWQV-----------DMCLELYRMMRNSMLEPNDFTFTSILSAC 246
+N+++W A+IA AQ + L +Y + S +P+ FT +SIL+ C
Sbjct: 245 YKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVC 304
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ AL QG H QTI+ GF S + V +L+ MY KCG++E A F +M + ++SW
Sbjct: 305 SRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWT 364
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK- 365
SMI +A+HG + A+ LFE+M +P+ ITF+GV+++C H G+V+E YF+ M K
Sbjct: 365 SMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKE 424
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------E 408
+ +KP +DHY C+VD+ R G L+EA D IK+M + PN IW
Sbjct: 425 YKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFY 484
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AAE L L+P T+V L N+Y W+ + VR+LMK++ + S I I V+
Sbjct: 485 AAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKGEVH 544
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
F+ ++ + +E+ +L+ LVD+ K+LGY + E +DD
Sbjct: 545 SFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDD 586
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 11/266 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS A+ +C S +I G + I+ + +G++L +LYSK + + K F E
Sbjct: 84 LSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETG 143
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++V+SWT II+A + M L L+ M +EPNDFT TS+LS C+ + G
Sbjct: 144 EKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQ 203
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ--- 314
H + ++G S +++ NSL+ +Y KCG ++EA +FN M K++++WN+MIAG+AQ
Sbjct: 204 VHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMD 263
Query: 315 --------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
A+ ++ ++ + KPD T +++ C +E+G+ K
Sbjct: 264 LAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKS 323
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEAR 392
G ++ + +VD+ + G +E AR
Sbjct: 324 GFLSDVVVGTALVDMYDKCGSIERAR 349
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 133/254 (52%), Gaps = 13/254 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+TG +V S L+ +Y+KC V+++A KVF+ +P RNVV WT ++ + Q Q ++ +
Sbjct: 7 IKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAV 66
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
E++ M S P++FT + L+AC+ ++ G+ H I+ + N+L S+Y
Sbjct: 67 EVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLY 126
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
K G+++ +V F KD++SW ++I+ +G A + LF EM+ + V+P+ T
Sbjct: 127 SKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLT 186
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS------CVVDLLGRAGLLEEARDFI 395
V+S C + G M H L +L H S +V L + G ++EA++
Sbjct: 187 SVLSLCSTIQSSDLG------MQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240
Query: 396 KQMPIYPNAVIWEA 409
+M Y N + W A
Sbjct: 241 NRME-YKNLITWNA 253
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 65/133 (48%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H I+ G V + L+++Y KCG + A VF+N+ +++V W +++ GY Q+
Sbjct: 3 HAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQP 62
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A+++F +M++ P T +++C + GK + + K+ + + + +
Sbjct: 63 EVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNAL 122
Query: 379 VDLLGRAGLLEEA 391
L + G L+ +
Sbjct: 123 CSLYSKFGSLDSS 135
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 214/360 (59%), Gaps = 19/360 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
VGS+L+ +Y KC I +A +VF+ + +++V+W A+I +AQ + + L+ MR +
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAG 350
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+ T +LSAC+ GAL G R G +S + V +L+ MY KCG++++A+
Sbjct: 351 MRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAI 410
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHG 350
VF M K++ SWN++I G A +G AI F+ M + +KPD ITF+GV+S+C H
Sbjct: 411 EVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHA 470
Query: 351 GLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV---- 405
GLV++GK +F+S+ + + P+++HYSC+VDLL R+G LEEA DFI+++P +AV
Sbjct: 471 GLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGA 530
Query: 406 ------------IWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
I E +R++ LEP + +V + +YA D +A++R LM+++G+
Sbjct: 531 LLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGV 590
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDAS 512
PGCSW+E+ V F A D+ ++ VLD LVD+M+ GYVP + E + AS
Sbjct: 591 NKTPGCSWVEVSGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNLDVEVLPWAS 650
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 132/241 (54%), Gaps = 12/241 (4%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE- 233
SLIT+YS A KVF+ +P R+VVSW A++ A+ +V M E+ RM R+ + E
Sbjct: 192 SLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYG---RVGMNGEVGRMFRDMVKEG 248
Query: 234 ---PNDFTFTSILSACTGSGALGQGRSAH--CQTIRMGFFSYIQVANSLISMYCKCGNVE 288
PN T +L+AC G L GR + RM S V ++L+ MY KCG +
Sbjct: 249 TVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL--VGSALLGMYEKCGEIA 306
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA VF+ + KDIV+WN+MI GYAQ+G++ AI LF M ++PD IT GV+S+C
Sbjct: 307 EARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACS 366
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
G +E G ++ GL + + +VD+ + G L++A + ++MP N W
Sbjct: 367 AVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPC-KNVASWN 425
Query: 409 A 409
A
Sbjct: 426 A 426
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 104 VFDQLLDTPVVDVEKLI-------------SMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD ++D +V +I S+ H + ++ D L+ +++C +
Sbjct: 311 VFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGA 370
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G+ A R G +NVYVG++L+ +Y+KC + A +VF +MP +NV SW A+I
Sbjct: 371 LELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICG 430
Query: 211 FAQEWQVDMCLELYRMMRNSM-LEPNDFTFTSILSACTGSGALGQG-RSAHCQTIRMGFF 268
A + D ++ +++MRN L+P+D TF +LSAC +G + G R + T
Sbjct: 431 LAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQII 490
Query: 269 SYIQVANSLISMYCKCGNVEEA 290
I+ + ++ + + G++EEA
Sbjct: 491 PKIEHYSCMVDLLARSGHLEEA 512
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L L+ M S + P+ +T +L A A R+AH ++G + +SLI+M
Sbjct: 137 LRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITM 196
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAIT 339
Y + A VF+ + +D+VSWN+M+ Y + G+ +F +M+K+ V P+A+T
Sbjct: 197 YSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNAVT 256
Query: 340 FLGVISSCRHGGLVEEGK 357
V+++CR G + G+
Sbjct: 257 VAVVLAACRDQGDLVLGR 274
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 230/437 (52%), Gaps = 58/437 (13%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR--------- 184
D + +C +++IR IR G+ N + +SLI+ Y C
Sbjct: 10 DHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQVI 69
Query: 185 --------------VIIDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
++ID++ KVF +MP R+VV+W ++I + + + +
Sbjct: 70 RQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEA 129
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L ++ M +S +EP+ FTF S+++AC GAL + H ++ ++++LI M
Sbjct: 130 LRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSALIDM 189
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KCG +E A VF ++ D+ WNS+I G A HGLA+ A+ +F +M + V PD++TF
Sbjct: 190 YSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTF 249
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
LG++ +C H GLV+EG+ YFD M + +KP+L+HY +VDLLGRAGLL+EA I MP
Sbjct: 250 LGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMP 309
Query: 400 IYPNAVIWEAAESRLLLEP----------ECAAT---------HVQLANLYAGVRCWDQA 440
+ P+ ++W R+LL E A +V L+N+Y WD A
Sbjct: 310 MEPDVIVW-----RILLSACRTHRNTELGEVAVANISGPKSGDYVLLSNIYCSQNRWDNA 364
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
VR++MK++G++ G SW E +VV+RFRA DKS+ + +L+ L+ + K G+V
Sbjct: 365 QEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKILEGLIQRTKLEGFV 424
Query: 501 PEVHEEKVDDASHKRTE 517
P +D + ++ E
Sbjct: 425 PSTELVMMDVSEEEKEE 441
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 33/198 (16%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC--------- 284
P+ F +L AC S + H + IR G+ + +A SLIS Y C
Sbjct: 9 PDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQV 68
Query: 285 ------------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
G E A VF M +D+V+WNSMI GY ++G
Sbjct: 69 IRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEE 128
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVD 380
A+ F+ M+ V+PD TF VI++C G + + D M + ++ S ++D
Sbjct: 129 ALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSALID 188
Query: 381 LLGRAGLLEEARDFIKQM 398
+ + G +E A++ + +
Sbjct: 189 MYSKCGRIETAKEVFESV 206
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 229/428 (53%), Gaps = 64/428 (14%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF---- 193
+ +CG +R G LA++ G ++ +V S+++ +Y C V+ DA+++F
Sbjct: 115 FPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRV 174
Query: 194 ------------------------------------------EEMPVRNVVSWTAIIAAF 211
+EMP R+VVSW +IA +
Sbjct: 175 FVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGY 234
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
AQ +E++R M+ + + PN T S+L A + GAL G+ H +R
Sbjct: 235 AQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDD 294
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
+ ++LI MY KCG++E+A+ VF + +++V+W+++IAG A HG A +D FE+M +
Sbjct: 295 VLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERA 354
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEE 390
V P +T++G++S+C H GLV EG+ +FD M + GL+P ++HY C+VDLLGRAGLLEE
Sbjct: 355 GVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEE 414
Query: 391 ARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAG 433
+ + I MPI P+ VIW+A AE + L P + ++V L+N+YA
Sbjct: 415 SEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYAS 474
Query: 434 VRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQ 493
+ W+ A+VR +MK+ ++ +PGCSWIE+ V++ F ED S+ + +I +L +
Sbjct: 475 LGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRN 534
Query: 494 MKTLGYVP 501
+ +GY P
Sbjct: 535 LILVGYRP 542
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 126/295 (42%), Gaps = 50/295 (16%)
Query: 162 IRTGFIANVYVGSSLI--TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ-VD 218
I+T I + + L+ + S R + A K+F M N S+ +I A ++ D
Sbjct: 35 IKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCD 94
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L M+ + +EPN FTF S+ AC + L +GR H ++ G S V ++++
Sbjct: 95 ALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVV 154
Query: 279 SMYCKCGNVEEA-------VYV-------------------------------------- 293
MY CG +E+A V+V
Sbjct: 155 RMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARN 214
Query: 294 -FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
F+ M + +VSWN MIAGYAQ G A+++F EM V P+ +T + V+ + G
Sbjct: 215 LFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGA 274
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+E GK ++ + + S ++D+ + G +E+A + +P N V W
Sbjct: 275 LELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLP-KRNVVTW 328
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 222/391 (56%), Gaps = 30/391 (7%)
Query: 137 FLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
F T + S ++R ++ G + ++ G+ + V V ++LI +Y KC+ I DA +FE
Sbjct: 212 FTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEM 271
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
+ +++ SW +II+ Q D L L+ M S + P+ T T++L AC+ AL G
Sbjct: 272 INEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHG 331
Query: 256 RSAHCQTIRMGF--------FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
R H I G + V+N+++ MY KCG++ A+ +F++M KD+ SWN
Sbjct: 332 REIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNI 391
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKH 366
MI GY HG A+ A+ +F +M + KP+ +T +GV+S+C H G V G+++ M +
Sbjct: 392 MIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTF 451
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------A 409
G+ P ++HY+CV+D+LGRAG LE+A + +++MPI N V+W A
Sbjct: 452 GVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIA 511
Query: 410 AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYR 469
A L LEPE ++V ++N+Y + +++ VRK MK++ +K PGCSWIE+ + V+
Sbjct: 512 ARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHV 571
Query: 470 FRAEDKSNTRLSEI---LPVLDFLVDQMKTL 497
FR D++++ L+ + L + F++D++ L
Sbjct: 572 FRTGDRTHSELNALTNQLCDIGFILDEVLNL 602
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 129/226 (57%), Gaps = 2/226 (0%)
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
+ CL ++ G +V+VGS+L+ Y K + DA KVF E+ +R+VV W A+I +A+
Sbjct: 133 HGCL-LKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGC 191
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
+D LE++R M + P+ FT T ILS G L G++ H ++MG+ S + V+N+
Sbjct: 192 LDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNA 251
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI MY KC ++ +A+ +F ++ KDI SWNS+I+ + Q G + LF++M+ + PD
Sbjct: 252 LIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPD 311
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
+T V+ +C H + G+ M +GL + D V +LL
Sbjct: 312 LVTITTVLPACSHLAALMHGREIHGYMIINGLGKD-DENGAVDNLL 356
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 6/245 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV--R 199
+ SC +N+ G L I GF + +SLI +YSKC + +A VF + P R
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYD-PCHER 76
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
NV ++ AII+ F + Y+ MR + P+ +TF ++ C + + + H
Sbjct: 77 NVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCC---EVMEVKKIH 133
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
++MG + V ++L++ Y K G++E+A VF + +D+V WN+MI GYA+ G
Sbjct: 134 GCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLD 193
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
A+++F M + V P T G++S G ++ GK + K G + + ++
Sbjct: 194 EALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALI 253
Query: 380 DLLGR 384
D+ G+
Sbjct: 254 DMYGK 258
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF-NNMH 298
+ L +C L +G+ H I GF SLI+MY KCG + EA+ VF + H
Sbjct: 15 VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++ ++N++I+G+ +GLA + +++M + V PD TF V+ +C V E K
Sbjct: 75 ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCE---VMEVKK 131
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEP 418
+ K GL+ ++ S +V+ + G +E+A+ ++ I + V+W A
Sbjct: 132 IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSI-RDVVLWNA--------- 181
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
+ N YA + C D+A V + M KG+
Sbjct: 182 --------MINGYAKIGCLDEALEVFRRMHVKGV 207
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 202/350 (57%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV ++++T Y++ ++ +A VF+ MP ++ VSW A++AA++Q + L+L+ M
Sbjct: 191 NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMG 250
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N F +LS C AL G H + IR G+ V N+L++MY KCGN+E
Sbjct: 251 RCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNME 310
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A F M +D+VSWN+MIAGYA+HG A+++F+ M KPD IT +GV+++C
Sbjct: 311 DARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACS 370
Query: 349 HGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLVE+G YF SM G+ + +HY+C++DLLGRAG L EA D +K MP P++ +W
Sbjct: 371 HSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMW 430
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AAE LEPE A +V L+N+YA W A ++R +M+++
Sbjct: 431 GALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEER 490
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G+K PG SWIE+ N V+ F A D + +I L+ L +MK GYV
Sbjct: 491 GVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV 540
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
V+ S + +++C + G IR G+ +VG++L+ +Y KC + DA
Sbjct: 256 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 315
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
FEEM R+VVSW +IA +A+ LE++ MMR + +P+D T +L+AC+ SG +
Sbjct: 316 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 375
Query: 253 GQGRS 257
+G S
Sbjct: 376 EKGIS 380
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 132/271 (48%), Gaps = 19/271 (7%)
Query: 119 LISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
L + DL E+ V + + A G RG RT + +V ++L++
Sbjct: 24 LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARG-----LFNSRTEW--DVISWNALMS 76
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
Y + + +A ++F+ MP R+VVSW +++ +A+ + DM +E R+ + + + FT
Sbjct: 77 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR--RGDM-VEARRLFDAAPVR-DVFT 132
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+T+++S +G L + R S+ N++++ Y + ++EA +FN M
Sbjct: 133 WTAVVSGYAQNGMLEEARRVFDAMPERNAVSW----NAMVAAYIQRRMMDEAKELFNMMP 188
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++ SWN+M+ GYAQ G+ A +F+ M ++ DA+++ ++++ GG EE
Sbjct: 189 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEETLQ 244
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
F M + G ++CV+ LE
Sbjct: 245 LFIEMGRCGEWVNRSAFACVLSTCADIAALE 275
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MPVR+ V++ +I++ A V + + + E + ++ +L+A +G + +
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAP----EKDAVSWNGMLAAYVRNGRVEEA 56
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R S+ N+L+S Y + G + EA +F+ M G+D+VSWN M++GYA+
Sbjct: 57 RGLFNSRTEWDVISW----NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARR 112
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD-- 373
G V A LF+ + D T+ V+S G++EE + FD+M PE +
Sbjct: 113 GDMVEARRLFDAAPVR----DVFTWTAVVSGYAQNGMLEEARRVFDAM------PERNAV 162
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMP 399
++ +V + +++EA++ MP
Sbjct: 163 SWNAMVAAYIQRRMMDEAKELFNMMP 188
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 119/234 (50%), Gaps = 17/234 (7%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+I+ ++ ++ A F+ P ++ VSW ++AA+ + +V+ L+ NS E +
Sbjct: 12 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWD 67
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++ +++S G + + R + S+ N ++S Y + G++ EA +F+
Sbjct: 68 VISWNALMSGYVQWGKMSEARELFDRMPGRDVVSW----NIMVSGYARRGDMVEARRLFD 123
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+D+ +W ++++GYAQ+G+ A +F+ M ++ +A+++ ++++ +++E
Sbjct: 124 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDE 179
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K F+ M + ++ ++ +AG+LEEA+ MP +AV W A
Sbjct: 180 AKELFNMMPCRNVAS----WNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAA 228
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 218/385 (56%), Gaps = 19/385 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+T ++ +T + G I T + + VG+SL+ +Y+KC +A +F +
Sbjct: 354 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 413
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+ V WTA+I+A+ Q+ + L+L+ MR + + + TF S+L A +L G+
Sbjct: 414 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 473
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ GF S + ++L+ +Y KCG++++AV F M ++IVSWN+MI+ YAQ+G
Sbjct: 474 LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGE 533
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A + F+EM+ ++PD+++FLGV+S+C H GLVEEG +F+SM + + L P +HY+
Sbjct: 534 AEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA 593
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEP- 418
VVD+L R+G EA + +MPI P+ ++W AA+ +E
Sbjct: 594 SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEEL 653
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
AA +V ++N+YA W+ ++V K M+D+G+K P SW+EI + + F A D+ +
Sbjct: 654 RDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHP 713
Query: 479 RLSEILPVLDFLVDQMKTLGYVPEV 503
++ EI +D L M+ LGY P+
Sbjct: 714 QIEEIRKKIDMLTKTMEELGYKPDT 738
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 148/307 (48%), Gaps = 1/307 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK +++ ++ LK + + + +I G I+T F+ NV+V ++L
Sbjct: 232 EKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNAL 291
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ YSK +IDA K+F+EMP ++ VS+ II+ +A + + +L+R ++ + +
Sbjct: 292 LDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQ 351
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F F ++LS + + GR H QTI S I V NSL+ MY KCG EEA +F N
Sbjct: 352 FPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTN 411
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ + V W +MI+ Y Q G + LF +M + V D TF ++ + + G
Sbjct: 412 LTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLG 471
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
K + K G + S ++D+ + G +++A ++MP N V W A S
Sbjct: 472 KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPD-RNIVSWNAMISAYAQ 530
Query: 417 EPECAAT 423
E AT
Sbjct: 531 NGEAEAT 537
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 4/233 (1%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N + +I+ Y K + +A K+F+ M R V+WT +I ++Q Q EL+ M+
Sbjct: 82 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 141
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
EP+ TF ++LS C G Q Q I++G+ S + V N+L+ YCK ++
Sbjct: 142 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 201
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A +F M D VS+N+MI GY++ GL +A++LF EM +KP TF V+ C
Sbjct: 202 LACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CA 259
Query: 349 HGGL--VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ GL + G+ + K + + ++D + + +AR +MP
Sbjct: 260 NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP 312
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 25/275 (9%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + + + + D + ++ + + S ++ G I++GF++NV+ GS+L
Sbjct: 434 EEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSAL 493
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC I DA + F+EMP RN+VSW A+I+A+AQ + + L+ ++ M S L+P+
Sbjct: 494 LDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDS 553
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN---------SLISMYCKCGNV 287
+F +LSAC+ SG + +G F S Q+ S++ M C+ G
Sbjct: 554 VSFLGVLSACSHSGLVEEG--------LWHFNSMTQIYKLDPRREHYASVVDMLCRSGRF 605
Query: 288 EEAVYVFNNMH-GKDIVSWNSMIAG---YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
EA + M D + W+S++ + LA RA D M + R DA ++ +
Sbjct: 606 NEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELR---DAAPYVNM 662
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+ G E +M G+K +L YS V
Sbjct: 663 SNIYAAAGQWENVSKVHKAMRDRGVK-KLPAYSWV 696
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 1/252 (0%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
Q I+ G+ + + VG++L+ Y K + A ++F+EMP + VS+ A+I ++++
Sbjct: 172 QTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLD 231
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+ + L+ M+NS L+P +FTF ++L A G + G+ H I+ F + V+N+L
Sbjct: 232 EKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNAL 291
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ Y K +V +A +F+ M +D VS+N +I+GYA G A DLF E+
Sbjct: 292 LDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQ 351
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
F ++S + E G+ E+ + +VD+ + G EEA
Sbjct: 352 FPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTN 411
Query: 398 MPIYPNAVIWEA 409
+ + +AV W A
Sbjct: 412 L-THRSAVPWTA 422
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 31/171 (18%)
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG--- 316
+ ++ GF +N + + K G + +A +F M K+ VS N MI+GY + G
Sbjct: 41 ARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLG 100
Query: 317 ------------LAV----------------RAIDLFEEMMKQRVKPDAITFLGVISSCR 348
AV A +LF +M + +PD +TF+ ++S C
Sbjct: 101 EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCN 160
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + + K G L + +VD ++ L+ A K+MP
Sbjct: 161 GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP 211
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 218/382 (57%), Gaps = 18/382 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM- 196
L+ A+ +C + G A R G + YV + L+ LY+KC + A VF+ M
Sbjct: 131 LAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMV 190
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+N+ +W+A+I +++ V+ L L+R M+ + + P++ T S++SAC +GAL GR
Sbjct: 191 GDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGR 250
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H R G ++++ +LI MY KCG +E A VF+ M +D +W++MI G A HG
Sbjct: 251 WVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHG 310
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
L A+ LF M++ +V+P+ +TF+GV+S+C H GLV EG+ Y+ +M + G+KP +++Y
Sbjct: 311 LVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPSMENYG 370
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPE 419
C+VDL R+ LL+EA F+ M I PN+VIW ++A +LL LEP
Sbjct: 371 CMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPC 430
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+V L+NLYA WD+ + +RK MK+ + GCS IEI +++F D S+
Sbjct: 431 NPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEINGYLHKFVVSDDSHPE 490
Query: 480 LSEILPVLDFLVDQMKTLGYVP 501
+ EI +L + D++ G+ P
Sbjct: 491 IKEIRLLLREIADRVVRAGHKP 512
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 5/215 (2%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQV----DMCLELYRMMRNSMLEPNDFTFTSILS 244
A +F+++P + ++I A + V D L RM+R PN FT L
Sbjct: 77 ARNLFDQIPEPTAFCYNSLIRALSSAAGVAPAADTVLVYRRMLRAGSPLPNSFTLAFALK 136
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIV 303
AC+ ALG+GR H Q R G V L+++Y KC V A VF+ M G K++
Sbjct: 137 ACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNLA 196
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+W++MI GY++ G+ A+ LF EM V PD +T + VIS+C G ++ G+ +
Sbjct: 197 AWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFI 256
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ G+ +L+ + ++D+ + GL+E A+ M
Sbjct: 257 DRKGITVDLELSTALIDMYAKCGLIERAKGVFDAM 291
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + + ++ + D + + +++C + G R G ++ + ++
Sbjct: 211 VNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTA 270
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y+KC +I A VF+ M R+ +W+A+I A V++ L+L+ M + PN
Sbjct: 271 LIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPN 330
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+ TF +LSAC SG + +GR +G ++ ++ ++C+ ++EA
Sbjct: 331 NVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPSMENYGCMVDLFCRSSLLDEAYSFVT 390
Query: 296 NMH-GKDIVSWNSMI 309
M + V W +++
Sbjct: 391 GMAIPPNSVIWRTLL 405
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 224/430 (52%), Gaps = 42/430 (9%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+++++ + E K ++S +++ + + + G +R GF +VYVG+SL
Sbjct: 893 EEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSL 952
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR-------- 228
I +Y K + A VF+ M RN+ +W ++++ ++ + + L L M
Sbjct: 953 IDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDL 1012
Query: 229 ---NSMLE-------------PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
N M+ PN + T +L AC L +G+ HC +IR GF +
Sbjct: 1013 VTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVF 1072
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
VA +LI MY K +++ A VF + K + SWN MI G+A GL AI +F EM K
Sbjct: 1073 VATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVG 1132
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEA 391
V PDAITF ++S+C++ GL+ EG YFDSM + + P L+HY C+VDLLGRAG L+EA
Sbjct: 1133 VGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEA 1192
Query: 392 RDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGV 434
D I MP+ P+A IW AA++ LEP +A ++ + NLY+
Sbjct: 1193 WDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIF 1252
Query: 435 RCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
W+ +R+LM G++ SWI+I V+ F +++K + +I L LV +M
Sbjct: 1253 NRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEM 1312
Query: 495 KTLGYVPEVH 504
K LGYVP+V+
Sbjct: 1313 KKLGYVPDVN 1322
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 137/302 (45%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNI 151
+ G + N F + + + ++ + +LH + + D+ S A+ +C +I
Sbjct: 631 YVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDI 690
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
G I+ GF +VY+ +L+ Y +C + A +VF EMP + W I
Sbjct: 691 WLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILN 750
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
Q ++ +EL+R M+ S L+ T +L AC GAL + H R G S +
Sbjct: 751 LQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDV 810
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
+ N LISMY K G +E A VF++M ++ SWNSMI+ YA G A LF E+
Sbjct: 811 SLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESS 870
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+KPD +T+ ++S G EE M G KP + V+ + G L
Sbjct: 871 DMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMG 930
Query: 392 RD 393
++
Sbjct: 931 KE 932
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Query: 199 RNVVSWTAIIAAF-AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RN + W + + F + + + LE+++ + + + ++ L CT + G
Sbjct: 636 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 695
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ GF + + +L++ Y +C +E+A VF+ M + + WN I Q
Sbjct: 696 IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEK 755
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ ++LF +M +K + T + V+ +C G + K + + GL ++ +
Sbjct: 756 LQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNP 815
Query: 378 VVDLLGRAGLLEEARDFIKQM 398
++ + + G LE AR M
Sbjct: 816 LISMYSKNGKLELARRVFDSM 836
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR-AIDLFEEMMKQR 332
A +LIS Y G+ A VF ++ + WNS + + ++ +++F+E+ +
Sbjct: 610 AKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 669
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
V D+ + + +C + G + K G ++ +++ GR LE+A
Sbjct: 670 VVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN 729
Query: 393 DFIKQMPIYPNAVIWEAA 410
+MP P A++W A
Sbjct: 730 QVFHEMP-NPEALLWNEA 746
>gi|242055215|ref|XP_002456753.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
gi|241928728|gb|EES01873.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
Length = 521
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 212/368 (57%), Gaps = 21/368 (5%)
Query: 169 NVYVGSSLITLYSKCRVI---IDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
+++V ++L+ Y++ A VF+EMP R+VV+WT+++ A+ + Y
Sbjct: 79 HLHVANALVDAYARLPCAGGAATARAVFDEMPRRDVVTWTSLLTGLARAGAHAAAVRAYH 138
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M + ++ ++F ++LS+C GS AL GRS H + +G + V NSL+SMY K G
Sbjct: 139 GMVAAGVQTDEFAVAAVLSSCAGSTALDVGRSVHAAAVHLGLCPFRSVGNSLVSMYAKTG 198
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
+ +A VF+ M + ++W ++I GYAQ+G R+++++ +M++ +PD +TF+G++
Sbjct: 199 ALHDARAVFDAMPARCTITWTALIVGYAQNGRGRRSLEVYTDMVRSGCRPDYVTFIGLLF 258
Query: 346 SCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C H GLV+ G+ +F SMA +G+ P DHY+C+VDLLGRAG L+EA D + + +A
Sbjct: 259 ACSHAGLVDAGRDHFRSMAVDYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDA 318
Query: 405 VIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
+W+ AAE L+P A +V L+NLY+ R W AR+R LM
Sbjct: 319 TVWKSLLGACRVHRNAELAERAAEMVWRLDPTDAVPYVMLSNLYSRARRWGDVARIRALM 378
Query: 448 KDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEK 507
K +G+ PGCSW+ + V + F ED+ + R +EI ++ + ++++ GYVP+
Sbjct: 379 KARGITKEPGCSWVGVNGVTHLFHVEDRGHPRAAEIYRKVEEMTERIRAEGYVPDTDWAL 438
Query: 508 VDDASHKR 515
D+A R
Sbjct: 439 QDEAPEGR 446
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 207/348 (59%), Gaps = 19/348 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++++T Y+ + DA ++F+ +P ++ + W A+I + Q + + L+L+R M S E
Sbjct: 189 TAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAE 248
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVY 292
P++ T +LSA G + G+ H ++VA +L+ MYCKCG++E+AV
Sbjct: 249 PDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVA 308
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF+ + KDIV WN+MI GYA HG + +A+++F ++ Q + P ITF+G++++C H GL
Sbjct: 309 VFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGL 368
Query: 353 VEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAE 411
VEEG+ +F SM ++G+ P+++HY C+VDLLGRAGL+EEA ++ + I P+AV+W +
Sbjct: 369 VEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLL 428
Query: 412 SRLLLEPECA-----------------ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
+ L A ++ L+N+YA V W++ ARVR +MK G++
Sbjct: 429 AACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQK 488
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PGCS IEI VY F A D S+ EI +LD + +K G+VP+
Sbjct: 489 EPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQ 536
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 38/222 (17%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L L M + L P T ++ L AC G L GR+ H ++ VA +L+SM
Sbjct: 107 LALLSDMLSEGLLPTAHTLSASLPACRG---LSLGRALHAYAFKLALSGDSYVATALLSM 163
Query: 281 Y-------------------------------CKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
Y G +++A +F+ + KD + WN+MI
Sbjct: 164 YARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMI 223
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
GY QHG A+ LF M++ +PD +T + V+S+ G VE GK + S K+
Sbjct: 224 DGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGK-WLHSYVKNSRC 282
Query: 370 PELD--HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+L+ + +VD+ + G LE+A + + V+W A
Sbjct: 283 VQLNVRVATALVDMYCKCGSLEDAVAVFHGIG-NKDIVVWNA 323
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 129/343 (37%), Positives = 206/343 (60%), Gaps = 20/343 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPV-RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
+G SL+ +Y KC+++ DA K+ E+P +N+V WTA I+ +AQ D L ++ MR+
Sbjct: 668 LGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSH 727
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ ++ TF S+L AC+ AL G+ H I+ GF SY A++L+ MY KCG+V +
Sbjct: 728 DVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISS 787
Query: 291 VYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
+F + K +I+ WNSMI G+A++G A A+ LF++M + ++KPD +T LGV+ +C H
Sbjct: 788 FEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSH 847
Query: 350 GGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
GL+ EG+ FDSM++ +G+ P +DHY+C++DLLGR G L+EA++ I Q+P + VIW
Sbjct: 848 AGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWA 907
Query: 409 -----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKG 451
AA+ + +EP+ ++T+V L++L+A W +A R+ M++KG
Sbjct: 908 TFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKG 967
Query: 452 LKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
+ PGCSWI + N F +D + I +LD L M
Sbjct: 968 VMKFPGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDLTGMM 1010
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 149/281 (53%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
++ ++ D+ R+ L S ++ +++ S G A++ G ANV+VGSSLI
Sbjct: 310 EVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLI 369
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
LY K I DA KVF+ +N+V W A++ F Q + +++++ MR + LE +DF
Sbjct: 370 NLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDF 429
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF S+L AC +L GR HC TI+ + + VAN+++ MY K G ++ A +F+ +
Sbjct: 430 TFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLI 489
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
GKD VSWN++I G A + A+ + + M + PD ++F I++C + E GK
Sbjct: 490 PGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGK 549
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ K+ + S ++DL + G +E +R + +
Sbjct: 550 QIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHV 590
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 148/298 (49%), Gaps = 9/298 (3%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ I M + R L+ D + + +C + ++ G C+ I+ A+++V +++
Sbjct: 410 EETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAM 469
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +YSK I A +F +P ++ VSW A+I A + + + + + M+ + P++
Sbjct: 470 LDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDE 529
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
+F + ++AC+ A G+ HC +I+ S V +SLI +Y K G+VE + V +
Sbjct: 530 VSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAH 589
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ +V N++I G Q+ AI+LF++++K KP TF ++S C G V
Sbjct: 590 VDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCT--GPVSS- 646
Query: 357 KVYFDSMAKHGLKPEL--DHYSCVVDLLG---RAGLLEEARDFIKQMPIYPNAVIWEA 409
V + + LK L S + L+G + LLE+A + ++P + N V W A
Sbjct: 647 -VIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTA 703
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 121/232 (52%), Gaps = 2/232 (0%)
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
TL S R + DA + + + + + V+W A+I++++Q LY+ M+ L P
Sbjct: 270 TLASMGR-LSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRS 328
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF S+LSA A +G+ H ++ G + + V +SLI++Y K G + +A VF+
Sbjct: 329 TFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFS 388
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
K+IV WN+M+ G+ Q+ L I +F+ M + ++ D TF+ V+ +C + ++ G+
Sbjct: 389 TEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGR 448
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K+ + +L + ++D+ + G ++ A+ +P ++V W A
Sbjct: 449 QVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIP-GKDSVSWNA 499
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE--EMPVRNVVSWT 205
T R +R G +G +L+ LY + + A++ + + +
Sbjct: 69 THQARACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAAS 128
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSML-EPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
++++ A+ L+ ++ +R S+ P+ F +LSAC+ GAL QGR HC ++
Sbjct: 129 SVLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLK 188
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
GF S L+ MY KC V++A VF+ + D + W SMIAGY + G +A+ L
Sbjct: 189 SGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALAL 248
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F M K PD +T++ +IS+ G + + + ++ K P ++ V+ +
Sbjct: 249 FSRMEKMGSAPDQVTYVTIISTLASMGRLSDAR----TLLKRIQMPSTVAWNAVISSYSQ 304
Query: 385 AGLLEEARDFIKQM 398
+GL E K M
Sbjct: 305 SGLESEVFGLYKDM 318
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 119/272 (43%), Gaps = 36/272 (13%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ +++C + G C +++GF ++ + + L+ +Y+KC + DA +VF+ +
Sbjct: 163 LAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIA 222
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ + W ++IA + + + L L+ M P+ T+ +I+S G L R+
Sbjct: 223 CPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDART 282
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
IQ+ ++ V+WN++I+ Y+Q GL
Sbjct: 283 ---------LLKRIQMPST--------------------------VAWNAVISSYSQSGL 307
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
L+++M +Q + P TF ++S+ +EG+ + KHGL + S
Sbjct: 308 ESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSS 367
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+++L + G + +A+ + N V+W A
Sbjct: 368 LINLYVKHGCISDAKK-VFDFSTEKNIVMWNA 398
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 122/244 (50%), Gaps = 10/244 (4%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D + ++ + +C + G L I++GF++ S+L+ +YSKC +I ++
Sbjct: 729 VRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSF 788
Query: 191 KVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGS 249
++F+E+ + N++ W ++I FA+ + L L++ M+ S L+P++ T +L AC+ +
Sbjct: 789 EIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHA 848
Query: 250 GALGQGRSAHCQTIRM-GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNS 307
G + +GR+ ++ G + LI + + G+++EA V + + + D V W +
Sbjct: 849 GLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWAT 908
Query: 308 MIAGYAQHGLAVR---AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
+A H R A EM QR + T++ + S G E KV ++M
Sbjct: 909 FLAACQMHKDEERGKVAAKKLVEMEPQR----SSTYVFLSSLHAAAGNWVEAKVAREAMR 964
Query: 365 KHGL 368
+ G+
Sbjct: 965 EKGV 968
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 214/360 (59%), Gaps = 19/360 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
VGS+L+ +Y KC I +A +VF+ + +++V+W A+I +AQ + + L+ MR +
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAG 350
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+ T +LSAC+ GAL G R G +S + V +L+ MY KCG++++A+
Sbjct: 351 MRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAI 410
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHG 350
VF M K++ SWN++I G A +G AI F+ M + +KPD ITF+GV+S+C H
Sbjct: 411 EVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHA 470
Query: 351 GLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV---- 405
GLV++GK +F+S+ + + P+++HYSC+VDLL R+G LEEA DFI+++P +AV
Sbjct: 471 GLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGA 530
Query: 406 ------------IWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
I E +R++ LEP + +V + +YA D +A++R LM+++G+
Sbjct: 531 LLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGV 590
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDAS 512
PGCSW+E+ V F A D+ ++ VLD LVD+M+ GYVP + E + AS
Sbjct: 591 NKTPGCSWVEVSGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLEGYVPNLDVEVLPWAS 650
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 132/241 (54%), Gaps = 12/241 (4%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE- 233
SLIT+YS A KVF+ +P R+VVSW A++ A+ +V M E+ RM R+ + E
Sbjct: 192 SLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYG---RVGMNGEVGRMFRDMVKEG 248
Query: 234 ---PNDFTFTSILSACTGSGALGQGRSAH--CQTIRMGFFSYIQVANSLISMYCKCGNVE 288
PN T +L+AC G L GR + RM S V ++L+ MY KCG +
Sbjct: 249 TVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL--VGSALLGMYEKCGEIA 306
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA VF+ + KDIV+WN+MI GYAQ+G++ AI LF M ++PD IT GV+S+C
Sbjct: 307 EARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACS 366
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
G +E G ++ GL + + +VD+ + G L++A + ++MP N W
Sbjct: 367 AVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPC-KNVASWN 425
Query: 409 A 409
A
Sbjct: 426 A 426
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 104 VFDQLLDTPVVDVEKLI-------------SMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD ++D +V +I S+ H + ++ D L+ +++C +
Sbjct: 311 VFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGA 370
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G+ A R G +NVYVG++L+ +Y+KC + A +VF +MP +NV SW A+I
Sbjct: 371 LELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICG 430
Query: 211 FAQEWQVDMCLELYRMMRNSM-LEPNDFTFTSILSACTGSGALGQG-RSAHCQTIRMGFF 268
A + D ++ +++MRN L+P+D TF +LSAC +G + G R + T
Sbjct: 431 LAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQII 490
Query: 269 SYIQVANSLISMYCKCGNVEEA 290
I+ + ++ + + G++EEA
Sbjct: 491 PKIEHYSCMVDLLARSGHLEEA 512
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L L+ M S + P+ +T +L A A R+AH ++G + +SLI+M
Sbjct: 137 LRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITM 196
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAIT 339
Y + A VF+ + +D+VSWN+M+ Y + G+ +F +M+K+ V P+ +T
Sbjct: 197 YSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVT 256
Query: 340 FLGVISSCRHGGLVEEGK 357
V+++CR G + G+
Sbjct: 257 VAVVLAACRDQGDLVLGR 274
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 218/382 (57%), Gaps = 18/382 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM- 196
L+ A+ +C + G A R G + YV + L+ LY+KC + A VF+ M
Sbjct: 134 LAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMV 193
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+N+ +W+A+I +++ V+ L L+R M+ + + P++ T S++SAC +GAL GR
Sbjct: 194 GDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGR 253
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H R G ++++ +LI MY KCG +E A VF+ M +D +W++MI G A HG
Sbjct: 254 WVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHG 313
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
L A+ LF M++ +V+P+ +TF+GV+S+C H GLV EG+ Y+ +M + G+KP +++Y
Sbjct: 314 LVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPSMENYG 373
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPE 419
C+VDL R+ LL+EA F+ M I PN+VIW ++A +LL LEP
Sbjct: 374 CMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPC 433
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+V L+NLYA WD+ + +RK MK+ + GCS IEI +++F D S+
Sbjct: 434 NPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEINGYLHKFVVSDDSHPE 493
Query: 480 LSEILPVLDFLVDQMKTLGYVP 501
+ EI +L + D++ G+ P
Sbjct: 494 IKEIRLLLREIADRVVRAGHKP 515
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 5/215 (2%)
Query: 189 AYKVFEEMPVRNVVSWTAII----AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
A +F+++P + ++I +A D L RM+R PN FT L
Sbjct: 80 ARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSFTLAFALK 139
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIV 303
AC+ ALG+GR H Q R G V L+++Y KC V A VF+ M G K++
Sbjct: 140 ACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNLA 199
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+W++MI GY++ G+ A+ LF EM V PD +T + VIS+C G ++ G+ +
Sbjct: 200 AWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFI 259
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ G+ +L+ + ++D+ + GL+E A+ M
Sbjct: 260 DRKGITVDLELSTALIDMYAKCGLIERAKGVFDAM 294
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + + ++ + D + + +++C + G R G ++ + ++
Sbjct: 214 VNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTA 273
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y+KC +I A VF+ M R+ +W+A+I A V++ L+L+ M + PN
Sbjct: 274 LIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPN 333
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+ TF +LSAC SG + +GR +G ++ ++ ++C+ ++EA
Sbjct: 334 NVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPSMENYGCMVDLFCRSSLLDEAYSFVT 393
Query: 296 NMH-GKDIVSWNSMI 309
M + V W +++
Sbjct: 394 GMAIPPNSVIWRTLL 408
>gi|359491319|ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400-like [Vitis vinifera]
Length = 482
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 217/412 (52%), Gaps = 45/412 (10%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L + +D+ L A+ +C ++ G L I GF +++ +SLI++YS
Sbjct: 61 LRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGN 120
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA+ +F+E+P +N++SWT++I+A+ + + L+L+R M+ ++P+ T T LSA
Sbjct: 121 VADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSA 180
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C GAL G H G + + + NSLI+MY KCG + A +F+ KD+ +W
Sbjct: 181 CADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTW 240
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQR----------------VKPDAITFLGVISSCRH 349
SMI G+A HG A A+ LF EM + V P+ +TF+GV+ +C H
Sbjct: 241 TSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEHESSLVLPNDVTFMGVLMACSH 300
Query: 350 GGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW- 407
GLVEEGK +F SM + + L+P + H+ C+VDLL RAGLL EA +FI +MP+ PNAV+W
Sbjct: 301 AGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWR 360
Query: 408 ------------------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
EA L LEP +V ++NLYA WD+ V
Sbjct: 361 TLLGACSLQGDSNGNGNSNIKIYSEARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLV 420
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
R +K + +PGCS IE+ + F A D + + +I +LD L M+
Sbjct: 421 RNQIKQ---RRDPGCSSIEVGIDIKEFVAADDQHPCMPQIYEILDHLTRTMR 469
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 211 FAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+ Q L +R ++R + + F+ L ACT +L +G+ H I GF
Sbjct: 44 YLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEP 103
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
I + SLISMY GNV +A +F+ + K+++SW S+I+ Y + +A+ LF +M
Sbjct: 104 IIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQ 163
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
V+PD +T +S+C G ++ G+ + GL +L + ++++ + G +
Sbjct: 164 MDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIG 223
Query: 390 EAR 392
AR
Sbjct: 224 TAR 226
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 230/443 (51%), Gaps = 39/443 (8%)
Query: 97 STFGSSNVFDQLLDTPVV--------------DVEKLISMHHDLHRERLKVDASFLSTAV 142
S F SS + +Q D P + E+ ++ + + +D L T
Sbjct: 397 SAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVF 456
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+CGS+ ++ G L + V ++L+T+Y++ + DA ++F+ M RNV+
Sbjct: 457 NACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVI 516
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLE---PNDFTFTSILSACTGSGALGQGRSAH 259
SWTA++ + Q+ + E R+ R+ +LE PN+ TFT++L+AC ++ +
Sbjct: 517 SWTAMVGVHS---QLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQ 573
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
GFF ++VAN L+ KCG++EE F M K+ VSWN+ IA AQHG V
Sbjct: 574 ACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGV 633
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCV 378
R ++LF+ M + + ++T +GV+SSC H GLV +G YF +M +G E +HYSCV
Sbjct: 634 RGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCV 693
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVI-W-----------------EAAESRLLLEPEC 420
+DLL RAG LE A +F+K++P +V W A + L L P
Sbjct: 694 IDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGS 753
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
++ + NLYAG W +AA VRK M + G K PG SWIE+ ++ FR D S+ R
Sbjct: 754 TGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRS 813
Query: 481 SEILPVLDFLVDQMKTLGYVPEV 503
SEI L+ L ++MK G+V ++
Sbjct: 814 SEIHRELERLNEEMKRAGFVCDI 836
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGF---IANVYVGSSLITLYSKCRVIIDAYK----VFE 194
+ +C +++ G + LA+ G +V +G++++ +YS+C+ A+ + +
Sbjct: 348 LNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQ 407
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
+ +++ W +++ + + Q + ++R+M + + + ++ +AC S +L +
Sbjct: 408 DRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEK 467
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+ H V N+L++MY + G++E+A +F+ M ++++SW +M+ ++Q
Sbjct: 468 GKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQ 527
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
GL A+ +F ++ + V P+ +TF V+++C + + K+ +++ G ++
Sbjct: 528 LGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEV 587
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA 410
+ ++ LG+ G LEE +F + M + N V W A
Sbjct: 588 ANGLLCTLGKCGSLEEVANFFQVMAV-KNQVSWNTA 622
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 137/284 (48%), Gaps = 19/284 (6%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
DAS + + C ++ G L +R G ++G+ L+ +Y KC +A VF
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ + ++VV+WT++I A+ L+R M+ + PND T+ ++L AC +
Sbjct: 99 QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158
Query: 254 --QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ R C ++ + + VA ++++ Y KCG+++ A VF+ + +D WN+MI+
Sbjct: 159 TIRARVEACGSLELD----VIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISL 214
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
H A++LF +M V P+ T + +++C H + + +++ H E
Sbjct: 215 LVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCH------SRDFSEALRIHAFARE 268
Query: 372 LDH------YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L + +V++ G+ G +++A + +++ + V W A
Sbjct: 269 LAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQ-ERDVVSWNA 311
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 12/213 (5%)
Query: 154 GAPYQCLAIRTGFIA------NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
G P++ IR A +V V ++++ Y KC + A+ VF+ + VR+ W A+
Sbjct: 152 GHPWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAM 211
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ Q D LEL+R MR + PN T + L+AC S + H +
Sbjct: 212 ISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAG 271
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ V +L++MY K G V++A +F + +D+VSWN+M+ A +G +A F E
Sbjct: 272 DADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFRE 331
Query: 328 MMKQRVKPDAITFLGVISSC------RHGGLVE 354
M+ P IT++ ++++C +HG V+
Sbjct: 332 MLLVGELPSRITYVAILNACFLAAHLKHGDFVK 364
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
TF +++ C L QGR H +R G + L++MYCKCG+ EEA VF +
Sbjct: 42 TFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGI 101
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
K +V+W S+I A+ G A LF EM Q V P+ +T++ V+ +C H V+ +
Sbjct: 102 QDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIR 161
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL 415
++ L+ ++ + V++ G+ G L+ A + + +A +W A S L+
Sbjct: 162 ARVEACGS--LELDVIVATAVMNAYGKCGDLDSAWGVFDGI-LVRDAAVWNAMISLLV 216
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 8/277 (2%)
Query: 140 TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR 199
A+ +C +R+ A A+ V ++L+ +Y K + DA ++FE + R
Sbjct: 245 AALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQER 304
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+VVSW A++ A A D + +R M P+ T+ +IL+AC + L G
Sbjct: 305 DVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVK 364
Query: 260 CQTIRMGFFSY---IQVANSLISMYCKCGNVEEA----VYVFNNMHGKDIVSWNSMIAGY 312
+ G + + ++++MY +C + + A + + + I+ WN++++ Y
Sbjct: 365 TLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLY 424
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
++ A +F M+ V D ++ + V ++C +E+GK + + L +
Sbjct: 425 VENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKT 484
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +V + R G LE+AR+ M N + W A
Sbjct: 485 PVQNALVTMYARLGSLEDAREIFDAMTTR-NVISWTA 520
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 212/396 (53%), Gaps = 18/396 (4%)
Query: 111 TPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV 170
T +E + + + E +++D S + C + G ++ G + V
Sbjct: 265 TQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEV 324
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
VG+ L+ Y KC I AY+ F + N VSW+A+I+ F+Q +++ C++++ +R+
Sbjct: 325 SVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSE 384
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ N F +TS+ AC L G AH I+ G SY+ +++++MY KCG ++ A
Sbjct: 385 GVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYA 444
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
F ++ D V+W ++I+GYA HG A A+ F M V+P+A+TF+ V+++C H
Sbjct: 445 RRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHS 504
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE- 408
GLV E K Y SM++ +G+KP +DHY C++D RAGLL+EA + I +MP P+A+ W+
Sbjct: 505 GLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKS 564
Query: 409 ----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
AAE+ L+P A ++ L NLY+ W++A VRKLM ++ L
Sbjct: 565 LLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAEREL 624
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
K CSWI + V+RF D+ + + I L+
Sbjct: 625 KKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLE 660
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 159/356 (44%), Gaps = 17/356 (4%)
Query: 70 RLIQDFLQTDSKHLDSQKFN---HDFTGTNSTFGSSNVFDQLLDTPVV------------ 114
RLI D L+ K+ N + S VFD++L +V
Sbjct: 107 RLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKN 166
Query: 115 -DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
++EK I + D+ ++ +++ + + SC + G IR AN+ V
Sbjct: 167 GELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVE 226
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++ +Y +C + A VF+ M +N V+WT ++ + Q ++++ LEL+ M +E
Sbjct: 227 TAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVE 286
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
++F F+ +L C G GR H +++G S + V L+ Y KCG++E A
Sbjct: 287 LDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRS 346
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F + + VSW+++I+G++Q G I +F + + V ++ + V +C +
Sbjct: 347 FGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANL 406
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
G K GL L S +V + + G L+ AR + + P+AV W A
Sbjct: 407 NMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTA 461
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 210/374 (56%), Gaps = 24/374 (6%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGF----IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
C S G C ++ G ++V++GSSLI +YS+ ++ + +VF++M RN
Sbjct: 243 CDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRN 302
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+ WTA+I + Q + L L+R M R + PN + S+L AC L G+ H
Sbjct: 303 IYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVH 362
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN-MHGKDIVSWNSMIAGYAQHGLA 318
+I+M F YI + N+LI MY KCG+++ A VF+N + KD ++W+S+I+ Y HG
Sbjct: 363 AFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKG 422
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSC 377
A+ + EM++Q +KPD IT +GV+S+C GLV+EG ++S+ ++ +KP ++ C
Sbjct: 423 QEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGC 482
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPEC 420
VVDLLGR+G L++A DFI++MPI P +W A L LEPE
Sbjct: 483 VVDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPEN 542
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+ ++ L+N YA R WD+ VR +MK++GL+ PG SWI I + + F DK +
Sbjct: 543 PSNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWITISDKNHFFTVADKVHPSS 602
Query: 481 SEILPVLDFLVDQM 494
S I +LD LV M
Sbjct: 603 SSIYEMLDDLVSIM 616
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 145/291 (49%), Gaps = 19/291 (6%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L+T G +++ G ++R GF++++ VG+S++++Y +CR DA KVF
Sbjct: 125 DDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVF 184
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCL-----ELYRMMRNSMLEPNDFTFTSILSACTG 248
+EMP RNV S+ II+ A +D L +R M+ + FT S+L C
Sbjct: 185 DEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCD 244
Query: 249 S-GALGQGRSAHCQTIRMGF----FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
S G GR HC ++ G S + + +SLI MY + + + VF+ M ++I
Sbjct: 245 SDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIY 304
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
W +MI GY Q+G A+ LF EM K R++P+ ++ + V+ +C G LV G +
Sbjct: 305 VWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPAC--GLLV--GLMGGKQ 360
Query: 363 MAKHGLKPELDHY----SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +K E + Y + ++D+ + G L+ AR +A+ W +
Sbjct: 361 VHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSS 411
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 12/254 (4%)
Query: 166 FIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
F N ++ + LI+ Y+ I + VF+ + +NV W ++I + + Q D + L+R
Sbjct: 57 FSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFR 116
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M +L P+D+T +I L G+ H +++R+GF S I V NS++SMY +C
Sbjct: 117 QMGRCLL-PDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCR 175
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG-----LAVRAIDLFEEMMKQRVKPDAITF 340
+A+ VF+ M +++ S+N +I+G A G L + F M Q DA T
Sbjct: 176 EFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTV 235
Query: 341 LGVIS-SCRHGGLVEEGKVYFDSMAKHGLK----PELDHYSCVVDLLGRAGLLEEARDFI 395
++ C G + G+ + K+GL ++ S ++D+ R+ L +R
Sbjct: 236 ASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVF 295
Query: 396 KQMPIYPNAVIWEA 409
QM N +W A
Sbjct: 296 DQMK-SRNIYVWTA 308
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
++R++ + L + + +CG + GG +I+ F + + ++LI +Y+KC +
Sbjct: 332 KDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLD 391
Query: 188 DAYKVFEEMPV-RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC 246
A +VF+ ++ ++W++II+A+ + L Y M ++P+ T +LSAC
Sbjct: 392 YARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSAC 451
Query: 247 TGSGALGQGRSAHCQ-TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM---HGKDI 302
SG + +G S + T +++ ++ + + G +++A+ M G +
Sbjct: 452 CRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSV 511
Query: 303 VSWNSMIAGYAQHG 316
W S++ HG
Sbjct: 512 --WGSLLTASVIHG 523
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H Q + F + LIS Y G+ + VF+++H K++ WNS+I GY ++
Sbjct: 49 HSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQF 108
Query: 319 VRAIDLFEEMMKQRVKPDAITF 340
AI LF +M + + PD T
Sbjct: 109 DNAIVLFRQMGRCLL-PDDYTL 129
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 211/352 (59%), Gaps = 19/352 (5%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
V ++L+ Y K ++++ +VF +P +++V+W+A++ AQ + +E++ +
Sbjct: 441 VATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEG 500
Query: 232 LEPNDFTFTSILSACTGSGA-LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
++PN++TF+S+++AC+ S A + G+ H ++ G + + V+++L++MY K GN+E A
Sbjct: 501 VKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESA 560
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF +DIVSWNSMI GY QHG A +A+++F+ M Q + D +TF+GV+++C H
Sbjct: 561 EKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHA 620
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE- 408
GLVEEG+ YF+ M K + + + +HYSC+VDL RAG+ ++A D I MP + IW
Sbjct: 621 GLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRT 680
Query: 409 ----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
AAE + L+P A +V L+N++A W++ A VRKLM ++ +
Sbjct: 681 LLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKV 740
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
K GCSWIEI N ++ F A D S+ + L+ L ++K +GY P+ +
Sbjct: 741 KKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTN 792
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 133/285 (46%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
DLH L VD LS A+ CG + G C ++++GF+ +V VG+SL+ +Y K
Sbjct: 94 DLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTE 153
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
D +F+EM ++NVVSWT++++ +A+ D + L M+ + PN FTF ++L
Sbjct: 154 DFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLG 213
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
A + G H ++ GF V N+LI MY K V +A VF++M +D V+
Sbjct: 214 ALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVT 273
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN MI GYA G + +F M VK F + C + K +
Sbjct: 274 WNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVV 333
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K+G + D + ++ + ++EA N V W A
Sbjct: 334 KNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTA 378
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 141/278 (50%), Gaps = 10/278 (3%)
Query: 126 LHRERL---KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
HR RL K+ + TA+ C R + C ++ G+ + ++L+ YSK
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 183 CRVIIDAYKVFEEM-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTS 241
C + +A+K+F NVV+WTA+I F Q ++L+ M + PN FT+++
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYST 413
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+L A S L Q H Q I+ + VA +L+ Y K GNV E+ VF ++ KD
Sbjct: 414 VL-AGKPSSLLSQ---LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC-RHGGLVEEGKVYF 360
IV+W++M+ G AQ + +A+++F +++K+ VKP+ TF VI++C VE GK
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD-FIKQ 397
+ K G L S ++ + + G +E A F +Q
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ 567
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 117/231 (50%), Gaps = 1/231 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+++I + + + E + + +T + + I GG + ++ GF +V ++L
Sbjct: 187 DEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNAL 246
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y K ++ DA VF+ M VR+ V+W +I +A +++ MR + ++ +
Sbjct: 247 ICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSR 306
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F + L C+ L + HC ++ G+ + +L+ Y KC +V+EA +F+
Sbjct: 307 TVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSM 366
Query: 297 MH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++V+W +MI G+ Q+ +A+DLF +M ++ V+P+ T+ V++
Sbjct: 367 ADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAG 417
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVG 173
D EK + + L +E +K + S+ + +C S+ + G A+++G + V
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVS 544
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
S+L+T+YSK I A KVF R++VSW ++I + Q LE++++M+N L
Sbjct: 545 SALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLP 604
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVY 292
+D TF +L+ACT +G + +G I+ + + ++ +Y + G ++A+
Sbjct: 605 LDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMD 664
Query: 293 VFNNM 297
+ N M
Sbjct: 665 IINGM 669
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 245/505 (48%), Gaps = 101/505 (20%)
Query: 104 VFDQLLDTPVV-------------DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VF ++L+ VV V K ++M H + E L+ D+ LS+ +++ T N
Sbjct: 1435 VFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSN 1494
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR----------- 199
I+ G C IR ++V V +S+I +Y+KC I DA KVF+ R
Sbjct: 1495 IKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAA 1554
Query: 200 ------------------------NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
NV+SW ++I F + QV+ +++ M++ +PN
Sbjct: 1555 YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPN 1614
Query: 236 DFTFTSILS-----------------------------------ACTGSGALGQGRSAHC 260
T+T+++S ACT +L GR+ H
Sbjct: 1615 LITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHG 1674
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
R F + VA SL+ MY KCG+++EA VF+ M K++ +N+MI+ YA HG AV
Sbjct: 1675 FITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVE 1734
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG-KVYFDSMAKHGLKPELDHYSCVV 379
A+ LF+ + K+ ++PD+ITF ++S+C H GLV EG ++ D ++KH + P ++HY CVV
Sbjct: 1735 ALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVV 1794
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPECAA 422
LL R G L+EA I MP P+A I + ++ LEP +
