BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044428
(457 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 155/301 (51%), Gaps = 27/301 (8%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQ 208
++E+ + L +R S ++Q A++ F N+LG G FG VYKG L+DGT VA+K L+
Sbjct: 14 AEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVK--RLK 71
Query: 209 LERTF---VSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-- 263
ER + F +E E++ HRNL+++ C + LV +M NGS+ L
Sbjct: 72 EERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE 131
Query: 264 -NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322
LD +R I + L YLH H IIH D+K +NILLDE A V DFG++K
Sbjct: 132 SQPPLDWPKRQRIALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 190
Query: 323 LLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLE------TFSRKKPT 372
L+ + D + TIG++APE G S K DV+ YG++LLE F +
Sbjct: 191 LM-DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 249
Query: 373 NDLGEMSLKHWVNQSLPH-KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDE 431
ND ++ L WV L KL +VD +L + K + + +++ +AL C SP E
Sbjct: 250 ND-DDVMLLDWVKGLLKEKKLEALVDVDL-----QGNYKDEEVEQLIQVALLCTQSSPME 303
Query: 432 R 432
R
Sbjct: 304 R 304
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 154/301 (51%), Gaps = 27/301 (8%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQ 208
++E+ + L +R S ++Q A++ F N+LG G FG VYKG L+DG VA+K L+
Sbjct: 6 AEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK--RLK 63
Query: 209 LERTF---VSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-- 263
ERT + F +E E++ HRNL+++ C + LV +M NGS+ L
Sbjct: 64 EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE 123
Query: 264 -NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322
LD +R I + L YLH H IIH D+K +NILLDE A V DFG++K
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLH-DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182
Query: 323 LLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLE------TFSRKKPT 372
L+ + D + IG++APE G S K DV+ YG++LLE F +
Sbjct: 183 LM-DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241
Query: 373 NDLGEMSLKHWVNQSLPH-KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDE 431
ND ++ L WV L KL +VD +L + K + + +++ +AL C SP E
Sbjct: 242 ND-DDVMLLDWVKGLLKEKKLEALVDVDL-----QGNYKDEEVEQLIQVALLCTQSSPME 295
Query: 432 R 432
R
Sbjct: 296 R 296
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 21/300 (7%)
Query: 154 LLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF 213
L+P ++R + +D++ ATN FD L+G G FG VYKG L DG VA+K + +
Sbjct: 21 LVPFESYR-VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGI 79
Query: 214 VSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHN---YFLDIL 270
F +E E L RH +L+ ++ C + L+ ++M NG+L++ LY + +
Sbjct: 80 EEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139
Query: 271 ERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330
+RL I I L YLH IIH D+K NILLDEN V ++DFGISK E D +
Sbjct: 140 QRLEICIGAARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT 195
Query: 331 LIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETF-SRKKPTNDLGE--MSLKHW 383
+ T+GY+ PE G ++ K DVYS+G++L E +R L ++L W
Sbjct: 196 HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
Query: 384 VNQSLPH-KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKL 442
+S + +L ++VD NL + + + L + + A+ C S ++R + KL
Sbjct: 256 AVESHNNGQLEQIVDPNLADK-----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 21/300 (7%)
Query: 154 LLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF 213
L+P ++R + +D++ ATN FD L+G G FG VYKG L DG VA+K + +
Sbjct: 21 LVPFESYR-VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGI 79
Query: 214 VSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHN---YFLDIL 270
F +E E L RH +L+ ++ C + L+ ++M NG+L++ LY + +
Sbjct: 80 EEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139
Query: 271 ERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330
+RL I I L YLH IIH D+K NILLDEN V ++DFGISK E +
Sbjct: 140 QRLEICIGAARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQT 195
Query: 331 LIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETF-SRKKPTNDLGE--MSLKHW 383
+ T+GY+ PE G ++ K DVYS+G++L E +R L ++L W
Sbjct: 196 HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
Query: 384 VNQSLPH-KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKL 442
+S + +L ++VD NL + + + L + + A+ C S ++R + KL
Sbjct: 256 AVESHNNGQLEQIVDPNLADK-----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 128/241 (53%), Gaps = 27/241 (11%)
Query: 142 QNRSTKKSDEEDLLPLVTWRRISYLDIQRATNEFDE------CNLLGIGSFGSVYKGTLS 195
+N+S + SD + S+ +++ TN FDE N +G G FG VYKG ++
Sbjct: 1 ENKSLEVSD-------TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN 53
Query: 196 DGTNVAIK----IFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFM 251
+ T VA+K + ++ E F+ E +V+ +H NL+++L S+ D LV +M
Sbjct: 54 N-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 252 PNGSLEKWLYSHNYFLDILERLNIMIDVGLA--LEYLHYGHALAPIIHCDLKPSNILLDE 309
PNGSL L + + + I G A + +LH H IH D+K +NILLDE
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH----IHRDIKSANILLDE 168
Query: 310 NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE---GIVSTKCDVYSYGILLLETF 366
A +SDFG+++ + +++ ++ + T YMAPE G ++ K D+YS+G++LLE
Sbjct: 169 AFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEII 228
Query: 367 S 367
+
Sbjct: 229 T 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 27/241 (11%)
Query: 142 QNRSTKKSDEEDLLPLVTWRRISYLDIQRATNEFDE------CNLLGIGSFGSVYKGTLS 195
+N+S + SD + S+ +++ TN FDE N +G G FG VYKG ++
Sbjct: 1 ENKSLEVSD-------TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN 53
Query: 196 DGTNVAIK----IFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFM 251
+ T VA+K + ++ E F+ E +V+ +H NL+++L S+ D LV +M
Sbjct: 54 N-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 252 PNGSLEKWLYSHNYFLDILERLNIMIDVGLA--LEYLHYGHALAPIIHCDLKPSNILLDE 309
PNGSL L + + + I G A + +LH H IH D+K +NILLDE
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH----IHRDIKSANILLDE 168
Query: 310 NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE---GIVSTKCDVYSYGILLLETF 366
A +SDFG+++ + +++ + + T YMAPE G ++ K D+YS+G++LLE
Sbjct: 169 AFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEII 228
Query: 367 S 367
+
Sbjct: 229 T 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 20/223 (8%)
Query: 160 WRRISYLDIQRATNEFDE------CNLLGIGSFGSVYKGTLSDGTNVAIK----IFNLQL 209
+ S+ +++ TN FDE N +G G FG VYKG +++ T VA+K + ++
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 64
Query: 210 ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDI 269
E F+ E +V+ +H NL+++L S+ D LV +MPNGSL L + +
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 270 LERLNIMIDVGLA--LEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327
+ I G A + +LH H IH D+K +NILLDE A +SDFG+++ +
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 328 DDSLIQTKTMATIGYMAPE---GIVSTKCDVYSYGILLLETFS 367
++ + + T YMAPE G ++ K D+YS+G++LLE +
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 20/223 (8%)
Query: 160 WRRISYLDIQRATNEFDE------CNLLGIGSFGSVYKGTLSDGTNVAIK----IFNLQL 209
+ S+ +++ TN FDE N G G FG VYKG +++ T VA+K + ++
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 210 ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYF--L 267
E F+ E +V +H NL+++L S+ D LV + PNGSL L + L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 268 DILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327
R I + +LH H IH D+K +NILLDE A +SDFG+++ +
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 328 DDSLIQTKTMATIGYMAPE---GIVSTKCDVYSYGILLLETFS 367
+ ++ + T Y APE G ++ K D+YS+G++LLE +
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 131/263 (49%), Gaps = 27/263 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILSG 237
+G GSFG+V++ G++VA+KI + ER F E +++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVLFMGA 102
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYF--LDILERLNIMIDVGLALEYLHYGHALAPI 295
+ ++V E++ GSL + L+ LD RL++ DV + YLH + PI
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP--PI 160
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VST 351
+H DLK N+L+D+ V DFG+S+L + L T +MAPE + +
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 352 KCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVN---------QSLPHKLAEVVD---SN 399
K DVYS+G++L E + ++P +L + V ++L ++A +++ +N
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTN 278
Query: 400 LVRREHSFSAKMDCLLRIMNLAL 422
+ SF+ MD L ++ A+
Sbjct: 279 EPWKRPSFATIMDLLRPLIKSAV 301
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 131/289 (45%), Gaps = 41/289 (14%)
Query: 164 SYLDIQRATNEFDE-----C----NLLGIGSFGSVYKGTLS--DGTNVAIKIFNLQL--- 209
+Y D RA ++F + C ++G G FG V G L +VA+ I L++
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 210 ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDI 269
E+ F E ++ H N++ + + +V+EFM NG+L+ +L H+ +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 270 LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329
++ + ++ + + YL A +H DL NIL++ N+V VSDFG+S+++ E D
Sbjct: 145 IQLVGMLRGIAAGMRYL----ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI-EDDP 199
Query: 330 SLIQTKTMATIG--YMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHW 383
+ T T I + APE I ++ DV+SYGI++ E S GE
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS-------YGERPYWDM 252
Query: 384 VNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
NQ + + E + A MDC + L LDC + ER
Sbjct: 253 SNQDVIKAIEE---------GYRLPAPMDCPAGLHQLMLDCWQKERAER 292
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 135/264 (51%), Gaps = 29/264 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILSG 237
+G GSFG+V++ G++VA+KI + ER F E +++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVLFMGA 102
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYF--LDILERLNIMIDVGLALEYLHYGHALAPI 295
+ ++V E++ GSL + L+ LD RL++ DV + YLH + PI
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP--PI 160
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA-TIGYMAPEGI----VS 350
+H +LK N+L+D+ V DFG+S+L + + +K+ A T +MAPE + +
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS---TFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 351 TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVN---------QSLPHKLAEVVD---S 398
K DVYS+G++L E + ++P +L + V ++L ++A +++ +
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWT 277
Query: 399 NLVRREHSFSAKMDCLLRIMNLAL 422
N + SF+ MD L ++ A+
Sbjct: 278 NEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V+E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 199 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 242
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 243 SLHDLMCQCWRKDPEER 259
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 41/295 (13%)
Query: 163 ISYLDIQRATNEFDECNLLGIGSFGSVYKGTLS----DGTNVAIKIF-NLQLERTFVSFN 217
+SY+ I+ ++G G FG V +G L + VAIK ER F
Sbjct: 15 VSYVKIE---------EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL 65
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
SE ++ H N+I++ +N ++ EFM NG+L+ +L ++ +++ + ++
Sbjct: 66 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 125
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ + YL A +H DL NIL++ N+V VSDFG+S+ L E +T ++
Sbjct: 126 GIASGMRYL----AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 338 A---TIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH 390
I + APE I ++ D +SYGI++ E S GE NQ +
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS-------FGERPYWDMSNQDV-- 232
Query: 391 KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445
N + +++ DC + L LDC + + R + L K+
Sbjct: 233 -------INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNL--QLERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G GSFG+VYKG +VA+KI + F +F +E VLR RH N++ + G
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGY 100
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
D A+V ++ SL K L+ + + ++I ++YLH + IIH
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN----IIHR 156
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VST 351
D+K +NI L E + + DFG++ + S + ++ +MAPE I S
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 352 KCDVYSYGILLLETFSRKKP 371
+ DVYSYGI+L E + + P
Sbjct: 217 QSDVYSYGIVLYELMTGELP 236
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 241 LDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 129
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 188
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 189 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 232
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 233 SLHDLMCQCWRKEPEER 249
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V+E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 199 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 242
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 243 SLHDLMCQCWRKDPEER 259
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 199 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 242
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 243 SLHDLMCQCWRKDPEER 259
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 34/260 (13%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILSG 237
LG G FG V+ GT + T VAIK N+ E +F E +V++ +RH L+++ +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----AFLQEAQVMKKLRHEKLVQLYAV 248
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPII 296
S +V E+M GSL +L +L + + +++ + + Y+ + +
Sbjct: 249 VSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YV 303
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTK 352
H DL+ +NIL+ EN+V V+DFG+ +L+ E ++ + I + APE G + K
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 353 CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMD 412
DV+S+GILL E ++ G + VN+ EV+D V R + +
Sbjct: 363 SDVWSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPE 406
Query: 413 CLLRIMNLALDCCMESPDER 432
C + +L C + P+ER
Sbjct: 407 CPESLHDLMCQCWRKDPEER 426
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 388
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 389 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 448 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 491
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 492 SLHDLMCQCWRKEPEER 508
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 241 LDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 132
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 133 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 192 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 235
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 236 SLHDLMCQCWRKEPEER 252
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 31/278 (11%)
Query: 179 NLLGIGSFGSVYKGTLSDGTN-----VAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLI 232
++G G FG VYKG L + VAIK E+ V F E ++ H N+I
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL 292
++ S ++ E+M NG+L+K+L + +L+ + ++ + ++YL A
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL----AN 165
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-TMATIGYMAPEGI--- 348
+H DL NIL++ N+V VSDFG+S++L + ++ T I + APE I
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 349 -VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSF 407
++ DV+S+GI++ E + GE N H++ + ++
Sbjct: 226 KFTSASDVWSFGIVMWEVMT-------YGERPYWELSN----HEVMKAINDGF-----RL 269
Query: 408 SAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445
MDC I L + C + R + + L K+
Sbjct: 270 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 128
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 129 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 188 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 231
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 232 SLHDLMCQCWRKDPEER 248
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 130
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 131 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 190 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 233
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 234 SLHDLMCQCWRKDPEER 250
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 41/295 (13%)
Query: 163 ISYLDIQRATNEFDECNLLGIGSFGSVYKGTLS----DGTNVAIKIF-NLQLERTFVSFN 217
+SY+ I+ ++G G FG V +G L + VAIK ER F
Sbjct: 13 VSYVKIE---------EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL 63
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
SE ++ H N+I++ +N ++ EFM NG+L+ +L ++ +++ + ++
Sbjct: 64 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 123
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ + YL A +H DL NIL++ N+V VSDFG+S+ L E T ++
Sbjct: 124 GIASGMRYL----AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSL 179
Query: 338 A---TIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH 390
I + APE I ++ D +SYGI++ E S GE NQ +
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS-------FGERPYWDMSNQDV-- 230
Query: 391 KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445
N + +++ DC + L LDC + + R + L K+
Sbjct: 231 -------INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 199 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 242
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 243 SLHDLMCQCWRKDPEER 259
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 241 LDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 305
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 365 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 408
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 409 SLHDLMCQCWRKEPEER 425
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 241 LDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 305
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 365 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 408
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 409 SLHDLMCQCWRKEPEER 425
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 199 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 242
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 243 SLHDLMCQCWRKDPEER 259
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 121/265 (45%), Gaps = 32/265 (12%)
Query: 179 NLLGIGSFGSVYKGTL----SDGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIK 233
++G G G V G L VAIK ER F SE ++ H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH-YGHAL 292
