Query 044427
Match_columns 734
No_of_seqs 381 out of 2821
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 04:58:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044427.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044427hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 5E-117 2E-121 1023.8 49.6 609 75-701 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 1E-112 5E-117 989.4 52.6 615 75-700 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 4.3E-81 1.5E-85 753.7 45.3 530 80-705 2-610 (926)
4 3afg_A Subtilisin-like serine 100.0 1.8E-59 6.2E-64 534.2 32.9 338 30-555 59-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 3.7E-56 1.3E-60 491.0 19.8 319 29-554 22-392 (395)
6 3t41_A Epidermin leader peptid 100.0 2.7E-55 9.1E-60 496.1 25.5 333 28-554 63-465 (471)
7 1y9z_A Alkaline serine proteas 100.0 1.3E-53 4.5E-58 477.2 26.6 376 82-576 11-438 (441)
8 1r6v_A Subtilisin-like serine 100.0 7.9E-52 2.7E-56 476.8 27.8 347 30-565 52-450 (671)
9 1dbi_A AK.1 serine protease; h 100.0 4.8E-51 1.6E-55 429.3 25.3 262 81-553 17-279 (280)
10 1r0r_E Subtilisin carlsberg; h 100.0 2.1E-51 7E-56 430.9 21.8 259 82-553 11-274 (274)
11 1gci_A Subtilisin; hydrolase, 100.0 3.2E-51 1.1E-55 427.9 23.2 258 82-553 11-269 (269)
12 1to2_E Subtilisin BPN'; serine 100.0 6.1E-51 2.1E-55 428.7 22.4 261 82-554 11-276 (281)
13 4h6x_A Thiazoline oxidase/subt 100.0 6.6E-53 2.2E-57 458.7 7.5 304 81-553 17-337 (357)
14 1thm_A Thermitase; hydrolase(s 100.0 2E-50 6.8E-55 424.5 23.7 260 82-553 18-278 (279)
15 2p4e_P Proprotein convertase s 100.0 8E-53 2.8E-57 481.9 4.8 301 30-529 108-422 (692)
16 2x8j_A Intracellular subtilisi 100.0 1.9E-50 6.6E-55 433.8 18.7 267 81-553 27-310 (327)
17 3zxy_A Subtilisin-like protein 100.0 1.3E-50 4.4E-55 427.2 16.0 265 91-553 3-274 (282)
18 2ixt_A 36KDA protease; serine 100.0 4.9E-49 1.7E-53 420.9 27.4 280 81-548 12-309 (310)
19 4h6w_A N-terminal cyanobactin 100.0 2.9E-50 9.9E-55 429.7 14.6 276 80-553 6-287 (306)
20 2z30_A TK-subtilisin; thermoco 100.0 8.7E-50 3E-54 428.0 17.8 268 81-554 14-317 (320)
21 3lxu_X Tripeptidyl-peptidase 2 100.0 3.1E-48 1.1E-52 464.3 30.3 412 96-702 214-654 (1354)
22 2iy9_A SUBA; toxin, shiga, pla 100.0 1.4E-49 4.9E-54 431.5 16.9 274 81-554 29-329 (347)
23 1wmd_A Protease; alpha-beta hy 100.0 1.3E-48 4.3E-53 436.5 22.3 297 79-555 5-319 (434)
24 3lpc_A APRB2; protease, subtil 100.0 7.2E-49 2.5E-53 425.0 17.2 299 82-555 19-338 (340)
25 1sh7_A Extracellular subtilisi 100.0 5E-47 1.7E-51 399.1 26.0 238 84-532 18-259 (284)
26 2b6n_A Proteinase K; S binding 100.0 3.3E-46 1.1E-50 392.1 24.1 238 85-531 21-262 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 6.5E-46 2.2E-50 389.9 23.7 240 82-532 18-261 (276)
28 2oxa_A Extracellular serine pr 100.0 2.3E-46 7.9E-51 434.0 20.5 292 82-558 57-429 (600)
29 2pwa_A Proteinase K; structure 100.0 3.9E-46 1.3E-50 391.3 20.1 238 90-549 26-272 (279)
30 1p8j_A Furin precursor; prohor 100.0 1.8E-45 6.3E-50 414.5 17.3 287 82-556 25-332 (471)
31 3f7m_A Alkaline serine proteas 100.0 1.1E-44 3.7E-49 381.2 18.5 227 91-532 28-263 (279)
32 2id4_A Kexin; KEX2, kexin, fur 100.0 1.1E-44 3.6E-49 411.0 19.3 279 82-556 41-344 (503)
33 2qtw_B Proprotein convertase s 100.0 3.4E-44 1.2E-48 400.7 22.1 241 87-529 18-270 (546)
34 3hjr_A Extracellular serine pr 100.0 3.5E-42 1.2E-46 400.2 21.7 311 83-555 58-426 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 1.9E-24 6.6E-29 245.7 8.0 98 191-293 273-384 (552)
36 1ga6_A Serine-carboxyl protein 99.8 3.9E-21 1.3E-25 208.4 11.2 101 193-293 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 98.8 2.9E-09 9.9E-14 120.2 7.0 98 193-292 262-374 (544)
38 2w2n_P Proprotein convertase s 98.5 7.4E-08 2.5E-12 86.0 4.6 64 9-73 50-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.1 4.8E-06 1.6E-10 69.2 6.0 48 29-77 32-79 (80)
40 2qtw_A Proprotein convertase s 97.9 9.3E-06 3.2E-10 73.2 4.8 62 11-73 62-123 (124)
41 3icu_A E3 ubiquitin-protein li 97.9 4.3E-05 1.5E-09 74.0 9.4 85 343-427 83-187 (194)
42 1v5i_B POIA1, IA-1=serine prot 97.7 6.1E-05 2.1E-09 61.8 6.4 57 10-73 16-75 (76)
43 2z30_B TK-subtilisin; thermoco 96.5 0.0026 9E-08 50.2 4.5 45 27-72 19-63 (65)
44 2ys4_A Hydrocephalus-inducing 95.5 0.034 1.1E-06 49.7 7.8 75 617-699 42-117 (122)
45 3qbt_B Inositol polyphosphate 92.9 0.72 2.5E-05 42.0 10.7 84 617-701 44-138 (140)
46 3iib_A Peptidase M28; YP_92679 92.8 0.23 7.7E-06 54.7 8.6 74 353-426 124-226 (444)
47 2ek8_A Aminopeptidase; metallo 91.3 0.31 1.1E-05 53.2 7.4 64 351-414 108-182 (421)
48 3lxu_X Tripeptidyl-peptidase 2 91.3 0.19 6.3E-06 61.7 5.9 33 82-114 21-55 (1354)
49 2e6j_A Hydin protein; PAPD, st 90.7 1 3.5E-05 38.8 8.8 79 617-699 27-108 (112)
50 2r39_A FIXG-related protein; s 90.4 1.4 4.9E-05 38.6 9.6 57 615-673 30-86 (118)
51 2qsv_A Uncharacterized protein 83.6 4 0.00014 40.0 9.3 80 617-700 20-105 (220)
52 3qis_A Inositol polyphosphate 81.9 7.8 0.00027 41.1 11.4 84 617-701 47-141 (366)
53 1y9z_A Alkaline serine proteas 79.9 1 3.5E-05 49.3 3.7 31 432-470 181-211 (441)
54 3kas_A Transferrin receptor pr 79.3 1.8 6E-05 49.7 5.5 61 354-414 128-230 (640)
55 3fed_A Glutamate carboxypeptid 77.7 1.5 5.2E-05 50.8 4.3 63 353-415 150-268 (707)
56 2qsv_A Uncharacterized protein 69.4 40 0.0014 32.6 11.9 78 617-698 135-218 (220)
57 1z9l_A Vesicle-associated memb 64.3 24 0.00084 31.0 8.3 53 617-672 28-80 (128)
58 3idu_A Uncharacterized protein 63.9 30 0.001 30.6 8.7 50 617-670 34-84 (127)
59 1wic_A Hypothetical protein ri 62.0 19 0.00066 32.9 7.3 51 618-671 37-87 (152)
60 3zyz_A Beta-D-glucoside glucoh 61.8 17 0.00058 42.1 8.5 56 617-673 614-676 (713)
61 2x41_A Beta-glucosidase; hydro 59.9 15 0.00051 42.7 7.6 70 601-673 598-679 (721)
62 2cri_A Vesicle-associated memb 59.3 27 0.00092 31.7 7.8 52 617-671 32-83 (147)
63 1m1s_A WR4; structural genomic 56.8 35 0.0012 29.7 7.6 51 619-672 26-76 (116)
64 1row_A SSP-19, MSP-domain prot 56.6 39 0.0013 28.9 7.9 50 619-671 18-67 (109)
65 1msp_A MSP, major sperm protei 54.9 34 0.0012 30.1 7.5 51 618-671 27-77 (126)
66 3isy_A Bsupi, intracellular pr 52.6 40 0.0014 29.5 7.3 53 617-670 19-88 (120)
67 3abz_A Beta-glucosidase I; gly 51.6 26 0.00089 41.4 7.9 161 484-672 617-799 (845)
68 1w8o_A Bacterial sialidase; 3D 50.8 80 0.0027 35.3 11.8 78 603-687 364-442 (601)
69 3rfr_A PMOB; membrane, oxidore 46.0 1.3E+02 0.0043 31.7 10.9 65 617-687 299-395 (419)
70 1wgl_A TOLL-interacting protei 40.8 18 0.00062 27.4 2.8 35 493-527 3-37 (59)
71 1yew_A Particulate methane mon 40.3 3.1E+02 0.011 28.5 12.7 67 617-687 265-363 (382)
72 2kq1_A BH0266 protein; solutio 37.6 8.8 0.0003 33.5 0.7 54 620-673 57-112 (119)
73 4ep8_B Urease subunit beta; al 36.0 44 0.0015 28.0 4.6 49 618-667 20-82 (101)
74 4ac7_B Urease subunit beta; hy 30.6 47 0.0016 29.0 4.0 49 618-667 26-88 (126)
75 4ubp_B Protein (urease (chain 30.6 47 0.0016 29.0 4.0 49 618-667 26-88 (126)
76 2l0d_A Cell surface protein; s 28.9 2E+02 0.007 24.6 8.0 23 617-639 20-43 (114)
77 3q48_A Chaperone CUPB2; IG fol 28.7 3.3E+02 0.011 26.9 10.7 84 618-702 44-148 (257)
78 3sd2_A Putative member of DUF3 24.6 3.1E+02 0.011 23.0 7.9 64 605-684 35-99 (101)
79 1ni7_A ER75, hypothetical prot 23.6 54 0.0018 30.0 3.4 33 488-521 78-110 (155)
80 3ndz_E Endoglucanase D; cellot 23.5 3.3E+02 0.011 22.9 9.2 30 618-647 17-47 (107)
81 4ay0_A Chaperone protein CAF1M 21.6 5E+02 0.017 24.8 10.2 59 618-677 28-91 (218)
82 3e9t_A Na/Ca exchange protein; 20.6 2.5E+02 0.0084 23.8 7.0 31 641-672 47-78 (114)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=5.1e-117 Score=1023.82 Aligned_cols=609 Identities=40% Similarity=0.647 Sum_probs=543.5
Q ss_pred cCCCcccccccc---CccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCccccccc-CCcc---cCceeEeeeecC
Q 044427 75 TTRSWDFMGFSK---GKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTG-ANFT---CNNKIIGARYYN 147 (734)
Q Consensus 75 ~~~s~~~~g~~~---~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~-~~f~---~n~ki~g~~~~~ 147 (734)
++++|+|+|++. .|..+.+|+||+|||||||||++||+|.+.+++|+|.+|++.|+. .+|+ ||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 478999999985 578889999999999999999999999999999999999999998 7775 999999999998
Q ss_pred CCCcc----ccCCCCCCCCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCCCCHHHHHHHHHH
Q 044427 148 SENIY----EVTDFHSPRDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDGCATADILAAFDD 223 (734)
Q Consensus 148 ~~~~~----~~~~~~~~~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g~~~~~i~~ai~~ 223 (734)
+++.. ...+..+++|..||||||||||||+.+++.+++|++.|.+.||||+|+|+++|+|+..++..+++++||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~~ 160 (649)
T 3i6s_A 81 KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQ 160 (649)
T ss_dssp HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHHH
T ss_pred CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHHH
Confidence 65421 12344678899999999999999999888888999999999999999999999999888999999999999
Q ss_pred HHhCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEEEEeC
Q 044427 224 AIADGVDIISVSLGSDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQAVLG 303 (734)
Q Consensus 224 ai~~g~dVINlSlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~ 303 (734)
|+++|+||||||||.. ..++..+.+.+++++|.++|++||+||||+|+...++++.+||+|+|||++.+|.|...+.++
T Consensus 161 A~~~gvdVIn~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lg 239 (649)
T 3i6s_A 161 AVADGVDMISISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLG 239 (649)
T ss_dssp HHHTTCSEEEECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEET
T ss_pred HHHcCCCEEEeCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeC
Confidence 9999999999999987 467788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCc--CceEEEEeeCCc-----chhhhccC
Q 044427 304 NGITYPGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKV--EGKIVFCESLLD-----GSDILAVN 376 (734)
Q Consensus 304 ~g~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkiv~~~~~~~-----~~~~~~~G 376 (734)
|++.+.|.+++........+|+++... ...|.+..++...+ +||||+|.|+.+ ..+++++|
T Consensus 240 ng~~~~g~sl~~~~~~~~~~plv~~~~------------~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~G 307 (649)
T 3i6s_A 240 NGLKIRGWSLFPARAFVRDSPVIYNKT------------LSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARL 307 (649)
T ss_dssp TSCEEEEECCCSSCBCEEEEEEECCTT------------TTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTC
T ss_pred CCcEEeeeecccCcccCcceeeEeccc------------ccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcC
Confidence 999999999988776677899998662 56799988888877 999999999874 77899999
Q ss_pred ceEEEEecCCccCcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeec-CCCCceeeccCCCCCCCCCCCCCC
Q 044427 377 GLGTIMADSVFTDLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKD-AMAPKVVSFSSRGPNPITVDILKP 455 (734)
Q Consensus 377 a~g~i~~n~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~-~~~~~~a~fSS~Gpt~~~~~~~KP 455 (734)
+.|+|++|+......+.+.+|+.+++..++..|++|++++.++++++.+..++.+ .+.+.++.||||||+...+++|||
T Consensus 308 a~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKP 387 (649)
T 3i6s_A 308 KAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKP 387 (649)
T ss_dssp SEEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSC
T ss_pred ceEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCC
Confidence 9999999988444477889999999999999999999999999999999998887 889999999999999977899999
Q ss_pred cEEecCCCEeeccCCCCCCCCCCCCC-CCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCc
Q 044427 456 DITAPGVDILASWSPVAPPSLDPEDT-RSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQ 534 (734)
Q Consensus 456 DI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~ 534 (734)
||+|||++|+++|+....+.....+. +...|..+||||||||||||++|||||+||+|+|++||++||+||.+++..+.
T Consensus 388 DI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~ 467 (649)
T 3i6s_A 388 DILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRK 467 (649)
T ss_dssp CEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSS
T ss_pred eEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCC
Confidence 99999999999998754433333222 34789999999999999999999999999999999999999999999887554
Q ss_pred c---------cCCCCCCCCccCccccCCCceeccCCchhhhhhhhccCCCcceeEEeccCCCcc--cCCCCCCCCCCCCC
Q 044427 535 E---------DLEFAYGSGHINPAQAIDPGLVYDATEVDYVNFLCKQGYNTTIIRQITGDNSSV--CNSTEPGRAWDLNY 603 (734)
Q Consensus 535 ~---------~~~~~~G~G~vn~~~Al~~~lv~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~--c~~~~~~~~~~ln~ 603 (734)
+ .+++.||+|+||+.+|++||||||+..+||++|||++||+..+|+.|++++. . |++ .+.||||
T Consensus 468 ~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~-~~~C~~----~~~~lNy 542 (649)
T 3i6s_A 468 PIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSA-SHNCSN----PSADLNY 542 (649)
T ss_dssp BCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTS-CC-CCC----CCCCCCC
T ss_pred cccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCC-cCCCCC----chhhcCC
Confidence 3 3578999999999999999999999999999999999999999999998765 7 975 4679999
Q ss_pred Cceeeee-cCCCceE--EEEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEccccCCCCceE
Q 044427 604 PSFSLAI-EDGQPIY--GVFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKIAQQPIMS 680 (734)
Q Consensus 604 psi~~~~-~~~~~~~--~~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~ 680 (734)
|||++.+ +.+.... ++++|||||||+...+|+++++.|.|++|+|+|++|+|.+.+|+++|+|||+........+.|
T Consensus 543 Ps~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~f 622 (649)
T 3i6s_A 543 PSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNV 622 (649)
T ss_dssp SSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCE
T ss_pred CcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEE
Confidence 9999987 4432112 899999999999899999999999999999999999998899999999999987665567999
Q ss_pred EEEEEEc--CceEEEeEEEEEec
Q 044427 681 GAIVWED--GVHQVRSPVVIYNI 701 (734)
Q Consensus 681 G~i~~~~--~~~~v~~P~~~~~~ 701 (734)
|+|+|++ +.|.||+|++++..
T Consensus 623 g~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 623 GSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEEcCCCCeEEEEeEEEEEc
Confidence 9999998 99999999999864
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.5e-112 Score=989.41 Aligned_cols=615 Identities=53% Similarity=0.911 Sum_probs=526.2
Q ss_pred cCCCccccccccC-ccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCccccccc-CCcccCceeEeeeecCCCCcc
Q 044427 75 TTRSWDFMGFSKG-KLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTG-ANFTCNNKIIGARYYNSENIY 152 (734)
Q Consensus 75 ~~~s~~~~g~~~~-~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~-~~f~~n~ki~g~~~~~~~~~~ 152 (734)
++++|+|+|+++. |....+|+||+|||||||||++||+|.++++++++.+|++.|+. .+|.||+|++++++|..+...
T Consensus 1 tt~s~~flGl~~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~~~ 80 (621)
T 3vta_A 1 TTRSWDFLGFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGRPI 80 (621)
T ss_dssp CCSHHHHTTCCTTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSSSC
T ss_pred CCCChhHcCCCccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCCcc
Confidence 5789999999874 57788999999999999999999999999999999999999998 889999999999999988766
Q ss_pred ccCCCCCCCCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHhCCCcEE
Q 044427 153 EVTDFHSPRDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDGCATADILAAFDDAIADGVDII 232 (734)
Q Consensus 153 ~~~~~~~~~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g~~~~~i~~ai~~ai~~g~dVI 232 (734)
.+.+..+++|++||||||||||||+...+.+.+|++.|.++||||+|+|++||+|++.++..+++++||++|+++|+|||
T Consensus 81 ~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~a~~~g~dVi 160 (621)
T 3vta_A 81 SPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDII 160 (621)
T ss_dssp CTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHHHHHHTCSEE
T ss_pred CCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 66777889999999999999999999888888888889999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEEEEeCCCeEeeeee
Q 044427 233 SVSLGSDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLS 312 (734)
Q Consensus 233 NlSlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~ 312 (734)
|||||+..+.++..+++++++++|+++||+||+||||+|+...++++.+||+++|++++.+|.|...+.++++..+.+.+
T Consensus 161 n~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s 240 (621)
T 3vta_A 161 SLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVS 240 (621)
T ss_dssp EECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEBC
T ss_pred EecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceeeeee
Confidence 99999986667788999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred cccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCc--chhhhccCceEEEEecCCccCc
Q 044427 313 INSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLD--GSDILAVNGLGTIMADSVFTDL 390 (734)
Q Consensus 313 ~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~--~~~~~~~Ga~g~i~~n~~~~~~ 390 (734)
+... ....+++++....... .+.......|.+..++...++|||++|.+... .......|+.+++++++... .
T Consensus 241 ~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~gvi~~~~~~~-~ 315 (621)
T 3vta_A 241 INTF--DNQYYPLVSGRDIPNT--GFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRD-Y 315 (621)
T ss_dssp CCCS--CCEEECEEETTTSCCT--TCCHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHHHHHHTTCSEEEEECSCCS-S
T ss_pred cccC--CCcccccccccccccc--cccccccccccccccccccccceEEEEecCCChhHHhhhhcceeEEEEEecCCC-c
Confidence 7654 3456777776554332 12344567899999999999999999998654 56677889999999887543 3
Q ss_pred ccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCC
Q 044427 391 AFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSP 470 (734)
Q Consensus 391 ~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~ 470 (734)
.+.+.+|...++..++..++.|+..+..+.+.+.......+...+.++.||||||+...++++||||+|||++|+|+++.
T Consensus 316 ~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~ 395 (621)
T 3vta_A 316 ADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPS 395 (621)
T ss_dssp CCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCS
T ss_pred ccccccceEEECHHHHHHHHHHHhccCCcceEEecceEeccCCCCceeeecCCCCCCCCCCeeccccccCCcceEeecCc
Confidence 56788999999999999999999999999988877777766778999999999999877899999999999999999986
Q ss_pred CCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccc
Q 044427 471 VAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQ 550 (734)
Q Consensus 471 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~ 550 (734)
...... +.....|..+||||||||||||++|||||+||+|+|++||++||+||++++..+.+..+++||+|+||+.+
T Consensus 396 ~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~~~~~~~~~GaG~v~~~~ 472 (621)
T 3vta_A 396 VAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVNPLK 472 (621)
T ss_dssp SSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTTCTTTHHHHTTCBCCHHH
T ss_pred cccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccCCCCCchhcCCCccCHHH
Confidence 432222 23347899999999999999999999999999999999999999999999888777788999999999999
Q ss_pred cCCCceeccCCchhhhhhhhccCCCcceeEEeccCCCcccCCCCCCCCCCCCCCceeeeecCCCceEEEEEEEEEecCCC
Q 044427 551 AIDPGLVYDATEVDYVNFLCKQGYNTTIIRQITGDNSSVCNSTEPGRAWDLNYPSFSLAIEDGQPIYGVFTRTVTNVGSP 630 (734)
Q Consensus 551 Al~~~lv~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~psi~~~~~~~~~~~~~~~~tv~N~~~~ 630 (734)
|++||||||+..+||+.|||+++|+..+++.+++... .|.........+||||||++........+++++|||||++..
T Consensus 473 A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~ 551 (621)
T 3vta_A 473 AVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYS-ACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQ 551 (621)
T ss_dssp HSCCSEECCCCGGGCC------------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSS
T ss_pred hcCCCeEeecccchhhhhhcccCCCchhheeeecccc-ccCCCCcCcccccccccEEEEccCCCceEEEEEEEEEccCCC
Confidence 9999999999999999999999999999999998876 888766667889999999998665555689999999999999
Q ss_pred CeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEccccCCCCceEEEEEEEcCceEEEeEEEEEe
Q 044427 631 NSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKIAQQPIMSGAIVWEDGVHQVRSPVVIYN 700 (734)
Q Consensus 631 ~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~~~~~~~v~~P~~~~~ 700 (734)
..||++++++|.|++|+|+|++|+|.+.||+++|+|||+.. .++.++||+|+|+|+.|.||+|++|+.
T Consensus 552 ~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~--~~~~~~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 552 ASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGS--IKGFVVSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp CEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEEC--CCSSEEEEEEEEECSSCCCEEEEEEEC
T ss_pred CeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEec--CCCceEEEEEEEEcCCEEEEeCEEEEE
Confidence 99999999999999999999999998889999999999864 457899999999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=4.3e-81 Score=753.72 Aligned_cols=530 Identities=21% Similarity=0.242 Sum_probs=416.6
Q ss_pred cccccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCccccccc-CC-------------cccCceeEeeee
Q 044427 80 DFMGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTG-AN-------------FTCNNKIIGARY 145 (734)
Q Consensus 80 ~~~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~-~~-------------f~~n~ki~g~~~ 145 (734)
++++++..|..+++|+||+|||||||||++||+|.+ +..|++.|.. .+ ..||+|++++++
T Consensus 2 d~i~~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~ 75 (926)
T 1xf1_A 2 DPSQVKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHD 75 (926)
T ss_dssp CTTCCHHHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEE
T ss_pred CccccHHHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeec
Confidence 456777778778899999999999999999999983 3567766653 11 139999999999
Q ss_pred cCCCCccccCCCCCCCCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC--CCHHHHHHHHHH
Q 044427 146 YNSENIYEVTDFHSPRDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG--CATADILAAFDD 223 (734)
Q Consensus 146 ~~~~~~~~~~~~~~~~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g--~~~~~i~~ai~~ 223 (734)
|.++. ...|..||||||||||||+...+.+. .+.+.||||+|+|+++|+|+..+ +...++++||+|
T Consensus 76 ~~~~~--------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~ 143 (926)
T 1xf1_A 76 YSKDG--------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRD 143 (926)
T ss_dssp SCCCS--------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred cccCC--------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHH
Confidence 97653 22388999999999999997654322 23459999999999999999876 456789999999
Q ss_pred HHhCCCcEEEEccCCCCC-CCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCC-------------CCCcCCC--CCceEEe
Q 044427 224 AIADGVDIISVSLGSDFP-FEYFEDPIAIGSFHAMKYGILTSNSAGNSGPD-------------PYSVSNF--APWTLTV 287 (734)
Q Consensus 224 ai~~g~dVINlSlG~~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------------~~~~~~~--ap~vitV 287 (734)
|+++|+||||||||.... ...+.+.++.++++|.++|++||+||||+|+. ..++.++ +||+|+|
T Consensus 144 Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitV 223 (926)
T 1xf1_A 144 AINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTV 223 (926)
T ss_dssp HHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEE
T ss_pred HHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEE
Confidence 999999999999998742 34466788889999999999999999999963 2234444 7999999
Q ss_pred cccccCceeEEEEEe-CCCeEeeeeecccCC--CCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEe
Q 044427 288 AASSIDRKFVAQAVL-GNGITYPGLSINSFD--LNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCE 364 (734)
Q Consensus 288 ga~~~~~~~~~~~~~-~~g~~~~g~~~~~~~--~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~ 364 (734)
||++.++.+...+.+ +++....+.++.... .....+|+++.+. .|.+..+ .+++||||+|.
T Consensus 224 gA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~--------------g~~~~~~--~~v~Gkivl~~ 287 (926)
T 1xf1_A 224 ASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR--------------GTKEDDF--KDVKGKIALIE 287 (926)
T ss_dssp EEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT--------------SCSTTTT--TTCTTSEEEEE
T ss_pred eccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC--------------CCCccch--hhcCCeEEEEE
Confidence 999999999888887 555444444332211 1456789998653 3765555 68999999999
Q ss_pred eCCc-----chhhhccCceEEEEecCCccCc----ccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEeccee--ec-C
Q 044427 365 SLLD-----GSDILAVNGLGTIMADSVFTDL----AFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETW--KD-A 432 (734)
Q Consensus 365 ~~~~-----~~~~~~~Ga~g~i~~n~~~~~~----~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~--~~-~ 432 (734)
|+.+ ..+++++|++|+|++|+..... .....+|+..++..++..|++ ... +++.+..+. .. .