Sbjct: 1795 SLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSG 1854
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
+V L+N YA W + + +R LMK +GL+ NPGCSWI+ + F A D S+ + E
Sbjct: 1855 NYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEE 1914
Query: 483 ILPVLDFLVDQMKTLGYVPEVHEEK 507
I +L L+ +M+ +GYVP E+
Sbjct: 1915 IYAMLAMLLSEMRFMGYVPIASNEE 1939
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 150/282 (53%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ I + +D+ E ++ +++ +++ + + G +AI + +GSS+
Sbjct: 1360 QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSI 1419
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I YSK +I DA VF M ++VV+W +I+++ Q QV L + +MR+ L +
Sbjct: 1420 INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDS 1479
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T +SILSA + + G+ HC IR S + VANS+I MY KC +++A VF++
Sbjct: 1480 VTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDS 1539
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+D+V WN+++A YAQ GL+ A+ LF +M V P+ I++ VI G V E
Sbjct: 1540 TTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEA 1599
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
K F M G +P L ++ ++ L ++G EA F ++M
Sbjct: 1600 KDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKM 1641
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 149/299 (49%), Gaps = 13/299 (4%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG--FIANVYVG 173
+++ + + ++ E ++ + C R + G ++ G F N YV
Sbjct: 1155 LQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVE 1214
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA-----AFAQEWQVDMCLELYRMMR 228
+ L+ Y+KC A ++F + VRNV SW AI+ F++ D L M
Sbjct: 1215 TKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSE----DALLGFIEMQE 1270
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N + P++F ++L AC +G G+ H ++MGF + + V++SL+ MY KCG +E
Sbjct: 1271 NGVF-PDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLE 1329
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A VF++M K++V+WNSMI GY Q+GL AID+F +M + ++P +T +S+
Sbjct: 1330 DARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASA 1389
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ + EGK + L + S +++ + GL+E+A +M + + V W
Sbjct: 1390 NLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM-LEKDVVTW 1447
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 253/485 (52%), Gaps = 37/485 (7%)
Query: 65 TEVHLRLIQDFLQTDSKHLDSQKFNHDF-TGTNSTFGS-SNVFDQLLDTPVVDVEKLISM 122
++H LI+ + HL + H G + T + ++ L +P V + +++
Sbjct: 171 ADLHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLAL 230
Query: 123 HHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
H +L + A FL + I G + +RT + ++LIT Y++
Sbjct: 231 AVHAHAVKLGL-AGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYAR 289
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
+ DA +F+EMP RN VSW+A++ + Q L L+ M+ + P+D +
Sbjct: 290 AGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGV 349
Query: 243 LSACTGSGALGQGRSAH----CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
L+AC G L QG+ H IR+ F + +L+ MY KCG ++ A+ VF M
Sbjct: 350 LAACAQLGVLEQGKWVHGYLKANNIRITVF----LGTALVDMYAKCGEMQLAMEVFKVMK 405
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
K++++W +MI G A HG A++LF +M + VKPD I F+G + +C H GLV++G+
Sbjct: 406 EKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRE 465
Query: 359 YFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-------- 409
FDSM K+G+KP+++HY C+VDLL R GLL EAR+ +++MP+ P+A+IW A
Sbjct: 466 LFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFH 525
Query: 410 ---------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
+ + LEP+ + +V L N+YA A +R LM++KG+ PGCS
Sbjct: 526 KNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCST 585
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK-TLGYVP-------EVHEEKVDDAS 512
+EI V+++F D S+ + EIL D + +++ GYVP ++ EE+ ++A
Sbjct: 586 VEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKENAL 645
Query: 513 HKRTE 517
+ +E
Sbjct: 646 SRHSE 650
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 190/328 (57%), Gaps = 19/328 (5%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSG 250
+FEEMP RN+ SW A+I +A L + RM+ S + PND T ++LSAC G
Sbjct: 128 LFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLG 187
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL G+ H G + V N+L+ MY KCG +E A+ VF M KD++SWN++I
Sbjct: 188 ALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIG 247
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLK 369
G A H A++LF +M KPD ITF+G++ +C H GLVE+G YF SMA + +
Sbjct: 248 GLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIM 307
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESR 413
P+++HY C+VD+L RAG LE+A F+++MP+ + VIW E A R
Sbjct: 308 PQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQR 367
Query: 414 LL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
L+ LEP+ A +V L+N+Y W+ AR++ M+D G K PGCS IE+ + V F +
Sbjct: 368 LIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYS 427
Query: 473 EDKSNTRLSEILPVLDFLVDQMKTLGYV 500
D+ + ++ EI VL LV +++ GY+
Sbjct: 428 LDERHPQIEEIYGVLRGLVKVLRSFGYI 455
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN-DFTFTSIL-SACTG 248
++F EM RNVV+WT++I + + +L R L P D +I+ S
Sbjct: 34 EIFCEMFERNVVAWTSMINGYI------LSADLVSARRLFDLAPERDVVLWNIMVSGYIE 87
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
G + + R + + N+++ Y GNVE +F M ++I SWN++
Sbjct: 88 GGDMVEARKLFHEMPNRD----VMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNAL 143
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
I GYA +GL + F+ M+ + V P+ T + V+S+C G ++ GK G
Sbjct: 144 IGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSG 203
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
LK + + ++D+ + G++E A + M
Sbjct: 204 LKGNVYVGNALMDMYAKCGIIENAISVFRGM 234
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 216/360 (60%), Gaps = 21/360 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE-EMPVRNV--VSWTAIIAAFAQEWQVD 218
++ G ++ V +++IT YS+C I DA +VF+ + R++ VSW +I+ F+Q +
Sbjct: 228 VKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSE 287
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L+ + MR+ + + + F+++L +C+ L G+ H ++ GF VA+SLI
Sbjct: 288 DALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLI 347
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY KCG +E+A F+ ++WNS+I GYAQHG A+DLF M +RVK D I
Sbjct: 348 FMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHI 407
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
TF+ V+++C H GLVEEG + SM + +G+ P ++HY+C++DLLGRAG L+EA+ I+
Sbjct: 408 TFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEA 467
Query: 398 MPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQA 440
MP P+A++W + A L LEPE T+V L++++ +R W++
Sbjct: 468 MPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEK 527
Query: 441 ARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
A +++LMK++G+K PG SWIE+ N V F AED+S+ EI L L+++++ L YV
Sbjct: 528 ASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRRLDYV 587
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 3/288 (1%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ E + + R VD + + + G + ++ G+ NV+ GS
Sbjct: 80 NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGS 139
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC + DA++VF+ + +RN V+W A+I+ +AQ L M +E
Sbjct: 140 ALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEI 199
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+D TF +L+ H + ++ G S V N++I+ Y +CG++E+A VF
Sbjct: 200 DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF 259
Query: 295 NN-MHGKDI--VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+ + +D+ VSWNS++ G++Q GL+ A+ FE M Q V D F V+ SC
Sbjct: 260 DGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLA 319
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++ G+ + K G +P S ++ + + G++E+AR P
Sbjct: 320 TLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATP 367
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
CLAI++G A++Y +++I+ Y+KC I A K+F E R+ VSW +IA F
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+ LE + M+ + ++F SIL G + G+ H ++MG+ + ++L
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ MY KC VE+A VF +++ ++ V+WN++I+GYAQ G A L + M + V+ D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
TF +++ L + + KHGL + + ++ G +E+A
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDA 255
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 65 TEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQLLDTPVVD--------- 115
T+VH ++++ L +D+ ++ ++ S + VFD ++T +D
Sbjct: 221 TQVHAKIVKHGLASDTTVCNA--IITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILT 278
Query: 116 -------VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA 168
E + ++ + + +D S + SC ++ G L +++GF
Sbjct: 279 GFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEP 338
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N +V SSLI +YSKC VI DA K F+ P + ++W ++I +AQ + + L+L+ +M+
Sbjct: 339 NGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMK 398
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRS 257
+ ++ + TF ++L+AC+ G + +G S
Sbjct: 399 DRRVKLDHITFVAVLTACSHIGLVEEGWS 427
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL + HC I+ G + I AN++IS Y KCG + A +F +D VSWN+MIA
Sbjct: 14 ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIA 73
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G+ G A++ + M + D +F ++ G VE G+ M K G +
Sbjct: 74 GFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S ++D+ + +E+A + K + I N+V W A
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINI-RNSVTWNA 171
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 193/320 (60%), Gaps = 18/320 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV +++I+ +++ + +A K+F+ MP NVVSW A+IA ++Q Q + L+L+ M+
Sbjct: 321 NVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQ 380
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
++PN TF +L AC L QG AH IR GF S + V N+L+ MY KCG++E
Sbjct: 381 MVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIE 440
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A VF+ M +D S ++MI GYA +G + +++LFE+M +KPD +TF+GV+S+C
Sbjct: 441 DARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACC 500
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV+EG+ YFD M + + + P ++HY C++DLLGRAG +EA D I +MPI P+A +W
Sbjct: 501 HAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMW 560
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
+ A+ + L P+ A +V L+N+YA WD VR MKD+
Sbjct: 561 GSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDR 620
Query: 451 GLKTNPGCSWIEIMNVVYRF 470
+K GCSWI I V+ F
Sbjct: 621 KVKKKLGCSWIVIKKQVHAF 640
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 147/276 (53%), Gaps = 36/276 (13%)
Query: 162 IRTGF-IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
I+T F ++ +G+ L+++Y K +++A +VF+EMPV+NVVSWTA+IAA+A+
Sbjct: 91 IQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEA 150
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L + M++ ++PN FTF SIL ACT LG+ H + ++ GF S + V N L+ M
Sbjct: 151 LGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE---FHDEIVKGGFESNVFVGNGLVDM 207
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y K G +E A +F+ M +D+VSWN+MIAGY Q+GL A+ LF+E+ K+ D IT+
Sbjct: 208 YAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR----DVITW 263
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGL-------------------------KPELD-- 373
+++ G VE F+ M + L PE +
Sbjct: 264 NTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVI 323
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ V+ + G +EEA K MP N V W A
Sbjct: 324 SWNAVISGFAQNGQVEEALKLFKTMP-ECNVVSWNA 358
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 12/222 (5%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + + + +K + + + +C + + G + IR+GF ++V VG++L
Sbjct: 370 ENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTL 429
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC I DA KVF+ M ++ S +A+I +A LEL+ M+ + L+P+
Sbjct: 430 VGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDR 489
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA----NSLISMYCKCGNVEEAVY 292
TF +LSAC +G + +GR R F +I A +I + + G +EA
Sbjct: 490 VTFVGVLSACCHAGLVDEGRQYFDIMTR---FYHITPAMEHYGCMIDLLGRAGCFDEAND 546
Query: 293 VFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+ N M K D W S+++ H IDL E++ + +
Sbjct: 547 LINKMPIKPDADMWGSLLSACRTH----NNIDLGEKVAQHLI 584
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 218/426 (51%), Gaps = 49/426 (11%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCR 184
D+ +K D+ L T +++CG N+ G G+ + ++ ++LI +Y+ C
Sbjct: 212 DMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCG 271
Query: 185 -------------------------------VIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
++ DA +F++M R++V W+A+I+ +A+
Sbjct: 272 AMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAE 331
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
Q L+L+ M P+ T S++SAC+ GAL Q H R GF + V
Sbjct: 332 SDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSV 391
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
N+LI MY KCGN+ +A VF NM K+++SW+SMI +A HG A AI LF M + +
Sbjct: 392 NNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNI 451
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+P+ +TF+GV+ +C H GLVEEG+ F SM +HG+ P +HY C+VDL RA L +A
Sbjct: 452 EPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAI 511
Query: 393 DFIKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVR 435
+ I+ MP PN +IW E A RLL LEP+ V L+N+YA +
Sbjct: 512 ELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEK 571
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W+ +RK M KG+ S IEI N V+ F D+ + + EI LD +V ++K
Sbjct: 572 RWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLK 631
Query: 496 TLGYVP 501
+GY P
Sbjct: 632 LVGYKP 637
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 176/380 (46%), Gaps = 51/380 (13%)
Query: 117 EKLISMHHDLHR-ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
EK I ++H+L +D + + + G LA + GF+ + ++ +
Sbjct: 102 EKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTG 161
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y+ CR I+DA +F++M + V+W II + Q D L L+ MR+S ++P+
Sbjct: 162 LIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPD 221
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN--------- 286
++LSAC +G L GR+ H G+ + +LI+MY CG
Sbjct: 222 SVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYD 281
Query: 287 ----------------------VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
V++A ++F+ M +D+V W++MI+GYA+ A+ L
Sbjct: 282 GLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKL 341
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F+EM+++R PD IT L VIS+C H G + + + + G L + ++D+ +
Sbjct: 342 FDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAK 401
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVR 444
G L +AR+ + MP N + W + + N +A D A ++
Sbjct: 402 CGNLVKAREVFENMP-RKNVISWSS-----------------MINAFAMHGNADSAIKLF 443
Query: 445 KLMKDKGLKTNPGCSWIEIM 464
+ MK+ ++ N G ++I ++
Sbjct: 444 RRMKEVNIEPN-GVTFIGVL 462
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 15/230 (6%)
Query: 104 VFDQLLDTPVVDVEKLISMH--HDLHRERLKV-----------DASFLSTAVTSCGSTRN 150
+FDQ+++ +V +IS + D +E LK+ D + + +++C
Sbjct: 310 IFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGA 369
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ R+GF + V ++LI +Y+KC ++ A +VFE MP +NV+SW+++I A
Sbjct: 370 LAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 429
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI-RMGFFS 269
FA D ++L+R M+ +EPN TF +L AC +G + +G I G
Sbjct: 430 FAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISP 489
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLA 318
+ ++ +YC+ + +A+ + M +++ W S+++ HG A
Sbjct: 490 TREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEA 539
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 211/378 (55%), Gaps = 19/378 (5%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
Q L+++ G I V ++L T+Y + + A ++F+E P +++ SW A+I+ + Q
Sbjct: 338 QNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLT 397
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
D + L++ M L PN T TSILSAC GAL G+ H S + V+ +L
Sbjct: 398 DRAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTAL 456
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ MY KCG++ EA +F+ M K++V+WN+MI GY HG A+ LF EM++ + P
Sbjct: 457 VDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTG 516
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+TFL ++ +C H GLV EG F SMA +G +P +HY+C+VD+LGRAG L A +FI+
Sbjct: 517 VTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIE 576
Query: 397 QMPIYPNAVIWEA----------------AESRLL-LEPECAATHVQLANLYAGVRCWDQ 439
+MP+ P +W A A RL L+PE +V L+N+Y+ R + +
Sbjct: 577 RMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPK 636
Query: 440 AARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
AA VR+++K + L PGC+ IEI + Y F + D+S+ + + I +L+ L +M+ GY
Sbjct: 637 AASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGY 696
Query: 500 VPEVHEEKVDDASHKRTE 517
E + D + E
Sbjct: 697 QAETVTTALHDVEDEEKE 714
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 147/293 (50%), Gaps = 2/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E I + D+ L D++ L+T +T+ + R G QCLA + G ++VYV + L
Sbjct: 196 EDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGL 255
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I+LYSKC +F+++ +++S+ A+I+ + + + + L+R + S N
Sbjct: 256 ISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 315
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T ++ L R ++++G V+ +L ++YC+ V+ A +F+
Sbjct: 316 STLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE 375
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
K + SWN+MI+GY Q+GL RAI LF+EMM Q + P+ +T ++S+C G + G
Sbjct: 376 SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIG 434
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K + L+ + + +VD+ + G + EAR M + N V W A
Sbjct: 435 KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNA 486
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ D + A+++ + R G +I G +N++VGS+++ LY K A
Sbjct: 109 LRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAR 168
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
KVF+ MP R+ V W +I+ F++ + + ++ M + L + T ++L+A
Sbjct: 169 KVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQ 228
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
G C + G S + V LIS+Y KCG + +F+ + D++S+N+MI+
Sbjct: 229 EYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMIS 288
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
GY + A+ LF E++ + ++ T +G+I
Sbjct: 289 GYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACTGS 249
++F ++ ++ + +I F+ + LY +R + L P++FT+ +SA +
Sbjct: 67 QLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRL 126
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
G H +I G S + V ++++ +Y K E A VF+ M +D V WN+MI
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMI 186
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+G++++ +I +F +M+ + D+ T V+++
Sbjct: 187 SGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTA 223
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 2/166 (1%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
L+ + L Q Q I G + L + G V +FN + D+
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+N +I G++ +GL +I L+ + K ++PD T+ IS+ G +
Sbjct: 78 FLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHA 137
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G+ L S +VDL + E AR MP + V+W
Sbjct: 138 HSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLW 182
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 226/400 (56%), Gaps = 23/400 (5%)
Query: 128 RERLKV-DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGF--IANVYVGSSLITLYSKCR 184
RE+ +V D S+++ +C G IR GF +A V +L+ LY KCR
Sbjct: 97 REKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCR 156
Query: 185 VIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ +A KVF+ + ++V+SW+ +I +AQE + ++L+R +R S + F +SI+
Sbjct: 157 RMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIG 216
Query: 245 ACTGSGALGQGRSAHCQTIRMGF-FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
L QG+ H TI++ + + VANS++ MY KCG EA +F M +++V
Sbjct: 217 VFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVV 276
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SW MI GY +HG+ +A++LF EM + ++PD++T+L V+S+C H GL++EGK YF +
Sbjct: 277 SWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSIL 336
Query: 364 -AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA------------- 409
+ +KP+++HY+C+VDLLGR G L+EA++ I++MP+ PN IW+
Sbjct: 337 CSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEM 396
Query: 410 ----AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
E L E A +V ++N+YA W ++ ++R+ +K KGLK G SW+E+
Sbjct: 397 GKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDK 456
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMK-TLGYVPEVH 504
++ F D + + EI VL + ++K +GYV ++
Sbjct: 457 EIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSIN 496
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 146/278 (52%), Gaps = 6/278 (2%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
++ L+ + C R + G + + GF VG+S+I +YSKC ++ +A +VF
Sbjct: 3 ESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVF 62
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+PVRNV+SW A+IA + E + L L+R MR P+ +T++S L AC+ + A G
Sbjct: 63 NTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAG 122
Query: 254 QGRSAHCQTIRMGFFSYIQ--VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+G H IR GF Q VA +L+ +Y KC + EA VF+ + K ++SW+++I G
Sbjct: 123 EGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILG 182
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK--HGLK 369
YAQ A+DLF E+ + R + D +I L+E+GK K +GL
Sbjct: 183 YAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL- 241
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
E+ + V+D+ + GL EA ++M + N V W
Sbjct: 242 LEMSVANSVLDMYMKCGLTVEADALFREM-LERNVVSW 278
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 216/401 (53%), Gaps = 19/401 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I M+ + R+ L+ D + + +C +T + R GA +R +V + +SL+ +
Sbjct: 189 IEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDM 248
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K + A +VFE MP RN VSW+A+I+ AQ D L L+RMM+ S L PN
Sbjct: 249 YAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPV 308
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
L AC+ G L G+S H +R + V ++I MY KCG++ A +F+ +
Sbjct: 309 VGALLACSDLGLLKLGKSIHGFILRTLELDRM-VGTAVIDMYSKCGSLSSAQMLFDKVVS 367
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D++SWN MIA HG A+ LF+EM + V+PD TF ++S+ H GLVEEGK +
Sbjct: 368 RDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFW 427
Query: 360 FDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
F+ M ++G++P H C+VDLL R+GL+EEA + + P I A
Sbjct: 428 FNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNN 487
Query: 410 --------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AE L L+P ++NLYA + W + VRKLMKD G K PGCS I
Sbjct: 488 KLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSI 547
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
EI ++ F ED+S+ + +IL ++ L +M+ +GY+P+
Sbjct: 548 EIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPK 588
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 135/266 (50%), Gaps = 11/266 (4%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
+ D++ + A+++C ++ G A G+ +++V SS++ LY+KC + DA K
Sbjct: 100 RPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVK 159
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+ M R+ V+W+ ++ F Q +E+Y MR LE ++ ++ AC +G
Sbjct: 160 VFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGD 219
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
G S H +R + ++ SL+ MY K G ++A VF M ++ VSW+++I+
Sbjct: 220 ARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQ 279
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL--- 368
AQ+G A A+ LF M + P++ +G + +C GL++ GK + HG
Sbjct: 280 LAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGK------SIHGFILR 333
Query: 369 KPELDHY--SCVVDLLGRAGLLEEAR 392
ELD + V+D+ + G L A+
Sbjct: 334 TLELDRMVGTAVIDMYSKCGSLSSAQ 359
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 155/326 (47%), Gaps = 23/326 (7%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L ++SC + R + + L + + + + S L T Y++ + A
Sbjct: 2 DPRRLRRLLSSCAALRTLT--RLHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTL 59
Query: 194 EEMPVR--NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
P ++ +W A++AA ++ L ++R + + P+ TFT LSAC G
Sbjct: 60 ATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALPPAA-RPDSTTFTLALSACARLGD 118
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L G + G+ + I V +S++++Y KCG +++AV VF+ M +D V+W++M+ G
Sbjct: 119 LATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTG 178
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+ G V+AI+++ M + ++ D + +GV+ +C G G + +H ++ +
Sbjct: 179 FVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMD 238
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLY 431
+ + +VD+ + GL ++AR + MP + N V W A S+L Q N
Sbjct: 239 VVISTSLVDMYAKNGLFDQARRVFELMP-HRNDVSWSALISQL----------AQYGNA- 286
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPG 457
D+A + ++M+ GL N G
Sbjct: 287 ------DEALGLFRMMQVSGLHPNSG 306
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 213/389 (54%), Gaps = 22/389 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+A +T V +C ++R G G N+ V SSLI +Y KC + DA +VF
Sbjct: 127 NAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSSLIDMYGKCNNVDDARRVF 186
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-PNDFTFTSILSACTGSGAL 252
+ M RNVVSWT++I A+ Q + L+L+R L PN F S+++AC G L
Sbjct: 187 DGMDYRNVVSWTSMITAYGQNALGECALQLFREFNGLPLSSPNHFMLASVINACASLGRL 246
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
G+ AH IR G S VA++L+ MY KCG + + VF + ++ + SMI G
Sbjct: 247 VSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDKVFRRIPDPSVIPYTSMIVGA 306
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPE 371
A++GL ++D+F+EM+ +R+KP+ +TF+GV+ +C H GLV++G Y SM KHG+ P+
Sbjct: 307 AKYGLGKFSLDIFKEMLDRRIKPNDVTFVGVLHACSHSGLVDDGLEYLHSMHKKHGVVPD 366
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN--AVIW---------------EAAESRL 414
HY+CVVD+LGR G L+EA K + + P+ A++W S+
Sbjct: 367 TKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGTLLSASRLYGRVDIAVEASKW 426
Query: 415 LLEP--ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
L+E + AA +V ++N YA W+ +R MK G+ PGCSW+EI + Y F A
Sbjct: 427 LIESNQQVAAAYVTMSNTYAMAGKWENVHSIRYEMKHYGVYKEPGCSWVEIRDSAYVFYA 486
Query: 473 EDKS-NTRLSEILPVLDFLVDQMKTLGYV 500
D S R SE+ +L L +MK GYV
Sbjct: 487 GDVSLCARGSEVASLLRELERRMKERGYV 515
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 126/239 (52%), Gaps = 1/239 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+++GF+ + + + LI Y + R DA ++FEEM NV+S+T+++A F + + L
Sbjct: 54 LKSGFLNDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMAGFIKVGRPKSAL 113
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
++ M S + PN FTF ++++AC+ L G+ H G + V +SLI MY
Sbjct: 114 LIFCKMLESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSSLIDMY 173
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV-KPDAITF 340
KC NV++A VF+ M +++VSW SMI Y Q+ L A+ LF E + P+
Sbjct: 174 GKCNNVDDARRVFDGMDYRNVVSWTSMITAYGQNALGECALQLFREFNGLPLSSPNHFML 233
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
VI++C G + GKV ++ + G + S +VD+ + G + + +++P
Sbjct: 234 ASVINACASLGRLVSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDKVFRRIP 292
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
+H ++ GF + N LI+ Y + +A +F M +++S+ S++AG+ + G
Sbjct: 49 SHTNVLKSGFLNDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMAGFIKVGR 108
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A+ +F +M++ V P+A TF V+++C + G+ + G++ L S
Sbjct: 109 PKSALLIFCKMLESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSS 168
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++D+ G+ +++AR M Y N V W +
Sbjct: 169 LIDMYGKCNNVDDARRVFDGMD-YRNVVSWTS 199
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 196/344 (56%), Gaps = 18/344 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S++ Y+ ++ +A ++F MPV+NVVSW +II QE Q +EL+ M S +
Sbjct: 308 TSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVM 367
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+D T SILS C+ +G L G+ AHC + + NSLI MY KCG ++ A+ +
Sbjct: 368 PDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDI 427
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M K++VSWN +I A HG AI++F+ M + PD ITF G++S+C H GLV
Sbjct: 428 FFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLV 487
Query: 354 EEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--A 410
+ G+ YFD M + + P ++HY+C+VDLLGR G L EA I++MP+ P+ V+W A
Sbjct: 488 DMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLG 547
Query: 411 ESRLLLEPECA---------------ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
R+ E A +V L+N+Y+ + WD ++RK+M D G+K
Sbjct: 548 ACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKC 607
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
S+IEI Y+F +DK + + I +LD L+D +K++GY
Sbjct: 608 RAISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLMDHLKSVGY 651
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 32/288 (11%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
AI+ G + V ++++T Y CR+I+ A +VF+++ R +VSW ++IA +++ D
Sbjct: 163 AIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEA 222
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+ L++ M +E + FT S+LSA + L GR H + G V N+LI M
Sbjct: 223 ILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDM 282
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA---------------------- 318
Y KCG+++ A +VF+ M KD+VSW SM+ YA GL
Sbjct: 283 YAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSII 342
Query: 319 ---------VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
A++LF M V PD T + ++S C + G + GK + + +
Sbjct: 343 CCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIIT 402
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLE 417
+ + ++D+ + G L+ A D MP N V W L L
Sbjct: 403 VSVTLCNSLIDMYAKCGALQTAIDIFFGMP-EKNVVSWNVIIGALALH 449
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 118/237 (49%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I G A V L++L + + A+ +F+++P N + +I ++ L
Sbjct: 63 ILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSL 122
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
L+R M ++ PN FTF +L AC + H Q I++G + V N++++ Y
Sbjct: 123 LLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAY 182
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
C + A VF+++ + IVSWNSMIAGY++ G AI LF+EM++ V+ D T +
Sbjct: 183 VACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLV 242
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++S+ ++ G+ + G++ + + ++D+ + G L+ A+ QM
Sbjct: 243 SLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQM 299
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 64/150 (42%), Gaps = 3/150 (2%)
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
++ + + + + P T +L C+ L + H Q I G + + L+S+
Sbjct: 25 QINKTIWHQLKSPTHQTLHHLLDQCSSMKRL---KLVHAQIILHGLAAQVVTLGKLLSLC 81
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+ G++ A +F+ + + +N +I GY+ ++++ LF +M+ P+ TF
Sbjct: 82 VQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFP 141
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
V+ +C E + K G+ P
Sbjct: 142 FVLKACAAKPFYWEAVIVHAQAIKLGMGPH 171
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 218/385 (56%), Gaps = 19/385 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+T ++ +T + G I T + + VG+SL+ +Y+KC +A +F +
Sbjct: 314 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 373
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+ V WTA+I+A+ Q+ + L+L+ MR + + + TF S+L A +L G+
Sbjct: 374 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 433
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H I+ GF S + ++L+ +Y KCG++++AV F M ++IVSWN+MI+ YAQ+G
Sbjct: 434 LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGE 493
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A + F+EM+ ++PD+++FLGV+S+C H GLVEEG +F+SM + + L P +HY+
Sbjct: 494 AEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA 553
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEP- 418
VVD+L R+G EA + +MPI P+ ++W AA+ +E
Sbjct: 554 SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEEL 613
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
AA +V ++N+YA W+ ++V K M+D+G+K P SW+EI + + F A D+ +
Sbjct: 614 RDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHP 673
Query: 479 RLSEILPVLDFLVDQMKTLGYVPEV 503
++ EI +D L M+ LGY P+
Sbjct: 674 QIEEIRKKIDMLTKTMEELGYKPDT 698
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 146/298 (48%), Gaps = 1/298 (0%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L +E ++D+ + + + +I G I+T F+ NV+V ++L+ YSK
Sbjct: 201 LFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDS 260
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+IDA K+F+EMP ++ VS+ II+ +A + + +L+R ++ + + F F ++LS
Sbjct: 261 VIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSI 320
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
+ + GR H QTI S I V NSL+ MY KCG EEA +F N+ + V W
Sbjct: 321 ASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPW 380
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+MI+ Y Q G + LF +M + V D TF ++ + + GK + K
Sbjct: 381 TAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIK 440
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAAT 423
G + S ++D+ + G +++A ++MP N V W A S E AT
Sbjct: 441 SGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR-NIVSWNAMISAYAQNGEAEAT 497
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 25/275 (9%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + + + + + D + ++ + + S ++ G I++GF++NV+ GS+L
Sbjct: 394 EEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSAL 453
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC I DA + F+EMP RN+VSW A+I+A+AQ + + L+ ++ M S L+P+
Sbjct: 454 LDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDS 513
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN---------SLISMYCKCGNV 287
+F +LSAC+ SG + +G F S Q+ S++ M C+ G
Sbjct: 514 VSFLGVLSACSHSGLVEEG--------LWHFNSMTQIYKLDPRREHYASVVDMLCRSGRF 565
Query: 288 EEAVYVFNNMH-GKDIVSWNSMIAG---YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
EA + M D + W+S++ + LA RA D M + R DA ++ +
Sbjct: 566 NEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELR---DAAPYVNM 622
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+ G E +M G+K +L YS V
Sbjct: 623 SNIYAAAGQWENVSKVHKAMRDRGVK-KLPAYSWV 656
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 39/212 (18%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N + +I+ Y K + +A K+F+ M R V+WT +I ++Q Q EL+ M+
Sbjct: 77 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
EP+ TF ++LS C G Q Q I++G+ S + V N+L+ YCK ++
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 196
Query: 289 EAVYVFNNMH----------------------GKDIVS--------WNSMIAG-----YA 313
A +F M G+ I S WN ++ Y+
Sbjct: 197 LACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYS 256
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
+H + A LF+EM +Q D +++ +IS
Sbjct: 257 KHDSVIDARKLFDEMPEQ----DGVSYNVIIS 284
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 36/252 (14%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
Q I+ G+ + + VG++L+ Y K + A ++F+EMP
Sbjct: 167 QTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP-------------------- 206
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
E + FTF ++L A G + G+ H I+ F + V+N+L
Sbjct: 207 ---------------EIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNAL 251
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ Y K +V +A +F+ M +D VS+N +I+GYA G A DLF E+
Sbjct: 252 LDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQ 311
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
F ++S + E G+ E+ + +VD+ + G EEA
Sbjct: 312 FPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTN 371
Query: 398 MPIYPNAVIWEA 409
+ + +AV W A
Sbjct: 372 L-THRSAVPWTA 382
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N +IS Y K GN+ EA +F+ M + V+W +I GY+Q A +LF +M + +
Sbjct: 82 NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 141
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
PD +TF+ ++S C + + + K G L + +VD ++ L+ A
Sbjct: 142 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 201
Query: 395 IKQMP 399
K+MP
Sbjct: 202 FKEMP 206
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 231/407 (56%), Gaps = 19/407 (4%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
++VE L ++ L +E + + +++ + +C + +++ G C ++ G VG
Sbjct: 460 LNVEAL-NLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVG 518
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
SS+ +Y+K + AY+ F MPV++ V W +I +F+Q + ++ ++L+R M S +
Sbjct: 519 SSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTK 578
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ + ++ LSAC AL G+ HC +R F S VA++LI MY KCG + A V
Sbjct: 579 FDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSV 638
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M K+ VSWNS+IA Y HG +DLF EM++ ++PD +TFL ++S+C H GLV
Sbjct: 639 FDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLV 698
Query: 354 EEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---- 408
+EG YF M ++G+ ++H++C+VDL GRAG L EA D IK MP P+A W
Sbjct: 699 DEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLG 758
Query: 409 -------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A++ + L+P + +V L+N++AG W+ +VR LMK+KG++
Sbjct: 759 ACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKI 818
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PG SWI++ + F A D + + EI +L L+ +++ GYVP+
Sbjct: 819 PGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLELRKHGYVPQ 865
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 142/264 (53%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +CG N+ LA GF ++++GSSLI LY+ I DA +F+E+PVR+
Sbjct: 184 IKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDC 243
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
+ W ++ + + + L ++ MRNS ++PN +F +LS C G + G H
Sbjct: 244 ILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGL 303
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
IR GF S VAN++I+MY KCGN+ +A +F+ M D V+WN +IAGY Q+G A
Sbjct: 304 VIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEA 363
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ LF+ M+ VK D+ITF + S G ++ K + +HG+ ++ S +VD+
Sbjct: 364 VALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDI 423
Query: 382 LGRAGLLEEARDFIKQMPIYPNAV 405
+ G +E A +Q + AV
Sbjct: 424 YFKGGDVEMACKTFQQNTLVDVAV 447
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 149/294 (50%), Gaps = 1/294 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + ++ +K ++ ++ C + +R G L IR+GF ++ V +
Sbjct: 258 DFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN 317
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++IT+YSKC + DA K+F+ MP + V+W +IA + Q D + L++ M S ++
Sbjct: 318 TIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKL 377
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ TF S L + SG+L + H +R G + + ++L+ +Y K G+VE A F
Sbjct: 378 DSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTF 437
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
D+ +MI+GY +GL V A++LF ++++ + P+ +T V+ +C ++
Sbjct: 438 QQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLK 497
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
GK + K GL+ S + + ++G L+ A F ++MP+ ++V W
Sbjct: 498 LGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPV-KDSVCWN 550
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 5/275 (1%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
ASFL + + S GS + + Y +R G +VY+ S+L+ +Y K + A K F+
Sbjct: 383 ASFLPSVLKS-GSLKYCKEVHSY---IVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQ 438
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
+ + +V TA+I+ + L L+R + + PN T S+L AC +L
Sbjct: 439 QNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKL 498
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+ HC ++ G + QV +S+ MY K G ++ A F M KD V WN MI ++Q
Sbjct: 499 GKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQ 558
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+G AIDLF +M K D+++ +S+C + + GK + ++ +
Sbjct: 559 NGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFV 618
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S ++D+ + G L AR M + N V W +
Sbjct: 619 ASTLIDMYSKCGKLALARSVFDMMD-WKNEVSWNS 652
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 117/245 (47%), Gaps = 1/245 (0%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
G ++ +GS ++ +Y CR D +F + + + W +I F+ D L +
Sbjct: 106 GMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFF 165
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M S + P+ +TF ++ AC G + + H MGF + + +SLI +Y
Sbjct: 166 FRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDN 225
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G + +A Y+F+ + +D + WN M+ GY ++G A+ F+EM VKP++++F+ ++
Sbjct: 226 GYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLL 285
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
S C G+V G + + G + + + ++ + + G L +AR MP +
Sbjct: 286 SVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMP-QTDT 344
Query: 405 VIWEA 409
V W
Sbjct: 345 VTWNG 349
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
Q R H + + G + + + ++ MY C + ++ +F + + WN +I G++
Sbjct: 94 QVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFS 153
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL--VEEGKVYFDSMAKHGLKPE 371
G A+ F M+ V PD TF VI +C GGL V K+ + G +
Sbjct: 154 MLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKAC--GGLNNVPLCKMVHELARSMGFHMD 211
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE 408
L S ++ L G + +A+ ++P+ + ++W
Sbjct: 212 LFIGSSLIKLYTDNGYIHDAKYLFDELPV-RDCILWN 247
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/443 (31%), Positives = 236/443 (53%), Gaps = 32/443 (7%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMH---------HDLHRERLKVDASF----L 138
++ T ++ VFD + ++ +IS + + L R ++ + F L
Sbjct: 291 YSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTL 350
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
+ + C T ++ G IR +++ + ++++ +YSKC I A VF M
Sbjct: 351 VSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGK 410
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+NV++WTA++ +Q + L+L+ M+ + N T S++ C G+L +GR+
Sbjct: 411 KNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTV 470
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN-MHGKDIVSWNSMIAGYAQHGL 317
H IR G+ + ++LI MY KCG + A +FNN H KD++ NSMI GY HG
Sbjct: 471 HAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGH 530
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A+ ++ M+++R+KP+ TF+ ++++C H GLVEEGK F SM + H ++P+ HY+
Sbjct: 531 GRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYA 590
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRLLLEPE 419
C+VDL RAG LEEA + +KQMP P+ + EA A+ + L+
Sbjct: 591 CLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYL 650
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+ +V L+N+YA R W+ +R LM+ +G+K PG S IE+ N VY F A D S+
Sbjct: 651 NSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPS 710
Query: 480 LSEILPVLDFLVDQMKTLGYVPE 502
++I +L+ L +++ GY+P+
Sbjct: 711 WADIYQLLENLRLEVEAEGYIPD 733
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 171/356 (48%), Gaps = 16/356 (4%)
Query: 67 VHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQ--LLDTPVVDVEKLISMHH 124
+H ++I++++ T+S + K ++ + NVFDQ L +T V + + +
Sbjct: 66 IHAQIIKNWVSTES--FLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 125 DLHRE-----------RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
H E +++++ A+ +C + G A+R GF ++YVG
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
SS++ K + DA KVF+ MP ++VV W +II + Q+ ++++ M L
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+ T ++L AC SG G AH + +G + + V SL+ MY G+ A V
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALV 303
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F++M + ++SWN+MI+GY Q+G+ + LF +++ D+ T + +I C +
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDL 363
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
E G++ + + L+ L + +VD+ + G +++A +M N + W A
Sbjct: 364 ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMG-KKNVITWTA 418
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 131/260 (50%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
++ + +CG + + G + G +V+V +SL+ +YS A VF+ M
Sbjct: 249 MANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMC 308
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+++SW A+I+ + Q + L+R + S + T S++ C+ + L GR
Sbjct: 309 SRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRI 368
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H IR S++ ++ +++ MY KCG +++A VF M K++++W +M+ G +Q+G
Sbjct: 369 LHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGY 428
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
A A+ LF +M +++V +++T + ++ C H G + +G+ +HG + S
Sbjct: 429 AEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSA 488
Query: 378 VVDLLGRAGLLEEARDFIKQ 397
++D+ + G + A
Sbjct: 489 LIDMYAKCGKIHSAEKLFNN 508
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 211/378 (55%), Gaps = 19/378 (5%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
Q L+++ G I V ++L T+Y + + A ++F+E P +++ SW A+I+ + Q
Sbjct: 338 QNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLT 397
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
D + L++ M L PN T TSILSAC GAL G+ H S + V+ +L
Sbjct: 398 DRAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTAL 456
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ MY KCG++ EA +F+ M K++V+WN+MI GY HG A+ LF EM++ + P
Sbjct: 457 VDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTG 516
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+TFL ++ +C H GLV EG F SMA +G +P +HY+C+VD+LGRAG L A +FI+
Sbjct: 517 VTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIE 576
Query: 397 QMPIYPNAVIWEA----------------AESRLL-LEPECAATHVQLANLYAGVRCWDQ 439
+MP+ P +W A A RL L+PE +V L+N+Y+ R + +
Sbjct: 577 RMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPK 636
Query: 440 AARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
AA VR+++K + L PGC+ IEI + Y F + D+S+ + + I +L+ L +M+ GY
Sbjct: 637 AASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGY 696
Query: 500 VPEVHEEKVDDASHKRTE 517
E + D + E
Sbjct: 697 QAETVTTALHDVEDEEKE 714
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 147/293 (50%), Gaps = 2/293 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E I + D+ L D++ L+T +T+ + R G QCLA + G ++VYV + L
Sbjct: 196 EDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGL 255
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I+LYSKC +F+++ +++S+ A+I+ + + + + L+R + S N
Sbjct: 256 ISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 315
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
T ++ L R ++++G V+ +L ++YC+ V+ A +F+
Sbjct: 316 STLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE 375
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
K + SWN+MI+GY Q+GL RAI LF+EMM Q + P+ +T ++S+C G + G
Sbjct: 376 SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIG 434
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K + L+ + + +VD+ + G + EAR M + N V W A
Sbjct: 435 KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNA 486
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%)
Query: 124 HDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
H + L+ D + A+++ + R G +I G +N++VGS+++ LY K
Sbjct: 102 HLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKF 161
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
A KVF+ MP R+ V W +I+ F++ + + ++ M + L + T ++L
Sbjct: 162 TRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVL 221
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
+A G C + G S + V LIS+Y KCG + +F+ + D++
Sbjct: 222 TAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLI 281
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
S+N+MI+GY + A+ LF E++ + ++ T +G+I
Sbjct: 282 SYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACTGS 249
++F ++ ++ + +I F+ + LY +R + L P++FT+ +SA +
Sbjct: 67 QLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRL 126
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI 309
G H +I G S + V ++++ +Y K E A VF+ M +D V WN+MI
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMI 186
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+G++++ +I +F +M+ + D+ T V+++
Sbjct: 187 SGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTA 223
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 2/166 (1%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
L+ + L Q Q I G + L + G V +FN + D+
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+N +I G++ +GL +I L+ + K+ ++PD T+ IS+ G +
Sbjct: 78 FLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHA 137
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G+ L S +VDL + E AR MP + V+W
Sbjct: 138 HSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLW 182
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 208/367 (56%), Gaps = 18/367 (4%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
L I++G ++Y S+LI +YSKC ++ DA VF + +++V W ++I AQ Q +
Sbjct: 448 LIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEE 507
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
++L+ + S + PN+FTF ++++ + ++ G+ H I+ G + V+N+LI
Sbjct: 508 AIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALID 567
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
MY KCG ++E +F + G+D++ WNSMI YAQHG A A+ +F M + V+P+ +T
Sbjct: 568 MYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVT 627
Query: 340 FLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
F+GV+S+C H G V EG +F+SM + + ++P ++HY+ VV+L GR+G L A++FI++M
Sbjct: 628 FVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERM 687
Query: 399 PIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAA 441
PI P A +W AAE LL +P + +V L+N+YA W
Sbjct: 688 PIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVH 747
Query: 442 RVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
+R+ M G GCSWIE+ V+ F + + I VLD L +K LGYVP
Sbjct: 748 NLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNLGYVP 807
Query: 502 EVHEEKV 508
+ + +
Sbjct: 808 DTSDHTL 814
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 143/287 (49%), Gaps = 8/287 (2%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
L++ + +C ++ + G +A++ ANVYVG++LI LY+K + +A VF +
Sbjct: 122 LLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHAL 181
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
PVR V+W +I +AQ + LEL+ M + P+ F S +SAC+ G L GR
Sbjct: 182 PVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGR 241
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H R + V N LI +YCKC + A +F+ M +++VSW +MI+GY Q+
Sbjct: 242 QIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNS 301
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY- 375
AI +F M + +PD +++SC + +G+ + K L E D Y
Sbjct: 302 FNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADL--EADEYV 359
Query: 376 -SCVVDLLGRAGLLEEARDFIKQM----PIYPNAVIWEAAESRLLLE 417
+ ++D+ + L EAR + I NA+I +++R L E
Sbjct: 360 KNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAE 406
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 145/281 (51%), Gaps = 1/281 (0%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E ++ D L++AV++C + + GG A R+ + V + LI LY KC +
Sbjct: 215 EGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSA 274
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A K+F+ M RN+VSWT +I+ + Q + ++ M + +P+ F TSIL++C
Sbjct: 275 ARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGS 334
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A+ QGR H I+ + V N+LI MY KC ++ EA VF+ + D +S+N+M
Sbjct: 335 LAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAM 394
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I GY+++ A+++F+ M ++P +TF+ ++ +E K + K G
Sbjct: 395 IEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGT 454
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+L S ++D+ + L+ +A+ + M Y + VIW +
Sbjct: 455 SLDLYAASALIDVYSKCSLVNDAKT-VFNMLHYKDMVIWNS 494
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 137/274 (50%), Gaps = 5/274 (1%)
Query: 138 LSTAVTSC---GSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
L+ + SC G R R A G + ++++ + L+ YS + DA +F+
Sbjct: 18 LARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFD 77
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-PNDFTFTSILSACTGSGALG 253
MP RN+VSW ++I+ + Q + D + L+ + + E PN+F S+L ACT S A+
Sbjct: 78 RMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVS 137
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G H +++ + + V +LI++Y K G ++EA+ VF+ + + V+WN++I GYA
Sbjct: 138 LGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYA 197
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q G A++LF+ M + V+PD +S+C G +E G+ + + +
Sbjct: 198 QIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTS 257
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ ++DL + L AR M Y N V W
Sbjct: 258 VINVLIDLYCKCSRLSAARKLFDCME-YRNLVSW 290
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 140/273 (51%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I+M ++ + + D ++ + SCGS I G I+ A+ YV ++LI +
Sbjct: 307 ITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDM 366
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + +A VF+ + + +S+ A+I +++ + + +++ MR L P+ TF
Sbjct: 367 YAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTF 426
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S+L + A+ + H I+ G + A++LI +Y KC V +A VFN +H
Sbjct: 427 VSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHY 486
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
KD+V WNSMI G+AQ+ AI LF +++ + P+ TF+ +++ + G+ +
Sbjct: 487 KDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQF 546
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ K G+ + + ++D+ + G ++E R
Sbjct: 547 HAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGR 579
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 253/485 (52%), Gaps = 37/485 (7%)
Query: 65 TEVHLRLIQDFLQTDSKHLDSQKFNHDF-TGTNSTFGS-SNVFDQLLDTPVVDVEKLISM 122
++H LI+ + HL + H G + T + ++ L +P V + +++
Sbjct: 171 ADLHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLAL 230
Query: 123 HHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK 182
H +L + A FL + I G + +RT + ++LIT Y++
Sbjct: 231 AVHAHAVKLGL-AGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYAR 289
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
+ DA +F+EMP RN VSW+A++ + Q L L+ M+ + P+D +
Sbjct: 290 AGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGV 349
Query: 243 LSACTGSGALGQGRSAH----CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
L+AC G L QG+ H IR+ F + +L+ MY KCG ++ A+ VF M
Sbjct: 350 LAACAQLGVLEQGKWVHGYLKANNIRITVF----LGTALVDMYAKCGEMQLAMEVFKVMK 405
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
K++++W +MI G A HG A++LF +M + VKPD I F+G + +C H GLV++G+
Sbjct: 406 EKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRE 465
Query: 359 YFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-------- 409
FDSM K+G+KP+++HY C+VDLL R GLL EAR+ +++MP+ P+A+IW A
Sbjct: 466 LFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFH 525
Query: 410 ---------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
+ + LEP+ + +V L N+YA A +R LM++KG+ PGCS
Sbjct: 526 KNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCST 585
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK-TLGYVP-------EVHEEKVDDAS 512
+EI V+++F D S+ + EIL D + +++ GYVP ++ EE+ ++A
Sbjct: 586 VEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEEGYVPDKKEVLLDIEEEEKENAL 645
Query: 513 HKRTE 517
+ +E
Sbjct: 646 SRHSE 650
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
IR G+ A+V V ++L+ YS + A +VF++MP R++V+W A+I+ F+Q+ L
Sbjct: 132 IRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEAL 191
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+ Y MR+ ++ + FT ++S+C GAL G H G + V N+LI MY
Sbjct: 192 QTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMY 251
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG++++A+ +F+ M KDI +WNSMI GY HG AI F++M++ R++P+ +TFL
Sbjct: 252 AKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFL 311
Query: 342 GVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEA--------- 391
G++ C H GLV+EG YF+ M +K LKPE+ HY C+VDL GRAG L++A
Sbjct: 312 GLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSSH 371
Query: 392 ------RDFIKQMPIYPNAVIWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVR 444
R + I+ N I E A +RL L A + LA +YAG + AR+R
Sbjct: 372 NDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMR 431
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
K++K +G KT PG SWIEI V++F +DKS+ E+ L ++ Q GYV +
Sbjct: 432 KMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQASFFGYVGD 489
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 1/201 (0%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQ-VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F +M +W +II FAQ +D + +M+ +S P+ FTF+ +L AC
Sbjct: 60 LFHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIK 119
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
A + + H IR G+ + + V +L+ Y G+V A VF+ M +D+V+WN+MI+
Sbjct: 120 AERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMIS 179
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
++Q GL A+ + +M + V D T +G+ISSC H G + G ++GL
Sbjct: 180 CFSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQ 239
Query: 371 ELDHYSCVVDLLGRAGLLEEA 391
L + ++D+ + G L++A
Sbjct: 240 SLYVGNALIDMYAKCGSLDQA 260
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 106/238 (44%), Gaps = 14/238 (5%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLISM--HHDLHRERLK-----------VDASFL 138
++ S + VFD++ +V +IS LH+E L+ +D L
Sbjct: 150 YSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDIDGFTL 209
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
++SC + G A G ++YVG++LI +Y+KC + A +F+ M
Sbjct: 210 VGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRMQR 269
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG-RS 257
+++ +W ++I + + + ++ M + ++PN TF +L C+ G + +G +
Sbjct: 270 KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSHQGLVQEGVKY 329
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ + + ++ L+ +Y + G +++A+ + +N D V W ++ H
Sbjct: 330 FNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSSHNDSVLWRILLGSCKIH 387
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK---CGNVEEAVYVFNNM 297
+IL+ G +L + R H I G ++ +AN L++ +C G++ A +F+ M
Sbjct: 6 AILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLN-FCAISVSGSLAYAQLLFHQM 64
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK-PDAITFLGVISSCRHGGLVEEG 356
+WNS+I G+AQ + AI + +M+ PD TF V+ +C +
Sbjct: 65 ECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERKC 124
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K S+ + G ++ + +V G + AR +MP + V W A
Sbjct: 125 KEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPA-RDLVAWNA 176
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 206/396 (52%), Gaps = 53/396 (13%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF-------------------------- 193
L +R G ++YV +SLI LY KC I DA KVF
Sbjct: 159 LILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDA 218
Query: 194 -----EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSMLEPNDFTFTSILSAC 246
E MP RN+VSWT +I+ ++Q L L+ M +S + PN T S+L AC
Sbjct: 219 ALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPAC 278
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN--NMHGKDIVS 304
L +GR H RMG S V +L +MY KCG++ +A F+ N + K++++
Sbjct: 279 AQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIA 338
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN+MI YA +G ++A+ F EM++ ++PD ITF G++S C H GLV+ G YF+ M+
Sbjct: 339 WNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMS 398
Query: 365 K-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---------------- 407
+ + P ++HY+CV DLLGRAG L EA + +MP+ IW
Sbjct: 399 TTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMA 458
Query: 408 -EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNV 466
AA +LEPE +V L+N+YA W + ++R ++K +G K +PGCSWIEI
Sbjct: 459 ETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGK 518
Query: 467 VYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+ F D S+ + EI L+ L ++MK GY P+
Sbjct: 519 AHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPD 554
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+ ++A +A +D + ++ + + FTF +L + ++ G+ H +R
Sbjct: 109 SKMVAFYASSGDIDSSVSVFNGIGDY------FTFPFVLKSSVELLSVWMGKCVHGLILR 162
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS----------------- 307
+G + VA SLI +Y KCG + +A VF+NM +D+ SWN+
Sbjct: 163 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAI 222
Query: 308 --------------MIAGYAQHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGG 351
MI+GY+Q GLA +A+ LF+EM+K+ V+P+ +T + V+ +C
Sbjct: 223 FERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLS 282
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+E G+ + + GL + + + G L +AR+ ++
Sbjct: 283 TLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKL 329
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 117 EKLISMHHDLHRERLKVDASFLS--TAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
++ +S+ ++ +E V ++++ + + +C + G LA R G +N V
Sbjct: 248 QQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLI 307
Query: 175 SLITLYSKCRVIIDAYKVFEEM--PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
+L +Y+KC ++DA F+++ +N+++W +I A+A + +R M + +
Sbjct: 308 ALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGI 367
Query: 233 EPNDFTFTSILSACTGSGALGQG 255
+P+D TFT +LS C+ SG + G
Sbjct: 368 QPDDITFTGLLSGCSHSGLVDVG 390
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 219/439 (49%), Gaps = 53/439 (12%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++ + +H D + S ++ G L +R G ++YV +SL
Sbjct: 153 ERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSL 212
Query: 177 ITLYSKCRVIIDAYKVF-------------------------------EEMPVRNVVSWT 205
I LY KC I DA KVF E MP RN+VSWT
Sbjct: 213 IILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWT 272
Query: 206 AIIAAFAQEWQVDMCLELYRMM--RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
+I+ ++Q L L+ M +S + PN T S+L AC L +GR H
Sbjct: 273 TMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELAC 332
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFN--NMHGKDIVSWNSMIAGYAQHGLAVRA 321
RMG S V +L +MY KCG++ +A F+ N + K++++WN+MI YA +G ++A
Sbjct: 333 RMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQA 392
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVD 380
+ F EM++ ++PD ITF G++S C H GLV+ G YF+ M+ + + P ++HY+CV D
Sbjct: 393 VSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVAD 452
Query: 381 LLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAAT 423
LLGRAG L EA + +MP+ IW AA +LEPE
Sbjct: 453 LLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGN 512
Query: 424 HVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEI 483
+V L+N+YA W + ++R ++K +G K +PGCSWIEI + F D S+ + EI
Sbjct: 513 YVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEI 572
Query: 484 LPVLDFLVDQMKTLGYVPE 502
L+ L ++MK GY P+
Sbjct: 573 YMFLEALPEKMKAAGYFPD 591
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 33/262 (12%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
G VGS ++ Y+ I + VF + + + + ++I A+A+ + + Y
Sbjct: 100 GLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATY 159
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M + + FTF +L + ++ G+ H +R+G + VA SLI +Y KC
Sbjct: 160 FSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKC 219
Query: 285 GNVEEAVYVFNNMHGKDIVSWNS-------------------------------MIAGYA 313
G + +A VF+NM +D+ SWN+ MI+GY+
Sbjct: 220 GEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYS 279
Query: 314 QHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
Q GLA +A+ LF+EM+K+ V+P+ +T + V+ +C +E G+ + + GL
Sbjct: 280 QSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSN 339
Query: 372 LDHYSCVVDLLGRAGLLEEARD 393
+ + + G L +AR+
Sbjct: 340 ASVLIALTAMYAKCGSLVDARN 361
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P ++ + TG L G H + G V + +++ Y G+++ +V V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
FN + + +NSMI YA++G A R + + M D TF V+ S V
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
GK + + GL+ +L + ++ L G+ G + +A M I
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI 234
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 234/432 (54%), Gaps = 56/432 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYS-------------------- 181
V +C ++ G IR GF ++VYV +SL+T+YS
Sbjct: 120 VKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDV 179
Query: 182 -----------KCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
K + A K+F++MP +N+V+W+ +I+ +A+ D +ELY ++++
Sbjct: 180 VSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSE 239
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ N+ S++++C GAL G AH +R + + +L+ MY +CG++++A
Sbjct: 240 GVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKA 299
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
++VF+ + G+D +SW ++IAG+A HG A +A++ F M K + P ITF V+S+C HG
Sbjct: 300 IWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHG 359
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-- 407
GLVE G F+SM + + ++P L+HY C+VDLLGRAG L EA F+ +MP+ PNA IW
Sbjct: 360 GLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGA 419
Query: 408 ---------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
A ++ + L+PE + +V L+N+YA W+ +R++MK++G+
Sbjct: 420 LLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGV 479
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP-------EVHE 505
PG + E+ V++F DK++ + +I + + ++ +++ GY ++ E
Sbjct: 480 VKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDE 539
Query: 506 EKVDDASHKRTE 517
E+ + H+ +E
Sbjct: 540 EEKESNIHRHSE 551