+ + +V E+M NGSL+ +L +H+ I++ + ++ VG + YL G+
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY-- 172
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLL-GEGDDSLIQTKTMATIGYMAPEGIV-- 349
+H DL N+L+D N+V VSDFG+S++L + D + T I + APE I
Sbjct: 173 ---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 350 --STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSF 407
S+ DV+S+G+++ E + GE + N+ +V+ S V +
Sbjct: 230 TFSSASDVWSFGVVMWEVLA-------YGERPYWNMTNR-------DVISS--VEEGYRL 273
Query: 408 SAKMDCLLRIMNLALDCCMESPDER 432
A M C + L LDC + +R
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQR 298
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 121/265 (45%), Gaps = 32/265 (12%)
Query: 179 NLLGIGSFGSVYKGTL----SDGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIK 233
++G G G V G L VAIK ER F SE ++ H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH-YGHAL 292
+ + +V E+M NGSL+ +L +H+ I++ + ++ VG + YL G+
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY-- 172
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLL-GEGDDSLIQTKTMATIGYMAPEGIV-- 349
+H DL N+L+D N+V VSDFG+S++L + D + T I + APE I
Sbjct: 173 ---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 350 --STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSF 407
S+ DV+S+G+++ E + GE + N+ +V+ S V +
Sbjct: 230 TFSSASDVWSFGVVMWEVLA-------YGERPYWNMTNR-------DVISS--VEEGYRL 273
Query: 408 SAKMDCLLRIMNLALDCCMESPDER 432
A M C + L LDC + +R
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQR 298
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 241 LDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN----YVHRD 136
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI-EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 196 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 239
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 240 SLHDLMCQCWRKEPEER 256
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 241 LDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN----YVHRD 136
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 196 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 239
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 240 SLHDLMCQCWRKEPEER 256
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 126/287 (43%), Gaps = 37/287 (12%)
Query: 162 RISYLDIQRATNEFDECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ER 211
R S + E D N+ +G G FG V G L +VAIK + E+
Sbjct: 17 RGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 76
Query: 212 TFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILE 271
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++
Sbjct: 77 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 136
Query: 272 RLNIMIDVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330
+ ++ + ++YL G+ +H DL NIL++ N+V VSDFG+S++L + ++
Sbjct: 137 LVGMLRGIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 191
Query: 331 LIQTK-TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVN 385
T+ I + +PE I ++ DV+SYGI+L E S GE N
Sbjct: 192 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSN 244
Query: 386 QSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
Q + + E + MDC + L LDC + + R
Sbjct: 245 QDVIKAVDE---------GYRLPPPMDCPAALYQLMLDCWQKDRNNR 282
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V+E+M G L +L +L + + +++ + + Y+ + +H D
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 199 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 242
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 243 SLHDLMCQCWRKDPEER 259
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 180 LLGIGSFGSVYKGTLSDGTN----VAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKI 234
++G+G FG V G L VAIK ++ F SE ++ H N+I +
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ ++ E+M NGSL+ +L ++ +++ + ++ +G ++YL A
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA--- 152
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-TMATIGYMAPEGIV---- 349
+H DL NIL++ N+V VSDFG+S++L + ++ T+ I + APE I
Sbjct: 153 -VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 350 STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSA 409
++ DV+SYGI++ E S GE NQ + + E +
Sbjct: 212 TSASDVWSYGIVMWEVMS-------YGERPYWDMSNQDVIKAIEE---------GYRLPP 255
Query: 410 KMDCLLRIMNLALDCCMESPDER 432
MDC + + L LDC + +R
Sbjct: 256 PMDCPIALHQLMLDCWQKERSDR 278
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 41/289 (14%)
Query: 164 SYLDIQRATNEF----DECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL- 209
+Y D + +EF D N+ +G G FG V G L +VAIK +
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 210 ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDI 269
E+ F E ++ H N+I++ + +V E+M NGSL+ +L H+ +
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 144
Query: 270 LERLNIMIDVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
++ + ++ + ++YL G+ +H DL NIL++ N+V VSDFG+S++L +
Sbjct: 145 IQLVGMLRGIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 199
Query: 329 DSLIQTK-TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHW 383
++ T+ I + +PE I ++ DV+SYGI+L E S GE
Sbjct: 200 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEM 252
Query: 384 VNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
NQ + + VD + MDC + L LDC + + R
Sbjct: 253 SNQD----VIKAVDEG-----YRLPPPMDCPAALYQLMLDCWQKDRNNR 292
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 140 LAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 199 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 242
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 243 SLHDLMCQCWRKDPEER 259
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 41/289 (14%)
Query: 164 SYLDIQRATNEF----DECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL- 209
+Y D + +EF D N+ +G G FG V G L +VAIK +
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 210 ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDI 269
E+ F E ++ H N+I++ + +V E+M NGSL+ +L H+ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 270 LERLNIMIDVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
++ + ++ + ++YL G+ +H DL NIL++ N+V VSDFG+S++L +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 329 DSLIQTK-TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHW 383
++ T+ I + +PE I ++ DV+SYGI+L E S GE
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEM 254
Query: 384 VNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
NQ + + VD + MDC + L LDC + + R
Sbjct: 255 SNQD----VIKAVDEG-----YRLPPPMDCPAALYQLMLDCWQKDRNNR 294
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 41/289 (14%)
Query: 164 SYLDIQRATNEF----DECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL- 209
+Y D + +EF D N+ +G G FG V G L +VAIK +
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 210 ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDI 269
E+ F E ++ H N+I++ + +V E+M NGSL+ +L H+ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 270 LERLNIMIDVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
++ + ++ + ++YL G+ +H DL NIL++ N+V VSDFG+S++L +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 329 DSLIQTK-TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHW 383
++ T+ I + +PE I ++ DV+SYGI+L E S GE
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEM 254
Query: 384 VNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
NQ + + VD + MDC + L LDC + + R
Sbjct: 255 SNQD----VIKAVDEG-----YRLPPPMDCPAALYQLMLDCWQKDRNNR 294
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 241 LDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L +L + + +++ + + Y+ + +H D
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 305
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 365 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 408
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 409 SLHDLMCQCWRKEPEER 425
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 35/280 (12%)
Query: 168 IQRATNEFDECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFN 217
+ E D N+ +G G FG V G L +VAIK + E+ F
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 94
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-T 336
+ ++YL + +H DL NIL++ N+V VSDFG+S++L + ++ T+
Sbjct: 155 GIASGMKYL----SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKL 392
I + +PE I ++ DV+SYGI+L E S GE NQ +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQD----V 259
Query: 393 AEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
+ VD + MDC + L LDC + + R
Sbjct: 260 IKAVDEG-----YRLPPPMDCPAALYQLMLDCWQKDRNNR 294
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 168 IQRATNEFDECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFN 217
+ E D N+ +G G FG V G L +VAIK + E+ F
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 94
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 278 DVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK- 335
+ ++YL G+ +H DL NIL++ N+V VSDFG+S++L + ++ T+
Sbjct: 155 GIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
I + +PE I ++ DV+SYGI+L E S GE NQ
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQD---- 258
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
+ + VD + MDC + L LDC + + R
Sbjct: 259 VIKAVDEG-----YRLPPPMDCPAALYQLMLDCWQKDRNNR 294
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 168 IQRATNEFDECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFN 217
+ E D N+ +G G FG V G L +VAIK + E+ F
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 94
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 278 DVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK- 335
+ ++YL G+ +H DL NIL++ N+V VSDFG+S++L + ++ T+
Sbjct: 155 GIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
I + +PE I ++ DV+SYGI+L E S GE NQ
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQD---- 258
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
+ + VD + MDC + L LDC + + R
Sbjct: 259 VIKAVDEG-----YRLPPPMDCPAALYQLMLDCWQKDRNNR 294
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 37/281 (13%)
Query: 168 IQRATNEFDECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFN 217
+ E D N+ +G G FG V G L +VAIK + E+ F
Sbjct: 6 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 65
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + ++
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 125
Query: 278 DVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK- 335
+ ++YL G+ +H DL NIL++ N+V VSDFG+S++L + ++ T+
Sbjct: 126 GIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
I + +PE I ++ DV+SYGI+L E S GE NQ +
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKA 233
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
+ E + MDC + L LDC + + R
Sbjct: 234 VDE---------GYRLPPPMDCPAALYQLMLDCWQKDRNNR 265
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++EF+P GSL ++L H +D ++ L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH DL NIL++ + DFG++K+L + + ++
Sbjct: 125 QICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + +F E +V++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 241 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M G L +L +L + + +++ + + Y+ + +H D
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ EN+V V+DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + VN+ EV+D V R + +C
Sbjct: 199 WSFGILLTELTTK-------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECPE 242
Query: 416 RIMNLALDCCMESPDER 432
+ +L C + P+ER
Sbjct: 243 SLHDLMCQCWRKDPEER 259
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 35/280 (12%)
Query: 168 IQRATNEFDECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFN 217
+ E D N+ +G G FG V G L +VAIK + E+ F
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 94
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E ++ H N+I++ + +V E M NGSL+ +L H+ +++ + ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-T 336
+ ++YL A +H DL NIL++ N+V VSDFG+S++L + ++ T+
Sbjct: 155 GIASGMKYLSDMGA----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKL 392
I + +PE I ++ DV+SYGI+L E S GE NQ +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQD----V 259
Query: 393 AEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
+ VD + MDC + L LDC + + R
Sbjct: 260 IKAVDEG-----YRLPPPMDCPAALYQLMLDCWQKDRNNR 294
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 168 IQRATNEFDECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFN 217
+ E D N+ +G G FG V G L +VAIK + E+ F
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 94
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 278 DVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK- 335
+ ++YL G+ +H DL NIL++ N+V VSDFG++++L + ++ T+
Sbjct: 155 GIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
I + +PE I ++ DV+SYGI+L E S GE NQ
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQD---- 258
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
+ + VD + MDC + L LDC + + R
Sbjct: 259 VIKAVDEG-----YRLPPPMDCPAALYQLMLDCWQKDRNNR 294
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 180 LLGIGSFGSVYKGTLSDGTN----VAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKI 234
++G+G FG V G L VAIK ++ F SE ++ H N+I +
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ ++ E+M NGSL+ +L ++ +++ + ++ +G ++YL +
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL----SDMS 136
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-TMATIGYMAPEGIV---- 349
+H DL NIL++ N+V VSDFG+S++L + ++ T+ I + APE I
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 350 STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSA 409
++ DV+SYGI++ E S GE NQ + + E +
Sbjct: 197 TSASDVWSYGIVMWEVMS-------YGERPYWDMSNQDVIKAIEE---------GYRLPP 240
Query: 410 KMDCLLRIMNLALDCCMESPDER 432
MDC + + L LDC + +R
Sbjct: 241 PMDCPIALHQLMLDCWQKERSDR 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 41/289 (14%)
Query: 164 SYLDIQRATNEF----DECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL- 209
+Y D + +EF D N+ +G G FG V G L +VAIK +
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 210 ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDI 269
E+ F E ++ H N+I++ + +V E M NGSL+ +L H+ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 270 LERLNIMIDVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
++ + ++ + ++YL G+ +H DL NIL++ N+V VSDFG+S++L +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 329 DSLIQTK-TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHW 383
++ T+ I + +PE I ++ DV+SYGI+L E S GE
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEM 254
Query: 384 VNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
NQ + + VD + MDC + L LDC + + R
Sbjct: 255 SNQD----VIKAVDEG-----YRLPPPMDCPAALYQLMLDCWQKDRNNR 294
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 180 LLGIGSFGSVYKGTLSDGTN----VAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKI 234
++G+G FG V G L VAIK ++ F SE ++ H N+I +
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ ++ E+M NGSL+ +L ++ +++ + ++ +G ++YL +
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL----SDMS 130
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-TMATIGYMAPEGIV---- 349
+H DL NIL++ N+V VSDFG+S++L + ++ T+ I + APE I
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 350 STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSA 409
++ DV+SYGI++ E S GE NQ + + E +
Sbjct: 191 TSASDVWSYGIVMWEVMS-------YGERPYWDMSNQDVIKAIEE---------GYRLPP 234
Query: 410 KMDCLLRIMNLALDCCMESPDER 432
MDC + + L LDC + +R
Sbjct: 235 PMDCPIALHQLMLDCWQKERSDR 257
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 37/281 (13%)
Query: 168 IQRATNEFDECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFN 217
+ E D N+ +G G FG V G L +VAIK + E+ F
Sbjct: 35 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 94
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + ++
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 278 DVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK- 335
+ ++YL G+ +H DL NIL++ N+V VSDFG+ ++L + ++ T+
Sbjct: 155 GIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
I + +PE I ++ DV+SYGI+L E S GE NQ
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQD---- 258
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
+ + VD + MDC + L LDC + + R
Sbjct: 259 VIKAVDEG-----YRLPPPMDCPAALYQLMLDCWQKDRNNR 294
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 28/261 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G GSFG+VYKG +VA+K+ N+ + +F +E VLR RH N++ + G
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 76
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
S A+V ++ SL L++ ++ + ++I ++YLH IIH
Sbjct: 77 STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHR 132
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VST 351
DLK +NI L E+ + DFG++ + S + +I +MAPE I S
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 352 KCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKM 411
+ DVY++GI+L E + + P +++ ++ E+V + + S +
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRD-----------QIIEMVGRGSLSPDLS-KVRS 240
Query: 412 DCLLRIMNLALDCCMESPDER 432
+C R+ L +C + DER
Sbjct: 241 NCPKRMKRLMAECLKKKRDER 261
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 123/281 (43%), Gaps = 37/281 (13%)
Query: 168 IQRATNEFDECNL-----LGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFN 217
+ E D N+ +G G FG V G L +VAIK + E+ F
Sbjct: 6 VHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL 65
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E ++ H N+I++ + +V E M NGSL+ +L H+ +++ + ++
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 125
Query: 278 DVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK- 335
+ ++YL G+ +H DL NIL++ N+V VSDFG+S++L + ++ T+
Sbjct: 126 GIASGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
I + +PE I ++ DV+SYGI+L E S GE NQ +
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKA 233
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
+ E + MDC + L LDC + + R
Sbjct: 234 VDE---------GYRLPPPMDCPAALYQLMLDCWQKDRNNR 265
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 120/268 (44%), Gaps = 36/268 (13%)
Query: 179 NLLGIGSFGSVYKGTLS-DGTN---VAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIK 233
++G G FG V G L G VAIK E+ F SE ++ H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ + ++ EFM NGSL+ +L ++ +++ + ++ + ++YL A
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL----ADM 154
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG-----YMAPEGI 348