T Consensus 288 rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~--~ti~~~~~~~~~~~~ 361 (926)
T 1xf1_A 288 RGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQ--KTITFNATPKVLPTA 361 (926)
T ss_dssp CCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSS--CEEEECSSCEEEECS
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCc--eEEEecccceecccC
Confidence 9864 6789999999999999875432 557789999999999998874 333 444444332 33 5
Q ss_pred CCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHH----h
Q 044427 433 MAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVK----A 508 (734)
Q Consensus 433 ~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----q 508 (734)
..+.++.||||||+. ++++||||+|||++|++++++ +.|..+||||||||||||++|||+ +
T Consensus 362 ~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q~~k~ 426 (926)
T 1xf1_A 362 SGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLVAGIMGLLQKQYET 426 (926)
T ss_dssp SCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHHHHHHHHHHHHHHH
T ss_pred CcceeccccCCCCCC--CCccCceEECCCCCEEeeccC-------------CcceecCccchhHHHHHHHHHHHHHHHhc
Confidence 578999999999997 999999999999999999986 689999999999999999999996 4
Q ss_pred hCCCCCHHH----HHHHHHhccccccCCCc--ccCCCCCCCCccCccccCCCceeccCCchhhhhhhhccCCCcceeEEe
Q 044427 509 AHPNWSPSS----IKSALMTTAYVMDSRKQ--EDLEFAYGSGHINPAQAIDPGLVYDATEVDYVNFLCKQGYNTTIIRQI 582 (734)
Q Consensus 509 ~~P~ls~~~----vk~~L~~TA~~~~~~~~--~~~~~~~G~G~vn~~~Al~~~lv~~~~~~d~~~~l~~~~~~~~~~~~~ 582 (734)
.||.|+|++ ||++||+||+++...+. .+++++||+|+||+.+|++|.+ |||..++++.+
T Consensus 427 ~~P~~sp~~~~~~Iks~L~~TA~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~~---- 491 (926)
T 1xf1_A 427 QYPDMTPSERLDLAKKVLMSSATALYDEDEKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSSK---- 491 (926)
T ss_dssp SSSSSHHHHHHHHHHHHHHHHSBCCEEGGGTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCSC----
T ss_pred cCCCCCHHHHHHHHHHHHHhcCCCcccCCCCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcce----
Confidence 699999997 99999999998865432 2357899999999999999854 57876654322
Q ss_pred ccCCCcccCCCCCCCCCCCCCCceeeeecCCCceEEEEEEEEEecCCCC--eeEEEEeeC--CCceEEEEEcCeeEEe--
Q 044427 583 TGDNSSVCNSTEPGRAWDLNYPSFSLAIEDGQPIYGVFTRTVTNVGSPN--STYTVRPYM--PASVSVDVEPQSLSFS-- 656 (734)
Q Consensus 583 ~~~~~~~c~~~~~~~~~~ln~psi~~~~~~~~~~~~~~~~tv~N~~~~~--~ty~~~v~~--~~g~~v~v~p~~~~~~-- 656 (734)
|.+..+. + ..+++|||||+|+.+ .+|++.+.. +.+..++|+|..|.|.
T Consensus 492 -----------------------i~l~~~~-~--~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~ 545 (926)
T 1xf1_A 492 -----------------------VHLNNVS-D--KFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSW 545 (926)
T ss_dssp -----------------------EEEEEEC-S--EEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCC
T ss_pred -----------------------eeccccC-c--cEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccC
Confidence 3333332 2 578899999999854 567777764 5677888877655443
Q ss_pred -----eCCcEEEEEEEEEccc--------cCCCCceEEEEEEE--cCce-EEEeEEEEEecCCcc
Q 044427 657 -----AVGEQKSFTVKVTGPK--------IAQQPIMSGAIVWE--DGVH-QVRSPVVIYNILPGA 705 (734)
Q Consensus 657 -----~~g~~~~~~vt~~~~~--------~~~~~~~~G~i~~~--~~~~-~v~~P~~~~~~~~~~ 705 (734)
++||+++|+|||+++. ++++.|+||+|+|+ ++.| .||+||+++.++.+.
T Consensus 546 ~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~g~~~~ 610 (926)
T 1xf1_A 546 QKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFRGDFGN 610 (926)
T ss_dssp EEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEESCGGG
T ss_pred CeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEecCccc
Confidence 3599999999999862 23566899999999 5666 499999999998543
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.8e-59 Score=534.19 Aligned_cols=338 Identities=29% Similarity=0.445 Sum_probs=279.1
Q ss_pred CcceEEEecceeeEEEEEeCHHHHHHH-----------hcCCCeeEEEeCcccccccC-----CCccccccccCccCCCC
Q 044427 30 KESLVYSYGRSFNGFAAKLTDEEVARF-----------SETEGVISVIPNHKLKIHTT-----RSWDFMGFSKGKLSSSQ 93 (734)
Q Consensus 30 ~~~v~~~y~~~~ng~s~~~~~~~i~~L-----------~~~p~V~~v~~~~~~~~~~~-----~s~~~~g~~~~~~~~~~ 93 (734)
+.+++|+|+ .|+||+++++.+++++| +++|+|++|++++.+++... .....++++..|..+++
T Consensus 59 g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (539)
T 3afg_A 59 GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYD 137 (539)
T ss_dssp TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBCSCCBCCSCC
T ss_pred CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCcHhHHhcCCC
Confidence 468999995 79999999999999999 89999999999998876532 22344566668888999
Q ss_pred CCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCCCCChHHHHHH
Q 044427 94 EGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDSEGHGTHTSST 173 (734)
Q Consensus 94 G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~~gHGThVAGi 173 (734)
|+||+|||||||||++||+|.+ ++++.++|.++. ..+.|+.|||||||||
T Consensus 138 G~gv~VaViDtGid~~Hpdl~~-----------------------~i~~~~d~~~~~-------~~~~D~~gHGThVAgi 187 (539)
T 3afg_A 138 GSGITIGIIDTGIDASHPDLQG-----------------------KVIGWVDFVNGK-------TTPYDDNGHGTHVASI 187 (539)
T ss_dssp CTTCEEEEEESBCCTTSGGGTT-----------------------TEEEEEETTTCC-------SSCCBSSSHHHHHHHH
T ss_pred CCCcEEEEEecCCCCCChHHhC-----------------------CEeeeEECCCCC-------CCCCCCCCCHHHHHHH
Confidence 9999999999999999999963 366777776543 3567899999999999
Q ss_pred hccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhC----CCcEEEEccCCCCCCCCCCCH
Q 044427 174 AAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIAD----GVDIISVSLGSDFPFEYFEDP 248 (734)
Q Consensus 174 ~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~----g~dVINlSlG~~~~~~~~~~~ 248 (734)
|||+... ..|.+.||||+|+|+.+|++++.+ ++.+++++||+||+++ |++|||||||... .....+.
T Consensus 188 iag~~~~-------~~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~-~~~~~~~ 259 (539)
T 3afg_A 188 AAGTGAA-------SNGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQ-SSDGTDS 259 (539)
T ss_dssp HHCCCGG-------GTTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCS-CCCSCSH
T ss_pred HhCcCcc-------CCCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCC-CCccchH
Confidence 9987532 123458999999999999998876 7788999999999975 8999999999884 3456688
Q ss_pred HHHHHHHHHhCCcEEEEcCCCCCCCCCCc--CCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCCCceeeeE
Q 044427 249 IAIGSFHAMKYGILTSNSAGNSGPDPYSV--SNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLNGISYPLI 326 (734)
Q Consensus 249 ~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~--~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~pl~ 326 (734)
+..++.++.++|++||+||||+|+...++ +...+++|+|||++..
T Consensus 260 l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~--------------------------------- 306 (539)
T 3afg_A 260 LSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDKY--------------------------------- 306 (539)
T ss_dssp HHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECTT---------------------------------
T ss_pred HHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecCC---------------------------------
Confidence 99999999999999999999999865443 4557899999885421
Q ss_pred EcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceEEeeccch
Q 044427 327 WGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPATLISKENG 406 (734)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~~ 406 (734)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCCCCCcce
Q 044427 407 QDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPEDTRSVSF 486 (734)
Q Consensus 407 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y 486 (734)
+.++.||||||+. ++++||||+|||++|+++++..... .+.....|
T Consensus 307 ----------------------------~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~----~~~~~~~y 352 (539)
T 3afg_A 307 ----------------------------DVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM----GQPINDYY 352 (539)
T ss_dssp ----------------------------SCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC----SEECSSSE
T ss_pred ----------------------------cccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC----CCCCcccc
Confidence 2688999999998 8999999999999999998652110 01112369
Q ss_pred EEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccccCCCc
Q 044427 487 NIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAIDPG 555 (734)
Q Consensus 487 ~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 555 (734)
..++|||||||||||++|||+|++|+|++++||++|++||++++..+. .+..||||+||+.+|++..
T Consensus 353 ~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~~--~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 353 TAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDEI--ADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGGC--SBTTTBTCBCCHHHHHTGG
T ss_pred cccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCC--CccCccCCccCHHHHhhhc
Confidence 999999999999999999999999999999999999999998875443 3789999999999999853
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=3.7e-56 Score=490.96 Aligned_cols=319 Identities=25% Similarity=0.353 Sum_probs=264.6
Q ss_pred cCcceEEEecceeeEEEEEeCHHHHHHHhcCCCeeEEEeCcccccccC--------------CCcc--ccccccCccCCC
Q 044427 29 AKESLVYSYGRSFNGFAAKLTDEEVARFSETEGVISVIPNHKLKIHTT--------------RSWD--FMGFSKGKLSSS 92 (734)
Q Consensus 29 ~~~~v~~~y~~~~ng~s~~~~~~~i~~L~~~p~V~~v~~~~~~~~~~~--------------~s~~--~~g~~~~~~~~~ 92 (734)
.+.+++++|. .|++|+++++.+++++|+++|+|++|++++.++++.. ..|. .++++..|..+
T Consensus 22 ~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~- 99 (395)
T 2z2z_A 22 IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT- 99 (395)
T ss_dssp TTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-
T ss_pred cCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-
Confidence 4678999996 5999999999999999999999999999998876421 2232 24555577766
Q ss_pred CCCC--CEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCCCCChHHH
Q 044427 93 QEGS--VIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDSEGHGTHT 170 (734)
Q Consensus 93 ~G~G--V~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~~gHGThV 170 (734)
+|+| |+|||||||||++||+|.+ ++..+++|..+... .+..++.|..||||||
T Consensus 100 ~G~g~~v~VaViDtGid~~Hp~l~~-----------------------~~~~~~~~~~~~~~--~~~~~~~d~~gHGT~v 154 (395)
T 2z2z_A 100 DGSVSVIQVAVLDTGVDYDHPDLAA-----------------------NIAWCVSTLRGKVS--TKLRDCADQNGHGTHV 154 (395)
T ss_dssp SSCCTTCEEEEEESCBCTTCTTTGG-----------------------GEEEEEECGGGCCB--CCHHHHBCSSSHHHHH
T ss_pred CCCCCcEEEEEEcCCCCCCChhHhh-----------------------ccccCccccCCccc--CCCCCCCCCCCCHHHH
Confidence 9999 9999999999999999963 24455555543210 0001246789999999
Q ss_pred HHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhC--------------------CC
Q 044427 171 SSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIAD--------------------GV 229 (734)
Q Consensus 171 AGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~--------------------g~ 229 (734)
||||+|..+. .| +.||||+|+|+.+|++++.+ ++.+++++||+||+++ ++
T Consensus 155 Agiia~~~n~----~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (395)
T 2z2z_A 155 IGTIAALNND----IG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAA 225 (395)
T ss_dssp HHHHHCCCSS----SS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCC
T ss_pred HHHHHeecCC----Cc-----eEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCC
Confidence 9999997321 12 38999999999999998876 6788999999999998 99
Q ss_pred cEEEEccCCCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEEEEeCCCeEee
Q 044427 230 DIISVSLGSDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYP 309 (734)
Q Consensus 230 dVINlSlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~ 309 (734)
+|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 226 ~Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------- 285 (395)
T 2z2z_A 226 EVISMSLGGPA----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN---------------- 285 (395)
T ss_dssp SEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT----------------
T ss_pred eEEEecCCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecCC----------------
Confidence 99999999873 2356777888899999999999999998776777788999999985422
Q ss_pred eeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccC
Q 044427 310 GLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTD 389 (734)
Q Consensus 310 g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~ 389 (734)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccC
Q 044427 390 LAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWS 469 (734)
Q Consensus 390 ~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~ 469 (734)
+.++.||+||| +|+|||++|+++++
T Consensus 286 ---------------------------------------------~~~a~fS~~G~----------~v~APG~~i~s~~~ 310 (395)
T 2z2z_A 286 ---------------------------------------------DNIASFSNRQP----------EVSAPGVDILSTYP 310 (395)
T ss_dssp ---------------------------------------------SCBCTTSCSSC----------SEEEECSSEEEEET
T ss_pred ---------------------------------------------CCCCcccCCCC----------CEEeCCCCeeeecC
Confidence 36789999997 67999999999998
Q ss_pred CCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCC-------------CCCHHHHHHHHHhccccccCCCccc
Q 044427 470 PVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHP-------------NWSPSSIKSALMTTAYVMDSRKQED 536 (734)
Q Consensus 470 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P-------------~ls~~~vk~~L~~TA~~~~~~~~~~ 536 (734)
. +.|..++|||||||||||++|||+|++| .|++.+||++|++||++++..+.
T Consensus 311 ~-------------~~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g~-- 375 (395)
T 2z2z_A 311 D-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTGW-- 375 (395)
T ss_dssp T-------------TEEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSSS--
T ss_pred C-------------CceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCCC--
Confidence 6 7899999999999999999999999999 99999999999999999876553
Q ss_pred CCCCCCCCccCccccCCC
Q 044427 537 LEFAYGSGHINPAQAIDP 554 (734)
Q Consensus 537 ~~~~~G~G~vn~~~Al~~ 554 (734)
+..||||+||+.+|++.
T Consensus 376 -~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 376 -DADYGYGVVRAALAVQA 392 (395)
T ss_dssp -BTTTBTCBCCHHHHHHH
T ss_pred -CCCccCceeCHHHHHHH
Confidence 78999999999999874
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=2.7e-55 Score=496.06 Aligned_cols=333 Identities=21% Similarity=0.278 Sum_probs=263.2
Q ss_pred ccCcceEEEecceeeEEEEEeCHHHHHHHhc-CCCeeEEEeCcccccccCC-------------Cccccccc---cCccC
Q 044427 28 SAKESLVYSYGRSFNGFAAKLTDEEVARFSE-TEGVISVIPNHKLKIHTTR-------------SWDFMGFS---KGKLS 90 (734)
Q Consensus 28 ~~~~~v~~~y~~~~ng~s~~~~~~~i~~L~~-~p~V~~v~~~~~~~~~~~~-------------s~~~~g~~---~~~~~ 90 (734)
+.+.+++++|. .|++|+++++++++++|++ +|+|++|+++..+++.... .|.+..+. ..|..
T Consensus 63 ~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~ 141 (471)
T 3t41_A 63 KKSLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDD 141 (471)
T ss_dssp HHTCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGG
T ss_pred hCCCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhc
Confidence 45678889994 5999999999999999999 9999999999888775432 34443332 35677
Q ss_pred CCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCCCCChHHH
Q 044427 91 SSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDSEGHGTHT 170 (734)
Q Consensus 91 ~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~~gHGThV 170 (734)
+.+|+||+|||||||||++||+|.+... .+. ..++....|.........+...+.|..||||||
T Consensus 142 ~~~G~gv~VaViDtGid~~Hp~~~~~~~-------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~v 205 (471)
T 3t41_A 142 LPKHANTKIAIIDTGVMKNHDDLKNNFS-------TDS---------KNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMV 205 (471)
T ss_dssp CCSSCCCCEEEEESCCCTTCTTTTTTBC-------TTC---------EECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHH
T ss_pred cCCCCCcEEEEEeCCCCCCChhHhcCcc-------cCC---------cccccCCCccCCCcccCCCCCCCcCCCCccchh
Confidence 8999999999999999999999985311 110 011111112111111112234567899999999
Q ss_pred HHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCCCC-------
Q 044427 171 SSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDGCATADILAAFDDAIADGVDIISVSLGSDFPFE------- 243 (734)
Q Consensus 171 AGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g~~~~~i~~ai~~ai~~g~dVINlSlG~~~~~~------- 243 (734)
||||+|+.. +.||||+|+|+.+|+++...+...++++||+||+++|++|||||||......
T Consensus 206 Agiiaa~g~------------~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~ 273 (471)
T 3t41_A 206 SGQTSANGK------------LIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTF 273 (471)
T ss_dssp HHHHHCBSS------------SBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSE
T ss_pred hheeecCCc------------eeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCcccccccc
Confidence 999998742 3899999999999999887788999999999999999999999999742111
Q ss_pred -----CCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCC------------------cCCCCCceEEecccccCceeEEEE
Q 044427 244 -----YFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYS------------------VSNFAPWTLTVAASSIDRKFVAQA 300 (734)
Q Consensus 244 -----~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~------------------~~~~ap~vitVga~~~~~~~~~~~ 300 (734)
...+.+..++..+.++|++||+||||+|..... .+..++++|+|||++.+
T Consensus 274 ~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~------- 346 (471)
T 3t41_A 274 RKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQK------- 346 (471)
T ss_dssp ESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECTT-------
T ss_pred ccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCCC-------
Confidence 122457778888899999999999999976432 44556788888875422
Q ss_pred EeCCCeEeeeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEE
Q 044427 301 VLGNGITYPGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGT 380 (734)
Q Consensus 301 ~~~~g~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~ 380 (734)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCccCcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEec
Q 044427 381 IMADSVFTDLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAP 460 (734)
Q Consensus 381 i~~n~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~AP 460 (734)
+.++.||++||+. |||+||
T Consensus 347 ------------------------------------------------------~~~a~fS~~G~~~-------~di~AP 365 (471)
T 3t41_A 347 ------------------------------------------------------SNLSEFSNFGMNY-------TDIAAP 365 (471)
T ss_dssp ------------------------------------------------------SSBCTTCCBCTTT-------CCEEEE
T ss_pred ------------------------------------------------------CCCCCccCCCCCC-------CeEEec
Confidence 3688999999974 699999
Q ss_pred CCC----------------------EeeccCCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCC-CCCHHH
Q 044427 461 GVD----------------------ILASWSPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHP-NWSPSS 517 (734)
Q Consensus 461 G~~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P-~ls~~~ 517 (734)
|++ |+++++. +.|..++|||||||||||++|||+|++| .|+|++
T Consensus 366 G~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~-------------~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~ 432 (471)
T 3t41_A 366 GGSFAYLNQFGVDKWMNEGYMHKENILTTANN-------------GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDK 432 (471)
T ss_dssp CCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred CCCcccccccccccccccccccCceeEecCCC-------------CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHH
Confidence 987 8888876 7899999999999999999999999999 899999
Q ss_pred HHHHHHhccccccCCCcccCCCCCCCCccCccccCCC
Q 044427 518 IKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAIDP 554 (734)
Q Consensus 518 vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 554 (734)
||++|++||.+... . .+..||||+||+.+|++.
T Consensus 433 v~~~L~~tA~~~~~--~--~~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 433 AIELLYQHGTSKNN--K--PFSRYGHGELDVYKALNV 465 (471)
T ss_dssp HHHHHHHHSBCCSC--C--CHHHHTTCBBCHHHHTTT
T ss_pred HHHHHHHhCCCCCC--C--CcCccccChhCHHHHHHH
Confidence 99999999998765 1 378999999999999985
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.3e-53 Score=477.24 Aligned_cols=376 Identities=22% Similarity=0.302 Sum_probs=271.0
Q ss_pred cccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCC
Q 044427 82 MGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPR 161 (734)
Q Consensus 82 ~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~ 161 (734)
+++++.|... |+||+|||||||||++||+|.+. ++..+++.... +...+.
T Consensus 11 i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~-----------------------~~~~~~~~~~~-----~~~~~~ 60 (441)
T 1y9z_A 11 VGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN-----------------------NVTGTNNSGTG-----NWYQPG 60 (441)
T ss_dssp TTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS-----------------------EEEECCCTTSC-----CTTCCC
T ss_pred cChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC-----------------------cccCcccCCCC-----CCCCCC
Confidence 5555567543 77999999999999999999742 22222222211 123567
Q ss_pred CCCCChHHHHHHhccCCCCCCccccccccceeeecCCC--eEEEEEEecCCC-CCHHHHHHHHHHHHhC-CCcEEEEccC
Q 044427 162 DSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNA--RISMYKVCWSDG-CATADILAAFDDAIAD-GVDIISVSLG 237 (734)
Q Consensus 162 D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A--~L~~~kv~~~~g-~~~~~i~~ai~~ai~~-g~dVINlSlG 237 (734)
|..||||||||||+|..+. .| +.||||+| +|+.+|+++..+ ++.+++++||+||+++ |++|||||||
T Consensus 61 d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vin~S~G 131 (441)
T 1y9z_A 61 NNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLG 131 (441)
T ss_dssp SSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEECCC
T ss_pred CCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEEEeCCC
Confidence 8899999999999997532 12 38999995 999999999877 7788999999999999 9999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEE------------------
Q 044427 238 SDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQ------------------ 299 (734)
Q Consensus 238 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~------------------ 299 (734)
.... ...+..++.++.++|++||+||||+|.....++...+++|+|||++.+......
T Consensus 132 ~~~~----~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG~~i~s 207 (441)
T 1y9z_A 132 GSGS----TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILS 207 (441)
T ss_dssp BSCC----BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEECSSEEE
T ss_pred CCCC----CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEeccCCeec
Confidence 8732 245677888899999999999999998777778888999999998766432111
Q ss_pred -EEeCCCe----EeeeeecccCCC-C-Cceee--eEEcCCCcccCCCCCcccccccccc--cCCCCCcCceEEEEeeCCc
Q 044427 300 -AVLGNGI----TYPGLSINSFDL-N-GISYP--LIWGGDAANYSAGANPDIARFCAAD--ALNSYKVEGKIVFCESLLD 368 (734)
Q Consensus 300 -~~~~~g~----~~~g~~~~~~~~-~-~~~~p--l~~~~~~~~~~~~~~~~~~~~c~~~--~~~~~~~~gkiv~~~~~~~ 368 (734)
...+++. .+.|.+++.... + ...++ +.+....... ........|... .++..+++|||++|+|+.+
T Consensus 208 ~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g---~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg~~ 284 (441)
T 1y9z_A 208 TVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINA---SATGALAECTVNGTSFSCGNMANKICLVERVGN 284 (441)
T ss_dssp ECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCC---EEEEEEEEEEEETTEEECCCCTTEEEEEECCSC
T ss_pred cccCCCcccceeecccccccccccCcccccccCCcccccccccc---ccccchhccccccccccCCCccccEEEEecccc
Confidence 0111111 122222221110 0 00000 0111000000 001123458754 5678899999999999753
Q ss_pred ----------chhhhccCceEEEEecCCccC---------cccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEeccee
Q 044427 369 ----------GSDILAVNGLGTIMADSVFTD---------LAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETW 429 (734)
Q Consensus 369 ----------~~~~~~~Ga~g~i~~n~~~~~---------~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~ 429 (734)
..+++++|+.|+|++|+.... ......+|.+.++..++..|+.++... .
T Consensus 285 ~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~-------- 352 (441)
T 1y9z_A 285 QGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----T-------- 352 (441)
T ss_dssp SSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----E--------
T ss_pred CcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----c--------
Confidence 678899999999999886421 134567999999999999998876321 0
Q ss_pred ecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhh
Q 044427 430 KDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAA 509 (734)
Q Consensus 430 ~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~ 509 (734)
.+ +... .+.|..++|||||||||||++|||+|+
T Consensus 353 --------------------------t~--------~~~~-------------~~~y~~~sGTSmAaP~VAG~aALl~~~ 385 (441)
T 1y9z_A 353 --------------------------TV--------SNQG-------------NQDYEYYNGTSMATPHVSGVATLVWSY 385 (441)
T ss_dssp --------------------------EE--------EEEE-------------EESEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------cc--------cccc-------------CCCceeecccccCCcccchHHHHHHHH
Confidence 01 1111 268999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccccCCCceeccCCchhhhhhhhccCCCc
Q 044427 510 HPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAIDPGLVYDATEVDYVNFLCKQGYNT 576 (734)
Q Consensus 510 ~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~d~~~~l~~~~~~~ 576 (734)
||+|+|++||++||+||++++..+. +.+||+|+||+.+|+ ||+.|||++++.+
T Consensus 386 ~p~~sp~~ik~~L~~TA~~~~~~g~---~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~~ 438 (441)
T 1y9z_A 386 HPECSASQVRAALNATADDLSVAGR---DNQTGYGMINAVAAK-----------AYLDESCTGPTDP 438 (441)
T ss_dssp CTTSCHHHHHHHHHHHSBCCSSSSC---BTTTBTCBCCHHHHH-----------HHHHHCTTCC---
T ss_pred CCCCCHHHHHHHHHhhchhhccCCC---cccccccccCHHHHH-----------HHHHhhhcCCCCC
Confidence 9999999999999999999887654 678999999999995 6999999988754
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=7.9e-52 Score=476.82 Aligned_cols=347 Identities=21% Similarity=0.255 Sum_probs=260.5
Q ss_pred CcceEEEecceeeEEEEEeCH----HHHHHHh--cCCCeeEEEeCccccccc----C-----------------------
Q 044427 30 KESLVYSYGRSFNGFAAKLTD----EEVARFS--ETEGVISVIPNHKLKIHT----T----------------------- 76 (734)
Q Consensus 30 ~~~v~~~y~~~~ng~s~~~~~----~~i~~L~--~~p~V~~v~~~~~~~~~~----~----------------------- 76 (734)
+.++.+++ ..+++++++++. +.+++|+ ++|+|++|+|+..+++.. .
T Consensus 52 g~~v~~~~-~~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (671)
T 1r6v_A 52 NGKVVLEL-PQIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEE 130 (671)
T ss_dssp TCEEEEEE-GGGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSST
T ss_pred CCeEEEEc-CCCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCccccccccccccccccccccccc
Confidence 45788888 568999999864 3456776 489999999997655321 0
Q ss_pred ---CCcc--ccccccC-ccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCC
Q 044427 77 ---RSWD--FMGFSKG-KLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSEN 150 (734)
Q Consensus 77 ---~s~~--~~g~~~~-~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~ 150 (734)
..|. .++++.+ |.. .+|+||+|||||||||++||+|.+.- +.++++..+.