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 31/269 (11%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
IR I +V+ S LI++ ++ A +VF ++ N+ + + I F+ D
Sbjct: 39 IRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSF 98
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
Y + + L P++ T+ ++ ACT G+L G AH Q IR GF S + V NSL++MY
Sbjct: 99 HFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMY 158
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR--------- 332
G+++ A YVF + D+VSW SM+AGY + G A LF++M ++
Sbjct: 159 STLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMIS 218
Query: 333 ----------------------VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
V + + VI+SC H G +E G+ D + ++ +
Sbjct: 219 GYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTV 278
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
L + +VD+ R G +++A Q+P
Sbjct: 279 NLILGTALVDMYARCGSIDKAIWVFDQLP 307
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 74/139 (53%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
+K I ++ L E + + + + + + SC + G +R N+ +G++L
Sbjct: 227 DKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTAL 286
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y++C I A VF+++P R+ +SWT +IA FA + LE + M + L P +
Sbjct: 287 VDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPRE 346
Query: 237 FTFTSILSACTGSGALGQG 255
TFT++LSAC+ G + +G
Sbjct: 347 ITFTAVLSACSHGGLVERG 365
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S L +CT L + H IR + A+ LIS+ ++ A VF +
Sbjct: 20 SFLESCT---TLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNP 76
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
++ +NS I G++ ++ + + + + PD +T+ ++ +C G ++ G
Sbjct: 77 NLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAH 136
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ +HG ++ + +V + G ++ A
Sbjct: 137 GQIIRHGFDSDVYVQNSLVTMYSTLGDIKSA 167
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 226/406 (55%), Gaps = 28/406 (6%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D ++ + +C ++ G + + GF +N++V +SLI +Y K ++ A +F
Sbjct: 91 DEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLF 150
Query: 194 EEMPVR--NVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACTGSG 250
+EM VR NVV W A+IA +AQ + +E++RMM+ + PND T S+L AC G
Sbjct: 151 DEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLG 210
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL G+ R + + N+L MY KCG + EA VFN M +D++SW+ +I
Sbjct: 211 ALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIIC 270
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLK 369
G A +G A A F EM+ KP+ + F+G++++C H GLV++G F++M K +G+
Sbjct: 271 GLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVS 330
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AES 412
P+++HY CVVDLL RAG L++A D I MP+ PN +IW A +
Sbjct: 331 PKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQH 390
Query: 413 RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
L L+ + + ++V LAN+Y+ + D AA+ R M++ G+ PGCSWIE+ N V+ F
Sbjct: 391 ILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFM 450
Query: 473 EDKSNTRLSEILPVLDFLVDQMKTLGYVPE-------VHEEKVDDA 511
D S+ ++I ++ L+ +MK GY P+ + EE+ +DA
Sbjct: 451 GDLSHPESNKIYSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDA 496
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN--DFTFTSILSACTGS 249
+F + N+ + A + A AQ ++ + +S PN +FTFTS+L AC G
Sbjct: 46 IFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGL 105
Query: 250 GALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD--IVSWNS 307
+ G+ H + GF S + V NSLI MY K G + A ++F+ M +D +V WN+
Sbjct: 106 AHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNA 165
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
MIAGYAQ+ AI++F MM+Q V P+ +T + V+ +C H G ++ GK +++
Sbjct: 166 MIAGYAQNEKYSDAIEVF-RMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISR 224
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ L + + D+ + G + EAR +M
Sbjct: 225 REMALGLFLGNALADMYAKCGCITEARRVFNKM 257
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-- 330
+A LI NV +A +F ++ +I + N+ + AQ+ AI F +
Sbjct: 26 IAVKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSP 85
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
PD TF V+ +C V G+ + K G + L + ++D+ +AG L
Sbjct: 86 NAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLL 145
Query: 391 ARDFIKQMPIYP-NAVIWEA 409
AR +M + N V W A
Sbjct: 146 ARHLFDEMFVRDRNVVCWNA 165
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 233/445 (52%), Gaps = 64/445 (14%)
Query: 124 HDLHRERLKVDASFLSTAV-TSCGSTRNIRGGAPYQCLAIRTG-FIANVYVGSSLITLYS 181
+ L R+ V SF TA+ +CG+ ++ G I G F +++VG+S+I +Y
Sbjct: 134 YSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYI 193
Query: 182 KCRVIIDAYKVFEEMPVRNVVSWTAIIAA------------------------------- 210
KC + KVF+EMP R+V+SWT +I+A
Sbjct: 194 KCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSG 253
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR------ 264
FAQ + + + M+ +E ++ T ++SAC GA + + IR
Sbjct: 254 FAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGA-----AKYADWIRDVAEKS 308
Query: 265 -MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G + V ++LI MY KCG+V +A VF M +++ S++SMI G+A HG A+
Sbjct: 309 EFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMK 368
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLL 382
LF+EM+K +KP+ +TF+GV+++C H G+VE+G F+ M K +G+KP DHY+C+VDLL
Sbjct: 369 LFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLL 428
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHV 425
GRAG L+EA + +K MPI P+ +W AA LEP C ++
Sbjct: 429 GRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYI 488
Query: 426 QLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI-MNVVYRFRAEDKSNTRLSEIL 484
LAN+YA W+ + VRKLM+ +GL+ NP SWIE +V+ F + D ++ R EI
Sbjct: 489 LLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIK 548
Query: 485 PVLDFLVDQMKTLGYVPEVHEEKVD 509
L+ L+D+++ GY P + D
Sbjct: 549 QALEDLLDRLEAKGYQPHLSSVSYD 573
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 36/296 (12%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY--KVFEEM 196
S VT+ +N+ + G + YV + LI +K + +D Y +F ++
Sbjct: 47 SQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQV 106
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
N + A+I + E ++ E Y +MR + P FTFT++ AC +G GR
Sbjct: 107 NYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGR 166
Query: 257 SAHCQTIRMGFFSY-IQVANSLISMYCKC------------------------------- 284
H QTI +G F + V NS+I MY KC
Sbjct: 167 QIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKS 226
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
GN+E A +F+ + KD+V+W M++G+AQ+ AI FE+M + V+ D IT +GVI
Sbjct: 227 GNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVI 286
Query: 345 SSCRHGGLVEEGKVYFDSMAKH--GLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
S+C G + D K G K + S ++D+ + G + +A + M
Sbjct: 287 SACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGM 342
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 219/397 (55%), Gaps = 34/397 (8%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV---------YVGSSLITLYSKCRVIID 188
L + ++ C + G C AI+ +I N+ V ++LI +YSKC+
Sbjct: 370 LVSLLSGCALAGTLLHGKETHCHAIK--WILNLDENDPGDDLMVINALIDMYSKCKSPKA 427
Query: 189 AYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSMLEPNDFTFTSILS 244
A +F+ +P R+VV+WT +I AQ + + LEL+ M ++ + PN FT + L
Sbjct: 428 ARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALM 487
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
AC GAL GR H +R F S + VAN LI MY K G+V+ A VF+NMH ++ V
Sbjct: 488 ACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGV 547
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
SW S++ GY HG A+ +F EM K + PD +TF+ V+ +C H G+V++G YF+ M
Sbjct: 548 SWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGM 607
Query: 364 AK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------------- 407
K G+ P +HY+C+VDLL RAG L+EA + I+ MP+ P +W
Sbjct: 608 NKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVEL 667
Query: 408 -EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
E A ++LL LE ++ L+N+YA RCW AR+R LMK+ G+K PGCSW++
Sbjct: 668 GEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRK 727
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
F A D S+ +I +L L+ ++K LGYVP+
Sbjct: 728 GTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPD 764
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 142/261 (54%), Gaps = 4/261 (1%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E ++ ++ + R + D + +CG + R GA + +GF NV+VG+
Sbjct: 107 LEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNG 166
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNV---VSWTAIIAAFAQEWQVDMCLELY-RMMRNSM 231
L+++Y +C +A +VF+EM R V VSW +I+AA+ Q ++++ RM +
Sbjct: 167 LVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLG 226
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+ + ++L AC GA +G+ H +R G F + V N+++ MY KCG +EEA
Sbjct: 227 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 286
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF M KD+VSWN+M+ GY+Q G A+ LFE++ +++++ + +T+ VI+ G
Sbjct: 287 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 346
Query: 352 LVEEGKVYFDSMAKHGLKPEL 372
L E F M G +P +
Sbjct: 347 LGFEALDVFRQMRLCGSEPNV 367
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 48/324 (14%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ DA L + +C S G A+R+G +V+VG++++ +Y+KC ++ +A
Sbjct: 227 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 286
Query: 191 KVFEEMPVR-----------------------------------NVVSWTAIIAAFAQEW 215
KVFE M V+ NVV+W+A+IA +AQ
Sbjct: 287 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 346
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF-------F 268
L+++R MR EPN T S+LS C +G L G+ HC I+
Sbjct: 347 LGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPG 406
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD--IVSWNSMIAGYAQHGLAVRAIDLFE 326
+ V N+LI MY KC + + A +F+ + KD +V+W +I G AQHG A A++LF
Sbjct: 407 DDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFS 466
Query: 327 EMMK--QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS-CVVDLLG 383
+M++ V P+A T + +C G + G+ + ++ + + + C++D+
Sbjct: 467 QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYS 526
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW 407
++G ++ AR M N V W
Sbjct: 527 KSGDVDAARVVFDNMH-QRNGVSW 549
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V W +I ++ L+LYR M+ P+ +TF +L AC + G S H
Sbjct: 91 VFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHA 150
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK---DIVSWNSMIAGYAQHGL 317
GF + V N L+SMY +CG E A VF+ M + D+VSWNS++A Y Q G
Sbjct: 151 VVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGD 210
Query: 318 AVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
++RA+ +FE M + ++PDA++ + V+ +C G GK + GL ++ +
Sbjct: 211 SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGN 270
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
VVD+ + G++EEA ++M + + V W A
Sbjct: 271 AVVDMYAKCGMMEEANKVFERMKV-KDVVSWNA 302
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 227/411 (55%), Gaps = 20/411 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ ++ + + ++ + ++ D S + T V++C + +I G GF +N+ + +
Sbjct: 246 NYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVN 305
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL+ LYSKC + A +FE + ++V+SW +I + L L++ M S P
Sbjct: 306 SLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERP 365
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVY 292
ND T SIL AC GA+ GR H + + + SLI MY KCG++E A
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQ 425
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VFN++ K + SWN+MI G+A HG A A D+F M K ++PD ITF+G++S+C G+
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGM 485
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---- 407
++ G+ F +M + + + P+L+HY C++DLLG +GL +EA + I M + P+ VIW
Sbjct: 486 LDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLL 545
Query: 408 -------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
A++ + +EPE +V L+N+YA W++ A++R L+ DKG+K
Sbjct: 546 KACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKK 605
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
PGCS IEI +VV+ F DK + R EI +L+ + ++ G+VP+ E
Sbjct: 606 VPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 146/284 (51%), Gaps = 35/284 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSK------CRVIID------- 188
+ SC ++ + G ++ G+ +++V +SLI++Y + R + D
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDV 200
Query: 189 ------------------AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
A K+F+E+PV++VVSW A+I+ +A+ LEL++ M +
Sbjct: 201 VSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKT 260
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ P++ T +++SAC SG++ GR H GF S +++ NSL+ +Y KCG +E A
Sbjct: 261 NIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETA 320
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F + KD++SWN++I GY L A+ LF+EM++ +P+ +T L ++ +C H
Sbjct: 321 CGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHL 380
Query: 351 GLVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
G ++ G+ VY D K S ++D+ + G +E A
Sbjct: 381 GAIDIGRWIHVYIDKRLKSATNASSLRTS-LIDMYAKCGDIEAA 423
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRV------IIDAYKVFEEMPVRNVVSWTAIIAAFAQEW 215
I+TG Y S L+ L C + + A VFE + N++ W + A
Sbjct: 57 IKTGLHNTNYALSKLLEL---CVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSS 113
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
L+LY M + L PN +TF +L +C S A +G+ H +++G+ + V
Sbjct: 114 DPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHT 173
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG-----------LAVR---- 320
SLIS+Y + G +E+A VF+ +D+VS+ ++I GYA G + V+
Sbjct: 174 SLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVS 233
Query: 321 ----------------AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
A++LF+EMMK ++PD T + V+S+C G +E G+ +
Sbjct: 234 WNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWID 293
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
HG L + ++DL + G LE A + + +Y + + W
Sbjct: 294 DHGFGSNLKIVNSLMDLYSKCGELETACGLFEGL-LYKDVISW 335
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE---AVYVFNNMHGKDIVSWNSMIAGY 312
R H Q I+ G + + L+ + + + A+ VF + +++ WN+M G+
Sbjct: 50 RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 109
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
A V A+ L+ M+ + P++ TF ++ SC +EG+ + K G +L
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDL 169
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMP 399
++ ++ + + G LE+AR + P
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSP 196
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 220/419 (52%), Gaps = 52/419 (12%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC---- 183
+E K + S S+ +++ S ++ G + GF +V+V SSLI +Y KC
Sbjct: 309 QEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETK 368
Query: 184 --RVIID-------------------------AYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
R + D A +F MPVRN VSW+AIIA Q
Sbjct: 369 DGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQ 428
Query: 217 VDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
D E++ M PN TF+S+L AC + +L +G++ H + +++G V +
Sbjct: 429 FDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTA 488
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK-QRVKP 335
L MY K G++E + VFN M K+ VSW +MI G A+ GLA ++ LFEEM K + P
Sbjct: 489 LTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAP 548
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
+ + FL V+ +C H GLV++G YF+SM A +GLKP+ H++CVVD+L RAG L EA +F
Sbjct: 549 NEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEF 608
Query: 395 IKQMPIYPNAVIWEAAESRL------------------LLEPECAATHVQLANLYAGVRC 436
I MP P W A S + E CA +V L+N+YA
Sbjct: 609 IYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAG-YVLLSNIYASAGR 667
Query: 437 WDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
W +VRKLMK KGLK + GCSW+EI + V+ F +ED ++++ +EI +L+ L +MK
Sbjct: 668 WRDVLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMK 726
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 156/346 (45%), Gaps = 63/346 (18%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL------ 179
L +K + ++ V +C + + G L ++TG+ ++ V +SLITL
Sbjct: 175 LLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGE 234
Query: 180 -------------------------YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE 214
Y + + +A ++F+EMP RN VSW+A+IA + Q
Sbjct: 235 IHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQS 294
Query: 215 WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
+ L L+ M +PN F+SILSA AL G + H ++GF + V+
Sbjct: 295 GYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVS 354
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG-----------LAVR--- 320
+SLI MYCKCG ++ ++F+ + K++VSWN+M+ GY+ +G + VR
Sbjct: 355 SSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNV 414
Query: 321 -----------------AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
++F EM+ P+ TF ++ +C +++GK +
Sbjct: 415 SWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKI 474
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K G++ + + + D+ ++G +E ++ +MP N V W A
Sbjct: 475 VKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMP-KKNEVSWTA 519
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 4/216 (1%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LI+ + K + ++ FE P +NVVSWTA I+ + Q ++L+ + S ++
Sbjct: 122 TALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVK 181
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN TFTS++ AC G G G S ++ G+ + V+NSLI++ + G + A V
Sbjct: 182 PNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREV 241
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M KD+VSW +++ Y + A +F+EM ++ + +++ +I+ G
Sbjct: 242 FDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQR----NEVSWSAMIARYCQSGYP 297
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
EE F M + G KP + +S ++ L L+
Sbjct: 298 EESLRLFCRMIQEGFKPNISCFSSILSALASVEALQ 333
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 40/259 (15%)
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
IR G+ +TG + Y+ L+ +Y R +A ++ ++ ++V +I+A
Sbjct: 37 IRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISA 96
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
Q +D +L+ + M + N+ ++T+++S GF Y
Sbjct: 97 NVQRGNLDEARKLF----DEMPQTNEISWTALIS---------------------GFMKY 131
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
G V E+++ F +++VSW + I+GY Q+G +V A+ LF ++++
Sbjct: 132 --------------GRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLE 177
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
VKP+ +TF V+ +C + G G + K G + +L + ++ L R G +
Sbjct: 178 SEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHL 237
Query: 391 ARDFIKQMPIYPNAVIWEA 409
AR+ +M + V W A
Sbjct: 238 AREVFDRME-EKDVVSWTA 255
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T S+L T G + G + H + G S ++ L+ MY EA + +
Sbjct: 23 TCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDF 82
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
G D+V N MI+ Q G A LF+EM + + I++ +IS G V E
Sbjct: 83 DGFDLVVHNCMISANVQRGNLDEARKLFDEM----PQTNEISWTALISGFMKYGRVRESM 138
Query: 358 VYFD 361
YF+
Sbjct: 139 WYFE 142
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 208/360 (57%), Gaps = 24/360 (6%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRM 226
++ V ++LI +YSKCR A +F+++P+ RNVV+WT +I AQ + L+L+
Sbjct: 445 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 504
Query: 227 MRNSM--LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF--SYIQVANSLISMYC 282
M + + PN +T + IL AC A+ G+ H +R + S VAN LI MY
Sbjct: 505 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 564
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG+V+ A +VF++M K +SW SM+ GY HG A+D+F++M K PD ITFL
Sbjct: 565 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 624
Query: 343 VISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V+ +C H G+V++G YFDSM A +GL P +HY+C +DLL R+G L++A +K MP+
Sbjct: 625 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPME 684
Query: 402 PNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVR 444
P AV+W E A ++L+ + E ++ ++N+YA W AR+R
Sbjct: 685 PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIR 744
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
LMK G+K PGCSW++ F D+S+ +I +L+ L+D++K +GYVPE +
Sbjct: 745 HLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETN 804
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 130/253 (51%), Gaps = 9/253 (3%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R + D L + +CG + R G+ + L GF +NV++ ++L+ +YS+C +
Sbjct: 148 RAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 207
Query: 188 DAYKVFEEMPVR---NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-PND-----FT 238
+A +F+E+ R +V+SW +I++A + L+L+ M + E P + +
Sbjct: 208 EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 267
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+IL AC A+ Q + H IR G F + V N+LI Y KCG +E AV VFN M
Sbjct: 268 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 327
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
KD+VSWN+M+AGY+Q G A +LF+ M K+ + D +T+ VI+ G E
Sbjct: 328 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 387
Query: 359 YFDSMAKHGLKPE 371
F M G P
Sbjct: 388 LFRQMIFSGSLPN 400
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 143/308 (46%), Gaps = 51/308 (16%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +CGS + + AIR G +V+VG++LI Y+KC ++ +A KVF M ++V
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 331
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE---------------------------- 233
VSW A++A ++Q + EL++ MR +
Sbjct: 332 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQ 391
Query: 234 -------PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY----------IQVANS 276
PN T S+LSAC GA QG H +++ + + V N+
Sbjct: 392 MIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 451
Query: 277 LISMYCKCGNVEEAVYVFNN--MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-- 332
LI MY KC + + A +F++ + +++V+W MI G+AQ+G + A+ LF EM+ +
Sbjct: 452 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 511
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY--SCVVDLLGRAGLLEE 390
V P+A T ++ +C H + GK + +H ++ +C++D+ + G ++
Sbjct: 512 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDT 571
Query: 391 ARDFIKQM 398
AR M
Sbjct: 572 ARHVFDSM 579
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 121/253 (47%), Gaps = 10/253 (3%)
Query: 166 FIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
FI+ +G+ ++ Y C A V E + V W +I ++ ++D + +
Sbjct: 85 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M + P+ FT +L AC + G + H GF S + + N+L++MY +CG
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 204
Query: 286 NVEEAVYVFNNMHGK---DIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQRVKP-----D 336
++EEA +F+ + + D++SWNS+++ + + A A+DLF +M + KP D
Sbjct: 205 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 264
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
I+ + ++ +C V + K + ++G P++ + ++D + GL+E A
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324
Query: 397 QMPIYPNAVIWEA 409
M + + V W A
Sbjct: 325 MME-FKDVVSWNA 336
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 207/354 (58%), Gaps = 20/354 (5%)
Query: 169 NVYVGSSLITLYSKC--RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+++V ++L+ Y++ A VF+EMP R+VV+WT+++ A+ + Y
Sbjct: 79 HLHVANALVDAYARLPHAGAAAARAVFDEMPRRDVVTWTSLLTGLARAGAHGAAVRAYHG 138
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M S ++P++F + LS+C S AL GRS H +R+G + V NSL+SMY K G
Sbjct: 139 MVASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPFRSVENSLVSMYAKTGA 198
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+ +A VF+ M + ++W ++I GYAQ+G ++++++ +M++ +PD +TF+G++ +
Sbjct: 199 LRDARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYADMVRSGCRPDYVTFIGLLFA 258
Query: 347 CRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
C H GLV+ G+ +F SM +G+ P DHY+C+VDLLGRAG L+EA D + + +A
Sbjct: 259 CSHAGLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDAT 318
Query: 406 IWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMK 448
+W+ AAE L+P A +V L+NLY+ R W AR+R LMK
Sbjct: 319 VWKSLLGACRVHQNAELAERAAEMVWRLDPADAVPYVMLSNLYSRARRWGDVARIRALMK 378
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
+G+ PGCSW+ + + + F ED+ + R +EI ++ + ++++ GYVP+
Sbjct: 379 ARGVTKEPGCSWVGVNGITHLFHVEDRDHPRAAEIYRKVEEMTERIRVEGYVPD 432
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 205/355 (57%), Gaps = 19/355 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRN-VVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
+S+I Y K + A +F +MP +N +SWT +I+ + Q L+L+ M+NS +
Sbjct: 180 NSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNV 239
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
P++ + S LSAC+ GAL QG+ H + + LI MY KCG +EEA+
Sbjct: 240 PPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALG 299
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF NM K + W ++I+GYA HGL AI F EM VKP+AITF V+++C + GL
Sbjct: 300 VFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGL 359
Query: 353 VEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW---- 407
VEEGK F+++ + + LKP ++HY C+VDLLGRAGLL EA FI++MP+ PNAVIW
Sbjct: 360 VEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLL 419
Query: 408 -------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
+ E + ++ +V +AN++A + WD+AA R+LM+++G+
Sbjct: 420 KACQIHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVK 479
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
PGCS I + + F A D+S+ + EI F+ +++ GYVPE+ + +D
Sbjct: 480 VPGCSAISLEGTTHEFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLD 534
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 99/240 (41%), Gaps = 37/240 (15%)
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W +I + Q D L LY M N +TF +L AC+ A + H
Sbjct: 78 WNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHIT 137
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM--------------- 308
+ G+ I NSLI+ Y GN + A +F+ + D VSWNS+
Sbjct: 138 KFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALT 197
Query: 309 -----------------IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
I+GY Q G+ A+ LF EM V PD ++ +S+C G
Sbjct: 198 LFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLG 257
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSC--VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+E+GK + S A + + +D C ++D+ + G +EEA K M + +W A
Sbjct: 258 ALEQGK-WIHSYA-NKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKT-KSVQVWTA 314
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 105/220 (47%), Gaps = 6/220 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + H++ + D L++A+++C + G A +T + + LI +
Sbjct: 228 LQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDM 287
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + +A VF+ M ++V WTA+I+ +A + + M+N ++PN TF
Sbjct: 288 YAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITF 347
Query: 240 TSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
T++L+AC+ +G + +G+S R I+ ++ + + G + EA M
Sbjct: 348 TAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMP 407
Query: 299 GK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
K + V W S++ H + I+L E++ + ++ D+
Sbjct: 408 LKPNAVIWGSLLKACQIH----KNIELGEKIGEILIEMDS 443
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 211/377 (55%), Gaps = 18/377 (4%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E +++D S + +C + ++ G I+ G + V VG+ L+ Y KC
Sbjct: 287 EGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEA 346
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A + FE + N SW+A+IA + Q Q D LE+++ +R+ + N F +T+I AC+
Sbjct: 347 ARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSA 406
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
L G H I+ G +Y+ +++ISMY KCG V+ A F + D V+W ++
Sbjct: 407 VSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAI 466
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHG 367
I +A HG A A+ LF+EM V+P+A+TF+G++++C H GLV+EGK DSM+ ++G
Sbjct: 467 ICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYG 526
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AA 410
+ P +DHY+C++D+ RAGLL+EA + I+ +P P+ + W+ AA
Sbjct: 527 VNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAA 586
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRF 470
++ L+P +AT+V + NLYA WD+AA+ RK+M ++ L+ CSWI + V+RF
Sbjct: 587 DNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRF 646
Query: 471 RAEDKSNTRLSEILPVL 487
D+ + + +I L
Sbjct: 647 VVGDRHHPQTEQIYSKL 663
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 138/288 (47%), Gaps = 18/288 (6%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
+N ++ + ++ +Y C+ A + F+++ +++ SW+ II+A+ +E ++D + L+ M
Sbjct: 124 SNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRM 183
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ + PN F++++ + T L G+ H Q IR+GF + I + + +MY KCG +
Sbjct: 184 LDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWL 243
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ A N M K+ V+ ++ GY + A+ LF +M+ + V+ D F ++ +C
Sbjct: 244 DGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKAC 303
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G + GK K GL+ E+ + +VD + E AR + + PN W
Sbjct: 304 AALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIH-EPNDFSW 362
Query: 408 EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
A L+ C + +D+A V K ++ KG+ N
Sbjct: 363 SA-----LIAGYCQSGQ------------FDRALEVFKAIRSKGVLLN 393
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 147/319 (46%), Gaps = 16/319 (5%)
Query: 105 FDQLLDTPVVDVEKLISMHHDLHR--ERLKV-----------DASFLSTAVTSCGSTRNI 151
FD+++D + +IS + + R E +++ ++S ST + S +
Sbjct: 149 FDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSML 208
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
G IR GF AN+ + + + +Y KC + A +M +N V+ T ++ +
Sbjct: 209 DLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGY 268
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
+ + L L+ M + +E + F F+ IL AC G L G+ H I++G S +
Sbjct: 269 TKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEV 328
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
V L+ Y KC E A F ++H + SW+++IAGY Q G RA+++F+ + +
Sbjct: 329 SVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSK 388
Query: 332 RVKPDAITFLGVISSCRH-GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
V ++ + + +C L+ +++ D++ K GL L S ++ + + G ++
Sbjct: 389 GVLLNSFIYTNIFQACSAVSDLICGAQIHADAI-KKGLVAYLSGESAMISMYSKCGQVDY 447
Query: 391 ARDFIKQMPIYPNAVIWEA 409
A + P+ V W A
Sbjct: 448 AHQAFLTID-KPDTVAWTA 465
>gi|326515584|dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 594
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 225/393 (57%), Gaps = 29/393 (7%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++ ++ CG+ ++ G Q + G AN+ V +S + LY + +A ++FEEM
Sbjct: 100 LTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMD 159
Query: 198 VRNVVSWTAIIAAFAQ---EWQVDM--------CLELYRMMRNSMLEPNDFTFTSILSAC 246
++++W A+I+ +AQ + D+ L+L+R + S L+P+ FTF+SILS C
Sbjct: 160 SSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVC 219
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ AL QG H TI+ G S + V ++L++MY KCG++E A F M + V+W
Sbjct: 220 SAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWT 279
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AK 365
SMI+GY+QHG + AI LFE+M+ +P+ ITF+ ++S+C + GLVEE + YFD M +
Sbjct: 280 SMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNE 339
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----------------- 408
+ ++P +DHY C+VD+ R G L++A FIK+ PN IW
Sbjct: 340 YHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFY 399
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AA+ L L+P+ T+V L N+Y W ARVRKL K + + SWI I + VY
Sbjct: 400 AADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVY 459
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
FRA+D ++ + +E+ +L+ L+++ K +GY P
Sbjct: 460 FFRADDMTHPQATELYQLLENLLEKAKAVGYEP 492
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 138/278 (49%), Gaps = 13/278 (4%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+++C + R I G +I+ G +G+SL LY K + + F+ P +NV
Sbjct: 2 LSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNV 61
Query: 202 VSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
++WT +I++ A+ E +D+ L L+ M + PN+FT TS++S C + G+
Sbjct: 62 ITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQA 121
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ------ 314
++G + + V NS + +Y + G +EA+ +F M I++WN+MI+GYAQ
Sbjct: 122 FCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAK 181
Query: 315 -----HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+A+ LF ++++ +KPD TF ++S C +E+G+ + K G
Sbjct: 182 DDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCL 241
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ S +V++ + G +E A +MP V W
Sbjct: 242 SDVVVNSALVNMYNKCGSIECATKAFVEMPTR-TPVTW 278
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 126/256 (49%), Gaps = 13/256 (5%)
Query: 105 FDQLLDTPVVDVE------KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQ 158
+ Q++D+ D+ + + + DL R LK D S+ ++ C + + G
Sbjct: 173 YAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIH 232
Query: 159 CLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
I+TG +++V V S+L+ +Y+KC I A K F EMP R V+WT++I+ ++Q +
Sbjct: 233 ANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQ 292
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF--SYIQVANS 276
++L+ M S PN+ TF S+LSAC+ +G + + + +R + +
Sbjct: 293 DAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAER-YFDMMRNEYHIEPLVDHYGC 351
Query: 277 LISMYCKCGNVEEAV-YVFNNMHGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQR 332
++ M+ + G +++A ++ + W+S++AG HG LA A D E+ +
Sbjct: 352 MVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKV 411
Query: 333 VKPDAITFLGVISSCR 348
++ + IS+ R
Sbjct: 412 IETYVLLLNMYISTGR 427
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+LSAC+ + + G+ H +I+ G + + NSL +YCK G++E + F K+
Sbjct: 1 MLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKN 60
Query: 302 IVSWNSMIAGYAQ-HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
+++W +MI+ A+ + LF +M++ V P+ T V+S C + GK
Sbjct: 61 VITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQ 120
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K G + L + + L R G +EA ++M + + W A
Sbjct: 121 AFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMD-SSSIITWNA 168
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 216/396 (54%), Gaps = 25/396 (6%)
Query: 133 VDASFLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
V + F T + S + ++ G A++ G+ + V V +SLI +Y KC+ I DA +
Sbjct: 154 VPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALE 213
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+FE M +++ SW +I + Q D L L M + ++P+ T T++L AC+ A
Sbjct: 214 IFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAA 273
Query: 252 LGQGRSAHCQTIRMGF------FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
L GR H I G + + N++I MY KCG++ +A VF M KD+ SW
Sbjct: 274 LMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASW 333
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-A 364
N MI GY HG A+++F M + ++KPD +TF+GV+S+C H G V +G+ + M +
Sbjct: 334 NIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKS 393
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------E 408
K+ + P ++HY+CV+D+LGRAG L+EA + MPI N V+W E
Sbjct: 394 KYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAE 453
Query: 409 AAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
A R+ LEPE ++V ++N+Y V +++ VR M+ + ++ PGCSWIE+ N V
Sbjct: 454 VAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGV 513
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ F + D+++ I L+ L ++ GYVP+V
Sbjct: 514 HVFVSADRAHPEAYSIYAGLNSLTARLCEHGYVPDV 549
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 145/288 (50%), Gaps = 9/288 (3%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + E + D A+ +C I+ L + G +V++GS+L
Sbjct: 41 EEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSAL 97
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ Y K ++ A FEE+P+R+VV W A++ +AQ Q +M LE +R M + + P+
Sbjct: 98 VNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSR 157
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FT T ILS G L GR H ++MG+ S + V+NSLI MY KC +E+A+ +F
Sbjct: 158 FTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEM 217
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M KDI SWNS+ + + Q G + L + M+ ++PD +T V+ +C H + G
Sbjct: 218 MREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHG 277
Query: 357 KVYFDSMAKHGL---KPELDHY---SCVVDLLGRAGLLEEARDFIKQM 398
+ M GL ++D + V+D+ + G + +A ++M
Sbjct: 278 REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM 325
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 6/222 (2%)
Query: 179 LYSKCRVIIDAYKVFEEMPVR--NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+YSKC + A +F + P NV ++ AII+ F + E Y+ MRN + P+
Sbjct: 1 MYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDK 59
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
FTF + AC + + H + G + + ++L++ Y K G +E A F
Sbjct: 60 FTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEE 116
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
+ +D+V WN+M+ GYAQ G ++ F M + V P T G++S G + G
Sbjct: 117 LPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG 176
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++ K G + + ++D+ G+ +E+A + + M
Sbjct: 177 RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMM 218
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 280 MYCKCGNVEEAVYVFNN-MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY KC + A+ +F++ H ++ ++N++I+G+ +G + +++M + V PD
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
TF I +C V E K + K GL+ ++ S +V+ + GL+E A+ +++
Sbjct: 61 TFPCAIKACLD---VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 399 PIYPNAVIWEA 409
PI + V+W A
Sbjct: 118 PI-RDVVLWNA 127
>gi|255551609|ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 227/436 (52%), Gaps = 57/436 (13%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
++E + M ++ L+ D S +++C + G L IR+G+ + + +
Sbjct: 183 EIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKN 242
Query: 175 SLITLYSK---------------------CRVIIDAYK----------VFEEMPVRNVVS 203
S+++LY+K IIDAY +F+ +P +N+VS
Sbjct: 243 SILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVS 302
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
WT++I +A+ + L + M ++ P+DFTF ++L AC+ LG GR H I
Sbjct: 303 WTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAI 362
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
R GF +Y+ V N L++MY KCG+++ ++ F+++ KD+VS+N+++ + HG A A+
Sbjct: 363 RNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEALQ 422
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLL 382
L+E+MM KPD +TF+G++ +C H GL+EEG+++F+SM HGL E DH +C+VD+L
Sbjct: 423 LYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDML 482
Query: 383 GRAGLLEEARDFIKQMPIYPNAVIWEAAESRLL----------------------LEPEC 420
GR G L EA++ +K+ Y EA+ L LEP
Sbjct: 483 GRGGYLAEAKELVKK---YSKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTLEPNK 539
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
++V +NLY W +A VRK M D+GLK PGCSWIE+ N V F A +
Sbjct: 540 EISYVLQSNLYCVRGQWKEAEMVRKAMVDEGLKKMPGCSWIEVRNKVTAFVAGNHLYPYT 599
Query: 481 SEILPVLDFLVDQMKT 496
E+ L FL +M++
Sbjct: 600 DELYKTLYFLEFEMRS 615
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 149/335 (44%), Gaps = 62/335 (18%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ +S+ + + K D + +++C + G L I G+ +++ V +SL
Sbjct: 53 QEALSIFYQMRNTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSL 112
Query: 177 ITLYSKCRVIIDAYKVFEEM-------------------------------PVRNVVSWT 205
I +Y KC A +VF+EM P + ++W
Sbjct: 113 IDMYGKCFDAFSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWN 172
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
+IA + ++++CL+++R MR S+LEP+ +T+++++SACT S G H IR
Sbjct: 173 TMIAGLGRYGEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRS 232
Query: 266 GFFSYIQVANSLISMYCKCGN-------------------------------VEEAVYVF 294
G+ S ++ NS++S+Y K G+ V EA +F
Sbjct: 233 GWSSAMEAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMF 292
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
++ K+IVSW SMI GYA++G A+ F M PD TF V+ +C ++
Sbjct: 293 QSLPEKNIVSWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLG 352
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
G++ ++G L + +V++ + G L+
Sbjct: 353 HGRMVHGCAIRNGFSTYLYVGNGLVNMYAKCGDLD 387
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 31/261 (11%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
+N++ +S I+ I+ A K+F+EMP R+ V+W ++I +++Q L ++ M
Sbjct: 3 SNLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQM 62
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC--- 284
RN+ +P+ FTFT+ LSAC G+G+ G H I +G+ S + V NSLI MY KC
Sbjct: 63 RNTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDA 122
Query: 285 ----------------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
G EA +FN M K ++WN+MIAG ++G
Sbjct: 123 FSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYG 182
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+D+F EM + ++PD T+ +IS+C G + + + G ++ +
Sbjct: 183 EIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKN 242
Query: 377 CVVDLLGRAGLLEEARDFIKQ 397
++ L + G L +A ++
Sbjct: 243 SILSLYAKFGSLNDALKVVES 263
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 226/423 (53%), Gaps = 20/423 (4%)
Query: 113 VVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYV 172
V+++E + +++++ ++ D +C S R+I G + G +++V
Sbjct: 63 VMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGDLFV 122
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSM 231
+SLI +Y KC I + VFE M R+V SW+AIIAA A CL ++ M R
Sbjct: 123 QNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGS 182
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
P + S+LSACT GAL GR H +R + V SLI MY KCG +E+ +
Sbjct: 183 CRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGL 242
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F M K+ +S++ MI G A HG + A+ +F +M+++ +KPD + +LGV+S+C H G
Sbjct: 243 SLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAG 302
Query: 352 LVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-- 408
LV+EG F+ M +HG++P + HY C+V L+GRAG+L +A + I+ MPI PN V+W
Sbjct: 303 LVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGL 362
Query: 409 ---------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
AA+S L +V L+N+YA + W+ A++R M KG
Sbjct: 363 LSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGFT 422
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD-DAS 512
PG S +++ +Y+F ++D S+ + + ++ + Q+K GY P+ + D D
Sbjct: 423 QTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDEE 482
Query: 513 HKR 515
KR
Sbjct: 483 EKR 485
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 107/211 (50%), Gaps = 1/211 (0%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F ++ + +I + ++ L LY M +E ++FT+ ++ AC
Sbjct: 38 ACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACAS 97
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
++ +G H + G + V NSLI+MY KCG +E + VF +M +D+ SW+++
Sbjct: 98 LRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAI 157
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
IA +A G+ + +F EM ++ +P+ + V+S+C H G ++ G+ ++ ++
Sbjct: 158 IAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNI 217
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ + + ++D+ + G +E+ ++M
Sbjct: 218 REMNVIVQTSLIDMYVKCGCIEKGLSLFQRM 248
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G+++ A +F + +N+MI GY A+ L+ EM+++ V+ D T+ +
Sbjct: 33 GSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALF 92
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C +EEG + K GL+ +L + ++++ G+ G +E + + M +
Sbjct: 93 KACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMD-RRDV 151
Query: 405 VIWE---AAESRLLLEPECAATHVQLA 428
W AA + L + EC + +++
Sbjct: 152 ASWSAIIAAHASLGMWSECLSVFGEMS 178
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 231/390 (59%), Gaps = 27/390 (6%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC ++ G I+ GF ++++V ++LI LYS + A +F+E VR++
Sbjct: 42 LNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDL 101
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
VS+ +I +A+ Q + L L+ M+NS ++ T ++LSAC GA G+ + Q
Sbjct: 102 VSYNTMIKGYAEVNQPESALCLFGEMQNS----DEVTLVAVLSACARLGAFDLGKRLYHQ 157
Query: 262 TIRMGFFSYIQVANS-LISMYCKCGNVEEAVYVFNNMHGKDIVS---WNSMIAGYAQHGL 317
I G F+ + + ++ MY KCG+++ A+ +F + GK++ + +NSMIAG AQHGL
Sbjct: 158 YIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV-GKNMKTGFVFNSMIAGLAQHGL 216
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
AI +F E++ +KPD +TF+GV+ +C H GL+EEGK F+SM +G+KP+++HY
Sbjct: 217 GETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYG 276
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----------------AESRLL-LEPE 419
C+VDLLGR G LEEA D +++MP N+VIW A A +LL +E +
Sbjct: 277 CMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQ 336
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
A +V L+N+ A W++A +VRK+M+D G++ PG S+IE+ ++RF A DKS+ +
Sbjct: 337 HGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQ 396
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
EI +L + ++K+ GYVP + D
Sbjct: 397 GKEIELMLKDMAMRLKSAGYVPNTAQVMFD 426
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 204 WTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
W +I +++ + LY M+ + PN+FTF +L++C +L G H
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
I+ GF S + V N+LI +Y GN+ A +F+ +D+VS+N+MI GYA+ A+
Sbjct: 62 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL-KPELDHYSCVVDL 381
LF EM D +T + V+S+C G + GK + ++G+ + V+D+
Sbjct: 122 CLFGEMQNS----DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDM 177
Query: 382 LGRAGLLEEARDFIKQM 398
+ G ++ A + +++
Sbjct: 178 YAKCGSIDSALEIFRRV 194
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 197/343 (57%), Gaps = 17/343 (4%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
SL T+Y+KC + A +F++M N++ W A+I+ +A+ ++L+ M N + P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRP 321
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+ + TS +SAC G+L Q R R + + ++++LI M+ KCG+VE A VF
Sbjct: 322 DTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVF 381
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ +D+V W++MI GY HG A AI L+ M + V P+ +TFLG++ +C H G+V
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVR 441
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
EG +F+ MA H + P+ HY+C++DLLGRAG L++A + IK MP+ P +W
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
AA+ ++P +VQL+NLYA R WD+ A VR MK+KGL + G
Sbjct: 502 KKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVG 561
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
CSW+E+ + FR DKS+ R EI ++++ ++K G+V
Sbjct: 562 CSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 195/384 (50%), Gaps = 18/384 (4%)
Query: 41 SSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFG 100
++ +H +I T + ++H RL+ LQ S L ++ + + + TF
Sbjct: 14 TNSGIHSDSFYASLIDSSTHKAQLRQIHARLLVLGLQF-SGFLITKLIHASSSYGDITF- 71
Query: 101 SSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGS 147
+ VFD L V +I M+ + R+ D+ + +CG
Sbjct: 72 ARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGG 131
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWT 205
+++ G R GF A+V+V + LI LY+KCR + A VFE +P+ R +VSWT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWT 191
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
AI++A+AQ + LE++ MR ++P+ S+L+A T L QGRS H ++M
Sbjct: 192 AIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKM 251
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + + SL +MY KCG V A +F+ M +++ WN+MI+GYA++G A AIDLF
Sbjct: 252 GLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLF 311
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
EM+ + V+PD I+ IS+C G +E+ + + +++ + ++ S ++D+ +
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKC 371
Query: 386 GLLEEARDFIKQMPIYPNAVIWEA 409
G +E AR + + + V+W A
Sbjct: 372 GSVECARSVFDRT-LDRDVVVWSA 394
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 208/360 (57%), Gaps = 24/360 (6%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEWQVDMCLELYRM 226
++ V ++LI +YSKCR A +F+++P+ RNVV+WT +I AQ + L+L+
Sbjct: 452 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 511
Query: 227 MRNSM--LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF--SYIQVANSLISMYC 282
M + + PN +T + IL AC A+ G+ H +R + S VAN LI MY
Sbjct: 512 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 571
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCG+V+ A +VF++M K +SW SM+ GY HG A+D+F++M K PD ITFL
Sbjct: 572 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 631
Query: 343 VISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V+ +C H G+V++G YFDSM A +GL P +HY+C +DLL R+G L++A +K MP+
Sbjct: 632 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPME 691
Query: 402 PNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVR 444
P AV+W E A ++L+ + E ++ ++N+YA W AR+R
Sbjct: 692 PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIR 751
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVH 504
LMK G+K PGCSW++ F D+S+ +I +L+ L+D++K +GYVPE +
Sbjct: 752 HLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETN 811
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 130/253 (51%), Gaps = 9/253 (3%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R + D L + +CG + R G+ + L GF +NV++ ++L+ +YS+C +
Sbjct: 155 RAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 214
Query: 188 DAYKVFEEMPVR---NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-PND-----FT 238
+A +F+E+ R +V+SW +I++A + L+L+ M + E P + +
Sbjct: 215 EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 274
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+IL AC A+ Q + H IR G F + V N+LI Y KCG +E AV VFN M
Sbjct: 275 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 334
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
KD+VSWN+M+AGY+Q G A +LF+ M K+ + D +T+ VI+ G E
Sbjct: 335 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 394
Query: 359 YFDSMAKHGLKPE 371
F M G P
Sbjct: 395 LFRQMIFSGSLPN 407
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 143/308 (46%), Gaps = 51/308 (16%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +CGS + + AIR G +V+VG++LI Y+KC ++ +A KVF M ++V
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 338
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE---------------------------- 233
VSW A++A ++Q + EL++ MR +
Sbjct: 339 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQ 398
Query: 234 -------PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY----------IQVANS 276
PN T S+LSAC GA QG H +++ + + V N+
Sbjct: 399 MIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 458
Query: 277 LISMYCKCGNVEEAVYVFNN--MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-- 332
LI MY KC + + A +F++ + +++V+W MI G+AQ+G + A+ LF EM+ +
Sbjct: 459 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 518
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY--SCVVDLLGRAGLLEE 390
V P+A T ++ +C H + GK + +H ++ +C++D+ + G ++
Sbjct: 519 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDT 578
Query: 391 ARDFIKQM 398
AR M
Sbjct: 579 ARHVFDSM 586
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 121/253 (47%), Gaps = 10/253 (3%)
Query: 166 FIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
FI+ +G+ ++ Y C A V E + V W +I ++ ++D + +
Sbjct: 92 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M + P+ FT +L AC + G + H GF S + + N+L++MY +CG
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 211
Query: 286 NVEEAVYVFNNMHGK---DIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQRVKP-----D 336
++EEA +F+ + + D++SWNS+++ + + A A+DLF +M + KP D
Sbjct: 212 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 271
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
I+ + ++ +C V + K + ++G P++ + ++D + GL+E A
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331
Query: 397 QMPIYPNAVIWEA 409
M + + V W A
Sbjct: 332 MME-FKDVVSWNA 343
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 233/458 (50%), Gaps = 66/458 (14%)
Query: 104 VFDQLLDTPVVDVEKLISMHHDLHRER-------------LKVDASFLSTAVTSCGSTRN 150
+FD++ + V+ V LI HR +K + +T + S +N
Sbjct: 55 LFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSSTGLKN 114
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSK-CRV------------------------ 185
I G ++ G V+VGS+++ Y+K C
Sbjct: 115 IYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHG 174
Query: 186 ------IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
I DA ++F+EMP RNVVSW A++ F+Q + + L+ M PN TF
Sbjct: 175 YLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTF 234
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+++ +LG G+S H ++ S + V NSL+S Y KCG++E+++ VFN +
Sbjct: 235 PCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPD 294
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
++ VSWN++I G+AQ+G A+ FE M ++P+++T LG++ +C H GLVE+G +Y
Sbjct: 295 RNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCACNHAGLVEKGYMY 354
Query: 360 FDSMAKHG---LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-------- 408
F+ M + LKPE HY+C+VDLL R G L+EA F+ +P P W+
Sbjct: 355 FNQMRQEEPGILKPE--HYACMVDLLSRFGRLKEAAKFLHDLPFDPGTGFWKALLGGCHI 412
Query: 409 ---------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCS 459
AA+ L L+PE +++V L+N Y+ W Q + +R+ MK+KGLK PGCS
Sbjct: 413 HSNAELSDLAAQKILALDPEDVSSYVMLSNAYSAAGRWQQVSTIRREMKEKGLKRIPGCS 472
Query: 460 WIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
WIE+ + ++ F DK++ + EI L F V+Q++ +
Sbjct: 473 WIEVRSKIHVFLNSDKNHHQKEEIYSFLKFCVEQLREI 510
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 32/260 (12%)
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFT 240
SK + +D ++F+EMP +V+S T +I FA++ + + + L+ M ++PN+FTF
Sbjct: 44 SKSNIRMDVDELFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFA 103
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGF--------------------------FSYIQVA 274
+++ + TG + G+ H +T++MG F IQ
Sbjct: 104 TVIHSSTGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKP 163
Query: 275 N-----SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
N +LI Y K G +++A+ +F M +++VSWN+M+ G++Q G A+ LF EM+
Sbjct: 164 NVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEML 223
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
++ P+ TF I+S + + GK + K ++ + +V + G +E
Sbjct: 224 REGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSME 283
Query: 390 EARDFIKQMPIYPNAVIWEA 409
++ ++P N V W A
Sbjct: 284 DSLLVFNELPDR-NTVSWNA 302
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/458 (32%), Positives = 239/458 (52%), Gaps = 62/458 (13%)
Query: 100 GSSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCG 146
S VF+ L + VV LIS + + + ++ + +D L+T + C
Sbjct: 178 ASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCE 237
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE------------ 194
NI G ++TG ++V VG++ +++Y+KC A FE
Sbjct: 238 GETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTT 297
Query: 195 -------------------EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
MP RNV+SW A++ A+ Q + L+LY +M + P+
Sbjct: 298 MITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPD 357
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF +++ AC+ G Q +++G S + V NS I++Y +CG +EEA +F+
Sbjct: 358 WITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFD 417
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
++ K+++SWNS++ GYAQ+G ++ I++F+ M+ KPD IT++ ++S C H GLV+E
Sbjct: 418 SIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKE 477
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------- 407
K +F+SM K G+ L+H+ C+VDL GRAGLL+ A D I QMP PNA IW
Sbjct: 478 AKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSAC 537
Query: 408 ---------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
E A LL L E +++ LAN Y+ + + VR++MK+K ++ +PG
Sbjct: 538 RIHHDTEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPG 597
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
CSWIE+ N V+ F A D S+ ++ +I L+ +V ++K
Sbjct: 598 CSWIEVCNRVHVFTANDTSHPQVKDIYKALEDIVKKIK 635
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 154/351 (43%), Gaps = 45/351 (12%)
Query: 103 NVFDQLLDTPVVDVEKLISM--HHDLHRERLKV-----------DASFLSTAVTSCGSTR 149
+ F Q+ + V +IS HH LH + L ++ ++ +++C +
Sbjct: 80 DTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANIY 139
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
+ + G +R +V VG+ L+ +Y+KC +I + +VF + NVV+WT++I+
Sbjct: 140 DFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLIS 199
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
A + +++ MR + ++F +IL C G + G H T++ G S
Sbjct: 200 GIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNS 259
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE-- 327
+ V N+ +SMY KCG+ E+A F M D++SW +MI ++ G RA D F
Sbjct: 260 SVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMP 319
Query: 328 -----------------------------MMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
M++Q V+PD ITF+ +I +C + + G
Sbjct: 320 ERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQ 379
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K GL ++ + + L R G +EEA++ + N + W +
Sbjct: 380 ILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQ-EKNLISWNS 429
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 134/332 (40%), Gaps = 71/332 (21%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF---------- 193
+C S IR L+ + GF N + +S+I +Y KC I A +VF
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 194 ---------------------EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSML 232
+MP R+ VSW II+AF+ L + M
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+PN T+ S+LSAC G+ H + +R+ F + V N L+ MY KCG ++ +
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR---- 348
VFN + ++V+W S+I+G A G D+F +M K V D ++ C
Sbjct: 182 VFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETN 241
Query: 349 -------HG------------------------GLVEEGKVYFDSMAKHGLKPELDHYSC 377
HG G E+ + F++MA H ++ ++
Sbjct: 242 ISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAH----DVISWTT 297
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
++ +G +E ARD+ +MP N + W A
Sbjct: 298 MITSFSHSGNVERARDYFNRMP-ERNVISWNA 328
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 202/350 (57%), Gaps = 18/350 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV ++++T Y++ ++ +A +F MP ++ VSW A++AA++Q + L+L++ M
Sbjct: 385 NVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMG 444
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
N F +LS C AL G H + I+ G+ V N+L++MY KCG++E
Sbjct: 445 RCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSME 504
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
EA F M +D+VSWN+MIAGYA+HG A+++F+ M K KPD IT +GV+++C
Sbjct: 505 EAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACS 564
Query: 349 HGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLVE+G YF SM + G+ + +HY+C++DLLGRAG L+EA + +K MP P++ +W
Sbjct: 565 HSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMW 624
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
AAE LEPE A +V L+N+YA W ++R +M ++
Sbjct: 625 GALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHER 684
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
G+K PG SWIE+ N V+ F D + +I L+ L +MK GYV
Sbjct: 685 GVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYV 734
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + ++ R V+ S + +++C + G I+ G+ +VG++L
Sbjct: 434 EETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNAL 493
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC + +A+ FEEM R+VVSW +IA +A+ LE++ MR + +P+D
Sbjct: 494 LAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDD 553
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T +L+AC+ SG + +G S R G + + +I + + G ++EAV +
Sbjct: 554 ITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMK 613
Query: 296 NM-HGKDIVSWNSMIAGYAQH 315
+M D W +++ H
Sbjct: 614 DMPFEPDSTMWGALLGASRIH 634
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ D +F+EMPV++ VS+ +I++ A V + + + E + ++ +L+A
Sbjct: 185 LADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLA----PEKDAVSWNGMLAA 240
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
+G + + R S+ N+L++ Y + +EEA +FN M +D+VSW
Sbjct: 241 YVRNGRIQEARELFDSRTEWDAISW----NALMAGYVQRSQIEEAQKMFNKMPQRDVVSW 296
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKP--DAITFLGVISSCRHGGLVEEGKVYFDSM 363
N+M++GYA+ G A LF+ V P D T+ ++S G++EE K FD+M
Sbjct: 297 NTMVSGYARRGDMAEARRLFD------VAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAM 350
Query: 364 AKHGLKPELD--HYSCVVDLLGRAGLLEEARDFIKQMP 399
P+ + ++ ++ + ++EEA++ MP
Sbjct: 351 ------PDKNAVSWNAMMAAYVQRRMMEEAKELFDAMP 382
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 12/216 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++L+ Y + I +A K+F +MP R+VVSW +++ +A+ + DM E R+ + +
Sbjct: 266 NALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYAR--RGDMA-EARRLFDVAPIR 322
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
+ FT+T+I+S +G L + + S+ N++++ Y + +EEA +
Sbjct: 323 -DVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSW----NAMMAAYVQRRMMEEAKEL 377
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F+ M +++ SWN+M+ GYAQ G+ A +F MM Q+ DA+++ ++++ G
Sbjct: 378 FDAMPCRNVASWNTMLTGYAQAGMLDEARAIF-GMMPQK---DAVSWAAMLAAYSQIGFS 433
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
EE F M + G ++CV+ LE
Sbjct: 434 EETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALE 469
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 120/234 (51%), Gaps = 17/234 (7%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+I+ ++ ++ A F+ P ++ VSW ++AA+ + ++ EL+ +S E +
Sbjct: 206 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF----DSRTEWD 261
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++ ++++ + + + + + S+ N+++S Y + G++ EA +F+
Sbjct: 262 AISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSW----NTMVSGYARRGDMAEARRLFD 317
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+D+ +W ++++GYAQ+G+ A +F+ M + +A+++ ++++ ++EE
Sbjct: 318 VAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK----NAVSWNAMMAAYVQRRMMEE 373
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
K FD+M + ++ ++ +AG+L+EAR MP +AV W A
Sbjct: 374 AKELFDAMPCRNVA----SWNTMLTGYAQAGMLDEARAIFGMMP-QKDAVSWAA 422
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 39/232 (16%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
I +V+ +++++ Y++ ++ +A +VF+ MP +N VSW A++AA+ Q ++ EL+
Sbjct: 321 IRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDA 380
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M C+ + N++++ Y + G
Sbjct: 381 M-------------------------------PCRN--------VASWNTMLTGYAQAGM 401
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++EA +F M KD VSW +M+A Y+Q G + + LF+EM + + F V+S+
Sbjct: 402 LDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLST 461
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
C +E G + K G + ++ + + G +EEA ++M
Sbjct: 462 CADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEM 513
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 44/168 (26%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N I+ + + G V +A +F M + ++N+M+AGYA +G +A+ F + +
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSI----PR 166
Query: 335 PDAITF------LGV-------------------------ISSCRHGGLVEEGKVYFDSM 363
PD+ ++ LGV ISS + GLV + YFD
Sbjct: 167 PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFD-- 224
Query: 364 AKHGLKPELD--HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L PE D ++ ++ R G ++EAR+ + +A+ W A
Sbjct: 225 ----LAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEW-DAISWNA 267
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 216/394 (54%), Gaps = 19/394 (4%)
Query: 128 RERLKVDASF-LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVI 186
RE V F LS+ + C + G L ++ GF ++YV ++LI +Y+KC +
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 187 IDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSAC 246
A K+F E+ +N VSW +I + + ++R + + + TF+S L AC
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
++ G H I+ + V+NSLI MY KCG+++ A VFN M D+ SWN
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK- 365
++I+GY+ HGL +A+ + + M + KP+ +TFLGV+S C + GL+++G+ F+SM +
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---------------- 409
HG++P L+HY+C+V LLGR+G L++A I+ +P P+ +IW A
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
Query: 410 -AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AE L + P+ AT+V ++N+YAG + W A +RK MK+ G+K PG SWIE V+
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 699
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
F + + I +L++L + GYVP+
Sbjct: 700 YFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPD 733
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 18/294 (6%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++T ++ + VG L+ LY++ + DA+KVF EMP +VV W+ +IA F Q + +
Sbjct: 274 LKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAV 333
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L+ MR + + PN+FT +SIL+ C G G H +++GF I V+N+LI +Y
Sbjct: 334 DLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY 393
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KC ++ AV +F + K+ VSWN++I GY G +A +F E ++ +V +TF
Sbjct: 394 AKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFS 453
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
+ +C ++ G K ++ + ++D+ + G ++ A+ +M
Sbjct: 454 SALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI 513
Query: 402 PNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ W A L + Y+ QA R+ +MKD+ K N
Sbjct: 514 -DVASWNA-----------------LISGYSTHGLGRQALRILDIMKDRDCKPN 549
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++ G+ +N +VG++LI YS C + A VFE + +++V W I++ + + + L
Sbjct: 173 VKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSL 232
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+L MR + PN++TF + L A G GA + H Q ++ + +V L+ +Y