+H DL NIL++ N+V VSDFG+S+ L DD+ T T A G + APE I
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 349 ----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404
++ DV+SYGI++ E S GE NQ + N + ++
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMS-------YGERPYWDMTNQDV---------INAIEQD 256
Query: 405 HSFSAKMDCLLRIMNLALDCCMESPDER 432
+ MDC + L LDC + + R
Sbjct: 257 YRLPPPMDCPSALHQLMLDCWQKDRNHR 284
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 44/295 (14%)
Query: 171 ATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNL-------QLERTFVSFNSECEV 222
A NE + +G G FG V+KG L D + VAIK L ++ F F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLA 282
+ N+ H N++K+ N +V+EF+P G L L + + +L +M+D+ L
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 283 LEYLHYGHALAPIIHCDLKPSNIL---LDEN--MVAHVSDFGISKLLGEGDDSLIQTKTM 337
+EY+ + PI+H DL+ NI LDEN + A V+DFG+S+ L +
Sbjct: 135 IEYMQ--NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL-----L 187
Query: 338 ATIGYMAPEGI------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
+MAPE I + K D YS+ ++L + + P ++ +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE---------------YS 232
Query: 392 LAEVVDSNLVRREH-SFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445
++ N++R E + DC R+ N+ C P +R H + +L ++
Sbjct: 233 YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH DL NIL++ + DFG++K+L + + ++
Sbjct: 121 QICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 177 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH DL NIL++ + DFG++K+L + + ++
Sbjct: 125 QICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 65
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH DL NIL++ + DFG++K+L + + ++
Sbjct: 126 QICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 182 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH DL NIL++ + DFG++K+L + + ++
Sbjct: 122 QICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 68
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH DL NIL++ + DFG++K+L + + ++
Sbjct: 129 QICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 185 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 8 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 67
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH DL NIL++ + DFG++K+L + + ++
Sbjct: 128 QICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 184 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 16/224 (7%)
Query: 161 RRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNS 218
RR S D + + +G GSFG+VYKG +VA+K+ N+ + +F +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 81
Query: 219 ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
E VLR RH N++ + G S A+V ++ SL L+ ++++ ++I
Sbjct: 82 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
++YLH IIH DLK +NI L E++ + DFG++ + S +
Sbjct: 141 TAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 196
Query: 339 TIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDL 375
+I +MAPE I S + DVY++GI+L E + + P +++
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 66
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH DL NIL++ + DFG++K+L + + ++
Sbjct: 127 QICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 183 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 41/289 (14%)
Query: 164 SYLDIQRATNEFDE-----C----NLLGIGSFGSVYKGTLS-DGTN---VAIKIFNLQL- 209
+Y D +A +EF + C ++G G FG V G L G VAIK +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 210 ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDI 269
E+ F E ++ H N+I + + +V E+M NGSL+ +L ++ +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 270 LERLNIMIDVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
++ + ++ + ++YL G+ +H DL NIL++ N+V VSDFG+S++L +
Sbjct: 124 IQLVGMLRGISAGMKYLSDMGY-----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 329 DSLIQTK-TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHW 383
++ T+ I + APE I ++ DV+SYGI++ E S GE
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS-------YGERPYWEM 231
Query: 384 VNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
NQ + + E + + MDC + L LDC + + R
Sbjct: 232 TNQDVIKAVEE---------GYRLPSPMDCPAALYQLMLDCWQKERNSR 271
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++E++P GSL +L +H +D ++ L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS 124
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH DL NIL++ + DFG++K+L + + ++
Sbjct: 125 QICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 16/224 (7%)
Query: 161 RRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNS 218
RR S D + + +G GSFG+VYKG +VA+K+ N+ + +F +
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 80
Query: 219 ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
E VLR RH N++ + G S A+V ++ SL L+ ++++ ++I
Sbjct: 81 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
++YLH IIH DLK +NI L E++ + DFG++ + S +
Sbjct: 140 TAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 195
Query: 339 TIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDL 375
+I +MAPE I S + DVY++GI+L E + + P +++
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G GSFG+VYKG +VA+K+ N+ + +F +E VLR RH N++ + G
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 88
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
S A+V ++ SL L++ ++ + ++I ++YLH IIH
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHR 144
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VST 351
DLK +NI L E+ + DFG++ S + +I +MAPE I S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 352 KCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKM 411
+ DVY++GI+L E + + P +++ ++ E+V + + S +
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRD-----------QIIEMVGRGSLSPDLS-KVRS 252
Query: 412 DCLLRIMNLALDCCMESPDER 432
+C R+ L +C + DER
Sbjct: 253 NCPKRMKRLMAECLKKKRDER 273
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 92
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH DL NIL++ + DFG++K+L + + ++
Sbjct: 153 QICKGMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 44/295 (14%)
Query: 171 ATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNL-------QLERTFVSFNSECEV 222
A NE + +G G FG V+KG L D + VAIK L ++ F F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLA 282
+ N+ H N++K+ N +V+EF+P G L L + + +L +M+D+ L
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 283 LEYLHYGHALAPIIHCDLKPSNIL---LDEN--MVAHVSDFGISKLLGEGDDSLIQTKTM 337
+EY+ + PI+H DL+ NI LDEN + A V+DFG S+ L +
Sbjct: 135 IEYMQ--NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL-----L 187
Query: 338 ATIGYMAPEGI------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
+MAPE I + K D YS+ ++L + + P ++ +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE---------------YS 232
Query: 392 LAEVVDSNLVRREH-SFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445
++ N++R E + DC R+ N+ C P +R H + +L ++
Sbjct: 233 YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 28/261 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G GSFG+VYKG +VA+K+ N+ + +F +E VLR RH N++ + G
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 88
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
S A+V ++ SL L++ ++ + ++I ++YLH IIH
Sbjct: 89 STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHR 144
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VST 351
DLK +NI L E+ + DFG++ S + +I +MAPE I S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 352 KCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKM 411
+ DVY++GI+L E + + P +++ ++ E+V + + S +
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRD-----------QIIEMVGRGSLSPDLS-KVRS 252
Query: 412 DCLLRIMNLALDCCMESPDER 432
+C R+ L +C + DER
Sbjct: 253 NCPKRMKRLMAECLKKKRDER 273
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G GSFG+VYKG +VA+K+ N+ + +F +E VLR RH N++ + G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 72
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
S A+V ++ SL L+ ++++ ++I ++YLH IIH
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 128
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VST 351
DLK +NI L E++ + DFG++ + S + +I +MAPE I S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 352 KCDVYSYGILLLETFSRKKPTNDL 375
+ DVY++GI+L E + + P +++
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G GSFG+VYKG +VA+K+ N+ + +F +E VLR RH N++ + G
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 74
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
S A+V ++ SL L+ ++++ ++I ++YLH IIH
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 130
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VST 351
DLK +NI L E++ + DFG++ + S + +I +MAPE I S
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 352 KCDVYSYGILLLETFSRKKPTNDL 375
+ DVY++GI+L E + + P +++
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNI 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G GSFG+VYKG +VA+K+ N+ + +F +E VLR RH N++ + G
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 77
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
S A+V ++ SL L+ ++++ ++I ++YLH IIH
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 133
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VST 351
DLK +NI L E++ + DFG++ + S + +I +MAPE I S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 352 KCDVYSYGILLLETFSRKKPTNDL 375
+ DVY++GI+L E + + P +++
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G GSFG+VYKG +VA+K+ N+ + +F +E VLR RH N++ + G
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 77
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
S A+V ++ SL L+ ++++ ++I ++YLH IIH
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 133
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VST 351
DLK +NI L E++ + DFG++ + S + +I +MAPE I S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 352 KCDVYSYGILLLETFSRKKPTNDL 375
+ DVY++GI+L E + + P +++
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 174 EFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVL 223
+F+E +L LG G+FGSV L D T VA+K E F E E+L
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 63
Query: 224 RNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
++++H N++K C + + L++E++P GSL +L H +D ++ L +
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKTMATI 340
+EYL IH DL NIL++ + DFG++K+L + + ++ + I
Sbjct: 124 GMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 341 GYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ APE + +K DV+S+G++L E F+
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G GSFG+VYKG +VA+K+ N+ + +F +E VLR RH N++ + G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 72
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
S A+V ++ SL L+ ++++ ++I ++YLH IIH
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 128
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VST 351
DLK +NI L E++ + DFG++ + S + +I +MAPE I S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 352 KCDVYSYGILLLETFSRKKPTNDL 375
+ DVY++GI+L E + + P +++
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 174 EFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVL 223
+F+E +L LG G+FGSV L D T VA+K E F E E+L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 224 RNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
++++H N++K C + + L++E++P GSL +L H +D ++ L +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKTMATI 340
+EYL IH DL NIL++ + DFG++K+L + + ++ + I
Sbjct: 126 GMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 341 GYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ APE + +K DV+S+G++L E F+
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 161 RRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNS 218
RR S D + + +G GSFG+VYKG +VA+K+ N+ + +F +
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 73
Query: 219 ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
E VLR RH N++ + G S A+V ++ SL L+ ++++ ++I
Sbjct: 74 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
++YLH IIH DLK +NI L E++ + DFG++ S +
Sbjct: 133 TAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 188
Query: 339 TIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDL 375
+I +MAPE I S + DVY++GI+L E + + P +++
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 161 RRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNS 218
RR S D + + +G GSFG+VYKG +VA+K+ N+ + +F +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 81
Query: 219 ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
E VLR RH N++ + G S A+V ++ SL L+ ++++ ++I
Sbjct: 82 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
++YLH IIH DLK +NI L E++ + DFG++ S +
Sbjct: 141 TAQGMDYLH----AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 196
Query: 339 TIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDL 375
+I +MAPE I S + DVY++GI+L E + + P +++
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 174 EFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVL 223
+F+E +L LG G+FGSV L D T VA+K E F E E+L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 224 RNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
++++H N++K C + + L++E++P GSL +L H +D ++ L +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKTMATI 340
+EYL IH DL NIL++ + DFG++K+L + + ++ + I
Sbjct: 126 GMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 341 GYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ APE + +K DV+S+G++L E F+
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 174 EFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVL 223
+F+E +L LG G+FGSV L D T VA+K E F E E+L
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 224 RNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
++++H N++K C + + L++E++P GSL +L H +D ++ L +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKTMATI 340
+EYL IH DL NIL++ + DFG++K+L + + ++ + I
Sbjct: 144 GMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 341 GYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ APE + +K DV+S+G++L E F+
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 174 EFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVL 223
+F+E +L LG G+FGSV L D T VA+K E F E E+L
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 224 RNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
++++H N++K C + + L++E++P GSL +L H +D ++ L +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKTMATI 340
+EYL IH DL NIL++ + DFG++K+L + + ++ + I
Sbjct: 144 GMEYL----GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 341 GYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ APE + +K DV+S+G++L E F+
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 131/295 (44%), Gaps = 44/295 (14%)
Query: 171 ATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNL-------QLERTFVSFNSECEV 222
A NE + +G G FG V+KG L D + VAIK L ++ F F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLA 282
+ N+ H N++K+ N +V+EF+P G L L + + +L +M+D+ L
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 283 LEYLHYGHALAPIIHCDLKPSNIL---LDEN--MVAHVSDFGISKLLGEGDDSLIQTKTM 337
+EY+ + PI+H DL+ NI LDEN + A V+DF +S+ L +
Sbjct: 135 IEYMQ--NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL-----L 187
Query: 338 ATIGYMAPEGI------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
+MAPE I + K D YS+ ++L + + P ++ +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE---------------YS 232
Query: 392 LAEVVDSNLVRREH-SFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445
++ N++R E + DC R+ N+ C P +R H + +L ++
Sbjct: 233 YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 170 RATNEFDECNL-----LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSE 219
R +F+E +L LG G+FGSV L D T VA+K E F E
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
+ +EYL IH +L NIL++ + DFG++K+L + + ++
Sbjct: 123 QICKGMEYL----GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG 178
Query: 337 MATIGYMAPEGIVSTK----CDVYSYGILLLETFS 367
+ I + APE + +K DV+S+G++L E F+
Sbjct: 179 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 16/204 (7%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G GSFG+VYKG +VA+K+ N+ + +F +E VLR RH N++ + G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 72
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
S A+V ++ SL L+ ++++ ++I ++YLH IIH
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKSIIHR 128
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VST 351
DLK +NI L E++ + DFG++ S + +I +MAPE I S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 352 KCDVYSYGILLLETFSRKKPTNDL 375
+ DVY++GI+L E + + P +++
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 47/282 (16%)
Query: 181 LGIGSFGSVYKGTL------SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKI 234
LG G+FG V+ D VA+K + F+ E E+L N++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDIL------------ERLNIMIDVGLA 282
C D +V E+M +G L K+L +H ++ + L+I +
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 283 LEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGY 342
+ YL H +H DL N L+ EN++ + DFG+S+ + D + TM I +
Sbjct: 141 MVYLASQH----FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 343 MAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
M PE I+ +T+ DV+S G++L E F+ K + W S + +
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGK----------QPWYQLSNNEVIECITQG 246
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDER-----IHT 435
+++R + C + L L C P R IHT
Sbjct: 247 RVLQRPRT------CPQEVYELMLGCWQREPHMRKNIKGIHT 282
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 46/285 (16%)
Query: 180 LLGIGSFGSVYKGTLSDGTNVAIKIF----NLQLERTFVSFNSECEVLRNVRHRNLIKIL 235
++GIG FG VY+ G VA+K + + +T + E ++ ++H N+I +
Sbjct: 14 IIGIGGFGKVYR-AFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 236 SGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C LV+EF G L + L DIL +N + + + YLH A+ PI
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLH-DEAIVPI 129
Query: 296 IHCDLKPSNILLDE--------NMVAHVSDFGISKLLGEGDDSLIQTKTMATIG---YMA 344
IH DLK SNIL+ + N + ++DFG+++ +T M+ G +MA
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-------EWHRTTKMSAAGAYAWMA 182
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400
PE I S DV+SYG+LL E + + P + +++ + V +KLA + S
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM---NKLALPIPST- 238
Query: 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445
C L DC P R TN +L I
Sbjct: 239 ------------CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 119/268 (44%), Gaps = 36/268 (13%)
Query: 179 NLLGIGSFGSVYKGTLS-DGTN---VAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIK 233