T Consensus 131 ~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~~-----------------------~~g~~~~~~~ 186 (671)
T 1r6v_A 131 LSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQV-----------------------IAGYRPAFDE 186 (671)
T ss_dssp TGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTTB-----------------------CCEEEGGGTE
T ss_pred ccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCccccccE-----------------------EecccccCCC
Confidence 0111 1344445 655 89999999999999999999997431 1111111111
Q ss_pred ccccCCCCCCCCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecC------CC-CCHHHHHHHHHH
Q 044427 151 IYEVTDFHSPRDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWS------DG-CATADILAAFDD 223 (734)
Q Consensus 151 ~~~~~~~~~~~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~------~g-~~~~~i~~ai~~ 223 (734)
.. + ...+..|..||||||||||||..+. .| +.||||+|+|+.+|+++. .+ .....+++||+|
T Consensus 187 ~~-p-~~~d~~d~~gHGThVAGiIAa~~ng----~g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~ 255 (671)
T 1r6v_A 187 EL-P-AGTDSSYGGSAGTHVAGTIAAKKDG----KG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIW 255 (671)
T ss_dssp EE-C-TTCBCCTTCSHHHHHHHHHHCCCSS----SS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHH
T ss_pred cC-C-CCCCCccCCCcchhhhhhhhccCCC----Cc-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHH
Confidence 00 0 0123446789999999999997421 12 389999999999999986 22 345678999999
Q ss_pred HHhCCCcEEEEccCCCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCC-CCcCCCCCceEEecccccCceeEEEEEe
Q 044427 224 AIADGVDIISVSLGSDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDP-YSVSNFAPWTLTVAASSIDRKFVAQAVL 302 (734)
Q Consensus 224 ai~~g~dVINlSlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~ap~vitVga~~~~~~~~~~~~~ 302 (734)
|+++|++|||||||... ....+..++.+|.++|++||+||||+|... ..++...|++|+|||++.+..
T Consensus 256 A~~~gadVIN~SlG~~~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~------- 324 (671)
T 1r6v_A 256 ATDHGAKVMNHSWGGWG----YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG------- 324 (671)
T ss_dssp HHHTTCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT-------
T ss_pred HHHcCCCEEEeCCCCCC----CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC-------
Confidence 99999999999999862 245678888899999999999999999765 455667789999998643200
Q ss_pred CCCeEeeeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEE
Q 044427 303 GNGITYPGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIM 382 (734)
Q Consensus 303 ~~g~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~ 382 (734)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCccCcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCC
Q 044427 383 ADSVFTDLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGV 462 (734)
Q Consensus 383 ~n~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~ 462 (734)
...++.||++||.. ||+|||+
T Consensus 325 ---------------------------------------------------~~~~a~fSn~G~~v--------dv~APG~ 345 (671)
T 1r6v_A 325 ---------------------------------------------------TFRVAGFSSRSDGV--------SVGAPGV 345 (671)
T ss_dssp ---------------------------------------------------EEEECSSSCCCTTE--------EEEEECS
T ss_pred ---------------------------------------------------ceeeccccCCCCCe--------eEEecCC
Confidence 01478999999976 9999999
Q ss_pred CEeeccCCCCCCC-----CCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCcccC
Q 044427 463 DILASWSPVAPPS-----LDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQEDL 537 (734)
Q Consensus 463 ~I~sa~~~~~~~~-----~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~~~~ 537 (734)
+|+++++...... ........+.|..++|||||||||||++|||+|++|+|++.+||++|++||+++...+.
T Consensus 346 ~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g~--- 422 (671)
T 1r6v_A 346 TILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNGW--- 422 (671)
T ss_dssp SEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSSC---
T ss_pred CEEeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCCC---
Confidence 9999987532110 00111223579999999999999999999999999999999999999999999877654
Q ss_pred CCCCCCCccCccccCCCceeccCCchhh
Q 044427 538 EFAYGSGHINPAQAIDPGLVYDATEVDY 565 (734)
Q Consensus 538 ~~~~G~G~vn~~~Al~~~lv~~~~~~d~ 565 (734)
+..||||+||+.+|++..|..+....+|
T Consensus 423 d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 423 DHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp BTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred CCCcccceeCHHHHhhhhcCCCCCccce
Confidence 6789999999999999877766554444
No 9
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=4.8e-51 Score=429.25 Aligned_cols=262 Identities=26% Similarity=0.325 Sum_probs=215.9
Q ss_pred ccccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCC
Q 044427 81 FMGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSP 160 (734)
Q Consensus 81 ~~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~ 160 (734)
.++++..|..+..|+||+|||||||||++||+|.+ +++..++|.++. ..+
T Consensus 17 ~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~-----------------------~~~~~~~~~~~~-------~~~ 66 (280)
T 1dbi_A 17 NTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG-----------------------KVIKGYDFVDND-------YDP 66 (280)
T ss_dssp GGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTT-----------------------TEEEEEETTTTB-------SCC
T ss_pred hcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhcc-----------------------CcccceeccCCC-------CCC
Confidence 35555678888778899999999999999999963 255566776542 346
Q ss_pred CCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCC
Q 044427 161 RDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIADGVDIISVSLGSD 239 (734)
Q Consensus 161 ~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~g~dVINlSlG~~ 239 (734)
.|..+|||||||||+|...++ .| +.||||+|+|+.+|+++..+ ++.+++++||+||+++|++|||||||..
T Consensus 67 ~d~~gHGT~vAgiia~~~~~~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~ 138 (280)
T 1dbi_A 67 MDLNNHGTHVAGIAAAETNNA---TG-----IAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLGCD 138 (280)
T ss_dssp CCSSSHHHHHHHHHHCCCSSS---SS-----CCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCSSC
T ss_pred CCCCCcHHHHHHHHhCcCCCC---Cc-----ceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCC
Confidence 788999999999999986432 12 38999999999999998766 7788999999999999999999999987
Q ss_pred CCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCC
Q 044427 240 FPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLN 319 (734)
Q Consensus 240 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~ 319 (734)
. ....+..++.++.++|++||+||||+|......+...+++|+|||++..
T Consensus 139 ~----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------------------- 188 (280)
T 1dbi_A 139 C----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY-------------------------- 188 (280)
T ss_dssp C----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT--------------------------
T ss_pred C----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC--------------------------
Confidence 3 2456788888899999999999999998766667778899999985422
Q ss_pred CceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceE
Q 044427 320 GISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPAT 399 (734)
Q Consensus 320 ~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~ 399 (734)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCC
Q 044427 400 LISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPE 479 (734)
Q Consensus 400 ~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~ 479 (734)
+.++.||++||.. ||+|||++|+++++.
T Consensus 189 -----------------------------------~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~--------- 216 (280)
T 1dbi_A 189 -----------------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTITG--------- 216 (280)
T ss_dssp -----------------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEETT---------
T ss_pred -----------------------------------CCcCCCCCCCCCc--------eEEEecCCeEeecCC---------
Confidence 2678899999864 999999999999876
Q ss_pred CCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccccCC
Q 044427 480 DTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAID 553 (734)
Q Consensus 480 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~ 553 (734)
+.|..++|||||||||||++|||++ |.+++.+||++|++||+++... ...||||+||+.+|++
T Consensus 217 ----~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~-----~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 217 ----NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT-----GTYFKYGRINSYNAVT 279 (280)
T ss_dssp ----TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB-----TTTBSSEECCHHHHHT
T ss_pred ----CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC-----CCcccCCEECHHHHhc
Confidence 7899999999999999999999987 8999999999999999998754 4679999999999986
No 10
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=2.1e-51 Score=430.88 Aligned_cols=259 Identities=29% Similarity=0.442 Sum_probs=218.6
Q ss_pred cccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCC
Q 044427 82 MGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPR 161 (734)
Q Consensus 82 ~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~ 161 (734)
++++..|..+++|+||+|+|||||||++||+|+ +..+++|..+. ..+.
T Consensus 11 i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-------------------------~~~g~~~~~~~-------~~~~ 58 (274)
T 1r0r_E 11 IKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-------------------------VVGGASFVAGE-------AYNT 58 (274)
T ss_dssp TTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-------------------------EEEEEECSTTC-------CTTC
T ss_pred cCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-------------------------CCCCccccCCC-------CCCC
Confidence 455557888999999999999999999999994 33445565432 2356
Q ss_pred CCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCC
Q 044427 162 DSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIADGVDIISVSLGSDF 240 (734)
Q Consensus 162 D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~g~dVINlSlG~~~ 240 (734)
|..||||||||||+|..+. .| +.||||+|+|+.+|+++..+ ++.+++++||+||++++++|||||||...
T Consensus 59 d~~gHGT~vAgiia~~~~~----~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~ 129 (274)
T 1r0r_E 59 DGNGHGTHVAGTVAALDNT----TG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLGGAS 129 (274)
T ss_dssp CSSSHHHHHHHHHHCCSSS----SB-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBSS
T ss_pred CCCCCHHHHHHHHHccCCC----Cc-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeCCCCCC
Confidence 7899999999999997321 12 38999999999999998766 67889999999999999999999999873
Q ss_pred CCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCC----CCcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccC
Q 044427 241 PFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDP----YSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSF 316 (734)
Q Consensus 241 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~ 316 (734)
....+..++.++.++|++||+||||+|... ..++...+++|+||+++.+
T Consensus 130 ----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~----------------------- 182 (274)
T 1r0r_E 130 ----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN----------------------- 182 (274)
T ss_dssp ----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT-----------------------
T ss_pred ----CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC-----------------------
Confidence 245678888899999999999999999763 2345566888888875422
Q ss_pred CCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCc
Q 044427 317 DLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPL 396 (734)
Q Consensus 317 ~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~ 396 (734)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCC
Q 044427 397 PATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSL 476 (734)
Q Consensus 397 p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~ 476 (734)
+.++.||++||. |||+|||.+|+++++.
T Consensus 183 --------------------------------------~~~~~~S~~G~~--------~di~APG~~i~s~~~~------ 210 (274)
T 1r0r_E 183 --------------------------------------SNRASFSSVGAE--------LEVMAPGAGVYSTYPT------ 210 (274)
T ss_dssp --------------------------------------SCBCTTCCCSTT--------EEEEEECSSEEEEETT------
T ss_pred --------------------------------------CCcCccCCCCCC--------ceEEeCCCCeEeecCC------
Confidence 357889999985 4999999999999876
Q ss_pred CCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccccCC
Q 044427 477 DPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAID 553 (734)
Q Consensus 477 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~ 553 (734)
+.|..++|||||||||||++|||+|++|.|++.+||++|++||+++.. +..||||+||+.+|++
T Consensus 211 -------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g~------~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 211 -------NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLGS------SFYYGKGLINVEAAAQ 274 (274)
T ss_dssp -------TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCSC------HHHHTTCBCCHHHHTC
T ss_pred -------CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccCC------CCCcccCccCHHHHhC
Confidence 789999999999999999999999999999999999999999998852 6789999999999985
No 11
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=3.2e-51 Score=427.86 Aligned_cols=258 Identities=30% Similarity=0.441 Sum_probs=220.7
Q ss_pred cccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCC
Q 044427 82 MGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPR 161 (734)
Q Consensus 82 ~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~ 161 (734)
++++..|..+++|+||+|+|||||| .+||+|+ +...++|..+. ..+.
T Consensus 11 i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-------------------------~~~~~~~~~~~-------~~~~ 57 (269)
T 1gci_A 11 VQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-------------------------IRGGASFVPGE-------PSTQ 57 (269)
T ss_dssp TTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-------------------------EEEEEECSTTC-------CSCS
T ss_pred cCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-------------------------ccCCcccCCCC-------CCCC
Confidence 4555678889999999999999999 8999994 33445565432 2356
Q ss_pred CCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCC
Q 044427 162 DSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIADGVDIISVSLGSDF 240 (734)
Q Consensus 162 D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~g~dVINlSlG~~~ 240 (734)
|..||||||||||+|..+. .| +.||||+|+|+.+|+++..+ ++.+++++||+||++++++|||||||...
T Consensus 58 d~~gHGT~vAgiia~~~~~----~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G~~~ 128 (269)
T 1gci_A 58 DGNGHGTHVAGTIAALNNS----IG-----VLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSPS 128 (269)
T ss_dssp CSSSHHHHHHHHHHCCCSS----SB-----CCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCCBSS
T ss_pred CCCCChHHHHHHHhcCcCC----CC-----cEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCCCCCC
Confidence 8899999999999997321 12 38999999999999998766 67889999999999999999999999873
Q ss_pred CCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCCC
Q 044427 241 PFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLNG 320 (734)
Q Consensus 241 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 320 (734)
....+..++.++.++|++||+||||+|.....++...+++|+||+++.+
T Consensus 129 ----~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------------------- 177 (269)
T 1gci_A 129 ----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN--------------------------- 177 (269)
T ss_dssp ----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT---------------------------
T ss_pred ----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC---------------------------
Confidence 2356788888899999999999999998776777778999999985422
Q ss_pred ceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceEE
Q 044427 321 ISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPATL 400 (734)
Q Consensus 321 ~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~ 400 (734)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCC
Q 044427 401 ISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPED 480 (734)
Q Consensus 401 i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 480 (734)
+.++.||++||.. ||+|||++|+++++.
T Consensus 178 ----------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~---------- 205 (269)
T 1gci_A 178 ----------------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYPG---------- 205 (269)
T ss_dssp ----------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETT----------
T ss_pred ----------------------------------CCCCCCCCCCCCc--------ceEecCCCeEeecCC----------
Confidence 2578899999965 999999999999876
Q ss_pred CCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccccCC
Q 044427 481 TRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAID 553 (734)
Q Consensus 481 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~ 553 (734)
+.|..++|||||||||||++|||+|++|+|++.+||++|++||++++. +..||||+||+.+|++
T Consensus 206 ---~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g~------~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 206 ---STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLGS------TNLYGSGLVNAEAATR 269 (269)
T ss_dssp ---TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCSC------HHHHTTCBCCHHHHTC
T ss_pred ---CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCC------CCCcccCccCHHHHcC
Confidence 789999999999999999999999999999999999999999998852 6789999999999985
No 12
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=6.1e-51 Score=428.69 Aligned_cols=261 Identities=28% Similarity=0.423 Sum_probs=218.7
Q ss_pred cccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCC
Q 044427 82 MGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPR 161 (734)
Q Consensus 82 ~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~ 161 (734)
++++..|..+++|+||+|||||||||++||+|+ +..+++|..+.. ....
T Consensus 11 i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-------------------------~~~g~~~~~~~~------~~~~ 59 (281)
T 1to2_E 11 IKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLK-------------------------VAGGASMVPSET------NPFQ 59 (281)
T ss_dssp TTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-------------------------EEEEEECCTTCC------CTTC
T ss_pred cChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHc-------------------------CcCCccccCCCC------CCCC
Confidence 455557888999999999999999999999994 233445543321 2236
Q ss_pred CCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCC
Q 044427 162 DSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIADGVDIISVSLGSDF 240 (734)
Q Consensus 162 D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~g~dVINlSlG~~~ 240 (734)
|..||||||||||+|..+. .| +.||||+|+|+.+|+++..+ +..++++++|+|+++++++|||||||...
T Consensus 60 d~~gHGT~vAgiia~~~~~----~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~ 130 (281)
T 1to2_E 60 DNNSHGTHVAGTVAALNNS----IG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGPS 130 (281)
T ss_dssp CSSSHHHHHHHHHHCCSSS----SS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBSC
T ss_pred CCCCcHHHHHHHHhccCCC----Cc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEECCcCCC
Confidence 7899999999999997421 12 38999999999999998766 67889999999999999999999999873
Q ss_pred CCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCC----CCcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccC
Q 044427 241 PFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDP----YSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSF 316 (734)
Q Consensus 241 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~ 316 (734)
....+..++.++.++|++||+||||+|... ..++...|++|+|||++..
T Consensus 131 ----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~----------------------- 183 (281)
T 1to2_E 131 ----GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS----------------------- 183 (281)
T ss_dssp ----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT-----------------------
T ss_pred ----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC-----------------------
Confidence 245778888889999999999999999763 2345566888888875321
Q ss_pred CCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCc
Q 044427 317 DLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPL 396 (734)
Q Consensus 317 ~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~ 396 (734)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCC
Q 044427 397 PATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSL 476 (734)
Q Consensus 397 p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~ 476 (734)
+.++.||++||. |||+|||.+|+++++.
T Consensus 184 --------------------------------------~~~~~fS~~G~~--------~di~APG~~i~s~~~~------ 211 (281)
T 1to2_E 184 --------------------------------------NQRASFSSVGPE--------LDVMAPGVSIQSTLPG------ 211 (281)
T ss_dssp --------------------------------------SCBCTTCCCSTT--------CCEEEECSSEEEEETT------
T ss_pred --------------------------------------CCcCCcCCCCCC--------ceEEecCCCeEeecCC------
Confidence 367889999995 4999999999999876
Q ss_pred CCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccccCCC
Q 044427 477 DPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAIDP 554 (734)
Q Consensus 477 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 554 (734)
+.|..++|||||||+|||++|||+|++|+|++.+||++|++||++++. ++.||||+||+.+|+++
T Consensus 212 -------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g~------~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 212 -------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGD------SFYYGKGLINVQAAAQH 276 (281)
T ss_dssp -------TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCSC------HHHHTTCBCCHHHHTSS
T ss_pred -------CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCC------CCCcccceecHHHHhhh
Confidence 789999999999999999999999999999999999999999998852 67899999999999985
No 13
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=6.6e-53 Score=458.67 Aligned_cols=304 Identities=20% Similarity=0.210 Sum_probs=200.0
Q ss_pred ccccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCccccccc-CC--cccCceeE----eeeecCCCCccc
Q 044427 81 FMGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTG-AN--FTCNNKII----GARYYNSENIYE 153 (734)
Q Consensus 81 ~~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~-~~--f~~n~ki~----g~~~~~~~~~~~ 153 (734)
..|+.+.|..+..|+||+|||||||||++||+|++..+.+....|+..++. .. +..+..+. ....+.......
T Consensus 17 ipG~~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (357)
T 4h6x_A 17 IPGLADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAV 96 (357)
T ss_dssp STTHHHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred ccCHHHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCccccccccccccccc
Confidence 346777888888899999999999999999999977666666677665543 10 00000000 000000000000
Q ss_pred cCCCCCCCCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC------CCHHHHHHHHHHHHhC
Q 044427 154 VTDFHSPRDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG------CATADILAAFDDAIAD 227 (734)
Q Consensus 154 ~~~~~~~~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g------~~~~~i~~ai~~ai~~ 227 (734)
..+...+.|.+||||||||||||+... .+.||||+|+|+.+|++.... ....++++||+||++.
T Consensus 97 ~~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~ 166 (357)
T 4h6x_A 97 IPDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALEL 166 (357)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHT
T ss_pred cCCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHc
Confidence 011123456789999999999997532 238999999999999975422 3455788999999999
Q ss_pred CCcEEEEccCCCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEEEEeCCCeE
Q 044427 228 GVDIISVSLGSDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQAVLGNGIT 307 (734)
Q Consensus 228 g~dVINlSlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~ 307 (734)
|++|||||||.........+.+..++.++.++|++||+||||+|.....++...|++|+|||++.+
T Consensus 167 g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------- 232 (357)
T 4h6x_A 167 GANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD-------------- 232 (357)
T ss_dssp TCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT--------------
T ss_pred CCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC--------------
Confidence 999999999987555566778888999999999999999999998777777778899999985432
Q ss_pred eeeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCc
Q 044427 308 YPGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVF 387 (734)
Q Consensus 308 ~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~ 387 (734)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeec
Q 044427 388 TDLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILAS 467 (734)
Q Consensus 388 ~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa 467 (734)
+.++.||+||+.. .||||+|||.+|+++
T Consensus 233 -----------------------------------------------~~~~~fSn~G~~~-----~~~di~APG~~i~s~ 260 (357)
T 4h6x_A 233 -----------------------------------------------GTPCHFSNWGGNN-----TKEGILAPGEEILGA 260 (357)
T ss_dssp -----------------------------------------------SSBCTTCC---CT-----TTTEEEEECSSEEEC
T ss_pred -----------------------------------------------CcccccccCCCCC-----CccceeecCCCeEec
Confidence 3678999999753 589999999999999
Q ss_pred cCCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHh----hCCCCCHHHHHHHHHhccccccCCCcccCCCCCCC
Q 044427 468 WSPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKA----AHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGS 543 (734)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~ 543 (734)
++.. +.|..++|||||||||||++|||++ ++|.|++++||++|++||++++..... .+.+|||
T Consensus 261 ~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~~~-~~~~~G~ 327 (357)
T 4h6x_A 261 QPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEVVE-EPERCLR 327 (357)
T ss_dssp CTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC---------------CTT
T ss_pred cCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCCCC-Cccccee
Confidence 8762 6678899999999999999999995 466899999999999999987654321 3678999
Q ss_pred CccCccccCC
Q 044427 544 GHINPAQAID 553 (734)
Q Consensus 544 G~vn~~~Al~ 553 (734)
|+||+.+|++
T Consensus 328 G~vn~~~A~~ 337 (357)
T 4h6x_A 328 GFVNIPGAMK 337 (357)
T ss_dssp CBCCHHHHHH
T ss_pred EEecHHHHHH
Confidence 9999999987
No 14
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=2e-50 Score=424.53 Aligned_cols=260 Identities=25% Similarity=0.385 Sum_probs=220.5
Q ss_pred cccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCC
Q 044427 82 MGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPR 161 (734)
Q Consensus 82 ~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~ 161 (734)
++++..|... +|+||+|||||||||++||+|.+ +++..++|.++. ..+.
T Consensus 18 i~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~-----------------------~~~~~~~~~~~~-------~~~~ 66 (279)
T 1thm_A 18 IQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAG-----------------------KVVGGWDFVDND-------STPQ 66 (279)
T ss_dssp TTHHHHHTTC-CCTTCEEEEEESCCCTTCTTTTT-----------------------TEEEEEETTTTB-------SCCC
T ss_pred CChHHHHhcC-CCCCCEEEEEccCCCCCCcchhc-----------------------CccccccccCCC-------CCCC
Confidence 4555567554 79999999999999999999963 355666776543 3457
Q ss_pred CCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhCCCcEEEEccCCCC
Q 044427 162 DSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIADGVDIISVSLGSDF 240 (734)
Q Consensus 162 D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~g~dVINlSlG~~~ 240 (734)
|..+|||||||||+|...++ .| +.||||+|+|+.+|+++..+ ++..++++||+||+++|++|||||||...
T Consensus 67 d~~gHGT~vAgiia~~~~n~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~ 138 (279)
T 1thm_A 67 NGNGHGTHCAGIAAAVTNNS---TG-----IAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTV 138 (279)
T ss_dssp CSSSHHHHHHHHHHCCCSSS---SS-----CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCBSS
T ss_pred CCCCcHHHHHHHHhCccCCC---Cc-----cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 88999999999999986432 12 38999999999999998766 67889999999999999999999999873
Q ss_pred CCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCCC
Q 044427 241 PFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLNG 320 (734)
Q Consensus 241 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 320 (734)
....+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 139 ----~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------------------- 187 (279)
T 1thm_A 139 ----GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN--------------------------- 187 (279)
T ss_dssp ----CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT---------------------------
T ss_pred ----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC---------------------------
Confidence 2456788888999999999999999998776777778899999985422
Q ss_pred ceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceEE
Q 044427 321 ISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPATL 400 (734)
Q Consensus 321 ~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~ 400 (734)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCC
Q 044427 401 ISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPED 480 (734)
Q Consensus 401 i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 480 (734)
+.++.||++||.. ||+|||++|+++++.
T Consensus 188 ----------------------------------~~~~~fS~~G~~~--------dv~APG~~i~s~~~~---------- 215 (279)
T 1thm_A 188 ----------------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYPT---------- 215 (279)
T ss_dssp ----------------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEETT----------
T ss_pred ----------------------------------CCcCCcCCCCCce--------EEEEcCCCeEEEeCC----------
Confidence 2578899999864 999999999999876
Q ss_pred CCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccccCC
Q 044427 481 TRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAID 553 (734)
Q Consensus 481 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~ 553 (734)
+.|..++|||||||||||++||| ++|.+++++||++|++||+++...+ ..||||+||+.+|++
T Consensus 216 ---~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~-----~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 216 ---STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG-----TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ---TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT-----TTBSSEECCHHHHHH
T ss_pred ---CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC-----ccccCCeeCHHHHhc
Confidence 78999999999999999999999 5799999999999999999987653 579999999999975
No 15
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=8e-53 Score=481.92 Aligned_cols=301 Identities=19% Similarity=0.223 Sum_probs=41.3
Q ss_pred CcceEEEecceeeEEEEEeCHHHHHHHhcCCCeeEEEeCcccccccCCCcccccccc------CccCCCCCCCCEEEEEc
Q 044427 30 KESLVYSYGRSFNGFAAKLTDEEVARFSETEGVISVIPNHKLKIHTTRSWDFMGFSK------GKLSSSQEGSVIIGLLD 103 (734)
Q Consensus 30 ~~~v~~~y~~~~ng~s~~~~~~~i~~L~~~p~V~~v~~~~~~~~~~~~s~~~~g~~~------~~~~~~~G~GV~VgVID 103 (734)
..++++.|+++|+||+++++.+++++|+++|+|++|+|++.+... ...|.+-.+.. .|..+.+|+||+|+|||
T Consensus 108 ~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~-~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVID 186 (692)
T 2p4e_P 108 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ-SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLD 186 (692)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC-----------------------------------
T ss_pred ccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC-CCCcchhhcccccccccccccCCCCCCcEEEEEc
Confidence 468999999999999999999999999999999999999977652 23455433322 45678899999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCCCCChHHHHHHhccCCCCCCc
Q 044427 104 TGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDSEGHGTHTSSTAAGREVPHAS 183 (734)
Q Consensus 104 tGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~~gHGThVAGi~AG~~~~~~~ 183 (734)
||||++||+|.+... |. .+++..+.+. ......+.|..||||||||||+|+.
T Consensus 187 TGId~~HpdL~gr~~------~~----------------~~~~~~d~dg-~~~~~~~~D~~GHGTHVAGiIAg~~----- 238 (692)
T 2p4e_P 187 TSIQSDHREIEGRVM------VT----------------DFENVPEEDG-TRFHRQASKCDSHGTHLAGVVSGRD----- 238 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCChhhcCceE------ec----------------ccccccCCCC-CcccCCCCCCCCcHHHhhhHhhcCC-----
Confidence 999999999975411 10 0011100000 0001346789999999999999873
Q ss_pred cccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhC------CCcEEEEccCCCCCCCCCCCHHHHHHHHH
Q 044427 184 YYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIAD------GVDIISVSLGSDFPFEYFEDPIAIGSFHA 256 (734)
Q Consensus 184 ~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~------g~dVINlSlG~~~~~~~~~~~~~~a~~~a 256 (734)
.||||+|+|+++|++++.| ++.+++++||+|++++ +++|||||||+.. ...+..++.++
T Consensus 239 ---------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~-----s~~l~~Ai~~A 304 (692)
T 2p4e_P 239 ---------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY-----SRVLNAACQRL 304 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC-----cHHHHHHHHHH
Confidence 7999999999999998876 6788999999999986 8999999999762 24566667788
Q ss_pred HhCCcEEEEcCCCCCCCCCC-cCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCCCceeeeEEcCCCcccC
Q 044427 257 MKYGILTSNSAGNSGPDPYS-VSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLNGISYPLIWGGDAANYS 335 (734)
Q Consensus 257 ~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~ 335 (734)
.++|++||+||||+|..... .+...|++|+|||++.+...