Sbjct: 233 KLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLY 292
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+ G++ +A VFN M D+V W+ MIA + Q+G A+DLF M + V P+ T
Sbjct: 293 TQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLS 352
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
+++ C G G+ + K G ++ + ++D+ + ++ A ++
Sbjct: 353 SILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS-S 411
Query: 402 PNAVIW 407
N V W
Sbjct: 412 KNEVSW 417
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 2/226 (0%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K SM + R ++ V S+A+ +C S ++ G LAI+T V V +SLI
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLI 491
Query: 178 TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDF 237
+Y+KC I A VF EM +V SW A+I+ ++ L + +M++ +PN
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGL 551
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF +LS C+ +G + QG+ IR G ++ ++ + + G +++A+ +
Sbjct: 552 TFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEG 611
Query: 297 M-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+ + ++ W +M++ A EE++K K +A L
Sbjct: 612 IPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVL 657
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C ++ G +++ + L+ Y K DA +F+EMP RN VS+ + AQ +
Sbjct: 72 HCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTL----AQGYAC 127
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+ LY + E N FTS L H +++G+ S V +L
Sbjct: 128 QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAAL 187
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
I+ Y CG+V+ A VF + KDIV W +++ Y ++G ++ L M P+
Sbjct: 188 INAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNN 247
Query: 338 ITF 340
TF
Sbjct: 248 YTF 250
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 209/372 (56%), Gaps = 21/372 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMM 227
NV +SL++ YS+ ++ +A++VFE MP + N VSW A+IA F + + L+R M
Sbjct: 165 NVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRM 224
Query: 228 R-NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
R +E + F ++LSACTG GAL QG H + G ++A ++I MYCKCG
Sbjct: 225 RVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGC 284
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR-VKPDAITFLGVIS 345
+++A +VF + K + SWN MI G+A HG AI LF+EM ++ V PD+ITF+ V++
Sbjct: 285 LDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLT 344
Query: 346 SCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
+C H GLVEEG YF M HG+ P +HY C+VDLL RAG LEEA+ I +MP+ P+A
Sbjct: 345 ACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDA 404
Query: 405 VIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
+ E + L+PE + +V L N+YA W+Q A VRKLM
Sbjct: 405 AVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLM 464
Query: 448 KDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEK 507
D+G+K PG S IE+ VV F A + + I + +++ ++ +G+VP+
Sbjct: 465 DDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDGVL 524
Query: 508 VDDASHKRTEPF 519
D +R P
Sbjct: 525 HDLVEEERENPL 536
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 10/219 (4%)
Query: 160 LAIRTGFIANVYVGSSLITL--YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
L +R G N + S + T SK I A K+F +P + + + AF Q
Sbjct: 24 LLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLYNTLFKAFFSLSQT 83
Query: 218 -DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
+ L Y M + PN FTF S++ AC + + H ++ GF N+
Sbjct: 84 PSLSLLFYSHMLQHCVTPNAFTFPSLIRACKLEE---EAKQLHAHVLKFGFGGDTYALNN 140
Query: 277 LISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
LI +Y G++++A VF M ++VSW S+++GY+Q GL A +FE M K +
Sbjct: 141 LIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVFELM---PCKKN 197
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
++++ +I+ G E F M K ELD +
Sbjct: 198 SVSWNAMIACFVKGNRFREAFALFRRMRVEK-KMELDRF 235
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 210/393 (53%), Gaps = 18/393 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ + E +++D S + +C + G ++ G + V VG+ L+
Sbjct: 197 LALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDF 256
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC + A K FE + N VSW+A+I + Q + + L+ + +R ++ N FT+
Sbjct: 257 YVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTY 316
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
TSI AC+ G AH I+ +Y +++I+MY +CG ++ A VF ++
Sbjct: 317 TSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDD 376
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
D V+W ++IAGYA G A A+ LF M V+P+A+TF+ V+++C H GLV EG+ Y
Sbjct: 377 PDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQY 436
Query: 360 FDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------- 408
+SM + +G+ +DHY C+VD+ RAG L+EA + I+ MP P+A+ W+
Sbjct: 437 LESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYR 496
Query: 409 -------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AAE+ L+PE A ++ + NLYA W +AA VRK+M ++ L+ CSWI
Sbjct: 497 NLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWI 556
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
+ V+RF DK + + EI L+ L D +
Sbjct: 557 TVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSV 589
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 3/250 (1%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDM 219
AIR+G +N V +++ +Y KC + A VFE+M +N V+WT I+ + Q E Q+D
Sbjct: 137 AIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMD- 195
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L L+ M N +E +++ F+ +L AC G L GR H +++G S + V L+
Sbjct: 196 ALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVD 255
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
Y KC N+E A F + + VSW+++I GY Q G A+ FE + + V ++ T
Sbjct: 256 FYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFT 315
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ + +C G K L S ++ + R G L+ A + +
Sbjct: 316 YTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESID 375
Query: 400 IYPNAVIWEA 409
P+AV W A
Sbjct: 376 D-PDAVAWTA 384
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+CG +++ G + RT ++ +S++ +Y KC + DA KVF+EM RN+VS
Sbjct: 19 ACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVS 78
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W II+A+A+ D ++ M +PN T+ L + L G+ H I
Sbjct: 79 WNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAI 138
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
R G S V ++ +MY KCG +E A VF M K+ V+W ++ GY Q + A+
Sbjct: 139 RSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALA 198
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
LF +M+ + V+ D F V+ +C + G+ + K GL+ E+ + +VD
Sbjct: 199 LFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYV 258
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ LE A + + PN V W A
Sbjct: 259 KCSNLESATKAFEWIS-EPNDVSWSA 283
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 105/199 (52%), Gaps = 2/199 (1%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ E+ + L + +++ ++ +C + + GA AI++ +A + S
Sbjct: 293 EFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGES 352
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++IT+YS+C + A +VFE + + V+WTAIIA +A + L+L+R M++ + P
Sbjct: 353 AMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRP 412
Query: 235 NDFTFTSILSACTGSGALGQGRS-AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
N TF ++L+AC+ SG + +GR + G + I + ++ +Y + G ++EA+ +
Sbjct: 413 NAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALEL 472
Query: 294 FNNM-HGKDIVSWNSMIAG 311
+M D +SW ++ G
Sbjct: 473 IRSMPFSPDAMSWKCLLGG 491
>gi|225217011|gb|ACN85298.1| EMB2261 putative [Oryza coarctata]
Length = 621
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 206/351 (58%), Gaps = 20/351 (5%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D + +T+ G+ + G + G NV V SS + +Y+KCR+I++A
Sbjct: 234 VRPDGCTFGSMMTALGNLKMGNRGRQAHAQVVTRGLCGNVIVESSTLDMYAKCRMIVEAR 293
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
KVF+ M VRN VSW A++ + Q + + + L+R M + + ++ ++L AC G
Sbjct: 294 KVFDRMQVRNAVSWCALLGGYCQNGEYEKVVALFREMDKD--DDDWYSLGTVLRACAGLS 351
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
++ G+ HC+ +RMG + + V ++L+ +Y KCG V+ A VF ++ ++WN+MI
Sbjct: 352 SVNPGKEIHCRFLRMGGWRNVVVESALVDLYAKCGAVDYAYGVFEASIVRNTITWNAMIG 411
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLK 369
G+AQ+G RAIDLF+ M+K+ +PD I+F+GV+ +C H G+VE+G+ YF+SM+K + +
Sbjct: 412 GFAQNGHGERAIDLFDRMVKEGPRPDYISFVGVLFACSHTGMVEQGRKYFNSMSKDYSIT 471
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AES 412
P ++HY+C+VDLL R LLEEA D I + P ++ +W A A+
Sbjct: 472 PGIEHYNCMVDLLSRVELLEEAEDLINKSPFRDDSSLWAAILGASATHSNPDVAERVAKK 531
Query: 413 RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
+ LEP+ ++V L N+Y V W+ A +R LMK + +K PG SWI++
Sbjct: 532 TMELEPQYHLSYVLLENVYRTVGRWEDALDIRSLMKSRKVKKEPGMSWIDV 582
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 4/277 (1%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+A S AV +C R+ GA + GF + V S+L+ +Y DA K F
Sbjct: 135 NAHAFSAAVKACAVLRDRNAGACLHGSILVRGFGDDDIVLSALVDMYGHAAAPGDARKAF 194
Query: 194 EEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
EEM + + +T++I+AF + +W + M+ + + P+ TF S+++A
Sbjct: 195 EEMRTPDGICYTSLISAFVRNDWFEEAVRWSRSMLMLNGVRPDGCTFGSMMTALGNLKMG 254
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+GR AH Q + G + V +S + MY KC + EA VF+ M ++ VSW +++ GY
Sbjct: 255 NRGRQAHAQVVTRGLCGNVIVESSTLDMYAKCRMIVEARKVFDRMQVRNAVSWCALLGGY 314
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+G + + LF EM K D + V+ +C V GK + G +
Sbjct: 315 CQNGEYEKVVALFREMDKD--DDDWYSLGTVLRACAGLSSVNPGKEIHCRFLRMGGWRNV 372
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S +VDL + G ++ A + + I N + W A
Sbjct: 373 VVESALVDLYAKCGAVDYAYG-VFEASIVRNTITWNA 408
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 19/248 (7%)
Query: 171 YVGSSLITLYSKC-RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
Y+ ++L+ Y + R + A + F+++P R+VV+ ++I+AAF + L R M
Sbjct: 68 YLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAFLRAGMPRRALSSLRSMLA 127
Query: 230 SM--LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ PN F++ + AC G H + GF V ++L+ MY
Sbjct: 128 GADDVSPNAHAFSAAVKACAVLRDRNAGACLHGSILVRGFGDDDIVLSALVDMYGHAAAP 187
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE--------MMKQRVKPDAIT 339
+A F M D + + S+I+ + ++ D FEE +M V+PD T
Sbjct: 188 GDARKAFEEMRTPDGICYTSLISAFVRN-------DWFEEAVRWSRSMLMLNGVRPDGCT 240
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
F ++++ + + G+ + GL + S +D+ + ++ EAR +M
Sbjct: 241 FGSMMTALGNLKMGNRGRQAHAQVVTRGLCGNVIVESSTLDMYAKCRMIVEARKVFDRMQ 300
Query: 400 IYPNAVIW 407
+ NAV W
Sbjct: 301 VR-NAVSW 307
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 234/429 (54%), Gaps = 23/429 (5%)
Query: 87 KFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCG 146
K ++ + N+ +S + +L+ + + LIS + +ER++ D L + C
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLIS---SMRKERVETDEVTLVNILQICK 362
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+ C+ IR G AN V S+LI Y+KC +I A++VF M R+VVSW+
Sbjct: 363 YFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWST 422
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I+ FA + D + +Y+ M +++PN T ++L AC+ + L + + AH IR G
Sbjct: 423 MISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQG 482
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
F S + V +++ MY KCG + + F+ + K+IV+W++MIA Y +GLA A+ LF
Sbjct: 483 FASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFA 542
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRA 385
EM + +KP+ +T L V+++C HGGLVEEG F SM + GL+P +HYSC+VD+LGRA
Sbjct: 543 EMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRA 602
Query: 386 GLLEEARDFIKQMP--IYPNAVIW-----------------EAAESRLLLEPECAATHVQ 426
G L+ A + IK MP + A IW EA L LEP +A ++
Sbjct: 603 GKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLV 662
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
+++YA WD AAR+R L K+KG+K G S + I N RF A D S+ R EI +
Sbjct: 663 ASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPRSDEIFSM 722
Query: 487 LDFLVDQMK 495
L D +K
Sbjct: 723 AQQLHDCIK 731
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 156/326 (47%), Gaps = 18/326 (5%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D + + + +C S+R++ G L I GF +++V +SLI +YSKC+ A+
Sbjct: 246 IEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAF 305
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
KVF E+ RN VSW ++++ F L MR +E ++ T +IL C
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFV 365
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+S HC IR G + V ++LI Y KC +E A VF M +D+VSW++MI+
Sbjct: 366 HPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMIS 425
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G+A G AI +++EM + VKP+ IT + ++ +C ++ K + G
Sbjct: 426 GFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFAS 485
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANL 430
E+ + VVD+ + G + +R Q+ + N V W A + + H LA L
Sbjct: 486 EVTVGTAVVDMYSKCGEILASRRAFDQLAL-KNIVTWSAMIAAYGMN---GLAHEALA-L 540
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNP 456
+A MK GLK NP
Sbjct: 541 FAE-------------MKRHGLKPNP 553
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I++GF A V +SL+++Y + A ++F+EM ++V++W+ +I + Q + + L
Sbjct: 176 IKSGFWAISSVQNSLLSMYVDADMEC-ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGL 234
Query: 222 ELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+++R M+ +EP+ S+L AC S + GR H I GF + V NSLI M
Sbjct: 235 QMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDM 294
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KC + A VFN + ++ VSWNSM++G+ + A L M K+RV+ D +T
Sbjct: 295 YSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTL 354
Query: 341 LGVISSCRH 349
+ ++ C++
Sbjct: 355 VNILQICKY 363
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 5/271 (1%)
Query: 117 EKLISMHHDLHRERLK-VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
++++S +H++ + ++ VD S + + + G + + CL I+ GF + +G+S
Sbjct: 29 QEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACL-IKQGFDSFTSIGNS 87
Query: 176 LITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++ Y +C A VF M R+ VSW +I + L + R + EP
Sbjct: 88 IMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEP 147
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T ++ AC G G H I+ GF++ V NSL+SMY ++E A +F
Sbjct: 148 NISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELF 206
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLV 353
+ MH KD+++W+ MI GY Q + +F +M + ++PD + + V+ +C V
Sbjct: 207 DEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDV 266
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
G++ + G +L + ++D+ +
Sbjct: 267 CTGRLVHGLVIHRGFDCDLFVENSLIDMYSK 297
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 205/348 (58%), Gaps = 19/348 (5%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C S ++R G +++GF + V L+ +Y + +A VF+ + R+V SW
Sbjct: 474 CTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSW 533
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
T +++ +A+ + + +E +R M PND T + LS C+ LG G H TI+
Sbjct: 534 TVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIK 593
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
G+ S + V+++L+ MY KCGN+ +A +F+ D+V WN++I GYAQHG +A++
Sbjct: 594 SGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEA 652
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLG 383
F+EM+ + PD ITF+GV+S+C H GL++EG+ YF ++ +G+ P L+HY+C+VD+L
Sbjct: 653 FQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILA 712
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQ 426
+AG L EA I +MP+ P+A +W+ AAE +P+ ++ +
Sbjct: 713 KAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCIL 772
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
L+N+YA ++ W+ A++R ++ D+G+K PGCSWIEI ++ F ++D
Sbjct: 773 LSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLSQD 820
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 134/273 (49%), Gaps = 3/273 (1%)
Query: 129 ERLKVDASFL---STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
ERL++ A L + A+ C ++R +R G +R+G + ++ SL+ +Y KC
Sbjct: 51 ERLRLRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGR 110
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA VF+ MP R+VV+WTA+++A L L+ M + PN F + L A
Sbjct: 111 LADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKA 170
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
CT LG H Q +++ V++SL+ Y CG V+ A + + VSW
Sbjct: 171 CTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSW 230
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N+++ YA+ G + + +F+++++ + T V+ C GL + G+ + K
Sbjct: 231 NALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIK 290
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
GL+ + +C++++ + E+A + ++
Sbjct: 291 RGLETDRVLNNCLIEMYSKCLSAEDAYEVFARI 323
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 131/272 (48%), Gaps = 3/272 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L T + C + G L I+ G + + + LI +YSKC DAY+VF +
Sbjct: 265 LPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARID 324
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
+VV + +I+ F + +++ M + ++PN +TF + + +G + RS
Sbjct: 325 EPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRS 384
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++ GF V ++++ MY K G V++A+ F+ M G DI SWN++++G+
Sbjct: 385 IHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNN 444
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSC 377
+ +F+E++ + V + T++G++ C + G + K G + + D
Sbjct: 445 CEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKM 504
Query: 378 VVDLLGRAGLLEEAR---DFIKQMPIYPNAVI 406
++D+ +AG AR D +K+ ++ V+
Sbjct: 505 LLDMYVQAGCFTNARLVFDRLKERDVFSWTVV 536
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 149/345 (43%), Gaps = 18/345 (5%)
Query: 111 TPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV 170
T D + + ++ E + + L+ A+ +C ++ A++ + +
Sbjct: 137 TAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDP 196
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
YV SSL+ Y C + A + + PVR+ VSW A++ +A++ + ++ + S
Sbjct: 197 YVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVES 256
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
E + +T ++L C G G++ H I+ G + + N LI MY KC + E+A
Sbjct: 257 GDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDA 316
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF + D+V + MI+ + +H +A A D+F +M VKP+ TF+G+
Sbjct: 317 YEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRT 376
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAA 410
G V + + K G +V + + G +++A
Sbjct: 377 GDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDA-----------------IL 419
Query: 411 ESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
L+ P+ A+ + L+ Y+G C + R+ K + +G+ N
Sbjct: 420 AFDLMQGPDIASWNTLLSGFYSGNNC-EHGLRIFKELICEGVLAN 463
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 1/230 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+++GF V +++ +Y K + DA F+ M ++ SW +++ F + L
Sbjct: 390 VKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGL 449
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+++ + + N +T+ IL CT L G H ++ GF V+ L+ MY
Sbjct: 450 RIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMY 509
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
+ G A VF+ + +D+ SW +++ YA+ +AI+ F M+++ +P+ T
Sbjct: 510 VQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLA 569
Query: 342 GVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+S C + G K G + S +VD+ + G L +A
Sbjct: 570 TSLSVCSDLACLGSGLQLHSYTIKSGWNSSVVS-SALVDMYVKCGNLADA 618
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 234/429 (54%), Gaps = 23/429 (5%)
Query: 87 KFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCG 146
K ++ + N+ +S + +L+ + + LIS + +ER++ D L + C
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLIS---SMRKERVETDEVTLVNILQICK 362
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+ C+ IR G AN V S+LI Y+KC +I A++VF M R+VVSW+
Sbjct: 363 YFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWST 422
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I+ FA + D + +Y+ M +++PN T ++L AC+ + L + + AH IR G
Sbjct: 423 MISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQG 482
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
F S + V +++ MY KCG + + F+ + K+IV+W++MIA Y +GLA A+ LF
Sbjct: 483 FASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFA 542
Query: 327 EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRA 385
EM + +KP+ +T L V+++C HGGLVEEG F SM + GL+P +HYSC+VD+LGRA
Sbjct: 543 EMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRA 602
Query: 386 GLLEEARDFIKQMP--IYPNAVIW-----------------EAAESRLLLEPECAATHVQ 426
G L+ A + IK MP + A IW EA L LEP +A ++
Sbjct: 603 GKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLV 662
Query: 427 LANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPV 486
+++YA WD AAR+R L K+KG+K G S + I N RF A D S+ R EI +
Sbjct: 663 ASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPRSDEIFSM 722
Query: 487 LDFLVDQMK 495
L D +K
Sbjct: 723 AQQLHDCIK 731
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 156/326 (47%), Gaps = 18/326 (5%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ D + + + +C S+R++ G L I GF +++V +SLI +YSKC+ A+
Sbjct: 246 IEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAF 305
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
KVF E+ RN VSW ++++ F L MR +E ++ T +IL C
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFV 365
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+S HC IR G + V ++LI Y KC +E A VF M +D+VSW++MI+
Sbjct: 366 HPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMIS 425
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G+A G AI +++EM + VKP+ IT + ++ +C ++ K + G
Sbjct: 426 GFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFAS 485
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANL 430
E+ + VVD+ + G + +R Q+ + N V W A + + H LA L
Sbjct: 486 EVTVGTAVVDMYSKCGEILASRRAFDQLAL-KNIVTWSAMIAAYGMN---GLAHEALA-L 540
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNP 456
+A MK GLK NP
Sbjct: 541 FAE-------------MKRHGLKPNP 553
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I++GF A V +SL+++Y + A ++F+EM ++V++W+ +I + Q + + L
Sbjct: 176 IKSGFWAISSVQNSLLSMYVDADMEC-ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGL 234
Query: 222 ELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+++R M+ +EP+ S+L AC S + GR H I GF + V NSLI M
Sbjct: 235 QMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDM 294
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KC + A VFN + ++ VSWNSM++G+ + A L M K+RV+ D +T
Sbjct: 295 YSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTL 354
Query: 341 LGVISSCRH 349
+ ++ C++
Sbjct: 355 VNILQICKY 363
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 5/271 (1%)
Query: 117 EKLISMHHDLHRERLK-VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
++++S +H++ + ++ VD S + + + G + + CL I+ GF + +G+S
Sbjct: 29 QEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACL-IKQGFDSFTSIGNS 87
Query: 176 LITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++ Y +C A VF M R+ VSW +I + L + R + EP
Sbjct: 88 IMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEP 147
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T ++ AC G G H I+ GF++ V NSL+SMY ++E A +F
Sbjct: 148 NISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELF 206
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQRVKPDAITFLGVISSCRHGGLV 353
+ MH KD+++W+ MI GY Q + +F +M + ++PD + + V+ +C V
Sbjct: 207 DEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDV 266
Query: 354 EEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
G++ + G +L + ++D+ +
Sbjct: 267 CTGRLVHGLVIHRGFDCDLFVENSLIDMYSK 297
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 225/419 (53%), Gaps = 25/419 (5%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+HRE + LS+ + +C + I +A++ +N +VG++++ +Y+KC +
Sbjct: 149 MHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNM 208
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
I DA VFE+MP R +V+W+++ A + Q + L L+R + +E +FT ++ILSA
Sbjct: 209 IKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSA 268
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C +G H ++ GF VA SL+ +Y +CG +E+A +F M K++V W
Sbjct: 269 CASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIW 328
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD-SMA 364
N+MIA +++H + A+ LFE+M + + P+ +T+L V+S C H GLVE+G+ YF M+
Sbjct: 329 NAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMS 388
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------------- 408
++P + HYSC+VD+LGR+G +EA + + +MP P A +W
Sbjct: 389 DRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLAR 448
Query: 409 -AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
AAE LEP+ HV L+N+YA W+ RK +KD G K G SWIE V
Sbjct: 449 IAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKV 508
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY-------VPEVHEEKVDDASHKRTEPF 519
+ F ++ + R+++I L+ + +M+ + +VH E+ ++ +E
Sbjct: 509 HVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKL 567
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 1/281 (0%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+R +D S +S + C +++ G LAI G + + + LI LY+KC
Sbjct: 51 DRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDC 110
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VF+ M VR++VSW +IA + + L+L+ M ++FT +S + AC
Sbjct: 111 ARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAA 170
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
A+ + + H +++ S V +++ +Y KC +++A +VF M + +V+W+S+
Sbjct: 171 KYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSL 230
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
AGY Q+GL A+ LF ++ V+ T ++S+C L EG + K G
Sbjct: 231 FAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGF 290
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ +VD+ R G +E+A M + N VIW A
Sbjct: 291 HGNFFVAASLVDVYARCGQIEKAYALFAYME-HKNVVIWNA 330
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 224/417 (53%), Gaps = 51/417 (12%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D + +TSC ++ G + +++GF +N+YVG+S+I + S + DA KVF
Sbjct: 177 DEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVF 236
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM--RNSM-------------------- 231
+M R+V SWT+++ +A+ ++D EL+ MM RN +
Sbjct: 237 NQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALT 296
Query: 232 ----------LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
+ PN+ +LSAC GAL QG H ++G ++ +LI MY
Sbjct: 297 FFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMY 356
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCG ++ A VFN + +D++S+ SMI+G + HGL A+ +F +M+ + V P+ IT L
Sbjct: 357 AKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITIL 416
Query: 342 GVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
GV++ C H GLVEEG +M G+ P+++HY C +DLLGRAG LE A + +K MP+
Sbjct: 417 GVLNGCSHSGLVEEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPM 476
Query: 401 YPNAVIWEA--AESRL----------------LLEPECAATHVQLANLYAGVRCWDQAAR 442
P+ VIW A + SR+ L + V L+NLYA + W++
Sbjct: 477 EPDIVIWRALLSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTE 536
Query: 443 VRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
+RKLM D+ +++PGCSWIE+ +V+ FR D+ + ++ EI L+ ++ ++ +GY
Sbjct: 537 MRKLMVDRRSESSPGCSWIEVNGLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGY 593
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 46/266 (17%)
Query: 168 ANVYVGSSLITLY------SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ----EWQV 217
+N + +SLI Y R++ D Y P + W +I +++ + +
Sbjct: 104 SNASLTASLIHCYLCAKNHPNARILFDHYP----SPSPPIKLWNVMIRTYSKIRNSQEPI 159
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+ L + + + P+++TFT ++++C+ +L G H ++ GF S + V NS+
Sbjct: 160 HLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFESNLYVGNSV 219
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM--------- 328
I+M +E+A VFN M +D+ SW S++ GYA+HG RA +LF M
Sbjct: 220 INMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWA 279
Query: 329 -----------------------MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
RV P+ + V+S+C H G +++G + K
Sbjct: 280 VMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDK 339
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEA 391
G++ + + ++D+ + G ++ A
Sbjct: 340 IGIRQSSNISTALIDMYAKCGRIDCA 365
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 106/226 (46%), Gaps = 17/226 (7%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
+R+ + + L +++C + G + G + + ++LI +Y+KC I
Sbjct: 305 DRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDC 364
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF + R+V+S+T++I+ + L ++ M + + PN+ T +L+ C+
Sbjct: 365 ASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSH 424
Query: 249 SGALGQGRS--AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSW 305
SG + +G S A+ +++ G I+ I + + G +E A+ V M + DIV W
Sbjct: 425 SGLVEEGSSILANMESL-WGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIW 483
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
++++ H ++L E++ I+ +G + S H G
Sbjct: 484 RALLSASRIH----HNVNLGEQI---------ISHIGQLKSSDHNG 516
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 9/171 (5%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN TF+ +L+ L Q H Q + S + SLI Y N A +
Sbjct: 72 PNPQTFSLLLNQRPKLSPLQQ---IHAQVVTQALSSNASLTASLIHCYLCAKNHPNARIL 128
Query: 294 FNNMHGKD--IVSWNSMIAGYAQHGLAVRAIDLFEEMM----KQRVKPDAITFLGVISSC 347
F++ I WN MI Y++ + I LF M+ +V PD TF VI+SC
Sbjct: 129 FDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSC 188
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
H + G++ + K G + L + V+++ +E+AR QM
Sbjct: 189 SHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQM 239
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 233/428 (54%), Gaps = 55/428 (12%)
Query: 138 LSTAVTSCG---STRNIRGGAPYQCLAIRTGFIAN-VYVGSSLITLYSKC---------- 183
L T +++C S +I GA A + GF N V VG++LI +Y+KC
Sbjct: 90 LITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVF 149
Query: 184 -----------RVIIDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
+ID Y K+F+++PV+NVVSWT +I F ++ + LE
Sbjct: 150 DQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALE 209
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
+R M+ + + P+ T +I+SAC GALG G H ++ F ++V NSLI MY
Sbjct: 210 CFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYA 269
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
+CG +E A VF+ M +++VSWNS+I G+A +GLA +A+ F M K+ ++P+ +++
Sbjct: 270 RCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTS 329
Query: 343 VISSCRHGGLVEEG-KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
+++C H GL++EG K++ D H P ++HY C+VDL RAG L+EA D IK+MP+
Sbjct: 330 ALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMM 389
Query: 402 PNAVIW-------------EAAES----RLLLEPECAATHVQLANLYAGVRCWDQAARVR 444
PN V+ E AE ++ L P + +V +N+YA V WD A++VR
Sbjct: 390 PNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVR 449
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV- 503
+ MK++GL+ N S IEI + +++F + DK + I L+ L ++ GYVP+
Sbjct: 450 REMKERGLQKNLAFSSIEIDSGIHKFVSGDKYHEENDYIYSALELLSFELHLYGYVPDFS 509
Query: 504 -HEEKVDD 510
E VDD
Sbjct: 510 GKESDVDD 517
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 36/243 (14%)
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA---LGQGRSA 258
VSWT+ I+ + + M + +EPN T ++LSAC S + + G +
Sbjct: 53 VSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAAL 112
Query: 259 HCQTIRMGF-FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG- 316
H + GF + + V +LI MY KCG ++ A VF+ M +++VSWN+MI GY ++G
Sbjct: 113 HTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGD 172
Query: 317 ----------LAVR--------------------AIDLFEEMMKQRVKPDAITFLGVISS 346
L V+ A++ F EM V PD +T + +IS+
Sbjct: 173 VDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISA 232
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
C + G + G + K + + + ++D+ R G +E AR M N V
Sbjct: 233 CANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMS-QRNLVS 291
Query: 407 WEA 409
W +
Sbjct: 292 WNS 294
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 226/400 (56%), Gaps = 19/400 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK + +L ++ D+ L+T + C +N+ G L I+ G+ ++ +G++L
Sbjct: 190 EKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTAL 249
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPN 235
I LY+KC+ A VF + R+ S+ AI+ F + + + + +R + ++P+
Sbjct: 250 IDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPD 309
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+F+ +LS +L +GR H +I+ GF +I V+N+LI+MY KCG VE+A FN
Sbjct: 310 SVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFN 369
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+M D +SWN++I+ Y+ HG +A+ L++EM ++ PD IT L ++ +C + GL E+
Sbjct: 370 SMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACTYSGLSED 429
Query: 356 GKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------ 408
G F++M +K+G++P L+HY+C+VDLLGRAG L +A D I + P + ++W
Sbjct: 430 GLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSESTLLWRTLVNVC 489
Query: 409 -----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
A++ L L P+ A ++V ++N+YAG D+A++VR MKD L G
Sbjct: 490 KLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKVRTTMKDLKLSKEAG 549
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
SW+EI N+V+ F A + EI LD L ++M+ +
Sbjct: 550 SSWVEIDNMVHYFVASGTDHPESIEIYARLDLLRNEMRGI 589
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 131/251 (52%), Gaps = 4/251 (1%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ +C ++ G I++GF NV+VG+SLI++YS+ +A KVF + +++
Sbjct: 17 LQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKDL 76
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
+I + + + ++ + + L+PND+TFT+I+S C + +G+ H
Sbjct: 77 RCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCN----VEEGKQLHGL 132
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++ G V N++I+MY K G VEEA +F+ M+ K+++SW ++I+GY ++G +A
Sbjct: 133 AVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGEKA 192
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+D F E+ V+ D+ ++ C ++ G + K G +++ + ++DL
Sbjct: 193 VDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALIDL 252
Query: 382 LGRAGLLEEAR 392
+ + AR
Sbjct: 253 YAKCKNFQSAR 263
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 130/264 (49%), Gaps = 2/264 (0%)
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
ST N+ G LA++ G + VG+++IT+Y K ++ +A ++F M +N++SWTA
Sbjct: 119 STCNVEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTA 178
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
+I+ + + + ++ + +R +E + +IL C+ L G H I++G
Sbjct: 179 LISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLG 238
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFE 326
+ I + +LI +Y KC N + A VFN + + S+N+++ G+ ++ +F
Sbjct: 239 YPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFL 298
Query: 327 EMMK-QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
++ +KPD+++F ++S + + +G+ K G + + ++ + +
Sbjct: 299 SQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKC 358
Query: 386 GLLEEARDFIKQMPIYPNAVIWEA 409
G++E+A M + + W A
Sbjct: 359 GIVEDAYQAFNSMSA-NDCISWNA 381
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N+ T IL AC+ G + G H I+ GF + V SLISMY + GN +EA VF
Sbjct: 9 NEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVF 68
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
N + KD+ N MI Y + G RAI +F ++ + P+ TF +IS+C VE
Sbjct: 69 NGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCN----VE 124
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
EGK K+G+ + + V+ + G+ G++EEA M N + W A
Sbjct: 125 EGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMN-KKNLISWTA 178
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/351 (37%), Positives = 195/351 (55%), Gaps = 19/351 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSML 232
++++ Y+ ++ ++FEEMP RNV SW A+I + + L + RM+ + +
Sbjct: 183 NTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTV 242
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
PND T ++LSAC GAL G+ H G+ + V N+L+ MY KCG VE A+
Sbjct: 243 VPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALD 302
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
VF +M KD++SWN++I G A HG A++LF M PD ITF+G++ +C H GL
Sbjct: 303 VFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGL 362
Query: 353 VEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE--- 408
VE+G YF SM + + P ++HY C+VDLLGRAGLL A DFI++MPI +AVIW
Sbjct: 363 VEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALL 422
Query: 409 --------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
A E + EP+ A +V L+N+Y W AR++ M+D G K
Sbjct: 423 GACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKK 482
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
PGCS IE+ + + F + D+ + +I L L +++ GYVP + E
Sbjct: 483 LPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRSSGYVPGLME 533
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 13/260 (5%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC ++ G C I++GF AN +V ++LI +Y+ I AY+VF EM RNV
Sbjct: 58 LKSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNV 117
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP--NDFTFTSILSACTGSGALGQGRSAH 259
++WTA+I + C +L R L P + + +++S + + + R
Sbjct: 118 IAWTAMINGYIT------CCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELF 171
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
+ S+ N++++ Y G+V +F M +++ SWN++I GY ++G
Sbjct: 172 DKMPNKDVMSW----NTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFS 227
Query: 320 RAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+ F+ M+ V P+ T + V+S+C G ++ GK HG K + + +
Sbjct: 228 EVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNAL 287
Query: 379 VDLLGRAGLLEEARDFIKQM 398
+D+ + G++E A D K M
Sbjct: 288 MDMYAKCGVVETALDVFKSM 307
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
+A+KVF+++P N W A+ ++Q + L+R M+ + PN FTF IL +C
Sbjct: 3 NAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCV 62
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
AL +G HC I+ GF + VA +LI MY G + A VF M +++++W +
Sbjct: 63 KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI GY V A LF ++ +R D + + +IS V + FD M
Sbjct: 123 MINGYITCCDLVTARRLF-DLAPER---DIVLWNTMISGYIEAKDVIRARELFDKMPNKD 178
Query: 368 L---KPELDHYSCVVDLLGRAGLLEE 390
+ L+ Y+ D++ L EE
Sbjct: 179 VMSWNTVLNGYASNGDVMACERLFEE 204
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
+E A VF+ + + WN+M GY+Q+ I LF +M V P+ TF ++ S
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 347 CRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
C ++EG+ + K G + + ++D+ G + A +M I N +
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEM-IERNVIA 119
Query: 407 WEA 409
W A
Sbjct: 120 WTA 122
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 227/410 (55%), Gaps = 30/410 (7%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++A++ C + + G L + G+ +N+ V +SL+ LY KC I++A ++F+ M
Sbjct: 282 LTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMN 341
Query: 198 VRNVVSWTAIIAAFAQEWQVDM-----------CLELYRMMRNSMLEPNDFTFTSILSAC 246
N+V+W A+IA AQ ++ L L+ + S ++P+ FTF+S+LS C
Sbjct: 342 DVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVC 401
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ AL QG H +TI+ GF S + V +S+I+MY KCG++E A VF M + ++ W
Sbjct: 402 SKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWT 461
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK- 365
+MI G+AQHG + +A++LFE+M ++P+ +TF+GV+S+C G+V E YF+ M K
Sbjct: 462 TMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKE 521
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------E 408
+ +KP +DHY C+VD+L R G ++EA D IK+M + IW +
Sbjct: 522 YKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCD 581
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AAE L L+P+ T+ L N Y +D +RV +M+++ + SWI I + VY
Sbjct: 582 AAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMREEKIGELKDWSWISIKDRVY 641
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRTEP 518
F+ DK++ S I L+ L + K LGY + EK D K + P
Sbjct: 642 SFQTNDKADIE-SSIGKSLEDLHIKAKNLGYEMLEYVEKSDKEKEKTSSP 690
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 146/284 (51%), Gaps = 15/284 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID-AYKVFEEM 196
L+ A+ +C S +++ G I+ + +G++L +LY+KC ++ F +
Sbjct: 178 LAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRI 237
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELY--RMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
++V+SWTA I+A ++ + + ++ ++ ++PN++T TS LS C L
Sbjct: 238 KEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLEL 297
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G H ++G+ S ++V NSL+ +Y KCG + EA +F M+ ++V+WN+MIAG+AQ
Sbjct: 298 GIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQ 357
Query: 315 -----------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
+ + A++LF ++ + +KPD TF V+S C +E+G+
Sbjct: 358 MMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHART 417
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K G ++ S ++++ + G +E A +M I ++W
Sbjct: 418 IKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSI-RTMILW 460
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 5/282 (1%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
+VD+SF + C + C ++TG + ++ S L+T+Y+KC + A +
Sbjct: 70 EVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQ 129
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSG 250
VF+ M RN V+WT ++ + Q + L+ M+ +S P+++T L+ACT
Sbjct: 130 VFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLH 189
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN-VEEAVYVFNNMHGKDIVSWNSMI 309
+L G H I+ + N+L S+Y KCG +E + F + KD++SW + I
Sbjct: 190 SLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAI 249
Query: 310 AGYAQHGLAVRAIDLFEEMM--KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
+ + G A++ + +F EM+ + +V+P+ T +S C +E G K G
Sbjct: 250 SACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLG 309
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ L + ++ L + G + EA+ K M N V W A
Sbjct: 310 YESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDV-NLVTWNA 350
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+++ L+R +K D S+ ++ C + G I+TGF+++V VGSS+I +
Sbjct: 376 LNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINM 435
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I A KVF EM +R ++ WT +I FAQ L L+ M+ + PN TF
Sbjct: 436 YNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTF 495
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS-------------LISMYCKCGN 286
+LSAC +G + + F+Y ++ L+ M + G
Sbjct: 496 VGVLSACGSAGMVNEA------------FNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQ 543
Query: 287 VEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
V+EA + M K W+++I G G D E+++ + K
Sbjct: 544 VQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPK 592
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
E + + + S E + + +L C + + + HC ++ G +++ L+++Y
Sbjct: 59 EAFSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVY 118
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQRVKPDAITF 340
KCG +E A VF++M+ ++ V+W +++ GY Q+ + AI LFEEM + P T
Sbjct: 119 AKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTL 178
Query: 341 LGVISSC 347
+++C
Sbjct: 179 AIALNAC 185
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 241/462 (52%), Gaps = 36/462 (7%)
Query: 80 SKHLDSQKFNHDFTGTNSTF---GSSNVFDQLLDTPVVDVEKLISMHHD----------- 125
S H D + TG S + +FD++ VV +IS + D
Sbjct: 164 SSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLF 223
Query: 126 --LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC 183
+ + +K D S + T V++C + +I+ G G +N+ + ++LI LYSKC
Sbjct: 224 KEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKC 283
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ A +F+ + ++V+SW +I + L L++ M S PND T SIL
Sbjct: 284 GEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSIL 343
Query: 244 SACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
AC GA+ GR H + G + + SLI MY KCG++E A VFN+MH +
Sbjct: 344 PACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRT 403
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+ + N+MI G+A HG A A D+F M K ++PD ITF+G++S+C H G+++ G+ F
Sbjct: 404 LSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFR 463
Query: 362 SMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW------------- 407
SM + + + P+L+HY C++DLLG GL +EA + I M + P+ VIW
Sbjct: 464 SMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNV 523
Query: 408 ----EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEI 463
A+ + +EPE ++V L+N+YA W++ A +R L+ DKG+K PGCS IEI
Sbjct: 524 ELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEI 583
Query: 464 MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHE 505
+VV+ F DK + R EI +L+ + ++ G+VP+ E
Sbjct: 584 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSE 625
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 142/291 (48%), Gaps = 35/291 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC + + G ++ G+ ++YV +SLI++Y K DA+KVF+ R+V
Sbjct: 110 LKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDV 169
Query: 202 VSWTAIIAAFAQEWQVDM-------------------------------CLELYRMMRNS 230
VS+TA+I +A ++ L+L++ M +
Sbjct: 170 VSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKT 229
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
++P++ T +++SAC SG++ GR H G S +++ N+LI +Y KCG VE A
Sbjct: 230 NVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETA 289
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F + KD++SWN+MI GY L A+ LF+EM++ P+ +T L ++ +C
Sbjct: 290 CGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQL 349
Query: 351 GLVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G ++ G+ VY D K G+ + ++D+ + G +E A M
Sbjct: 350 GAIDFGRWIHVYIDKRIK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 31/234 (13%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A VFE + N++ W + A ++LY M + L PN +TF +L +C
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN---------------------- 286
+G+ H +++G+ + V SLISMY K G
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175
Query: 287 ---------VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+E A +F+ + KD+VSWN++I+GYA G A+DLF+EMMK VKPD
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
T + V+S+C G ++ G+ + HGL L + ++DL + G +E A
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETA 289
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 213/364 (58%), Gaps = 20/364 (5%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
L ++ GF +N+YV ++LI Y + + K+F+EMP R+++SW+++I+ FA+
Sbjct: 116 HTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLP 175
Query: 218 DMCLELYRMM--RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
D L L++ M + S + P+ S++SA + GAL G H R+G + + +
Sbjct: 176 DEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGS 235
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
+LI MY +CG+++ +V VF+ M +++V+W ++I G A HG A++ F +M++ +KP
Sbjct: 236 ALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKP 295
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
D I F+GV+ +C HGGLVEEG+ F SM +++G++P L+HY C+VDLLGRAG++ EA DF
Sbjct: 296 DRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDF 355
Query: 395 IKQMPIYPNAVIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCW 437
++ M + PN+VIW E A+ R+ L+P +V L+N Y GV W
Sbjct: 356 VEGMRVRPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNW 415
Query: 438 DQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
+ VR M++ + PG S + I V + F + D S+ + EI L ++D +K
Sbjct: 416 VKKEGVRNSMRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTVKLG 475
Query: 498 GYVP 501
GY P
Sbjct: 476 GYTP 479
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+ L L+ M + + + FTF IL + + H +++GF S I V N+LI
Sbjct: 81 LALALFSHMHRTNVPFDHFTFPLILKSSKLNP-----HCIHTLVLKLGFHSNIYVQNALI 135
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM--KQRVKPD 336
+ Y G++ ++ +F+ M +D++SW+S+I+ +A+ GL A+ LF++M + + PD
Sbjct: 136 NSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTLFQQMQLKESDILPD 195
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+ L VIS+ G +E G +++ G+ + S ++D+ R G ++ +
Sbjct: 196 GVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMYSRCGDIDRSVKVFD 255
Query: 397 QMPIYPNAVIWEA 409
+MP + N V W A
Sbjct: 256 EMP-HRNVVTWTA 267
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/347 (37%), Positives = 201/347 (57%), Gaps = 18/347 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S+I Y+K + A +F +M +N +SWT +I+ + Q L+L+ M+NS +E
Sbjct: 214 NSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVE 273
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P++ + + LSAC GAL QG+ H + + LI MY KCG++ EA+ V
Sbjct: 274 PDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEV 333
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F N+ K + +W ++I+GYA HG AI F EM K +KP+ ITF V+++C + GLV
Sbjct: 334 FKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLV 393
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----- 407
EEGK+ F +M + + LKP ++HY CVVDLL RAGLL+EA+ FI++MP+ PNAVIW
Sbjct: 394 EEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLK 453
Query: 408 ------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
E E + ++P +V AN++A + WD+AA R+LMK++G+
Sbjct: 454 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKV 513
Query: 456 PGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PGCS I + + F A D+S+ + +I + +++ GYVPE
Sbjct: 514 PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWKIMRRKLEENGYVPE 560
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRV-------IIDAYKVFEEMPVRNVVSWTAIIAAFAQE 214
++TG I + Y IT + C + + A VF+ + W +I F+
Sbjct: 67 LKTGLIQDSYA----ITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCS 122
Query: 215 WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
+ + L LY+ M N +TF S+L AC+ AL + H Q ++G+ + +
Sbjct: 123 DEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAV 182
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA--------------------- 313
NSLI+ Y GN + A +F+ + D VSWNS+I GYA
Sbjct: 183 NSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAI 242
Query: 314 ----------QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
Q G+ A+ LF EM V+PD ++ +S+C G +E+GK +
Sbjct: 243 SWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL 302
Query: 364 AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
K ++ + ++D+ + G + EA + K +
Sbjct: 303 TKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNI 337
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A VF+ D WN MI G++ R++ L++ M+ +A TF ++ +C +
Sbjct: 97 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSN 156
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+EE + K G + ++ + +++ G + A ++P P+AV W +
Sbjct: 157 LSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIP-KPDAVSWNS 215
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 206/359 (57%), Gaps = 18/359 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV + +++ +KC +I +A ++F EM +N +SW+A+I + + LE++ +M+
Sbjct: 226 NVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQ 285
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ P F +S+L+AC GAL QGR H + +L+ MY KCG ++
Sbjct: 286 REEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLD 345
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
A VF M K++ +WN+MI G HG A AI+LF +M KQ+ +P+ IT LGV+S+C
Sbjct: 346 MAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACA 405
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H G+V+EG F+SM + +G++P ++HY CVVDLLGRAGLL EA + + MP+ P+A +W
Sbjct: 406 HSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVW 465
Query: 408 EA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
A + L LEP+ + + L+N+YA WD A VRKLMK++
Sbjct: 466 GALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKER 525
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
G+KT+ G S I+ VV+ F+ D S+ ++ I +L ++ ++K G+ P + D
Sbjct: 526 GVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFD 584
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 37/268 (13%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRV--IIDAYKVFEEMPVRNVVSWTAIIAAFAQEW 215
+A+RTG + YV +L+ Y+ + A KVFE +P NV + II Q
Sbjct: 50 HAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNN 109
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF-------- 267
+ + Y M + PN FT+ ++ ACT + A +G H I+ G
Sbjct: 110 EPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRS 169
Query: 268 --------FSYIQVA---------------NSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
F ++ A N++I Y KCG VE A +F +M K++ S
Sbjct: 170 AGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGS 229
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
WN M++G A+ G+ A +LF EM ++ + I++ +I GG +E F+ M
Sbjct: 230 WNVMVSGMAKCGMIEEARELFNEMKEK----NEISWSAMIDGYIKGGYYKEALEVFNVMQ 285
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ ++P S V+ G L++ R
Sbjct: 286 REEIRPRKFVLSSVLAACANLGALDQGR 313
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 225/391 (57%), Gaps = 29/391 (7%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++A++ C +++ G L I+ GF +N+ + +S++ LY KC I +A K+F+EM
Sbjct: 274 LTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEME 333
Query: 198 VRNVVSWTAIIAAFAQ-------EWQVDMC----LELYRMMRNSMLEPNDFTFTSILSAC 246
++V+W A+IA A+ + C L ++ + S ++P+ FTF+S+LS C
Sbjct: 334 TISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVC 393
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ AL QG H QTI+ GF S + V +L++MY KCG++E A F M + ++SW
Sbjct: 394 SSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWT 453
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-K 365
SMI GYAQ+G +A+ LFE+M V+P+ ITF+GV+S+C H G+V+E YF M +
Sbjct: 454 SMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNE 513
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----------------- 408
+ + P +DHY+C++D+ R G L+EA DFIK+M + PN IW
Sbjct: 514 YKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFY 573
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AAE L L+P+ T+ L N+Y W + +RVRK+MK++ L SWI I + +Y
Sbjct: 574 AAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIY 633
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
F+ +S+ + E+ +L L ++ K+ GY
Sbjct: 634 SFKRNARSHAQSGEMYELLGNLHEKAKSFGY 664
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 163/331 (49%), Gaps = 26/331 (7%)
Query: 94 GTNSTFGSSNVFDQLLDTPVVDVEKLISMH-HD--------LHRERLKVDAS----FLST 140
GT T + VFD+L VV L++ + HD + RE L+ A L T
Sbjct: 118 GTMET--ARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGT 175
Query: 141 AVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRN 200
A+++ + G +I+ + +G+SL +LYSKC + A K F + +N
Sbjct: 176 ALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKN 235
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V+SWT +I+A+ + L+ + M + +EPN+FT TS LS C +L G H
Sbjct: 236 VISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHS 295
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ------ 314
TI++GF S + + NS++ +Y KCG + EA +F+ M +V+WN+MIAG+A+
Sbjct: 296 LTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAK 355
Query: 315 -----HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
H A+ +F ++ + +KPD TF V+S C +E+G+ K G
Sbjct: 356 DDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFL 415
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
++ + +V++ + G +E A +M I
Sbjct: 416 SDVVVGTALVNMYNKCGSIERASKAFVEMSI 446
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 141/282 (50%), Gaps = 1/282 (0%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
RE KV+++F + C + + ++TG + ++ + L+ +Y+KC +
Sbjct: 62 REGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTME 121
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
A KVF+E+P RNVVSWT ++ + + + ++ ++++R M + P ++T + LSA +
Sbjct: 122 TARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASS 181
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
+ G+ H +I+ + NSL S+Y KCG++E AV F + K+++SW +
Sbjct: 182 DLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTT 241
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
+I+ + +G A + F EM+ + V+P+ T +S C ++ G K G
Sbjct: 242 VISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLG 301
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ L + ++ L + G + EA+ +M + V W A
Sbjct: 302 FESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETI-SLVTWNA 342
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 240/446 (53%), Gaps = 63/446 (14%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIR-TGFIANVYVGS 174
+ + +S + + + R+ + S ++C + R+ GA + GF +++YV +
Sbjct: 90 LSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYVNN 149
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF----------------------- 211
++I +Y KC + A VF+EMP R+V+SWT +I A+
Sbjct: 150 AVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVT 209
Query: 212 --------AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
AQ LE++R +R+ +E ++ T ++SAC GA S + I
Sbjct: 210 WTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGA-----SKYANWI 264
Query: 264 R-------MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
R G + V ++LI MY KCGNVEEA VF M +++ S++SMI G+A HG
Sbjct: 265 RDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHG 324
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHY 375
A AI LF +M++ VKP+ +TF+GV+++C H GLV++G+ F SM K +G+ P + Y
Sbjct: 325 RARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELY 384
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEP 418
+C+ DLL RAG LE+A ++ MP+ + +W E A RL LEP
Sbjct: 385 ACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFELEP 444
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN-VVYRFRAEDKSN 477
+ ++ L+N YA WD ++VRKL+++K LK NPG SW+E N ++++F A D S+
Sbjct: 445 DNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGDVSH 504
Query: 478 TRLSEILPVLDFLVDQMKTLGYVPEV 503
+++EI L+ L++++K +GY P +
Sbjct: 505 PKINEIKKELNDLLERLKGIGYQPNL 530
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 34/241 (14%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F ++ N +WTA+I A+A + L Y MR + P FTF+++ SAC
Sbjct: 65 LFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRH 124
Query: 252 LGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS------ 304
G H QT+ +G FS + V N++I MY KCG++ A VF+ M +D++S
Sbjct: 125 SALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIV 184
Query: 305 -------------------------WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
W +M+ GYAQ+ + + A+++F + + V+ D +T
Sbjct: 185 AYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVT 244
Query: 340 FLGVISSCRHGGLVEEGKVYFD--SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQ 397
+GVIS+C G + D + G+ + S ++D+ + G +EEA D K
Sbjct: 245 LVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKG 304
Query: 398 M 398
M
Sbjct: 305 M 305
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 225/393 (57%), Gaps = 29/393 (7%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L++ ++ CG+ ++ G Q + G AN+ V +S + LY + +A ++FEEM
Sbjct: 282 LTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMD 341
Query: 198 VRNVVSWTAIIAAFAQ---EWQVDM--------CLELYRMMRNSMLEPNDFTFTSILSAC 246
++++W A+I+ +AQ + D+ L+L+R + S L+P+ FTF+SILS C
Sbjct: 342 SSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVC 401
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
+ AL QG H TI+ G S + V ++L++MY KCG++E A F M + V+W
Sbjct: 402 SAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWT 461
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AK 365
SMI+GY+QHG + AI LFE+M+ +P+ ITF+ ++S+C + GLVEE + YFD M +
Sbjct: 462 SMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNE 521
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----------------- 408
+ ++P +DHY C+VD+ R G L++A FIK+ PN IW
Sbjct: 522 YHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFY 581
Query: 409 AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVY 468
AA+ L L+P+ T+V L N+Y W ARVRKL K + + SWI I + VY
Sbjct: 582 AADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVY 641
Query: 469 RFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
FRA+D ++ + +E+ +L+ L+++ K +GY P
Sbjct: 642 FFRADDMTHPQATELYQLLENLLEKAKAVGYEP 674
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 13/282 (4%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L +++C + R I G +I+ G +G+SL LY K + + F+ P
Sbjct: 180 LGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTP 239
Query: 198 VRNVVSWTAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
+NV++WT +I++ A+ E +D+ L L+ M + PN+FT TS++S C + G+
Sbjct: 240 DKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGK 299
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ-- 314
++G + + V NS + +Y + G +EA+ +F M I++WN+MI+GYAQ
Sbjct: 300 QVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIM 359
Query: 315 ---------HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+A+ LF ++++ +KPD TF ++S C +E+G+ + K
Sbjct: 360 DSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIK 419
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G ++ S +V++ + G +E A +MP V W
Sbjct: 420 TGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTR-TPVTW 460
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
++TG A+++V +SL+ +Y +C DA ++F+ MP +NVV+WTA+I + + L
Sbjct: 103 VKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALAL 162
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
E++ M P+ +T +LSAC+ + + G+ H +I+ G + + NSL +Y
Sbjct: 163 EVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLY 222
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ-HGLAVRAIDLFEEMMKQRVKPDAITF 340
CK G++E + F K++++W +MI+ A+ + LF +M++ V P+ T
Sbjct: 223 CKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTL 282
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
V+S C + GK K G + L + + L R G +EA ++M
Sbjct: 283 TSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMD- 341
Query: 401 YPNAVIWEA 409
+ + W A
Sbjct: 342 SSSIITWNA 350
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 126/256 (49%), Gaps = 13/256 (5%)
Query: 105 FDQLLDTPVVDVE------KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQ 158
+ Q++D+ D+ + + + DL R LK D S+ ++ C + + G
Sbjct: 355 YAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIH 414
Query: 159 CLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
I+TG +++V V S+L+ +Y+KC I A K F EMP R V+WT++I+ ++Q +
Sbjct: 415 ANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQ 474
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF--SYIQVANS 276
++L+ M S PN+ TF S+LSAC+ +G + + + +R + +
Sbjct: 475 DAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAER-YFDMMRNEYHIEPLVDHYGC 533
Query: 277 LISMYCKCGNVEEAV-YVFNNMHGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQR 332
++ M+ + G +++A ++ + W+S++AG HG LA A D E+ +
Sbjct: 534 MVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKV 593
Query: 333 VKPDAITFLGVISSCR 348
++ + IS+ R
Sbjct: 594 IETYVLLLNMYISTGR 609
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 1/169 (0%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+ +L C +G LG R+ H ++ G + + VA SL+++Y +C + +A +F+ M
Sbjct: 79 YVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMP 138
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
K++V+W ++I G+ + A+++F EM++ P T G++S+C ++ G+
Sbjct: 139 DKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQ 198
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K+G + + L ++G LE K P N + W
Sbjct: 199 VHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPD-KNVITW 246
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 229/411 (55%), Gaps = 21/411 (5%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGF-IANVYV 172
+++E+ +++ D+ E + ++ + +C + + G L ++ G + + ++
Sbjct: 608 INLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFL 667
Query: 173 GSSLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
G SL+ +Y DA +F E ++ V WTA+I+ +Q + L+LY+ MR+
Sbjct: 668 GVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCN 727
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+ TF S L AC ++ G H GF S +++L+ MY KCG+V+ ++
Sbjct: 728 VLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSM 787
Query: 292 YVFNNM-HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF M KD++SWNSMI G+A++G A A+ +F+EM + V PD +TFLGV+++C H
Sbjct: 788 QVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHS 847
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-- 407
G V EG++ FD M +G++P DH +C+VDLLGR G L+EA +FI ++ P+A +W
Sbjct: 848 GRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWAT 907
Query: 408 ---------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
+AAE + LEP+ ++ +V L+N+YA WD+ +R+ M++KG+
Sbjct: 908 MLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGV 967
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
K PGCSWI + F A DKS+ SEI +L L M+ YV ++
Sbjct: 968 KKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAILKDLTPLMRENDYVVQL 1018
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 17/331 (5%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMH-------------HDLHRERLKVDASFLSTAVTSCGS 147
+S++F ++ + VV +IS H ++ + +K S L + +++ S
Sbjct: 280 ASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIAS 339
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+ G A++ G +NVYVGSSL+++Y+KC + A KVF+ + +NVV W A+
Sbjct: 340 LAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAM 399
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
+ + Q + +EL+ M++ P+DFT++SILSAC L G H I+ F
Sbjct: 400 LGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKF 459
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
S + V N+L+ MY K G +E+A F + +D VSWN +I GY Q V A LF
Sbjct: 460 ASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRR 519
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGL 387
M + PD ++ ++S+C +E+GK K G + +L S ++D+ + G
Sbjct: 520 MNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGA 579
Query: 388 LEEARDFIKQMP----IYPNAVIWEAAESRL 414
++ A + MP + NA+I A+ L
Sbjct: 580 IDSAHKILACMPERSVVSMNALIAGYAQINL 610
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 150/292 (51%), Gaps = 7/292 (2%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S+ +++C + + G + I+ F +N++VG++L+ +Y+K + DA + FE +
Sbjct: 432 SSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRN 491
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