++G G FG V G L G VAIK E+ F SE ++ H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ + ++ EFM NGSL+ +L ++ +++ + ++ + ++YL A
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL----ADM 128
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG-----YMAPEGI 348
+H L NIL++ N+V VSDFG+S+ L DD+ T T A G + APE I
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 349 ----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404
++ DV+SYGI++ E S GE NQ + N + ++
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMS-------YGERPYWDMTNQDV---------INAIEQD 230
Query: 405 HSFSAKMDCLLRIMNLALDCCMESPDER 432
+ MDC + L LDC + + R
Sbjct: 231 YRLPPPMDCPSALHQLMLDCWQKDRNHR 258
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 45/278 (16%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKI 234
LG G+FG V+ D VA+K F E E+L N++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDIL---------------ERLNIMIDV 279
C + D +V E+M +G L K+L +H IL + L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 280 GLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
+ YL H +H DL N L+ N++ + DFG+S+ + D + TM
Sbjct: 143 ASGMVYLASQH----FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 340 IGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEV 395
I +M PE I+ +T+ DV+S+G++L E F+ K + W S + +
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK----------QPWFQLSNTEVIECI 248
Query: 396 VDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERI 433
++ R C + ++ L C P +R+
Sbjct: 249 TQGRVLERPRV------CPKEVYDVMLGCWQREPQQRL 280
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 181 LGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTF-VSFNSECEVLRNVRHRNLIKILSGC 238
+G G+FG V+ G L +D T VA+K L F E +L+ H N+++++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
+ +V+E + G +L + L + L ++ D +EYL IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC----IHR 237
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCD 354
DL N L+ E V +SDFG+S+ +G + + + APE G S++ D
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 355 VYSYGILLLETFS 367
V+S+GILL ETFS
Sbjct: 298 VWSFGILLWETFS 310
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
+G G FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
LV EFM +G L +L + L + +DV + YL A +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ASVIHRDL 129
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVY 356
N L+ EN V VSDFG+++ + + D T T + + +PE S+K DV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 357 SYGILLLETFSRKK 370
S+G+L+ E FS K
Sbjct: 189 SFGVLMWEVFSEGK 202
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 181 LGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTF-VSFNSECEVLRNVRHRNLIKILSGC 238
+G G+FG V+ G L +D T VA+K L F E +L+ H N+++++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
+ +V+E + G +L + L + L ++ D +EYL IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC----IHR 237
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCD 354
DL N L+ E V +SDFG+S+ +G + + + APE G S++ D
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 355 VYSYGILLLETFS 367
V+S+GILL ETFS
Sbjct: 298 VWSFGILLWETFS 310
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ GT + T VAIK + SF E ++++ ++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 241 LDFKALVLEFMPNGSLEKWLY-SHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+V E+M GSL +L L + +++ V + Y+ + IH D
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN----YIHRD 130
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ ++ ++DFG+++L+ + + + Q I + APE G + K DV
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 189
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S+GILL E ++ G + N+ EV++ V R + DC +
Sbjct: 190 WSFGILLTELVTK-------GRVPYPGMNNR-------EVLEQ--VERGYRMPCPQDCPI 233
Query: 416 RIMNLALDCCMESPDER 432
+ L + C + P+ER
Sbjct: 234 SLHELMIHCWKKDPEER 250
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
+G G FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
LV EFM +G L +L + L + +DV + YL A +IH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 132
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVY 356
N L+ EN V VSDFG+++ + + D T T + + +PE S+K DV+
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 357 SYGILLLETFSRKK 370
S+G+L+ E FS K
Sbjct: 192 SFGVLMWEVFSEGK 205
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
+G G FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
LV EFM +G L +L + L + +DV + YL A +IH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 127
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVY 356
N L+ EN V VSDFG+++ + + D T T + + +PE S+K DV+
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 357 SYGILLLETFSRKK 370
S+G+L+ E FS K
Sbjct: 187 SFGVLMWEVFSEGK 200
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 26/256 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V G +VAIK+ + + F E +V+ N+ H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
++ E+M NG L +L + + L + DV A+EYL L H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL----HRDL 146
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----STKCDVY 356
N L+++ V VSDFG+S+ + + D+ + + + PE ++ S+K D++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLD-DEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 357 SYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLR 416
++G+L+ E +S LG+M + + N +A+ + + R H S K
Sbjct: 206 AFGVLMWEIYS-------LGKMPYERFTNSETAEHIAQGLR---LYRPHLASEK------ 249
Query: 417 IMNLALDCCMESPDER 432
+ + C E DER
Sbjct: 250 VYTIMYSCWHEKADER 265
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
+G G FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
LV EFM +G L +L + L + +DV + YL A +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 129
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVY 356
N L+ EN V VSDFG+++ + + D T T + + +PE S+K DV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 357 SYGILLLETFSRKK 370
S+G+L+ E FS K
Sbjct: 189 SFGVLMWEVFSEGK 202
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 27/263 (10%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLI 232
E + ++G G+FG V K +VAIK + ER +F E L V H N++
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERK--AFIVELRQLSRVNHPNIV 65
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLYSHNY--FLDILERLNIMIDVGLALEYLHYGH 290
K+ C L+ LV+E+ GSL L+ + ++ + + YLH
Sbjct: 66 KLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 291 ALAPIIHCDLKPSNILL-DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI- 348
A +IH DLKP N+LL V + DFG + D T + +MAPE
Sbjct: 124 PKA-LIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFE 177
Query: 349 ---VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLK-HWV--NQSLP---HKLAEVVDSN 399
S KCDV+S+GI+L E +R+KP +++G + + W N + P L + ++S
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 237
Query: 400 LVR---REHSFSAKMDCLLRIMN 419
+ R ++ S M+ +++IM
Sbjct: 238 MTRCWSKDPSQRPSMEEIVKIMT 260
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
+G G FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
LV EFM +G L +L + L + +DV + YL A +IH DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 149
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVY 356
N L+ EN V VSDFG+++ + + D T T + + +PE S+K DV+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 357 SYGILLLETFSRKK 370
S+G+L+ E FS K
Sbjct: 209 SFGVLMWEVFSEGK 222
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 180 LLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
++G G+FG V K +VAIK + ER +F E L V H N++K+ C
Sbjct: 15 VVGRGAFGVVCKAKWR-AKDVAIKQIESESERK--AFIVELRQLSRVNHPNIVKLYGAC- 70
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNY--FLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
L+ LV+E+ GSL L+ + ++ + + YLH A +IH
Sbjct: 71 -LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIH 128
Query: 298 CDLKPSNILL-DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTK 352
DLKP N+LL V + DFG + D T + +MAPE S K
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 353 CDVYSYGILLLETFSRKKPTNDLGEMSLK 381
CDV+S+GI+L E +R+KP +++G + +
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGGPAFR 212
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
+G G FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
LV EFM +G L +L + L + +DV + YL A +IH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 130
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVY 356
N L+ EN V VSDFG+++ + + D T T + + +PE S+K DV+
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 357 SYGILLLETFSRKK 370
S+G+L+ E FS K
Sbjct: 190 SFGVLMWEVFSEGK 203
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 26/256 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V G +VAIK+ + + F E +V+ N+ H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
++ E+M NG L +L + + L + DV A+EYL +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ----FLHRDL 146
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----STKCDVY 356
N L+++ V VSDFG+S+ + + D+ + + + PE ++ S+K D++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 357 SYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLR 416
++G+L+ E +S LG+M + + N +A+ + + R H S K
Sbjct: 206 AFGVLMWEIYS-------LGKMPYERFTNSETAEHIAQGLR---LYRPHLASEK------ 249
Query: 417 IMNLALDCCMESPDER 432
+ + C E DER
Sbjct: 250 VYTIMYSCWHEKADER 265
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 26/256 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V G +VAIK+ + + F E +V+ N+ H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
++ E+M NG L +L + + L + DV A+EYL L H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL----HRDL 131
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----STKCDVY 356
N L+++ V VSDFG+S+ + + D+ + + + PE ++ S+K D++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 357 SYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLR 416
++G+L+ E +S LG+M + + N +A+ + + R H S K
Sbjct: 191 AFGVLMWEIYS-------LGKMPYERFTNSETAEHIAQGLR---LYRPHLASEK------ 234
Query: 417 IMNLALDCCMESPDER 432
+ + C E DER
Sbjct: 235 VYTIMYSCWHEKADER 250
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 26/256 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V G +VAIK+ + + F E +V+ N+ H L+++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
++ E+M NG L +L + + L + DV A+EYL L H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL----HRDL 126
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----STKCDVY 356
N L+++ V VSDFG+S+ + + D+ + + + PE ++ S+K D++
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 357 SYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLR 416
++G+L+ E +S LG+M + + N +A+ + + R H S K
Sbjct: 186 AFGVLMWEIYS-------LGKMPYERFTNSETAEHIAQGLR---LYRPHLASEK------ 229
Query: 417 IMNLALDCCMESPDER 432
+ + C E DER
Sbjct: 230 VYTIMYSCWHEKADER 245
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 26/256 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V G +VAIK+ + + F E +V+ N+ H L+++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
++ E+M NG L +L + + L + DV A+EYL L H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL----HRDL 130
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----STKCDVY 356
N L+++ V VSDFG+S+ + + D+ + + + PE ++ S+K D++
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 357 SYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLR 416
++G+L+ E +S LG+M + + N +A+ + + R H S K
Sbjct: 190 AFGVLMWEIYS-------LGKMPYERFTNSETAEHIAQGLR---LYRPHLASEK------ 233
Query: 417 IMNLALDCCMESPDER 432
+ + C E DER
Sbjct: 234 VYTIMYSCWHEKADER 249
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 28/257 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V G +VAIK+ + + F E +V+ N+ H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
++ E+M NG L +L + + L + DV A+EYL L H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL----HRDL 131
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-TMATIGYMAPEGIV----STKCDV 355
N L+++ V VSDFG+S+ + DD ++ + + + PE ++ S+K D+
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+++G+L+ E +S LG+M + + N +A+ + + R H S K
Sbjct: 190 WAFGVLMWEIYS-------LGKMPYERFTNSETAEHIAQGLR---LYRPHLASEK----- 234
Query: 416 RIMNLALDCCMESPDER 432
+ + C E DER
Sbjct: 235 -VYTIMYSCWHEKADER 250
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 44/289 (15%)
Query: 181 LGIGSFGSVYKGTL------SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKI 234
LG G+FG V+ D VA+K E F E E+L ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDIL--------------ERLNIMIDVG 280
C+ +V E+M +G L ++L SH +L + L + V
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 281 LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATI 340
+ YL H +H DL N L+ + +V + DFG+S+ + D + +TM I
Sbjct: 146 AGMVYLAGLH----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 341 GYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396
+M PE I+ +T+ DV+S+G++L E F+ K + W S + +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK----------QPWYQLSNTEAIDCIT 251
Query: 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445
+ R + ++ ++R C P +R + A+L+ +
Sbjct: 252 QGRELERPRACPPEVYAIMR------GCWQREPQQRHSIKDVHARLQAL 294
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 44/289 (15%)
Query: 181 LGIGSFGSVYKGTL------SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKI 234
LG G+FG V+ D VA+K E F E E+L ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDIL--------------ERLNIMIDVG 280
C+ +V E+M +G L ++L SH +L + L + V
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 281 LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATI 340
+ YL H +H DL N L+ + +V + DFG+S+ + D + +TM I
Sbjct: 140 AGMVYLAGLH----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 341 GYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396
+M PE I+ +T+ DV+S+G++L E F+ K + W S + +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK----------QPWYQLSNTEAIDCIT 245
Query: 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445
+ R + ++ ++R C P +R + A+L+ +
Sbjct: 246 QGRELERPRACPPEVYAIMR------GCWQREPQQRHSIKDVHARLQAL 288
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 26/256 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V G +VAIK+ + + F E +V+ N+ H L+++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
++ E+M NG L +L + + L + DV A+EYL L H DL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL----HRDL 137
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----STKCDVY 356
N L+++ V VSDFG+S+ + + D+ + + + PE ++ S+K D++
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 357 SYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLR 416
++G+L+ E +S LG+M + + N +A+ + + R H S K
Sbjct: 197 AFGVLMWEIYS-------LGKMPYERFTNSETAEHIAQGLR---LYRPHLASEK------ 240
Query: 417 IMNLALDCCMESPDER 432
+ + C E DER
Sbjct: 241 VYTIMYSCWHEKADER 256
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 26/197 (13%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
+G G FG V G G VA+K ++ + T +F +E V+ +RH NL+++L
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 83
Query: 241 LDFKA---LVLEFMPNGSLEKWLYSHNYFL---DILERLNIMIDVGLALEYLHYGHALAP 294
++ K +V E+M GSL +L S + D L L +DV A+EYL +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN---- 137
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VS 350
+H DL N+L+ E+ VA VSDFG++K + S Q + + APE + S
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFS 192
Query: 351 TKCDVYSYGILLLETFS 367
TK DV+S+GILL E +S
Sbjct: 193 TKSDVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 26/197 (13%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
+G G FG V G G VA+K ++ + T +F +E V+ +RH NL+++L
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 68
Query: 241 LDFKA---LVLEFMPNGSLEKWLYSHNYFL---DILERLNIMIDVGLALEYLHYGHALAP 294
++ K +V E+M GSL +L S + D L L +DV A+EYL +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN---- 122
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VS 350
+H DL N+L+ E+ VA VSDFG++K + S Q + + APE + S
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 351 TKCDVYSYGILLLETFS 367
TK DV+S+GILL E +S
Sbjct: 178 TKSDVWSFGILLWEIYS 194
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 44/289 (15%)
Query: 181 LGIGSFGSVYKGTL------SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKI 234
LG G+FG V+ D VA+K E F E E+L ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDIL--------------ERLNIMIDVG 280
C+ +V E+M +G L ++L SH +L + L + V
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 281 LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATI 340
+ YL H +H DL N L+ + +V + DFG+S+ + D + +TM I
Sbjct: 169 AGMVYLAGLH----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 341 GYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396
+M PE I+ +T+ DV+S+G++L E F+ K + W S + +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK----------QPWYQLSNTEAIDCIT 274
Query: 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445
+ R + ++ ++R C P +R + A+L+ +
Sbjct: 275 QGRELERPRACPPEVYAIMR------GCWQREPQQRHSIKDVHARLQAL 317
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 26/197 (13%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
+G G FG V G G VA+K ++ + T +F +E V+ +RH NL+++L
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 255
Query: 241 LDFKA---LVLEFMPNGSLEKWLYSHNYFL---DILERLNIMIDVGLALEYLHYGHALAP 294
++ K +V E+M GSL +L S + D L L +DV A+EYL +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN---- 309
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VS 350
+H DL N+L+ E+ VA VSDFG++K + S Q + + APE + S
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 351 TKCDVYSYGILLLETFS 367
TK DV+S+GILL E +S
Sbjct: 365 TKSDVWSFGILLWEIYS 381
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 77
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ +++EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 133
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 193 KSDVWAFGVLLWE 205
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 26/197 (13%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
+G G FG V G G VA+K ++ + T +F +E V+ +RH NL+++L
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 74
Query: 241 LDFKA---LVLEFMPNGSLEKWLYSHNYFL---DILERLNIMIDVGLALEYLHYGHALAP 294
++ K +V E+M GSL +L S + D L L +DV A+EYL +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN---- 128
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VS 350
+H DL N+L+ E+ VA VSDFG++K + S Q + + APE + S