T Consensus 305 ~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~--------------------------------------- 345 (692)
T 2p4e_P 305 ARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP--------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc---------------------------------------
Confidence 89999999999999976543 35667999999996543100
Q ss_pred CCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceEEeeccchHHHHHHHhc
Q 044427 336 AGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPATLISKENGQDILDYIRS 415 (734)
Q Consensus 336 ~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~ 415 (734)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCCCCCcceEEeccccch
Q 044427 416 TEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPEDTRSVSFNIISGTSMS 495 (734)
Q Consensus 416 ~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmA 495 (734)
...-+.||+||| ||||+|||++|+++++.. .+.|..++|||||
T Consensus 346 ------------------a~~ss~fSn~G~--------~vDI~APG~~I~St~~~~-----------~~~y~~~SGTSmA 388 (692)
T 2p4e_P 346 ------------------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSDC-----------STCFVSQSGTSQA 388 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------cccccccCCCCC--------ceeEEecCCcEEeeccCC-----------CCceEeccchHHH
Confidence 000123899998 469999999999998762 2578999999999
Q ss_pred hhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 044427 496 CPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVM 529 (734)
Q Consensus 496 aP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~ 529 (734)
||||||++|||+|++|+|+|++||++|++||.+.
T Consensus 389 APhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 389 AAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp ----------------------------------
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999764
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.9e-50 Score=433.81 Aligned_cols=267 Identities=25% Similarity=0.325 Sum_probs=218.1
Q ss_pred ccccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCC
Q 044427 81 FMGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSP 160 (734)
Q Consensus 81 ~~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~ 160 (734)
.++++..|..+++|+||+|||||||||++||+|.+ ++..+++|..++.. +....
T Consensus 27 ~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~-----------------------~~~~~~~~~~~~~~---~~~~~ 80 (327)
T 2x8j_A 27 IVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAE-----------------------RIIGGVNLTTDYGG---DETNF 80 (327)
T ss_dssp HTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG-----------------------GEEEEEECSSGGGG---CTTCC
T ss_pred hcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh-----------------------cccCCccccCCCCC---CCCCC
Confidence 35666678888999999999999999999999963 35566667654321 11235
Q ss_pred CCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHh------CCCcEEE
Q 044427 161 RDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIA------DGVDIIS 233 (734)
Q Consensus 161 ~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~------~g~dVIN 233 (734)
.|..||||||||||+|..+. .| +.||||+|+|+.+|+++..+ ++.+++++||+||++ .+++|||
T Consensus 81 ~d~~gHGT~VAgiia~~~~~----~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~Vin 151 (327)
T 2x8j_A 81 SDNNGHGTHVAGTVAAAETG----SG-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRIIT 151 (327)
T ss_dssp CCSSSHHHHHHHHHHCCCCS----SB-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSEEE
T ss_pred CCCCCchHHHHHHHhccCCC----CC-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceEEE
Confidence 68899999999999998421 12 38999999999999998776 678899999999999 8999999
Q ss_pred EccCCCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCC-----CCcCCCCCceEEecccccCceeEEEEEeCCCeEe
Q 044427 234 VSLGSDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDP-----YSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITY 308 (734)
Q Consensus 234 lSlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~ 308 (734)
||||... ....+..++.++.++|++||+||||+|... ...+...+++|+|||++.+
T Consensus 152 ~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~--------------- 212 (327)
T 2x8j_A 152 MSLGGPT----DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD--------------- 212 (327)
T ss_dssp ECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT---------------
T ss_pred ECCCcCC----CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC---------------
Confidence 9999873 235677888889999999999999999753 2445567899999885422
Q ss_pred eeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCcc
Q 044427 309 PGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFT 388 (734)
Q Consensus 309 ~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 388 (734)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeecc
Q 044427 389 DLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASW 468 (734)
Q Consensus 389 ~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~ 468 (734)
+.++.||++||. |||+|||++|++++
T Consensus 213 ----------------------------------------------~~~~~fS~~G~~--------~di~APG~~i~s~~ 238 (327)
T 2x8j_A 213 ----------------------------------------------LRLSDFTNTNEE--------IDIVAPGVGIKSTY 238 (327)
T ss_dssp ----------------------------------------------CCBSCC---CCC--------CSEEEECSSEEEEC
T ss_pred ----------------------------------------------CCCCCccCCCCC--------ceEecCcCceEeec
Confidence 367889999984 59999999999998
Q ss_pred CCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhh-----CCCCCHHHHHHHHHhccccccCCCcccCCCCCCC
Q 044427 469 SPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAA-----HPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGS 543 (734)
Q Consensus 469 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~ 543 (734)
+. +.|..++|||||||+|||++|||+|+ +|.|++.+||++|++||++++. .+..+||
T Consensus 239 ~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~-----~~~~~G~ 300 (327)
T 2x8j_A 239 LD-------------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF-----TAQAEGN 300 (327)
T ss_dssp ST-------------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS-----CHHHHTT
T ss_pred CC-------------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC-----CCCceee
Confidence 76 67999999999999999999999999 9999999999999999998753 2778999
Q ss_pred CccCccccCC
Q 044427 544 GHINPAQAID 553 (734)
Q Consensus 544 G~vn~~~Al~ 553 (734)
|+||+.+|++
T Consensus 301 G~vd~~~A~~ 310 (327)
T 2x8j_A 301 GFLTLDLVER 310 (327)
T ss_dssp CEECTTHHHH
T ss_pred eEECHHHHHH
Confidence 9999999988
No 17
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1.3e-50 Score=427.16 Aligned_cols=265 Identities=22% Similarity=0.247 Sum_probs=211.7
Q ss_pred CCCC-CCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCCCCChHH
Q 044427 91 SSQE-GSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDSEGHGTH 169 (734)
Q Consensus 91 ~~~G-~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~~gHGTh 169 (734)
.++| +||+|||||||||++||+|.+. .+..+++.... ......|..|||||
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~-----------------------~~~~~~~~~~~-----~~~~d~~~~gHGT~ 54 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA-----------------------DLTVLPTLAPT-----AARSDGFMSAHGTH 54 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC-----------------------EEEECCCSSCC-----CCCTTCHHHHHHHH
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC-----------------------eeecCcCCCCC-----CCCCCCCCCCcccc
Confidence 4678 7999999999999999999743 11222222211 11223345789999
Q ss_pred HHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC--CCHHHHHHHHHHHHhCCCcEEEEccCCCCCCCCCCC
Q 044427 170 TSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG--CATADILAAFDDAIADGVDIISVSLGSDFPFEYFED 247 (734)
Q Consensus 170 VAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g--~~~~~i~~ai~~ai~~g~dVINlSlG~~~~~~~~~~ 247 (734)
|||||+|+... .+.||||+|+|+.+|++.+.+ .+..++++||+||++++++|||||||..........
T Consensus 55 VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~ 124 (282)
T 3zxy_A 55 VASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADG 124 (282)
T ss_dssp HHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCH
T ss_pred eeehhhccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccccccccccH
Confidence 99999997532 238999999999999986543 677889999999999999999999997643344556
Q ss_pred HHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCCCceeeeEE
Q 044427 248 PIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLNGISYPLIW 327 (734)
Q Consensus 248 ~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~pl~~ 327 (734)
.+..++.++.++|+++|+||||+|......+...+++|+|||.+.+
T Consensus 125 ~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------------------------- 170 (282)
T 3zxy_A 125 WLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH---------------------------------- 170 (282)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT----------------------------------
T ss_pred HHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC----------------------------------
Confidence 6788888899999999999999998777777778999999985422
Q ss_pred cCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceEEeeccchH
Q 044427 328 GGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPATLISKENGQ 407 (734)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~~~ 407 (734)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCCCCCcceE
Q 044427 408 DILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPEDTRSVSFN 487 (734)
Q Consensus 408 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~ 487 (734)
+.++.||+||+.. .||||+|||.+|+++++. +.|.
T Consensus 171 ---------------------------~~~~~~S~~~~~~-----~~~di~ApG~~i~s~~~~-------------~~~~ 205 (282)
T 3zxy_A 171 ---------------------------GHPLDFSNWGSTY-----EQQGILAPGEDILGAKPG-------------GGTE 205 (282)
T ss_dssp ---------------------------SCBCSSSCCCHHH-----HHHEEEEECSSEEEECTT-------------SCEE
T ss_pred ---------------------------CccccccCCCCCc-----cccceeccCcceeeecCC-------------Ccee
Confidence 3577899998753 588999999999999886 7899
Q ss_pred EeccccchhhHHHHHHHHHHhhC----CCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccccCC
Q 044427 488 IISGTSMSCPHASGSAAYVKAAH----PNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAID 553 (734)
Q Consensus 488 ~~sGTSmAaP~VAG~aALl~q~~----P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~ 553 (734)
.++|||||||||||++|||+|++ |.++|++||++|++||++++.... .....+|+|+||+.+|++
T Consensus 206 ~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~~-~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 206 RLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDAP-EQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC--------CGGGTTCBCCHHHHHH
T ss_pred ecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCCCC-CccCceeeeEeCHHHHHH
Confidence 99999999999999999999874 789999999999999998765321 236789999999999986
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=4.9e-49 Score=420.87 Aligned_cols=280 Identities=29% Similarity=0.358 Sum_probs=224.4
Q ss_pred ccccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCC
Q 044427 81 FMGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSP 160 (734)
Q Consensus 81 ~~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~ 160 (734)
.++++..|..+++|+||+|||||||||++||+|.+. +...++|...... .....
T Consensus 12 ~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~-----------------------~~~~~~~~~~~~~---~~~~~ 65 (310)
T 2ixt_A 12 AIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN-----------------------VEQCKDFTGATTP---INNSC 65 (310)
T ss_dssp HHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT-----------------------EEEEEESSSSSSC---EETCC
T ss_pred hcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc-----------------------ccccccccCCCCC---CCCCC
Confidence 366677898999999999999999999999999642 4455666654211 11345
Q ss_pred CCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhCCC-----cEEEE
Q 044427 161 RDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIADGV-----DIISV 234 (734)
Q Consensus 161 ~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~g~-----dVINl 234 (734)
.|..||||||||||+|....+ ...+.||||+|+|+.+|++...+ .+.+++++||+||+++++ +||||
T Consensus 66 ~d~~gHGT~vAgiia~~~~~n-------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~Vin~ 138 (310)
T 2ixt_A 66 TDRNGHGTHVAGTALADGGSD-------QAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTIISM 138 (310)
T ss_dssp CCSSSHHHHHHHHHHCBCCTT-------SCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCCCHHHHHHHHhccCCCC-------CCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCeEEEE
Confidence 678999999999999985221 11238999999999999998766 678899999999999887 99999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCC--CCcCCCCCceEEecccccCceeEEEEEeCCCeEeeeee
Q 044427 235 SLGSDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDP--YSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLS 312 (734)
Q Consensus 235 SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~--~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~ 312 (734)
|||... ....+..++.++.++|++||+||||+|... ...+...+++|+|||++...
T Consensus 139 S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~------------------ 196 (310)
T 2ixt_A 139 SLGSSA----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ------------------ 196 (310)
T ss_dssp CCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE------------------
T ss_pred cCCCCC----CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc------------------
Confidence 999873 245677888889999999999999999764 34555678999999854210
Q ss_pred cccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCccc
Q 044427 313 INSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAF 392 (734)
Q Consensus 313 ~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~ 392 (734)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCC--ceeeccCCCCCCCC----CCCCCCcEEecCCCEee
Q 044427 393 SYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAP--KVVSFSSRGPNPIT----VDILKPDITAPGVDILA 466 (734)
Q Consensus 393 ~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~--~~a~fSS~Gpt~~~----~~~~KPDI~APG~~I~s 466 (734)
..+ .++.||++||.... ..+.||||+|||.+|++
T Consensus 197 ----------------------------------------~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s 236 (310)
T 2ixt_A 197 ----------------------------------------QNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYS 236 (310)
T ss_dssp ----------------------------------------ETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEE
T ss_pred ----------------------------------------cCCCeeeccccCCCCccCCccccccCCCeeEECCCCCEee
Confidence 001 57889999995311 12359999999999999
Q ss_pred ccCCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCC----cccCCCCCC
Q 044427 467 SWSPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRK----QEDLEFAYG 542 (734)
Q Consensus 467 a~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~----~~~~~~~~G 542 (734)
+++. +.|..++|||||||||||++|||+|++|.|++.+||++|++||++.+..+ .+..+..+|
T Consensus 237 ~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~a~~g~d~~~G 303 (310)
T 2ixt_A 237 TWYN-------------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAAIGDDYASG 303 (310)
T ss_dssp ECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBSTTCCSSSBTTTB
T ss_pred ecCC-------------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCCcccccCCccccc
Confidence 9876 67999999999999999999999999999999999999999999877432 112588999
Q ss_pred CCccCc
Q 044427 543 SGHINP 548 (734)
Q Consensus 543 ~G~vn~ 548 (734)
||++|+
T Consensus 304 ~G~~~v 309 (310)
T 2ixt_A 304 FGFARV 309 (310)
T ss_dssp TCBCCC
T ss_pred cceeec
Confidence 999986
No 19
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=2.9e-50 Score=429.71 Aligned_cols=276 Identities=24% Similarity=0.256 Sum_probs=221.1
Q ss_pred cccccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCC
Q 044427 80 DFMGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHS 159 (734)
Q Consensus 80 ~~~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~ 159 (734)
++.|++++|.....++||+|||||||||++||+|.+. .+....++..+. ...
T Consensus 6 ~i~G~~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~----------------------~~~~~~~~~~~~------~~~ 57 (306)
T 4h6w_A 6 NIPGLKKLWSETRGDPKICVAVLDGIVDQNHPCFIGA----------------------DLTRLPSLVSGE------ANA 57 (306)
T ss_dssp -CTTHHHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC----------------------EEEECC---------------
T ss_pred CCcCHHHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC----------------------cccCCCcccCCC------CCC
Confidence 3457777887766679999999999999999999743 222333333321 123
Q ss_pred CCCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC--CCHHHHHHHHHHHHhCCCcEEEEccC
Q 044427 160 PRDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG--CATADILAAFDDAIADGVDIISVSLG 237 (734)
Q Consensus 160 ~~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g--~~~~~i~~ai~~ai~~g~dVINlSlG 237 (734)
..|..||||||||||+|+... .+.||||+|+|+.+|++.+.+ .+..++++||+||++++++|||+|||
T Consensus 58 ~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g 127 (306)
T 4h6w_A 58 NGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAG 127 (306)
T ss_dssp -CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeecccc
Confidence 456789999999999997522 238999999999999987643 67788999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCC
Q 044427 238 SDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFD 317 (734)
Q Consensus 238 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 317 (734)
...........+..++.++.++|++||+||||+|......+...+++++|||++..
T Consensus 128 ~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~------------------------ 183 (306)
T 4h6w_A 128 QLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ------------------------ 183 (306)
T ss_dssp EEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT------------------------
T ss_pred ccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC------------------------
Confidence 76444455667888888999999999999999998776667777889999885422
Q ss_pred CCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcc
Q 044427 318 LNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLP 397 (734)
Q Consensus 318 ~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p 397 (734)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCC
Q 044427 398 ATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLD 477 (734)
Q Consensus 398 ~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~ 477 (734)
+.++.||++|+.. .||||+|||.+|+++++.
T Consensus 184 -------------------------------------~~~~~~s~~g~~~-----~~~di~APG~~i~s~~~~------- 214 (306)
T 4h6w_A 184 -------------------------------------GKPVDFSNWGDAY-----QKQGILAPGKDILGAKPN------- 214 (306)
T ss_dssp -------------------------------------SCBCSSSCBCHHH-----HHHEEEEECSSEEEECTT-------
T ss_pred -------------------------------------CCccccccccCCc-----CcceeecCCcCcccccCC-------
Confidence 2567889998653 588999999999999886
Q ss_pred CCCCCCcceEEeccccchhhHHHHHHHHHHh----hCCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccccCC
Q 044427 478 PEDTRSVSFNIISGTSMSCPHASGSAAYVKA----AHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAID 553 (734)
Q Consensus 478 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~ 553 (734)
+.|..++|||||||||||++|||++ ++|.|+|++||++|++||++++..+.. ....||+|+||+.+|++
T Consensus 215 ------~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~~-~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 215 ------GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKDTD-DQSRCLMGKLNILDAIE 287 (306)
T ss_dssp ------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTTCS-CGGGGTTCBCCHHHHHH
T ss_pred ------CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCCCC-CCCCcceeecCHHHHHH
Confidence 7899999999999999999999986 469999999999999999998765432 24579999999999987
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=8.7e-50 Score=428.04 Aligned_cols=268 Identities=26% Similarity=0.362 Sum_probs=221.8
Q ss_pred ccccccCccCCCCCC--CCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCC
Q 044427 81 FMGFSKGKLSSSQEG--SVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFH 158 (734)
Q Consensus 81 ~~g~~~~~~~~~~G~--GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~ 158 (734)
.++++..|..+ +|+ ||+|||||||||++||+|.+ ++...++|..+... ....
T Consensus 14 ~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~-----------------------~~~~~~~~~~~~~~--~~~~ 67 (320)
T 2z30_A 14 RVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA-----------------------NIAWCVSTLRGKVS--TKLR 67 (320)
T ss_dssp HTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGG-----------------------GEEEEEECGGGCCB--CCHH
T ss_pred hcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhc-----------------------ccccCccccCCccC--CCCC
Confidence 35666788776 999 99999999999999999963 24445555443210 0001
Q ss_pred CCCCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhC----------
Q 044427 159 SPRDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIAD---------- 227 (734)
Q Consensus 159 ~~~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~---------- 227 (734)
...|..||||||||||+|..+. .| +.||||+|+|+.+|+++..+ ++.+++++||+||+++
T Consensus 68 ~~~d~~gHGT~vAgiia~~~n~----~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~ 138 (320)
T 2z30_A 68 DCADQNGHGTHVIGTIAALNND----IG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGD 138 (320)
T ss_dssp HHBCSSSHHHHHHHHHHCCSSS----BS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCTTSS
T ss_pred CCCCCCCCHHHHHHHHHcccCC----Cc-----eEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCcccccccccc
Confidence 2357889999999999997321 12 38999999999999998776 6788999999999987
Q ss_pred ----------CCcEEEEccCCCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeE
Q 044427 228 ----------GVDIISVSLGSDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFV 297 (734)
Q Consensus 228 ----------g~dVINlSlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~ 297 (734)
+++|||||||... ....+..++.++.++|++||+||||+|.....++...|++|+|||++.+
T Consensus 139 ~~~~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---- 210 (320)
T 2z30_A 139 GIIAGDPDDDAAEVISMSLGGPA----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN---- 210 (320)
T ss_dssp SCCTTCTTSCCCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT----
T ss_pred cccccccccCCceEEEecCCCCC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCCC----
Confidence 9999999999873 2456777888899999999999999998766777788999999985422
Q ss_pred EEEEeCCCeEeeeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCc
Q 044427 298 AQAVLGNGITYPGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNG 377 (734)
Q Consensus 298 ~~~~~~~g~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga 377 (734)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEecCCccCcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcE
Q 044427 378 LGTIMADSVFTDLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDI 457 (734)
Q Consensus 378 ~g~i~~n~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI 457 (734)
+.++.||++|| +|
T Consensus 211 ---------------------------------------------------------~~~~~~S~~g~----------~v 223 (320)
T 2z30_A 211 ---------------------------------------------------------DNIASFSNRQP----------EV 223 (320)
T ss_dssp ---------------------------------------------------------SCBCTTSCSSC----------SE
T ss_pred ---------------------------------------------------------CCcCcccCCCC----------CE
Confidence 25788999987 78
Q ss_pred EecCCCEeeccCCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhC-------------CCCCHHHHHHHHHh
Q 044427 458 TAPGVDILASWSPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAH-------------PNWSPSSIKSALMT 524 (734)
Q Consensus 458 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-------------P~ls~~~vk~~L~~ 524 (734)
+|||.+|+++++. +.|..++|||||||||||++|||+|++ |.|++.+||++|++
T Consensus 224 ~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ 290 (320)
T 2z30_A 224 SAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHI 290 (320)
T ss_dssp EEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHH
T ss_pred EeCCCCeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHh
Confidence 9999999999876 789999999999999999999999998 99999999999999
Q ss_pred ccccccCCCcccCCCCCCCCccCccccCCC
Q 044427 525 TAYVMDSRKQEDLEFAYGSGHINPAQAIDP 554 (734)
Q Consensus 525 TA~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 554 (734)
||+++...+. +..||||+||+.+|++.
T Consensus 291 ta~~~~~~g~---~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 291 TADDLGPTGW---DADYGYGVVRAALAVQA 317 (320)
T ss_dssp HSBCCSSSSS---BTTTBTCBCCHHHHHHH
T ss_pred hCccCCCCCC---CCCcCCceeCHHHHHHH
Confidence 9999876553 78899999999999874
No 21
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=3.1e-48 Score=464.29 Aligned_cols=412 Identities=21% Similarity=0.202 Sum_probs=272.4
Q ss_pred CCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCCCCChHHHHHHhc
Q 044427 96 SVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDSEGHGTHTSSTAA 175 (734)
Q Consensus 96 GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~~gHGThVAGi~A 175 (734)
+|+|||||||+|.+|++.... ..|+...+...| .+.+.+..++.++.+ ......|++|||||||||||
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l------~~Y~~~~dyg~F--~D~v~~~~n~~Ddgd----~~~~v~D~~GHGThVAGIIA 281 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRI------GEYSRTHETRNV--DDFLSISVNVHDEGN----VLEVVGMSSPHGTHVSSIAS 281 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEE------ECTTTTCCCCEE--SSSCEEEEEEEGGGT----EEEEEECCCHHHHHHHHHHC
T ss_pred CEEEEEEeCCCCCCccccccc------cccccccccccc--ccccCCCCccCCCCC----ccccCCCCCCcHHHHHHHHh
Confidence 699999999998766654210 011110000111 112222223322211 00122478899999999999
Q ss_pred cCCCCCCccccccccceeeecCCCeEEEEEEecCCC---CCHHHHHHHHHHHHh-----CCCcEEEEccCCCCCCCCCCC
Q 044427 176 GREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG---CATADILAAFDDAIA-----DGVDIISVSLGSDFPFEYFED 247 (734)
Q Consensus 176 G~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g---~~~~~i~~ai~~ai~-----~g~dVINlSlG~~~~~~~~~~ 247 (734)
|.. ++ ..+.||||+|+|+.+|+++..+ .+..+++.+|.+|++ .|++|||||||... .....+
T Consensus 282 a~~-N~--------~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~-~~~~~~ 351 (1354)
T 3lxu_X 282 GNH-SS--------RDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHA-NWSNSG 351 (1354)
T ss_dssp CCC-SS--------SSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCC-SCSSCC
T ss_pred cCC-CC--------CCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCC-CCCccH
Confidence 986 21 1238999999999999987643 256778888888887 79999999999984 223356
Q ss_pred HHHHHHHHHH-hCCcEEEEcCCCCCCCCCCc--CCC--CCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCCCce
Q 044427 248 PIAIGSFHAM-KYGILTSNSAGNSGPDPYSV--SNF--APWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLNGIS 322 (734)
Q Consensus 248 ~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~~--~~~--ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 322 (734)
.+..++.++. ++|++||+||||+|....++ +.. ++++|+|||++...........
T Consensus 352 ~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~-------------------- 411 (1354)
T 3lxu_X 352 RIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM-------------------- 411 (1354)
T ss_dssp HHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC------------------------
T ss_pred HHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc--------------------
Confidence 7777787776 89999999999999865543 332 6999999997643211000000
Q ss_pred eeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceEEee
Q 044427 323 YPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPATLIS 402 (734)
Q Consensus 323 ~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~ 402 (734)
.
T Consensus 412 ---------------------~---------------------------------------------------------- 412 (1354)
T 3lxu_X 412 ---------------------R---------------------------------------------------------- 412 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------c----------------------------------------------------------
Confidence 0
Q ss_pred ccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCCCC
Q 044427 403 KENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPEDTR 482 (734)
Q Consensus 403 ~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~ 482 (734)
....+.++.||||||+. ++++||||+|||++|+++....
T Consensus 413 ----------------------------~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~----------- 451 (1354)
T 3lxu_X 413 ----------------------------EKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFT----------- 451 (1354)
T ss_dssp ---------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC---------------------
T ss_pred ----------------------------cCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCC-----------
Confidence 01124789999999998 8999999999999999975532
Q ss_pred CcceEEeccccchhhHHHHHHHHHHh----hCCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCccccCCCceec
Q 044427 483 SVSFNIISGTSMSCPHASGSAAYVKA----AHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPAQAIDPGLVY 558 (734)
Q Consensus 483 ~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~ 558 (734)
.+.|..++|||||||||||++|||++ .+|.|++.+||++|++||++++.. .++.||||+||+.+|++..+.+
T Consensus 452 ~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~~----~~~~~G~GlLDa~~AV~~a~~~ 527 (1354)
T 3lxu_X 452 MSKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGYV----DPFAQGHGLLNVEKAFEHLTEH 527 (1354)
T ss_dssp -----CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTTS----CTTTSSSSBCCHHHHHHHHHTT
T ss_pred CCceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCCC----CcccccCCEeCHHHHHHHHHhc
Confidence 26789999999999999999999986 899999999999999999998753 2678999999999999999999
Q ss_pred cCCchhhhhhhhccCCC-cceeEEeccCCCcccCCCCCCCCCCCCCCceeeeecCCCceEEEEEEEEEe---cCCC-Cee
Q 044427 559 DATEVDYVNFLCKQGYN-TTIIRQITGDNSSVCNSTEPGRAWDLNYPSFSLAIEDGQPIYGVFTRTVTN---VGSP-NST 633 (734)
Q Consensus 559 ~~~~~d~~~~l~~~~~~-~~~~~~~~~~~~~~c~~~~~~~~~~ln~psi~~~~~~~~~~~~~~~~tv~N---~~~~-~~t 633 (734)
+....+++.|+|..+.. ...|.+-.. . | +. ...++++++-++.| ..+. ...
T Consensus 528 ~~~p~~~v~f~~~v~~~~~rgIylR~~--~--~-------------~~-------~~~~tv~V~p~f~~~~~~~~~~~i~ 583 (1354)
T 3lxu_X 528 RQSKDNMLRFSVRVGNNADKGIHLRQG--V--Q-------------RN-------SIDYNVYIEPIFYNDKEADPKDKFN 583 (1354)
T ss_dssp TTCGGGGEEEEEEETTTTBSSEEECSS--C--C-------------CS-------CEEEEEEEEEEESSCSCSSSTTCSC
T ss_pred CCCCccceEEEEEecCCCCCceEEecc--c--c-------------CC-------ceEEEEEEeeeecCcccCChhhccc
Confidence 99999999999998753 222211110 0 0 00 01112223333322 1111 112
Q ss_pred EEEEe--eCCCceEEEEEcCeeEEeeCCcEEEEEEEEEccccCCCCceEEEEEEEc-----CceEEEeEEEEEecC
Q 044427 634 YTVRP--YMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKIAQQPIMSGAIVWED-----GVHQVRSPVVIYNIL 702 (734)
Q Consensus 634 y~~~v--~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~~~-----~~~~v~~P~~~~~~~ 702 (734)
|...+ .... -.|. .|+.|.+ .++.++|.|+|+++... .+.+++.|...| .....|+|+.|....