R+ VSW II + QE L+R M + P++ + SILSAC L QG+
Sbjct: 492 RDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQV 551
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
HC +++ G + + +SLI MY KCG ++ A + M + +VS N++IAGYAQ L
Sbjct: 552 HCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE 611
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+A++LF +M+ + + ITF ++ +C + G+ + K GL +LD
Sbjct: 612 -QAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGL--QLDDEFLG 668
Query: 379 VDLLG---RAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQL 427
V LLG + +A + +AV+W A S L + +C+ +QL
Sbjct: 669 VSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISG-LSQNDCSVVALQL 719
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 7/280 (2%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D L++ +++C S R + G CL+++TG +Y GSSLI +Y+KC I A+K+
Sbjct: 528 DEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKIL 587
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
MP R+VVS A+IA +AQ ++ + L+R M + + TF S+L AC L
Sbjct: 588 ACMPERSVVSMNALIAGYAQ-INLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLN 646
Query: 254 QGRSAHCQTIRMGFF---SYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMI 309
GR H ++MG ++ V SL+ MY +A +F+ + K V W +MI
Sbjct: 647 LGRQIHSLILKMGLQLDDEFLGV--SLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMI 704
Query: 310 AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+G +Q+ +V A+ L++EM V PD TF+ + +C +++G + G
Sbjct: 705 SGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFD 764
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S +VD+ + G ++ + K+M + + W +
Sbjct: 765 SDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNS 804
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 128/238 (53%), Gaps = 4/238 (1%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
+++ GF + +G+ ++ LY+KC + A + F+++ +++++W +I++ +++ +
Sbjct: 85 SLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLV 144
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
++ + ++ NS + PN+FTF +LS+C + GR HC ++MGF S +LI M
Sbjct: 145 VKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGM 204
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KC + +A +F+ D VSW SMI GY + GL A+ +F+EM K +PD + F
Sbjct: 205 YAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAF 264
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ VI++ G ++ F M + ++ ++ + G EA +F + M
Sbjct: 265 VTVINAYVDLGRLDNASDLFSRMPNRNVVA----WNLMISGHAKGGYGVEAIEFFQNM 318
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%)
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++I Y + +A +F MP RNVV+W +I+ A+ +E ++ MR + ++
Sbjct: 266 TVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKS 325
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
T S+LSA AL G H + ++ G S + V +SL+SMY KCG +E A VF
Sbjct: 326 TRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVF 385
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ ++ +++V WN+M+ GY Q+G A ++LF M PD T+ ++S+C ++
Sbjct: 386 DTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLD 445
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G + K+ L + +VD+ ++G LE+AR
Sbjct: 446 LGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDAR 483
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 49/318 (15%)
Query: 105 FDQLLDTPVVDVEKLISMHHDLHRERLKV-------------DASFLSTAVTSCGSTRNI 151
F QL D ++ ++SMH L V + + ++SC +
Sbjct: 117 FKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMV 176
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
+ G C ++ GF + Y +LI +Y+KC + DA +F+ + VSWT++I +
Sbjct: 177 KCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGY 236
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
+ + +++++ M EP+ F ++++A
Sbjct: 237 IKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINA-------------------------- 270
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
Y G ++ A +F+ M +++V+WN MI+G+A+ G V AI+ F+ M K
Sbjct: 271 ---------YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKA 321
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+K T V+S+ ++ G + K GL + S +V + + G +E A
Sbjct: 322 GIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAA 381
Query: 392 RDFIKQMPIYPNAVIWEA 409
+ + N V+W A
Sbjct: 382 KKVFDTLN-EQNVVLWNA 398
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 70/134 (52%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H Q++++GF+S + N ++ +Y KC +V+ A F + KDI++WNS+++ +++ G
Sbjct: 82 HAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFP 141
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+ F + V P+ TF V+SSC +V+ G+ ++ K G + +
Sbjct: 142 HLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGAL 201
Query: 379 VDLLGRAGLLEEAR 392
+ + + L +AR
Sbjct: 202 IGMYAKCNFLTDAR 215
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/357 (36%), Positives = 216/357 (60%), Gaps = 23/357 (6%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM-L 232
+SLI Y++ + A ++F +MPVRNV+SWTA+I+ +AQ + LE++ + N
Sbjct: 152 NSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGT 211
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
+PN+ + S+L AC+ GAL G+ GFF V+N+++ ++ +CGN+EEA
Sbjct: 212 KPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQ 271
Query: 293 VFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
VF+ + K ++ SWN+MI G A HG + A+ L+++M+ ++++PD +TF+G++ +C HGG
Sbjct: 272 VFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGG 331
Query: 352 LVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-- 408
+V EG+ F+SM +K + P+L+HY C+VDLLGRAG L+EA + I+ MP+ P++VIW
Sbjct: 332 MVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTL 391
Query: 409 ---------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
AAES LEP +V L+N+YA W AR+RK+MK +
Sbjct: 392 LGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHIT 451
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
G S+IE+ + ++ F ED+S+ + EI +L + D +K + VH ++ +D
Sbjct: 452 KRAGYSYIEVGDGIHEFIVEDRSHLKSGEIYALLHKIYDIIKLHKH---VHHDQNED 505
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 32/264 (12%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F+++P +V + I F+ C LY M + PN ++FT + AC
Sbjct: 35 ACTLFDQIPKPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACAS 94
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ G+ H + GF S + +L+ MY K G + A +F+ M +DI +WNS+
Sbjct: 95 LFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSL 154
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRV--------------------------------KPD 336
IAGYA+ G A++LF +M + V KP+
Sbjct: 155 IAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPN 214
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
++ V+ +C G ++ GK +G + V++L R G +EEA+
Sbjct: 215 EVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFD 274
Query: 397 QMPIYPNAVIWEAAESRLLLEPEC 420
++ N W L + C
Sbjct: 275 EIGSKRNLCSWNTMIMGLAVHGRC 298
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 118 KLISMHHDLHRER-LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
K + M L E+ K + +++ + +C + G + A GF N YV +++
Sbjct: 197 KALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAV 256
Query: 177 ITLYSKCRVIIDAYKVFEEM-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
+ L+++C I +A +VF+E+ RN+ SW +I A + L+LY M + P+
Sbjct: 257 LELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPD 316
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA------NSLISMYCKCGNVEE 289
D TF +L ACT G + +GR + S QVA L+ + + G ++E
Sbjct: 317 DVTFVGLLLACTHGGMVAEGRQ-----LFESMESKFQVAPKLEHYGCLVDLLGRAGELQE 371
Query: 290 AVYVFNNM-HGKDIVSWNSMIAGYAQHG 316
A + NM D V W +++ + HG
Sbjct: 372 AYNLIQNMPMAPDSVIWGTLLGACSFHG 399
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
+ Q + H ++R G + LI + ++ A +F+ + + +N I
Sbjct: 1 MNQLKQIHAYSLRNG----LDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQT 56
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
++ G R L+ +M Q P+ +F + +C V G++ K G +
Sbjct: 57 FSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASD 116
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ + ++D+ + G+L AR +MP+
Sbjct: 117 MFAMTALLDMYAKLGMLRSARQLFDEMPV 145
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 206/388 (53%), Gaps = 21/388 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
D +++ + +C N++ G N +V ++L +Y+KC + DA+ VF
Sbjct: 453 DVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVF 512
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGAL 252
M ++V+SW +I + + + L L+ M R S +P+ T IL AC AL
Sbjct: 513 SHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES--KPDGTTVACILPACASLAAL 570
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+GR H +R G+ V N+++ MY KCG + A +F+ + KD+VSW MIAGY
Sbjct: 571 DKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGY 630
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPE 371
HG AI+ F +M ++PD ++F+ ++ +C H GL++EG F+ M K ++P
Sbjct: 631 GMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPN 690
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA-----------------AESRL 414
L+HY+C+VDLL R G L +A FIK MPI P+A IW A AE
Sbjct: 691 LEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIF 750
Query: 415 LLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
LEPE +V LAN+YA W++ ++RK + +GLK NPGCSWIEI + F A D
Sbjct: 751 ELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGD 810
Query: 475 KSNTRLSEILPVLDFLVDQMKTLGYVPE 502
S + +I +L L +MK GY P+
Sbjct: 811 CSKPQAKKIELLLKRLRSKMKEEGYSPK 838
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 151/309 (48%), Gaps = 19/309 (6%)
Query: 91 DFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
+++G+ + S N+F Q+L+ + K ++ S+ + +
Sbjct: 225 EYSGSGNYGESINLFKQMLELGI------------------KPNSYTFSSILKCFAAVAR 266
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G L + GF + V +SLI+ Y R + A K+F+E+ R+V+SW ++I+
Sbjct: 267 VEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISG 326
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ + D +E++ M ++ + T ++ AC G L G+ H +I+
Sbjct: 327 YVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDR 386
Query: 271 -IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
++ N+L+ MY KCG++ A+ VF M K +VSW SMI GY + GL+ AI LF+EM
Sbjct: 387 EVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMK 446
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLE 389
+ V PD ++++C G ++ GK+ D + ++ L+ + + D+ + G ++
Sbjct: 447 SRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMK 506
Query: 390 EARDFIKQM 398
+A D M
Sbjct: 507 DAHDVFSHM 515
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C ++IR G + + +G + + +G L+ +Y KC + + VF+++ + W
Sbjct: 160 CAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLW 219
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+I+ ++ + L++ M ++PN +TF+SIL + +GR H +
Sbjct: 220 NLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICK 279
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
+GF SY V NSLIS Y V A +F+ + +D++SWNSMI+GY ++GL R I++
Sbjct: 280 LGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEI 339
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD-SMAKHGLKPELDHYSCVVDLLG 383
F +M+ V D T + V +C + G + GKV S+ L E+ + ++D+
Sbjct: 340 FIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYS 399
Query: 384 RAGLLEEARDFIKQM 398
+ G L A ++M
Sbjct: 400 KCGDLNSAIRVFERM 414
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 221/382 (57%), Gaps = 21/382 (5%)
Query: 140 TAVTSCGSTRNIRG-GAPYQCLAIRTGFIANVYVGSSLITLY--SKCRVIIDAYKVFEEM 196
T+V S + +G G L I+ G V + +SLI +Y S + + +A +FE +
Sbjct: 307 TSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL 366
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
++ VSW +I+ F+Q + L+ + MR+ + + + F+++L +C+ L G+
Sbjct: 367 ENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQ 426
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H ++ GF VA+SLI MY KCG +E+A F+ ++WNS+I GYAQHG
Sbjct: 427 QVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 486
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHY 375
A+DLF M +RVK D ITF+ V+++C H GLVEEG + SM + +G+ P ++HY
Sbjct: 487 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHY 546
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEP 418
+C++DLLGRAG L+EA+ I+ MP P+A++W + A L LEP
Sbjct: 547 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEP 606
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
E T+V L++++ +R W++ A +++LMK++G+K PG SWIE+ N V F AED+S+
Sbjct: 607 EEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHP 666
Query: 479 RLSEILPVLDFLVDQMKTLGYV 500
EI L L+++++ L YV
Sbjct: 667 NCEEIYLRLGELMEEIRRLDYV 688
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 135/241 (56%), Gaps = 3/241 (1%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMC 220
++ G ++ V +++IT YS+C I DA +VF+ + R++V+W +++AA+ Q +
Sbjct: 228 VKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEA 287
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+L+ M+ EP+ +T+TS++SA GQG+S H I+ G + ++NSLI+M
Sbjct: 288 FQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAM 347
Query: 281 YCK--CGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
Y K +++EA+ +F ++ KD VSWNS++ G++Q GL+ A+ FE M Q V D
Sbjct: 348 YLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHY 407
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
F V+ SC ++ G+ + K G +P S ++ + + G++E+AR
Sbjct: 408 AFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDAT 467
Query: 399 P 399
P
Sbjct: 468 P 468
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
+ E + + R VD + + + G + ++ G+ NV+ GS
Sbjct: 80 NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGS 139
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+L+ +Y+KC + DA++VF+ + +RN V+W A+I+ +AQ L M +E
Sbjct: 140 ALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEI 199
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
+D TF +L+ H + ++ G S V N++I+ Y +CG++E+A VF
Sbjct: 200 DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF 259
Query: 295 NN-MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
+ + +D+V+WNSM+A Y + A LF EM +PD T+ VIS+ G
Sbjct: 260 DGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQ 319
Query: 354 EEGKVYFDSMAKHGLK 369
+GK + K GL+
Sbjct: 320 GQGKSLHGLVIKRGLE 335
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 120/235 (51%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
CLAI++G A++Y +++I+ Y+KC I A K+F E R+ VSW +IA F
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+ LE + M+ + ++F SIL G + G+ H ++MG+ + ++L
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
+ MY KC VE+A VF +++ ++ V+WN++I+GYAQ G A L + M + V+ D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
TF +++ L + + KHGL + + ++ G +E+A
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAE 256
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 78/141 (55%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E + ++ + + +D S + SC ++ G L +++GF N +V SSL
Sbjct: 388 EDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSL 447
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKC VI DA K F+ P + ++W ++I +AQ + + L+L+ +M++ ++ +
Sbjct: 448 IFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDH 507
Query: 237 FTFTSILSACTGSGALGQGRS 257
TF ++L+AC+ G + +G S
Sbjct: 508 ITFVAVLTACSHIGLVEEGWS 528
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
AL + HC I+ G + I AN++IS Y KCG + A +F +D VSWN+MIA
Sbjct: 14 ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIA 73
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G+ G A++ + M + D +F ++ G VE G+ M K G +
Sbjct: 74 GFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ S ++D+ + +E+A + K + I N+V W A
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINI-RNSVTWNA 171
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 225/419 (53%), Gaps = 28/419 (6%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L + L SF S + SC + + G + C ++ GF ++ + + L+ Y+K
Sbjct: 22 LRNDVLPSKTSF-SLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGY 80
Query: 186 IIDAYKVFEEMPVRNV--VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL 243
+ +A +F+ M RN V+W +I+A+ Q + + +++ M++ ++P + T S+L
Sbjct: 81 VEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLL 140
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIV 303
SAC GAL G H + + N+LI MYCKCG +E A+ VF+ + K+I
Sbjct: 141 SACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIF 200
Query: 304 SWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM 363
WNS+I G +G AI F M K+ +KPD +TF+G++S C H GL+ G+ YF M
Sbjct: 201 CWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEM 260
Query: 364 -AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW--------------- 407
+GL+P ++HY C+VDLLGRAG L+EA + I+ MP+ PN+++
Sbjct: 261 LGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKL 320
Query: 408 --EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN 465
+ + L L+P +V L+NLYA + WD RKLM +G+ PGCS IE+ N
Sbjct: 321 GEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNN 380
Query: 466 VVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP-------EVHEEKVDDASHKRTE 517
+V+ F A D S+ + ++I LD + ++K G+VP ++ EE+ + A +E
Sbjct: 381 IVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSE 439
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 96/170 (56%), Gaps = 3/170 (1%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+RN +L P+ +F+ IL +C SG G + HCQ ++MGF + + L+ Y K G
Sbjct: 21 MLRNDVL-PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHG 79
Query: 286 NVEEAVYVFNNM--HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
VEEA +F+NM + V+WN+MI+ Y Q G AI +F++M + VKP +T + +
Sbjct: 80 YVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSL 139
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+S+C H G ++ G+ + LK ++ + ++D+ + G LE A D
Sbjct: 140 LSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAID 189
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 241/458 (52%), Gaps = 31/458 (6%)
Query: 83 LDSQKFNHDFTGTNSTFGSSNVFDQLL----DTPVVDVEKLISMH-HDLHRERLKVDASF 137
+D+ F + T ++ F + F LL + P + + + I H L ++F
Sbjct: 117 IDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNF 176
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L SCG + G + G N+ +G Y KC V A ++FE MP
Sbjct: 177 LVQMYASCGLIES--AGLVFDRTPECDGASWNIMIGG-----YLKCGVFKSARRMFEAMP 229
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+VVSW+ +I + QE + L L++ M +EPN+ + LSAC GA+ QG+
Sbjct: 230 DRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQW 289
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
R +++ +LI MY KCG+VE A+ VF+ M K++++W++MI G A +G
Sbjct: 290 IERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQ 349
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYS 376
A++LF +M Q VKP+ +TF+G++++C H LV+EG +F SM +GLKP H+
Sbjct: 350 GKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHC 409
Query: 377 CVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPE 419
C+VDL GRAG+L++A+ IK MP PN+ IW E RLL L+P
Sbjct: 410 CMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPN 469
Query: 420 CAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTR 479
+V L+N+YA WD+ A +R++M+++ + PGCS+I++ + ++ F A D S+ +
Sbjct: 470 HGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQ 529
Query: 480 LSEILPVLDFLVDQMKTLGYVPEVHEEKVD-DASHKRT 516
L I L + ++K GY P+ + +D D K T
Sbjct: 530 LEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKET 567
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC--GNVEEAVYVFNNMHGK 300
LS+C L Q H QTI G FS VA+ ++S G++ A ++F +
Sbjct: 42 LSSCKTLKDLTQ---IHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKP 98
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK-PDAITFLGVISSCRHGGLVEEGKVY 359
DI N++I YA + A+ + EM + V PD TF ++ +C + G+
Sbjct: 99 DIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAI 158
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
+ K G E+ + +V + GL+E A + P
Sbjct: 159 HSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTP 198
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 214/390 (54%), Gaps = 22/390 (5%)
Query: 139 STAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV 198
S A+ C + ++ GG GF+++ + ++L+ LYS C DA KVF+E+P
Sbjct: 117 SFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK 176
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM---LEPNDFTFTSILSACTGSGALGQG 255
R+ VSW + + + + + L L+ M+N + ++P+ T L AC GAL G
Sbjct: 177 RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG 236
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+ H G + ++N+L+SMY +CG++++A VF M +++VSW ++I+G A +
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMN 296
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM--AKHGLKPELD 373
G AI+ F EM+K + P+ T G++S+C H GLV EG ++FD M + +KP L
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-L 416
HY CVVDLLGRA LL++A IK M + P++ IW E S L+ L
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKS 476
+ E A +V L N Y+ V W++ +R LMK+K + T PGCS IE+ V+ F +D S
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVS 476
Query: 477 NTRLSEILPVLDFLVDQMKTLGYVPEVHEE 506
+ R EI +L + Q+K GYV E+ E
Sbjct: 477 HPRKEEIYKMLAEINQQLKIAGYVAEITSE 506
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 127/292 (43%), Gaps = 16/292 (5%)
Query: 134 DASFLSTAVTSCGST--RNIRGGAPYQCLAIRTGFIANVYVGS---SLITLYSKCRVIID 188
D LS V+S G R I L +RT I N V S + L R I
Sbjct: 11 DDHLLSLIVSSTGKLHLRQI------HALLLRTSLIRNSDVFHHFLSRLALSLIPRDINY 64
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACT 247
+ +VF + + +I AF+ L+R + RNS L N + + L C
Sbjct: 65 SCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCI 124
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
SG L G H + GF S + +L+ +Y C N +A VF+ + +D VSWN
Sbjct: 125 KSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNV 184
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQR---VKPDAITFLGVISSCRHGGLVEEGKVYFDSMA 364
+ + Y ++ + LF++M VKPD +T L + +C + G ++ GK D +
Sbjct: 185 LFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFID 244
Query: 365 KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
++GL L+ + +V + R G +++A M N V W A S L +
Sbjct: 245 ENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAM 295
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 203/348 (58%), Gaps = 22/348 (6%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++I+ +S+C ++ A + F+EM R+ +SW+A+I + QE LE++ M+ +
Sbjct: 240 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 299
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P F S+LSAC GAL QGR H R + SL+ MY KCG ++ A V
Sbjct: 300 PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEV 359
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M K++ SWN+MI G A HG A AIDLF +M + P+ ITF+GV+++C HGGLV
Sbjct: 360 FEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLV 416
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--- 409
++G F+SM K +G++P+++HY C+VDLLGRAGLL EA + +P P +W A
Sbjct: 417 QKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLG 476
Query: 410 --------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ L LEP+ + + L+N+YA W++ VRKLMK++G+KT
Sbjct: 477 ACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTT 536
Query: 456 PGCSWIEI-MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PG S I++ V++F D S+ ++ +I +LD + ++++ GY P+
Sbjct: 537 PGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPD 584
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 13/247 (5%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRV-----IIDAYKVFEEMPVRNVVSWTAIIAAFA 212
L +RTG + + Y+ SL+ Y+ + +VF+ + NV W +I
Sbjct: 54 HALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCI 113
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + + LY M + PN +T+ ++L AC+ +G + +G H ++ G
Sbjct: 114 ENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGH 173
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
+ +S I MY G + EA + ++ G+ D V WN+MI GY + G A +LFE M +
Sbjct: 174 ILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDR 233
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ T+ +IS G+VE + +FD M + + E+ +S ++D + G EA
Sbjct: 234 SMIS---TWNAMISGFSRCGMVEVAREFFDEMKE---RDEIS-WSAMIDGYIQEGCFMEA 286
Query: 392 RDFIKQM 398
+ QM
Sbjct: 287 LEIFHQM 293
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 125/282 (44%), Gaps = 39/282 (13%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLI 177
K I +++++ + + + +C + G ++ G + ++ SS I
Sbjct: 120 KAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAI 179
Query: 178 TLYSKCRVIIDAYKVFEEMPVR-NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+Y+ +++A ++ ++ + V W A+I + + +V+ EL+ M +
Sbjct: 180 RMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDR------ 233
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
S I N++IS + +CG VE A F+
Sbjct: 234 --------------------------------SMISTWNAMISGFSRCGMVEVAREFFDE 261
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M +D +SW++MI GY Q G + A+++F +M K++++P V+S+C + G +++G
Sbjct: 262 MKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG 321
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++ ++ + + +VD+ + G ++ A + ++M
Sbjct: 322 RWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKM 363
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + H + +E+++ L + +++C + + G A R + +G+SL+ +
Sbjct: 287 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDM 346
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I A++VFE+M + V SW A+I A + + ++L+ M + PN+ TF
Sbjct: 347 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITF 403
Query: 240 TSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+L+AC G + +G + + G I+ ++ + + G + EA V +++
Sbjct: 404 VGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP 463
Query: 299 GKDIVS-WNSMIAGYAQHG 316
+ + W +++ +HG
Sbjct: 464 TEPTPAVWGALLGACRKHG 482
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG-----NVEEAVYVFNNMH 298
+ CT S L + AH +R G +A SL+ Y + E ++ VF+ +
Sbjct: 41 TQCTTS--LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVR 98
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
++ WN MI ++ +AI L+ EMM +P+ T+ V+ +C G+V EG
Sbjct: 99 KPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQ 158
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ KHGL + S + + G L EAR + +AV W A
Sbjct: 159 VHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNA 209
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 250/486 (51%), Gaps = 47/486 (9%)
Query: 67 VHLRLIQDFLQT-----------DSKHLDSQKFNHDFTGTNS---TFGSSNVFDQLLDTP 112
VH LI ++Q S H D + TG S + +FD++
Sbjct: 140 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 199
Query: 113 VVDVEKLISMHHD---------LHRERLKV----DASFLSTAVTSCGSTRNIRGGAPYQC 159
VV +IS + + L +E +K D S + + V++C + +I G
Sbjct: 200 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 259
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
GF +N+ + ++LI LY KC + A +FE + ++V+SW +I +
Sbjct: 260 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 319
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSL 277
L L++ M S PND T SIL AC GA+ GR H + G + SL
Sbjct: 320 ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSL 379
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
I MY KCG++E A VF+++ + + SWN+MI G+A HG A A D+F M K ++PD
Sbjct: 380 IDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 439
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
ITF+G++S+C H G+++ G+ F SM + + + P+L+HY C++DLLG +GL +EA + I
Sbjct: 440 ITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMIN 499
Query: 397 QMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQ 439
M + P+ VIW A++ + +EP+ ++V L+N+YA W++
Sbjct: 500 TMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNE 559
Query: 440 AARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
A++R L+ DKG+K PGCS IEI +VV+ F DK + R EI +L+ + ++ G+
Sbjct: 560 VAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGF 619
Query: 500 VPEVHE 505
VP+ E
Sbjct: 620 VPDTSE 625
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 146/285 (51%), Gaps = 35/285 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC ++ R G ++ G+ ++YV +SLI++Y + + DA KVF++ R+V
Sbjct: 110 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 169
Query: 202 VSWTAIIAAFAQE--------------------WQVDM-----------CLELYRMMRNS 230
VS+TA+I +A + W + LEL++ M +
Sbjct: 170 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 229
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ P++ T S++SAC S ++ GR H GF S +++ N+LI +Y KCG VE A
Sbjct: 230 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 289
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F + KD++SWN++I GY L A+ LF+EM++ P+ +T L ++ +C H
Sbjct: 290 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 349
Query: 351 GLVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G +E G+ VY + K G+ H + ++D+ + G +E A+
Sbjct: 350 GAIEIGRWIHVYINKRLK-GVANASSHRTSLIDMYAKCGDIEAAQ 393
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 35/280 (12%)
Query: 162 IRTGFIANVYVGSSLI---TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
I+TG Y S LI L + A VFE + N++ W + A
Sbjct: 26 IKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPV 85
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L LY M + L PN +TF +L +C S A +G+ H +++G+ + V SLI
Sbjct: 86 SALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLI 145
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV------------------- 319
SMY + G +E+A VF+ +D+VS+ ++I GYA G
Sbjct: 146 SMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNA 205
Query: 320 ------------RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
A++LF+EMMK V+PD T + V+S+C +E G+ + HG
Sbjct: 206 MISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHG 265
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
L + ++DL + G +E A + + Y + + W
Sbjct: 266 FGSNLKIVNALIDLYIKCGEVETACGLFEGLS-YKDVISW 304
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCG----NVEEAVYVFNNMHGKDIVSWNSMIAG 311
R H Q I+ G + + LI +C + A+ VF + +++ WN+M G
Sbjct: 19 RMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 77
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+A V A+ L+ M+ + P+ TF ++ SC EG+ + K G +
Sbjct: 78 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 137
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQ 397
L ++ ++ + + G LE+AR Q
Sbjct: 138 LYVHTSLISMYVQNGRLEDARKVFDQ 163
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 211/365 (57%), Gaps = 23/365 (6%)
Query: 117 EKLISMHHDLHRER-LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+K + + + R+ L D T +T+CG+ ++ G I +G NV+V SS
Sbjct: 245 DKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESS 304
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
L+ +Y KCR++ + VF+ M V+N+VSWTA++ + Q + + ++R + + +
Sbjct: 305 LVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFREGK----KVD 360
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++F ++L AC G A+ QG+ HCQ ++ + + ++L+ +Y KCG ++ A +F
Sbjct: 361 TYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFV 420
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
M +++++WNSMI G+AQ+G LF+EM+++ ++PD I+F+GV+ +C H GLV++
Sbjct: 421 RMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQ 480
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA----- 409
GK YF +M + + +KP ++HY+C++DLLGRAGLLEEA + I+ +W
Sbjct: 481 GKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGAC 540
Query: 410 ------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
A+ + L+P+ ++V LAN+Y V WD A ++R LM +G+ PG
Sbjct: 541 AASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPG 600
Query: 458 CSWIE 462
SWIE
Sbjct: 601 TSWIE 605
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 148/282 (52%), Gaps = 3/282 (1%)
Query: 130 RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV-IID 188
RL F ++ + +C + G + AI++G + +VG+SL+ LY K + +
Sbjct: 55 RLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFE 114
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +VF+ + ++++SWT++I + + + LEL+ M +EPN FT ++++ AC+G
Sbjct: 115 ARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSG 174
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
G L G+ H + GF ++ +LI MY + V++A+ VF + D + W S+
Sbjct: 175 LGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSI 234
Query: 309 IAGYAQHGLAVRAIDLFEEMM-KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
I+ + ++ + +A+ F M K + PD TF V+++C + G +++GK + G
Sbjct: 235 ISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSG 294
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
L + S +VD+ G+ L+ +++ +M + N V W A
Sbjct: 295 LSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSV-KNLVSWTA 335
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 198/323 (61%), Gaps = 18/323 (5%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
N+ ++L+ ++K + A K+F+ MP R+V+SWT++I ++Q Q ++L++ M
Sbjct: 282 NIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMM 341
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ ++P+ T S+LSAC G L G + H R G + I V NSLI MYCKCG VE
Sbjct: 342 AAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVE 401
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+A+ VF+ M KD VSW S+I+G A +G A A+DLF +M+++ V+P TF+G++ +C
Sbjct: 402 KALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACA 461
Query: 349 HGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV +G YF+SM + HGL P + HY CVVDLL R+G +++A +FIK+MPI P+ V+W
Sbjct: 462 HAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVW 521
Query: 408 ----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
E A RLL L+P + +V L+N YAGV WD A ++R+LM+D
Sbjct: 522 RILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDS 581
Query: 451 GLKTNPGCSWIEIMNVVYRFRAE 473
++ G S IE+ +V + E
Sbjct: 582 DVQKPSGSSSIEVDGMVSNYSQE 604
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 184/401 (45%), Gaps = 56/401 (13%)
Query: 63 TKTEVHLRLIQDFLQTDSKHLDSQKFNHDFTGTNSTFGSSNVFDQL-------------- 108
T E+H LI+ L TD + ++ + TN + VF+Q+
Sbjct: 32 TSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTN-LHKAHLVFNQIECPTLVVWNHMIRG 90
Query: 109 ---LDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG 165
D PV + I M+ +H + + + L +C +I G A++ G
Sbjct: 91 LSQSDHPV----EAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLG 146
Query: 166 FIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
F + ++V ++LI +Y+ C + A K+F+ M R++VSW +I ++Q + L L+
Sbjct: 147 FESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFD 206
Query: 226 MMRNSMLEPNDFTFTSILSACTGSG---------------------ALGQ------GRSA 258
M + ++ + T I+ AC+ G LG GR +
Sbjct: 207 AMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRS 266
Query: 259 HCQTIRMGFFSY-----IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
+ + G F I N+L+ + K GN+ A +F+NM +D++SW SMI GY+
Sbjct: 267 LAE-LAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYS 325
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q A+ LF+EMM +VKPD +T V+S+C H G ++ G + +HG++ ++
Sbjct: 326 QASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIY 385
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ ++D+ + G++E+A + +M ++V W + S L
Sbjct: 386 VGNSLIDMYCKCGMVEKALEVFHRMK-DKDSVSWTSVISGL 425
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 22/287 (7%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVII-DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
IRT + ++ S +I YS + A+ VF ++ +V W +I +Q
Sbjct: 41 IRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEA 100
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+ +Y M + + N+ T + AC + GR H +++GF SY+ V+N+LI M
Sbjct: 101 IHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHM 160
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y CG + A +F+ M +D+VSWN++I GY+Q+ + LF+ M +K DA+T
Sbjct: 161 YAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTM 220
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKP---ELDHY--SCVVDLLGRAGLLEEARDFI 395
+ +I +C H G E + DSM K+ +K E+D Y + ++D+ GR L E A+
Sbjct: 221 VKIILACSHLGDWE----FADSMVKY-IKENNLEIDVYLGNTLIDMYGRRSLAELAQGVF 275
Query: 396 KQMPIYPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAAR 442
+M N V W A H ++ NL A + +D +
Sbjct: 276 DRMR-ERNIVSWNA----------LVMGHAKVGNLTAARKLFDNMPK 311
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + ++ ++K D +++ +++C + G R G A++YVG+SLI +
Sbjct: 334 VKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDM 393
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y KC ++ A +VF M ++ VSWT++I+ A + L+L+ M ++P TF
Sbjct: 394 YCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTF 453
Query: 240 TSILSACTGSGALGQG-------RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
IL AC +G + +G S H G ++ ++ + + GN+++A
Sbjct: 454 VGILLACAHAGLVNKGLEYFESMESVH------GLVPAMKHYGCVVDLLSRSGNIDKAYE 507
Query: 293 VFNNMH-GKDIVSWNSMIAGYAQHGLAVRA 321
M D+V W +++ HG V A
Sbjct: 508 FIKKMPIVPDVVVWRILLSACKLHGNVVLA 537
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 200/366 (54%), Gaps = 18/366 (4%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G ++ G +++V +LI +YSKC I DA VFEEMP + V W IIA +A
Sbjct: 95 GRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYAL 154
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
+ L++Y MR+S ++ + FTF+ I+ C ++ + AH IR GF S I
Sbjct: 155 HGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVA 214
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV 333
+L+ Y K G +E+A +VF+ M K+++SWN++I GY HG A++LFE+M+++R+
Sbjct: 215 NTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERM 274
Query: 334 KPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG-LKPELDHYSCVVDLLGRAGLLEEAR 392
P+ ITFL V+S+C H GL E G F SM + +KP HY+C+++L+GR GLL+EA
Sbjct: 275 NPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEAL 334
Query: 393 DFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVR 435
I+ P P A +W AAE +EP+ ++ L N+Y
Sbjct: 335 ALIRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAG 394
Query: 436 CWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
+AA V +K KGL+ P CSWIE+ + F + D + + EI +D L+ ++
Sbjct: 395 NLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEIS 454
Query: 496 TLGYVP 501
GYVP
Sbjct: 455 KYGYVP 460
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 136/251 (54%), Gaps = 7/251 (2%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I GF + Y+ + ++ ++ KC ++IDA ++F+EMP RN+VSW II+ V +
Sbjct: 2 IDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVD---VGDFM 58
Query: 222 ELYRMMRNSMLEPND---FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
E +R+ N E +D FTF ++ A G + GR H T++MG I V+ +LI
Sbjct: 59 EAFRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALI 118
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
MY KCG++E+A +VF M K V WN++IAGYA HG + A+D++ EM VK D
Sbjct: 119 DMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHF 178
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
TF ++ C VE K ++ +HG ++ + +VD + G +E+AR +M
Sbjct: 179 TFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKM 238
Query: 399 PIYPNAVIWEA 409
N + W A
Sbjct: 239 A-SKNVISWNA 248
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 218/419 (52%), Gaps = 63/419 (15%)
Query: 96 NSTFGSSNVFDQLLDTPVV--------------DVEKLISMHHDLHRERLKVDASFLSTA 141
NS+F + + QLLD V IS+ + L + D S
Sbjct: 60 NSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFV 119
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKC------RVIID------- 188
+ +C ++R G + G +N+++ + ++ LY+ C R + D
Sbjct: 120 LKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDV 179
Query: 189 ------------------AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
AYK+F EMP RNV SWT++I +AQ + ++L+ M ++
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
L PN+ T ++L AC G L GR H + R G+ I+V N+LI MY KCG +E+A
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDA 299
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F+NM + +VSW++MIAG A HG A A+ LF +M+ VKP+A+TF+G++ +C H
Sbjct: 300 CRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHM 359
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-- 407
G+VE+G+ YF SM + +G+ P ++HY C+VDL RAGLL+EA +FI MPI PN V+W
Sbjct: 360 GMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGA 419
Query: 408 ---------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKG 451
EA L+P +V L+N+YA W+ ARVRKLM+D+G
Sbjct: 420 LLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRG 478
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 147/354 (41%), Gaps = 59/354 (16%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F+ + V W + +FA+ + L+ +R + P+ +T + +L AC+
Sbjct: 69 IFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD 128
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN----- 306
+ G+ H ++G S + + N ++ +Y CG + A VF+ M +D+++WN
Sbjct: 129 VRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188
Query: 307 --------------------------SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
SMI GYAQ G + AIDLF EM + P+ +T
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
+ V+ +C G + G+ D + G + + + ++D+ + G LE+A M
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNME- 307
Query: 401 YPNAVIWEAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
V W A +A L A R D A K++ + G+K N ++
Sbjct: 308 ERTVVSWSA----------------MIAGLAAHGRAEDALALFNKMI-NTGVKPN-AVTF 349
Query: 461 IEI------MNVVYRFRAEDKSNTRLSEILPVLDF---LVDQMKTLGYVPEVHE 505
I I M +V + R S TR I+P ++ +VD G + E HE
Sbjct: 350 IGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHE 403
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 200/335 (59%), Gaps = 18/335 (5%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
++V++G++L+ +Y KC A ++F MPV+N+VSW ++I+ A + L ++R M
Sbjct: 271 SDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRM 330
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ L+P+ T +L++C G L G+ H + + VAN+L+ MY KCG++
Sbjct: 331 QTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSI 390
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
++A VF M KD+ S+ +MI G+A HG A RA+ +F EM + V+PD +T +GV+S+C
Sbjct: 391 DQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSAC 450
Query: 348 RHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVI 406
H GL+EEG+ +F M++ + L+P+ +HY C+VDLLGRAGL+ EA F +MPI P+A +
Sbjct: 451 SHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASV 510
Query: 407 W----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKD 449
W E +L+ +EPE ++ ++N+Y+ W A + RK MK
Sbjct: 511 WGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQ 570
Query: 450 KGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEIL 484
+K PGCS IE+ +V+ FR +KS+ + E++
Sbjct: 571 NNIKKTPGCSSIEVDGMVHEFRKGEKSHPKSREMI 605
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 179/370 (48%), Gaps = 18/370 (4%)
Query: 35 KLKQISSSKSLHKALRV-LDIISPRTRDSTKTEVHLRL---IQDFLQTDSKHLDSQKFNH 90
+L +SS KS+ + ++ II T ST T + L I LQ D DS + N
Sbjct: 29 QLLLLSSCKSVREIKQIHASIIKANTTRSTTTLPIISLCTKITSLLQQDVHLADSIQ-NL 87
Query: 91 DFTGTNSTFGSSN---VFD---QLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTS 144
+ + + F N +F+ Q L T + S++ + L D L + +
Sbjct: 88 WYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKA 147
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C + +I+TG +N++V ++L+ Y+ I KVF++ P +++SW
Sbjct: 148 CSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISW 207
Query: 205 TAIIAAFAQ-EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT--GSGALGQGRSAHCQ 261
T +I A+++ + + +RM + + T +LSAC+ G LG+ A+
Sbjct: 208 TTLIQAYSKMGYPSEAIAAFFRMNCTA----DRMTLVVVLSACSQLGDFTLGKKILAYMD 263
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
S + + N+L+ MY KCG A +F+ M K++VSWNSMI+G A GL A
Sbjct: 264 HHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEA 323
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
+ +F M +KPD++T +GV++SC + G +E GK + K+ +K + + +VD+
Sbjct: 324 LHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDM 383
Query: 382 LGRAGLLEEA 391
+ G +++A
Sbjct: 384 YAKCGSIDQA 393
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 220/405 (54%), Gaps = 18/405 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + RE ++ D L + C R++ G +R+G ++ VGSSL
Sbjct: 156 EESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSL 215
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+Y +C + D +P N+VS I+ Q + LE + +MR + +E N
Sbjct: 216 AHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANA 275
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF S +++C+ AL QG+ H I+ G + V SL+ MY +CG + ++ V
Sbjct: 276 VTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLE 335
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
G D+V ++MI+ Y HG +A+ LF++MM +P+ +TFL ++ +C H GL +EG
Sbjct: 336 YSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEG 395
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA------ 409
F+ M K +GL+P + HY+C+VDLLGR+G L EA D I MP+ P+ VIW+
Sbjct: 396 MNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACK 455
Query: 410 -----------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AE + L+P +A++V L+N+ A W+ ++VR+ M+++ ++ PG
Sbjct: 456 TQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGV 515
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
SW+E+ +++F D+S++R EI+ L+ ++ +++ GY P++
Sbjct: 516 SWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDM 560
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV + LI Y K + A K+F+EMP RNV +W A++A + L + MR
Sbjct: 107 NVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMR 166
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
++P+++ S+ C G + GR H +R G + V +SL MY +CG +
Sbjct: 167 REGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLR 226
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+ + +IVS N+ I+G Q+G A A++ F M V+ +A+TF+ ++SC
Sbjct: 227 DGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCS 286
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ +G+ K G+ + + +V + R G L ++
Sbjct: 287 DLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDS 329
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N LI Y K G++E A +F+ M +++ +WN+M+AG GL ++ F M ++ ++
Sbjct: 112 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 171
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
PD + C V G+ + + GL ++ S + + R G L +
Sbjct: 172 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 231
Query: 395 IKQMP 399
++ +P
Sbjct: 232 LRALP 236
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 250/486 (51%), Gaps = 47/486 (9%)
Query: 67 VHLRLIQDFLQT-----------DSKHLDSQKFNHDFTGTNS---TFGSSNVFDQLLDTP 112
VH LI ++Q S H D + TG S + +FD++
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 184
Query: 113 VVDVEKLISMHHD---------LHRERLKV----DASFLSTAVTSCGSTRNIRGGAPYQC 159
VV +IS + + L +E +K D S + + V++C + +I G
Sbjct: 185 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 244
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
GF +N+ + ++LI LY KC + A +FE + ++V+SW +I +
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 304
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSL 277
L L++ M S PND T SIL AC GA+ GR H + G + SL
Sbjct: 305 ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSL 364
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
I MY KCG++E A VF+++ + + SWN+MI G+A HG A A D+F M K ++PD
Sbjct: 365 IDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 424
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
ITF+G++S+C H G+++ G+ F SM + + + P+L+HY C++DLLG +GL +EA + I
Sbjct: 425 ITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMIN 484
Query: 397 QMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQ 439
M + P+ VIW A++ + +EP+ ++V L+N+YA W++
Sbjct: 485 TMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNE 544
Query: 440 AARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
A++R L+ DKG+K PGCS IEI +VV+ F DK + R EI +L+ + ++ G+
Sbjct: 545 VAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGF 604
Query: 500 VPEVHE 505
VP+ E
Sbjct: 605 VPDTSE 610
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 146/285 (51%), Gaps = 35/285 (12%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+ SC ++ R G ++ G+ ++YV +SLI++Y + + DA KVF++ R+V
Sbjct: 95 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 154
Query: 202 VSWTAIIAAFAQE--------------------WQVDM-----------CLELYRMMRNS 230
VS+TA+I +A + W + LEL++ M +
Sbjct: 155 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 214
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+ P++ T S++SAC S ++ GR H GF S +++ N+LI +Y KCG VE A
Sbjct: 215 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 274
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F + KD++SWN++I GY L A+ LF+EM++ P+ +T L ++ +C H
Sbjct: 275 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 334
Query: 351 GLVEEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G +E G+ VY + K G+ H + ++D+ + G +E A+
Sbjct: 335 GAIEIGRWIHVYINKRLK-GVANASSHRTSLIDMYAKCGDIEAAQ 378
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 35/280 (12%)
Query: 162 IRTGFIANVYVGSSLI---TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
I+TG Y S LI L + A VFE + N++ W + A
Sbjct: 11 IKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPV 70
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L LY M + L PN +TF +L +C S A +G+ H +++G+ + V SLI
Sbjct: 71 SALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLI 130
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV------------------- 319
SMY + G +E+A VF+ +D+VS+ ++I GYA G
Sbjct: 131 SMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNA 190
Query: 320 ------------RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
A++LF+EMMK V+PD T + V+S+C +E G+ + HG
Sbjct: 191 MISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHG 250
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
L + ++DL + G +E A + + Y + + W
Sbjct: 251 FGSNLKIVNALIDLYIKCGEVETACGLFEGLS-YKDVISW 289
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCG----NVEEAVYVFNNMHGKDIVSWNSMIAG 311
R H Q I+ G + + LI +C + A+ VF + +++ WN+M G
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE 371
+A V A+ L+ M+ + P+ TF ++ SC EG+ + K G +
Sbjct: 63 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 372 LDHYSCVVDLLGRAGLLEEARDFIKQ 397
L ++ ++ + + G LE+AR Q
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQ 148
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 234/446 (52%), Gaps = 53/446 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ I+M+ + +E + + S + +CG+ +++ G + R VYVG+++
Sbjct: 131 DEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTM 190
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA-------------------------- 210
I +Y KC I A KVF+EMP R+V+SWT +IAA
Sbjct: 191 IDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWT 250
Query: 211 -----FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
FAQ + LE + M S + ++ T +SAC GA A +
Sbjct: 251 AMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKS 310
Query: 266 GFF--SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ ++ + ++LI MY KCGNVEEAV VF +M+ K++ +++SMI G A HG A A+
Sbjct: 311 GYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALH 370
Query: 324 LFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDL 381
LF M+ Q +KP+ +TF+G + +C H GLV++G+ FDSM + G++P DHY+C+VDL
Sbjct: 371 LFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDL 430
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATH 424
LGR G L+EA + IK M + P+ +W AAE LEP+ +
Sbjct: 431 LGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNY 490
Query: 425 VQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN-VVYRFRAEDKSNTRLSEI 483
+ L+N+YA W RVRKL+K+KGLK P SW+ N +++F + ++ ++I
Sbjct: 491 ILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKI 550
Query: 484 LPVLDFLVDQMKTLGYVPEVHEEKVD 509
L+ LV+++ LGY P++ D
Sbjct: 551 QDKLEELVERLTVLGYQPDLSSVPYD 576
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 126/273 (46%), Gaps = 37/273 (13%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAY--KVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
+R G + Y+ + LI +K V +D Y +V E + RN WTA+I +A E + D
Sbjct: 73 LRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDE 132
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+ +Y MR + P FTF+++L AC L GR H QT R+ F ++ V N++I
Sbjct: 133 AIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMID 192
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA----------------------------- 310
MY KC +++ A VF+ M +D++SW +IA
Sbjct: 193 MYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAM 252
Query: 311 --GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
G+AQ+ A++ F+ M K ++ D +T G IS+C G + K G
Sbjct: 253 VTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGY 312
Query: 369 KPELDHY---SCVVDLLGRAGLLEEARDFIKQM 398
P DH S ++D+ + G +EEA + M
Sbjct: 313 SPS-DHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 219/395 (55%), Gaps = 25/395 (6%)
Query: 126 LHRERLKVDASFLSTAVTSC-GSTRNIRGGAPYQCLAIRT----GFIANVYVGSSLITLY 180
+ + ++ DA +S+ + C G G C ++ G ++V++G LI +Y
Sbjct: 219 MQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMY 278
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTF 239
S+ ++ +VF+ M RNV SWTA+I + + D L L+R M+ +EPN +
Sbjct: 279 SRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSL 338
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF-NNMH 298
S+L AC+ L GR H +R + + + N+LI MY KCG+++ A VF ++
Sbjct: 339 VSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSL 398
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG-K 357
KD +SW+SMI+GY HG AI L+++M++ ++PD IT +G++S+C GLV EG
Sbjct: 399 CKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLN 458
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES----- 412
+Y + +G++P L+ +C+VD+LGRAG L+ A DFIK +P+ P +W A S
Sbjct: 459 IYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIH 518
Query: 413 ----------RLL--LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSW 460
R L LEP+ + +V ++NLYA R WD A VR++MKDK L+ PGCSW
Sbjct: 519 GDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSW 578
Query: 461 IEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMK 495
I I N + F DK++ + I +LD L+ M
Sbjct: 579 ISINNKTHCFYVADKAHPSSTSIYNMLDDLLLTMN 613
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 132/258 (51%), Gaps = 9/258 (3%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM- 219
+IRTGF+++ V +S++++Y KC ++ KVF+EM +RN SW +IA +A +
Sbjct: 150 SIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFR 209
Query: 220 --CLELYRMMRNSMLEPNDFTFTSILSACTGS-GALGQGRSAHCQTIR----MGFFSYIQ 272
E + M+ + P+ +T +S+L C G G GR HC ++ +G S +
Sbjct: 210 EETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVH 269
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM-MKQ 331
+ LI MY + V VF+ M +++ SW +MI GY ++G + A+ LF +M +
Sbjct: 270 LGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVID 329
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
V+P+ ++ + V+ +C + G+ + L E+ + ++D+ + G L+ A
Sbjct: 330 GVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSA 389
Query: 392 RDFIKQMPIYPNAVIWEA 409
R + + +A+ W +
Sbjct: 390 RRVFEDDSLCKDAISWSS 407
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 165 GFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY 224
G N ++ + LI Y+ C+ + VF+ + +NV W ++I + + +L+
Sbjct: 53 GLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLF 112
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M +S + P+DFT +++ + GAL G+S H ++IR GF S VANS++SMYCKC
Sbjct: 113 NQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKC 172
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQRVKPDAITFL 341
GN +E+ VF+ M ++ SWN +IAGYA G + ++M V+PDA T
Sbjct: 173 GNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTIS 232
Query: 342 GVISSCRHG-GLVEEGKVYFDSMAKH----GLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
++ C G + G+ + K+ GL ++ C++D+ R+ + R
Sbjct: 233 SLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFD 292
Query: 397 QMPIYPNAVIWEA 409
+M N W A
Sbjct: 293 RMKCR-NVFSWTA 304
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
R +H + + +G +A LI Y C + + VF+++ K++ WNS+I G ++
Sbjct: 43 RQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGCVKN 102
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
L A LF +M V PD T + G + GK + G +
Sbjct: 103 RLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVA 162
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPI 400
+ ++ + + G +E+R +M I
Sbjct: 163 NSIMSMYCKCGNFDESRKVFDEMTI 187
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 221/414 (53%), Gaps = 52/414 (12%)
Query: 139 STAVTSCGSTRNIRG--GAPYQCLAIRTGFIANVYVGSSLITLYSKC------------- 183
S ++ + ++RG G + +R G ++ +V +SLI Y C
Sbjct: 71 SLSLNAAAKIPHLRGTLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQT 130
Query: 184 --------RVIIDAY----------KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR 225
V+I Y ++F+ MP RNVVSWT +I A+AQ Q +E++R
Sbjct: 131 TDKDIFCWNVMISGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFR 190
Query: 226 MMR-NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
M+ +EP+ S+LSAC GA+ G H +R G I + N++I MY K
Sbjct: 191 RMQVEEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKL 250
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G V +AV VF M K +V+W ++IAG+A HGL + AI++F M + V P+ +TFL ++
Sbjct: 251 GCVRKAVEVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAIL 310
Query: 345 SSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPN 403
S+C H GL + G+ YF M +++ +K ++HY C+VDLLGRAG L EA+D ++ MP N
Sbjct: 311 SACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKAN 370
Query: 404 AVIW-------------EAAESRLL----LEPECAATHVQLANLYAGVRCWDQAARVRKL 446
A IW E + LL LEP + ++ L+N+YA WD +++RK
Sbjct: 371 AAIWGALLAAARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQ 430
Query: 447 MKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYV 500
MKD+GL+ PG S IE+ +V+ F + D S+ L +I VL + MK++ +V
Sbjct: 431 MKDRGLRNVPGASSIEVDGMVHEFTSRDGSHPCLHKICKVLCEITTDMKSISFV 484
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 5/210 (2%)
Query: 109 LDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA 168
+ PV VE M + E ++ D L + +++CG + G +R G
Sbjct: 179 MKQPVEAVEVFRRMQVE---EGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCW 235
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
+ + +++I +Y K + A +VFE M ++VV+WT +IA FA +E++R M
Sbjct: 236 QIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRME 295
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGR-SAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ PND TF +ILSAC+ G GR + ++ ++ + + G +
Sbjct: 296 MENVAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYL 355
Query: 288 EEAVYVFNNMHGK-DIVSWNSMIAGYAQHG 316
EA + +M K + W +++A HG
Sbjct: 356 MEAQDLVQDMPFKANAAIWGALLAAARTHG 385
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 229/433 (52%), Gaps = 56/433 (12%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRN-------IRGGAPYQCLAIRTGFIANVYVGSSLIT 178
LH + L A L+ V T + I G A++ GF +++YV + L+
Sbjct: 55 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLD 114
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC------------------ 220
+Y++ ++ A ++F+ MP +++VS TA++ +A+ ++D
Sbjct: 115 VYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVM 174
Query: 221 -------------LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
L L+R M + +PN+ T S+LSAC GAL GR H G
Sbjct: 175 IDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGI 234
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ V +L+ MY KCG++E+A VF+ + KD+V+WNSMI GYA G + A+ LF+
Sbjct: 235 QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKS 294
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAG 386
M + + P ITF+G++S+C H G V EG F+ M ++G++P+++HY C+V+LLGRAG
Sbjct: 295 MCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAG 354
Query: 387 LLEEARDFIKQMPIYPNAVIWEAAES---------------RLLLEPECA--ATHVQLAN 429
+E+A + +K M I P+ V+W LL++ A T++ L+N
Sbjct: 355 HVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSN 414
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
+YA V WD AR+R +MKD G+K PGCS IE+ N V+ F A ++ + EI +L+
Sbjct: 415 IYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEE 474
Query: 490 LVDQMKTLGYVPE 502
+ +K+ GY P+
Sbjct: 475 INGWLKSHGYTPQ 487
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+V WTAII A + L Y M +EPN FTF+SIL C + G++ H
Sbjct: 39 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALH 94
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-----------------HG--- 299
Q +++GF S + V L+ +Y + G+V A +F+ M HG
Sbjct: 95 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 154
Query: 300 -----------KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR 348
+D V WN MI GY Q+G+ A+ LF M+K + KP+ +T L V+S+C
Sbjct: 155 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 214
Query: 349 HGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
G +E G+ + +G++ + + +VD+ + G LE+AR
Sbjct: 215 QLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDAR 258
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y G ++ +V +F + W ++I G+A GL +A++ + +M+ Q V+P+A TF
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++ C +E GK K G +L + ++D+ R G + A+ MP
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
>gi|56201767|dbj|BAD73217.1| hypothetical protein [Oryza sativa Japonica Group]
gi|56201874|dbj|BAD73324.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125569384|gb|EAZ10899.1| hypothetical protein OsJ_00742 [Oryza sativa Japonica Group]
Length = 569
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/361 (37%), Positives = 194/361 (53%), Gaps = 26/361 (7%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP------VRNVVSWTAIIAAFAQE 214
A R N ++LIT Y+ R+ A V +M NVVSW+A+I FA
Sbjct: 205 AFRDATAKNTVTWNTLITSYAAARLCDKALDVLAQMEQIGGTVAPNVVSWSAVIGGFASS 264
Query: 215 WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
D LEL+R M+ L PN T ++LSAC AL GR H ++ + V
Sbjct: 265 GDTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRHSLVE 324
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N LI+MY KCG V A VF+ M +D++SWNSM+AGY HGL A+ LF +M V+
Sbjct: 325 NGLINMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGLCDEALALFTDMAGATVE 384
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARD 393
PD +TF+ V+S+C H G V EG+ FD M + H + P ++HY+C+V LLGRAGLL +A +
Sbjct: 385 PDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMVYLLGRAGLLRDASE 444
Query: 394 FIKQMPIYPNAVIWEA-------------AESR----LLLEPECAATHVQLANLYAGVRC 436
++ MP+ P+ +W A AE+ L E + H+ + NLYA
Sbjct: 445 LVETMPVRPDLCVWGALLNSCRIHGDAAMAEATIANVLQSEDQSTGNHMLITNLYAMCGM 504
Query: 437 WDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN--TRLSEILPVLDFLVDQM 494
WD++ +VR + K+ GL+ NPG SWIE+ N V F A T ++ +LD L +M
Sbjct: 505 WDESKKVRVMTKEAGLRKNPGQSWIEVDNKVVAFAAGSAPPNLTGAEDVFGMLDDLYAEM 564
Query: 495 K 495
+
Sbjct: 565 E 565
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR--------------------- 199
A+ G A V ++ YS+ DA +VF+ MP
Sbjct: 34 ALHLGLHAQHDVAGQILAAYSRLGRAADARRVFDAMPPGRTTFHWNALISAYSSGCDPDA 93
Query: 200 ---------------NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ V+WTA+++A A+ + L+L+ M+ S E N + LS
Sbjct: 94 ARDAFARMAAAGARPDAVTWTALLSAHARSGKHADVLQLFGEMQRSGCEGNAESMAVALS 153
Query: 245 ACTGSG--ALGQGRSAH-CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
AC +G AL +G++ H C ++ Y+ V NSLI MY K G +++A F + K+
Sbjct: 154 ACPYAGDLALAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFRDATAKN 213
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEM--MKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
V+WN++I YA L +A+D+ +M + V P+ +++ VI G +
Sbjct: 214 TVTWNTLITSYAAARLCDKALDVLAQMEQIGGTVAPNVVSWSAVIGGFASSGDTDRALEL 273
Query: 360 FDSMAKHGLKPELDHYSCV----VDLL 382
F M + L P + + V VDLL
Sbjct: 274 FRRMQQQWLSPNVVTMATVLSACVDLL 300
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 102/209 (48%), Gaps = 2/209 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D ++ + + + ++ L + ++T +++C +R G A++ + V +
Sbjct: 266 DTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRHSLVEN 325
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
LI +Y+KC + A KVF+ M R+++SW +++A + D L L+ M + +EP
Sbjct: 326 GLINMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGLCDEALALFTDMAGATVEP 385
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYV 293
+ TF ++LSAC +G + +GR + +R S ++ ++ + + G + +A +
Sbjct: 386 DGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMVYLLGRAGLLRDASEL 445
Query: 294 FNNMHGK-DIVSWNSMIAGYAQHGLAVRA 321
M + D+ W +++ HG A A
Sbjct: 446 VETMPVRPDLCVWGALLNSCRIHGDAAMA 474
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
PN +T L A + H + +G + VA +++ Y + G +A V
Sbjct: 9 PNSYTLPLALRAAASPRV---ASAVHAHALHLGLHAQHDVAGQILAAYSRLGRAADARRV 65
Query: 294 FNNMH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGL 352
F+ M G+ WN++I+ Y+ A D F M +PDA+T+ ++S+ G
Sbjct: 66 FDAMPPGRTTFHWNALISAYSSGCDPDAARDAFARMAAAGARPDAVTWTALLSAHARSGK 125
Query: 353 VEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ F M + G + + + + AG L A+
Sbjct: 126 HADVLQLFGEMQRSGCEGNAESMAVALSACPYAGDLALAK 165
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 220/405 (54%), Gaps = 18/405 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ + + RE ++ D L + C R++ G +R+G ++ VGSSL
Sbjct: 48 EESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSL 107
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+Y +C + D +P N+VS I+ Q + LE + +MR + +E N
Sbjct: 108 AHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANA 167
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF S +++C+ AL QG+ H I+ G + V SL+ MY +CG + ++ V
Sbjct: 168 VTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLE 227
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
G D+V ++MI+ Y HG +A+ LF++MM +P+ +TFL ++ +C H GL +EG
Sbjct: 228 YSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEG 287
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA------ 409
F+ M K +GL+P + HY+C+VDLLGR+G L EA D I MP+ P+ VIW+
Sbjct: 288 MNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACK 347
Query: 410 -----------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AE + L+P +A++V L+N+ A W+ ++VR+ M+++ ++ PG
Sbjct: 348 TQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGV 407
Query: 459 SWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
SW+E+ +++F D+S++R EI+ L+ ++ +++ GY P++
Sbjct: 408 SWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDM 452
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI Y K + A K+F+EMP RNV +W A++A + L + MR ++P+
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
++ S+ C G + GR H +R G + V +SL MY +CG + +
Sbjct: 66 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+ +IVS N+ I+G Q+G A A++ F M V+ +A+TF+ ++SC + +
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185
Query: 356 GKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