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFS 183
Query: 351 TKCDVYSYGILLLETFS 367
TK DV+S+GILL E +S
Sbjct: 184 TKSDVWSFGILLWEIYS 200
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G FG VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 74
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N + + L + + A+EYL +
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----F 130
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 190 KSDVWAFGVLLWE 202
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 81
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ +++EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 137
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 197 KSDVWAFGVLLWE 209
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 35/218 (16%)
Query: 180 LLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRN--VRHRNLIKILSG 237
L+G G +G+VYKG+L D VA+K+F+ + F++ E + R + H N+ + + G
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN---EKNIYRVPLMEHDNIARFIVG 75
Query: 238 CSNLDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY---- 288
+ LV+E+ PNGSL K+L H D + + V L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 289 -GHALAPIIHCDLKPSNILLDENMVAHVSDFGIS------KLLGEGDDSLIQTKTMATIG 341
H I H DL N+L+ + +SDFG+S +L+ G++ + TI
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 342 YMAP---EGIVS--------TKCDVYSYGILLLETFSR 368
YMAP EG V+ + D+Y+ G++ E F R
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 26/256 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V G +VA+K+ + + F E + + + H L+K CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
+V E++ NG L +L SH L+ + L + DV + +L H IH DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE-SHQF---IHRDL 130
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVY 356
N L+D ++ VSDFG+++ + + D + T + + APE S+K DV+
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 357 SYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLR 416
++GIL+ E FS LG+M + N + K+++ + + R H S D + +
Sbjct: 190 AFGILMWEVFS-------LGKMPYDLYTNSEVVLKVSQ---GHRLYRPHLAS---DTIYQ 236
Query: 417 IMNLALDCCMESPDER 432
IM C E P++R
Sbjct: 237 IM---YSCWHELPEKR 249
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 74
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ +++EFM G+L +L N + + L + + A+EYL +
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----F 130
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 190 KSDVWAFGVLLWE 202
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 81
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 137
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 197 KSDVWAFGVLLWE 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ +++EFM G+L +L N + + L + + A+EYL +
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----F 132
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 192 KSDVWAFGVLLWE 204
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V ++YL A
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASK 151
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 179 NLLGIGSFGSVYKGTL--SDGTNVAIKIFNLQL----ERTFVSFNSECEVLRNVRHRNLI 232
+LG G FGSV +G L DGT++ + + ++L +R F SE +++ H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 233 KILSGCSNLDFKAL-----VLEFMPNGSLEKWL-YSH----NYFLDILERLNIMIDVGLA 282
++L C + + + +L FM G L +L YS + + L M+D+ L
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 283 LEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGY 342
+EYL + L H DL N +L ++M V+DFG+SK + GD + +
Sbjct: 160 MEYLSNRNFL----HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 343 MAPEG----IVSTKCDVYSYGILLLETFSR 368
+A E + ++K DV+++G+ + E +R
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ +++EFM G+L +L N + + L + + A+EYL +
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----F 132
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 192 KSDVWAFGVLLWE 204
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 81
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 137
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 197 KSDVWAFGVLLWE 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 80
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 136
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 196 KSDVWAFGVLLWE 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 81
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 137
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 197 KSDVWAFGVLLWE 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 132
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 192 KSDVWAFGVLLWE 204
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 95
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ +V E+MP G+L +L N + + L + + A+EYL +
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN----F 151
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN V V+DFG+S+L+ GD I + APE + S
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSI 210
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 211 KSDVWAFGVLLWE 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 29/231 (12%)
Query: 181 LGIGSFGSVYKGTLSDGT----NVAIKIFNL---QLERTFVSFNSECEVLRNVRHRNLIK 233
LG G +VY L++ T VAIK + + E T F E + H+N++
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
++ D LV+E++ +L +++ SH L + +N + L+ + + H +
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP-LSVDTAINFTNQI---LDGIKHAHDMR 131
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-TMATIGYMAPE---GIV 349
I+H D+KP NIL+D N + DFGI+K L E SL QT + T+ Y +PE G
Sbjct: 132 -IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET--SLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 350 STKC-DVYSYGILLLETFSRKKPTNDLGE----MSLKHWVNQSLPHKLAEV 395
+ +C D+YS GI+L E + P N GE +++KH + S+P+ +V
Sbjct: 189 TDECTDIYSIGIVLYEMLVGEPPFN--GETAVSIAIKH-IQDSVPNVTTDV 236
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 132
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 192 KSDVWAFGVLLWE 204
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 40/263 (15%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILSG 237
LG G FG V+ T + T VA+K ++ +E +F +E V++ ++H L+K L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE----AFLAEANVMKTLQHDKLVK-LHA 77
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERL---NIMIDVGLA-LEYLHYGHALA 293
+ ++ EFM GSL +L S L +L + I G+A +E +Y
Sbjct: 78 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY----- 132
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----V 349
IH DL+ +NIL+ ++V ++DFG+++++ E ++ + I + APE I
Sbjct: 133 --IHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 350 STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSA 409
+ K DV+S+GILL+E + G + N EV+ + + R +
Sbjct: 190 TIKSDVWSFGILLMEIVT-------YGRIPYPGMSN-------PEVIRA--LERGYRMPR 233
Query: 410 KMDCLLRIMNLALDCCMESPDER 432
+C + N+ + C P+ER
Sbjct: 234 PENCPEELYNIMMRCWKNRPEER 256
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 78
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 134
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 194 KSDVWAFGVLLWE 206
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 89
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 145
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 205 KSDVWAFGVLLWE 217
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 78
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 134
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 194 KSDVWAFGVLLWE 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 81
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N + + L + + A+EYL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----F 137
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 197 KSDVWAFGVLLWE 209
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N + + L + + A+EYL +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----F 132
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 192 KSDVWAFGVLLWE 204
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 77
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 133
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 193 KSDVWAFGVLLWE 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N + + L + + A+EYL +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----F 132
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 192 KSDVWAFGVLLWE 204
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 74
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N + + L + + A+EYL +
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----F 130
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 190 KSDVWAFGVLLWE 202
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 78
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 134
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 194 KSDVWAFGVLLWE 206
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V ++YL A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASK 152
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V ++YL A
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASK 147
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V ++YL A
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASK 151
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V ++YL A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASK 152
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V ++YL A
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASK 150
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V ++YL A
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASK 144
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V ++YL A
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASK 149
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V ++YL A
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASK 170
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V ++YL A
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL----ASK 171
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 40/263 (15%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILSG 237
LG G FG V+ T + T VA+K ++ +E +F +E V++ ++H L+K L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE----AFLAEANVMKTLQHDKLVK-LHA 250
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERL---NIMIDVGLA-LEYLHYGHALA 293
+ ++ EFM GSL +L S L +L + I G+A +E +Y
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY----- 305
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----V 349
IH DL+ +NIL+ ++V ++DFG+++++ E ++ + I + APE I
Sbjct: 306 --IHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 350 STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSA 409
+ K DV+S+GILL+E + G + N EV+ + + R +
Sbjct: 363 TIKSDVWSFGILLMEIVT-------YGRIPYPGMSN-------PEVIRA--LERGYRMPR 406
Query: 410 KMDCLLRIMNLALDCCMESPDER 432
+C + N+ + C P+ER
Sbjct: 407 PENCPEELYNIMMRCWKNRPEER 429
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 131/316 (41%), Gaps = 63/316 (19%)
Query: 143 NRSTKKSDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLS-DG--TN 199
NR K + + + P++ W I + D+ +G G+FG V K + DG +
Sbjct: 4 NRKVKNNPDPTIYPVLDWNDIKFQDV------------IGEGNFGQVLKARIKKDGLRMD 51
Query: 200 VAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLIKILSGCSNLDFKALVLEFMPNGSLE 257
AIK + F E EVL + H N+I +L C + + L +E+ P+G+L
Sbjct: 52 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 111
Query: 258 KWLYSHNYF---------------LDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKP 302
+L L + L+ DV ++YL + IH +L
Sbjct: 112 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL----SQKQFIHRNLAA 167
Query: 303 SNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPE----GIVSTKCDVY 356
NIL+ EN VA ++DFG+S+ G + ++ KTM + +MA E + +T DV+
Sbjct: 168 RNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVW 222
Query: 357 SYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLR 416
SYG+LL E S LG L KL + + ++C
Sbjct: 223 SYGVLLWEIVS-------LGGTPYCGMTCAELYEKLPQ---------GYRLEKPLNCDDE 266
Query: 417 IMNLALDCCMESPDER 432
+ +L C E P ER
Sbjct: 267 VYDLMRQCWREKPYER 282
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V +++L A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASK 152
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V +++L A
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASK 157
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V +++L A
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASK 150
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V +++L A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASK 152
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 179 NLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRNLIKI 234
+ LG+G+FG V G G VA+KI N Q R+ E + L+ RH ++IK+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
S +V+E++ G L ++ N LD E + + ++Y H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM---- 136
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----V 349
++H DLKP N+LLD +M A ++DFG+S ++ +G+ + + Y APE I
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVISGRLYA 193
Query: 350 STKCDVYSYGILLLETFSRKKPTND 374
+ D++S G++L P +D
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V +++L A
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASK 153
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V +++L A
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASK 211
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 179 NLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRNLIKI 234
+ LG+G+FG V G G VA+KI N Q R+ E + L+ RH ++IK+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
S +V+E++ G L ++ H ++ +E + + A++Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHR----HM 131
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----V 349
++H DLKP N+LLD +M A ++DFG+S ++ +G+ ++T + + Y APE I
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRT-SCGSPNYAAPEVISGRLYA 188
Query: 350 STKCDVYSYGILLLETFSRKKPTND 374
+ D++S G++L P +D
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 180 LLGIGSFGSVYKGTL--SDGTNV--AIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKI 234
++G G FG VY GTL +DG + A+K N + VS F +E ++++ H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 235 LSGCSNLDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
L C + LV L +M +G L ++ + + + + + + V +++L A
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL----ASK 153
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N +LDE V+DFG+++ + + + + KT A + +MA E +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 349 -VSTKCDVYSYGILLLETFSRKKP 371
+TK DV+S+G+LL E +R P
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 127/267 (47%), Gaps = 27/267 (10%)
Query: 152 EDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGT-LSDGTNV----AIKIFN 206
E L P T + L I + T E +LG G+FG+VYKG + +G V AIKI N
Sbjct: 18 EPLTPSGTAPNQAQLRILKET-ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN 76
Query: 207 LQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNY 265
+ V F E ++ ++ H +L+++L C + + LV + MP+G L ++++ H
Sbjct: 77 ETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKD 135
Query: 266 FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325
+ LN + + + YL ++H DL N+L+ ++DFG+++LL
Sbjct: 136 NIGSQLLLNWCVQIAKGMMYLEERR----LVHRDLAARNVLVKSPNHVKITDFGLARLL- 190
Query: 326 EGDDSLIQTK-TMATIGYMAPEGI----VSTKCDVYSYGILLLE--TFSRKK----PTND 374
EGD+ I +MA E I + + DV+SYG+ + E TF K PT +
Sbjct: 191 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE 250
Query: 375 LGEMSLKHWVNQSLPHKLAEVVDSNLV 401
+ ++ K + LP +D +V
Sbjct: 251 IPDLLEK---GERLPQPPICTIDVYMV 274
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 322
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 378
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH +L N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 438 KSDVWAFGVLLWE 450
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 280
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N ++ + L + + A+EYL +
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----F 336
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH +L N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 396 KSDVWAFGVLLWE 408
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
Query: 174 EFDECN---LLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHR 229
E+DE +LG G++G VY G LS+ +AIK + R + E + ++++H+
Sbjct: 20 EYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 230 NLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYG 289
N+++ L S F + +E +P GSL L S L E+ I LE L Y
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQILEGLKYL 138
Query: 290 HALAPIIHCDLKPSNILLDE-NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+K N+L++ + V +SDFG SK L G + +T T T+ YMAPE I
Sbjct: 139 HD-NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFT-GTLQYMAPEII 195
Query: 349 ------VSTKCDVYSYGILLLETFSRKKPTNDLGE 377
D++S G ++E + K P +LGE
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE 230
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVYKGTLSDGT-NVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
LG G +G VY+G + VA+K +++E F E V++ ++H NL+++L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 283
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPI 295
C+ ++ EFM G+L +L N + + L + + A+EYL +
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----F 339
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH +L N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 352 KCDVYSYGILLLE 364
K DV+++G+LL E
Sbjct: 399 KSDVWAFGVLLWE 411
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 179 NLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRNLIKI 234
+ LG+G+FG V G G VA+KI N Q R+ E + L+ RH ++IK+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
S +V+E++ G L ++ H ++ +E + + A++Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHR----HM 131
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----V 349
++H DLKP N+LLD +M A ++DFG+S ++ +G+ + + Y APE I
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVISGRLYA 188
Query: 350 STKCDVYSYGILLLETFSRKKPTND 374
+ D++S G++L P +D
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G ++ T VA+K + +F E +++ ++H L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERL-NIMIDVGLALEYLHYGHALAPIIHCD 299
+ ++ E+M GSL +L S +L +L + + + Y+ + IH D
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN----YIHRD 135
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDV 355
L+ +N+L+ E+++ ++DFG+++++ E ++ + I + APE I + K DV