T Consensus 584 f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp~~L~-~G~h~~~v~~~D~~~~~~gp~f~ipvTv~~P~ 654 (1354)
T 3lxu_X 584 FNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDPTGLQ-PGVHSAVIRAYDTDCVQKGSLFEIPVTVVQPH 654 (1354)
T ss_dssp CCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECGGGCC-SEEEEEEEEEEESSCTTSCCSEEEEEEEEECB
T ss_pred eEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECCCCCC-CcceeEEEEEEEcCCcccCceEEeeEEEEeee
Confidence 22222 1111 2333 3777777 57789999999999875 578999999875 357899999999865
No 22
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.4e-49 Score=431.54 Aligned_cols=274 Identities=21% Similarity=0.169 Sum_probs=220.3
Q ss_pred ccccccCccCCCCCC--CCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCC
Q 044427 81 FMGFSKGKLSSSQEG--SVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFH 158 (734)
Q Consensus 81 ~~g~~~~~~~~~~G~--GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~ 158 (734)
.++++..|.. .+|+ ||+||||||||| +||+|.+ +++..++|..+.. +.+..
T Consensus 29 ~i~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~-----------------------~~~~~~~~~~~~~--~~~~~ 81 (347)
T 2iy9_A 29 AIGLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSD-----------------------SEFAKFSFTQDGS--PFPVK 81 (347)
T ss_dssp HHTCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTT-----------------------CEEEEEECBTTCC--SSCCS
T ss_pred hCChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhc-----------------------CcccCCcccCCCC--CCCCC
Confidence 3566667755 8999 999999999999 9999963 2455566664421 11122
Q ss_pred CCCCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHhC------CCcEE
Q 044427 159 SPRDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDGCATADILAAFDDAIAD------GVDII 232 (734)
Q Consensus 159 ~~~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g~~~~~i~~ai~~ai~~------g~dVI 232 (734)
.+.|..||||||||||+|+. | +.||||+|+|+.+|+++..+.. ++++||+||+++ +++||
T Consensus 82 ~~~d~~gHGT~vAgiia~~~-------g-----~~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~~~~~~Vi 147 (347)
T 2iy9_A 82 KSEALYIHGTAMASLIASRY-------G-----IYGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLAPGEEKII 147 (347)
T ss_dssp SSHHHHHHHHHHHHHHHCSS-------S-----SCCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSCTTEEEEE
T ss_pred CCCCCCCcHHHHHHHHhccc-------C-----CcccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcccCCceEE
Confidence 45678899999999999971 2 2899999999999998775543 899999999999 99999
Q ss_pred EEccCCCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCC-------CCcCCCCC----------ceEEeccccc--C
Q 044427 233 SVSLGSDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDP-------YSVSNFAP----------WTLTVAASSI--D 293 (734)
Q Consensus 233 NlSlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-------~~~~~~ap----------~vitVga~~~--~ 293 (734)
|||||... .......+..++.++.++|++||+||||+|... ..++...+ ++|+|||++. +
T Consensus 148 n~S~G~~~-~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~~ 226 (347)
T 2iy9_A 148 NISGGQKG-VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRK 226 (347)
T ss_dssp EESSCBCC-C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCCT
T ss_pred EeccccCC-CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCCC
Confidence 99999773 233556778888899999999999999999753 34555567 8899988654 1
Q ss_pred ceeEEEEEeCCCeEeeeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhh
Q 044427 294 RKFVAQAVLGNGITYPGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDIL 373 (734)
Q Consensus 294 ~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~ 373 (734)
... .
T Consensus 227 g~~-------------------------------------------------~--------------------------- 230 (347)
T 2iy9_A 227 GET-------------------------------------------------P--------------------------- 230 (347)
T ss_dssp TSC-------------------------------------------------C---------------------------
T ss_pred Cce-------------------------------------------------e---------------------------
Confidence 000 0
Q ss_pred ccCceEEEEecCCccCcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCC
Q 044427 374 AVNGLGTIMADSVFTDLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDIL 453 (734)
Q Consensus 374 ~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~ 453 (734)
...+.++.||++||+
T Consensus 231 ----------------------------------------------------------~~~~~~~~fS~~G~~------- 245 (347)
T 2iy9_A 231 ----------------------------------------------------------VLHGGGITGSRFGNN------- 245 (347)
T ss_dssp ----------------------------------------------------------CBCCCSSSCBCBCTT-------
T ss_pred ----------------------------------------------------------cccCCCCCCCCCCCC-------
Confidence 001245799999995
Q ss_pred CCcEEecCCCEeeccCCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCC
Q 044427 454 KPDITAPGVDILASWSPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRK 533 (734)
Q Consensus 454 KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~ 533 (734)
||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||+++...+
T Consensus 246 ~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~ 312 (347)
T 2iy9_A 246 WVDIAAPGQNITFLRPD-------------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLV 312 (347)
T ss_dssp TCSEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGGT
T ss_pred CCEEEeCCCCeEeecCC-------------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCCC
Confidence 68999999999999986 77999999999999999999999999999999999999999999987653
Q ss_pred cccCCCCCCCCccCccccCCC
Q 044427 534 QEDLEFAYGSGHINPAQAIDP 554 (734)
Q Consensus 534 ~~~~~~~~G~G~vn~~~Al~~ 554 (734)
+..+|+|+||+.+|++.
T Consensus 313 ----~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 313 ----DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp ----TTSGGGEECCHHHHHHH
T ss_pred ----CccccCCEecHHHHHHH
Confidence 46899999999999984
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.3e-48 Score=436.53 Aligned_cols=297 Identities=24% Similarity=0.293 Sum_probs=229.8
Q ss_pred ccccccccCcc-CCCCCCCCEEEEEccCCCC------CCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCc
Q 044427 79 WDFMGFSKGKL-SSSQEGSVIIGLLDTGIWP------ESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENI 151 (734)
Q Consensus 79 ~~~~g~~~~~~-~~~~G~GV~VgVIDtGid~------~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~ 151 (734)
.+.++++..|. .+++|+||+|||||||||+ +||+|.+ ++...++|.+.
T Consensus 5 ~~~i~~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~-----------------------~i~~~~~~~~~-- 59 (434)
T 1wmd_A 5 RGIVKADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG-----------------------KITALYALGRT-- 59 (434)
T ss_dssp HHHTTHHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT-----------------------CEEEEEETTTT--
T ss_pred hhhhCchhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC-----------------------CEeeeccccCC--
Confidence 34567777884 7999999999999999999 7999963 24555566543
Q ss_pred cccCCCCCCCCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCCC---CHHHHHHHHHHHHhCC
Q 044427 152 YEVTDFHSPRDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDGC---ATADILAAFDDAIADG 228 (734)
Q Consensus 152 ~~~~~~~~~~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g~---~~~~i~~ai~~ai~~g 228 (734)
..+.|..||||||||||+|+.. + +.||||+|+|+.+|+++..+. ...++.++|++|+++|
T Consensus 60 ------~~~~d~~gHGT~VAgiiag~g~------~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~g 122 (434)
T 1wmd_A 60 ------NNANDTNGHGTHVAGSVLGNGS------T-----NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAG 122 (434)
T ss_dssp ------TCCCCSSSHHHHHHHHHHCCSS------S-----SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTT
T ss_pred ------CCCCCCCCcHHHHHHHHHcCCC------C-----ceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhcC
Confidence 3567889999999999998642 1 389999999999999987663 4567899999999999
Q ss_pred CcEEEEccCCCCCCCCCCCHHHHHHHHH-HhCCcEEEEcCCCCCCCCC--CcCCCCCceEEecccccCceeEEEEEeCCC
Q 044427 229 VDIISVSLGSDFPFEYFEDPIAIGSFHA-MKYGILTSNSAGNSGPDPY--SVSNFAPWTLTVAASSIDRKFVAQAVLGNG 305 (734)
Q Consensus 229 ~dVINlSlG~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~~--~~~~~ap~vitVga~~~~~~~~~~~~~~~g 305 (734)
++|||||||..... ..+....++.++ .++|++||+||||+|.... ..+..++++|+|||++..+...
T Consensus 123 ~~Vin~S~G~~~~~--~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~-------- 192 (434)
T 1wmd_A 123 ARIHTNSWGAAVNG--AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF-------- 192 (434)
T ss_dssp CSEEEECCCBCCTT--CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG--------
T ss_pred CeEEEecCCCCcCC--cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc--------
Confidence 99999999987311 224455566555 5899999999999998654 3455679999999976432000
Q ss_pred eEeeeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecC
Q 044427 306 ITYPGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADS 385 (734)
Q Consensus 306 ~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~ 385 (734)
+. .
T Consensus 193 -----------------------~~---------------~--------------------------------------- 195 (434)
T 1wmd_A 193 -----------------------GS---------------Y--------------------------------------- 195 (434)
T ss_dssp -----------------------CG---------------G---------------------------------------
T ss_pred -----------------------Cc---------------c---------------------------------------
Confidence 00 0
Q ss_pred CccCcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEe
Q 044427 386 VFTDLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDIL 465 (734)
Q Consensus 386 ~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~ 465 (734)
....+.++.||++||+. ++++||||+|||++|+
T Consensus 196 ---------------------------------------------~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~ 228 (434)
T 1wmd_A 196 ---------------------------------------------ADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFIL 228 (434)
T ss_dssp ---------------------------------------------GSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEE
T ss_pred ---------------------------------------------cCCCCccccccCCCCCC--CCCCCceEEcCCCCeE
Confidence 01134789999999998 8999999999999999
Q ss_pred eccCCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCC-----CHHHHHHHHHhccccccCCCcccCCCC
Q 044427 466 ASWSPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNW-----SPSSIKSALMTTAYVMDSRKQEDLEFA 540 (734)
Q Consensus 466 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~l-----s~~~vk~~L~~TA~~~~~~~~~~~~~~ 540 (734)
++++........ .....+.|..++|||||||||||++|||+|++|++ ++++||++|++||+++...+ .+..
T Consensus 229 s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~~~---~~~~ 304 (434)
T 1wmd_A 229 SARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGLGY---PNGN 304 (434)
T ss_dssp EECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSSCS---SCTT
T ss_pred ecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCCCC---CCcc
Confidence 998642110000 00013679999999999999999999999998865 89999999999999864322 3789
Q ss_pred CCCCccCccccCCCc
Q 044427 541 YGSGHINPAQAIDPG 555 (734)
Q Consensus 541 ~G~G~vn~~~Al~~~ 555 (734)
||||+||+.+|++..
T Consensus 305 ~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 305 QGWGRVTLDKSLNVA 319 (434)
T ss_dssp TTTCBCCHHHHHTCE
T ss_pred CCcCeEeHHHhcccc
Confidence 999999999999754
No 24
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=7.2e-49 Score=425.05 Aligned_cols=299 Identities=25% Similarity=0.293 Sum_probs=222.1
Q ss_pred cccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCccccccc-CCcccCce----eEeeeecCCCC-ccccC
Q 044427 82 MGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTG-ANFTCNNK----IIGARYYNSEN-IYEVT 155 (734)
Q Consensus 82 ~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~-~~f~~n~k----i~g~~~~~~~~-~~~~~ 155 (734)
++++..|..+++|+||+||||||||| +||+|.+.-.. .|+-.... .....+.+ .-...++.... ...+.
T Consensus 19 i~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (340)
T 3lpc_A 19 VKADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRPD 93 (340)
T ss_dssp CCHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTSCTTC
T ss_pred CCHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCccccccccccccccCCCC
Confidence 55666888999999999999999998 99999743211 11110000 00000000 00000000000 00112
Q ss_pred CCCCCCCCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHh---------
Q 044427 156 DFHSPRDSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDGCATADILAAFDDAIA--------- 226 (734)
Q Consensus 156 ~~~~~~D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g~~~~~i~~ai~~ai~--------- 226 (734)
+.....|..||||||||||+|...++. | +.||||+|+|+.+|+++..+.+..+++++|+||++
T Consensus 94 ~~~~~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~~~~ 165 (340)
T 3lpc_A 94 PRKERSDSSWHGSHVAGTIAAVTNNRI---G-----VAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPEN 165 (340)
T ss_dssp GGGSCBCCCCHHHHHHHHHHCCCSSSS---S-----CCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTSCCC
T ss_pred cccCCCCCCCCHHHHHHHHHccCCCCC---c-----ceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhcccccccccc
Confidence 223457889999999999999864421 2 38999999999999998887889999999999998
Q ss_pred -CCCcEEEEccCCCCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCC-CcCCCCCceEEecccccCceeEEEEEeCC
Q 044427 227 -DGVDIISVSLGSDFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPY-SVSNFAPWTLTVAASSIDRKFVAQAVLGN 304 (734)
Q Consensus 227 -~g~dVINlSlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVga~~~~~~~~~~~~~~~ 304 (734)
.+++|||||||... .....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 166 ~~~~~Vin~S~G~~~---~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------- 231 (340)
T 3lpc_A 166 RNPAKVINMSLGSDG---QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR----------- 231 (340)
T ss_dssp SSCCSEEEECCCEES---CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT-----------
T ss_pred cCCCeEEEeCcCCCC---CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC-----------
Confidence 89999999999762 33456777888899999999999999987643 345667889999885422
Q ss_pred CeEeeeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEec
Q 044427 305 GITYPGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMAD 384 (734)
Q Consensus 305 g~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n 384 (734)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccCcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCE
Q 044427 385 SVFTDLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDI 464 (734)
Q Consensus 385 ~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I 464 (734)
+.++.||++|| ||||+|||.+|
T Consensus 232 --------------------------------------------------~~~~~~S~~g~--------~~di~ApG~~i 253 (340)
T 3lpc_A 232 --------------------------------------------------GIRASFSNYGV--------DVDLAAPGQDI 253 (340)
T ss_dssp --------------------------------------------------SSBCTTCCBST--------TCCEEEECSSE
T ss_pred --------------------------------------------------CCcCCCCCCCC--------CceEEecCCCe
Confidence 36788999997 46999999999
Q ss_pred eeccCCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhh-C---CCCCHHHHHHHHHhccccccCCCcccCCCC
Q 044427 465 LASWSPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAA-H---PNWSPSSIKSALMTTAYVMDSRKQEDLEFA 540 (734)
Q Consensus 465 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~ 540 (734)
+++++.... ......|..++|||||||+|||++|||+|+ + |.|++++||++|++||+++... .+..
T Consensus 254 ~s~~~~~~~------~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~~----~~~~ 323 (340)
T 3lpc_A 254 LSTVDSGTR------RPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNGR----LDRA 323 (340)
T ss_dssp EEEEESCSS------SCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSSC----CSSC
T ss_pred ecccCCCCc------CCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCCC----CCCC
Confidence 999875321 111256999999999999999999999998 5 9999999999999999987532 2679
Q ss_pred CCCCccCccccCCCc
Q 044427 541 YGSGHINPAQAIDPG 555 (734)
Q Consensus 541 ~G~G~vn~~~Al~~~ 555 (734)
+|||+||+.+||+..
T Consensus 324 ~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 324 LGSGIVDAEAAVNSV 338 (340)
T ss_dssp CCSSBCCHHHHHHHH
T ss_pred cccceecHHHHHHHH
Confidence 999999999998753
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=5e-47 Score=399.10 Aligned_cols=238 Identities=24% Similarity=0.354 Sum_probs=203.1
Q ss_pred cccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCC
Q 044427 84 FSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDS 163 (734)
Q Consensus 84 ~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~ 163 (734)
+...|..+++|+||+|+|||||||++||+|.+. +...++|.+.. ..+.|.
T Consensus 18 ~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~~~-------~~~~d~ 67 (284)
T 1sh7_A 18 LDRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR-----------------------SVSGYDFVDND-------ADSSDC 67 (284)
T ss_dssp CCSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC-----------------------EEEEEETTTTB-------SCCCCS
T ss_pred chhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC-----------------------ccccccccCCC-------CCCCCC
Confidence 344677799999999999999999999999632 44556666542 346788
Q ss_pred CCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhC--CCcEEEEccCCCC
Q 044427 164 EGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIAD--GVDIISVSLGSDF 240 (734)
Q Consensus 164 ~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~--g~dVINlSlG~~~ 240 (734)
.||||||||||+|+. .||||+|+|+.+|+++..+ .+.+++++||+|++++ +++|||||||..
T Consensus 68 ~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~- 132 (284)
T 1sh7_A 68 NGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLGGG- 132 (284)
T ss_dssp SSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCCBS-
T ss_pred CCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCC-
Confidence 999999999999873 6999999999999998766 6788999999999984 799999999987
Q ss_pred CCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCC-CcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCC
Q 044427 241 PFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPY-SVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLN 319 (734)
Q Consensus 241 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~ 319 (734)
....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 133 ----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------------------------- 182 (284)
T 1sh7_A 133 ----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS-------------------------- 182 (284)
T ss_dssp ----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT--------------------------
T ss_pred ----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC--------------------------
Confidence 2357788888899999999999999997542 445667899999885422
Q ss_pred CceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceE
Q 044427 320 GISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPAT 399 (734)
Q Consensus 320 ~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~ 399 (734)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCC
Q 044427 400 LISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPE 479 (734)
Q Consensus 400 ~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~ 479 (734)
+.++.||++||.. ||+|||++|+++++.
T Consensus 183 -----------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~--------- 210 (284)
T 1sh7_A 183 -----------------------------------DSRSSFSNWGSCV--------DLFAPGSQIKSAWYD--------- 210 (284)
T ss_dssp -----------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTT---------
T ss_pred -----------------------------------CCcCcccCCCCcc--------EEEeccCCeEEecCC---------
Confidence 3678899999965 999999999999876
Q ss_pred CCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCC
Q 044427 480 DTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSR 532 (734)
Q Consensus 480 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~ 532 (734)
+.|..++|||||||||||++|||+|++|+|++++||++|++||++....
T Consensus 211 ----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 259 (284)
T 1sh7_A 211 ----GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKVS 259 (284)
T ss_dssp ----SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCB
T ss_pred ----CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCcc
Confidence 6899999999999999999999999999999999999999999886543
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=3.3e-46 Score=392.14 Aligned_cols=238 Identities=26% Similarity=0.350 Sum_probs=201.1
Q ss_pred ccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCCC
Q 044427 85 SKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDSE 164 (734)
Q Consensus 85 ~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~~ 164 (734)
...|..+++|+||+|+|||||||++||+|.+. +..+++|.++. ..+.|..
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~-----------------------~~~~~d~~~~~-------~~~~d~~ 70 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR-----------------------ASSGYDFIDND-------YDATDCN 70 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC-----------------------EEEEEETTTTB-------SCCCCSS
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc-----------------------cccCeecCCCC-------CCCCCCC
Confidence 34677899999999999999999999999632 44556666542 3467889
Q ss_pred CChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHh--CCCcEEEEccCCCCC
Q 044427 165 GHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIA--DGVDIISVSLGSDFP 241 (734)
Q Consensus 165 gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~--~g~dVINlSlG~~~~ 241 (734)
||||||||||+|.. .||||+|+|+.+|++++.+ ++.+++++||+|+++ .+++|||||||...
T Consensus 71 gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~- 135 (278)
T 2b6n_A 71 GHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLGGGA- 135 (278)
T ss_dssp SHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC-
T ss_pred CcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCCCCc-
Confidence 99999999999863 6999999999999998766 678899999999998 59999999999872
Q ss_pred CCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCC-CcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCCC
Q 044427 242 FEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPY-SVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLNG 320 (734)
Q Consensus 242 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 320 (734)
...+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 136 ----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------------------------- 184 (278)
T 2b6n_A 136 ----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN--------------------------- 184 (278)
T ss_dssp ----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------------------------
T ss_pred ----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC---------------------------
Confidence 356778888899999999999999997643 245567889999885422
Q ss_pred ceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceEE
Q 044427 321 ISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPATL 400 (734)
Q Consensus 321 ~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~ 400 (734)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCC
Q 044427 401 ISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPED 480 (734)
Q Consensus 401 i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 480 (734)
+.++.||++||. |||+|||++|++++...
T Consensus 185 ----------------------------------~~~~~~S~~G~~--------~di~ApG~~i~s~~~~~--------- 213 (278)
T 2b6n_A 185 ----------------------------------DSRSSFSNYGTC--------LDIYAPGSSITSSWYTS--------- 213 (278)
T ss_dssp ----------------------------------SBBCTTCCBSTT--------CCEEEECSSEEEECTTS---------
T ss_pred ----------------------------------CCcCCcCCCCCC--------CeEEeCCCCeECcccCC---------
Confidence 357889999985 49999999999998652
Q ss_pred CCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccC
Q 044427 481 TRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDS 531 (734)
Q Consensus 481 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~ 531 (734)
.+.|..++|||||||||||++|||+|++|+|++.+||++|++||++...
T Consensus 214 --~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 262 (278)
T 2b6n_A 214 --NSATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADKV 262 (278)
T ss_dssp --TTCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred --CCCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCc
Confidence 2679999999999999999999999999999999999999999987543
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=6.5e-46 Score=389.90 Aligned_cols=240 Identities=24% Similarity=0.337 Sum_probs=203.4
Q ss_pred cccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCC
Q 044427 82 MGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPR 161 (734)
Q Consensus 82 ~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~ 161 (734)
+.+...|..+.+|+||+|+|||||||++||+|.+. +...++|.. ..+.
T Consensus 18 ~~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~---------~~~~ 65 (276)
T 4dzt_A 18 LPLSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR-----------------------ARVGYDALG---------GNGQ 65 (276)
T ss_dssp SSCCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC-----------------------EEEEEETTS---------SCSC
T ss_pred CCcccceecCCCCCCcEEEEEccCCCCCChhHccC-----------------------eeccccCCC---------CCCC
Confidence 34445777799999999999999999999999632 444455544 2456
Q ss_pred CCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhC--CCcEEEEccCC
Q 044427 162 DSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIAD--GVDIISVSLGS 238 (734)
Q Consensus 162 D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~--g~dVINlSlG~ 238 (734)
|..||||||||||+|.. .||||+|+|+.+|++++.+ .+..+++++|+|+++. +++|||||||.
T Consensus 66 d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~ 131 (276)
T 4dzt_A 66 DCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGG 131 (276)
T ss_dssp CSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCE
T ss_pred CCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCCC
Confidence 78899999999999873 7999999999999998776 7888999999999997 89999999997
Q ss_pred CCCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCC-cCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCC
Q 044427 239 DFPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYS-VSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFD 317 (734)
Q Consensus 239 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 317 (734)
.. ...+..++.++.++|+++|+||||+|..... .+...+++|+|||.+.+
T Consensus 132 ~~-----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------ 182 (276)
T 4dzt_A 132 GV-----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS------------------------ 182 (276)
T ss_dssp EC-----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT------------------------
T ss_pred CC-----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC------------------------
Confidence 62 4677888889999999999999999976543 25567888999875422
Q ss_pred CCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcc
Q 044427 318 LNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLP 397 (734)
Q Consensus 318 ~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p 397 (734)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCC
Q 044427 398 ATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLD 477 (734)
Q Consensus 398 ~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~ 477 (734)
+.++.||++||.. ||+|||++|++++...
T Consensus 183 -------------------------------------~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~------ 211 (276)
T 4dzt_A 183 -------------------------------------DARASFSNYGSCV--------DLFAPGASIPSAWYTS------ 211 (276)
T ss_dssp -------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTS------
T ss_pred -------------------------------------CCcCCcCCCCCCc--------eEEeCCCCeEccccCC------
Confidence 3678899999976 9999999999998763
Q ss_pred CCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCC
Q 044427 478 PEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSR 532 (734)
Q Consensus 478 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~ 532 (734)
...|..++|||||||+|||++|||+|++|+|++++||++|++||++....
T Consensus 212 -----~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 261 (276)
T 4dzt_A 212 -----DTATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRLS 261 (276)
T ss_dssp -----SSCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCB
T ss_pred -----CCceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCccC
Confidence 25799999999999999999999999999999999999999999987654
No 28
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=2.3e-46 Score=434.00 Aligned_cols=292 Identities=20% Similarity=0.191 Sum_probs=202.1
Q ss_pred cccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCC
Q 044427 82 MGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPR 161 (734)
Q Consensus 82 ~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~ 161 (734)
+++..+|..+++|+||+|||||||||++||+|.+.- ..+.++|..+.. ...|.
T Consensus 57 in~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~----------------------~~~~~~~~~~~~-----d~~p~ 109 (600)
T 2oxa_A 57 LNLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV----------------------RPGSKNVVTGSD-----DPTPT 109 (600)
T ss_dssp CCCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB----------------------CSCCBCTTTCSS-----CCCCC
T ss_pred cChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc----------------------ccCceeccCCCC-----CCCCC
Confidence 444557788999999999999999999999997431 112334444321 12344
Q ss_pred C-CCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCCCCH--HHHHHHHHHHHhCCCcEEEEccCC
Q 044427 162 D-SEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDGCAT--ADILAAFDDAIADGVDIISVSLGS 238 (734)
Q Consensus 162 D-~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g~~~--~~i~~ai~~ai~~g~dVINlSlG~ 238 (734)
| ..||||||||||||. .++ .| +.||||+|+|+.+|+++..+... ..++++...+..++++|||||||.
T Consensus 110 d~~~gHGT~vAGiiaa~-~n~---~g-----~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~G~ 180 (600)
T 2oxa_A 110 DPDTGHGTSVSGIIAAV-DNA---IG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSYRM 180 (600)
T ss_dssp STTCCHHHHHHHHHHCC-SSS---SS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECCCC
T ss_pred CCCCCCccHHHHHhhcc-cCC---Cc-----ceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEeccC
Confidence 4 789999999999998 321 12 38999999999999998766432 344444445778899999999998
Q ss_pred CCCCCCCCCHHHH----HHHH---HHhCCcEEEEcCCCCCCCCCC----------------------cCCCCCceEEecc
Q 044427 239 DFPFEYFEDPIAI----GSFH---AMKYGILTSNSAGNSGPDPYS----------------------VSNFAPWTLTVAA 289 (734)
Q Consensus 239 ~~~~~~~~~~~~~----a~~~---a~~~Gi~vV~AAGN~G~~~~~----------------------~~~~ap~vitVga 289 (734)
........+.+.. ++.. +.++|++||+||||+|..... ..+.++|+|+|||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItVgA 260 (600)
T 2oxa_A 181 SVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSA 260 (600)
T ss_dssp CCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEEEE
T ss_pred CCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEEec
Confidence 7432333332222 2222 346899999999999864210 0011222333332
Q ss_pred cccCceeEEEEEeCCCeEeeeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcc
Q 044427 290 SSIDRKFVAQAVLGNGITYPGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDG 369 (734)
Q Consensus 290 ~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~ 369 (734)
+
T Consensus 261 ~------------------------------------------------------------------------------- 261 (600)
T 2oxa_A 261 L------------------------------------------------------------------------------- 261 (600)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 2
Q ss_pred hhhhccCceEEEEecCCccCcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCC
Q 044427 370 SDILAVNGLGTIMADSVFTDLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPIT 449 (734)
Q Consensus 370 ~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~ 449 (734)
...+.++.||++||+.