G+ K G+ + + +V + R G L ++
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDS 221
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N LI Y K G++E A +F+ M +++ +WN+M+AG GL ++ F M ++ ++
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
PD + C V G+ + + GL ++ S + + R G L +
Sbjct: 64 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123
Query: 395 IKQMP 399
++ +P
Sbjct: 124 LRALP 128
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
+SWN +I GY ++G A LF+EM + V T+ +++ + GL EE +F +
Sbjct: 1 MSWNILIGGYVKNGDLETARKLFDEMPARNVA----TWNAMVAGLTNSGLNEESLGFFFA 56
Query: 363 MAKHGLKPE 371
M + G++P+
Sbjct: 57 MRREGMQPD 65
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 223/413 (53%), Gaps = 18/413 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D K + + +H++ + D L+T +CG I G AI++G+ +++V S
Sbjct: 497 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++ +Y KC + A F+ +PV + V+WT +I+ + + + ++ MR + P
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
++FT ++ A + AL QGR H +++ + V SL+ MY KCG++++A +F
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF 676
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ +I +WN+M+ G AQHG + LF++M +KPD +TF+GV+S+C H GLV
Sbjct: 677 KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA---- 409
E + SM +G+KPE++HYSC+ D LGRAGL+++A + I+ M + +A ++
Sbjct: 737 EAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAA 796
Query: 410 -------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A L LEP ++ +V L+N+YA WD+ R +MK +K +P
Sbjct: 797 CRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 856
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVD 509
G SWIE+ N ++ F +D+SN + I + ++ +K GYVPE VD
Sbjct: 857 GFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVD 909
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 3/255 (1%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G C+A++ G + V +SLI +Y K R A VF+ M R+++SW ++IA AQ
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG-SGALGQGRSAHCQTIRMGFFSYIQ 272
+ L+ + L+P+ +T TS+L A + L + H I++ S
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V+ +LI Y + ++EA +F H D+V+WN+M+AGY Q + + LF M KQ
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ D T V +C + +GK K G +L S ++D+ + G + A+
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 393 DFIKQMPIYPNAVIW 407
+P+ P+ V W
Sbjct: 573 FAFDSIPV-PDDVAW 586
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 127/251 (50%), Gaps = 6/251 (2%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
AI+ +++ +V ++LI YS+ R + +A +FE ++V+W A++A + Q
Sbjct: 443 AIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKT 501
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
L+L+ +M +DFT ++ C A+ QG+ H I+ G+ + V++ ++ M
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 561
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
Y KCG++ A + F+++ D V+W +MI+G ++G RA +F +M V PD T
Sbjct: 562 YVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 341 --LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L SSC +E+G+ + K + + +VD+ + G +++A K++
Sbjct: 622 ATLAKASSCLTA--LEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI 679
Query: 399 PIYPNAVIWEA 409
+ N W A
Sbjct: 680 EMM-NITAWNA 689
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ-----VDMCLELYR 225
++ ++LI++YSKC + A +VF++MP R++VSW +I+AA+AQ + + L+R
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
++R ++ + T + +L C SG + S H ++G VA +L+++Y K G
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
V+E +F M +D+V WN M+ Y + G AIDL + P+ IT
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%)
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
++ + Q L+ + M S +E + TF +L+ +L G+ HC +++G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ V+NSLI+MYCK A VF+NM +D++SWNS+IAG AQ+GL V A+ LF +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 328 MMKQRVKPDAITFLGVISS 346
+++ +KPD T V+ +
Sbjct: 407 LLRCGLKPDQYTMTSVLKA 425
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 117/303 (38%), Gaps = 47/303 (15%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS + C + + + A + G + +V +L+ +Y K + + +FEEMP
Sbjct: 148 LSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
R+VV W ++ A+ + + ++L +S L PN+ T +L+ +G +
Sbjct: 208 YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL-RLLARISGDDSDAGQVK 266
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI--------------V 303
+ S I N +S Y G + F +M D+ V
Sbjct: 267 SFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAV 326
Query: 304 SWNSMIAGYAQHGLAVR-AIDL------------------------FEEMMKQRVKPDAI 338
+S+ G H +A++ +DL F+ M ++ D I
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSER----DLI 382
Query: 339 TFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
++ VI+ GL E F + + GLKP D Y+ + +L A L E KQ+
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP--DQYT-MTSVLKAASSLPEGLSLSKQV 439
Query: 399 PIY 401
++
Sbjct: 440 HVH 442
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 210/378 (55%), Gaps = 18/378 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + + ++ + D + L+ ++S + GG ++ + F ++Y+ S L
Sbjct: 401 KEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGL 460
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKC + A ++F+ + ++V W +++A + ++ MR + P+
Sbjct: 461 IGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQ 520
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F++ ++LS C +L QGR H Q R G+ + V ++LI MY KCG+V+ A +VF+
Sbjct: 521 FSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDM 580
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M GK+ V+WN MI GYAQ+G A+ L+E+M+ KPD ITF+ V+++C H GLV+ G
Sbjct: 581 MLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTG 640
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
F+SM + HG++P +DHY+C++D LGRAG L EA I +MP + +IWE
Sbjct: 641 IKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCR 700
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAE L+P+ +A +V LAN+Y+ + WD A VR+LM + +PG
Sbjct: 701 VYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGY 760
Query: 459 SWIEIMNVVYRFRAEDKS 476
SWIE N + F +D
Sbjct: 761 SWIEHKNGMQAFMVDDNG 778
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 205/430 (47%), Gaps = 52/430 (12%)
Query: 36 LKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTD----SKHLDSQKFNHD 91
L Q K H A +++ R+R S T + RLI+ + + + S+ L Q D
Sbjct: 11 LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRD 70
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVE-----------------------KLISMHHDLHR 128
N+ G+ +L D V+ E K + +++ + R
Sbjct: 71 IYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSR 130
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
E L++ +++CG+ ++ G ++I+ G N+YVG++L+ +Y+KCR I D
Sbjct: 131 EGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGD 190
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT- 247
A + F ++P N VS+TA++ A QV+ L+R+M + + + + +S+L C+
Sbjct: 191 AIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSR 250
Query: 248 -GSGALG------------QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
G G G G+ HC TI+ GF S + + NSL+ MY K GN++ A +F
Sbjct: 251 GGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIF 310
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
NM +VSWN MIAGY Q + +AI+ + M +PD IT++ ++ +C G +E
Sbjct: 311 VNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIE 370
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM---PIYPN----AVIW 407
G+ FD M+ P L ++ ++ + +EA ++M ++P+ A+I
Sbjct: 371 AGRQMFDGMS----SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIIL 426
Query: 408 EAAESRLLLE 417
+ +LLE
Sbjct: 427 SSLAGMMLLE 436
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 25/324 (7%)
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
++F+ M ++ SW I++ ++Q ++L+R M+ + P+ T ILS+ G
Sbjct: 374 QMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMM 433
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L GR H + + F + I +A+ LI MY KCG VE A +F+ + DIV WNSM+A
Sbjct: 434 LLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMA 493
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G + + L A F++M ++ + P ++ V+S C + +G+ +A+ G
Sbjct: 494 GLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMN 553
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANL 430
+ S ++D+ + G ++ AR ++ M + N V W ++ +
Sbjct: 554 DAFVGSALIDMYSKCGDVDAAR-WVFDMMLGKNTVTWN-----------------EMIHG 595
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKS----NTRLSE--IL 484
YA C D+A + + M G K + G +++ ++ D N+ E +
Sbjct: 596 YAQNGCGDEAVLLYEDMIGSGEKPD-GITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVE 654
Query: 485 PVLDFLVDQMKTLGYVPEVHEEKV 508
P++D + +LG +HE +V
Sbjct: 655 PLVDHYTCIIDSLGRAGRLHEAEV 678
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 135/308 (43%), Gaps = 60/308 (19%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRG----------------GAPYQCLAIRTGFIANVY 171
R R+ VD+ LS+ + C +R G G CL I+ GF ++++
Sbjct: 231 RNRIHVDSVSLSSVLGVC--SRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLH 288
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
+ +SL+ +Y+K + A +F MP +VVSW +IA + Q+ Q +E + M+
Sbjct: 289 LNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHG 348
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
EP++ T+ ++L AC SG + GR
Sbjct: 349 FEPDEITYVNMLVACIKSGDIEAGRQ---------------------------------- 374
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F+ M + SWN++++GY+Q+ A+ LF EM + V PD T ++SS
Sbjct: 375 -MFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMM 433
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYPNAVIWE 408
L+E G+ K + ++ S ++ + + G +E A+ D I ++ I V W
Sbjct: 434 LLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDI----VCWN 489
Query: 409 AAESRLLL 416
+ + L L
Sbjct: 490 SMMAGLSL 497
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+E S+L C A G+ H +R ++N LI Y KC ++ +
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F+ M +DI +WN+++ Y + A LF EM ++ + +++ +IS+ G
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNI----VSWNTLISALTRNG 116
Query: 352 LVEEGKVYFDSMAKHGLKP 370
++ + M++ G P
Sbjct: 117 FEQKALGVYYRMSREGFVP 135
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 226/393 (57%), Gaps = 19/393 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
EK I + ++ D S + C S + G C I+ + ++G+ +
Sbjct: 184 EKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVI 243
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPN 235
IT+YSK +I +A KVF + ++++SW ++ A + L ++R M+ ++P+
Sbjct: 244 ITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPD 303
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
DFTF +L+AC G ++ G+ H IR + + V+N+L++MY KCG+++ + VF
Sbjct: 304 DFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFR 363
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE 355
+++VSWN++IA + HGL RA++ FE+M + PD++TF+G++++C H GLVEE
Sbjct: 364 RTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEE 423
Query: 356 GKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP--------------- 399
G+VYF+SM + +G+ P ++H+SC++DLLGRAG L+EA ++++++P
Sbjct: 424 GQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSAC 483
Query: 400 -IYPNAVIWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
++ + VI E ++LL L+P + +V L+NLYA W A K++K GLK PG
Sbjct: 484 RLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEPG 543
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
S I++M + +F D S++R+ EI + L
Sbjct: 544 HSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKML 576
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 136/248 (54%), Gaps = 3/248 (1%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSW 204
C + G A++TG ++++ V + +I LYSKC +I A ++F+EM RN+VSW
Sbjct: 13 CAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSW 72
Query: 205 TAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR 264
+AII+ + Q Q + L L+ MR + PN++ F S++SAC AL QG H Q+++
Sbjct: 73 SAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHAQSLK 129
Query: 265 MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDL 324
+G S V+N+LISMY KCG +A+ V N M + VS+N++IAG+ ++ + I+
Sbjct: 130 LGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEA 189
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F+ M ++ PD TF G++ C G M K L+ + ++ + +
Sbjct: 190 FKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSK 249
Query: 385 AGLLEEAR 392
L+EEA
Sbjct: 250 FNLIEEAE 257
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 149/305 (48%), Gaps = 11/305 (3%)
Query: 104 VFDQLLDTPVVDVEKLISMHHD----------LHRERLKVDASFLSTAVTSCGSTRNIRG 153
+FD++ D +V +IS + + R+ + ++ +++C S +
Sbjct: 60 MFDEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMRIVPNEYVFASVISACASLTALSQ 119
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G +++ G ++ +V ++LI++Y KC + DA V M N VS+ A+IA F +
Sbjct: 120 GLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVE 179
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
Q + +E +++MR P+ FTF+ +L CT +G HCQ I++ +
Sbjct: 180 NQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFI 239
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-R 332
N +I+MY K +EEA VF + KD++SWN+++ RA+ +F +M+
Sbjct: 240 GNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCF 299
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
VKPD TF GV+++C + GK + + ++ + +V++ + G ++ +
Sbjct: 300 VKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSY 359
Query: 393 DFIKQ 397
D ++
Sbjct: 360 DVFRR 364
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 241 SILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK 300
S+L C A G S H ++ G S I V+N +I++Y KCGNV A +F+ M +
Sbjct: 8 SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR 67
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
++VSW+++I+GY Q G + A++LF +M R+ P+ F VIS+C
Sbjct: 68 NLVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISAC 111
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 236/438 (53%), Gaps = 33/438 (7%)
Query: 101 SSNVFDQLLDTPVVDVEKLIS-------------MHHDLHRERLKVDASFLSTAVTSCGS 147
+ +FD++ VV LIS + ++ + +K D S + T +++C
Sbjct: 188 AQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQ 247
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+ +I G GF +N+ + ++LI LY KC + A +FE + ++V+SW +
Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTL 307
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR--M 265
I + L L++ M S PN+ T SIL AC GA+ GR H +
Sbjct: 308 IGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 367
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G + + SLI MY KCG++E A VF++M + + SWN+MI G+A HG A A D+F
Sbjct: 368 GVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIF 427
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGR 384
M K ++PD ITF+G++S+C H G+++ G+ F SM + + + P+L+HY C++DLLG
Sbjct: 428 SRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGH 487
Query: 385 AGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQL 427
+GL +EA + I M + P+ VIW A++ + +EP+ + ++V L
Sbjct: 488 SGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLL 547
Query: 428 ANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVL 487
+N+YA W++ A+ R L+ DKG+K PGCS IEI +VV+ F DK + R EI +L
Sbjct: 548 SNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGML 607
Query: 488 DFLVDQMKTLGYVPEVHE 505
+ + ++ G+VP+ E
Sbjct: 608 EEMEVLLEEAGFVPDTSE 625
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 130/228 (57%), Gaps = 4/228 (1%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LI Y+ I A K+F+E+PV++VVSW A+I+ +A+ LEL++ M + ++
Sbjct: 173 TALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVK 232
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P++ T ++LSAC S ++ GR H GF S +++ N+LI +Y KCG VE A +
Sbjct: 233 PDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGL 292
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F + KD++SWN++I GY L A+ LF+EM++ P+ +T L ++ +C H G +
Sbjct: 293 FEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAI 352
Query: 354 EEGK---VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ G+ VY D K G+ + ++D+ + G +E A+ M
Sbjct: 353 DIGRWIHVYIDKRLK-GVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 162 IRTGFIANVYVGSSLI---TLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVD 218
I+TG Y S LI L + A VF+ + N++ W + A
Sbjct: 26 IKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPV 85
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
L LY M + L PN +TF +L AC S A +G+ H +++G + V SLI
Sbjct: 86 SALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLI 145
Query: 279 SMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV------------------- 319
+MY K G E+A VF+ +D+VS+ ++I GYA +G
Sbjct: 146 AMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNA 205
Query: 320 ------------RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
A++LF+EMMK VKPD T + V+S+C +E G+ + HG
Sbjct: 206 LISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHG 265
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
L + ++DL + G +E A + + Y + + W
Sbjct: 266 FGSNLKIVNALIDLYIKCGEVETASGLFEGLS-YKDVISW 304
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY---VFNNMHGKDIVSWNSMIAGY 312
R H + I+ G + + LI + + Y VF+++ +++ WN+M G+
Sbjct: 19 RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
A V A+ L+ M+ + P++ TF ++ +C EG+ + K G +L
Sbjct: 79 ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQ 397
++ ++ + + G E+AR Q
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQ 163
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 231/437 (52%), Gaps = 35/437 (8%)
Query: 91 DFTGTNSTFG-SSNVFDQLLDTPVVD-------------VEKLISMHHDLHRERLKVDAS 136
DF N F + VFD L VV +E+ + + D+ E + +
Sbjct: 183 DFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEF 242
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
LS + +CGS I G C AI+ I ++ V ++L+++Y + ++ + + ++
Sbjct: 243 ALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI 299
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
++VSWT I+A Q + + L M + PN + F+S+LS+C +L QG
Sbjct: 300 ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGM 359
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
HC +++G S I N+LI+MY KCG + A F+ MH D+ SWNS+I G+AQHG
Sbjct: 360 QFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHG 419
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHY 375
A +A+++F +M +KPD TFLGV+ C H G+VEEG+++F M ++ P HY
Sbjct: 420 DANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHY 479
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEP 418
+C++D+LGR G +EA I MP P+A+IW+ AA+ + L
Sbjct: 480 ACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSD 539
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
+A++V ++N+YA W+ A +VR+ M + G+K + GCSWIEI N V+ F + D S+
Sbjct: 540 RDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHP 599
Query: 479 RLSEILPVLDFLVDQMK 495
I +L LV M+
Sbjct: 600 NSDSIYQMLGELVAVMQ 616
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 153/298 (51%), Gaps = 10/298 (3%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E ++M D+ + + + A+ +C +R G LA+R GF + ++GS L
Sbjct: 23 EAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCL 82
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YS+C + A +VF+ M +VV +T++I+AF + + ++ E M L+PN+
Sbjct: 83 IEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNE 142
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTI-RMGFFSY-IQVANSLISMYCKCGNVEEAVYVF 294
T T+IL+AC LGQ H I ++G S + + +LI Y + G + A VF
Sbjct: 143 HTMTTILTACP--RVLGQ--QIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVF 198
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+++H K++VSW SM+ Y + G A+ +F +M+ + V P+ V+ +C GL
Sbjct: 199 DSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL-- 256
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
G+ S KH L ++ + ++ + GR GL+EE + ++ P+ V W A S
Sbjct: 257 -GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE-NPDLVSWTTAIS 312
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
MP +NVV+WT++++ + + + + L ++ M S + PNDF + L AC GAL G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
H +R GF + + LI MY +CG++ A VF+ M D+V + S+I+ + ++
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR-------HGGLVEEGKVYFDSMAKHGL 368
G A + +M+KQ +KP+ T ++++C HG L++ K+ S + +
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIK--KIGLRSQSVYSS 178
Query: 369 KPELDHYS 376
+D YS
Sbjct: 179 TALIDFYS 186
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M K++V+W S+++GY ++G A+ +F +M++ V P+ + +C G + G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ + G + SC++++ R G L A++ +M
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 102
>gi|302143669|emb|CBI22530.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 187/299 (62%), Gaps = 18/299 (6%)
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
L+ + ++ + + FTF S+LS GA+G+G H + ++ G+ S + N+LISMY
Sbjct: 194 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 253
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
+CGN+E A VFN M ++++SW SMI G+A+HG A RA+++F +M++ KP+ IT++
Sbjct: 254 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHQMLETGTKPNEITYVA 313
Query: 343 VISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIY 401
V+S+C H G++ EG+ +F+SM K HG+ P ++HY+C+VDLLGR+GLL EA +FI MP+
Sbjct: 314 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 373
Query: 402 PNAVIW-----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVR 444
+A++W AAE L EP+ A ++ L+NL+A W ++R
Sbjct: 374 ADALVWRTLLGACHVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 433
Query: 445 KLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
K MK++ L GCSWIE+ N V+RF + S+ + +I LD L ++K +GY+P+
Sbjct: 434 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDT 492
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 12/187 (6%)
Query: 135 ASFLSTA--VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
AS LS A + + G I G ++ G+ +N + ++LI++YS+C I A++V
Sbjct: 211 ASLLSGAASIGAMGKGEQIHG------RLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 264
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F EM RNV+SWT++I FA+ LE++ M + +PN+ T+ ++LSAC+ G +
Sbjct: 265 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHQMLETGTKPNEITYVAVLSACSHVGMI 324
Query: 253 GQGRSAHCQTI--RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMI 309
+G+ H ++ G ++ ++ + + G + EA+ N+M D + W +++
Sbjct: 325 SEGQK-HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 383
Query: 310 AGYAQHG 316
HG
Sbjct: 384 GACHVHG 390
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 234/446 (52%), Gaps = 53/446 (11%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ I+M+ + +E + + S + +CGS ++ G + R VYVG+++
Sbjct: 132 DEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTM 191
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA-------------------------- 210
I +Y KC I+ A KVF+EMP R+V+SWT +IAA
Sbjct: 192 IDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFESLPTKDMVAWT 251
Query: 211 -----FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
FAQ + LE + M S + ++ T +SAC GA A +
Sbjct: 252 AMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKS 311
Query: 266 GFF--SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ ++ + ++LI MY KCGNVEEAV VF +M+ K++ S++SMI G A HG A A+D
Sbjct: 312 GYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLATHGRAQEALD 371
Query: 324 LFEEMMKQR-VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDL 381
LF M+ Q +KP+ +TF+G +++C H GLV++G+ F SM + G++P DHY+C+VDL
Sbjct: 372 LFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDL 431
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATH 424
LGRAG L+EA + IK M + P+ +W AAE LEP+ +
Sbjct: 432 LGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLFELEPDIIGNY 491
Query: 425 VQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMN-VVYRFRAEDKSNTRLSEI 483
+ L+N+Y+ W VRKL+K+KGLK P SW+ N +++F + ++ +I
Sbjct: 492 ILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSKKI 551
Query: 484 LPVLDFLVDQMKTLGYVPEVHEEKVD 509
L+ LV+++ LGY P++ D
Sbjct: 552 QDKLEELVERLTALGYQPDLSSVPYD 577
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 37/273 (13%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAY--KVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
+R G + Y+ + LI +K V +D Y +V E + RN WTA+I + E + D
Sbjct: 74 LRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAVIRGYTIEGKFDE 133
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
+ +Y MR + P FTF+++L AC G L GR H QT R+ F ++ V N++I
Sbjct: 134 AIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMID 193
Query: 280 MYCKC-------------------------------GNVEEAVYVFNNMHGKDIVSWNSM 308
MY KC GN+E A +F ++ KD+V+W +M
Sbjct: 194 MYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFESLPTKDMVAWTAM 253
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+ G+AQ+ A++ F+ M K ++ D +T G IS+C G + K G
Sbjct: 254 VTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGY 313
Query: 369 KPELDHY---SCVVDLLGRAGLLEEARDFIKQM 398
P DH S ++D+ + G +EEA + M
Sbjct: 314 SPS-DHVVIGSALIDMYSKCGNVEEAVNVFVSM 345
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 209/366 (57%), Gaps = 22/366 (6%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+++G I N V ++ +Y+K I A +F+E P + VV+W A+I+ + Q + +
Sbjct: 337 VKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAI 396
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
L++ M + PN T T+ILSAC G+L G+ H I V+ +L+ MY
Sbjct: 397 SLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMY 456
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL 341
KCGN+ EA +F++M K+ V+WN+MI GY HG A+ L+ EM+ P A+TFL
Sbjct: 457 AKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFL 516
Query: 342 GVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPI 400
V+ +C H GLV EG+ F +M K+ ++P ++HY+C+VD+LGR+G LE+A +FIK+MP+
Sbjct: 517 SVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPV 576
Query: 401 YPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARV 443
P +W A+E L+P +V L+N+Y+ R + +AA +
Sbjct: 577 EPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASI 636
Query: 444 RKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY---- 499
R+++K + L +PGC+ IE+ + F + D+S++ ++I L+ L +M+ +GY
Sbjct: 637 RQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAET 696
Query: 500 VPEVHE 505
VP +H+
Sbjct: 697 VPALHD 702
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 144/288 (50%), Gaps = 1/288 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + ++ + ++VD+S ++ + + + ++ G QCLA++ GF YV + LI+L
Sbjct: 194 IQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISL 253
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
YSKC + A +F + +++++ A+I+ F + ++L+R + S + T
Sbjct: 254 YSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTI 313
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
++ + G L S H ++ G V+ + ++Y K ++ A ++F+
Sbjct: 314 VGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPE 373
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K +V+WN+MI+GY Q+G AI LF+EMMK P+A+T ++S+C G + GK
Sbjct: 374 KTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWV 433
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ L+P + + +VD+ + G + EA M N V W
Sbjct: 434 HHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTW 480
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 4/226 (1%)
Query: 120 ISMHHDLHRE-RLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLIT 178
IS++ L R L D + AV +C + +++ +I G+ +NV+VGS+L+
Sbjct: 95 ISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHL---MLLHAHSIIDGYGSNVFVGSALVD 151
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
LY K ++ A KVF+ MP R+ V W +I + D ++L+R M + + T
Sbjct: 152 LYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSST 211
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
T++L A L G C +++GF V LIS+Y KCG+V A +F ++
Sbjct: 212 VTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRIN 271
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
D++++N+MI+G+ +G ++ LF E++ + + T +G+I
Sbjct: 272 RPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLI 317
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E IS+ ++ + +A ++T +++C ++ G L N+YV ++L
Sbjct: 393 ETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTAL 452
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y+KC I +A+++F+ M +N V+W +I + L+LY M + P+
Sbjct: 453 VDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSA 512
Query: 237 FTFTSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
TF S+L AC+ +G +G+G H + I+ ++ + + G +E+A+
Sbjct: 513 VTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIK 572
Query: 296 NM 297
M
Sbjct: 573 KM 574
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 205/373 (54%), Gaps = 19/373 (5%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM-PVRN 200
+ +C + G CL ++ GF VYV S+L+ +Y+KC I DA F ++ V +
Sbjct: 333 LNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDD 392
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
VV WTA+I Q + + L LY M + P+ T TS+L AC AL G+ H
Sbjct: 393 VVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHA 452
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
Q ++ F V +L +MY KCGN+E+++ VF M +D++SWNS+I+ ++QHG
Sbjct: 453 QILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSD 512
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVV 379
A+D+FEEM + PD ITF+ ++S+C H GLV+ G YF +M K + L P LDHY+C+V
Sbjct: 513 ALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMV 572
Query: 380 DLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAA 422
D+L RAG L+EA+DFI + I +W A E + L E ++
Sbjct: 573 DILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSS 632
Query: 423 THVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSE 482
++ L+N+YA R W+ RVR LM+ +G+ + GCSW+E+ N V+ F ++ +
Sbjct: 633 AYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVHVFVVGEQQHPEAEN 692
Query: 483 ILPVLDFLVDQMK 495
I L L MK
Sbjct: 693 INVELIRLAKHMK 705
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 134/242 (55%), Gaps = 1/242 (0%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM- 227
NV+V ++L+ +Y K + DA +VF+ M RN VSW A+++ +A + EL+R+M
Sbjct: 157 NVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLML 216
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
+ LE N+F T++LSA + L G H ++ G ++ V NSL++MY K +
Sbjct: 217 QKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECM 276
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ A+ VF + ++ ++W++MI GYAQ+G A A +F +M P TF+GV+++C
Sbjct: 277 DAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNAC 336
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G + GK M K G + ++ S +VD+ + G + +A+D Q+ + V+W
Sbjct: 337 SDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLW 396
Query: 408 EA 409
A
Sbjct: 397 TA 398
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 138/265 (52%), Gaps = 2/265 (0%)
Query: 137 FLSTAVTSCGSTR-NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
F++TAV S S + G L ++ G + V V +SL+T+Y+K + A +VF
Sbjct: 226 FVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGS 285
Query: 196 MPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
RN ++W+A+I +AQ + + ++ M +S P +FTF +L+AC+ GAL G
Sbjct: 286 SKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVG 345
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYAQ 314
+ HC +++GF + + V ++L+ MY KCG + +A F+ ++ D+V W +MI G+ Q
Sbjct: 346 KQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQ 405
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+G A+ L+ M KQ + P +T V+ +C ++ GK + K
Sbjct: 406 NGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSV 465
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMP 399
+ + + + G LE++ ++MP
Sbjct: 466 GTALSTMYSKCGNLEDSMVVFRRMP 490
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 20/225 (8%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + M H E L+ AS S R R G A+++G ++ V +S
Sbjct: 5 VPRALRMSHAQFIEHLRCAAS----------SDRTPRTGEALHGWALKSGAASHAPVSNS 54
Query: 176 LITLY-SKCRVIID-AYKVFEEMP--VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS- 230
LIT Y S R ++ AY VF ++P +R+V SW +++ ++ V L +R M +S
Sbjct: 55 LITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLNPLSRHHPVS-ALSHFRSMMSSP 113
Query: 231 ---MLEPNDFTFTSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGN 286
+ P+ F +A S + G A C+ + + V+ +L++MYCK G
Sbjct: 114 EAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGA 173
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
V +A VF+ M ++ VSW +M++GYA + A +LF M+++
Sbjct: 174 VSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQK 218
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+++ + +C + G ++ F VG++L T+YSKC + D+ VF MP
Sbjct: 431 VTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMP 490
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
R+V+SW +II+ F+Q + L+++ M+ P+ TF ++LSAC+ G + +G
Sbjct: 491 DRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRG 548
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGN--VEEAVYVFNNMHG--KDIVSWNSMIA 310
G + H ++ G S+ V+NSLI+ YC + A VF ++ +D+ SWNS++
Sbjct: 33 GEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLN 92
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAI 338
++H V A+ F MM P+A+
Sbjct: 93 PLSRHH-PVSALSHFRSMMS---SPEAV 116
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 203/348 (58%), Gaps = 22/348 (6%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+++I+ +S+C ++ A + F+EM R+ +SW+A+I + QE LE++ M+ +
Sbjct: 241 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 300
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P F S+LSAC GAL QGR H R + SL+ MY KCG ++ A V
Sbjct: 301 PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEV 360
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLV 353
F M K++ SWN+MI G A HG A AIDLF +M + P+ ITF+GV+++C HGGLV
Sbjct: 361 FEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLV 417
Query: 354 EEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--- 409
++G F+SM K +G++P+++HY C+VDLLGRAGLL EA + +P P +W A
Sbjct: 418 QKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLG 477
Query: 410 --------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTN 455
+ L LEP+ + + L+N+YA W++ VRKLMK++G+KT
Sbjct: 478 ACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTT 537
Query: 456 PGCSWIEI-MNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
PG S I++ V++F D S+ ++ +I +LD + ++++ GY P+
Sbjct: 538 PGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPD 585
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 13/247 (5%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRV-----IIDAYKVFEEMPVRNVVSWTAIIAAFA 212
L +RTG + + Y+ SL+ Y+ + +VF+ + NV W +I
Sbjct: 55 HALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCI 114
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ + + LY M + PN +T+ ++L AC+ SG + +G H ++ G
Sbjct: 115 ENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGH 174
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
+ +S I MY G + EA + ++ G+ D V WN+MI GY + G A +LFE M +
Sbjct: 175 ILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDR 234
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ T+ +IS G+VE + +FD M + + E+ +S ++D + G EA
Sbjct: 235 SMIS---TWNAMISGFSRCGMVEVAREFFDEMKE---RDEIS-WSAMIDGYIQEGCFMEA 287
Query: 392 RDFIKQM 398
+ QM
Sbjct: 288 LEIFHQM 294
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 121/296 (40%), Gaps = 70/296 (23%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVR-N 200
+ +C + + G ++ G + ++ SS I +Y+ +++A ++ ++ +
Sbjct: 145 LKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVD 204
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
V W A+I + + +V+ EL+ M +
Sbjct: 205 AVCWNAMIDGYLRFGEVEAARELFEGMPDR------------------------------ 234
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVR 320
S I N++IS + +CG VE A F+ M +D +SW++MI GY Q G +
Sbjct: 235 --------SMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFME 286
Query: 321 AIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK-------------------VYFD 361
A+++F +M K++++P V+S+C + G +++G+ D
Sbjct: 287 ALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVD 346
Query: 362 SMAKHGL------------KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
AK G E+ ++ ++ L G E+A D +M IYPN +
Sbjct: 347 MYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDIYPNEI 402
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + H + +E+++ L + +++C + + G A R + +G+SL+ +
Sbjct: 288 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDM 347
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC I A++VFE+M + V SW A+I A + + ++L+ M + PN+ TF
Sbjct: 348 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITF 404
Query: 240 TSILSACTGSGALGQGRSA-HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
+L+AC G + +G + + G I+ ++ + + G + EA V +++
Sbjct: 405 VGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP 464
Query: 299 GKDIVS-WNSMIAGYAQHG 316
+ + W +++ +HG
Sbjct: 465 TEPTPAVWGALLGACRKHG 483
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 244 SACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG-----NVEEAVYVFNNMH 298
+ CT S L + AH +R G +A SL+ Y + E ++ VF+ +
Sbjct: 42 TQCTTS--LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVR 99
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
++ WN MI ++ +AI L+ EM+ +P+ T+ V+ +C G+V EG
Sbjct: 100 KPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQ 159
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ KHGL + S + + G L EAR + +AV W A
Sbjct: 160 VHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNA 210
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 210/378 (55%), Gaps = 18/378 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
++ + + ++ + D + L+ ++S + GG ++ + F ++Y+ S L
Sbjct: 372 KEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGL 431
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YSKC + A ++F+ + ++V W +++A + ++ MR + P+
Sbjct: 432 IGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQ 491
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
F++ ++LS C +L QGR H Q R G+ + V ++LI MY KCG+V+ A +VF+
Sbjct: 492 FSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDM 551
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEG 356
M GK+ V+WN MI GYAQ+G A+ L+E+M+ KPD ITF+ V+++C H GLV+ G
Sbjct: 552 MLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTG 611
Query: 357 KVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE------- 408
F+SM + HG++P +DHY+C++D LGRAG L EA I +MP + +IWE
Sbjct: 612 IKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCR 671
Query: 409 ----------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGC 458
AAE L+P+ +A +V LAN+Y+ + WD A VR+LM + +PG
Sbjct: 672 VYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGY 731
Query: 459 SWIEIMNVVYRFRAEDKS 476
SWIE N + F +D
Sbjct: 732 SWIEHKNGMQAFMVDDNG 749
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 201/410 (49%), Gaps = 41/410 (10%)
Query: 36 LKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTD----SKHLDSQKFNHD 91
L Q K H A +++ R+R S T + RLI+ + + + S+ L Q D
Sbjct: 11 LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRD 70
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVT---SCGST 148
N+ G+ +L D V+ E ER V + L +A+T +CG+
Sbjct: 71 IYTWNAILGAYCKASELEDAHVLFAEM---------PERNIVSWNTLISALTRNGACGAL 121
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
++ G ++I+ G N+YVG++L+ +Y+KCR I DA + F ++P N VS+TA++
Sbjct: 122 VDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMM 181
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT--GSGALG------------Q 254
A QV+ L+R+M + + + + +S+L C+ G G G
Sbjct: 182 GGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVH 241
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+ HC TI+ GF S + + NSL+ MY K GN++ A +F NM +VSWN MIAGY Q
Sbjct: 242 GQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQ 301
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
+ +AI+ + M +PD IT++ ++ +C G +E G+ FD M+ P L
Sbjct: 302 KSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS----SPSLSS 357
Query: 375 YSCVVDLLGRAGLLEEARDFIKQM---PIYPN----AVIWEAAESRLLLE 417
++ ++ + +EA ++M ++P+ A+I + +LLE
Sbjct: 358 WNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLE 407
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 138/289 (47%), Gaps = 24/289 (8%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
++ ++L++ + +C + G +R+ + ++ + LI Y+KC I +
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
++F++MP R++ +W AI+ A+ + + LE ++ M E N ++ +++SA T +G
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASE----LEDAHVLFAEMPERNIVSWNTLISALTRNG 116
Query: 251 ALGQ------GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVS 304
A G GR H +I++G + I V N+L+ MY KC + +A+ F ++ + VS
Sbjct: 117 ACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVS 176
Query: 305 WNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE---------- 354
+ +M+ G A A LF M++ R+ D+++ V+ C GG E
Sbjct: 177 FTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVL 236
Query: 355 ----EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
G+ KHG + +L + ++D+ + G ++ A MP
Sbjct: 237 SSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMP 285
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 25/324 (7%)
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
++F+ M ++ SW I++ ++Q ++L+R M+ + P+ T ILS+ G
Sbjct: 345 QMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMM 404
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
L GR H + + F + I +A+ LI MY KCG VE A +F+ + DIV WNSM+A
Sbjct: 405 LLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMA 464
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKP 370
G + + L A F++M ++ + P ++ V+S C + +G+ +A+ G
Sbjct: 465 GLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMN 524
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPECAATHVQLANL 430
+ S ++D+ + G ++ AR ++ M + N V W ++ +
Sbjct: 525 DAFVGSALIDMYSKCGDVDAAR-WVFDMMLGKNTVTWN-----------------EMIHG 566
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKS----NTRLSE--IL 484
YA C D+A + + M G K + G +++ ++ D N+ E +
Sbjct: 567 YAQNGCGDEAVLLYEDMIGSGEKPD-GITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVE 625
Query: 485 PVLDFLVDQMKTLGYVPEVHEEKV 508
P++D + +LG +HE +V
Sbjct: 626 PLVDHYTCIIDSLGRAGRLHEAEV 649
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 135/308 (43%), Gaps = 60/308 (19%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRG----------------GAPYQCLAIRTGFIANVY 171
R R+ VD+ LS+ + C +R G G CL I+ GF ++++
Sbjct: 202 RNRIHVDSVSLSSVLGVC--SRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLH 259
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
+ +SL+ +Y+K + A +F MP +VVSW +IA + Q+ Q +E + M+
Sbjct: 260 LNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHG 319
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
EP++ T+ ++L AC SG + GR
Sbjct: 320 FEPDEITYVNMLVACIKSGDIEAGRQ---------------------------------- 345
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGG 351
+F+ M + SWN++++GY+Q+ A+ LF EM + V PD T ++SS
Sbjct: 346 -MFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMM 404
Query: 352 LVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR---DFIKQMPIYPNAVIWE 408
L+E G+ K + ++ S ++ + + G +E A+ D I ++ I V W
Sbjct: 405 LLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDI----VCWN 460
Query: 409 AAESRLLL 416
+ + L L
Sbjct: 461 SMMAGLSL 468
>gi|296088921|emb|CBI38481.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 218/396 (55%), Gaps = 18/396 (4%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
L R L+V+ + + + C + + G I G+ + Y+ + L+ L++K
Sbjct: 82 LCRTGLQVEPATYALLLQECIFKKEFKTGRRIHAQMIVVGYYPDEYLKTKLLILHAKTGD 141
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ ++ +F+++ ++++SW A+IA + Q+ + L LY MR S L P+ +TF S+ A
Sbjct: 142 LDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLTPDQYTFASVFRA 201
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C L +G+ AHC I+ + V ++L+ MY KC ++ + VFN +++++W
Sbjct: 202 CATLATLEKGKQAHCVMIKSQIKENVVVNSALMDMYFKCSSLYDGHRVFNKSLNRNVITW 261
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
++I+GY QHG + F +M + +P+ +TFL VIS+C HGGLV EG YF SM +
Sbjct: 262 TALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTFLAVISACSHGGLVNEGWEYFMSMTR 321
Query: 366 -HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE---------------- 408
+G++P HY+ +VDLLGRAG L EA +F++ P ++VIW
Sbjct: 322 DYGIQPRGQHYAAMVDLLGRAGRLHEAFEFVQNSPCGEHSVIWGALLGACRVHGNIDMLR 381
Query: 409 -AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVV 467
AA+ LEPE A +V L+N YA WD A VR +M++ G++ +PG S IE+ V
Sbjct: 382 FAAKKYFDLEPENAGKYVVLSNAYATFGLWDNVAEVRGVMRESGMRKDPGYSRIEVQREV 441
Query: 468 YRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
+ F DKS+ + +I V+ + +K GYVP++
Sbjct: 442 HFFLMGDKSHKQTEQIYEVIKEVTCILKDAGYVPDL 477
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ ++++ ++ + L D ++ +C + + G C+ I++ NV V S+L
Sbjct: 174 EEGLNLYDEMRQSGLTPDQYTFASVFRACATLATLEKGKQAHCVMIKSQIKENVVVNSAL 233
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+ +Y KC + D ++VF + RNV++WTA+I+ + Q +V L + M+ PN
Sbjct: 234 MDMYFKCSSLYDGHRVFNKSLNRNVITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNY 293
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCGNVEEAV-YVF 294
TF +++SAC+ G + +G R G Q +++ + + G + EA +V
Sbjct: 294 VTFLAVISACSHGGLVNEGWEYFMSMTRDYGIQPRGQHYAAMVDLLGRAGRLHEAFEFVQ 353
Query: 295 NNMHGKDIVSWNSMIAGYAQHG 316
N+ G+ V W +++ HG
Sbjct: 354 NSPCGEHSVIWGALLGACRVHG 375
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+ P RN + +V +E ++ + L+ T+ +L C
Sbjct: 51 FQVQPPRNSFHLDETLKGLCFSGRV---MEAVGLLCRTGLQVEPATYALLLQECIFKKEF 107
Query: 253 GQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
GR H Q I +G++ + L+ ++ K G+++ + +F+++ K ++SWN+MIAGY
Sbjct: 108 KTGRRIHAQMIVVGYYPDEYLKTKLLILHAKTGDLDTSHILFDDLSKKSLISWNAMIAGY 167
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q GL ++L++EM + + PD TF V +C +E+GK M K +K +
Sbjct: 168 VQKGLEEEGLNLYDEMRQSGLTPDQYTFASVFRACATLATLEKGKQAHCVMIKSQIKENV 227
Query: 373 DHYSCVVDLLGR-AGLLEEARDFIKQMPIYPNAVIWEA 409
S ++D+ + + L + R F K + N + W A
Sbjct: 228 VVNSALMDMYFKCSSLYDGHRVFNKSLN--RNVITWTA 263
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 221/405 (54%), Gaps = 18/405 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D +K + + + +H + L + +C + G A + GF +YV S
Sbjct: 300 DSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLS 359
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
+++ +Y+KC + DA K FE + +VV WT+II + Q + L LY M+ + P
Sbjct: 360 AVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIP 419
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N+ T S+L AC+ AL QG+ H + I+ GF + + ++L +MY KCG++++ +F
Sbjct: 420 NELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIF 479
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
M +D++SWN+MI+G +Q+G +A++LFE+M+ + +KPD +TF+ ++S+C H GLV+
Sbjct: 480 WRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVD 539
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
G YF M + + P ++HY+C+VD+L RAG L EA++FI+ + +W
Sbjct: 540 RGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGA 599
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A E + L ++ +V L+++Y + + RVR++MK +G+ P
Sbjct: 600 CKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEP 659
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
GCSWIE+ +V+ F D + ++ EI L+ L M GY P
Sbjct: 660 GCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLMIDEGYQP 704
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 1/274 (0%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+A L+ ++ + ++ G +A++TG +VYVGSSL+ +Y K + DA K+F
Sbjct: 117 NAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLF 176
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ MP RN VSW +I+ +A D +E++ +MR N+F TS+LSA T +
Sbjct: 177 DRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVY 236
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
GR H I+ G + + VAN+L++MY KCG++++AV F K+ ++W++M+ GYA
Sbjct: 237 TGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYA 296
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q G + +A+ LF +M V P T +GVI++C V EGK K G +L
Sbjct: 297 QGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLY 356
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
S VVD+ + G L +AR + + P+ V+W
Sbjct: 357 VLSAVVDMYAKCGSLADARKGFECVQ-QPDVVLW 389
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 171/333 (51%), Gaps = 14/333 (4%)
Query: 95 TNSTFGSSNVFDQLLDTPVVDVEKLISMH------------HDLHRERLKVDASF-LSTA 141
T F + +FD++ + V +IS + +L R ++ F L++
Sbjct: 166 TGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSV 225
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
+++ S + G LAI+ G +A V V ++L+T+Y+KC + DA + FE +N
Sbjct: 226 LSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNS 285
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
++W+A++ +AQ D L+L+ M +S + P++FT +++AC+ A+ +G+ H
Sbjct: 286 ITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSF 345
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
++GF + V ++++ MY KCG++ +A F + D+V W S+I GY Q+G
Sbjct: 346 AFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGG 405
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
++L+ +M +RV P+ +T V+ +C +++GK + K+G K E+ S + +
Sbjct: 406 LNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAM 465
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWEAAESRL 414
+ G L++ +MP + + W A S L
Sbjct: 466 YTKCGSLDDGYLIFWRMP-SRDVISWNAMISGL 497
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 138/272 (50%), Gaps = 9/272 (3%)
Query: 145 CGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV--RNVV 202
C +NI G ++TG I+++YV ++ + LY+K + A +F+ + ++ V
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80
Query: 203 SWTAIIAAFAQE---WQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
SW ++I AF+Q + L+R MMR + + PN T + SA + + G+ A
Sbjct: 81 SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H ++ G + V +SL++MYCK G V +A +F+ M ++ VSW +MI+GYA +A
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
+A+++FE M ++ + V+S+ V G+ K+GL + + +
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANAL 260
Query: 379 VDLLGRAGLLEEA-RDFIKQMPIYPNAVIWEA 409
V + + G L++A R F + N++ W A
Sbjct: 261 VTMYAKCGSLDDAVRTF--EFSGDKNSITWSA 290
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 7/171 (4%)
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN--NMHGK 300
L CT + + +GR+ H + ++ G S I V N+ +++Y K ++ A+ +F+ N + K
Sbjct: 18 LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDK 77
Query: 301 DIVSWNSMIAGYAQHGLAVR---AIDLFEEMMK-QRVKPDAITFLGVISSCRHGGLVEEG 356
D VSWNS+I ++Q+ + AI LF MM+ V P+A T GV S+ + V G
Sbjct: 78 DDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAG 137
Query: 357 KVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
K K G ++ S ++++ + G + +AR +MP N V W
Sbjct: 138 KQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMP-ERNTVSW 187
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 201/359 (55%), Gaps = 18/359 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+A + + +C + G + +R G ++++V +SLI +Y+KC + A VF
Sbjct: 462 NAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF 521
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
++ VS+ +I +++ L L+ MR +P+ +F ++SAC AL
Sbjct: 522 NT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALK 580
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
QG+ H +R +S++ V+NSL+ Y KCG ++ A +FN + KD+ SWN+MI GY
Sbjct: 581 QGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYG 640
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
G AI +FE M V+ D ++++ V+S+C HGGLVE G YF M L+P
Sbjct: 641 MIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEM 700
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLL 416
HY+C+VDLLGRAG +EEA I+Q+PI P+A IW AAE L
Sbjct: 701 HYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFEL 760
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
+P+ ++ L+N+YA WD+A ++R+LMK +G K NPGCSW++I + V+ F AE++
Sbjct: 761 KPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 819
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 125/236 (52%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C +++ G + V ++L+ Y KC + ++VF E +N VSW +II A + +
Sbjct: 284 HCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRC 343
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
L +RMM ++ +PN T +SIL G+ H ++RMG + I +ANSL
Sbjct: 344 WDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSL 403
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
I MY K G+ EA +F+N+ ++IVSWN+MIA YA + L + AI +M + P+A
Sbjct: 404 IDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNA 463
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+TF V+ +C G + GK + GL +L + ++D+ + G L AR+
Sbjct: 464 VTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARN 519
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 136/256 (53%), Gaps = 2/256 (0%)
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
+ G ++R G ++++ +SLI +Y+K +A +F + RN+VSW A+IA +
Sbjct: 379 KAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANY 438
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
A + M+ + PN TFT++L AC G LG G+ H +R+G S +
Sbjct: 439 ALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDL 498
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
V+NSLI MY KCG + A VFN KD VS+N +I GY++ +++++LF EM
Sbjct: 499 FVSNSLIDMYAKCGCLHSARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMRLL 557
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
KPD ++F+GVIS+C + +++GK ++ L L + ++D + G ++ A
Sbjct: 558 GKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIA 617
Query: 392 RDFIKQMPIYPNAVIW 407
Q+ ++ + W
Sbjct: 618 CRLFNQI-LFKDVASW 632
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 178/396 (44%), Gaps = 19/396 (4%)
Query: 30 SFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQKFN 89
+ CS K++ + +K +H AL +L+ PR+ + LI ++ + FN
Sbjct: 62 TLCS-KVQSLLQTKQVH-ALGILNGFLPRS-----VSLCASLILNYAKFQHPGSFCSLFN 114
Query: 90 HDFTGTNSTFGSSNVFDQLLDTPVVDVEKLI---SMHHDLHRERLKVDASFLSTAVTSCG 146
F + F +++ L+ + ++ + R +++D + C
Sbjct: 115 QTFQNCRTAF----LWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCS 170
Query: 147 STRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+ +I G + + GF +VYVG++L+ LY C + DA ++F+EMP R+VVSW
Sbjct: 171 DSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNT 230
Query: 207 IIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
II + Y M+ S+++PN + S+L R HC ++++
Sbjct: 231 IIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKV 290
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLF 325
G S + N+L+ Y KCG+V+ VFN K+ VSWNS+I G A G A++ F
Sbjct: 291 GLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAF 350
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
M+ +P+++T ++ + GK + G + ++ + ++D+ ++
Sbjct: 351 RMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKS 410
Query: 386 GLLEEARDFIKQMP----IYPNAVIWEAAESRLLLE 417
G EA + + NA+I A +RL LE
Sbjct: 411 GHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLE 446
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 215/388 (55%), Gaps = 23/388 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGF---IANVYVGSSLITLYSKCRVIIDAY 190
D ++ + +CG+ IRGG I GF I N+ + S+++ LY+KC + +A
Sbjct: 205 DEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI-IASAIVDLYAKCGYLFEAQ 263
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
KVF+ + +N++SW+A+I FAQE + ++L+R +R S+ + F + ++
Sbjct: 264 KVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLA 323
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+ QG+ HC +++ I VANS+I MY KCG EEA +F+ M +++VSW MI
Sbjct: 324 LVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMIT 383
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLK 369
GY +HGL +AI LF M ++ D + +L ++S+C H GL+ E + YF + H +K
Sbjct: 384 GYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMK 443
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAES 412
P ++HY+C+VD+LGRAG L+EA++ I+ M + PN IW E E
Sbjct: 444 PNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEI 503
Query: 413 RLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRA 472
++ + +V ++N+YA W + RVRKL+K KGLK G SW+EI ++ F
Sbjct: 504 LFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYG 563
Query: 473 EDKSNTRLSEILPVLDFLVDQMK-TLGY 499
D ++ +I +L + ++K +GY
Sbjct: 564 GDDTHPLTEKIHEMLKEMERRVKEEVGY 591
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 133/274 (48%), Gaps = 3/274 (1%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ + +C G A+ GF ++ + + LI +Y KC + A VF+ M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
RNVVSWTA++ + QE L L M S ++PN+FTF++ L AC G + G
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H ++ GF V N+ I MY KCG + A VFN M +++VSWN+MIAG+ G
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY-- 375
+++ LF+ M Q PD TF + +C G + G S+ G + +
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
S +VDL + G L EA+ ++ N + W A
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIE-QKNLISWSA 279
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 208/369 (56%), Gaps = 21/369 (5%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP-VRNVVSWTAIIAAFA 212
G ++ G + + V ++LI+ Y+K + +F M R+ +SW ++I+ +
Sbjct: 602 GKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYI 661
Query: 213 QEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ ++ +M +S + TF+ IL+AC AL +G H IR S +
Sbjct: 662 YNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVV 721
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V ++L+ MY KCG V+ A +FN+M ++ SWNSMI+GYA+HGL +AI++FEEM++ R
Sbjct: 722 VESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSR 781
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
PD +TF+ V+S+C H GLVE G YF+ M HG+ P+++HYSCV+DLLGRAG +++ +
Sbjct: 782 ESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIK 841
Query: 393 DFIKQMPIYPNAVIW--------------------EAAESRLLLEPECAATHVQLANLYA 432
++I++MPI PNA+IW EA+ L +EP+ +V +N +A
Sbjct: 842 EYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHA 901
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
W+ A+ R M+ K G SW+ + + V+ F A D+S+ EI L+FL+
Sbjct: 902 ATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQ 961
Query: 493 QMKTLGYVP 501
++ GYVP
Sbjct: 962 NIRNAGYVP 970
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 2/265 (0%)
Query: 147 STRNIRGGAPYQCLAIRTGFI-ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWT 205
S +R G +RTG + V + L+ +Y+KC I A K+F+ M + +SW
Sbjct: 391 SEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWN 450
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRM 265
II+A Q + + Y +MR S + P++F S LS+C G L G+ HC ++
Sbjct: 451 TIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKW 510
Query: 266 GFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI-DL 324
G V+N L+ MY +CG + + VFN+M D VSWN+M+ A + I +
Sbjct: 511 GLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKV 570
Query: 325 FEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGR 384
F MM+ + P+ +TF+ ++++ ++E GK ++ KHG+ + + ++ +
Sbjct: 571 FNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAK 630
Query: 385 AGLLEEARDFIKQMPIYPNAVIWEA 409
+G + M +A+ W +
Sbjct: 631 SGDMGSCEHLFTNMSDRRDAISWNS 655
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 3/280 (1%)
Query: 122 MHHDLHRERLKVDASF-LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY 180
MH+ L R+ ++F L ++++SC + + G C A++ G + V + L+ +Y
Sbjct: 467 MHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMY 526
Query: 181 SKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFA-QEWQVDMCLELYRMMRNSMLEPNDFTF 239
+C + D +KVF M + VSW ++ A + + ++++ M L PN TF
Sbjct: 527 GECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTF 586
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
++L+A + L G+ H ++ G V N+LIS Y K G++ ++F NM
Sbjct: 587 INLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSD 646
Query: 300 -KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+D +SWNSMI+GY +G A+D M+ D TF ++++C +E G
Sbjct: 647 RRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGME 706
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ L+ ++ S +VD+ + G ++ A M
Sbjct: 707 LHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 746
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
I+ G ++++ + L+ Y+K + A +VF+EMP RN VSWT +++ + +
Sbjct: 88 IKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAF 147
Query: 222 ELYRMMRNSM---LEPNDFTFTSILSACTGSGA--LGQGRSAHCQTIRMGFFSYIQVANS 276
++R M + P FTF ++L AC G LG H + + S V N+
Sbjct: 148 RVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNA 207
Query: 277 LISMY--CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ--- 331
LISMY C G A VF+ +D+++WN++++ YA+ G LF++M +
Sbjct: 208 LISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSR 267
Query: 332 -RVKPDAITFLGVIS----SCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+++P TF +I+ S ++++ V+ + K G +L S +V R G
Sbjct: 268 IQLRPTEHTFGSLITAASLSSGSSAVLDQVLVW---VLKSGCSSDLYVGSALVSAFARHG 324
Query: 387 LLEEARDF 394
L +EA+D
Sbjct: 325 LTDEAKDI 332
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 154/332 (46%), Gaps = 37/332 (11%)
Query: 100 GSSNVFDQLLDTPVVDVEKLISMH--HDLHRERLKVDASFLSTAVTSCGST--------R 149
+S VFD++ + V L+S + H + E +V + L C T R
Sbjct: 114 AASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLR 173
Query: 150 NIRGGAP--------YQCLAIRTGFIANVYVGSSLITLYSKCRV--IIDAYKVFEEMPVR 199
+ G P L +T + +N V ++LI++Y C V I A +VF+ P+R
Sbjct: 174 ACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIR 233
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNS----MLEPNDFTFTSILSACTGSG----A 251
++++W A+++ +A++ V L++ M+ L P + TF S+++A + S
Sbjct: 234 DLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAV 293
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L Q ++ G S + V ++L+S + + G +EA +F ++ K+ V+ N +I G
Sbjct: 294 LDQ---VLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVG 350
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEE----GKVYFDSMAKHG 367
+ + A+ +F + V +A T++ ++S+ + EE G+V M + G
Sbjct: 351 LVRQDFSEEAVKIFVG-TRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTG 409
Query: 368 LKP-ELDHYSCVVDLLGRAGLLEEARDFIKQM 398
L ++ + +V++ + G +E A + M
Sbjct: 410 LTDLKIAVSNGLVNMYAKCGAIESASKIFQLM 441
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
H + I+ G + + N L++ Y K + A VF+ M ++ VSW +++GY HG+A
Sbjct: 84 HVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIA 143
Query: 319 VRAIDLFEEMMKQ---RVKPDAITFLGVISSCRHGG 351
A +F M+++ +P + TF ++ +C+ GG
Sbjct: 144 EEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGG 179
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 215/400 (53%), Gaps = 19/400 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
++M+ + + D + + +C ST N R GA +R +V +SL+++
Sbjct: 193 LAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSM 252
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+K + A +VF MP RN V+W+A+I+ FAQ + L+L+R ++ L+P +
Sbjct: 253 YAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWAL 312
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
S L AC G L G+S H +R + I + +++ MY KCG++E A +FN +
Sbjct: 313 VSALLACASVGFLKLGKSIHGFILRRLEWQCI-LGTAVLDMYSKCGSLESARKLFNKLSS 371
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+D+V WN++IA HG A+ LF+E+ + +KPD TF ++S+ H GLVEEGK +
Sbjct: 372 RDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFW 431
Query: 360 FDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
FD M K G++P HY C+VDLL R+GL+EEA D + M P IW
Sbjct: 432 FDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNK 491
Query: 408 ------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
A+ L L PE ++NLYA + WD+ +RKLMKD G K PG S I
Sbjct: 492 KLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLI 551
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
E+ + F ED+S+ + EIL ++ L +M+ LGYVP
Sbjct: 552 EVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVP 591
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 143/281 (50%), Gaps = 12/281 (4%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+++ + +T+C ++ + A G+ +V+V S+L+ LYS+C + +A +VF
Sbjct: 106 NSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVF 165
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
+ MP ++ V+W+ ++A F + L +Y MR + ++ ++ AC +G
Sbjct: 166 DGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNAR 225
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
G S H + +R + SL+SMY K G+++ A VF M ++ V+W+++I+G+A
Sbjct: 226 IGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFA 285
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
Q+G AV A+DLF E+ ++P + + + +C G ++ GK + HG
Sbjct: 286 QNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGK------SIHGFILRRL 339
Query: 374 HYSC-----VVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ C V+D+ + G LE AR ++ + V+W A
Sbjct: 340 EWQCILGTAVLDMYSKCGSLESARKLFNKLS-SRDLVLWNA 379
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 204 WTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTI 263
W +++A ++ L ++R + +S PN TFT L+AC G L S +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPSSA-RPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 264 RMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAID 323
G+ + V ++L+ +Y +CG +EEA+ VF+ M KD V+W++M+AG+ G V A+
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
++ M + V D + +GVI +C G G + +H ++ ++ + +V +
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254
Query: 384 RAGLLEEARDFIKQMPIYPNAVIWEA 409
+ G L+ A + MP Y N V W A
Sbjct: 255 KNGHLDVACQVFRMMP-YRNDVTWSA 279
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 227/444 (51%), Gaps = 53/444 (11%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ ERL + + A CGS + G + AI+ G N++V ++LI +Y
Sbjct: 93 IREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDF 152
Query: 186 IIDAYKVFE-------------------------------EMPVRNVVSWTAIIAAFAQE 214
++DA KVF+ EMP ++VVSWT +I+ Q
Sbjct: 153 VVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 212
Query: 215 WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
L+++ M + PN++T S L+AC AL QGR H + ++
Sbjct: 213 GYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLL 272
Query: 275 NSLISMYCKCGNVEEAVYVFNNMH--GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
LI MY KCG +E A +FN+ + + WN+MI G+A HG + AI++FE+M ++
Sbjct: 273 AGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEK 332
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEA 391
V P+ +TF+ ++++C HG VEEG+ YF+SMA H +KPEL+HY C+VDLLGRAG L+EA
Sbjct: 333 VSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEA 392
Query: 392 RDFIKQMPIYPNAVIWEAAESRLL-----------------LEPECAATHVQLANLYAGV 434