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + K
Sbjct: 195 WSFGILLYEIVTYGK 209
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
Query: 174 EFDECN---LLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHR 229
E+DE +LG G++G VY G LS+ +AIK + R + E + ++++H+
Sbjct: 6 EYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 230 NLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYG 289
N+++ L S F + +E +P GSL L S L E+ I LE L Y
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQILEGLKYL 124
Query: 290 HALAPIIHCDLKPSNILLDE-NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+K N+L++ + V +SDFG SK L G + +T T T+ YMAPE I
Sbjct: 125 HD-NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFT-GTLQYMAPEII 181
Query: 349 ------VSTKCDVYSYGILLLETFSRKKPTNDLGE 377
D++S G ++E + K P +LGE
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 142
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 202 WSFGILLTEIVTHGR 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 140
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 200 WSFGILLTEIVTHGR 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 143
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 203 WSFGILLTEIVTHGR 217
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G ++ T VA+K + +F E +++ ++H L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERL-NIMIDVGLALEYLHYGHALAPIIHCD 299
+ ++ EFM GSL +L S +L +L + + + Y+ + IH D
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN----YIHRD 134
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDV 355
L+ +N+L+ E+++ ++DFG+++++ E ++ + I + APE I + K +V
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + K
Sbjct: 194 WSFGILLYEIVTYGK 208
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 129/312 (41%), Gaps = 63/312 (20%)
Query: 147 KKSDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLS-DG--TNVAIK 203
K + + + P++ W I + D+ +G G+FG V K + DG + AIK
Sbjct: 11 KNNPDPTIYPVLDWNDIKFQDV------------IGEGNFGQVLKARIKKDGLRMDAAIK 58
Query: 204 IFNLQLERT-FVSFNSECEVLRNVRHR-NLIKILSGCSNLDFKALVLEFMPNGSLEKWLY 261
+ F E EVL + H N+I +L C + + L +E+ P+G+L +L
Sbjct: 59 RMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR 118
Query: 262 SHNYF---------------LDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNIL 306
L + L+ DV ++YL + IH DL NIL
Sbjct: 119 KSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL----SQKQFIHRDLAARNIL 174
Query: 307 LDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPE----GIVSTKCDVYSYGI 360
+ EN VA ++DFG+S+ G + ++ KTM + +MA E + +T DV+SYG+
Sbjct: 175 VGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 229
Query: 361 LLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNL 420
LL E S LG L KL + + ++C + +L
Sbjct: 230 LLWEIVS-------LGGTPYCGMTCAELYEKLPQ---------GYRLEKPLNCDDEVYDL 273
Query: 421 ALDCCMESPDER 432
C E P ER
Sbjct: 274 MRQCWREKPYER 285
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 129/312 (41%), Gaps = 63/312 (20%)
Query: 147 KKSDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLS-DG--TNVAIK 203
K + + + P++ W I + D+ +G G+FG V K + DG + AIK
Sbjct: 1 KNNPDPTIYPVLDWNDIKFQDV------------IGEGNFGQVLKARIKKDGLRMDAAIK 48
Query: 204 IFNLQLERT-FVSFNSECEVLRNVRHR-NLIKILSGCSNLDFKALVLEFMPNGSLEKWLY 261
+ F E EVL + H N+I +L C + + L +E+ P+G+L +L
Sbjct: 49 RMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR 108
Query: 262 SHNYF---------------LDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNIL 306
L + L+ DV ++YL + IH DL NIL
Sbjct: 109 KSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL----SQKQFIHRDLAARNIL 164
Query: 307 LDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPE----GIVSTKCDVYSYGI 360
+ EN VA ++DFG+S+ G + ++ KTM + +MA E + +T DV+SYG+
Sbjct: 165 VGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 219
Query: 361 LLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNL 420
LL E S LG L KL + + ++C + +L
Sbjct: 220 LLWEIVS-------LGGTPYCGMTCAELYEKLPQ---------GYRLEKPLNCDDEVYDL 263
Query: 421 ALDCCMESPDER 432
C E P ER
Sbjct: 264 MRQCWREKPYER 275
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 136
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 196 WSFGILLTEIVTHGR 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 144
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 204 WSFGILLTEIVTHGR 218
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 135
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 195 WSFGILLTEIVTHGR 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 26/246 (10%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNV----AIKIFNLQL-ERTFVSFNSECEVLRNV 226
E +LG G+FG+VYKG + +G V AIKI N + V F E ++ ++
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
H +L+++L C + + LV + MP+G L ++++ H + LN + + + YL
Sbjct: 75 DHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-TMATIGYMAP 345
++H DL N+L+ ++DFG+++LL EGD+ I +MA
Sbjct: 134 EERR----LVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIKWMAL 188
Query: 346 EGI----VSTKCDVYSYGILLLE--TFSRKK----PTNDLGEMSLKHWVNQSLPHKLAEV 395
E I + + DV+SYG+ + E TF K PT ++ ++ K + LP
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK---GERLPQPPICT 245
Query: 396 VDSNLV 401
+D +V
Sbjct: 246 IDVYMV 251
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 140
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 200 WSFGILLTEIVTHGR 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 139
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 199 WSFGILLTEIVTHGR 213
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 173 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 229 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 271
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 272 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 315
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 173 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 229 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 271
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 272 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 315
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 129
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 189 WSFGILLTEIVTHGR 203
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 31/269 (11%)
Query: 181 LGIGSFGSVYKGTLSD------GTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY+G D T VA+K N R + F +E V++ ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGLALE 284
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ + + DFG+++ + E D K + + +MA
Sbjct: 142 YLNAKK----FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 345 PE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLG-EMSLKHWVNQSL---PHKLAEV 395
PE G+ +T D++S+G++L E S ++P L E LK ++ P E
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER 257
Query: 396 VDSNLVRREHSFSAKM-DCLLRIMNLALD 423
V ++L+R F+ KM L I+NL D
Sbjct: 258 V-TDLMRMCWQFNPKMRPTFLEIVNLLKD 285
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 159 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 215 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 257
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 258 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 301
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 31/269 (11%)
Query: 181 LGIGSFGSVYKGTLSD------GTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY+G D T VA+K N R + F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGLALE 284
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ + + DFG+++ + E D K + + +MA
Sbjct: 145 YLNAKK----FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 345 PE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLG-EMSLKHWVNQSL---PHKLAEV 395
PE G+ +T D++S+G++L E S ++P L E LK ++ P E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER 260
Query: 396 VDSNLVRREHSFSAKM-DCLLRIMNLALD 423
V ++L+R F+ KM L I+NL D
Sbjct: 261 V-TDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 21/201 (10%)
Query: 181 LGIGSFGSV----YKGTLSDGTNVAIKIFNLQLE---RTFVSFNSECEVLRNVRHRNLIK 233
LG G FG V Y T +DGT + + L+ + + + E ++LR + H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 234 ILSGCSNLDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
C + +L V+E++P GSL +L H+ L L I G+A YLH H
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMA--YLHAQH- 154
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKTMATIGYMAPEGIVS 350
IH DL N+LLD + + + DFG++K + EG + ++ + + + APE +
Sbjct: 155 ---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 351 TK----CDVYSYGILLLETFS 367
K DV+S+G+ L E +
Sbjct: 212 YKFYYASDVWSFGVTLYELLT 232
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 150 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 206 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 248
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 249 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 292
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 159 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 215 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 257
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 258 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 301
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 185 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 241 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 283
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 284 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 327
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 165 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 221 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 263
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 264 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 307
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 37/276 (13%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLE-----RTFVSFNSECEVLRNV 226
E + +LG G FG+V+KG + +G ++ I + +E ++F + + ++
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
H +++++L C + LV +++P GSL + H L LN + + + YL
Sbjct: 91 DHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 149
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
H + +H +L N+LL V+DFG++ LL D L+ ++ I +MA E
Sbjct: 150 EE-HGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 347 GI----VSTKCDVYSYGILLLE--TFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400
I + + DV+SYG+ + E TF +P L +LAEV D L
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMTFG-AEPYAGL---------------RLAEVPD--L 247
Query: 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTT 436
+ + + C + + + + C M DE I T
Sbjct: 248 LEKGERLAQPQICTIDVYMVMVKCWMI--DENIRPT 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 176 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 232 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 274
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 275 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 318
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 175 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 231 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 273
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 274 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 317
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 158 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 214 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 256
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 257 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 300
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 37/276 (13%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLE-----RTFVSFNSECEVLRNV 226
E + +LG G FG+V+KG + +G ++ I + +E ++F + + ++
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
H +++++L C + LV +++P GSL + H L LN + + + YL
Sbjct: 73 DHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 131
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
H + +H +L N+LL V+DFG++ LL D L+ ++ I +MA E
Sbjct: 132 EE-HGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 347 GI----VSTKCDVYSYGILLLE--TFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400
I + + DV+SYG+ + E TF +P L +LAEV D L
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFG-AEPYAGL---------------RLAEVPD--L 229
Query: 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTT 436
+ + + C + + + + C M DE I T
Sbjct: 230 LEKGERLAQPQICTIDVYMVMVKCWMI--DENIRPT 263
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 129/314 (41%), Gaps = 59/314 (18%)
Query: 174 EFDECNL-----LGIGSFGSVYKGTL------SDGTNVAIKIFNLQLERT-FVSFNSECE 221
EF NL LG G FG V K T + T VA+K+ + SE
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWL--------------------- 260
VL+ V H ++IK+ CS L++E+ GSL +L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 261 --YSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDF 318
+ L + + ++ + ++YL A ++H DL NIL+ E +SDF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 319 GISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTND 374
G+S+ + E D + +++ + +MA E I +T+ DV+S+G+LL E +
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT------- 247
Query: 375 LGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIH 434
LG P E + NL++ H +C + L L C + PD+R
Sbjct: 248 LG--------GNPYPGIPPERL-FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 435 TTNAAAKLRKIKVQ 448
+ + L K+ V+
Sbjct: 299 FADISKDLEKMMVK 312
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 199 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 255 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 297
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 298 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 341
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 129/314 (41%), Gaps = 59/314 (18%)
Query: 174 EFDECNL-----LGIGSFGSVYKGTL------SDGTNVAIKIFNLQLERT-FVSFNSECE 221
EF NL LG G FG V K T + T VA+K+ + SE
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWL--------------------- 260
VL+ V H ++IK+ CS L++E+ GSL +L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 261 --YSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDF 318
+ L + + ++ + ++YL A ++H DL NIL+ E +SDF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL----AEMSLVHRDLAARNILVAEGRKMKISDF 194
Query: 319 GISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTND 374
G+S+ + E D + +++ + +MA E I +T+ DV+S+G+LL E +
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT------- 247
Query: 375 LGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIH 434
LG P E + NL++ H +C + L L C + PD+R
Sbjct: 248 LG--------GNPYPGIPPERL-FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 435 TTNAAAKLRKIKVQ 448
+ + L K+ V+
Sbjct: 299 FADISKDLEKMMVK 312
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 159 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 215 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 257
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 258 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 301
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 129/314 (41%), Gaps = 59/314 (18%)
Query: 174 EFDECNL-----LGIGSFGSVYKGTL------SDGTNVAIKIFNLQLERT-FVSFNSECE 221
EF NL LG G FG V K T + T VA+K+ + SE
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWL--------------------- 260
VL+ V H ++IK+ CS L++E+ GSL +L
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 261 --YSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDF 318
+ L + + ++ + ++YL A ++H DL NIL+ E +SDF
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 319 GISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTND 374
G+S+ + E D + +++ + +MA E I +T+ DV+S+G+LL E +
Sbjct: 195 GLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT------- 247
Query: 375 LGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIH 434
LG P E + NL++ H +C + L L C + PD+R
Sbjct: 248 LG--------GNPYPGIPPERL-FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 435 TTNAAAKLRKIKVQ 448
+ + L K+ V+
Sbjct: 299 FADISKDLEKMMVK 312
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 181 LGIGSFGSVYKGTL---SDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKILS 236
LG G+FGSV +G +VAIK+ E+ E +++ + + +++++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPII 296
C + LV+E G L K+L + + ++ V + ++YL + +
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN----FV 132
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI----VS 350
H DL N+LL A +SDFG+SK LG DDS ++ + + APE I S
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 351 TKCDVYSYGILLLETFSR-KKPTNDL 375
++ DV+SYG+ + E S +KP +
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + +++E M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 158 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 214 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 256
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 257 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 300
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 181 LGIGSFGSVYKGTLSDGTN------VAIKIF-NLQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G+FG VY+G +S N VA+K + E+ + F E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLH 287
+ + +++E M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 288 YGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISK------LLGEGDDSLIQTKTMA 338
H IH D+ N LL VA + DFG+++ +G +++ K M
Sbjct: 173 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 339 TIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+M EGI ++K D +S+G+LL E FS LG M NQ EV++
Sbjct: 229 PEAFM--EGIFTSKTDTWSFGVLLWEIFS-------LGYMPYPSKSNQ-------EVLE- 271
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446
V +C + + C P++R N A L +I+
Sbjct: 272 -FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR---PNFAIILERIE 315
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 181 LGIGSFGSV----YKGTLSDGTNVAIKIFNLQLE---RTFVSFNSECEVLRNVRHRNLIK 233
LG G FG V Y T +DGT + + L+ + + + E ++LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 234 ILSGCSNLDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
C + K+L V+E++P GSL +L H+ L L I G+A YLH H
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMA--YLHAQH- 137
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKTMATIGYMAPEGIVS 350
IH +L N+LLD + + + DFG++K + EG + ++ + + + APE +
Sbjct: 138 ---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 351 TK----CDVYSYGILLLETFS 367