T Consensus 262 --------------------------------------------------------------~~~g~~a~fS~~G~~v-- 277 (600)
T 2oxa_A 262 --------------------------------------------------------------NADGVRSSYSSVGSNI-- 277 (600)
T ss_dssp --------------------------------------------------------------CTTSSBCTTCCBCTTE--
T ss_pred --------------------------------------------------------------cCCCCcCCcCCCCCCe--
Confidence 2235789999999987
Q ss_pred CCCCCCcEEecCCCEeeccCC-------CCC--CC------------CCCCCCCCcceEEeccccchhhHHHHHHHHHHh
Q 044427 450 VDILKPDITAPGVDILASWSP-------VAP--PS------------LDPEDTRSVSFNIISGTSMSCPHASGSAAYVKA 508 (734)
Q Consensus 450 ~~~~KPDI~APG~~I~sa~~~-------~~~--~~------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q 508 (734)
||+|||++|.+..+. ... .. ....+...+.|..++|||||||||||++|||+|
T Consensus 278 ------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl~s 351 (600)
T 2oxa_A 278 ------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMS 351 (600)
T ss_dssp ------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHH
T ss_pred ------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHHHH
Confidence 999999997554432 000 00 000111224589999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHhccccccCCCcc----------------------------cCCCCCCCCccCccccCCCceec
Q 044427 509 AHPNWSPSSIKSALMTTAYVMDSRKQE----------------------------DLEFAYGSGHINPAQAIDPGLVY 558 (734)
Q Consensus 509 ~~P~ls~~~vk~~L~~TA~~~~~~~~~----------------------------~~~~~~G~G~vn~~~Al~~~lv~ 558 (734)
++|+|++++||++|++||++++..+.+ ..+..||||+||+.+|++.+..+
T Consensus 352 ~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A~~~ 429 (600)
T 2oxa_A 352 AYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANH 429 (600)
T ss_dssp HSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTC
T ss_pred hCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHHHhc
Confidence 999999999999999999997654311 02578999999999999865443
No 29
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=3.9e-46 Score=391.26 Aligned_cols=238 Identities=29% Similarity=0.362 Sum_probs=202.6
Q ss_pred CCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCCCCChHH
Q 044427 90 SSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDSEGHGTH 169 (734)
Q Consensus 90 ~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~~gHGTh 169 (734)
...+|+||+|+|||||||++||+|.+. +...++|.+ .+.|..|||||
T Consensus 26 ~~~~G~gv~VaViDsGvd~~H~~l~~~-----------------------~~~~~~~~~----------~~~d~~gHGT~ 72 (279)
T 2pwa_A 26 DESAGQGSCVYVIDTGIEASHPEFEGR-----------------------AQMVKTYYY----------SSRDGNGHGTH 72 (279)
T ss_dssp CTTTTTTEEEEEEESCCCTTCGGGTTC-----------------------EEEEEESSS----------CSSCSSSHHHH
T ss_pred cCCCCCCCEEEEEeCCCCCCChhHhCc-----------------------cccccCCCC----------CCCCCCCCHHH
Confidence 357999999999999999999999632 444555551 35678999999
Q ss_pred HHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhCCC-------cEEEEccCCCCC
Q 044427 170 TSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIADGV-------DIISVSLGSDFP 241 (734)
Q Consensus 170 VAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~g~-------dVINlSlG~~~~ 241 (734)
|||||+|+. .||||+|+|+.+|+++..+ ++.+++++||+|++++++ +|||||||..
T Consensus 73 vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~-- 136 (279)
T 2pwa_A 73 CAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGG-- 136 (279)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE--
T ss_pred HHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCC--
Confidence 999999863 7999999999999998876 788999999999999887 9999999976
Q ss_pred CCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCC-CcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCCC
Q 044427 242 FEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPY-SVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLNG 320 (734)
Q Consensus 242 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 320 (734)
....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 137 ---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------------------------- 186 (279)
T 2pwa_A 137 ---YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY--------------------------- 186 (279)
T ss_dssp ---CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------------------------
T ss_pred ---CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC---------------------------
Confidence 2467788888899999999999999997643 345667899999885422
Q ss_pred ceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceEE
Q 044427 321 ISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPATL 400 (734)
Q Consensus 321 ~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~ 400 (734)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCC
Q 044427 401 ISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPED 480 (734)
Q Consensus 401 i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 480 (734)
+.++.||++||.+ ||+|||++|+++++.
T Consensus 187 ----------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~---------- 214 (279)
T 2pwa_A 187 ----------------------------------DRRSSFSNYGSVL--------DIFGPGTDILSTWIG---------- 214 (279)
T ss_dssp ----------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEETT----------
T ss_pred ----------------------------------CCcCCcCCCCCcc--------eEEEecCCeEEeecC----------
Confidence 3678899999964 999999999999886
Q ss_pred CCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCcccCCCCCCCCccCcc
Q 044427 481 TRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQEDLEFAYGSGHINPA 549 (734)
Q Consensus 481 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~~~~~~~~G~G~vn~~ 549 (734)
+.|..++|||||||||||++|||+|+ |.+++.+||++|++||++... ..+|+|.+|+.
T Consensus 215 ---~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~-------~~~~~g~~n~l 272 (279)
T 2pwa_A 215 ---GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL-------SNIPFGTVNLL 272 (279)
T ss_dssp ---TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC-------BSCCTTSCCEE
T ss_pred ---CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc-------CCCCCCCccEe
Confidence 67999999999999999999999999 999999999999999988643 24678888864
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.8e-45 Score=414.49 Aligned_cols=287 Identities=16% Similarity=0.134 Sum_probs=215.4
Q ss_pred cccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCC
Q 044427 82 MGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPR 161 (734)
Q Consensus 82 ~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~ 161 (734)
++++.+|..+++|+||+|||||||||++||+|.+.-. ....++|.++.. .+.+...+.
T Consensus 25 i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~---------------------~~~~~d~~~~~~-~p~~~~~~~ 82 (471)
T 1p8j_A 25 LNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD---------------------PGASFDVNDQDP-DPQPRYTQM 82 (471)
T ss_dssp CCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC---------------------GGGCEETTTTBS-CCCCCCCTT
T ss_pred CChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC---------------------ccCcccccCCCC-CCCCccCCC
Confidence 5666688889999999999999999999999974310 001334544321 111122456
Q ss_pred CCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHh-CCCcEEEEccCCCC
Q 044427 162 DSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDGCATADILAAFDDAIA-DGVDIISVSLGSDF 240 (734)
Q Consensus 162 D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g~~~~~i~~ai~~ai~-~g~dVINlSlG~~~ 240 (734)
|..+|||||||||||...++. | +.||||+|+|+.+|+++ +...++++||+++++ ++++|||||||...
T Consensus 83 d~~gHGT~vAGiiaa~~~n~~---g-----~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vin~S~G~~~ 151 (471)
T 1p8j_A 83 NDNRHGTRCAGEVAAVANNGV---C-----GVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIYSASWGPED 151 (471)
T ss_dssp CTTCHHHHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEEEECCBSCC
T ss_pred CCCCcHHHHHHHHHeeccCCC---C-----CEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEEEeccCcCC
Confidence 889999999999999754321 1 38999999999999985 346789999999999 99999999999863
Q ss_pred CCCC---CCCHHHHHHHHHH-----hCCcEEEEcCCCCCCCCCC----cCCCCCceEEecccccCceeEEEEEeCCCeEe
Q 044427 241 PFEY---FEDPIAIGSFHAM-----KYGILTSNSAGNSGPDPYS----VSNFAPWTLTVAASSIDRKFVAQAVLGNGITY 308 (734)
Q Consensus 241 ~~~~---~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~----~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~ 308 (734)
.... ....+..++.++. .+|++||+||||+|..... ....++++|+|||++.+
T Consensus 152 ~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~--------------- 216 (471)
T 1p8j_A 152 DGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF--------------- 216 (471)
T ss_dssp SSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT---------------
T ss_pred CCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC---------------
Confidence 2111 1233445555554 3699999999999975322 12235788999885422
Q ss_pred eeeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCcc
Q 044427 309 PGLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFT 388 (734)
Q Consensus 309 ~g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 388 (734)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeecc
Q 044427 389 DLAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASW 468 (734)
Q Consensus 389 ~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~ 468 (734)
+.++.||++||.. ....+|...+||.+|+++.
T Consensus 217 ----------------------------------------------g~~a~~S~~g~~~--~~~~~~~~~~~g~~i~st~ 248 (471)
T 1p8j_A 217 ----------------------------------------------GNVPWYSEACSST--LATTYSSGNQNEKQIVTTD 248 (471)
T ss_dssp ----------------------------------------------SCCCTTCCBCTTC--CEEEECCCSTTSCCEEEEE
T ss_pred ----------------------------------------------CCcccccCCCCcc--eEEeCCCCCCCCCCEEEee
Confidence 3678899999986 4444555556677999987
Q ss_pred CCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCCcc--------cCCCC
Q 044427 469 SPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSRKQE--------DLEFA 540 (734)
Q Consensus 469 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~~~~--------~~~~~ 540 (734)
.. ...|..++|||||||||||++|||+|++|+|++++||++|++||++++..... ..+..
T Consensus 249 ~~------------~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~~~~ 316 (471)
T 1p8j_A 249 LR------------QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHS 316 (471)
T ss_dssp TT------------TEEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEEBTT
T ss_pred CC------------CCccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCcccCCC
Confidence 64 26799999999999999999999999999999999999999999987653210 12578
Q ss_pred CCCCccCccccCCCce
Q 044427 541 YGSGHINPAQAIDPGL 556 (734)
Q Consensus 541 ~G~G~vn~~~Al~~~l 556 (734)
||||+||+.+|++...
T Consensus 317 ~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 317 YGYGLLDAGAMVALAQ 332 (471)
T ss_dssp TBTCBCCHHHHHHHHH
T ss_pred CCCEEEcHhHHHHHhh
Confidence 9999999999998543
No 31
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=1.1e-44 Score=381.22 Aligned_cols=227 Identities=27% Similarity=0.368 Sum_probs=193.9
Q ss_pred CCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCCCCChHHH
Q 044427 91 SSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDSEGHGTHT 170 (734)
Q Consensus 91 ~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~~gHGThV 170 (734)
..+|+||+|+|||||||++||+|.+. +...++|..+ ..|..||||||
T Consensus 28 ~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~~----------~~d~~gHGT~v 74 (279)
T 3f7m_A 28 TSAGAGACVYVIDTGVEDTHPDFEGR-----------------------AKQIKSYAST----------ARDGHGHGTHC 74 (279)
T ss_dssp TTTTTTEEEEEEESCCCTTCGGGTTC-----------------------EEEEEECSSS----------SSCSSSHHHHH
T ss_pred CCCCCCCEEEEEcCCCCCCChhhccc-----------------------cccccCCCCC----------CCCCCCcHHHH
Confidence 34999999999999999999999632 4445555433 23788999999
Q ss_pred HHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhCC-------CcEEEEccCCCCCC
Q 044427 171 SSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIADG-------VDIISVSLGSDFPF 242 (734)
Q Consensus 171 AGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~g-------~dVINlSlG~~~~~ 242 (734)
||||+|+. .||||+|+|+.+|+++..+ ++..+++++|+|+++++ ++|||||||..
T Consensus 75 Agii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~--- 137 (279)
T 3f7m_A 75 AGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGG--- 137 (279)
T ss_dssp HHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE---
T ss_pred HHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcC---
Confidence 99999863 7999999999999998766 78889999999999976 89999999976
Q ss_pred CCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCCC-cCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCCCCc
Q 044427 243 EYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPYS-VSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDLNGI 321 (734)
Q Consensus 243 ~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 321 (734)
....+..++.++.++|++||+||||+|..... .+...+++|+|||++.+
T Consensus 138 --~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------------------------- 187 (279)
T 3f7m_A 138 --YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN---------------------------- 187 (279)
T ss_dssp --CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----------------------------
T ss_pred --ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC----------------------------
Confidence 44678888889999999999999999876443 35567889999885422
Q ss_pred eeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcceEEe
Q 044427 322 SYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPATLI 401 (734)
Q Consensus 322 ~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i 401 (734)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCCCCCCCCC
Q 044427 402 SKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSPVAPPSLDPEDT 481 (734)
Q Consensus 402 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~ 481 (734)
+.++.||++||.. ||+|||++|+++++.
T Consensus 188 ---------------------------------~~~~~~S~~g~~~--------di~ApG~~i~s~~~~----------- 215 (279)
T 3f7m_A 188 ---------------------------------DVRSTFSNYGRVV--------DIFAPGTSITSTWIG----------- 215 (279)
T ss_dssp ---------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECGG-----------
T ss_pred ---------------------------------CCCCCCCCCCCCC--------eEEECCCCeEeecCC-----------
Confidence 3678899999965 999999999999876
Q ss_pred CCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCC
Q 044427 482 RSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSR 532 (734)
Q Consensus 482 ~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~ 532 (734)
+.|..++|||||||+|||++|||+|++|. ++++||++|++||++....
T Consensus 216 --~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~~ 263 (279)
T 3f7m_A 216 --GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVLT 263 (279)
T ss_dssp --GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCCB
T ss_pred --CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccccc
Confidence 77999999999999999999999999999 9999999999999885443
No 32
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=1.1e-44 Score=411.03 Aligned_cols=279 Identities=19% Similarity=0.165 Sum_probs=214.4
Q ss_pred cccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCC
Q 044427 82 MGFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPR 161 (734)
Q Consensus 82 ~g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~ 161 (734)
+++..+|..+++|+||+|||||||||++||+|.+.-. ..+.++|.++.. +.....
T Consensus 41 i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~---------------------~~~~~d~~~~~~----~~~p~~ 95 (503)
T 2id4_A 41 INVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFC---------------------AEGSWDFNDNTN----LPKPRL 95 (503)
T ss_dssp CCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBC---------------------GGGCEETTTTBS----CCCCCS
T ss_pred cChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhccc---------------------ccCcccCCCCCC----CCCCCC
Confidence 4555678889999999999999999999999975311 012345554321 112235
Q ss_pred CCCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHhCCCcEEEEccCCCCC
Q 044427 162 DSEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDGCATADILAAFDDAIADGVDIISVSLGSDFP 241 (734)
Q Consensus 162 D~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g~~~~~i~~ai~~ai~~g~dVINlSlG~~~~ 241 (734)
|..||||||||||||...++. | +.||||+|+|+.+|+++.. .+..++++||+|+++++ +|||||||....
T Consensus 96 d~~gHGT~vAGiiaa~~~n~~---~-----~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S~G~~~~ 165 (503)
T 2id4_A 96 SDDYHGTRCAGEIAAKKGNNF---C-----GVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCSWGPADD 165 (503)
T ss_dssp TTTTHHHHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEECEESCCS
T ss_pred CCCChHHHHHHHHHhccCCCC---C-----cEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeCCCcCCC
Confidence 788999999999999764321 2 2899999999999998743 67888999999999988 999999998732
Q ss_pred CCC---CCCHHHHHHHHHH-----hCCcEEEEcCCCCCCCCC--CcCC--CCCceEEecccccCceeEEEEEeCCCeEee
Q 044427 242 FEY---FEDPIAIGSFHAM-----KYGILTSNSAGNSGPDPY--SVSN--FAPWTLTVAASSIDRKFVAQAVLGNGITYP 309 (734)
Q Consensus 242 ~~~---~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~--~~~~--~ap~vitVga~~~~~~~~~~~~~~~g~~~~ 309 (734)
... ....+..++.++. .+|++||+||||+|.... ..+. .++++|+|||++.+
T Consensus 166 ~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~---------------- 229 (503)
T 2id4_A 166 GRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK---------------- 229 (503)
T ss_dssp SSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT----------------
T ss_pred CccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC----------------
Confidence 211 2234566666665 479999999999996542 2222 35678888875422
Q ss_pred eeecccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccC
Q 044427 310 GLSINSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTD 389 (734)
Q Consensus 310 g~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~ 389 (734)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEe----cCCCEe
Q 044427 390 LAFSYPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITA----PGVDIL 465 (734)
Q Consensus 390 ~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~A----PG~~I~ 465 (734)
+.++.||++||.. |++| ||..|+
T Consensus 230 ---------------------------------------------~~~a~~S~~g~~~--------~~~a~~~gpG~~I~ 256 (503)
T 2id4_A 230 ---------------------------------------------DLHPPYSEGCSAV--------MAVTYSSGSGEYIH 256 (503)
T ss_dssp ---------------------------------------------SCCCTTCCCCTTE--------EEEEECSBTTBCEE
T ss_pred ---------------------------------------------CCcCCcCCCCCcc--------eEeecCCCCCCceE
Confidence 3578899999987 8887 899999
Q ss_pred eccCCCCCCCCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCC-Cc--------cc
Q 044427 466 ASWSPVAPPSLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSR-KQ--------ED 536 (734)
Q Consensus 466 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~-~~--------~~ 536 (734)
++... ...|..++|||||||||||++|||+|++|+|++.+||++|++||+++... .. ..
T Consensus 257 st~~~------------~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~ 324 (503)
T 2id4_A 257 SSDIN------------GRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKK 324 (503)
T ss_dssp EECST------------TCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSE
T ss_pred eecCC------------CCceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCc
Confidence 99543 27799999999999999999999999999999999999999999987654 10 01
Q ss_pred CCCCCCCCccCccccCCCce
Q 044427 537 LEFAYGSGHINPAQAIDPGL 556 (734)
Q Consensus 537 ~~~~~G~G~vn~~~Al~~~l 556 (734)
.+..||||+||+.+|++...
T Consensus 325 ~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 325 YSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp EBTTTBTCBCCHHHHHHHHT
T ss_pred cCcccCCcEecHHHHHHHHh
Confidence 25789999999999998543
No 33
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=3.4e-44 Score=400.74 Aligned_cols=241 Identities=22% Similarity=0.258 Sum_probs=188.3
Q ss_pred CccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCCCCCC
Q 044427 87 GKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRDSEGH 166 (734)
Q Consensus 87 ~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D~~gH 166 (734)
.|..+++|+||+|+|||||||++||+|.+. .....+++..+.+... ....+.|..||
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr----------------------~~~~~~~~v~~~dg~~-f~~~~~D~~GH 74 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGR----------------------VMVTDFENVPEEDGTR-FHRQASKCDSH 74 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTT----------------------EEEEEEECCCCCC--------CTTTTHH
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHccc----------------------ccccCcccccCCCCcc-ccCCCCCCCCh
Confidence 566788999999999999999999999743 1111112211100000 01245678999
Q ss_pred hHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHhC------CCcEEEEccCCC
Q 044427 167 GTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAFDDAIAD------GVDIISVSLGSD 239 (734)
Q Consensus 167 GThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ai~~------g~dVINlSlG~~ 239 (734)
||||||||+|+. .||||+|+|+.+|+++..+ .+.+++++||+|+++. +++|||||||..
T Consensus 75 GThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlGg~ 140 (546)
T 2qtw_B 75 GTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG 140 (546)
T ss_dssp HHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEEEE
T ss_pred HHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCCCC
Confidence 999999999874 6999999999999998876 6788999999999984 899999999976
Q ss_pred CCCCCCCCHHHHHHHHHHhCCcEEEEcCCCCCCCCC-CcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeecccCCC
Q 044427 240 FPFEYFEDPIAIGSFHAMKYGILTSNSAGNSGPDPY-SVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSINSFDL 318 (734)
Q Consensus 240 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 318 (734)
....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+.
T Consensus 141 -----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g------------------------ 191 (546)
T 2qtw_B 141 -----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQD------------------------ 191 (546)
T ss_dssp -----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTS------------------------
T ss_pred -----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCC------------------------
Confidence 2457788888999999999999999997643 3356679999999865431
Q ss_pred CCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccCcCcce
Q 044427 319 NGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFSYPLPA 398 (734)
Q Consensus 319 ~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~ 398 (734)
T Consensus 192 -------------------------------------------------------------------------------- 191 (546)
T 2qtw_B 192 -------------------------------------------------------------------------------- 191 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCcee----eccCCCCCCCCCCCCCCcEEecCCCEeeccCCCCCC
Q 044427 399 TLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVV----SFSSRGPNPITVDILKPDITAPGVDILASWSPVAPP 474 (734)
Q Consensus 399 ~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a----~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~~~~~ 474 (734)
.++ .||++|+. |||+|||++|+++++..
T Consensus 192 -------------------------------------~~a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~--- 223 (546)
T 2qtw_B 192 -------------------------------------QPVTLGTLGTNFGRC--------VDLFAPGEDIIGASSDC--- 223 (546)
T ss_dssp -------------------------------------CBCEETTEECCBSTT--------CCEEEECSSEEEECTTS---
T ss_pred -------------------------------------CcccccCCcCCCCCc--------ceEEecCccEEeeccCC---
Confidence 111 28999974 59999999999998762
Q ss_pred CCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 044427 475 SLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVM 529 (734)
Q Consensus 475 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~ 529 (734)
...|..++|||||||||||++|||+|++|.|++.+||++|++||.+.
T Consensus 224 --------~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~ 270 (546)
T 2qtw_B 224 --------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 270 (546)
T ss_dssp --------TTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEES
T ss_pred --------CCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 25799999999999999999999999999999999999999999764
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=3.5e-42 Score=400.15 Aligned_cols=311 Identities=18% Similarity=0.171 Sum_probs=199.4
Q ss_pred ccccCccCCCCCCCCEEEEEccCCCCCCCCCCCCCCCCCCCCcccccccCCcccCceeEeeeecCCCCccccCCCCCCCC
Q 044427 83 GFSKGKLSSSQEGSVIIGLLDTGIWPESASFNDKGLSPPPAKWKGICTGANFTCNNKIIGARYYNSENIYEVTDFHSPRD 162 (734)
Q Consensus 83 g~~~~~~~~~~G~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~f~~n~ki~g~~~~~~~~~~~~~~~~~~~D 162 (734)
++..+|..+++|+||+|||||||||++||+|.+.- ..+.++|.++.. +.....|
T Consensus 58 nv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~----------------------~~~~~~~~~~~~----dp~p~~~ 111 (600)
T 3hjr_A 58 NLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV----------------------RPGSKNVVTGSD----DPTPTDP 111 (600)
T ss_dssp CCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB----------------------CSCCBCTTTSSS----CCCCCST
T ss_pred CHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc----------------------ccCcceeecCCC----CCCCCCC
Confidence 33446788999999999999999999999997431 112233433321 1123345
Q ss_pred CCCChHHHHHHhccCCCCCCccccccccceeeecCCCeEEEEEEecCCC-CCHHHHHHHH-HHHHhCCCcEEEEccCCCC
Q 044427 163 SEGHGTHTSSTAAGREVPHASYYGLAEGTARGGVPNARISMYKVCWSDG-CATADILAAF-DDAIADGVDIISVSLGSDF 240 (734)
Q Consensus 163 ~~gHGThVAGi~AG~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~g-~~~~~i~~ai-~~ai~~g~dVINlSlG~~~ 240 (734)
..+|||||||||||..+. .| +.||||+|+|+.+|++++.+ ....+++.|+ +++..++++|||+|||...
T Consensus 112 ~~gHGThVAGiIAa~~n~----~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~~~ 182 (600)
T 3hjr_A 112 DTAHGTSVSGIIAAVDNA----IG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYGMSV 182 (600)
T ss_dssp TCCHHHHHHHHHHCCSSS----SS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCCCCC
T ss_pred CCChHHHHHHHHhEeCCC----CC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccCccc
Confidence 789999999999986321 22 28999999999999998765 6677777766 6778899999999999764
Q ss_pred CCCCCCCHHH-----HHHHHH--HhCCcEEEEcCCCCCCCCCCcCCCCCceEEecccccCceeEEEEEeCCCeEeeeeec
Q 044427 241 PFEYFEDPIA-----IGSFHA--MKYGILTSNSAGNSGPDPYSVSNFAPWTLTVAASSIDRKFVAQAVLGNGITYPGLSI 313 (734)
Q Consensus 241 ~~~~~~~~~~-----~a~~~a--~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVga~~~~~~~~~~~~~~~g~~~~g~~~ 313 (734)
......+... .++..+ ..+|+++|+||||.+....... ..+.+ .+++..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~------~~~~~------------~g~~~~------ 238 (600)
T 3hjr_A 183 VDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG------YVLNR------------TGNGPK------ 238 (600)
T ss_dssp SSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT------EEEEE------------ESSCCC------
T ss_pred cCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc------ccccc------------CCCCCC------
Confidence 3333333222 122111 2689999999999764321000 00000 000000
Q ss_pred ccCCCCCceeeeEEcCCCcccCCCCCcccccccccccCCCCCcCceEEEEeeCCcchhhhccCceEEEEecCCccCcccC
Q 044427 314 NSFDLNGISYPLIWGGDAANYSAGANPDIARFCAADALNSYKVEGKIVFCESLLDGSDILAVNGLGTIMADSVFTDLAFS 393 (734)
Q Consensus 314 ~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~ 393 (734)
+ ....|.... .......| ++|.+
T Consensus 239 ---------~------------------~~~~~~~d~--~~~~~~~I----------------sVgA~------------ 261 (600)
T 3hjr_A 239 ---------L------------------PFENSNLDP--SNSNFWNL----------------VVSAL------------ 261 (600)
T ss_dssp ---------C------------------CSSBTTSSG--GGGSSSEE----------------EEEEE------------
T ss_pred ---------C------------------CcccccccC--ccccCcce----------------EEeee------------
Confidence 0 000111000 00000011 12222
Q ss_pred cCcceEEeeccchHHHHHHHhcCCCcEEEEEecceeecCCCCceeeccCCCCCCCCCCCCCCcEEecCCCEe--------
Q 044427 394 YPLPATLISKENGQDILDYIRSTEYPIATIMFGETWKDAMAPKVVSFSSRGPNPITVDILKPDITAPGVDIL-------- 465 (734)
Q Consensus 394 ~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~-------- 465 (734)
...+.++.||++|+.. +++|||..+.
T Consensus 262 --------------------------------------~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt 295 (600)
T 3hjr_A 262 --------------------------------------NADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVT 295 (600)
T ss_dssp --------------------------------------CTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEE
T ss_pred --------------------------------------cCCCCEeecccCCcce--------eeccCCCCCCCCCcceee
Confidence 2345789999999987 8999997632
Q ss_pred eccCCCCCC-------------CCCCCCCCCcceEEeccccchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCC
Q 044427 466 ASWSPVAPP-------------SLDPEDTRSVSFNIISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAYVMDSR 532 (734)
Q Consensus 466 sa~~~~~~~-------------~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~~~~~~ 532 (734)
...++.... .....+.....|..++|||||||||||++|||+|++|+|++++||++|++||++++..