+ I M + P+ IW A S L+P HV LAN+Y+
Sbjct: 393 EEIISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLT 452
Query: 435 RCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
W++A +R+ + + G K PGCS IE+ + ++F D+S+ + ++ LD ++ ++
Sbjct: 453 GNWNEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKL 512
Query: 495 KTLGYVPEVHEE--KVDDASHKRT 516
K GY+PE E +DD + T
Sbjct: 513 KIAGYIPESGEVLLDIDDNEDRET 536
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID-AYKVFEEMPVRN 200
++SC S R I+ I TG I + + L+ S I A+ VF+ P +
Sbjct: 8 LSSCKSFRQIK---QVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPD 64
Query: 201 VVSWTAIIA--AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+ + II AF+ D + ++R L PN ++F C + +G
Sbjct: 65 LFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQV 124
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
I++G + + V N+LI MY V +A VF+ +D+ SWN M++GYA+ G
Sbjct: 125 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 184
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCV 378
A LF+EM ++ D +++ +IS C G E F +M G+ P + Y+
Sbjct: 185 DEARQLFDEMPEK----DVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSP--NEYTLA 238
Query: 379 VDLLGRAGLLEEARDFIKQMPIY 401
L A L+ A D + M +Y
Sbjct: 239 SSLAACANLV--ALDQGRWMHVY 259
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 231/437 (52%), Gaps = 35/437 (8%)
Query: 91 DFTGTNSTFG-SSNVFDQLLDTPVVD-------------VEKLISMHHDLHRERLKVDAS 136
DF N F + VFD L VV +E+ + + D+ E + +
Sbjct: 256 DFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEF 315
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
LS + +CGS I G C AI+ I ++ V ++L+++Y + ++ + + ++
Sbjct: 316 ALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI 372
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
++VSWT I+A Q + + L M + PN + F+S+LS+C +L QG
Sbjct: 373 ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGM 432
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
HC +++G S I N+LI+MY KCG + A F+ MH D+ SWNS+I G+AQHG
Sbjct: 433 QFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHG 492
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHY 375
A +A+++F +M +KPD TFLGV+ C H G+VEEG+++F M ++ P HY
Sbjct: 493 DANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHY 552
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEP 418
+C++D+LGR G +EA I MP P+A+IW+ AA+ + L
Sbjct: 553 ACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSD 612
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
+A++V ++N+YA W+ A +VR+ M + G+K + GCSWIEI N V+ F + D S+
Sbjct: 613 RDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHP 672
Query: 479 RLSEILPVLDFLVDQMK 495
I +L LV M+
Sbjct: 673 NSDSIYQMLGELVAVMQ 689
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 153/298 (51%), Gaps = 10/298 (3%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E ++M D+ + + + A+ +C +R G LA+R GF + ++GS L
Sbjct: 96 EAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCL 155
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YS+C + A +VF+ M +VV +T++I+AF + + ++ E M L+PN+
Sbjct: 156 IEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNE 215
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTI-RMGFFSY-IQVANSLISMYCKCGNVEEAVYVF 294
T T+IL+AC LGQ H I ++G S + + +LI Y + G + A VF
Sbjct: 216 HTMTTILTACP--RVLGQ--QIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVF 271
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+++H K++VSW SM+ Y + G A+ +F +M+ + V P+ V+ +C GL
Sbjct: 272 DSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL-- 329
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
G+ S KH L ++ + ++ + GR GL+EE + ++ P+ V W A S
Sbjct: 330 -GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE-NPDLVSWTTAIS 385
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA +F+ MP +NVV+WT++++ + + + + L ++ M S + PNDF + L A
Sbjct: 64 LADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVA 123
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C GAL G H +R GF + + LI MY +CG++ A VF+ M D+V +
Sbjct: 124 CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGY 183
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR-------HGGLVEEGKV 358
S+I+ + ++G A + +M+KQ +KP+ T ++++C HG L++ K+
Sbjct: 184 TSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIK--KI 241
Query: 359 YFDSMAKHGLKPELDHYS 376
S + + +D YS
Sbjct: 242 GLRSQSVYSSTALIDFYS 259
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%)
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
K G + +A+ +F+ M K++V+W S+++GY ++G A+ +F +M++ V P+
Sbjct: 60 KSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNA 119
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ +C G + G+ + G + SC++++ R G L A++ +M
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 175
>gi|414591101|tpg|DAA41672.1| TPA: hypothetical protein ZEAMMB73_535355 [Zea mays]
Length = 502
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 246/475 (51%), Gaps = 32/475 (6%)
Query: 55 ISPRTRDSTKTEVHLRLIQDFLQTDSKHLDSQ-----KFNHDFTGTNSTFGSSNVFDQLL 109
+SP + + V RL L TD L S+ + F G S S + ++ LL
Sbjct: 22 LSPGAQLHAQALVGGRLPDTTLDTDLVLLYSRCGALHRAREVFDGMPSP--SMHAYNVLL 79
Query: 110 DTPVVDVE-KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIA 168
D KL+S L L+ D + + +C +R+ G+ A+R G +A
Sbjct: 80 AASPPDAAVKLVS---RLVASGLRPDRYSVPAVLRACAESRDALLGSVLHGFAVRLGLLA 136
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR--M 226
NV V +L+ +Y+K + DA +VF+EMP R+ V+W ++ +A+ + + LEL+R
Sbjct: 137 NVVVSGALLDMYAKTGTLGDAGRVFDEMPERDAVAWNCMVTGYARAGRSEETLELFRKAQ 196
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR-MGFFSYIQVANSLISMYCKCG 285
+ ++ + + S+L+ C G L +GR H + R + S V N+LI MY KCG
Sbjct: 197 IESAGMARDLRAVPSVLNVCADEGQLMKGREIHGRMARCLASSSDTVVGNALIDMYGKCG 256
Query: 286 NVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVIS 345
V+ A VF +M K++VSW+S+I+ Y HG+ A+ ++EEM+ VKP+ +TF+ ++S
Sbjct: 257 QVDGAQAVFASMEEKNVVSWSSLISCYGVHGMGKEALRVYEEMVSVGVKPNCVTFVSILS 316
Query: 346 SCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNA 404
SC H GLV +G+ F+SM K H ++P DHY+C+VDLLGRAG +EEA + +MP+ P A
Sbjct: 317 SCSHSGLVSDGRRIFESMRKVHAVEPTADHYACMVDLLGRAGAIEEAVGLVNEMPMEPGA 376
Query: 405 VIW----------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
+W E A RL LE + A+ +V L +Y + D A +R M
Sbjct: 377 SLWGALLSACAIHNNVDVGEVAAYRLFELEEDNASNYVTLCGIYDAIGRSDSVAGLRSRM 436
Query: 448 KDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
++ G+ PGCSW+ + Y F ++L VL L++ M GY E
Sbjct: 437 RELGMVKTPGCSWVHVKGRAYAFYQGCVPRYLRRQMLRVLGHLLEDMAGSGYENE 491
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 10/276 (3%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
LS + C ++ + GA A+ G + + + + L+ LYS+C + A +VF+ MP
Sbjct: 9 LSALLRRCAASGALSPGAQLHAQALVGGRLPDTTLDTDLVLLYSRCGALHRAREVFDGMP 68
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRS 257
++ ++ ++AA D ++L + S L P+ ++ ++L AC S G
Sbjct: 69 SPSMHAYNVLLAASPP----DAAVKLVSRLVASGLRPDRYSVPAVLRACAESRDALLGSV 124
Query: 258 AHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGL 317
H +R+G + + V+ +L+ MY K G + +A VF+ M +D V+WN M+ GYA+ G
Sbjct: 125 LHGFAVRLGLLANVVVSGALLDMYAKTGTLGDAGRVFDEMPERDAVAWNCMVTGYARAGR 184
Query: 318 AVRAIDLFE--EMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
+ ++LF ++ + D V++ C G + +G+ MA+ L D
Sbjct: 185 SEETLELFRKAQIESAGMARDLRAVPSVLNVCADEGQLMKGREIHGRMARC-LASSSDTV 243
Query: 376 --SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++D+ G+ G ++ A+ M N V W +
Sbjct: 244 VGNALIDMYGKCGQVDGAQAVFASME-EKNVVSWSS 278
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 5/177 (2%)
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
M P+ +++L C SGAL G H Q + G + L+ +Y +CG + A
Sbjct: 1 MTPPSSGRLSALLRRCAASGALSPGAQLHAQALVGGRLPDTTLDTDLVLLYSRCGALHRA 60
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
VF+ M + ++N ++A A+ L ++ ++PD + V+ +C
Sbjct: 61 REVFDGMPSPSMHAYNVLLAASPPDA----AVKLVSRLVASGLRPDRYSVPAVLRACAES 116
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G V + GL + ++D+ + G L +A +MP +AV W
Sbjct: 117 RDALLGSVLHGFAVRLGLLANVVVSGALLDMYAKTGTLGDAGRVFDEMP-ERDAVAW 172
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 141/440 (32%), Positives = 236/440 (53%), Gaps = 40/440 (9%)
Query: 92 FTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNI 151
F G + +G + FD++ + +V +IS + + +R+ + F RN+
Sbjct: 117 FKGGQAVYGFA--FDEMCEKDIVSWNMMISGYGN--NDRVDIARKFFDRM-----PERNV 167
Query: 152 RGGAPYQCLAIRTGFIA--NVYVGSSLITLYSKCRVIIDAYK-----------VFEEMPV 198
C ++ G +A V S + + V++ Y +F++MP+
Sbjct: 168 VSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPM 227
Query: 199 RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSA 258
+N+V+W+ +I +A+ Q LEL+ + ++P++ I+SAC+ G + S
Sbjct: 228 KNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESI 287
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLA 318
+ S ++V SLI MY KCG++E+A+ +F H KD++ +++MIA A HGL
Sbjct: 288 IHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLG 347
Query: 319 VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH-GLKPELDHYSC 377
AI LF++M + +KPD++TFLGV+++C HGGLV+EG+ YF M + G++P HY+C
Sbjct: 348 RDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYAC 407
Query: 378 VVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LEPEC 420
VVDLLGR G LEEA + I+ MPI P++V+W E A + L +EP+
Sbjct: 408 VVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDN 467
Query: 421 AATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRL 480
+ ++ L+N+YA W A+VR +++ ++ N G SWIE+ +VV+ F D S+T
Sbjct: 468 SGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDS 527
Query: 481 SEILPVLDFLVDQMKTLGYV 500
I +L L + MK GY+
Sbjct: 528 DSISLILYLLCEDMKLSGYL 547
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 63/295 (21%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
L I + ++ +V + L+ LYS+ A+KVF+E+ N WT++I + + Q D
Sbjct: 25 LLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDE 84
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACT-------GSGALGQGRSAHCQT---------- 262
L+ MR + +FT +S+L A G G C+
Sbjct: 85 AFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFAFDEMCEKDIVSWNMMIS 144
Query: 263 ---------IRMGFFSYIQVAN-----SLISMYCKCGNVEEAVYVFNNMHGKDIVSWN-- 306
I FF + N S+I Y K G++ EA +F++M KD+ SWN
Sbjct: 145 GYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVM 204
Query: 307 ------------------------------SMIAGYAQHGLAVRAIDLFEEMMKQRVKPD 336
+MI GYA++G ++A++LFE +Q +KPD
Sbjct: 205 VSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPD 264
Query: 337 AITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
LG+IS+C G+++ + + L +L ++ ++D+ + G +E+A
Sbjct: 265 ETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKA 319
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V N L+ +Y + G + A VF+ + + W S+I GY ++ A LF +M ++
Sbjct: 37 VINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREP 96
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
+ T V+ + + G+ + + ++ ++ ++ G ++ AR
Sbjct: 97 ISVLNFTISSVLKALARLTRFKGGQAVYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIAR 156
Query: 393 DFIKQMPIYPNAVIW 407
F +MP N V W
Sbjct: 157 KFFDRMP-ERNVVSW 170
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 202/360 (56%), Gaps = 19/360 (5%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
LA GFI V V ++L+ +Y+K + I A +VF+ M ++VVSW+++IA F +
Sbjct: 424 LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFE 483
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L +R M ++PN TF + LSAC +GAL G+ H +R G S V N+L+
Sbjct: 484 ALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLD 542
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
+Y KCG A F+ KD+VSWN M++G+ HGL A+ LF +M++ PD +T
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
F+ ++ +C G+V +G F M K + P L HY+C+VDLL R G L EA + I +M
Sbjct: 603 FVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRM 662
Query: 399 PIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAA 441
PI P+A +W AA+ L LEP A HV L +LY W Q A
Sbjct: 663 PIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVA 722
Query: 442 RVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
RVRK M++KGL+ + GCSW+E+ V + F +D+S+ ++ EI VL + ++MK G+ P
Sbjct: 723 RVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP 782
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 147/299 (49%), Gaps = 14/299 (4%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHDLHR-------------ERLKVDASFLSTAVTSCGS 147
+ VFD + T + +I+ H + H ++ + +++ + G
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+ A++ GF +V +SLI +Y+ + DA K+F M ++ +SWTA+
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ + + D LE+Y +M + P+D T S L+AC G L G H GF
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
Y+ VAN+L+ MY K ++++A+ VF M KD+VSW+SMIAG+ + + A+ F
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
M+ VKP+++TF+ +S+C G + GK + + G+ E + ++DL + G
Sbjct: 491 MLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 548
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 118/224 (52%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E+ + +++ + ++ D + +CG + R G +R GF V V ++
Sbjct: 178 LEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNA 237
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
L+T+Y+KC I+ A KVF+ M V + +SW A+IA + + + LEL+ M + ++PN
Sbjct: 238 LVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPN 297
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T TS+ A +G + H ++ GF + NSLI MY G + +A +F+
Sbjct: 298 LMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFS 357
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
M KD +SW +MI+GY ++G +A++++ M V PD +T
Sbjct: 358 RMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVT 401
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 98/172 (56%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
+G++++++ + I A++VF +MP R+V SW ++ + + ++ L+LY M +
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+ +TF +L C G GR H +R GF + V N+L++MY KCG++ A
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
VF+ M D +SWN+MIAG+ ++ ++LF M++ V+P+ +T V
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV 304
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKC 284
++ +S P++ + ++ C A+ G A C S+ +++ N+++SM +
Sbjct: 86 LLESSPEPPDEGAYVALFRLCEWRRAVDAGMRA-CARADAEHPSFGLRLGNAMLSMLVRF 144
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G + A VF M +D+ SWN M+ GY + G A+DL+ M+ ++PD TF V+
Sbjct: 145 GEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVL 204
Query: 345 SSCRHGGLVE--EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
+C GG+ + G+ + + G E+D + +V + + G + AR M +
Sbjct: 205 RTC--GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAV-T 261
Query: 403 NAVIWEAAESRLLLEPECAA 422
+ + W A + EC A
Sbjct: 262 DCISWNAMIAGHFENHECEA 281
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 202/360 (56%), Gaps = 19/360 (5%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
LA GFI V V ++L+ +Y+K + I A +VF+ M ++VVSW+++IA F +
Sbjct: 424 LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFE 483
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLIS 279
L +R M ++PN TF + LSAC +GAL G+ H +R G S V N+L+
Sbjct: 484 ALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLD 542
Query: 280 MYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
+Y KCG A F+ KD+VSWN M++G+ HGL A+ LF +M++ PD +T
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602
Query: 340 FLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
F+ ++ +C G+V +G F M K + P L HY+C+VDLL R G L EA + I +M
Sbjct: 603 FVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRM 662
Query: 399 PIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAA 441
PI P+A +W AA+ L LEP A HV L +LY W Q A
Sbjct: 663 PIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVA 722
Query: 442 RVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
RVRK M++KGL+ + GCSW+E+ V + F +D+S+ ++ EI VL + ++MK G+ P
Sbjct: 723 RVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAP 782
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 147/299 (49%), Gaps = 14/299 (4%)
Query: 101 SSNVFDQLLDTPVVDVEKLISMHHDLHR-------------ERLKVDASFLSTAVTSCGS 147
+ VFD + T + +I+ H + H ++ + +++ + G
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310
Query: 148 TRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAI 207
+ A++ GF +V +SLI +Y+ + DA K+F M ++ +SWTA+
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ + + D LE+Y +M + P+D T S L+AC G L G H GF
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
Y+ VAN+L+ MY K ++++A+ VF M KD+VSW+SMIAG+ + + A+ F
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490
Query: 328 MMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
M+ VKP+++TF+ +S+C G + GK + + G+ E + ++DL + G
Sbjct: 491 MLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 548
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 118/224 (52%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
+E+ + +++ + ++ D + +CG + R G +R GF V V ++
Sbjct: 178 LEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNA 237
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
L+T+Y+KC I+ A KVF+ M V + +SW A+IA + + + LEL+ M + ++PN
Sbjct: 238 LVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPN 297
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
T TS+ A +G + H ++ GF + NSLI MY G + +A +F+
Sbjct: 298 LMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFS 357
Query: 296 NMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAIT 339
M KD +SW +MI+GY ++G +A++++ M V PD +T
Sbjct: 358 RMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVT 401
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 98/172 (56%)
Query: 172 VGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSM 231
+G++++++ + I A++VF +MP R+V SW ++ + + ++ L+LY M +
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 232 LEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAV 291
+ P+ +TF +L C G GR H +R GF + V N+L++MY KCG++ A
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 292 YVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV 343
VF+ M D +SWN+MIAG+ ++ ++LF M++ V+P+ +T V
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV 304
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY-IQVANSLISMYCKC 284
++ +S P++ + ++ C A+ G A C S+ +++ N+++SM +
Sbjct: 86 LLESSPEPPDEGAYVALFRLCEWRRAVDAGMRA-CARADAEHPSFGLRLGNAMLSMLVRF 144
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G + A VF M +D+ SWN M+ GY + G A+DL+ M+ ++PD TF V+
Sbjct: 145 GEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVL 204
Query: 345 SSCRHGGLVE--EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
+C GG+ + G+ + + G E+D + +V + + G + AR M +
Sbjct: 205 RTC--GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAV-T 261
Query: 403 NAVIWEAAESRLLLEPECAA 422
+ + W A + EC A
Sbjct: 262 DCISWNAMIAGHFENHECEA 281
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 224/390 (57%), Gaps = 19/390 (4%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
VD+ + + +++C N +AI+ G + V ++L+ Y+KC + + KV
Sbjct: 190 VDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKV 249
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLEPNDFTFTSILSACTGSGA 251
F++M ++VVSW ++IA +AQ E++ M++ + N+ T +++L AC GA
Sbjct: 250 FDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGA 309
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L G H Q I+MG+ + + +A S+I MYCKCG E A F+ M K++ SW +MIAG
Sbjct: 310 LRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAG 369
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKP 370
Y HG A A+D+F +M+ VKP+ ITF+ V+++C H G +EEG +F++M+ ++ ++P
Sbjct: 370 YGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEP 429
Query: 371 ELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------------EAAE--SRLL 415
++HY C+VDLLGRAG ++EA + IK M + + V+W E AE +R L
Sbjct: 430 GVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISAREL 489
Query: 416 --LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAE 473
L+P +V LAN+YA W R+R L+KD+GL PG S +E+ V+ F
Sbjct: 490 FKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVG 549
Query: 474 DKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
DK + + +I L+ L +++ GYVP +
Sbjct: 550 DKEHPQHEKIYKYLEELSVKLQEAGYVPNM 579
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 10/278 (3%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
+K + S A+ SC + ++ G A+ GF ++++V S+LI +YSKC + +A
Sbjct: 78 IKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNAR 137
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN---------DFTFTS 241
+F+E+P RN+V+WT++I + Q L +++ E N S
Sbjct: 138 VLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMIS 197
Query: 242 ILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
+LSAC+ H I++G + V N+L+ Y KCG V + VF++M KD
Sbjct: 198 VLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKD 257
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYF 360
+VSWNSMIA YAQ+GL+ A ++F M+K K + +T ++ +C H G + G
Sbjct: 258 VVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLH 317
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
D + K G + + ++D+ + G E AR+ M
Sbjct: 318 DQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGM 355
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 200 NVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH 259
+V SW ++IA A+ L + MR ++PN TF + +C+ L G+ AH
Sbjct: 46 DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105
Query: 260 CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAV 319
Q + GF S + V+++LI MY KCG + A +F+ + ++IV+W S+I GY Q+ A
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165
Query: 320 RAIDLFEEMMKQRVKP---------DAITFLGVISSC 347
A+ +F+E + ++ + D++ + V+S+C
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSAC 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 301 DIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYF 360
D+ SWNS+IA A+ G + ++ F M K +KP+ TF I SC + GK
Sbjct: 46 DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105
Query: 361 DSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G + +L S ++D+ + G L AR ++P N V W
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIP-RRNIVTW 151
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 253/492 (51%), Gaps = 41/492 (8%)
Query: 44 SLHKALRVLDIISPRTRDSTKTE---------VHLRLIQDFLQT----DSKHLDSQKFNH 90
+L LR +D ++ + S TE +H I+ L++ D + + + +
Sbjct: 170 TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELLRDCQKVFDRMYVR 229
Query: 91 DFTGTNSTFGSSNVFDQLLDTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
D NS + + +Q L + IS+ ++ R++ D L + + +
Sbjct: 230 DLISWNSIIKAYELNEQPL--------RAISLFQEMRLSRIQPDCLTLISLASILSQLGD 281
Query: 151 IRGGAPYQCLAIRTG-FIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
IR Q +R G F+ ++ +G++++ +Y+K ++ A VF +P +V+SW II+
Sbjct: 282 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 341
Query: 210 AFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+AQ +E+Y +M + N T+ S+L AC+ +GAL QG H + ++ G +
Sbjct: 342 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 401
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
+ V SL MY KCG +E+A+ +F + + V WN++IA + HG +A+ LF+EM
Sbjct: 402 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 461
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGL 387
+ + VKPD ITF+ ++S+C H GLV+EG+ F+ M +G+ P L HY C+VD+ GRAG
Sbjct: 462 LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQ 521
Query: 388 LEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANL 430
LE A FIK M + P+A IW A+E +EPE HV L+N+
Sbjct: 522 LETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNM 581
Query: 431 YAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFL 490
YA W+ +R + KGL+ PG S +E+ N V F ++++ E+ L L
Sbjct: 582 YASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 641
Query: 491 VDQMKTLGYVPE 502
++K +GYVP+
Sbjct: 642 QAKLKMIGYVPD 653
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 130/260 (50%), Gaps = 36/260 (13%)
Query: 149 RNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAII 208
R + G CLA++ GF+ +VYV +SLI LYS+ + + +A +F+EMPVR++ SW A+I
Sbjct: 97 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 156
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ + Q L L N + + T S+LSACT +G +G + H +I+ G
Sbjct: 157 SGYCQSGNAKEALTL----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 212
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
S + + + VF+ M+ +D++SWNS+I Y + +RAI LF+EM
Sbjct: 213 SEL---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 257
Query: 329 MKQRVKPDAITF---------LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVV 379
R++PD +T LG I +CR V ++ K ++ + VV
Sbjct: 258 RLSRIQPDCLTLISLASILSQLGDIRACR--------SVQGFTLRKGWFLEDITIGNAVV 309
Query: 380 DLLGRAGLLEEARDFIKQMP 399
+ + GL++ AR +P
Sbjct: 310 VMYAKLGLVDSARAVFNWLP 329
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEW---QVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
F+ + R+V +W +I+ + + +V C L+ M +S L P+ TF S+L AC
Sbjct: 41 TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACR- 97
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
+ G HC ++ GF + VA SLI +Y + V A +F+ M +D+ SWN+M
Sbjct: 98 --TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAM 155
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
I+GY Q G A A+ L + D++T + ++S+C G G KHGL
Sbjct: 156 ISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 211
Query: 369 KPEL 372
+ EL
Sbjct: 212 ESEL 215
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 278 ISMYCKCGNVEEAV---------YVFNNMHGKDIVSWNSMIAGYAQHGLA---VRAIDLF 325
I++ C NV V + F+++ +D+ +WN MI+GY + G + +R LF
Sbjct: 17 IALICNQPNVSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 76
Query: 326 EEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
M+ + PD TF V+ +CR +++ K++ ++ K G ++ + ++ L R
Sbjct: 77 --MLSSGLTPDYRTFPSVLKACR--TVIDGNKIHCLAL-KFGFMWDVYVAASLIHLYSRY 131
Query: 386 GLLEEARDFIKQMPI 400
+ AR +MP+
Sbjct: 132 KAVGNARILFDEMPV 146
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 201/359 (55%), Gaps = 18/359 (5%)
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+A + + +C + G + +R G ++++V +SLI +Y+KC + A VF
Sbjct: 313 NAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF 372
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
++ VS+ +I +++ L L+ MR +P+ +F ++SAC AL
Sbjct: 373 NT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALK 431
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
QG+ H +R +S++ V+NSL+ Y KCG ++ A +FN + KD+ SWN+MI GY
Sbjct: 432 QGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYG 491
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELD 373
G AI +FE M V+ D ++++ V+S+C HGGLVE G YF M L+P
Sbjct: 492 MIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEM 551
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLL 416
HY+C+VDLLGRAG +EEA I+Q+PI P+A IW AAE L
Sbjct: 552 HYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFEL 611
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
+P+ ++ L+N+YA WD+A ++R+LMK +G K NPGCSW++I + V+ F AE++
Sbjct: 612 KPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 670
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 125/236 (52%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C +++ G + V ++L+ Y KC + ++VF E +N VSW +II A + +
Sbjct: 135 HCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRC 194
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
L +RMM ++ +PN T +SIL G+ H ++RMG + I +ANSL
Sbjct: 195 WDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSL 254
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
I MY K G+ EA +F+N+ ++IVSWN+MIA YA + L + AI +M + P+A
Sbjct: 255 IDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNA 314
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARD 393
+TF V+ +C G + GK + GL +L + ++D+ + G L AR+
Sbjct: 315 VTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARN 370
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 136/256 (53%), Gaps = 2/256 (0%)
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
+ G ++R G ++++ +SLI +Y+K +A +F + RN+VSW A+IA +
Sbjct: 230 KAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANY 289
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
A + M+ + PN TFT++L AC G LG G+ H +R+G S +
Sbjct: 290 ALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDL 349
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
V+NSLI MY KCG + A VFN KD VS+N +I GY++ +++++LF EM
Sbjct: 350 FVSNSLIDMYAKCGCLHSARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMRLL 408
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
KPD ++F+GVIS+C + +++GK ++ L L + ++D + G ++ A
Sbjct: 409 GKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIA 468
Query: 392 RDFIKQMPIYPNAVIW 407
Q+ ++ + W
Sbjct: 469 CRLFNQI-LFKDVASW 483
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 5/295 (1%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
R +++D + C + +I G + + GF +VYVG++L+ LY C +
Sbjct: 3 RRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLN 62
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSAC 246
DA ++F+EMP R+VVSW II + Y M+ S+++PN + S+L
Sbjct: 63 DARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPIS 122
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
R HC ++++G S + N+L+ Y KCG+V+ VFN K+ VSWN
Sbjct: 123 AALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWN 182
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKH 366
S+I G A G A++ F M+ +P+++T ++ + GK +
Sbjct: 183 SIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRM 242
Query: 367 GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAAESRLLLE 417
G + ++ + ++D+ ++G EA + + NA+I A +RL LE
Sbjct: 243 GTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLE 297
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 223/406 (54%), Gaps = 21/406 (5%)
Query: 118 KLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTG-FIANVYVGSSL 176
+ I + ++ R++ D L + + IR Q +R G F+ ++ +G+++
Sbjct: 331 RAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR--NSMLEP 234
+ +Y+K ++ A VF +P ++V+SW II+ +AQ +E+Y +M +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISA 450
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T+ S+L AC+ +GAL QG H + ++ G + + V SL MY KCG +++A+ +F
Sbjct: 451 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLF 510
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ + V WN++IA + HG +A+ LF+EM+ + VKPD ITF+ ++S+C H GLV+
Sbjct: 511 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 570
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE----- 408
EG+ F+ M +G+ P L HY C+VDL GRAG LE A +FIK MP+ P+A IW
Sbjct: 571 EGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSA 630
Query: 409 ------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
A+E +EPE HV L+N+YA W+ +R + KGL+ P
Sbjct: 631 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTP 690
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
G S +E+ N V F ++++ E+ L L +++K +GYVP+
Sbjct: 691 GWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPD 736
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 168/335 (50%), Gaps = 21/335 (6%)
Query: 131 LKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAY 190
L+ D + + +C RN+ G CLA++ GF+ +VYV +SLI LY + +++A
Sbjct: 149 LQPDYRTFPSVLKAC---RNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNAR 205
Query: 191 KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSG 250
+F+EMP R++ SW A+I+ + Q L L +R + T S+LSACT +G
Sbjct: 206 ILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR----AMDSVTVVSLLSACTEAG 261
Query: 251 ALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIA 310
+G + H +I+ G S + V+N LI +Y + G++++ VF+ M+ +D++SWNS+I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIK 321
Query: 311 GYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK-VYFDSMAKHGLK 369
Y + +RAI LF+EM R++PD +T + + S G + + V ++ K
Sbjct: 322 AYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFL 381
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVI---------WEAAESRLLL 416
++ + VV + + GL++ AR +P I N +I EA E ++
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKG 451
E E + + QA +R+ MK G
Sbjct: 442 EEEGGEISANQGTWVSVLPACSQAGALRQGMKLHG 476
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 153/278 (55%), Gaps = 4/278 (1%)
Query: 133 VDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKV 192
+D+ + + +++C + G +I+ G + ++V + LI LY++ + D KV
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKV 304
Query: 193 FEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGAL 252
F+ M VR+++SW +II A+ Q + L++ MR S ++P+ T S+ S + G +
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEI 364
Query: 253 GQGRSAHCQTIRMGFF-SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
RS T+R G+F I + N+++ MY K G V+ A VFN + KD++SWN++I+G
Sbjct: 365 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISG 424
Query: 312 YAQHGLAVRAIDLFEEMMKQ--RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
YAQ+G A AI+++ M ++ + + T++ V+ +C G + +G + K+GL
Sbjct: 425 YAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 484
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
++ + + D+ G+ G L++A Q+P N+V W
Sbjct: 485 LDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPW 521
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 125/249 (50%), Gaps = 15/249 (6%)
Query: 158 QCLAIR---TGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQE 214
+CL R + I NV + + L+ LY + A F+ + R+V +W +I+ + +
Sbjct: 71 KCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRA 130
Query: 215 W---QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
+V C L+ M +S L+P+ TF S+L AC + G HC ++ GF +
Sbjct: 131 GYSSEVIRCFSLF--MLSSGLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFMWDV 185
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
VA SLI +YC+ G V A +F+ M +D+ SWN+MI+GY Q G A A+ L + +
Sbjct: 186 YVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM 245
Query: 332 RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
D++T + ++S+C G G KHGL+ EL + ++DL G L++
Sbjct: 246 ----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDC 301
Query: 392 RDFIKQMPI 400
+ +M +
Sbjct: 302 QKVFDRMYV 310
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 256 RSAHCQTIRMGFFSYIQ---VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
+SA C R+ + IQ ++ L+++YC GNV A Y F+++H +D+ +WN MI+GY
Sbjct: 68 QSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGY 127
Query: 313 AQHGLA---VRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+ G + +R LF M+ ++PD TF V+ +CR+ V +G K G
Sbjct: 128 GRAGYSSEVIRCFSLF--MLSSGLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFM 182
Query: 370 PELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
++ + ++ L R G + AR +MP
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMP 212
>gi|242061948|ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 199/346 (57%), Gaps = 23/346 (6%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
+S+I+ Y + + + +A +VF+ MP ++ V+WTA+I+ Q + D LEL+ M +
Sbjct: 246 TSMISGYCQVKKLDEALQVFDMMPDKDRVAWTALISGHEQNGEEDTALELFERMLAEGVS 305
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS---YIQVANSLISMYCKCGNVEEA 290
P F S+L AC G + +G+ HC +R S I + N+L+ MY KCG++ A
Sbjct: 306 PTTFALVSVLGACAKLGLVTRGKELHCSILRRSIGSDPFNIFIHNALVDMYSKCGDMTAA 365
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+ VF+ M +D +SWNSM+ G++ +GL +++ +FEEM+ V+P +TFL V+++C H
Sbjct: 366 MAVFHRMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHS 425
Query: 351 GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP--IYPN-AVIW 407
GLV G++ +SM HG++P +HY+ +D LGR LEEA +FIK +P I P A W
Sbjct: 426 GLVSNGRLILESMEDHGVEPRAEHYAAFIDALGRNRQLEEAIEFIKDLPSRIGPGTAGSW 485
Query: 408 -----------------EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDK 450
E AE LEP + +V L+N+YA WD A RVR LMK+K
Sbjct: 486 GALLGACRLHGNIELAEEVAEFLFKLEPGNSGRYVMLSNIYAAAGQWDDARRVRGLMKEK 545
Query: 451 GLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKT 496
GLK + SWIE+ ++ + F A+D S+ EI +L L+D M T
Sbjct: 546 GLKKDQAYSWIEVRSLKHVFVADDMSHCEADEIYEMLGKLLDHMST 591
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 41/265 (15%)
Query: 176 LITLYSKCRVIIDAYKVFEEMPV--RNVVSWTAIIAAFAQEW-QVDMCLELYRMMRNSML 232
L L + DA +F+ MP RN+VS+ ++++ Q + + R+ R+ L
Sbjct: 109 LAALLRRPDTFPDALHLFDTMPADARNLVSYNTLMSSLVHHGRQAEALRVVARLARDRFL 168
Query: 233 EP----NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
P + FT S+ +AC G A R H + G + +AN++++ Y K VE
Sbjct: 169 GPGLAMDRFTVVSVATACAGIRAARPLREMHGAVVVSGMELTVIMANAMVNAYSKAWRVE 228
Query: 289 EAVYVFNNMHGKDIVSWNSMIAGY-------------------------------AQHGL 317
EA ++F+ + +D V+W SMI+GY Q+G
Sbjct: 229 EARHLFDQISIRDNVTWTSMISGYCQVKKLDEALQVFDMMPDKDRVAWTALISGHEQNGE 288
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPE---LDH 374
A++LFE M+ + V P + V+ +C GLV GK S+ + + + +
Sbjct: 289 EDTALELFERMLAEGVSPTTFALVSVLGACAKLGLVTRGKELHCSILRRSIGSDPFNIFI 348
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMP 399
++ +VD+ + G + A +MP
Sbjct: 349 HNALVDMYSKCGDMTAAMAVFHRMP 373
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 24/246 (9%)
Query: 103 NVFDQLLDTPVVDVEKLISMHHDLHRERLKVD------------ASF-LSTAVTSCGSTR 149
VFD + D V LIS H E ++ +F L + + +C
Sbjct: 263 QVFDMMPDKDRVAWTALISGHEQNGEEDTALELFERMLAEGVSPTTFALVSVLGACAKLG 322
Query: 150 NIRGGAPYQCLAIRTGFIA---NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTA 206
+ G C +R + N+++ ++L+ +YSKC + A VF MP R+ +SW +
Sbjct: 323 LVTRGKELHCSILRRSIGSDPFNIFIHNALVDMYSKCGDMTAAMAVFHRMPERDFISWNS 382
Query: 207 IIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMG 266
++ F+ L ++ M + + P TF ++L+AC+ SG + GR G
Sbjct: 383 MVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLILESMEDHG 442
Query: 267 FFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGK----DIVSWNSMIAGYAQHGLAVRAI 322
+ + I + +EEA+ ++ + SW +++ HG I
Sbjct: 443 VEPRAEHYAAFIDALGRNRQLEEAIEFIKDLPSRIGPGTAGSWGALLGACRLHG----NI 498
Query: 323 DLFEEM 328
+L EE+
Sbjct: 499 ELAEEV 504
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 229/430 (53%), Gaps = 32/430 (7%)
Query: 104 VFDQLLDTPVVDVEKLI-------------SMHHDLHRERLKVDASFLSTAVTSCGSTRN 150
VFD++LD VV LI + D+ R+K + L++ + SCG+ +
Sbjct: 159 VFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGD 218
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G L +++G + V +SL+T+YSKC ++ D+ KVF + + V+WT+ I
Sbjct: 219 LVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVG 278
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
Q + ++ L ++R M + PN FTF+SIL AC+ L G H T+++G
Sbjct: 279 LVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGN 338
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
V +LI +Y KCGNVE+A VF ++ D+VS N+MI YAQ+G A++LFE M K
Sbjct: 339 KYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKK 398
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLE 389
KP+ +TF+ ++ +C + GLVEEG F + H ++ DHY+C++DLLGRA E
Sbjct: 399 LGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFE 458
Query: 390 EARDFIKQMPIYPNAVIW-------------EAAES--RLLLE--PECAATHVQLANLYA 432
EA I++ P+ + W E AE + +L+ P TH+ L N+YA
Sbjct: 459 EAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYA 517
Query: 433 GVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVD 492
WD ++ +D LK P SW++I V+ F A D S+ R EI +L L++
Sbjct: 518 SAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIE 577
Query: 493 QMKTLGYVPE 502
++ TLGY P+
Sbjct: 578 KVITLGYNPD 587
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 133/238 (55%), Gaps = 2/238 (0%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNS 230
+ G LI Y KC VI +A K+F+EMP R++V+W ++I++ + +ELY M
Sbjct: 36 FFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFE 95
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF-FSYIQVANSLISMYCKCGNVEE 289
+ P+ +TF++I A + G +G+ AH + +GF S VA ++ MY K G +++
Sbjct: 96 GVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKD 155
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A +VF+ + KD+V + ++I GY Q GL A+++FE+M+ R+KP+ T V+ SC +
Sbjct: 156 ARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGN 215
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
G + GK+ + K GL+ + + ++ + + ++E++ + Y + V W
Sbjct: 216 LGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA-YASHVTW 272
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 139/266 (52%), Gaps = 5/266 (1%)
Query: 152 RGGAPYQCLAIRTGF-IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
R G LA+ GF +++ +V + ++ +Y+K + DA VF+ + ++VV +TA+I
Sbjct: 118 REGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVG 177
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ Q LE++ M S ++PN++T S+L +C G L G+ H ++ G S
Sbjct: 178 YNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESV 237
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ SL++MY KC VE+++ VFN++ V+W S I G Q+G A+ +F EM++
Sbjct: 238 VASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIR 297
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+ P+ TF ++ +C ++E G+ K G+ + ++ L G+ G +E+
Sbjct: 298 CSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEK 357
Query: 391 ARDFIKQMP----IYPNAVIWEAAES 412
AR + + + N +I+ A++
Sbjct: 358 ARSVFESLTELDVVSINTMIYAYAQN 383
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 223/402 (55%), Gaps = 19/402 (4%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I + +++ + + D +++ + +C ++ G + + V ++L+ +
Sbjct: 740 IRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDM 799
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + +AY VF ++PV+++VSW +I +++ + L+L+ M+ P+ T
Sbjct: 800 YAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITM 858
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
+L AC AL GR H +R G+ S + VAN+LI MY KCG++ A +F+ +
Sbjct: 859 ACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPE 918
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
KD+++W MI+G HGL AI F++M +KPD ITF ++ +C H GL+ EG +
Sbjct: 919 KDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGF 978
Query: 360 FDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA--------- 409
F+SM ++ ++P+L+HY+C+VDLL R G L +A + I+ MPI P+A IW A
Sbjct: 979 FNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHH 1038
Query: 410 --------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
AE LEP+ A +V LAN+YA W++ ++R+ + +GLK +PGCSWI
Sbjct: 1039 DVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWI 1098
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEV 503
E+ F + D ++ + I +L+ L +MK G+ P++
Sbjct: 1099 EVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKM 1140
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 163/309 (52%), Gaps = 14/309 (4%)
Query: 104 VFDQLLDTPVVDVEKLIS---MHHDLHRE----------RLKVDASFLSTAVTSCGSTRN 150
+FD+L D VV +IS M+ H R+ VD + L +V +C + +
Sbjct: 610 LFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGS 669
Query: 151 IRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAA 210
+ G ++ F V ++L+ +YSKC + DA + FE+M + VVSWT++IAA
Sbjct: 670 LSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAA 729
Query: 211 FAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+ +E D + L+ M + + P+ ++ TS+L AC +L +GR H +
Sbjct: 730 YVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALC 789
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMK 330
+ V+N+L+ MY KCG++EEA VF+ + KDIVSWN+MI GY+++ L A+ LF EM K
Sbjct: 790 LPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQK 849
Query: 331 QRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEE 390
+ +PD IT ++ +C +E G+ + ++G EL + ++D+ + G L
Sbjct: 850 ES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVH 908
Query: 391 ARDFIKQMP 399
AR +P
Sbjct: 909 ARLLFDMIP 917
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 128/245 (52%), Gaps = 1/245 (0%)
Query: 163 RTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLE 222
+ GF + V +SLI Y K + A+K+F+E+ R+VVSW ++I+ LE
Sbjct: 581 KLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALE 640
Query: 223 LYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYC 282
+ M + + T + ++AC G+L GR+ H Q ++ F + N+L+ MY
Sbjct: 641 FFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYS 700
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
KCGN+ +A+ F M K +VSW S+IA Y + GL AI LF EM + V PD +
Sbjct: 701 KCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTS 760
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP 402
V+ +C G +++G+ + + K+ + L + ++D+ + G +EEA Q+P+
Sbjct: 761 VLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPV-K 819
Query: 403 NAVIW 407
+ V W
Sbjct: 820 DIVSW 824
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 134/271 (49%), Gaps = 1/271 (0%)
Query: 129 ERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIID 188
++ ++D + S+ + C + ++ G + G +G+ L+ +Y C + +
Sbjct: 445 QKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALRE 504
Query: 189 AYKVFEEMPVRN-VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACT 247
++F+ + N V W +++ +A+ + L++ M+ + N +TF+ IL
Sbjct: 505 GRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFA 564
Query: 248 GSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNS 307
G +G+ + H ++GF SY V NSLI+ Y K G V+ A +F+ + +D+VSWNS
Sbjct: 565 TLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNS 624
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI+G +G + A++ F +M+ RV D T + +++C + G + G+ K
Sbjct: 625 MISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKAC 684
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
E+ + ++D+ + G L +A ++M
Sbjct: 685 FSREVMFNNTLLDMYSKCGNLNDAIQAFEKM 715
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 126/369 (34%), Positives = 210/369 (56%), Gaps = 19/369 (5%)
Query: 167 IANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+ N+ + +I +K + DA K+F+EM R+ +SW++++ + + LE+++
Sbjct: 225 VKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQ 284
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
M+ P F +S+L+AC+ GA+ QGR H R + +L+ MY KCG
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGR 344
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
++ VF M ++I +WN+MI G A HG A A++LF ++ + R+KP+ IT +GV+++
Sbjct: 345 LDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTA 404
Query: 347 CRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAV 405
C H G V++G F +M + +G+ PEL+HY C+VDLLGR+GL EA D I MP+ PNA
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAA 464
Query: 406 IWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMK 448
+W A + L LEP+ + +V L+N+YA V +D +++RKLMK
Sbjct: 465 VWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMK 524
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKV 508
D+G+KT PG S +++ V+ F+ D S+ ++ EI L + ++++ G+ P+ +
Sbjct: 525 DRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLF 584
Query: 509 D-DASHKRT 516
D D K T
Sbjct: 585 DIDEEEKET 593
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 136/326 (41%), Gaps = 72/326 (22%)
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV--IIDAYKVFE 194
F S ++TS + G L +R+G + YV +L+ Y+ A KVF
Sbjct: 38 FDSKSITSLQYLTQLHG------LVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFS 91
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALG 253
+P NV W +I + ++ + Y RM+ ++ PN FT+ ++ AC+ + A+
Sbjct: 92 SIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA--RPNKFTYPTLFKACSVAQAVQ 149
Query: 254 QGRSAHCQTIRMGFFSYIQVA------------------------------NSLISMYCK 283
+GR H ++ G S + + N++I Y K
Sbjct: 150 EGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLK 209
Query: 284 C-------------------------------GNVEEAVYVFNNMHGKDIVSWNSMIAGY 312
C GN+ +A +F+ M +D +SW+SM+ GY
Sbjct: 210 CGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGY 269
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
G A+++F++M ++ +P V+++C + G +++G+ + ++ +K +
Sbjct: 270 ISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDA 329
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++D+ + G L+ + ++M
Sbjct: 330 VLGTALLDMYAKCGRLDMGWEVFEEM 355
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 7/218 (3%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + + RE + LS+ + +C + I G R + +G++L+ +
Sbjct: 279 LEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDM 338
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
Y+KC + ++VFEEM R + +W A+I A + + LEL+ ++ ++PN T
Sbjct: 339 YAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITL 398
Query: 240 TSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
+L+AC +G + +G QT+R G ++ ++ + + G EA + N+M
Sbjct: 399 VGVLTACAHAGFVDKGLRIF-QTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
Query: 298 HGK-DIVSWNSMIAGYAQHG---LAVRAIDLFEEMMKQ 331
K + W +++ HG LA R + E+ Q
Sbjct: 458 PMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQ 495
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 232/451 (51%), Gaps = 54/451 (11%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
+D + L LH + D +++ +++C + N+R G +RT N V
Sbjct: 170 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 229
Query: 174 SSLITLYSK------CRVIID---------------------------AYKVFEEMPVRN 200
++LI+ Y+K R I+D A ++F M R+
Sbjct: 230 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 289
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
VV+WTA+I + Q + D ++L+R M EPN +T ++LS C L G+ HC
Sbjct: 290 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 349
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAV 319
+ IR V+N++I+MY + G+ A +F+ + K+ ++W SMI AQHG
Sbjct: 350 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 409
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCV 378
A+ LFEEM++ V+PD IT++GV+S+C H G V EGK Y+D + +H + PE+ HY+C+
Sbjct: 410 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 469
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECA 421
VDLL RAGL EA++FI++MP+ P+A+ W AAE L ++P +
Sbjct: 470 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 529
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
+ +AN+Y+ W AAR+ K K+K ++ G SW I + ++ F A+D + +
Sbjct: 530 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 589
Query: 482 EILPVLDFLVDQMKTLGYVPEVHE--EKVDD 510
+ + + +++K G+VP++ VDD
Sbjct: 590 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDD 620
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 40/255 (15%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFT 238
+++K + DA VF EMP R+ VSWT ++ + + ++ M P FT
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV----- 293
T++LS+C + A GR H +++G S + VANS+++MY KCG+ E A V
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 294 --------------------------FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
F +M + IVSWN+MIAGY Q+GL +A+ LF
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 328 MMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL---- 382
M+ + + PD T V+S+C + G V GK + + L+ E+ + S V + L
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGK----QVHAYILRTEMAYNSQVTNALISTY 236
Query: 383 GRAGLLEEARDFIKQ 397
++G +E AR + Q
Sbjct: 237 AKSGSVENARRIMDQ 251
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 138/335 (41%), Gaps = 65/335 (19%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ ++SC T+ G ++ G + V V +S++ +Y KC A VFE MP
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 198 VRNV-------------------------------VSWTAIIAAFAQEWQVDMCLELY-R 225
VR+V VSW A+IA + Q L+L+ R
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ S + P++FT TS+LSAC G + G+ H +R QV N+LIS Y K G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 286 NVEEAVYV---------------------------------FNNMHGKDIVSWNSMIAGY 312
+VE A + F M+ +D+V+W +MI GY
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+G AIDLF M+ +P++ T V+S C ++ GK + L+
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ ++ + R+G AR Q+ + W
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITW 395
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 220/384 (57%), Gaps = 24/384 (6%)
Query: 136 SFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEE 195
+F+ A T+ G G A G + YV + L+ LY++C + A VF+
Sbjct: 134 AFVLKACTALGE------GQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDG 187
Query: 196 M-PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
M +N+V+W+++I +++ V+ L L+R M+ + P++ T S++SAC +GAL
Sbjct: 188 MVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDL 247
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
G+ H R G ++++ +LI MY KCG +E A VF++M +D +W++MI G A
Sbjct: 248 GKWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAM 307
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
HGLA A+ LF M++ +V+P+ +TF+GV+S+C H GLV++G+ Y+ +M + G++ +++
Sbjct: 308 HGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRYWCTMQELGIEASMEN 367
Query: 375 YSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------------EAAESRLL-LE 417
Y C+VDLL R+GLL+EA F+ MPI PN+VIW E A RL LE
Sbjct: 368 YGCMVDLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLVASKSSNRIDIVELASRRLFELE 427
Query: 418 PECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN 477
P+ +V L+NLYA WD+ +RK MKD + GCS IEI +++F D S+
Sbjct: 428 PQNPENYVLLSNLYALNSQWDRVRYMRKKMKDNNVTVVAGCSSIEINGYLHKFVVSDGSH 487
Query: 478 TRLSEILPVLDFLVDQMKTLGYVP 501
+ +I VL + D++ G+ P
Sbjct: 488 PEIKKIRLVLREIADRVLCAGHKP 511
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 10/217 (4%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQ------VDMCLELYRMMRNSMLEPNDFTFTSI 242
A +F+++P + ++I A + D L RM+ PN FT +
Sbjct: 77 ARALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAFV 136
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKD 301
L ACT ALG+G+ H Q G V L+++Y +C V A VF+ M K+
Sbjct: 137 LKACT---ALGEGQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVEDKN 193
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFD 361
+V+W+SMI GY++ G+ A+ LF +M V PD +T + VIS+C G ++ GK
Sbjct: 194 LVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHA 253
Query: 362 SMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ + G+ +L+ + ++D+ + GL+E A+ M
Sbjct: 254 FIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSM 290
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 116 VEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSS 175
V + + + D+ + D + + +++C + G R G ++ + ++
Sbjct: 210 VNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTA 269
Query: 176 LITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPN 235
LI +Y+KC +I A VF+ M R+ +W+A+I A + L L+ M + PN
Sbjct: 270 LIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPN 329
Query: 236 DFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFN 295
+ TF +LSAC SG + GR C +G + ++ ++ + C+ G ++EA
Sbjct: 330 NVTFVGVLSACAHSGLVDDGRRYWCTMQELGIEASMENYGCMVDLLCRSGLLDEAFSFVT 389
Query: 296 NMHGKDIVSWNSMI 309
M +S NS+I
Sbjct: 390 GMP----ISPNSVI 399
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 231/437 (52%), Gaps = 35/437 (8%)
Query: 91 DFTGTNSTFG-SSNVFDQLLDTPVVD-------------VEKLISMHHDLHRERLKVDAS 136
DF N F + VFD L VV +E+ + + D+ E + +
Sbjct: 256 DFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEF 315
Query: 137 FLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEM 196
LS + +CGS I G C AI+ I ++ V ++L+++Y + ++ + + ++
Sbjct: 316 ALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI 372
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR 256
++VSWT I+A Q + + L M + PN + F+S+LS+C +L QG
Sbjct: 373 ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGM 432
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
HC +++G S I N+LI+MY KCG + A F+ MH D+ SWNS+I G+AQHG
Sbjct: 433 QFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHG 492
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHY 375
A +A+++F +M +KPD TFLGV+ C H G+VEEG+++F M ++ P HY
Sbjct: 493 DANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHY 552
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEP 418
+C++D+LGR G +EA I MP P+A+IW+ AA+ + L
Sbjct: 553 ACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSD 612
Query: 419 ECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNT 478
+A++V ++N+YA W+ A +VR+ M + G+K + GCSWIEI N V+ F + D S+
Sbjct: 613 RDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHP 672
Query: 479 RLSEILPVLDFLVDQMK 495
I +L LV M+
Sbjct: 673 NSDSIYQMLGELVAVMQ 689
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 153/298 (51%), Gaps = 10/298 (3%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E ++M D+ + + + A+ +C +R G LA+R GF + ++GS L
Sbjct: 96 EAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCL 155
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +YS+C + A +VF+ M +VV +T++I+AF + + ++ E M L+PN+
Sbjct: 156 IEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNE 215
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTI-RMGFFSY-IQVANSLISMYCKCGNVEEAVYVF 294
T T+IL+AC LGQ H I ++G S + + +LI Y + G + A VF
Sbjct: 216 HTMTTILTACP--RVLGQ--QIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVF 271
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+++H K++VSW SM+ Y + G A+ +F +M+ + V P+ V+ +C GL
Sbjct: 272 DSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL-- 329
Query: 355 EGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAES 412
G+ S KH L ++ + ++ + GR GL+EE + ++ P+ V W A S
Sbjct: 330 -GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE-NPDLVSWTTAIS 385
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 186 IIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
+ DA +F+ MP +NVV+WT++++ + + + + L ++ M S + PNDF + L A
Sbjct: 64 LADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVA 123
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
C GAL G H +R GF + + LI MY +CG++ A VF+ M D+V +
Sbjct: 124 CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGY 183
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCR-------HGGLVEEGKV 358
S+I+ + ++G A + +M+KQ +KP+ T ++++C HG L++ K+
Sbjct: 184 TSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIK--KI 241
Query: 359 YFDSMAKHGLKPELDHYS 376
S + + +D YS
Sbjct: 242 GLRSQSVYSSTALIDFYS 259
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%)
Query: 283 KCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLG 342
K G + +A+ +F+ M K++V+W S+++GY ++G A+ +F +M++ V P+
Sbjct: 60 KSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNA 119
Query: 343 VISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ +C G + G+ + G + SC++++ R G L A++ +M
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 175
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 232/451 (51%), Gaps = 54/451 (11%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
+D + L LH + D +++ +++C + N+R G +RT N V
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335
Query: 174 SSLITLYSK------CRVIID---------------------------AYKVFEEMPVRN 200
++LI+ Y+K R I+D A ++F M R+
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
VV+WTA+I + Q + D ++L+R M EPN +T ++LS C L G+ HC
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAV 319
+ IR V+N++I+MY + G+ A +F+ + K+ ++W SMI AQHG
Sbjct: 456 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCV 378
A+ LFEEM++ V+PD IT++GV+S+C H G V EGK Y+D + +H + PE+ HY+C+
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 575
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECA 421
VDLL RAGL EA++FI++MP+ P+A+ W AAE L ++P +
Sbjct: 576 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 635
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
+ +AN+Y+ W AAR+ K K+K ++ G SW I + ++ F A+D + +
Sbjct: 636 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 695
Query: 482 EILPVLDFLVDQMKTLGYVPEVHE--EKVDD 510
+ + + +++K G+VP++ VDD
Sbjct: 696 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDD 726
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 40/265 (15%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV+ +SL+++++K + DA VF EMP R+ VSWT ++ + + ++ M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
P FT T++LS+C + A GR H +++G S + VANS+++MY KCG+ E
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSE 216
Query: 289 EAVYV-------------------------------FNNMHGKDIVSWNSMIAGYAQHGL 317
A V F +M + IVSWN+MIAGY Q+GL
Sbjct: 217 TATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGL 276
Query: 318 AVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+A+ LF M+ + + PD T V+S+C + G V GK + + L+ E+ + S
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK----QVHAYILRTEMAYNS 332
Query: 377 CVVDLL----GRAGLLEEARDFIKQ 397
V + L ++G +E AR + Q
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQ 357
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 138/335 (41%), Gaps = 65/335 (19%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ ++SC T+ G ++ G + V V +S++ +Y KC A VFE MP
Sbjct: 167 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 226
Query: 198 VRNV-------------------------------VSWTAIIAAFAQEWQVDMCLELY-R 225
VR+V VSW A+IA + Q L+L+ R
Sbjct: 227 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 286
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ S + P++FT TS+LSAC G + G+ H +R QV N+LIS Y K G
Sbjct: 287 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 346
Query: 286 NVEEAVYV---------------------------------FNNMHGKDIVSWNSMIAGY 312
+VE A + F M+ +D+V+W +MI GY
Sbjct: 347 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 406
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+G AIDLF M+ +P++ T V+S C ++ GK + L+
Sbjct: 407 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 466
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ ++ + R+G AR Q+ + W
Sbjct: 467 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITW 501
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
NSL+SM+ K G + +A VF M +D VSW M+ G + G AI +M
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
P T V+SSC G+ + K GL + + V+++ G+ G E A
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221
Query: 395 IKQMPI 400
++MP+
Sbjct: 222 FERMPV 227
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 229/422 (54%), Gaps = 44/422 (10%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I +++ + L D+ +++ + +CG ++ G ++ G +N + LI L
Sbjct: 115 IHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIEL 174
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVS------------------WTAIIAAFAQEWQVDMCL 221
Y KC DA +VF+EMP R+VV+ WTA+I + + + L
Sbjct: 175 YGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRAL 234
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC----QTIRMGFFSYIQVANSL 277
E++R M+ + PN+ T +LSAC+ GAL GR I + F V +L
Sbjct: 235 EVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHF----VGGAL 290
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
I+MY +CG+++EA VF M K+++++NSMI G+A HG +V A++LF ++KQ P +
Sbjct: 291 INMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSS 350
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+TF+GV+++C HGGL E G F SMAK +G++P+++HY C+VDLLGR G LEEA FI+
Sbjct: 351 VTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIR 410
Query: 397 QMPIYPNAVIWEA-----------------AESRLLLEPECAATHVQLANLYAGVRCWDQ 439
M + P+ V+ A A+S + + + T++ L+N Y+ W +
Sbjct: 411 MMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKE 470
Query: 440 AARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
AA VR M+++G++ PGCS IE+ N ++ F D + + +I L+ L ++ GY
Sbjct: 471 AAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGY 530
Query: 500 VP 501
P
Sbjct: 531 TP 532
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 22/263 (8%)
Query: 156 PYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEW 215
P IR + +V L+ + S I A K+F NV +TA+I
Sbjct: 50 PIYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSC 109
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
+ LY M NS L P+ + TS+L AC AL +GR H Q +++G S +
Sbjct: 110 YYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRI 169
Query: 276 SLISMYCKCGNVEEAVYVFNNM-----------------HG-KDIVSWNSMIAGYAQHGL 317
LI +Y KCG E+A VF+ M HG KD V W +MI G ++G
Sbjct: 170 KLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGE 229
Query: 318 AVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY-- 375
+ RA+++F M ++ V P+ +T + V+S+C G ++ G+ M KH + EL+H+
Sbjct: 230 SNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKH--RIELNHFVG 287
Query: 376 SCVVDLLGRAGLLEEARDFIKQM 398
++++ R G ++EA+ +QM
Sbjct: 288 GALINMYSRCGDIDEAQRVFEQM 310
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Query: 284 CGNVEEAVY---VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
C N+ Y +F++ ++ + ++I G I L+ +M+ + PD+
Sbjct: 74 CSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAV 133
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP 399
V+ +C ++EG+ + K GL +++L G+ G E+AR +MP
Sbjct: 134 TSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMP 192
>gi|414884271|tpg|DAA60285.1| TPA: hypothetical protein ZEAMMB73_421255 [Zea mays]
Length = 686
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 213/401 (53%), Gaps = 18/401 (4%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D + + D+ R +VD L +C +R G LA+R V +
Sbjct: 275 DYRAALGLIRDMVRGGAEVDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEIDSVVN 334
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
++IT+Y++C + A +F M +V+W ++A FA + L+R M S ++P
Sbjct: 335 AVITMYARCNDMERALMLFRTMRCPGLVAWNTMLAGFALLDDAEAASRLFREMVCSDVQP 394
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N T + L+ C L G+ H IR GF Y + NSLI MY K G + A VF
Sbjct: 395 NYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLWNSLIDMYSKSGRLSVAQNVF 454
Query: 295 NNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVE 354
+ M +D++S+ SMIAGY G + ++ F++M+ + PDAI + V+S+C H GLV+
Sbjct: 455 DTMDDRDMISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLVD 514
Query: 355 EGKVYFDSM-AKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYP----------- 402
EG+ FD M + +G+KP+++HYSC+VDL RAGLLE+A + + Q P P
Sbjct: 515 EGEELFDKMVSSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAALVGA 574
Query: 403 -----NAVIWEAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNP 456
N +I E + RLL ++ E A +V +AN+YA CW++ A VRKLM+D G+ P
Sbjct: 575 CHEQGNVIIGERSARRLLEMKTENAGHYVLIANMYAAAGCWNELATVRKLMRDMGVMKAP 634
Query: 457 GCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
G +W ++ N F D+SN EI VLD L +QM+ +
Sbjct: 635 GLAWADLGNGFTPFLVGDRSNPLAPEIYEVLDELTEQMRNM 675
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 35/306 (11%)
Query: 128 RERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVII 187
++ + DA + +C T ++ G A G +++ ++L+++Y+KC +
Sbjct: 152 KDAVPPDAFTYPKVLRACAETADLVLGRAVHVRAAAAGMDGHLFFQNALVSMYAKCGDLA 211
Query: 188 DAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSIL---- 243
A +VF+ M R+VVSW ++I+ +A Q +EL+R M+ E N T+ +I
Sbjct: 212 AARRVFDGMDNRDVVSWNSMISGYAASGQWREAVELFRQMQAEGAEANSVTWNTIAGGYI 271
Query: 244 -------------------------------SACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+AC+ +G L G+ H +RM