K DV+S+G+ L E +
Sbjct: 195 YKFYYASDVWSFGVTLYELLT 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 50/263 (19%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRHRNLIKILSG 237
LG G FG V+ T + T VA+K ++ +E +F +E V++ ++H L+K L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE----AFLAEANVMKTLQHDKLVK-LHA 244
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERL---NIMIDVGLA-LEYLHYGHALA 293
+ ++ EFM GSL +L S L +L + I G+A +E +Y
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY----- 299
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----V 349
IH DL+ +NIL+ ++V ++DFG++++ + I + APE I
Sbjct: 300 --IHRDLRAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSF 346
Query: 350 STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSA 409
+ K DV+S+GILL+E + G + N EV+ + + R +
Sbjct: 347 TIKSDVWSFGILLMEIVT-------YGRIPYPGMSN-------PEVIRA--LERGYRMPR 390
Query: 410 KMDCLLRIMNLALDCCMESPDER 432
+C + N+ + C P+ER
Sbjct: 391 PENCPEELYNIMMRCWKNRPEER 413
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLRNVRH 228
++FD LG G FG+VY + A+K+ F QLE+ V E E+ ++RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
N++++ + + L+LEF P G L K L H F D M ++ AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCHE 132
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
+IH D+KP N+L+ ++DFG S SL + T+ Y+ PE I
Sbjct: 133 ----RKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMI 184
Query: 349 VST----KCDVYSYGILLLE 364
K D++ G+L E
Sbjct: 185 EGKTHDEKVDLWCAGVLCYE 204
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 181 LGIGSFGSV----YKGTLSDGTNVAIKIFNLQLE---RTFVSFNSECEVLRNVRHRNLIK 233
LG G FG V Y T +DGT + + L+ + + + E ++LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 234 ILSGCSNLDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
C + K+L V+E++P GSL +L H+ L L I G+A YLH H
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMA--YLHSQH- 137
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKTMATIGYMAPEGIVS 350
IH +L N+LLD + + + DFG++K + EG + ++ + + + APE +
Sbjct: 138 ---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 351 TK----CDVYSYGILLLETFS 367
K DV+S+G+ L E +
Sbjct: 195 YKFYYASDVWSFGVTLYELLT 215
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLRNVRH 228
++FD LG G FG+VY + A+K+ F QLE+ V E E+ ++RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
N++++ + + L+LEF P G L K L H F D M ++ AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCHE 132
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
+IH D+KP N+L+ ++DFG S SL + T+ Y+ PE I
Sbjct: 133 ----RKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMI 184
Query: 349 VST----KCDVYSYGILLLE 364
K D++ G+L E
Sbjct: 185 EGKTHDEKVDLWCAGVLCYE 204
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLRNVRH 228
++FD LG G FG+VY + A+K+ F QLE+ V E E+ ++RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
N++++ + + L+LEF P G L K L H F D M ++ AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCHE 133
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
+IH D+KP N+L+ ++DFG S SL + T+ Y+ PE I
Sbjct: 134 ----RKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMI 185
Query: 349 VST----KCDVYSYGILLLE 364
K D++ G+L E
Sbjct: 186 EGKTHDEKVDLWCAGVLCYE 205
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 31/269 (11%)
Query: 181 LGIGSFGSVYKGTLSD------GTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY+G D T VA+K N R + F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGLALE 284
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ + + DFG+++ + E D K + + +MA
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 345 PE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLG-EMSLKHWVNQSL---PHKLAEV 395
PE G+ +T D++S+G++L E S ++P L E LK ++ P E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER 260
Query: 396 VDSNLVRREHSFSAKM-DCLLRIMNLALD 423
V ++L+R F+ KM L I+NL D
Sbjct: 261 V-TDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 31/269 (11%)
Query: 181 LGIGSFGSVYKGTLSD------GTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY+G D T VA+K N R + F +E V++ ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGLALE 284
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ + + DFG+++ + E D K + + +MA
Sbjct: 144 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 345 PE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLG-EMSLKHWVNQSL---PHKLAEV 395
PE G+ +T D++S+G++L E S ++P L E LK ++ P E
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER 259
Query: 396 VDSNLVRREHSFSAKM-DCLLRIMNLALD 423
V ++L+R F+ KM L I+NL D
Sbjct: 260 V-TDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 116/262 (44%), Gaps = 31/262 (11%)
Query: 181 LGIGSFGSV----YKGTLSDGTN--VAIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIK 233
LG G FG V Y T +DGT VA+K S + E E+LR + H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 234 ILSGCSNLDFKA--LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
C + K+ LV+E++P GSL +L H L L I G+A YLH H
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMA--YLHAQH- 132
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKTMATIGYMAPEGIVS 350
IH L N+LLD + + + DFG++K + EG + ++ + + + APE +
Sbjct: 133 ---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 351 TK----CDVYSYGILLLETF----SRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402
K DV+S+G+ L E S + P E+ + H Q +L E L+
Sbjct: 190 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTEL-IGHTQGQMTVLRLTE-----LLE 243
Query: 403 REHSFSAKMDCLLRIMNLALDC 424
R C I +L +C
Sbjct: 244 RGERLPRPDRCPCEIYHLMKNC 265
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + ++L E T N E V+ +V
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 167
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 168 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMTFGSK 252
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 116/262 (44%), Gaps = 31/262 (11%)
Query: 181 LGIGSFGSV----YKGTLSDGTN--VAIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIK 233
LG G FG V Y T +DGT VA+K S + E E+LR + H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 234 ILSGCSNLDFKA--LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
C + K+ LV+E++P GSL +L H L L I G+A YLH H
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMA--YLHAQH- 131
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKTMATIGYMAPEGIVS 350
IH L N+LLD + + + DFG++K + EG + ++ + + + APE +
Sbjct: 132 ---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 351 TK----CDVYSYGILLLETF----SRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402
K DV+S+G+ L E S + P E+ + H Q +L E L+
Sbjct: 189 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTEL-IGHTQGQMTVLRLTE-----LLE 242
Query: 403 REHSFSAKMDCLLRIMNLALDC 424
R C I +L +C
Sbjct: 243 RGERLPRPDRCPCEIYHLMKNC 264
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 103/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH +
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRN 130
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ E ++ + I + APE G + K DV
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 190 WSFGILLTEIVTHGR 204
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 181 LGIGSFGSVYKGTLSD------GTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY+G D T VA+K N R + F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGLALE 284
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ + + DFG+++ + E D K + + +MA
Sbjct: 145 YLNAKK----FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 345 PE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLG-EMSLKHWVNQSL---PHKLAEV 395
PE G+ +T D++S+G++L E S ++P L E LK ++ P E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER 260
Query: 396 VDSNLVRREHSFSAKM-DCLLRIMNLALD 423
V ++L+R F+ M L I+NL D
Sbjct: 261 V-TDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 17/218 (7%)
Query: 181 LGIGSFGSVYKGTL---SDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIKILS 236
LG G+FGSV +G +VAIK+ E+ E +++ + + +++++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPII 296
C + LV+E G L K+L + + ++ V + ++YL + +
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN----FV 458
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPEGI----VS 350
H +L N+LL A +SDFG+SK LG DDS ++ + + APE I S
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 351 TKCDVYSYGILLLETFSR-KKPTNDLGEMSLKHWVNQS 387
++ DV+SYG+ + E S +KP + + ++ Q
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG 555
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+++ MP G L ++ H + LN + + + YL
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 135 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSK 219
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+++ MP G L ++ H + LN + + + YL
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 138 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFGSK 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+++ MP G L ++ H + LN + + + YL
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSK 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+++ MP G L ++ H + LN + + + YL
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 135 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSK 219
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+++ MP G L ++ H + LN + + + YL
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSK 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+++ MP G L ++ H + LN + + + YL
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 137 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSK 221
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 275
+I +L C+ +++E+ G+L ++L YS+N + E+L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V +EYL A IH DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 145 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E F+
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 102/195 (52%), Gaps = 12/195 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G G V+ G + T VA+K Q + +F +E +++ ++H+ L+++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
++ E+M NGSL +L + + L I + L++ + + ++ + IH D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDV 355
L+ +NIL+ + + ++DFG+++L+ + + + + I + APE G + K DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTFTIKSDV 193
Query: 356 YSYGILLLETFSRKK 370
+S+GILL E + +
Sbjct: 194 WSFGILLTEIVTHGR 208
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQ--------LERTFVS 215
LD++ +++ + LG G F +VYK TN VAIK L + RT +
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKAR-DKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 216 FNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 275
E ++L+ + H N+I +L + +LV +FM LE + ++ L
Sbjct: 62 ---EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAY 117
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
M+ LEYLH I+H DLKP+N+LLDEN V ++DFG++K G + +
Sbjct: 118 MLMTLQGLEYLHQHW----ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH-- 171
Query: 336 TMATIGYMAPEGIVSTK-----CDVYSYGILLLETFSR 368
+ T Y APE + + D+++ G +L E R
Sbjct: 172 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLR 209
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 275
+I +L C+ +++E+ G+L ++L YS+N + E+L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V +EYL A IH DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 148 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E F+
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 275
+I +L C+ +++E+ G+L ++L YS+N + E+L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V +EYL A IH DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 149 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E F+
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 275
+I +L C+ +++E+ G+L ++L YS+N + E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V +EYL A IH DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E F+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLE--RTFVSFNSECEVLRNVRHRNLIKIL 235
LG G+FGSV L D T + + LQ F E ++L+ + H + I
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 73
Query: 236 SGCSNLDFKA---LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL 292
G S + LV+E++P+G L +L H LD L + +EYL
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC- 132
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEG---- 347
+H DL NIL++ ++DFG++KLL + D +++ + I + APE
Sbjct: 133 ---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 348 IVSTKCDVYSYGILLLETFS 367
I S + DV+S+G++L E F+
Sbjct: 190 IFSRQSDVWSFGVVLYELFT 209
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 275
+I +L C+ +++E+ G+L ++L YS+N + E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V +EYL A IH DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E F+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 143
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 144 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 347 GIV----STKCDVYSYGILLLE--TFSRKK----PTNDLGEMSLKHWVNQSLPHKLAEVV 396
I+ + + DV+SYG+ + E TF K P +++ + K + LP +
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQPPICTI 256
Query: 397 DSNLVRRE 404
D ++ R+
Sbjct: 257 DVYMIMRK 264
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 187 GSVYKGTLSDGTNVAIKIFNLQLERTFVS--FNSECEVLRNVRHRNLIKILSGCSN--LD 242
G ++KG G ++ +K+ ++ T S FN EC LR H N++ +L C +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 243 FKALVLEFMPNGSLEKWLY-SHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLK 301
L+ +MP GSL L+ N+ +D + + +D+ + +LH L P L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIP--RHALN 140
Query: 302 PSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTK-------CD 354
++++DE+M A +S + + S M ++APE + D
Sbjct: 141 SRSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSAD 193
Query: 355 VYSYGILLLETFSRKKPTNDLGEMSL 380
++S+ +LL E +R+ P DL M +
Sbjct: 194 MWSFAVLLWELVTREVPFADLSNMEI 219
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 137 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 347 GIV----STKCDVYSYGILLLE--TFSRKK----PTNDLGEMSLKHWVNQSLPHKLAEVV 396
I+ + + DV+SYG+ + E TF K P +++ + K + LP +
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQPPICTI 249
Query: 397 DSNLVRRE 404
D ++ R+
Sbjct: 250 DVYMIMRK 257
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 347 GIV----STKCDVYSYGILLLE--TFSRKK----PTNDLGEMSLKHWVNQSLPHKLAEVV 396
I+ + + DV+SYG+ + E TF K P +++ + K + LP +
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQPPICTI 246
Query: 397 DSNLVRRE 404
D ++ R+
Sbjct: 247 DVYMIMRK 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G + K L + F D + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALS 127
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 128 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 179
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 39/287 (13%)
Query: 172 TNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERT---FVSFNSECEVLRNVR 227
++ ++ +LG G V+ L D +VA+K+ L R ++ F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 228 HRNLIKIL-SGCSNLDFKAL---VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
H ++ + +G + L V+E++ +L +++ + + ++ D AL
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQAL 129
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-MATIGY 342
+ H IIH D+KP+NI++ V DFGI++ + + +S+ QT + T Y
Sbjct: 130 NFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 343 MAPEGI----VSTKCDVYSYGILLLETFSRKKP-TNDLGE-MSLKHWVNQSLPHKLAEVV 396
++PE V + DVYS G +L E + + P T D + ++ +H +P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSA---- 241
Query: 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLR 443
R SA +D ++ L ++P+ R T AA++R
Sbjct: 242 ------RHEGLSADLDAVV------LKALAKNPENRYQT---AAEMR 273
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 28/219 (12%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNL-------QLERTFVSFNSECEVLR 224
+F LG GSFG V+ + +G A+K+ Q+E T N E +L
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT----NDERLMLS 61
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
V H +I++ + ++++++ G L L F + + + +V LALE
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALE 120
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YLH II+ DLKP NILLD+N ++DFG +K + + + T Y+A
Sbjct: 121 YLH----SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIA 171
Query: 345 PEGIVSTK-----CDVYSYGILLLETFSRKKPTNDLGEM 378
PE +VSTK D +S+GIL+ E + P D M
Sbjct: 172 PE-VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM 209
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSK 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+++ MP G L ++ H + LN + + + YL
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 136 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 347 GIV----STKCDVYSYGILLLE--TFSRKK----PTNDLGEMSLKHWVNQSLPHKLAEVV 396
I+ + + DV+SYG+ + E TF K P +++ + K + LP +
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQPPICTI 248
Query: 397 DSNLVRRE 404
D ++ R+
Sbjct: 249 DVYMIMRK 256
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 137 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSK 221
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 39/287 (13%)
Query: 172 TNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERT---FVSFNSECEVLRNVR 227
++ ++ +LG G V+ L D +VA+K+ L R ++ F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 228 HRNLIKIL-SGCSNLDFKAL---VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
H ++ + +G + L V+E++ +L +++ + + ++ D AL
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQAL 129
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-MATIGY 342
+ H IIH D+KP+NIL+ V DFGI++ + + +S+ QT + T Y
Sbjct: 130 NFSHQNG----IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 343 MAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSL--KHWVNQSLPHKLAEVV 396
++PE V + DVYS G +L E + + P +S+ +H +P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA---- 241
Query: 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLR 443
R SA +D ++ L ++P+ R T AA++R
Sbjct: 242 ------RHEGLSADLDAVV------LKALAKNPENRYQT---AAEMR 273
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSK 220
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 275
+I +L C+ +++E+ G+L ++L YS+N + E+L+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V +EYL A IH DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 197 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E F+
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 141 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSK 225