T Consensus 296 ~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~ 375 (600)
T 3hjr_A 296 TDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAK 375 (600)
T ss_dssp ECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTT
T ss_pred ecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCC
Confidence 222211000 0001122236789999999999999999999999999999999999999999998765
Q ss_pred Cccc----------------------------CCCCCCCCccCccccCCCc
Q 044427 533 KQED----------------------------LEFAYGSGHINPAQAIDPG 555 (734)
Q Consensus 533 ~~~~----------------------------~~~~~G~G~vn~~~Al~~~ 555 (734)
..+. ....||+|+||+.+|++.+
T Consensus 376 ~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A 426 (600)
T 3hjr_A 376 HQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELA 426 (600)
T ss_dssp CCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHH
T ss_pred CCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHh
Confidence 4320 2567999999999998744
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=1.9e-24 Score=245.68 Aligned_cols=98 Identities=21% Similarity=0.297 Sum_probs=76.8
Q ss_pred ceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHh---CCCcEEEEccCCCCCCCCC---CCHHHHHHHHHHhCCcEEE
Q 044427 191 TARGGVPNARISMYKVCWSDGCATADILAAFDDAIA---DGVDIISVSLGSDFPFEYF---EDPIAIGSFHAMKYGILTS 264 (734)
Q Consensus 191 ~~~GvAP~A~L~~~kv~~~~g~~~~~i~~ai~~ai~---~g~dVINlSlG~~~~~~~~---~~~~~~a~~~a~~~Gi~vV 264 (734)
.+.||||+|+|+.|++. ....+++++|+||++ ++++|||+|||... ..+. ...+..++.+|..+||+||
T Consensus 273 ~~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e-~~~~~~~~~~~~~~~~~a~~~Gi~vv 347 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPE-DSWAPASIAAMNRAFLDAAALGVTVL 347 (552)
T ss_dssp HHHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEG-GGSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCc-ccCCHHHHHHHHHHHHHHHhCCeEEE
Confidence 34899999999999973 256789999999998 79999999999873 1111 2345666677889999999
Q ss_pred EcCCCCCCCC--------CCcCCCCCceEEecccccC
Q 044427 265 NSAGNSGPDP--------YSVSNFAPWTLTVAASSID 293 (734)
Q Consensus 265 ~AAGN~G~~~--------~~~~~~ap~vitVga~~~~ 293 (734)
+||||+|... ..++...|++++||+++..
T Consensus 348 ~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 348 AAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp EECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred EecCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 9999999653 2345567999999998643
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.84 E-value=3.9e-21 Score=208.37 Aligned_cols=101 Identities=17% Similarity=0.114 Sum_probs=79.3
Q ss_pred eeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHh-CCCcEEEEccCCCCCC---CCCCCHHHHHHHHHHhCCcEEEEcCC
Q 044427 193 RGGVPNARISMYKVCWSDGCATADILAAFDDAIA-DGVDIISVSLGSDFPF---EYFEDPIAIGSFHAMKYGILTSNSAG 268 (734)
Q Consensus 193 ~GvAP~A~L~~~kv~~~~g~~~~~i~~ai~~ai~-~g~dVINlSlG~~~~~---~~~~~~~~~a~~~a~~~Gi~vV~AAG 268 (734)
..+||+++++.|++.+..+++.++++++|+||++ ++++|||||||..... ......+..++.+|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4468999999999987655678899999999998 8999999999986211 11224566677778899999999999
Q ss_pred CCCCCCC-------------CcCCCCCceEEecccccC
Q 044427 269 NSGPDPY-------------SVSNFAPWTLTVAASSID 293 (734)
Q Consensus 269 N~G~~~~-------------~~~~~ap~vitVga~~~~ 293 (734)
|+|...+ ..+...|++++||+++..
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 9997532 334567999999998653
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.82 E-value=2.9e-09 Score=120.22 Aligned_cols=98 Identities=16% Similarity=0.132 Sum_probs=60.8
Q ss_pred eeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHh--CCCcEEEEccCCCCCCCC---CCCHHHHHHHHHHhCCcEEEEcC
Q 044427 193 RGGVPNARISMYKVCWSDGCATADILAAFDDAIA--DGVDIISVSLGSDFPFEY---FEDPIAIGSFHAMKYGILTSNSA 267 (734)
Q Consensus 193 ~GvAP~A~L~~~kv~~~~g~~~~~i~~ai~~ai~--~g~dVINlSlG~~~~~~~---~~~~~~~a~~~a~~~Gi~vV~AA 267 (734)
.++++...++.|-.-+. ......++..+++... +-++||++|||... ... +...+...+..+..+||.|++|+
T Consensus 262 ~a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e-~~~~~~y~~~~~~~~~~~~~~Gitv~~AS 339 (544)
T 3edy_A 262 MSAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDE-DSLSSAYIQRVNTELMKAAARGLTLLFAS 339 (544)
T ss_dssp HHHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEG-GGSCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcc-cccCHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 34455555554433111 1122345554544433 46899999999883 111 11234445556788999999999
Q ss_pred CCCCCCCC----------CcCCCCCceEEeccccc
Q 044427 268 GNSGPDPY----------SVSNFAPWTLTVAASSI 292 (734)
Q Consensus 268 GN~G~~~~----------~~~~~ap~vitVga~~~ 292 (734)
||+|.... ..+...||+++||+++.
T Consensus 340 GD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 340 GDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp CSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 99997531 34556799999999864
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.49 E-value=7.4e-08 Score=85.99 Aligned_cols=64 Identities=9% Similarity=0.058 Sum_probs=56.0
Q ss_pred CCchhhHHHHHHHHhCCccccCcceEEEecceeeEEEEEeCHHHHHHHhcCCCeeEEEeCccccc
Q 044427 9 FPVASTHHSMLQNVLGSTLSAKESLVYSYGRSFNGFAAKLTDEEVARFSETEGVISVIPNHKLKI 73 (734)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~~~~~~i~~L~~~p~V~~v~~~~~~~~ 73 (734)
+.....|++|+++++.+ ...+.+|+|+|++.|+||+++++++++++|+++|+|.+|+|++.++.
T Consensus 50 ~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 50 LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 34566899999999864 34677999999999999999999999999999999999999987754
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.07 E-value=4.8e-06 Score=69.22 Aligned_cols=48 Identities=13% Similarity=0.165 Sum_probs=43.7
Q ss_pred cCcceEEEecceeeEEEEEeCHHHHHHHhcCCCeeEEEeCcccccccCC
Q 044427 29 AKESLVYSYGRSFNGFAAKLTDEEVARFSETEGVISVIPNHKLKIHTTR 77 (734)
Q Consensus 29 ~~~~v~~~y~~~~ng~s~~~~~~~i~~L~~~p~V~~v~~~~~~~~~~~~ 77 (734)
.+.++.|+|++ |+||+++++++++++|+++|+|.+|+|++.++++++.
T Consensus 32 ~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 32 KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC-
T ss_pred cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeec
Confidence 45689999998 9999999999999999999999999999999987654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=97.88 E-value=9.3e-06 Score=73.24 Aligned_cols=62 Identities=10% Similarity=0.046 Sum_probs=49.4
Q ss_pred chhhHHHHHHHHhCCccccCcceEEEecceeeEEEEEeCHHHHHHHhcCCCeeEEEeCccccc
Q 044427 11 VASTHHSMLQNVLGSTLSAKESLVYSYGRSFNGFAAKLTDEEVARFSETEGVISVIPNHKLKI 73 (734)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~~~~~~i~~L~~~p~V~~v~~~~~~~~ 73 (734)
....|.+++.++.. ....+.+++|+|++.||||+++++.+++++|++.|+|.+|++++.++.
T Consensus 62 ~~~~~~~~l~~~~~-~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 62 QSERTARRLQAQAA-RRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp HHHHHHHHHHHHHH-HTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHh-hcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 34456666666542 111456899999999999999999999999999999999999987653
No 41
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.86 E-value=4.3e-05 Score=74.03 Aligned_cols=85 Identities=12% Similarity=0.033 Sum_probs=67.3
Q ss_pred ccccccccCCCCC-------cCceEEEEeeCC-c-----chhhhccCceEEEEecCCc-cC-c-----ccCcCcceEEee
Q 044427 343 ARFCAADALNSYK-------VEGKIVFCESLL-D-----GSDILAVNGLGTIMADSVF-TD-L-----AFSYPLPATLIS 402 (734)
Q Consensus 343 ~~~c~~~~~~~~~-------~~gkiv~~~~~~-~-----~~~~~~~Ga~g~i~~n~~~-~~-~-----~~~~~~p~~~i~ 402 (734)
...|.+..+.... .++||+|++|+. | ..+++++||.++|+||+.. .. . .....||+++|+
T Consensus 83 ~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~Is 162 (194)
T 3icu_A 83 LNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIG 162 (194)
T ss_dssp TTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEEC
T ss_pred cCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEEC
Confidence 5689876643222 478999999999 6 7899999999999999852 11 1 234579999999
Q ss_pred ccchHHHHHHHhcCCCcEEEEEecc
Q 044427 403 KENGQDILDYIRSTEYPIATIMFGE 427 (734)
Q Consensus 403 ~~~~~~l~~~~~~~~~~~~~i~~~~ 427 (734)
..+|+.|++.+.++...+++|....
T Consensus 163 ~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 163 NLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEEECCC
Confidence 9999999999999988887776654
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=97.69 E-value=6.1e-05 Score=61.80 Aligned_cols=57 Identities=16% Similarity=0.244 Sum_probs=47.8
Q ss_pred CchhhHHHHHHHHhCCccccCcceEEEec-ceeeEEEEEeCHHHHHHHhcC--CCeeEEEeCccccc
Q 044427 10 PVASTHHSMLQNVLGSTLSAKESLVYSYG-RSFNGFAAKLTDEEVARFSET--EGVISVIPNHKLKI 73 (734)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~v~~~y~-~~~ng~s~~~~~~~i~~L~~~--p~V~~v~~~~~~~~ 73 (734)
...+.|.++++..- .+|.|.|+ .+|+||+++++++.+++|+++ |.|.+||+++.+++
T Consensus 16 ~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 16 DKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp HHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred HHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 44567878877653 46889994 899999999999999999999 88999999987653
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.48 E-value=0.0026 Score=50.20 Aligned_cols=45 Identities=18% Similarity=0.336 Sum_probs=40.7
Q ss_pred cccCcceEEEecceeeEEEEEeCHHHHHHHhcCCCeeEEEeCcccc
Q 044427 27 LSAKESLVYSYGRSFNGFAAKLTDEEVARFSETEGVISVIPNHKLK 72 (734)
Q Consensus 27 ~~~~~~v~~~y~~~~ng~s~~~~~~~i~~L~~~p~V~~v~~~~~~~ 72 (734)
...+.+|.|+| ..+++++++++.+.+++|+++|+|++|+++...+
T Consensus 19 ~~~gG~i~~~~-~~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 19 LGIGGHIVYQF-KLIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GGGTCEEEEEC-SSSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred HHCCCEEEEEe-cCCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 35678999999 6799999999999999999999999999998654
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.53 E-value=0.034 Score=49.67 Aligned_cols=75 Identities=19% Similarity=0.198 Sum_probs=57.2
Q ss_pred EEEEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEccccCCCCceEEEEEEE-cCceEEEeE
Q 044427 617 YGVFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKIAQQPIMSGAIVWE-DGVHQVRSP 695 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~~-~~~~~v~~P 695 (734)
+.+.+++|+|+|+.+..|+..... -++++|.+-.+ ++|++..++|+|.+.. .+.+.+.+.+. ++...+.++
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~~---~g~~~~~l~v~~~~g~~~~v~ 113 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQS---VGDHSGRLIVCYDTGEKVFVS 113 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCSS---SBCCCCBCEEEESSSCEECCE
T ss_pred eEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcCC---CccEEEEEEEEECCCCEEEEE
Confidence 577889999999999999877642 36678999999 5899999999999985 33566666655 555666666
Q ss_pred EEEE
Q 044427 696 VVIY 699 (734)
Q Consensus 696 ~~~~ 699 (734)
+.+.
T Consensus 114 L~G~ 117 (122)
T 2ys4_A 114 LYGA 117 (122)
T ss_dssp ECCC
T ss_pred EEEE
Confidence 5443
No 45
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=92.85 E-value=0.72 Score=42.02 Aligned_cols=84 Identities=12% Similarity=0.072 Sum_probs=63.1
Q ss_pred EEEEEEEEEecCCCCeeEEEEeeCC----CceEEEEEcCeeEEeeCCcEEEEEEEEEcccc------CCCCceEEEEEEE
Q 044427 617 YGVFTRTVTNVGSPNSTYTVRPYMP----ASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKI------AQQPIMSGAIVWE 686 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~ty~~~v~~~----~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~------~~~~~~~G~i~~~ 686 (734)
..+.+++|+|.|.-+.+|++..... ..-.++++|..-++ .+|++.+++|++.++.. ....-++.-|++.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~ 122 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 122 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEEE
Confidence 4567899999999999999975421 12347778999999 68999999999987542 1123456677776
Q ss_pred -cCceEEEeEEEEEec
Q 044427 687 -DGVHQVRSPVVIYNI 701 (734)
Q Consensus 687 -~~~~~v~~P~~~~~~ 701 (734)
+++.+..+|+.+.+.
T Consensus 123 Ve~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 123 LDRGKDYFLTISGNYL 138 (140)
T ss_dssp ETTSCEEEEEEEEEEC
T ss_pred eecCCcEEEEEecccc
Confidence 788888999988753
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=92.82 E-value=0.23 Score=54.68 Aligned_cols=74 Identities=15% Similarity=0.216 Sum_probs=56.4
Q ss_pred CCCcCceEEEEeeCCcc------------------hhhhccCceEEEEecCCccC--------c--c-cCcCcceEEeec
Q 044427 353 SYKVEGKIVFCESLLDG------------------SDILAVNGLGTIMADSVFTD--------L--A-FSYPLPATLISK 403 (734)
Q Consensus 353 ~~~~~gkiv~~~~~~~~------------------~~~~~~Ga~g~i~~n~~~~~--------~--~-~~~~~p~~~i~~ 403 (734)
..+++|||||+.++.+. .++.++||+|+|++++.... + . ....||++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 46899999999987541 35889999999999964321 1 1 234699999999
Q ss_pred cchHHHHHHHhcCCCcEEEEEec
Q 044427 404 ENGQDILDYIRSTEYPIATIMFG 426 (734)
Q Consensus 404 ~~~~~l~~~~~~~~~~~~~i~~~ 426 (734)
+++..|+..+..+...++++...
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEe
Confidence 99999999998776665555543
No 47
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=91.29 E-value=0.31 Score=53.16 Aligned_cols=64 Identities=16% Similarity=0.140 Sum_probs=51.6
Q ss_pred CCCCCcCceEEEEeeCCc-----chhhhccCceEEEEecCCccCc------ccCcCcceEEeeccchHHHHHHHh
Q 044427 351 LNSYKVEGKIVFCESLLD-----GSDILAVNGLGTIMADSVFTDL------AFSYPLPATLISKENGQDILDYIR 414 (734)
Q Consensus 351 ~~~~~~~gkiv~~~~~~~-----~~~~~~~Ga~g~i~~n~~~~~~------~~~~~~p~~~i~~~~~~~l~~~~~ 414 (734)
+...+++||||++.++.+ ..+++++||+|+|++++....+ .....+|...++.+++..|+..+.
T Consensus 108 ~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 108 VAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred cCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 334579999999998764 7789999999999999865332 134568999999999999999884
No 48
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=91.28 E-value=0.19 Score=61.68 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=27.8
Q ss_pred cccccCc--cCCCCCCCCEEEEEccCCCCCCCCCC
Q 044427 82 MGFSKGK--LSSSQEGSVIIGLLDTGIWPESASFN 114 (734)
Q Consensus 82 ~g~~~~~--~~~~~G~GV~VgVIDtGid~~Hp~f~ 114 (734)
+|+...+ ...+.|+||+|||+|||||+.+|.|+
T Consensus 21 t~~~~fl~~~P~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 21 TGVLNFLQKYPEYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TTTCSSGGGSTTCSSTTCEEEEEESCCCTTSTTSS
T ss_pred hhHHHHHHhCCCCCCCccEEEEEeCCCCCCCCcce
Confidence 4444433 67899999999999999999999997
No 49
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.66 E-value=1 Score=38.85 Aligned_cols=79 Identities=9% Similarity=0.132 Sum_probs=54.2
Q ss_pred EEEEEEEEEecCCCCeeEEEEeeC-CCceEEEEEcCeeEEeeCCcEEEEEEEEEccccCCCCceEEEEEEE-cC-ceEEE
Q 044427 617 YGVFTRTVTNVGSPNSTYTVRPYM-PASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKIAQQPIMSGAIVWE-DG-VHQVR 693 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~ty~~~v~~-~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~~-~~-~~~v~ 693 (734)
..+.+++++|.|+.+..|+..... ..+...+++|.+-.+ ++|++++++|++.+... +.+.=.|.+. .+ ...++
T Consensus 27 ~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~~---g~f~~~i~v~~~g~~~~~~ 102 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSIIL---GNFEEEFLVNVNGSPEPVK 102 (112)
T ss_dssp CEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCCC---EEEEEEECEEESSCSSCCC
T ss_pred EEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCCc---ceEEEEEEEEECCCCceEE
Confidence 467789999999999999984321 113347778999888 58999999999998752 3344456665 33 23344
Q ss_pred eEEEEE
Q 044427 694 SPVVIY 699 (734)
Q Consensus 694 ~P~~~~ 699 (734)
+-+-+.
T Consensus 103 L~i~G~ 108 (112)
T 2e6j_A 103 LTIRGC 108 (112)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444443
No 50
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=90.45 E-value=1.4 Score=38.63 Aligned_cols=57 Identities=16% Similarity=0.116 Sum_probs=46.8
Q ss_pred ceEEEEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEcccc
Q 044427 615 PIYGVFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKI 673 (734)
Q Consensus 615 ~~~~~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~ 673 (734)
...-.+++.+.|....+.+|+++++..+|+.+. .+..+++ ++|+..++.|.|.++..
T Consensus 30 ~I~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 30 EVENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADPD 86 (118)
T ss_dssp SEEEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECGG
T ss_pred eEEEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEEChH
Confidence 456778999999999999999999987776653 3566888 58999999999988764
No 51
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=83.57 E-value=4 Score=39.98 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=56.4
Q ss_pred EEEEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEccccCCCCceEEEEEEE--c--Cc--e
Q 044427 617 YGVFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKIAQQPIMSGAIVWE--D--GV--H 690 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~~--~--~~--~ 690 (734)
..+.+++++|.|+.+.+++... .|.-+++ .+..-.+ ++|++.+++|+++......-+...+.|++. + +. .
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~--~~~~~~I-~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~~ 95 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVVS-LPSFVSL--DDRAFRL-QAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKKA 95 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEEE-CCTTEEC--SCCEEEE-CSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCEE
T ss_pred cceEEEEEEeCCCCceEEEecc-CCCceEe--eeCccee-CCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCccc
Confidence 3556889999999998888743 2555444 3444456 689999999999988765456677777775 3 22 2
Q ss_pred EEEeEEEEEe
Q 044427 691 QVRSPVVIYN 700 (734)
Q Consensus 691 ~v~~P~~~~~ 700 (734)
..++|+.+..
T Consensus 96 ~~~i~v~g~v 105 (220)
T 2qsv_A 96 VDSVMVSLPL 105 (220)
T ss_dssp EEEEEEEEEE
T ss_pred ccEEEEEEEE
Confidence 4578877754
No 52
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=81.89 E-value=7.8 Score=41.10 Aligned_cols=84 Identities=12% Similarity=0.069 Sum_probs=62.5
Q ss_pred EEEEEEEEEecCCCCeeEEEEeeCCC----ceEEEEEcCeeEEeeCCcEEEEEEEEEcccc------CCCCceEEEEEEE
Q 044427 617 YGVFTRTVTNVGSPNSTYTVRPYMPA----SVSVDVEPQSLSFSAVGEQKSFTVKVTGPKI------AQQPIMSGAIVWE 686 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~ty~~~v~~~~----g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~------~~~~~~~G~i~~~ 686 (734)
..+.++|++|+|.-+.+|++.-.... .-.++++|..-++ .+|++.+++|++.+... ....-.+--+++.
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL~ 125 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 125 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEEE
T ss_pred eEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEEEEE
Confidence 56778899999999999999654322 2347889999999 68999999999988762 1123456667776
Q ss_pred -cCceEEEeEEEEEec
Q 044427 687 -DGVHQVRSPVVIYNI 701 (734)
Q Consensus 687 -~~~~~v~~P~~~~~~ 701 (734)
+++++..+|+-+.+-
T Consensus 126 ve~G~d~FI~v~~~~~ 141 (366)
T 3qis_A 126 LDRGKDYFLTISGNYL 141 (366)
T ss_dssp ETTSCEEEEEEEEEEC
T ss_pred EeCCCcEEEEeccccC
Confidence 677777888877754
No 53
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=79.93 E-value=1 Score=49.29 Aligned_cols=31 Identities=23% Similarity=0.308 Sum_probs=26.5
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCcEEecCCCEeeccCC
Q 044427 432 AMAPKVVSFSSRGPNPITVDILKPDITAPGVDILASWSP 470 (734)
Q Consensus 432 ~~~~~~a~fSS~Gpt~~~~~~~KPDI~APG~~I~sa~~~ 470 (734)
...+.++.||++|+.. ||+|||++|+++++.
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 3456799999999865 999999999999874
No 54
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=79.26 E-value=1.8 Score=49.68 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=47.5
Q ss_pred CCcCceEEEEeeCCc-----chhhhccCceEEEEecCCccC--------------------c-c----------------
Q 044427 354 YKVEGKIVFCESLLD-----GSDILAVNGLGTIMADSVFTD--------------------L-A---------------- 391 (734)
Q Consensus 354 ~~~~gkiv~~~~~~~-----~~~~~~~Ga~g~i~~n~~~~~--------------------~-~---------------- 391 (734)
.+++|||||+.++.+ ..+|+++||+|+|++++.... + +
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 579999999998864 778999999999999975310 0 0
Q ss_pred cCcCcceEEeeccchHHHHHHHh
Q 044427 392 FSYPLPATLISKENGQDILDYIR 414 (734)
Q Consensus 392 ~~~~~p~~~i~~~~~~~l~~~~~ 414 (734)
..-.||+..|+.+++..|+..+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 01258999999999999987654
No 55
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=77.69 E-value=1.5 Score=50.80 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=48.9
Q ss_pred CCCcCceEEEEeeCCc-----chhhhccCceEEEEecCCcc-----------------------Cc------cc------
Q 044427 353 SYKVEGKIVFCESLLD-----GSDILAVNGLGTIMADSVFT-----------------------DL------AF------ 392 (734)
Q Consensus 353 ~~~~~gkiv~~~~~~~-----~~~~~~~Ga~g~i~~n~~~~-----------------------~~------~~------ 392 (734)
..+++|||||+.++.+ ..+|+++||+|+|+|++... .+ .+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 4579999999998764 88999999999999986320 00 00
Q ss_pred ----------------CcCcceEEeeccchHHHHHHHhc
Q 044427 393 ----------------SYPLPATLISKENGQDILDYIRS 415 (734)
Q Consensus 393 ----------------~~~~p~~~i~~~~~~~l~~~~~~ 415 (734)
.-.||+.-|+.+++..|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 13589999999999999987653
No 56
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=69.40 E-value=40 Score=32.64 Aligned_cols=78 Identities=12% Similarity=0.061 Sum_probs=49.4
Q ss_pred EEEEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEccccCCCC-c--eEEEEEEE-c-C-ce
Q 044427 617 YGVFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKIAQQP-I--MSGAIVWE-D-G-VH 690 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~-~--~~G~i~~~-~-~-~~ 690 (734)
..+.+++++|.|+.+...+-......-..+. ...-.+ ++||+.+++|++++.... +. | ....|... + . ..
T Consensus 135 ~~~~~f~i~N~G~~pL~I~~v~~scgct~~~--~~~~~i-~PGe~~~i~v~~~~~~~~-g~~~~~~~~~i~v~~N~~~~p 210 (220)
T 2qsv_A 135 TTKAAIEIRNVGAGPLRLHSVTTRNPALTAV--PDRTEI-KPGGSTLLRIAVDPQVMK-AEGWQSIAADISIICNDPQAP 210 (220)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEECSTTEEEE--ESCSEE-CTTCEEEEEEEECHHHHH-HTTCSEEEEEEEEEESCTTCS
T ss_pred eEEEEEEEEECCCCCEEEEEEEeCCCCEeee--cCCccC-CCCCEEEEEEEEecCCCC-CcccceeccEEEEEECCCCCc
Confidence 5778899999999988765433333334443 444456 689999999999987542 22 1 55666654 3 2 23
Q ss_pred EEEeEEEE
Q 044427 691 QVRSPVVI 698 (734)
Q Consensus 691 ~v~~P~~~ 698 (734)
.+++.+-+
T Consensus 211 ~~~l~i~~ 218 (220)
T 2qsv_A 211 LRRIKVKA 218 (220)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 45665544
No 57
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=64.28 E-value=24 Score=31.03 Aligned_cols=53 Identities=15% Similarity=0.123 Sum_probs=43.3
Q ss_pred EEEEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEccc
Q 044427 617 YGVFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGPK 672 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~ 672 (734)
..+..++|+|.++...-|.+.-.+|.-. .|.|..=.+ .+|++.++.|++.+..
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~y--~VrP~~G~i-~P~~s~~v~V~~~~~~ 80 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGVI-DPGSIVTVSVMLQPFD 80 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGGE--EEESCEEEE-CTTCEEEEEEEECCCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCce--EEeCCCcEE-CCCCeEEEEEEECcCc
Confidence 4677899999999999999988777654 457888666 6899999999998743
No 58
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=63.88 E-value=30 Score=30.60 Aligned_cols=50 Identities=22% Similarity=0.282 Sum_probs=35.7
Q ss_pred EEEEEEEEEecCCCC-eeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEc
Q 044427 617 YGVFTRTVTNVGSPN-STYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTG 670 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~-~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~ 670 (734)
..++++||+|.|..+ ..|++.+.. .|-.+. ...+.+ ++|++++|+++..+
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~--t~~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYK--NWTVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEE-TTEEEE--EEEEEE-CTTCEEEEEEEECC
T ss_pred EEEEEEEEEECCCCccCCcEEEEEE-CCEEEe--eEEecc-CCCCeEEEEEEEEc
Confidence 688999999999876 468877654 444443 224466 68999998888764
No 59
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=62.04 E-value=19 Score=32.89 Aligned_cols=51 Identities=24% Similarity=0.246 Sum_probs=42.4
Q ss_pred EEEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEcc
Q 044427 618 GVFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGP 671 (734)
Q Consensus 618 ~~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 671 (734)
.+..++|+|.++....|.+.-..|.-.. |.|..=.+ .+|++.++.|++.+.