Sbjct: 272 QMRDYRAALGLIRDMVRGGAEVDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEIDS 331
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
V N++I+MY +C ++E A+ +F M +V+WN+M+AG+A A A LF EM+
Sbjct: 332 VVNAVITMYARCNDMERALMLFRTMRCPGLVAWNTMLAGFALLDDAEAASRLFREMVCSD 391
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
V+P+ +T + ++ C ++ G+ + + G K ++ ++D+ ++G L A+
Sbjct: 392 VQPNYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLWNSLIDMYSKSGRLSVAQ 451
Query: 393 DFIKQM 398
+ M
Sbjct: 452 NVFDTM 457
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 69/116 (59%)
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
+M+ + P+ FT+ +L AC + L GR+ H + G ++ N+L+SMY KC
Sbjct: 148 KMVDKDAVPPDAFTYPKVLRACAETADLVLGRAVHVRAAAAGMDGHLFFQNALVSMYAKC 207
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
G++ A VF+ M +D+VSWNSMI+GYA G A++LF +M + + +++T+
Sbjct: 208 GDLAAARRVFDGMDNRDVVSWNSMISGYAASGQWREAVELFRQMQAEGAEANSVTW 263
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 212/385 (55%), Gaps = 22/385 (5%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
+T + +C N+ G L +G +N+ SSLI +Y KC + +A +F+ M
Sbjct: 128 FATLINACSILANLEIGRRIHALVEVSGLGSNLVACSSLIDMYGKCNHVDEARLIFDSMC 187
Query: 198 VRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE-PNDFTFTSILSACTGSGALGQGR 256
RNVVSWT++I ++Q Q L+L++ +S L+ PN F S +SAC G+LG G+
Sbjct: 188 TRNVVSWTSMITTYSQNAQGHHALQLFKEFNHSRLDKPNHFMLCSAVSACASLGSLGSGK 247
Query: 257 SAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
H IR+G + +A++L+ MY KCG V + +F + ++ + SMI G A++G
Sbjct: 248 ITHGVVIRLGHEASDVIASALVDMYAKCGCVNYSAKIFRRIQNPSVIPYTSMIVGAAKYG 307
Query: 317 LAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHY 375
L + ++ LF+EM+ +R+KP+ ITF+GV+ +C H GLV++G DSM K+G+ P+ HY
Sbjct: 308 LGILSLQLFQEMVVRRIKPNDITFVGVLHACSHSGLVDKGLELLDSMDGKYGVTPDAKHY 367
Query: 376 SCVVDLLGRAGLLEEARDFIKQMPIYPN--AVIW-----------------EAAESRLLL 416
+C+ D+LGR G +EEA K + + + A++W EA+ +
Sbjct: 368 TCIADMLGRVGRIEEAYQLAKSVQVEGDGYAMLWGTLLSASRLYGRVDIALEASNRLIES 427
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKS 476
+ A +V L+N YA W+ A +R MK G+ PG SWIEI Y F A D S
Sbjct: 428 NQQVAGAYVTLSNAYALAGDWENAHNLRSEMKHTGVYKEPGSSWIEIKESTYLFHAGDIS 487
Query: 477 N-TRLSEILPVLDFLVDQMKTLGYV 500
T+ EIL +L L ++MK GYV
Sbjct: 488 KYTQGREILSLLRELEERMKGRGYV 512
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 132/244 (54%), Gaps = 13/244 (5%)
Query: 162 IRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCL 221
+++G + + + LI Y + I A K+F+EMP RNVVSWT+++A + + Q +M L
Sbjct: 51 VKSGLSNDTFATNHLINCYLRLFTIDHAQKLFDEMPHRNVVSWTSLMAGYVSQGQPNMAL 110
Query: 222 ELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMY 281
L+ M+ +++ PN+FTF ++++AC+ L GR H G S + +SLI MY
Sbjct: 111 CLFHQMQGTLVLPNEFTFATLINACSILANLEIGRRIHALVEVSGLGSNLVACSSLIDMY 170
Query: 282 CKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRV-KPDAITF 340
KC +V+EA +F++M +++VSW SMI Y+Q+ A+ LF+E R+ KP+
Sbjct: 171 GKCNHVDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHALQLFKEFNHSRLDKPNHFML 230
Query: 341 LGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH------YSCVVDLLGRAGLLEEARDF 394
+S+C G + GK+ HG+ L H S +VD+ + G + +
Sbjct: 231 CSAVSACASLGSLGSGKI------THGVVIRLGHEASDVIASALVDMYAKCGCVNYSAKI 284
Query: 395 IKQM 398
+++
Sbjct: 285 FRRI 288
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 104 VFDQLLDTPVVDVEKLISM-------HHDL-------HRERLKVDASFLSTAVTSCGSTR 149
+FD + VV +I+ HH L H K + L +AV++C S
Sbjct: 182 IFDSMCTRNVVSWTSMITTYSQNAQGHHALQLFKEFNHSRLDKPNHFMLCSAVSACASLG 241
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
++ G + IR G A+ + S+L+ +Y+KC + + K+F + +V+ +T++I
Sbjct: 242 SLGSGKITHGVVIRLGHEASDVIASALVDMYAKCGCVNYSAKIFRRIQNPSVIPYTSMIV 301
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQG 255
A+ + L+L++ M ++PND TF +L AC+ SG + +G
Sbjct: 302 GAAKYGLGILSLQLFQEMVVRRIKPNDITFVGVLHACSHSGLVDKG 347
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 239 FTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH 298
F + L C L S H ++ G + N LI+ Y + ++ A +F+ M
Sbjct: 30 FVAKLQTCKD---LTSATSTHSNVVKSGLSNDTFATNHLINCYLRLFTIDHAQKLFDEMP 86
Query: 299 GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKV 358
+++VSW S++AGY G A+ LF +M V P+ TF +I++C +E G+
Sbjct: 87 HRNVVSWTSLMAGYVSQGQPNMALCLFHQMQGTLVLPNEFTFATLINACSILANLEIGRR 146
Query: 359 YFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ GL L S ++D+ G+ ++EAR M N V W +
Sbjct: 147 IHALVEVSGLGSNLVACSSLIDMYGKCNHVDEARLIFDSMCT-RNVVSWTS 196
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 221/418 (52%), Gaps = 60/418 (14%)
Query: 142 VTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNV 201
V C G A + G +N + +SL+ +Y KC + DA++VFEEM R+
Sbjct: 98 VKXCAGLMCYNLGKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDA 157
Query: 202 VSW-------------------------------TAIIAAFAQEWQVDMCLELYRMMRNS 230
VSW TAI++ +A+ + LE +R M+
Sbjct: 158 VSWNTLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMV 217
Query: 231 MLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEA 290
+E ++ + S+L AC GAL G+ H + GF I V N+LI +Y K G+++E
Sbjct: 218 DIELDEISLVSVLPACAQLGALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEG 277
Query: 291 VYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHG 350
+F+ M+ +D++SW++MI G A HG A AI+LF+EM K +V+P+ ITF+G++S+C H
Sbjct: 278 RRLFHKMNERDVISWSTMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHA 337
Query: 351 GLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE- 408
GL+ EG YF+SM + ++P ++HY C+V+LLG +G L++A + IK+MP+ P++ IW
Sbjct: 338 GLLNEGLGYFESMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGL 397
Query: 409 ----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGL 452
A E L LEP+ ++ L+NLYA + WD +R+RKLM K +
Sbjct: 398 LSSSCRSHGNLEIVAIAMEHLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYM 457
Query: 453 KTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDD 510
PGCS IE+ N+V + + D S I VL LV +H+ K+DD
Sbjct: 458 NKTPGCSSIEVDNMVQEYASGDDSKPFSKAIYRVLKLLV-----------MHQSKMDD 504
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYR-MMRNSMLE----PNDFTFTSILSAC 246
+F+ + N + A+I A+ + + +++ M+ +S E P+ FTF ++ C
Sbjct: 42 LFKRVADPNAFLYNAMIRAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXC 101
Query: 247 TGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWN 306
G G+ H + G S + NSL+ MY KC ++++A VF M +D VSWN
Sbjct: 102 AGLMCYNLGKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWN 161
Query: 307 SMIAGYAQHGLAVRAIDLFEEMMKQR-------------------------------VKP 335
++I+G+ + G RA +FEE+ + ++
Sbjct: 162 TLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIEL 221
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFI 395
D I+ + V+ +C G +E GK K G ++ + ++++ + G ++E R
Sbjct: 222 DEISLVSVLPACAQLGALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLF 281
Query: 396 KQM 398
+M
Sbjct: 282 HKM 284
>gi|15228026|ref|NP_181211.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216191|sp|Q9ZQA1.1|PP188_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36730
gi|4415918|gb|AAD20149.1| hypothetical protein [Arabidopsis thaliana]
gi|330254198|gb|AEC09292.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 501
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 222/407 (54%), Gaps = 28/407 (6%)
Query: 110 DTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN 169
D+PV + I ++ ++ R +K + + +C S + G Q ++ GF +
Sbjct: 92 DSPV----ESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFD 147
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
VYVG++LI LY C+ DA KVF+EM RNVVSW +I+ A + ++++ E + M
Sbjct: 148 VYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIG 207
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
P++ T +LSAC G+ L G+ H Q + ++ +L+ MY K G +E
Sbjct: 208 KRFCPDETTMVVLLSACGGN--LSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEY 265
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCR 348
A VF M K++ +W++MI G AQ+G A A+ LF +MMK+ V+P+ +TFLGV+ +C
Sbjct: 266 ARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACS 325
Query: 349 HGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
H GLV++G YF M K H +KP + HY +VD+LGRAG L EA DFIK+MP P+AV+W
Sbjct: 326 HTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVW 385
Query: 408 -------------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLM 447
E + RL+ LEP+ + V +AN +A R W +AA VR++M
Sbjct: 386 RTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVM 445
Query: 448 KDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
K+ +K G S +E+ +RF + + I +LD Q+
Sbjct: 446 KETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQL 492
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 214/401 (53%), Gaps = 50/401 (12%)
Query: 144 SCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVS 203
+CG T + G +R+G ++ V +SLI +Y++ + A+KVF+EM R+VVS
Sbjct: 128 ACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVS 187
Query: 204 WTAIIAAFAQEWQVDMCLELY-------------------------------RMMRNSML 232
W +I+A A+ Q+ L+ R M+
Sbjct: 188 WNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGF 247
Query: 233 EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVY 292
EP+D + ++L AC GAL GR + R G + + N+L+ MY KCG +++A+
Sbjct: 248 EPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 293 VFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGG 351
+F+ M KD++SW+++I G A HG A A+ LF EM K+ +V+P+ ITF+G++S+C + G
Sbjct: 308 LFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAG 367
Query: 352 LVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-- 408
LV+EG +FD M +G++P ++HY CVVDLLGR+G + A D ++ MP+ +A +W
Sbjct: 368 LVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSL 427
Query: 409 ---------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLK 453
AAE + LEP+ V LAN+YA R W A RK ++ + ++
Sbjct: 428 LSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMR 487
Query: 454 TNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
PGCS IE+ NVV F A + ++ L + VLD L +
Sbjct: 488 KTPGCSLIEVGNVVREFVAGEGLSSELGGLAGVLDILASHL 528
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 38/266 (14%)
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRN 229
Y+ + ++ L + R + A +VF ++ N+ A+I A+AQ Q + +Y RM+R
Sbjct: 47 YLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRC 106
Query: 230 SMLEPND------FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK 283
P+ FT+ +L AC G+ AL G+ H +R G S V NSLI MY +
Sbjct: 107 PTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTR 166
Query: 284 CGNVEEAVYVFNNMHGKDIVSWN-------------------------------SMIAGY 312
G++ A VF+ M +D+VSWN +M++GY
Sbjct: 167 AGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGY 226
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
G A+D F M + +PD ++ + V+ +C G +E G+ + +HG+
Sbjct: 227 TTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTST 286
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQM 398
+ ++++ + G +++A M
Sbjct: 287 HICNALMEMYAKCGCIDQALQLFDGM 312
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 128/301 (42%), Gaps = 32/301 (10%)
Query: 111 TPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV 170
T V D + + E + D + + +C + G R G + +
Sbjct: 227 TTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTST 286
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELY-RMMRN 229
++ ++L+ +Y+KC I A ++F+ M ++V+SW+ +I A + + L+ M +
Sbjct: 287 HICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKE 346
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIR--MGFFSYIQVANSLISMYCKCGNV 287
+ PN TF +LSAC+ +G + +G S H + G ++ ++ + + G +
Sbjct: 347 GKVRPNVITFVGLLSACSYAGLVDEGLS-HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQI 405
Query: 288 EEAVYVFNNMH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGV--- 343
A+ + +M D W S+++ HG A+ E +++ ++PD + L +
Sbjct: 406 RRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVE--LEPDDVGNLVMLAN 463
Query: 344 ----------ISSCRHG------------GLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
++S R L+E G V + +A GL EL + V+D+
Sbjct: 464 VYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAGEGLSSELGGLAGVLDI 523
Query: 382 L 382
L
Sbjct: 524 L 524
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 203/363 (55%), Gaps = 18/363 (4%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
Q +++G I V ++L T+YS+ I A ++F+E + V +W A+I+ +AQ
Sbjct: 328 QGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLT 387
Query: 218 DMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSL 277
+M + L++ M + PN T TSILSAC GAL G+S H I V+ +L
Sbjct: 388 EMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTAL 447
Query: 278 ISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDA 337
I MY KCGN+ EA +F+ K+ V+WN+MI GY HG A+ LF EM+ +P +
Sbjct: 448 IDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSS 507
Query: 338 ITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIK 396
+TFL V+ +C H GLV EG F +M K+ ++P +HY+C+VD+LGRAG LE+A +FI+
Sbjct: 508 VTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIR 567
Query: 397 QMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGVRCWDQ 439
+MP+ P +W A+E L+P +V L+N+Y+ R + +
Sbjct: 568 KMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPK 627
Query: 440 AARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
AA VR+ +K + L PGC+ IE+ + F D+S+++ + I L+ L +M+ +GY
Sbjct: 628 AASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGY 687
Query: 500 VPE 502
E
Sbjct: 688 QSE 690
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 142/288 (49%), Gaps = 1/288 (0%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+ + D+ + +++D++ ++T + + + ++ G QCLA++ GF + YV + LI++
Sbjct: 189 VQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISV 248
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTF 239
+SKC + A +F + ++VS+ A+I+ F+ + + ++ +R + S + T
Sbjct: 249 FSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTM 308
Query: 240 TSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHG 299
++ + G L ++ G V+ +L ++Y + ++ A +F+
Sbjct: 309 VGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSE 368
Query: 300 KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
K + +WN+MI+GYAQ GL AI LF+EMM P+ +T ++S+C G + GK
Sbjct: 369 KTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSV 428
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ L+ + + ++D+ + G + EA + N V W
Sbjct: 429 HQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLF-DLTSEKNTVTW 475
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 97/184 (52%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMC 220
A+ GF +N++V S+L+ LY K + A KVF++MP R+ V W +I + D
Sbjct: 129 AVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDS 188
Query: 221 LELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISM 280
+++++ M + + T ++L A + G C +++GF V LIS+
Sbjct: 189 VQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISV 248
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
+ KC +V+ A +F + D+VS+N++I+G++ +G A+ F E++ + + T
Sbjct: 249 FSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTM 308
Query: 341 LGVI 344
+G+I
Sbjct: 309 VGLI 312
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 189 AYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTG 248
A +F +P ++ + +I F+ +++N+ L P++FT+ +SA
Sbjct: 59 ARALFFSVPKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPD 118
Query: 249 SGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSM 308
G H + GF S + VA++L+ +YCK V A VF+ M +D V WN+M
Sbjct: 119 DNL---GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTM 175
Query: 309 IAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISS 346
I G ++ ++ +F++M+ Q V+ D+ T V+ +
Sbjct: 176 ITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPA 213
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E IS+ ++ + +++ +++C + G L N+YV ++L
Sbjct: 388 EMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTAL 447
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
I +Y+KC I +A ++F+ +N V+W +I + D L+L+ M + +P+
Sbjct: 448 IDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSS 507
Query: 237 FTFTSILSACTGSGALGQG 255
TF S+L AC+ +G + +G
Sbjct: 508 VTFLSVLYACSHAGLVREG 526
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 216/405 (53%), Gaps = 19/405 (4%)
Query: 117 EKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSL 176
E+ +S+ ++H D L + + R++ G I+ G ++ V SSL
Sbjct: 158 EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSL 217
Query: 177 ITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPND 236
+Y + + D V MPVRN+V+W +I AQ + L LY+MM+ S PN
Sbjct: 218 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 277
Query: 237 FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNN 296
TF ++LS+C+ GQG+ H + I++G S + V +SLISMY KCG + +A F+
Sbjct: 278 ITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE 337
Query: 297 MHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEE 355
+D V W+SMI+ Y HG AI+LF M +Q ++ + + FL ++ +C H GL ++
Sbjct: 338 REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDK 397
Query: 356 GKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESR- 413
G FD M K+G KP L HY+CVVDLLGRAG L++A I+ MPI + VIW+ S
Sbjct: 398 GLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSAC 457
Query: 414 ----------------LLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPG 457
L ++P +A +V LAN++A + W + VRK M+DK +K G
Sbjct: 458 NIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAG 517
Query: 458 CSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPE 502
SW E V++F+ D+S ++ EI L L +MK GY P+
Sbjct: 518 ISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPD 562
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 150/326 (46%), Gaps = 36/326 (11%)
Query: 102 SNVFDQLLDTPVVDVEKLIS---MHHDLHRERLKV--DASFLSTAVTSCGSTRNIRGGAP 156
S+V L P + L S + R RL + + S + + SC + +++ G
Sbjct: 6 SSVVRPLSVDPATAIATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQ 65
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSK---------------------CRVIIDAY----- 190
CL + +GF ++ ++ + L+++YSK ++I+ Y
Sbjct: 66 LHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGD 125
Query: 191 -----KVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSA 245
KVF+EMP R + +W A+IA Q + L L+R M P+++T S+ S
Sbjct: 126 LVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSG 185
Query: 246 CTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSW 305
G ++ G+ H TI+ G + V +SL MY + G +++ V +M +++V+W
Sbjct: 186 SAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAW 245
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
N++I G AQ+G + L++ M +P+ ITF+ V+SSC + +G+ K
Sbjct: 246 NTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK 305
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEA 391
G + S ++ + + G L +A
Sbjct: 306 IGASSVVAVVSSLISMYSKCGCLGDA 331
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 80/204 (39%), Gaps = 32/204 (15%)
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVF 294
N FT + +CT +L G+ HC + GF S + N L+SMY K G+ AV V+
Sbjct: 43 NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102
Query: 295 NNMHGKDIVS-------------------------------WNSMIAGYAQHGLAVRAID 323
M K+ +S WN+MIAG Q +
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLS 162
Query: 324 LFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLG 383
LF EM PD T V S V G+ K+GL+ +L S + +
Sbjct: 163 LFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM 222
Query: 384 RAGLLEEARDFIKQMPIYPNAVIW 407
R G L++ I+ MP+ N V W
Sbjct: 223 RNGKLQDGEIVIRSMPV-RNLVAW 245
>gi|297597140|ref|NP_001043491.2| Os01g0600400 [Oryza sativa Japonica Group]
gi|53791399|dbj|BAD53436.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|53793537|dbj|BAD52986.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222618803|gb|EEE54935.1| hypothetical protein OsJ_02490 [Oryza sativa Japonica Group]
gi|255673429|dbj|BAF05405.2| Os01g0600400 [Oryza sativa Japonica Group]
Length = 348
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 203/343 (59%), Gaps = 19/343 (5%)
Query: 150 NIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIA 209
++R G +++GF + V L+ +Y + +A VF+ + R+V SWT +++
Sbjct: 2 DLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMS 61
Query: 210 AFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS 269
+A+ + + +E +R M PND T + LS C+ LG G H TI+ G+ S
Sbjct: 62 TYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNS 121
Query: 270 YIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
+ V+++L+ MY KCGN+ +A +F+ D+V WN++I GYAQHG +A++ F+EM+
Sbjct: 122 SV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMI 180
Query: 330 KQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLL 388
+ PD ITF+GV+S+C H GL++EG+ YF ++ +G+ P L+HY+C+VD+L +AG L
Sbjct: 181 DEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKL 240
Query: 389 EEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLY 431
EA I +MP+ P+A +W+ AAE +P+ ++ + L+N+Y
Sbjct: 241 AEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIY 300
Query: 432 AGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAED 474
A ++ W+ A++R ++ D+G+K PGCSWIEI ++ F ++D
Sbjct: 301 ADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLSQD 343
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 217/389 (55%), Gaps = 36/389 (9%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
L +RT + ++LIT +++ + DA +F+EMP RN VSW+A++ + Q
Sbjct: 149 LLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGRE 208
Query: 220 CLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAH----CQTIRMGFFSYIQVAN 275
L ++ M+ + P+D +L+AC GAL QG+ H IRM F +
Sbjct: 209 ALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVF----LGT 264
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
+L+ MY KCG V+ + VF M K++++W +MI G A HG ++ LF +M VKP
Sbjct: 265 ALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKP 324
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
D I F+G + +C H GLV++G+ F+SM +G+KP+++HY C+VDLL R GLL EARD
Sbjct: 325 DDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDM 384
Query: 395 IKQMPIYPNAVIWEA--AESR---------------LLLEPECAATHVQLANLYAGVRCW 437
+++MP+ P+A+IW A A R + LEP+ + +V L N+Y+
Sbjct: 385 VEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRH 444
Query: 438 DQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTL 497
A +R LM++KG++ PGCS +EI V+++F D S+ R+ +IL + +D L
Sbjct: 445 ASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKW-YEIDSRIRL 503
Query: 498 --GYVP-------EVHEEKVDDASHKRTE 517
GYVP ++ EE+++ A + +E
Sbjct: 504 EEGYVPDKKEVLLDIEEEEMESALSRHSE 532
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 36/229 (15%)
Query: 206 AIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGR----SAHCQ 261
A+I A A + L LY + + L P T S+L + S A+ R + H
Sbjct: 58 ALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAH 117
Query: 262 TIRMGFFSYIQVA--------------------------------NSLISMYCKCGNVEE 289
+R+G ++ V N+LI+ + + G V +
Sbjct: 118 AVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVAD 177
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A +F+ M ++ VSW++M+ GY Q G A+ +F +M Q V+PD +GV+++C
Sbjct: 178 ARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQ 237
Query: 350 GGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
G +E+GK + + ++ + + +VD+ + G ++ + + M
Sbjct: 238 LGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGM 286
>gi|297596280|ref|NP_001042300.2| Os01g0197500 [Oryza sativa Japonica Group]
gi|255672971|dbj|BAF04214.2| Os01g0197500 [Oryza sativa Japonica Group]
Length = 906
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/361 (37%), Positives = 194/361 (53%), Gaps = 26/361 (7%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP------VRNVVSWTAIIAAFAQE 214
A R N ++LIT Y+ R+ A V +M NVVSW+A+I FA
Sbjct: 542 AFRDATAKNTVTWNTLITSYAAARLCDKALDVLAQMEQIGGTVAPNVVSWSAVIGGFASS 601
Query: 215 WQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVA 274
D LEL+R M+ L PN T ++LSAC AL GR H ++ + V
Sbjct: 602 GDTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRHSLVE 661
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
N LI+MY KCG V A VF+ M +D++SWNSM+AGY HGL A+ LF +M V+
Sbjct: 662 NGLINMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGLCDEALALFTDMAGATVE 721
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARD 393
PD +TF+ V+S+C H G V EG+ FD M + H + P ++HY+C+V LLGRAGLL +A +
Sbjct: 722 PDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMVYLLGRAGLLRDASE 781
Query: 394 FIKQMPIYPNAVIWEA-------------AESR----LLLEPECAATHVQLANLYAGVRC 436
++ MP+ P+ +W A AE+ L E + H+ + NLYA
Sbjct: 782 LVETMPVRPDLCVWGALLNSCRIHGDAAMAEATIANVLQSEDQSTGNHMLITNLYAMCGM 841
Query: 437 WDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSN--TRLSEILPVLDFLVDQM 494
WD++ +VR + K+ GL+ NPG SWIE+ N V F A T ++ +LD L +M
Sbjct: 842 WDESKKVRVMTKEAGLRKNPGQSWIEVDNKVVAFAAGSAPPNLTGAEDVFGMLDDLYAEM 901
Query: 495 K 495
+
Sbjct: 902 E 902
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 161 AIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPV---------------------- 198
A+ G A V ++ YS+ DA +VF+ MP
Sbjct: 371 ALHLGLHAQHDVAGQILAAYSRLGRAADARRVFDAMPPGRTTFHWNALISAYSSGCDPDA 430
Query: 199 --------------RNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ V+WTA+++A A+ + L+L+ M+ S E N + LS
Sbjct: 431 ARDAFARMAAAGARPDAVTWTALLSAHARSGKHADVLQLFGEMQRSGCEGNAESMAVALS 490
Query: 245 ACTGSG--ALGQGRSAH-CQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKD 301
AC +G AL +G++ H C ++ Y+ V NSLI MY K G +++A F + K+
Sbjct: 491 ACPYAGDLALAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFRDATAKN 550
Query: 302 IVSWNSMIAGYAQHGLAVRAIDLFEEM--MKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
V+WN++I YA L +A+D+ +M + V P+ +++ VI G +
Sbjct: 551 TVTWNTLITSYAAARLCDKALDVLAQMEQIGGTVAPNVVSWSAVIGGFASSGDTDRALEL 610
Query: 360 FDSMAKHGLKPELDHYSCV----VDLL 382
F M + L P + + V VDLL
Sbjct: 611 FRRMQQQWLSPNVVTMATVLSACVDLL 637
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 102/209 (48%), Gaps = 2/209 (0%)
Query: 115 DVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGS 174
D ++ + + + ++ L + ++T +++C +R G A++ + V +
Sbjct: 603 DTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRHSLVEN 662
Query: 175 SLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP 234
LI +Y+KC + A KVF+ M R+++SW +++A + D L L+ M + +EP
Sbjct: 663 GLINMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGLCDEALALFTDMAGATVEP 722
Query: 235 NDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFS-YIQVANSLISMYCKCGNVEEAVYV 293
+ TF ++LSAC +G + +GR + +R S ++ ++ + + G + +A +
Sbjct: 723 DGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMVYLLGRAGLLRDASEL 782
Query: 294 FNNMHGK-DIVSWNSMIAGYAQHGLAVRA 321
M + D+ W +++ HG A A
Sbjct: 783 VETMPVRPDLCVWGALLNSCRIHGDAAMA 811
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 5/198 (2%)
Query: 197 PVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDFTFTSILSACTGSGALGQG 255
P + V W ++ A + D+ L LYR MR S PN +T L A
Sbjct: 308 PTTSAVPWNRLLRAHLGRSRGDLALALYRRMRALSPALPNSYTLPLALRAAASPRV---A 364
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMH-GKDIVSWNSMIAGYAQ 314
+ H + +G + VA +++ Y + G +A VF+ M G+ WN++I+ Y+
Sbjct: 365 SAVHAHALHLGLHAQHDVAGQILAAYSRLGRAADARRVFDAMPPGRTTFHWNALISAYSS 424
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDH 374
A D F M +PDA+T+ ++S+ G + F M + G + +
Sbjct: 425 GCDPDAARDAFARMAAAGARPDAVTWTALLSAHARSGKHADVLQLFGEMQRSGCEGNAES 484
Query: 375 YSCVVDLLGRAGLLEEAR 392
+ + AG L A+
Sbjct: 485 MAVALSACPYAGDLALAK 502
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 232/451 (51%), Gaps = 54/451 (11%)
Query: 114 VDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVG 173
+D + L LH + D +++ +++C + N+R G +RT N V
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335
Query: 174 SSLITLYSK------CRVIID---------------------------AYKVFEEMPVRN 200
++LI+ Y+K R I+D A ++F M R+
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395
Query: 201 VVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHC 260
VV+WTA+I + Q + D ++L+R M EPN +T ++LS C L G+ HC
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455
Query: 261 QTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM-HGKDIVSWNSMIAGYAQHGLAV 319
+ IR V+N++I+MY + G+ A +F+ + K+ ++W SMI AQHG
Sbjct: 456 RAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515
Query: 320 RAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCV 378
A+ LFEEM++ V+PD IT++GV+S+C H G V EGK Y+D + +H + PE+ HY+C+
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 575
Query: 379 VDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECA 421
VDLL RAGL EA++FI++MP+ P+A+ W AAE L ++P +
Sbjct: 576 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 635
Query: 422 ATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLS 481
+ +AN+Y+ W AAR+ K K+K ++ G SW I + ++ F A+D + +
Sbjct: 636 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 695
Query: 482 EILPVLDFLVDQMKTLGYVPEVHE--EKVDD 510
+ + + +++K G+VP++ VDD
Sbjct: 696 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDD 726
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 132/265 (49%), Gaps = 40/265 (15%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMR 228
NV+ +SL+++++K + DA VF EMP R+ VSWT ++ + + ++ M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 229 NSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
P FT T++LS+C + A GR H +++G S + VANS+++MY KCG+ E
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAE 216
Query: 289 EAVYV-------------------------------FNNMHGKDIVSWNSMIAGYAQHGL 317
A V F +M G+ IVSWN+MIAGY Q+GL
Sbjct: 217 TASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGL 276
Query: 318 AVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYS 376
+A+ LF M+ + + PD T V+S+C + G V GK + + L+ E+ + S
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK----QVHAYILRTEMAYNS 332
Query: 377 CVVDLL----GRAGLLEEARDFIKQ 397
V + L ++G +E AR + Q
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQ 357
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 138/335 (41%), Gaps = 65/335 (19%)
Query: 138 LSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMP 197
L+ ++SC T+ G ++ G + V V +S++ +Y KC A VFE MP
Sbjct: 167 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMP 226
Query: 198 VRNV-------------------------------VSWTAIIAAFAQEWQVDMCLELY-R 225
VR+V VSW A+IA + Q L+L+ R
Sbjct: 227 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSR 286
Query: 226 MMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCG 285
M+ S + P++FT TS+LSAC G + G+ H +R QV N+LIS Y K G
Sbjct: 287 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 346
Query: 286 NVEEAVYV---------------------------------FNNMHGKDIVSWNSMIAGY 312
+VE A + F M+ +D+V+W +MI GY
Sbjct: 347 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 406
Query: 313 AQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
Q+G AIDLF M+ +P++ T V+S C ++ GK + L+
Sbjct: 407 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSS 466
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ ++ + R+G AR Q+ + W
Sbjct: 467 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITW 501
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%)
Query: 275 NSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVK 334
NSL+SM+ K G + +A VF M +D VSW M+ G + G AI +M
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161
Query: 335 PDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDF 394
P T V+SSC G+ + K GL + + V+++ G+ G E A
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221
Query: 395 IKQMPI 400
++MP+
Sbjct: 222 FERMPV 227
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 217/396 (54%), Gaps = 24/396 (6%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
AS LS A GS +I G + G + VG++LI +YSKC ++ A F
Sbjct: 345 ASLLSVA----GSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFI 400
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
+ VSWTA+I Q Q + L+L+ MR + L P+ TF+S + A + +G
Sbjct: 401 NKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGL 460
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
GR H IR G S + ++L+ MY KCG ++EA+ F+ M ++ +SWN++I+ YA
Sbjct: 461 GRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAH 520
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELD 373
+G A AI +FE M+ KPD++TFL V+S+C H GL EE YF+ M ++G+ P +
Sbjct: 521 YGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKE 580
Query: 374 HYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLL 416
HYSCV+D LGR G ++ ++ + +MP + +IW AAE +
Sbjct: 581 HYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSM 640
Query: 417 EPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKS 476
A +V L+N++A W+ AA V+K+M+D+GL+ G SW+E+ + VY F + D++
Sbjct: 641 GSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQT 700
Query: 477 NTRLSEILPVLDFLVDQMKTLGYVPEVH--EEKVDD 510
N ++EI L+ L +M GY P+ ++VDD
Sbjct: 701 NPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDD 736
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 122/242 (50%), Gaps = 1/242 (0%)
Query: 168 ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM 227
+NV+V +SL+ YSKC + + K+F EM R+ VS+ +IA +A + L L+R M
Sbjct: 273 SNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREM 332
Query: 228 RNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNV 287
++ + + S+LS +G G+ H Q + +G S V N+LI MY KCG +
Sbjct: 333 QSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGML 392
Query: 288 EEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+ A F N + K VSW +MI G Q+G A+ LF M + + PD TF I +
Sbjct: 393 DAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKAS 452
Query: 348 RHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW 407
+ ++ G+ + + G + S ++D+ + G L+EA +MP N++ W
Sbjct: 453 SNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP-ERNSISW 511
Query: 408 EA 409
A
Sbjct: 512 NA 513
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 144/295 (48%), Gaps = 12/295 (4%)
Query: 111 TPVVDVEKLISMHHDLHRERLKVDASFLSTAVT---SCGSTRNIRGGAPYQCLAIRTGFI 167
P +S+ D+ RE + D ++T + + G T A A++ G +
Sbjct: 112 APGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLL 171
Query: 168 -ANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRM 226
+NV V ++L+ Y K ++ A +VF+EMP R+ V++ A++ ++E L+L+
Sbjct: 172 HSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAA 231
Query: 227 MRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGN 286
MR L FTF+++L+ TG G L GR H R S + V NSL+ Y KC
Sbjct: 232 MRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSSNVFVNNSLLDFYSKCDC 290
Query: 287 VEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF---LGV 343
++E +F+ M +D VS+N MIAGYA + A + LF EM A+ + L V
Sbjct: 291 LDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSV 350
Query: 344 ISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEAR-DFIKQ 397
S H G+ GK + GL E + ++D+ + G+L+ A+ +FI +
Sbjct: 351 AGSVPHIGI---GKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINK 402
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%)
Query: 169 NVYVGSSLITLYSKCRVIIDAYKVFEEMP--VRNVVSWTAIIAAFAQE--WQVDMCLELY 224
N + + +++ YS+ + A+ +F P +R+ V+WT +I AFA + + L+
Sbjct: 65 NAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLF 124
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQG---RSAHCQTIRMGFF-SYIQVANSLISM 280
R M + P+ T ++L+ SG S H +++G S + V N+L+
Sbjct: 125 RDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDA 184
Query: 281 YCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITF 340
YCK G + A VF M +D V++N+M+ G ++ G A+DLF M ++ + TF
Sbjct: 185 YCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTF 244
Query: 341 LGVIS 345
V++
Sbjct: 245 STVLT 249
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 194/340 (57%), Gaps = 19/340 (5%)
Query: 174 SSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLE 233
++LI+ +++ + A ++F MP + VVSWTA+++ + +E++R M+ E
Sbjct: 187 NTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFE 246
Query: 234 PNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYV 293
P+D + ++L AC GAL GR + + G I + N+L+ MY KCG +EEA+ +
Sbjct: 247 PDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQL 306
Query: 294 FNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ-RVKPDAITFLGVISSCRHGGL 352
F+ M KD++SW++ I G A HG A A+ LFE M ++ RV P+ ITF+G++S+C H GL
Sbjct: 307 FHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGL 366
Query: 353 VEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWE--- 408
++EG YFD M ++G++P ++HY CVVDLLGR+G ++ A D I MPI P+ IW
Sbjct: 367 LDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLL 426
Query: 409 --------------AAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKT 454
AAE + LEPE V LAN+YA W A RK ++ + +
Sbjct: 427 SACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRSTRK 486
Query: 455 NPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
PGCS IE+ NVV F A + L I ++D L Q+
Sbjct: 487 TPGCSMIEVDNVVREFVAGEDLGPELGGIAAIIDILASQL 526
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 160 LAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDM 219
LA+R + YV + ++ + + A +VF +P N+ A+I A+AQ
Sbjct: 32 LAVRLCLSQSSYVATQIVHVCNGHGRAAHAARVFAHVPAPNLHLHNAMIKAYAQNHLHRD 91
Query: 220 CLELYRMMRNSMLEPND---------FTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY 270
+E+Y M + +P+ FT+ +L AC G A GR H R G S+
Sbjct: 92 AVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAASQLGRQVHAHVARSGCESH 151
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMI--------------------- 309
V NSLI MY +CG++ A VF+ M KD VSWN++I
Sbjct: 152 AIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNTLISAHARMGQMRKARELFHSMPD 211
Query: 310 ----------AGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVY 359
+GY G A+++F +M + +PD ++ + V+ +C G +E G+
Sbjct: 212 KTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIVAVLPACAQLGALELGRWI 271
Query: 360 FDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQM 398
+ KHG+ ++ + ++++ + G +EEA M
Sbjct: 272 YAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQLFHGM 310
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 125/300 (41%), Gaps = 30/300 (10%)
Query: 111 TPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANV 170
T V D + + + E + D + + +C + G + G + +
Sbjct: 225 TAVGDFAGAVEVFRQMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKI 284
Query: 171 YVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMM-RN 229
Y+ ++L+ +Y+KC I +A ++F M ++V+SW+ I A + ++L+ +M R
Sbjct: 285 YICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDRE 344
Query: 230 SMLEPNDFTFTSILSACTGSGALGQG-RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVE 288
+ PN TF +LSAC+ +G L +G R G ++ ++ + + G ++
Sbjct: 345 GRVMPNGITFVGLLSACSHAGLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQ 404
Query: 289 EAVYVFNNMH-GKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFL------ 341
A+ M D W S+++ H A+ E +++ ++P+ + L
Sbjct: 405 RALDTIGGMPIPPDGKIWGSLLSACRSHSDVDTAVVAAERLVE--LEPEDVGNLVMLANV 462
Query: 342 -------GVISSCRHG------------GLVEEGKVYFDSMAKHGLKPELDHYSCVVDLL 382
G ++S R ++E V + +A L PEL + ++D+L
Sbjct: 463 YAAAGRWGNVASTRKEIRSRSTRKTPGCSMIEVDNVVREFVAGEDLGPELGGIAAIIDIL 522
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 229/412 (55%), Gaps = 24/412 (5%)
Query: 125 DLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLY--SK 182
D+ + + D +T +++C N G L I+ G V + +++I +Y S
Sbjct: 295 DMQQFGFEPDIYTYTTIISACSHKDN---GKSLHGLVIKRGLEQLVPICNAVIAMYLESS 351
Query: 183 CRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSI 242
+ DA VF M ++ VSW +I+ F+Q + L+L+ MR ++++ + + F+++
Sbjct: 352 SNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAV 411
Query: 243 LSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
L +C+ L G+ H T++ GF S VA+SLI MY KCG +E+A F
Sbjct: 412 LRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSS 471
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
++WNS++ YAQHG A+ LF +M ++VK D ITF+ +++C H GLVE+G+ S
Sbjct: 472 ITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKS 531
Query: 363 MAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-------------- 407
MA +G+ P ++HY+C VDL GRAG L+EA+ I+ MP P+A++W
Sbjct: 532 MASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIE 591
Query: 408 ---EAAESRLLLEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIM 464
+ A L LEPE T+V L+N+Y ++ WD+ A + +LM+++ +K PG SWIE+
Sbjct: 592 LAAQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVK 651
Query: 465 NVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVPEVHEEKVDDASHKRT 516
N V+ F A+D+ ++ EI +L+ L++ +K L V + +DD + T
Sbjct: 652 NEVHAFIADDRCHSHFEEIYQILEQLMEDIKWLDSVAG-SDSLLDDVDYSYT 702
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G L ++ G+ +VY GS+L+ +Y+KC + DA+ VF+ +P RN VSW A+IA F
Sbjct: 121 GQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVL 180
Query: 214 EWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQV 273
E D L R M + +D TF+ +L+ HC+ I+ G V
Sbjct: 181 EGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTV 240
Query: 274 ANSLISMYCKCGNVEEAVYVFNNMHG-KDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
N+ I+ Y +CG++E+A VF+ G +D+V+WNSM+A + H A LF +M +
Sbjct: 241 CNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFG 300
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLK 369
+PD T+ +IS+C H + GK + K GL+
Sbjct: 301 FEPDIYTYTTIISACSHK---DNGKSLHGLVIKRGLE 334
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 140/270 (51%), Gaps = 6/270 (2%)
Query: 126 LHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRV 185
+ E +++D S +T + + C I+ G + V ++ IT YS+C
Sbjct: 194 MEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGS 253
Query: 186 IIDAYKVFE-EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILS 244
+ DA +VF+ + R++V+W +++AAF + + +L+ M+ EP+ +T+T+I+S
Sbjct: 254 LEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIIS 313
Query: 245 ACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCK--CGNVEEAVYVFNNMHGKDI 302
AC+ G+S H I+ G + + N++I+MY + ++E+A+ VF++M KD
Sbjct: 314 ACSHK---DNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDR 370
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
VSWNS++ G++Q G + A+ LF M V D F V+ SC ++ G+
Sbjct: 371 VSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVL 430
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEAR 392
K G + S ++ + + G++E+AR
Sbjct: 431 TVKSGFESNDFVASSLIFMYSKCGMIEDAR 460
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 14/266 (5%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRV--IIDAYKVFEEMPVRNVVSWTAIIAAFAQEW 215
C I+ G A++Y +++++ Y++C + A +F+EM R+ V+W +I+ +
Sbjct: 22 HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81
Query: 216 QVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVAN 275
+ ELY+ M++ L P+ +TF SIL + L G+ H ++MG+ ++ +
Sbjct: 82 SLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGS 141
Query: 276 SLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKP 335
+L+ MY KC V +A VF + ++ VSWN++IAG+ G A L M ++ V+
Sbjct: 142 ALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRL 201
Query: 336 DAITFLGVISSCRHGGLVEEGKVYFDSMA------KHGLKPELDHYSCVVDLLGRAGLLE 389
D TF +++ L++E K Y +M KHG++ + + + + G LE
Sbjct: 202 DDGTFSPLLT------LLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLE 255
Query: 390 EARDFIKQMPIYPNAVIWEAAESRLL 415
+A + V W + + L
Sbjct: 256 DAERVFDGAVGSRDLVTWNSMLAAFL 281
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 259 HCQTIRMGFFSYIQVANSLISMYCKC--GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHG 316
HCQTI++G + I N+++S Y +C G + A +F+ M +D V+WN+MI+GY G
Sbjct: 22 HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81
Query: 317 LAVRAIDLFEEMMKQRVKPDAITF----LGVISSCRHGGLVEEGKVYFDSMAKHGLKPEL 372
A +L++ M + PDA TF GV +CR ++ G+ + K G + +
Sbjct: 82 SLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACR----LDVGQQVHSLIVKMGYEEHV 137
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLLEPE 419
S ++D+ + + +A K +P N+V W A + +LE +
Sbjct: 138 YAGSALLDMYAKCERVRDAFMVFKCIP-RRNSVSWNALIAGFVLEGD 183
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 214/375 (57%), Gaps = 25/375 (6%)
Query: 152 RGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAF 211
RG A ++ +A GF+A+++V + LI +Y+KCR + DA VFE + R+V++WTA++AA+
Sbjct: 176 RGRALHRRIAC-CGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAY 234
Query: 212 AQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYI 271
A L+++ +M +EP + TF +++ C G GR H I + +
Sbjct: 235 ALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVH-GVIDARSEANV 293
Query: 272 QVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQ 331
V N+LI+MY KC + +EA VF+ M KDI++WNSMIA Y Q+G +A+++++ M +
Sbjct: 294 CVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQES 353
Query: 332 R-----VKPDAITFLGVISSCRHGGLVEEG-KVYFDSMAKHGLKPELDHYSCVVDLLGRA 385
R + D ITF+GV+ +C H GLV++ K+Y + +G KP C++DLLGRA
Sbjct: 354 RMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRA 413
Query: 386 GLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLLLEPECAATHVQLA 428
G L+EA +FI MP +P+ IW AA+ + L P + ++V L+
Sbjct: 414 GWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVALS 473
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
NLYA WD AR+RKLM +G+ G S IEI V++ F A D S+ R EI L
Sbjct: 474 NLYALAERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELR 533
Query: 489 FLVDQMKTLGYVPEV 503
+ ++ GYVP++
Sbjct: 534 RIEGVIRERGYVPDI 548
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 109/213 (51%)
Query: 135 ASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFE 194
A L+ + CGS I G + GF ++ Y+ + L+ +Y KC + A VF
Sbjct: 57 AEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFH 116
Query: 195 EMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQ 254
P RNV SWT ++AAFA L L +M + PN TF +L A L +
Sbjct: 117 ITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDR 176
Query: 255 GRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQ 314
GR+ H + GF + I VAN LI+MY KC ++ +A VF ++ + +++W +++A YA
Sbjct: 177 GRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYAL 236
Query: 315 HGLAVRAIDLFEEMMKQRVKPDAITFLGVISSC 347
+G A+ +F M V+P +TF+ V+ C
Sbjct: 237 NGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVC 269
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 85/167 (50%)
Query: 225 RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKC 284
+++ + + P+ L C A+ +G+ H + GF S + N L+ MY KC
Sbjct: 46 QLLEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKC 105
Query: 285 GNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVI 344
G+++ A VF+ +++ SW M+A +A +G + A++L E M + + P++ITF+ ++
Sbjct: 106 GSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELL 165
Query: 345 SSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEA 391
+ ++ G+ +A G ++ +C++++ + L +A
Sbjct: 166 GAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADA 212
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 263/529 (49%), Gaps = 45/529 (8%)
Query: 26 IIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDS 85
+++RSF ++Q ++ +++ AL + P S E+H R+ + L D D
Sbjct: 24 LLHRSF--HLVRQCATPEAIVSALLIAVNSCPSI--SNCREIHARVFKSLLYRDGFIGDQ 79
Query: 86 QKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS-----MHHDL-------HRERLKV 133
++ G + +FD + +V LIS +H L +K
Sbjct: 80 LVTCYNKLGYAED--ALKLFDDMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKP 137
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+ + + +++C + G I+ G V V +SLI +Y K + A ++F
Sbjct: 138 NEVTILSMISACNGA--LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLF 195
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
E +P N VSW +IIAA ++ + MR +E ++ T ++L AC G
Sbjct: 196 EAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGK 255
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
S H GF + I +A +L+ Y K G + + VF + D V+W +M+AGYA
Sbjct: 256 LAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYA 315
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPEL 372
HGL AI LFE M + ++PD +TF ++S+C H GLV EGK YF+ M++ +G++P +
Sbjct: 316 AHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRV 375
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLL 415
DHYSC+VDLLGR GLL +A + I+ MP+ PNA +W E AE +
Sbjct: 376 DHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLIN 435
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
+EP ++ L+N+Y+ R W AA+VR L+K++GLK PG S IE N + F D+
Sbjct: 436 MEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDR 495
Query: 476 SNTRLSEILPVLDFLVDQMKTLGY-------VPEVHEEKVDDASHKRTE 517
S+ +I L+ L+ +++ GY + +V EE +D +K +E
Sbjct: 496 SHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSE 544
>gi|449461643|ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 220/411 (53%), Gaps = 25/411 (6%)
Query: 110 DTPVVDVEKLISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIAN 169
D+P ++ IS+ ++ R ++ + + +C + ++ G + +AI+ G +
Sbjct: 110 DSP----QEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAIKCGLDLD 165
Query: 170 VYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN 229
VYV ++LI Y C+ + A KVF+EM R +VSW A+I A + + D ++ + M N
Sbjct: 166 VYVRNTLIYFYGSCKRMSGARKVFDEMTERTLVSWNAVITACVENFCFDEAIDYFLKMGN 225
Query: 230 SMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEE 289
EP++ T ILSAC G L GR H Q + G +Q+ + + MY K G+V
Sbjct: 226 HGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFVDMYAKSGDVGC 285
Query: 290 AVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRH 349
A +VFN + K + +W++MI G AQHG A AI+LF MM + P+ +TF+GV+ +C H
Sbjct: 286 ARHVFNCLKQKSVWTWSAMILGLAQHGFANEAIELFTNMMSSPIVPNHVTFIGVLCACSH 345
Query: 350 GGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW- 407
GLV++ YF+ M + +G+KP + HY +VD+LGRAG ++EA + I MP+ P+ ++W
Sbjct: 346 AGLVDKSYHYFNLMERVYGIKPMMIHYGSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWR 405
Query: 408 ------------------EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMK 448
E A RLL LEP+ V +AN +A + W QAA R+ MK
Sbjct: 406 TLLSACSGRDVNGGAEVAEEARKRLLELEPKRGGNVVMVANKFAELGMWKQAADYRRTMK 465
Query: 449 DKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGY 499
D+G+K G S IE+ + +F + S I +LD L M+ +
Sbjct: 466 DRGIKKMAGESCIELGGSLRKFFSGFDSRAAPDGIYDLLDGLNLHMQLTNF 516
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%)
Query: 202 VSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQ 261
+ W II ++ + L+ MR + PN+ TF +L AC L +G+ H
Sbjct: 97 MPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAI 156
Query: 262 TIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRA 321
I+ G + V N+LI Y C + A VF+ M + +VSWN++I ++ A
Sbjct: 157 AIKCGLDLDVYVRNTLIYFYGSCKRMSGARKVFDEMTERTLVSWNAVITACVENFCFDEA 216
Query: 322 IDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHYSCVVDL 381
ID F +M +PD T + ++S+C G + G+ + G+ + + VD+
Sbjct: 217 IDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFVDM 276
Query: 382 LGRAGLLEEAR 392
++G + AR
Sbjct: 277 YAKSGDVGCAR 287
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDS 362
+ WN +I GY+ AI LF EM ++ V+P+ +TF ++ +C ++EGK +
Sbjct: 97 MPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAI 156
Query: 363 MAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMP----IYPNAVIWEAAES 412
K GL ++ + ++ G + AR +M + NAVI E+
Sbjct: 157 AIKCGLDLDVYVRNTLIYFYGSCKRMSGARKVFDEMTERTLVSWNAVITACVEN 210
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 263/529 (49%), Gaps = 45/529 (8%)
Query: 26 IIYRSFCSQKLKQISSSKSLHKALRVLDIISPRTRDSTKTEVHLRLIQDFLQTDSKHLDS 85
+++RSF ++Q ++ +++ AL + P S E+H R+ + L D D
Sbjct: 24 LLHRSF--HLVRQCATPEAIVSALLIAVNSCPSI--SNCREIHARVFKSLLYRDGFIGDQ 79
Query: 86 QKFNHDFTGTNSTFGSSNVFDQLLDTPVVDVEKLIS-----MHHDL-------HRERLKV 133
++ G + +FD + +V LIS +H L +K
Sbjct: 80 LVTCYNKLGYAED--ALKLFDDMPHKDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKP 137
Query: 134 DASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVF 193
+ + + +++C + G I+ G V V +SLI +Y K + A ++F
Sbjct: 138 NEVTILSMISACSGA--LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLF 195
Query: 194 EEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALG 253
E +P N VSW +IIAA ++ + MR +E ++ T ++L AC G
Sbjct: 196 EAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGK 255
Query: 254 QGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYA 313
S H GF + I +A +L+ Y K G + + VF + D V+W +M+AGYA
Sbjct: 256 LAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYA 315
Query: 314 QHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPEL 372
HGL AI LFE M + ++PD +TF ++S+C H GLV EGK YF+ M++ +G++P +
Sbjct: 316 AHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRV 375
Query: 373 DHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW-----------------EAAESRLL 415
DHYSC+VDLLGR GLL +A + I+ MP+ PNA +W E AE +
Sbjct: 376 DHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLIN 435
Query: 416 LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDK 475
+EP ++ L+N+Y+ R W AA+VR L+K++GLK PG S IE N + F D+
Sbjct: 436 MEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDR 495
Query: 476 SNTRLSEILPVLDFLVDQMKTLGY-------VPEVHEEKVDDASHKRTE 517
S+ +I L+ L+ +++ GY + +V EE +D +K +E
Sbjct: 496 SHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSE 544
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 237/438 (54%), Gaps = 35/438 (7%)
Query: 99 FGSSN--VFDQLLDTPVVDVEKLIS--MHHDLHRERLKV------------DASFLSTAV 142
F SS VFD++L+ V+ +IS + +L+R+ L++ ++LS+ +
Sbjct: 109 FSSSGMQVFDEMLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSS-L 167
Query: 143 TSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVV 202
+C + +R G + G ++ V S+L+ +YSKC + D ++FE + V
Sbjct: 168 MACSGLQALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKV 227
Query: 203 SWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQT 262
S T I+A FAQ + ++ + M + E + +++L +LG G+ H
Sbjct: 228 SMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLV 287
Query: 263 IRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAI 322
I+ F S V N LI+MY KCG++E++ VF+ M + VSWNSMIA +A+HG RA+
Sbjct: 288 IKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRAL 347
Query: 323 DLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDL 381
L++EM + V+P +TFL ++ +C H GLVE+G + SM + H L P ++HY+CVVD+
Sbjct: 348 QLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDM 407
Query: 382 LGRAGLLEEARDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATH 424
LGRAGLL EA+ FI+ +PI P+ ++W+ AAE +L PE + +
Sbjct: 408 LGRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPY 467
Query: 425 VQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEIL 484
+ LAN+Y+ W + A+ K MK+ + G SWIEI N ++ F EDK + + I
Sbjct: 468 ILLANIYSSKGRWKERAKTIKRMKEMCVAKETGISWIEIENNLHSFVVEDKMHPQAEIIY 527
Query: 485 PVLDFLVDQMKTLGYVPE 502
VL L M GYVP+
Sbjct: 528 GVLAELFGHMIDEGYVPD 545
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 142/281 (50%), Gaps = 7/281 (2%)
Query: 132 KVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYK 191
++D + L+T +++C CLA+ GF + VG++LIT Y KC +
Sbjct: 56 RLDQATLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQ 115
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
VF+EM RNV++WTAII+ Q L L+ M N ++EPN T+ S L AC+G A
Sbjct: 116 VFDEMLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQA 175
Query: 252 LGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAG 311
L +G H + ++G S V ++L+ MY KCG++ + + +F + D VS ++AG
Sbjct: 176 LREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAG 235
Query: 312 YAQHGLAVRAIDLFEEMMKQRVKPDA---ITFLGVISSCRHGGLVEEGKVYFDSMAKHGL 368
+AQ+G A+ F +M++ + D+ LGV + GL G+ + K
Sbjct: 236 FAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGL---GQQIHSLVIKRSF 292
Query: 369 KPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
+ ++++ + G LE++ +MP N+V W +
Sbjct: 293 GSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCM-NSVSWNS 332
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 1/209 (0%)
Query: 179 LYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRN-SMLEPNDF 237
+Y+K V+ DA K+F+EMP+R+ VSW +I+ F ++ D+ ++ M++ +
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T T+ILSAC + HC + GF I V N+LI+ Y KCG + VF+ M
Sbjct: 61 TLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEM 120
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+++++W ++I+G Q L ++ LF EM V+P+++T+L + +C + EG
Sbjct: 121 LERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGC 180
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAG 386
+ K GL+ + S ++D+ + G
Sbjct: 181 QIHGRVWKLGLQSDFCVESALMDMYSKCG 209
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 234/443 (52%), Gaps = 53/443 (11%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
I++ + R+ + D ++ + +C R + G L +++G + + L+ L
Sbjct: 110 INLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVEL 169
Query: 180 YSKCRVIIDAYKVFEEMPVRNVVS-------------------------------WTAII 208
Y KC V+ DA K+F+ MP R+VV+ WT +I
Sbjct: 170 YGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVI 229
Query: 209 AAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFF 268
+ + + LE++R M+ +EPN+ TF +LSAC GAL GR H + G
Sbjct: 230 DGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVE 289
Query: 269 SYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEM 328
VA +LI+MY +CG+++EA +F+ + KD+ ++NSMI G A HG ++ A++LF EM
Sbjct: 290 VNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEM 349
Query: 329 MKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK-HGLKPELDHYSCVVDLLGRAGL 387
+K+RV+P+ ITF+GV+++C HGGLV+ G F+SM HG++PE++HY C+VD+LGR G
Sbjct: 350 LKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGR 409
Query: 388 LEEARDFIKQM----------------PIYPNAVIWEAAESRLLLEPE--CAATHVQLAN 429
LEEA DFI +M I+ N + E ++LL E + + + L+N
Sbjct: 410 LEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKV-AKLLSEHYRIDSGSFIMLSN 468
Query: 430 LYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDF 489
YA + W AA VR+ M+ G+ PGCS IE+ N ++ F + D + I L+
Sbjct: 469 FYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEE 528
Query: 490 LVDQMKTLGYVP--EVHEEKVDD 510
L K GY+P EV +DD
Sbjct: 529 LNYLTKFEGYLPATEVALHDIDD 551
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 33/267 (12%)
Query: 158 QCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQV 217
C AI+T + +V L+ +Y K I A K+F NV +T++I F
Sbjct: 47 HCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSY 106
Query: 218 DMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANS 276
+ L+ +M+R +L N + T++L AC ALG G+ H ++ G +A
Sbjct: 107 TDAINLFCQMVRKHVLADN-YAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALK 165
Query: 277 LISMYCKCG-------------------------------NVEEAVYVFNNMHGKDIVSW 305
L+ +Y KCG VEEA+ VFN M +D V W
Sbjct: 166 LVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCW 225
Query: 306 NSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAK 365
+I G ++G R +++F EM + V+P+ +TF+ V+S+C G +E G+ M K
Sbjct: 226 TMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRK 285
Query: 366 HGLKPELDHYSCVVDLLGRAGLLEEAR 392
G++ ++++ R G ++EA+
Sbjct: 286 CGVEVNRFVAGALINMYSRCGDIDEAQ 312
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 256 RSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQH 315
+S HC I+ VA L+ +YCK ++ A+ +F ++ + S+I G+
Sbjct: 44 QSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSF 103
Query: 316 GLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHGLKPELDHY 375
G AI+LF +M+++ V D ++ +C + GK + K GL +
Sbjct: 104 GSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIA 163
Query: 376 SCVVDLLGRAGLLEEARDFIKQMP 399
+V+L G+ G+LE+AR MP
Sbjct: 164 LKLVELYGKCGVLEDARKMFDGMP 187
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 229/427 (53%), Gaps = 52/427 (12%)
Query: 120 ISMHHDLHRERLKVDASFLSTAVTSCGSTRNIRGGAPYQCLAIRTGFIANVYVGSSLITL 179
+S+ + R L D+ L + S + G C+ + TG NV V SSLI +
Sbjct: 97 VSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSVCSSLIQM 156
Query: 180 YSKCRVIIDAYKVFEE----------MPV----------------------RNVVSWTAI 207
YS C + A K+F+E M V ++V SWTA+
Sbjct: 157 YS-CYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAM 215
Query: 208 IAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGF 267
I+ + Q + ++L+R M+ ++P++ ++LSAC GAL G H +
Sbjct: 216 ISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKL 275
Query: 268 FSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEE 327
+ + NSLI MY K GN+ +A+ +F NM K I++W +MIAG A HGL A+ +F
Sbjct: 276 SKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSC 335
Query: 328 MMKQ-RVKPDAITFLGVISSCRHGGLVEEGKVYFDSM-AKHGLKPELDHYSCVVDLLGRA 385
M K+ RVKP+ +TF+ ++S+C H GLVE G+ YF SM +++G++P+++HY C++DLLGRA
Sbjct: 336 MEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRA 395
Query: 386 GLLEEARDFIKQMPIYPNAVIW-------------EAAESRL----LLEPECAATHVQLA 428
G L+EA++ + +MP NA IW E AE L +LEP + L+
Sbjct: 396 GHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPGHCGNYSLLS 455
Query: 429 NLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLD 488
N YA + W+++ VRK+M+D G++ PG S+IE+ N+VY F A DK + +I VL
Sbjct: 456 NTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIVYEFIAGDKLSIYFVDIYDVLH 515
Query: 489 FLVDQMK 495
L Q+K
Sbjct: 516 SLDGQIK 522
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 32/229 (13%)
Query: 219 MCLELYRMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLI 278
+ + ++R +R L + ++ +L + G G+ HC + G + V +SLI
Sbjct: 95 LAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSVCSSLI 154
Query: 279 SM-----------------------------YCKCGNVEEAVYVFNNM--HGKDIVSWNS 307
M Y K G+V A +F++M KD+ SW +
Sbjct: 155 QMYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTA 214
Query: 308 MIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGKVYFDSMAKHG 367
MI+GY Q AI LF M + VKPD I L V+S+C G + G+ + + KH
Sbjct: 215 MISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHK 274
Query: 368 LKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEAAESRLLL 416
L + Y+ ++D+ ++G + +A + + M + + W + L L
Sbjct: 275 LSKIVPLYNSLIDMYAKSGNIRKALELFENMK-HKTIITWTTMIAGLAL 322
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 206/369 (55%), Gaps = 20/369 (5%)
Query: 154 GAPYQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQ 213
G C +R G A+ V S+L +Y+K + DA VF+ MPVR+VVSWTA++ +
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD 240
Query: 214 EWQVDMCLELY-RMMRNSMLEPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQ 272
+ L+ RMMR+ +L PN+FT+ +L AC + G+ H + +
Sbjct: 241 AGRDGEGFRLFVRMMRSGIL-PNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCF 299
Query: 273 VANSLISMYCKCGNVEEAVYVFNNMHGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQR 332
++L+ MY K G++ A+ VF M D+VSW +MI+GYAQ+G A+ F+ ++
Sbjct: 300 AGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSG 359
Query: 333 VKPDAITFLGVISSCRHGGLVEEGKVYFDSMA-KHGLKPELDHYSCVVDLLGRAGLLEEA 391
+PD +TF+GV+S+C H GLV++G F S+ K+G++ DHY+CV+DLL R+GL E A
Sbjct: 360 FRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERA 419
Query: 392 RDFIKQMPIYPNAVIWE-----------------AAESRLLLEPECAATHVQLANLYAGV 434
D I MP+ PN +W AAE+ +EPE AT+V LAN+YA V
Sbjct: 420 EDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASV 479
Query: 435 RCWDQAARVRKLMKDKGLKTNPGCSWIEIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQM 494
+D+ +R+ M+ +G+ P SWIE+ V+ F DKS+ + EI +L L +M
Sbjct: 480 GLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKM 539
Query: 495 KTLGYVPEV 503
+ GYV +
Sbjct: 540 REEGYVADT 548
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 111/232 (47%), Gaps = 10/232 (4%)
Query: 184 RVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEP------NDF 237
R + A +F+ MP R+ SW+AI++A + Q L +YR M + EP N+F
Sbjct: 107 RGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRM---LREPGGSGADNEF 163
Query: 238 TFTSILSACTGSGALGQGRSAHCQTIRMGFFSYIQVANSLISMYCKCGNVEEAVYVFNNM 297
T +S L+A T + GR HC +R G + V ++L MY K G +++A VF+ M
Sbjct: 164 TASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRM 223
Query: 298 HGKDIVSWNSMIAGYAQHGLAVRAIDLFEEMMKQRVKPDAITFLGVISSCRHGGLVEEGK 357
+D+VSW +M+ Y G LF MM+ + P+ T+ GV+ +C + GK
Sbjct: 224 PVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGK 283
Query: 358 VYFDSMAKHGLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIWEA 409
MAK S +V + + G + A + MP P+ V W A
Sbjct: 284 QVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMP-KPDLVSWTA 334
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 190/340 (55%), Gaps = 30/340 (8%)
Query: 192 VFEEMPVRNVVSWTAIIAAFAQEWQVDMCLELYRMMRNSMLEPNDFTFTSILSACTGSGA 251
+F ++ N+ W +I D +E Y +MR+ PN+FTF +L AC
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 252 LGQGRSAHCQTIR---------MGFFSYIQVANSLISMYCKCGNVEEAVYVFNNMHGKDI 302
L G H ++ MG + V SL+ MY KCGN+E+A VF+ M KDI
Sbjct: 128 LQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDI 187
Query: 303 VSWNSMIAGYAQHGLAVRAIDLFEEMMKQR---VKPDAITFLGVISSCRHGGLVEEGKVY 359
VSW +MI GYA +GL AIDLF +M ++ +KPD TF+G++ C H GLV+EG+ Y
Sbjct: 188 VSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRY 247
Query: 360 FDSMAKH-GLKPELDHYSCVVDLLGRAGLLEEARDFIKQMPIYPNAVIW----------- 407
F+SM + L P ++HY C+VDLLGRAGLL+EA I+ MP+ NA++W
Sbjct: 248 FNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHR 307
Query: 408 -----EAAESRLL-LEPECAATHVQLANLYAGVRCWDQAARVRKLMKDKGLKTNPGCSWI 461
E A +L+ LEP + +V L+N+Y+ WD+AA+VR M +K ++ PGCSWI
Sbjct: 308 DTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWI 367
Query: 462 EIMNVVYRFRAEDKSNTRLSEILPVLDFLVDQMKTLGYVP 501
E+ +V+ F DK + +I LD L +MK GYVP
Sbjct: 368 EVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVP 407
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 97/185 (52%), Gaps = 14/185 (7%)
Query: 157 YQCLAIRTGFIANVYVGSSLITLYSKCRVIIDAYKVFEEMPVRNVVSWTAIIAAFAQEWQ 216
++C+ + G + NV+VG+SL+ +Y+KC + A VF+ MP +++VSW A+I +A
Sbjct: 144 HKCI-MEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGL 202
Query: 217 VDMCLELY-RMMRNSML--EPNDFTFTSILSACTGSGALGQGRSAHCQTIRMGFFSY--- 270
++L+ +M R + L +P+ TF +L CT +G + +GR R FFS
Sbjct: 203 PKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYR--FFSLTPS 260
Query: 271 IQVANSLISMYCKCGNVEEAVYVFNNMHGK-DIVSWNSMIAGYAQHGLAVRAIDLFEEMM 329
I+ ++ + + G ++EA + NM + + + W +++ H R L E +
Sbjct: 261 IEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIH----RDTQLAELAL 316
Query: 330 KQRVK 334
KQ ++
Sbjct: 317 KQLIE 321
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,771,619,278
Number of Sequences: 23463169
Number of extensions: 310284998
Number of successful extensions: 806733
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10061
Number of HSP's successfully gapped in prelim test: 1611
Number of HSP's that attempted gapping in prelim test: 673530
Number of HSP's gapped (non-prelim): 53549
length of query: 519
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 372
effective length of database: 8,910,109,524
effective search space: 3314560742928
effective search space used: 3314560742928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)