T Consensus 37 ~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 37 KKTLIVLTNVTKNIVAFKVRTTAPEKYR--VKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCEEEEEEBCSSSCEEEEEEESCTTTEE--EESSEEEE-CTTCEEEEEEEECSS
T ss_pred EEEEEEEEcCCCCeEEEEEECCCCCcee--ecCCCcEE-CCCCeEEEEEEecCc
Confidence 4568899999999999999888777644 57988667 689999999999774
No 60
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=61.85 E-value=17 Score=42.15 Aligned_cols=56 Identities=14% Similarity=0.159 Sum_probs=36.2
Q ss_pred EEEEEEEEEecCCCCeeEEEEe--eCCCce-----EEEEEcCeeEEeeCCcEEEEEEEEEcccc
Q 044427 617 YGVFTRTVTNVGSPNSTYTVRP--YMPASV-----SVDVEPQSLSFSAVGEQKSFTVKVTGPKI 673 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~ty~~~v--~~~~g~-----~v~v~p~~~~~~~~g~~~~~~vt~~~~~~ 673 (734)
..+++++|||+|+.+..-.+.+ ..|.+. ..-.-=+++.+ ++||+++++++++....
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~l 676 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRRDL 676 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGGGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHHHe
Confidence 5789999999998765444432 223221 11112234566 68999999999998764
No 61
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=59.93 E-value=15 Score=42.69 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=41.6
Q ss_pred CCCCceeeeecC----CCceEEEEEEEEEecCCCCeeEEEE--eeCCCc-e----EEEEEcCee-EEeeCCcEEEEEEEE
Q 044427 601 LNYPSFSLAIED----GQPIYGVFTRTVTNVGSPNSTYTVR--PYMPAS-V----SVDVEPQSL-SFSAVGEQKSFTVKV 668 (734)
Q Consensus 601 ln~psi~~~~~~----~~~~~~~~~~tv~N~~~~~~ty~~~--v~~~~g-~----~v~v~p~~~-~~~~~g~~~~~~vt~ 668 (734)
|.|-.|....+. ++ ..+++++|||+|+.+..-.+. +..|.+ + ..-.-=+++ .+ ++||++++++++
T Consensus 598 LSYTtF~ys~~~~~~~~~--~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~~l 674 (721)
T 2x41_A 598 LSYTTFEYSDLNVSFDGE--TLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVLEI 674 (721)
T ss_dssp BCSSCEEEEEEEEEECSS--EEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEEEE
T ss_pred CCcceeEeeceEeecCCC--eEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEEEE
Confidence 556666544331 22 688999999999865433332 222322 1 111122345 45 689999999999
Q ss_pred Ecccc
Q 044427 669 TGPKI 673 (734)
Q Consensus 669 ~~~~~ 673 (734)
+....
T Consensus 675 ~~~~l 679 (721)
T 2x41_A 675 PVRDL 679 (721)
T ss_dssp EGGGG
T ss_pred CHHHh
Confidence 98764
No 62
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=59.34 E-value=27 Score=31.67 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=42.9
Q ss_pred EEEEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEcc
Q 044427 617 YGVFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGP 671 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 671 (734)
..+..++|+|.++...-|.+.-..|.-.. |.|..=.+ .+|++.++.|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTSEE--EESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCccEE--EcCCCcEE-CCCCeEEEEEEECCC
Confidence 45568899999999999999988877654 57888666 689999999999874
No 63
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=56.78 E-value=35 Score=29.67 Aligned_cols=51 Identities=10% Similarity=0.053 Sum_probs=41.2
Q ss_pred EEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEccc
Q 044427 619 VFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGPK 672 (734)
Q Consensus 619 ~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~ 672 (734)
+.+++|+|.++....|.++-+.+.-.. |.|..=.+ .+|++.++.|+..+..
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~Yr--VrP~~G~I-~Pg~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHYR--VRPVYGFV-DAKGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTEE--EECSEEEE-CTTCEEEEEEEECSCC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCceE--EcCCceEE-CCCCeEEEEEEeCCCC
Confidence 567899999999999999887776655 47887656 6899999999998753
No 64
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=56.56 E-value=39 Score=28.94 Aligned_cols=50 Identities=12% Similarity=0.111 Sum_probs=41.0
Q ss_pred EEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEcc
Q 044427 619 VFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGP 671 (734)
Q Consensus 619 ~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 671 (734)
+.+++|+|.++....|.++-..|.-.. |.|..=.+ .+|++.++.|+..+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y~--VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEYR--IAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSEE--EECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCceE--EcCCceEE-CCCCeEEEEEEeCCC
Confidence 357899999999999999888777654 47887666 689999999998874
No 65
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=54.91 E-value=34 Score=30.09 Aligned_cols=51 Identities=16% Similarity=0.201 Sum_probs=42.1
Q ss_pred EEEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEcc
Q 044427 618 GVFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGP 671 (734)
Q Consensus 618 ~~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 671 (734)
.+-.++|+|.++....|.++-++|.-.. |.|..=.+ .+|++..+.|++.+-
T Consensus 27 ~~~~l~l~N~s~~~vaFKVKTT~p~~y~--VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 27 HTYHIKITNAGGRRIGWAIKTTNMRRLS--VDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCEEEEEEECSSSCEEEEEEESCTTTEE--EESCEEEE-CTTCEEEEEEEECCC
T ss_pred eEEEEEEECCCCCeEEEEEEcCCCCcEE--EECCCeEE-CCCCEEEEEEEecCC
Confidence 4457899999999999999988877654 57888777 689999999998773
No 66
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=52.63 E-value=40 Score=29.47 Aligned_cols=53 Identities=15% Similarity=0.098 Sum_probs=35.6
Q ss_pred EEEEEEEEEecCCCCeeEEE--------EeeCCCceEEE---------EEcCeeEEeeCCcEEEEEEEEEc
Q 044427 617 YGVFTRTVTNVGSPNSTYTV--------RPYMPASVSVD---------VEPQSLSFSAVGEQKSFTVKVTG 670 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~ty~~--------~v~~~~g~~v~---------v~p~~~~~~~~g~~~~~~vt~~~ 670 (734)
...++++|+|.++.+.+.+. .+....|-.|- -.....++ ++||+++|+.+.+.
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE 88 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC
Confidence 68899999999987766554 33333443221 11234567 68999999999983
No 67
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=51.56 E-value=26 Score=41.36 Aligned_cols=161 Identities=16% Similarity=0.094 Sum_probs=86.0
Q ss_pred cceEEeccccchhhHHHHHHHHHHhhCCCCC-HHHHHHHHHhccccccCCCccc------CCCCCCCCccCccccCCCc-
Q 044427 484 VSFNIISGTSMSCPHASGSAAYVKAAHPNWS-PSSIKSALMTTAYVMDSRKQED------LEFAYGSGHINPAQAIDPG- 555 (734)
Q Consensus 484 ~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls-~~~vk~~L~~TA~~~~~~~~~~------~~~~~G~G~vn~~~Al~~~- 555 (734)
.-...++|..++-|.+.-+-|+|...+|.-. ...|-++|.--..|-+..-..+ .|..+-+.. ..+
T Consensus 617 tVVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~p~~~~d~P~~~~~~~-------~~g~ 689 (845)
T 3abz_A 617 TVIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSWPFKLQDNPAFLNFKT-------EFGR 689 (845)
T ss_dssp EEEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCBCSSGGGSTTTTSCSC-------BTTE
T ss_pred EEEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceeeeCchhhCCccccCCC-------CCCc
Confidence 4567889999999998888899999898665 6778888877666543321110 011111110 011
Q ss_pred eeccCC-chhhhhhhhccCCCcceeEEeccCCCcccCCCCCCCCCCCCCCceeee--ecC--CCceEEEEEEEEEecC-C
Q 044427 556 LVYDAT-EVDYVNFLCKQGYNTTIIRQITGDNSSVCNSTEPGRAWDLNYPSFSLA--IED--GQPIYGVFTRTVTNVG-S 629 (734)
Q Consensus 556 lv~~~~-~~d~~~~l~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~psi~~~--~~~--~~~~~~~~~~tv~N~~-~ 629 (734)
..|... .-.|--|... +. + +.-.=..-|.|-+|... .+. ++ ..+++++|||+| +
T Consensus 690 ~~y~eg~~vgYR~y~~~-~~----------~-------plfPFG~GLSYTtF~ys~~~l~v~~~--~~~v~v~V~NtG~~ 749 (845)
T 3abz_A 690 VIYGEDIFVGYRYYEKL-QR----------K-------VAFPFGYGLSYTTFELDISDFKVTDD--KIAISVDVKNTGDK 749 (845)
T ss_dssp EECTTTTCCTHHHHHHH-TC----------C-------CSBCTTCCBCSSCEEEEEEEEEECSS--EEEEEEEEEECCSS
T ss_pred eeccCCccCCCcchhcC-CC----------c-------eeecccCCCcceeEEEecccccccCC--eEEEEEEEEECCcC
Confidence 122221 0122211100 00 0 00011234567777666 432 22 688999999999 7
Q ss_pred CCeeEEEEe--eCCCc-----eEEEEEcCeeEEeeCCcEEEEEEEEE-ccc
Q 044427 630 PNSTYTVRP--YMPAS-----VSVDVEPQSLSFSAVGEQKSFTVKVT-GPK 672 (734)
Q Consensus 630 ~~~ty~~~v--~~~~g-----~~v~v~p~~~~~~~~g~~~~~~vt~~-~~~ 672 (734)
.+..-.+.+ ..+.+ +.--.-=+++.+ ++||+++++++++ ...
T Consensus 750 ~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~~ 799 (845)
T 3abz_A 750 FAGSEVVQVYFSALNSKVSRPVKELKGFEKVHL-EPGEKKTVNIDLELKDA 799 (845)
T ss_dssp CCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEE-CTTCEEEEEEEEEHHHH
T ss_pred CCcceeeeeeEeCCCCCcchhhheeccceeEEE-CCCCEEEEEEEeCChHH
Confidence 654433322 22221 111112234566 6899999999999 554
No 68
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=50.83 E-value=80 Score=35.28 Aligned_cols=78 Identities=17% Similarity=0.079 Sum_probs=47.7
Q ss_pred CCceeeeecCCCceEEEEEEEEEecCCCCeeE-EEEeeCCCceEEEEEcCeeEEeeCCcEEEEEEEEEccccCCCCceEE
Q 044427 603 YPSFSLAIEDGQPIYGVFTRTVTNVGSPNSTY-TVRPYMPASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKIAQQPIMSG 681 (734)
Q Consensus 603 ~psi~~~~~~~~~~~~~~~~tv~N~~~~~~ty-~~~v~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G 681 (734)
.|.+++. .|. +.+++++|+|-...+..- ++++..+.+.+++. ....+ ++|++++++++|+++.....+.|.=
T Consensus 364 ~~~~~~~--~g~--~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~~~~g~y~l 436 (601)
T 1w8o_A 364 IPDVALE--PGQ--QVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAGTTPGRYRV 436 (601)
T ss_dssp CCCEEEC--TTC--EEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCTTCCCEEEEE
T ss_pred Cccceec--CCc--eeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCCCCCCCcEEe
Confidence 3555544 333 688899999976543322 33355578887765 34455 5799999988998886543333333
Q ss_pred EEEEEc
Q 044427 682 AIVWED 687 (734)
Q Consensus 682 ~i~~~~ 687 (734)
-+.+..
T Consensus 437 ~~~~~~ 442 (601)
T 1w8o_A 437 GATLRT 442 (601)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 344443
No 69
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=45.96 E-value=1.3e+02 Score=31.71 Aligned_cols=65 Identities=18% Similarity=0.203 Sum_probs=41.2
Q ss_pred EEEEEEEEEecCCCCee---EEE-Ee--eC----------------CCceEEEEEcCeeEEeeCCcEEEEEEEEEccc--
Q 044427 617 YGVFTRTVTNVGSPNST---YTV-RP--YM----------------PASVSVDVEPQSLSFSAVGEQKSFTVKVTGPK-- 672 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~t---y~~-~v--~~----------------~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~-- 672 (734)
+.+++++|||.|+++.. |+. .+ .. ..| ++ +|+ -+ ++||+++++|+++-..
T Consensus 299 ~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI-~PGETrt~~V~a~da~We 372 (419)
T 3rfr_A 299 ELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VI-APGESKEIVVKIQDARWD 372 (419)
T ss_dssp EEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CB-CTTCEEEEEEEEECHHHH
T ss_pred EEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--Cc-CCCcceEEEEEeehHHHH
Confidence 78999999999998753 221 11 10 114 33 555 56 6999999998887543
Q ss_pred --------cCCCCceEEEEEEEc
Q 044427 673 --------IAQQPIMSGAIVWED 687 (734)
Q Consensus 673 --------~~~~~~~~G~i~~~~ 687 (734)
...+...-|-|-|.|
T Consensus 373 veRL~~l~~D~dSrfgGLLfF~d 395 (419)
T 3rfr_A 373 IERLSDLAYDTDSQVGGLLFFFT 395 (419)
T ss_dssp HTTGGGGGGSSSCEEEEEEEEEC
T ss_pred HHHHhhhhcCchhheeEEEEEEc
Confidence 123444556666665
No 70
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=40.82 E-value=18 Score=27.42 Aligned_cols=35 Identities=20% Similarity=0.152 Sum_probs=26.8
Q ss_pred cchhhHHHHHHHHHHhhCCCCCHHHHHHHHHhccc
Q 044427 493 SMSCPHASGSAAYVKAAHPNWSPSSIKSALMTTAY 527 (734)
Q Consensus 493 SmAaP~VAG~aALl~q~~P~ls~~~vk~~L~~TA~ 527 (734)
|-..|..--.+..|++.||+++...|+..|...-.
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 33444445567789999999999999999987643
No 71
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=40.27 E-value=3.1e+02 Score=28.49 Aligned_cols=67 Identities=19% Similarity=0.287 Sum_probs=41.4
Q ss_pred EEEEEEEEEecCCCCee---EEE-Eee------------CC------CceEEEEEcCeeEEeeCCcEEEEEEEEEccc--
Q 044427 617 YGVFTRTVTNVGSPNST---YTV-RPY------------MP------ASVSVDVEPQSLSFSAVGEQKSFTVKVTGPK-- 672 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~~t---y~~-~v~------------~~------~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~-- 672 (734)
+.+++++|||.|+++.. |+. .+. .| .|+ +|+|++ -+ ++||++++.|+++-..
T Consensus 265 ~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL--~vsd~~-pI-~PGETr~~~v~a~da~We 340 (382)
T 1yew_A 265 AMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGL--SVSDNS-PL-APGETRTVDVTASDAAWE 340 (382)
T ss_dssp EEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCE--EESCCS-CB-CTTCEEEEEEEEECHHHH
T ss_pred EEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCc--eeCCCC-Cc-CCCceeEEEEEeehHHHH
Confidence 78899999999998754 221 111 12 143 445654 24 6899999998887532
Q ss_pred --------cCCCCceEEEEEEEc
Q 044427 673 --------IAQQPIMSGAIVWED 687 (734)
Q Consensus 673 --------~~~~~~~~G~i~~~~ 687 (734)
...+...-|-|-|.|
T Consensus 341 veRL~~l~~D~dSrfgGLLfF~d 363 (382)
T 1yew_A 341 VYRLSDIIYDPDSRFAGLLFFFD 363 (382)
T ss_dssp HTCGGGGGGSSCCEEEEEEEEEE
T ss_pred HHHhhhhhcCcccceeEEEEEEc
Confidence 122444556666665
No 72
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=37.63 E-value=8.8 Score=33.55 Aligned_cols=54 Identities=22% Similarity=0.269 Sum_probs=33.8
Q ss_pred EEEEEEecCCCCeeEEEEee-CCCceEEEEEcCeeEEe-eCCcEEEEEEEEEcccc
Q 044427 620 FTRTVTNVGSPNSTYTVRPY-MPASVSVDVEPQSLSFS-AVGEQKSFTVKVTGPKI 673 (734)
Q Consensus 620 ~~~tv~N~~~~~~ty~~~v~-~~~g~~v~v~p~~~~~~-~~g~~~~~~vt~~~~~~ 673 (734)
..+-|+|.+.+..+..+.+. .|.|++++++|+++++. ..-++++|.|+++....
T Consensus 57 ~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g~ 112 (119)
T 2kq1_A 57 VFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMINL 112 (119)
T ss_dssp EEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCCC
T ss_pred EEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECCC
Confidence 34444555543333333455 58899999999987764 34567888877766543
No 73
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=36.04 E-value=44 Score=27.96 Aligned_cols=49 Identities=12% Similarity=0.170 Sum_probs=30.2
Q ss_pred EEEEEEEEecCCCCeeEEEEee-------------CCCceEEEEE-cCeeEEeeCCcEEEEEEE
Q 044427 618 GVFTRTVTNVGSPNSTYTVRPY-------------MPASVSVDVE-PQSLSFSAVGEQKSFTVK 667 (734)
Q Consensus 618 ~~~~~tv~N~~~~~~ty~~~v~-------------~~~g~~v~v~-p~~~~~~~~g~~~~~~vt 667 (734)
.+.+++|+|.|+.+.---.+.. ..-|..+.+- -..+.| ++|+++++++.
T Consensus 20 ~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~r~V~LV 82 (101)
T 4ep8_B 20 ATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRF-EPGQKREVELV 82 (101)
T ss_dssp CEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEE-CTTCEEEEEEE
T ss_pred CEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEee-CCCCeEEEEEE
Confidence 5678999999998653222111 1235555541 135678 68999988754
No 74
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=30.61 E-value=47 Score=29.00 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=29.8
Q ss_pred EEEEEEEEecCCCCeeEEEEee---C----------CCceEEEEE-cCeeEEeeCCcEEEEEEE
Q 044427 618 GVFTRTVTNVGSPNSTYTVRPY---M----------PASVSVDVE-PQSLSFSAVGEQKSFTVK 667 (734)
Q Consensus 618 ~~~~~tv~N~~~~~~ty~~~v~---~----------~~g~~v~v~-p~~~~~~~~g~~~~~~vt 667 (734)
.+.+++|+|.|+.+.---.+.. . .-|..+.+- -..+.| ++|+++++++.
T Consensus 26 ~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~k~V~LV 88 (126)
T 4ac7_B 26 EKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARF-EPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEE-CTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEee-CCCCeEEEEEE
Confidence 4678999999998653222211 1 125555442 135678 68999888754
No 75
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=30.61 E-value=47 Score=29.00 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=29.8
Q ss_pred EEEEEEEEecCCCCeeEEEEee---C----------CCceEEEEE-cCeeEEeeCCcEEEEEEE
Q 044427 618 GVFTRTVTNVGSPNSTYTVRPY---M----------PASVSVDVE-PQSLSFSAVGEQKSFTVK 667 (734)
Q Consensus 618 ~~~~~tv~N~~~~~~ty~~~v~---~----------~~g~~v~v~-p~~~~~~~~g~~~~~~vt 667 (734)
.+.+++|+|.|+.+.---.+.. . .-|..+.+- -..+.| ++|+++++++.
T Consensus 26 ~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~k~V~LV 88 (126)
T 4ubp_B 26 EKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARF-EPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEE-CTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEee-CCCCeEEEEEE
Confidence 4678999999998653222211 1 125555442 135678 68999888754
No 76
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=28.93 E-value=2e+02 Score=24.62 Aligned_cols=23 Identities=22% Similarity=0.424 Sum_probs=16.8
Q ss_pred EEEEEEEEEecCCCC-eeEEEEee
Q 044427 617 YGVFTRTVTNVGSPN-STYTVRPY 639 (734)
Q Consensus 617 ~~~~~~tv~N~~~~~-~ty~~~v~ 639 (734)
..+++.+|+|.|... ..|++.+.
T Consensus 20 ~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 20 VNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEE
T ss_pred eEEEEEEEEECCCCCCCCEEEEEE
Confidence 688999999999754 34555543
No 77
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=28.69 E-value=3.3e+02 Score=26.88 Aligned_cols=84 Identities=8% Similarity=-0.070 Sum_probs=50.6
Q ss_pred EEEEEEEEecCCCCeeEEEEeeCCC--------ceEEEEEcCeeEEeeCCcEEEEEEEEEccccCCCCceEEEEEEEc--
Q 044427 618 GVFTRTVTNVGSPNSTYTVRPYMPA--------SVSVDVEPQSLSFSAVGEQKSFTVKVTGPKIAQQPIMSGAIVWED-- 687 (734)
Q Consensus 618 ~~~~~tv~N~~~~~~ty~~~v~~~~--------g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~G~i~~~~-- 687 (734)
...+++|+|.++.+..-.+-++... ...+.++|..+.+ ++|+++.++|.......+.+...-=+|.+.+
T Consensus 44 k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~~LP~DrESlf~lnv~eIP 122 (257)
T 3q48_A 44 REVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKAPLPTDRESLFWLNILEVP 122 (257)
T ss_dssp SEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCCCCCSSSCEEEEEEEEEEC
T ss_pred cEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCCCCCCCceeEEEEEeeecC
Confidence 4468899998876433333333211 2348889999999 6899999999766544444433222333331
Q ss_pred ----C-c------eEEEeEEEEEecC
Q 044427 688 ----G-V------HQVRSPVVIYNIL 702 (734)
Q Consensus 688 ----~-~------~~v~~P~~~~~~~ 702 (734)
. . -.-|+|+..+...
T Consensus 123 p~~~~~~n~Lqiair~rIKLFyRP~~ 148 (257)
T 3q48_A 123 PRDEDENNALQFSFRSRFKLFFRPSQ 148 (257)
T ss_dssp CC---------CCEEEEEEEEEECTT
T ss_pred CCCCCCCceEEEEEEEEEEEEEeccc
Confidence 1 1 1357888888644
No 78
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=24.61 E-value=3.1e+02 Score=23.01 Aligned_cols=64 Identities=11% Similarity=0.105 Sum_probs=40.1
Q ss_pred ceeeeecCCCceEEEEEEEEEecCCCCeeEEEEeeCCCceEEEEEcCeeEEe-eCCcEEEEEEEEEccccCCCCceEEEE
Q 044427 605 SFSLAIEDGQPIYGVFTRTVTNVGSPNSTYTVRPYMPASVSVDVEPQSLSFS-AVGEQKSFTVKVTGPKIAQQPIMSGAI 683 (734)
Q Consensus 605 si~~~~~~~~~~~~~~~~tv~N~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~-~~g~~~~~~vt~~~~~~~~~~~~~G~i 683 (734)
.+++.+.+. ...+++|++|-......|+-....|. .+++. ...++.+|+|.+... ..++.|..
T Consensus 35 vlsV~F~~~---~~~vTItItNe~TG~~VYs~~~s~p~---------~i~IdLnge~sG~Y~IeI~~~----~~~LtG~F 98 (101)
T 3sd2_A 35 ILNVSFGRA---KDYAIITVTNKATGEIVHSKTYHNTS---------IVMIDMSSCEKGEYTIHIILN----DCLLEGTF 98 (101)
T ss_dssp EEEEEESSC---CSCEEEEEEETTTCCEEEEEEESSCS---------EEEEECTTSCSEEEEEEEEET----TEEEEEEE
T ss_pred EEEEEeccC---CCcEEEEEEECCCCcEEEEEeccCCc---------EEEEEcCCCcCceEEEEEEeC----CcEEEEEE
Confidence 455666543 34678999998877888987665433 33332 233568888887755 33566654
Q ss_pred E
Q 044427 684 V 684 (734)
Q Consensus 684 ~ 684 (734)
.
T Consensus 99 ~ 99 (101)
T 3sd2_A 99 T 99 (101)
T ss_dssp E
T ss_pred E
Confidence 3
No 79
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=23.56 E-value=54 Score=30.04 Aligned_cols=33 Identities=15% Similarity=0.101 Sum_probs=27.0
Q ss_pred EeccccchhhHHHHHHHHHHhhCCCCCHHHHHHH
Q 044427 488 IISGTSMSCPHASGSAAYVKAAHPNWSPSSIKSA 521 (734)
Q Consensus 488 ~~sGTSmAaP~VAG~aALl~q~~P~ls~~~vk~~ 521 (734)
.+.|-| =|++|-|.+|||++.+-..+|++|.+.
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 334555 479999999999999999999998753
No 80
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=23.54 E-value=3.3e+02 Score=22.92 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=23.0
Q ss_pred EEEEEEEEecCCCCe-eEEEEeeCCCceEEE
Q 044427 618 GVFTRTVTNVGSPNS-TYTVRPYMPASVSVD 647 (734)
Q Consensus 618 ~~~~~tv~N~~~~~~-ty~~~v~~~~g~~v~ 647 (734)
.+.+++|+|.+..+. .|++++..|.|.+|+
T Consensus 17 f~~~vtVtN~g~~~i~gWtv~~~~p~g~~it 47 (107)
T 3ndz_E 17 ASVNVTIKNNGTTPINGWTLKWTMPINQTIT 47 (107)
T ss_dssp EEEEEEEEECSSSCEESCEEEEECCTTEEEE
T ss_pred EEEEEEEEeCCCCcccCcEEEEEcCCCCEEe
Confidence 567889999997765 499988887776553
No 81
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=21.57 E-value=5e+02 Score=24.80 Aligned_cols=59 Identities=15% Similarity=0.148 Sum_probs=39.2
Q ss_pred EEEEEEEEecCCCCeeEEEEeeCC-----CceEEEEEcCeeEEeeCCcEEEEEEEEEccccCCCC
Q 044427 618 GVFTRTVTNVGSPNSTYTVRPYMP-----ASVSVDVEPQSLSFSAVGEQKSFTVKVTGPKIAQQP 677 (734)
Q Consensus 618 ~~~~~tv~N~~~~~~ty~~~v~~~-----~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~ 677 (734)
...+++|+|.++.+.--..-++.. ...-+.++|.-+.+ ++|+++.++|.......+.+.
T Consensus 28 k~~sl~l~N~~~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~~~LP~DR 91 (218)
T 4ay0_A 28 AGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAGGVFPRDK 91 (218)
T ss_dssp SCEEEEEECCSSSCEEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECSCCCCSSS
T ss_pred cEEEEEEEcCCCCCEEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecCCCCCcCc
Confidence 346788999876654333334321 12237789999999 689999999977665555444
No 82
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=20.58 E-value=2.5e+02 Score=23.82 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=17.6
Q ss_pred CCceEEEEEcCeeEEeeCCcE-EEEEEEEEccc
Q 044427 641 PASVSVDVEPQSLSFSAVGEQ-KSFTVKVTGPK 672 (734)
Q Consensus 641 ~~g~~v~v~p~~~~~~~~g~~-~~~~vt~~~~~ 672 (734)
.+|........+|+|. +||+ |+++|.+--..
T Consensus 47 ~~g~Dy~~~~g~l~F~-~Get~k~i~V~I~dD~ 78 (114)
T 3e9t_A 47 SAGTDFVGRKGLLSFP-PGVDEQRFRIEVIDDD 78 (114)
T ss_dssp CBTTTBCCCEEEEEEC-TTCCEEEEEEEBCCCS
T ss_pred CCCCCceEcceEEEEe-CCcEEEEEEEEEEcCC
Confidence 3444443345688994 6654 66666654443
Done!