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 139
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 140 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMTFGSK 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 137 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSK 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSK 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 125/287 (43%), Gaps = 39/287 (13%)
Query: 172 TNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERT---FVSFNSECEVLRNVR 227
++ ++ +LG G V+ L D +VA+K+ L R ++ F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 228 HRNLIKIL-SGCSNLDFKAL---VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
H ++ + +G + L V+E++ +L +++ + + ++ D AL
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQAL 129
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-MATIGY 342
+ H IIH D+KP+NI++ V DFGI++ + + +S+ QT + T Y
Sbjct: 130 NFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 343 MAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSL--KHWVNQSLPHKLAEVV 396
++PE V + DVYS G +L E + + P +S+ +H +P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA---- 241
Query: 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLR 443
R SA +D ++ L ++P+ R T AA++R
Sbjct: 242 ------RHEGLSADLDAVV------LKALAKNPENRYQT---AAEMR 273
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 138 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWE 217
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+++ MP G L ++ H + LN + + + YL
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 136 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSK 220
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+++ MP G L ++ H + LN + + + YL
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 138 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFGSK 222
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 158
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 159 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMTFGSK 243
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 127
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 128 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTFGSK 212
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 147 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWE 226
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLY-------------SHN--YFLDILERLNI 275
+I +L C+ +++E+ G+L ++L SHN L + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V +EYL A IH DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E F+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYL 130
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 131 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 187 SILHRIYTHQSDVWSYGVTVWELMTFGSK 215
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 275
+I +L C+ +++E+ G+L ++L Y +N + E+L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V +EYL A IH DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 141 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E F+
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLE--RTFVSFNSECEVLRNVRHRNLIKIL 235
LG G+FGSV L D T + + LQ F E ++L+ + H + I
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 76
Query: 236 SGCSNLDFKA---LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL 292
G S + LV+E++P+G L +L H LD L + +EYL
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GS 132
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEG---- 347
+H DL NIL++ ++DFG++KLL + D +++ + I + APE
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 348 IVSTKCDVYSYGILLLETFS 367
I S + DV+S+G++L E F+
Sbjct: 193 IFSRQSDVWSFGVVLYELFT 212
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 181 LGIGSFGSVYKGTLSD-GTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLI---KIL 235
LG G FG V + D G VAIK +L + + E ++++ + H N++ ++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 236 SGCSNL---DFKALVLEFMPNGSLEKWLYSHNYFLDILER--LNIMIDVGLALEYLHYGH 290
G L D L +E+ G L K+L + E ++ D+ AL YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 291 ALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG 347
IIH DLKP NI+L + ++ + D G +K L +G+ + T+ + T+ Y+APE
Sbjct: 143 ----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPEL 195
Query: 348 IVSTK----CDVYSYGILLLETFSRKKP 371
+ K D +S+G L E + +P
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 181 LGIGSFGSVYKGTLSD-GTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLI---KIL 235
LG G FG V + D G VAIK +L + + E ++++ + H N++ ++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 236 SGCSNL---DFKALVLEFMPNGSLEKWLYSHNYFLDILER--LNIMIDVGLALEYLHYGH 290
G L D L +E+ G L K+L + E ++ D+ AL YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 291 ALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG 347
IIH DLKP NI+L + ++ + D G +K L +G+ + T+ + T+ Y+APE
Sbjct: 142 ----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPEL 194
Query: 348 IVSTK----CDVYSYGILLLETFSRKKP 371
+ K D +S+G L E + +P
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T+ T+ Y+
Sbjct: 123 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTELCGTLDYLP 174
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 148
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 149 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 200
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 24/248 (9%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 136 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 347 GIV----STKCDVYSYGILLLE--TFSRKK----PTNDLGEMSLKHWVNQSLPHKLAEVV 396
I+ + + DV+SYG+ + E TF K P +++ + K + LP +
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQPPICTI 248
Query: 397 DSNLVRRE 404
D ++ R+
Sbjct: 249 DVYMIMRK 256
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 181 LGIGSFGSV---YKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKIL 235
LG G+FGSV L D T VA+K F E ++L+ + H + I
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 77
Query: 236 SGCSNLDFKA---LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL 292
G S + LV+E++P+G L +L H LD L + +EYL
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GS 133
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEG---- 347
+H DL NIL++ ++DFG++KLL + D +++ + I + APE
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 348 IVSTKCDVYSYGILLLETFS 367
I S + DV+S+G++L E F+
Sbjct: 194 IFSRQSDVWSFGVVLYELFT 213
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 181 LGIGSFGSVYKGTLSD------GTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY+G D T VA+K N R + F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGLALE 284
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ + + DFG+++ + E K + + +MA
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 345 PE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLG-EMSLKHWVNQSL---PHKLAEV 395
PE G+ +T D++S+G++L E S ++P L E LK ++ P E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER 260
Query: 396 VDSNLVRREHSFSAKM-DCLLRIMNLALD 423
V ++L+R F+ KM L I+NL D
Sbjct: 261 V-TDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLE--RTFVSFNSECEVLRNVRHRNLIKIL 235
LG G+FGSV L D T + + LQ F E ++L+ + H + I
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 89
Query: 236 SGCSNLDFKA---LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL 292
G S + LV+E++P+G L +L H LD L + +EYL
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GS 145
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEG---- 347
+H DL NIL++ ++DFG++KLL + D +++ + I + APE
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 348 IVSTKCDVYSYGILLLETFS 367
I S + DV+S+G++L E F+
Sbjct: 206 IFSRQSDVWSFGVVLYELFT 225
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 22/205 (10%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEV--LRNVRHRNLIKI 234
LG GSFG V Y T G VA+KI N + L ++ + E E+ LR +RH ++IK+
Sbjct: 22 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ D +V+E+ N L ++ + + E + A+EY H
Sbjct: 80 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE-QEARRFFQQIISAVEYCHR----HK 133
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----V 349
I+H DLKP N+LLDE++ ++DFG+S ++ +G+ ++T + + Y APE I
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKT-SCGSPNYAAPEVISGKLYA 190
Query: 350 STKCDVYSYGILLLETFSRKKPTND 374
+ DV+S G++L R+ P +D
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q +FD LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALS 126
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL N ++DFG S S +T T+ Y+
Sbjct: 127 YCHSKR----VIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 178
Query: 345 PEGIVS----TKCDVYSYGILLLE 364
PE I K D++S G+L E
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYE 202
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 128 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 179
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 22/205 (10%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEV--LRNVRHRNLIKI 234
LG GSFG V Y T G VA+KI N + L ++ + E E+ LR +RH ++IK+
Sbjct: 12 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ D +V+E+ N L ++ + + E + A+EY H
Sbjct: 70 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE-QEARRFFQQIISAVEYCHR----HK 123
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----V 349
I+H DLKP N+LLDE++ ++DFG+S ++ +G+ ++T + + Y APE I
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKT-SCGSPNYAAPEVISGKLYA 180
Query: 350 STKCDVYSYGILLLETFSRKKPTND 374
+ DV+S G++L R+ P +D
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G + K L + F D + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALS 127
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S + T+ Y+
Sbjct: 128 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLXGTLDYLP 179
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERT---FVSFNSECEVLRNVRHRNLIKI 234
LG G FG V D T + + +L+ E E E+LRN+ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 235 LSGCSNLDFKA--LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL 292
C+ L++EF+P+GSL+++L + +++ ++L + + ++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL----GS 144
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLL-GEGDDSLIQTKTMATIGYMAPEGIVST 351
+H DL N+L++ + DFG++K + + + ++ + + + APE ++ +
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 352 K----CDVYSYGILLLETFS 367
K DV+S+G+ L E +
Sbjct: 205 KFYIASDVWSFGVTLHELLT 224
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 161 RRISYLDIQRATNE----FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVS 215
R++ LD T + FD LG GS+GSVYK + G VAIK + +E
Sbjct: 13 RQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK--QVPVESDLQE 70
Query: 216 FNSECEVLRNVRHRNLIKIL-SGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN 274
E +++ +++K S N D +V+E+ GS+ + N L E
Sbjct: 71 IIKEISIMQQCDSPHVVKYYGSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKTLTEDEIAT 129
Query: 275 IMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQT 334
I+ LEYLH+ IH D+K NILL+ A ++DFG++ L D +
Sbjct: 130 ILQSTLKGLEYLHFMRK----IHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRN 183
Query: 335 KTMATIGYMAPEGI--VSTKC--DVYSYGILLLETFSRKKPTNDLGEM 378
+ T +MAPE I + C D++S GI +E K P D+ M
Sbjct: 184 XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM 231
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + T VA+K+ E+ SE E+++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWL---------YSHNYFLDILERLN------I 275
+I +L C+ +++E+ G+L ++L Y +N + E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V +EYL A IH DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E F+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 22/205 (10%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEV--LRNVRHRNLIKI 234
LG GSFG V Y T G VA+KI N + L ++ + E E+ LR +RH ++IK+
Sbjct: 21 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ D +V+E+ N L ++ + + E + A+EY H
Sbjct: 79 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE-QEARRFFQQIISAVEYCHR----HK 132
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----V 349
I+H DLKP N+LLDE++ ++DFG+S ++ +G+ ++T + + Y APE I
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKT-SCGSPNYAAPEVISGKLYA 189
Query: 350 STKCDVYSYGILLLETFSRKKPTND 374
+ DV+S G++L R+ P +D
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +L G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+++ MP G L ++ H + LN + + + YL
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 141 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSK 225
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 126 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 177
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 22/205 (10%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQ-LERTFVSFNSECEV--LRNVRHRNLIKI 234
LG GSFG V Y T G VA+KI N + L ++ + E E+ LR +RH ++IK+
Sbjct: 16 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ D +V+E+ N L ++ + + E + A+EY H
Sbjct: 74 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE-QEARRFFQQIISAVEYCHR----HK 127
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----V 349
I+H DLKP N+LLDE++ ++DFG+S ++ +G+ ++T + + Y APE I
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKT-SCGSPNYAAPEVISGKLYA 184
Query: 350 STKCDVYSYGILLLETFSRKKPTND 374
+ DV+S G++L R+ P +D
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 139
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 140 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 191
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 192 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 123 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 174
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 128 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 179
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERT---FVSFNSECEVLRNVRHRNLIKI 234
LG G FG V D T + + +L+ E E E+LRN+ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 235 LSGCSNLDFKA--LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL 292
C+ L++EF+P+GSL+++L + +++ ++L + + ++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL----GS 132
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLL-GEGDDSLIQTKTMATIGYMAPEGIVST 351
+H DL N+L++ + DFG++K + + + ++ + + + APE ++ +
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 352 K----CDVYSYGILLLETFS 367
K DV+S+G+ L E +
Sbjct: 193 KFYIASDVWSFGVTLHELLT 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 123 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLP 174
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 141 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSK 225
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 124 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLP 175
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 123 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLP 174
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 180 LLGIGSFGSVYKGTLSDGTNVAIKI----FNLQLERTFVSFNSECEVLRNVRHRNLIKIL 235
+LG G FG K T + V + F+ + +RTF+ E +V+R + H N++K +
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK---EVKVMRCLEHPNVLKFI 73
Query: 236 SGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPI 295
+ E++ G+L + S + +R++ D+ + YLH + I
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN----I 129
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLL------GEGDDSLIQT---KTMATIG---YM 343
IH DL N L+ EN V+DFG+++L+ EG SL + K +G +M
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 344 APEGI----VSTKCDVYSYGILLLETFSR 368
APE I K DV+S+GI+L E R
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 121
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 122 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 173
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +LG G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSK 218
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 123 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTXLCGTLDYLP 174
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 128 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLP 179
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 14/193 (7%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNLQ--LERTFV-SFNSECEVLRNVRH 228
+ F+ +G GSFG V +D + A+K N Q +ER V + E ++++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
L+ + + + +V++ + G L L + +F + +L I ++ +AL+YL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI-CELVMALDYLQN 133
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA-TIGYMAPEG 347
IIH D+KP NILLDE+ H++DF I+ +L Q TMA T YMAPE
Sbjct: 134 QR----IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAGTKPYMAPEM 185
Query: 348 IVSTKCDVYSYGI 360
S K YS+ +
Sbjct: 186 FSSRKGAGYSFAV 198
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 126
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 127 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 178
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++E+ G+L ++L + Y DI + ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 209 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 124 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSC----HAPSSRRTTLSGTLDYLP 175
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 126 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 177
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++E+ G+L ++L + Y DI + ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 150 TYQLARGMEYL----ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 181 LGIGSFGSVYKGTLSD------GTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY+G D T VA+K N R + F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGLALE 284
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H +L N ++ + + DFG+++ + E D K + + +MA
Sbjct: 145 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 345 PE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLG-EMSLKHWVNQSL---PHKLAEV 395
PE G+ +T D++S+G++L E S ++P L E LK ++ P E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER 260
Query: 396 VDSNLVRREHSFSAKM-DCLLRIMNLALD 423
V ++L+R F+ M L I+NL D
Sbjct: 261 V-TDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 181 LGIGSFGSVYKGTLSD------GTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY+G D T VA+K N R + F +E V++ ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD---------ILERLNIMIDVGLALE 284
+L S +V+E M +G L+ +L S + + E + + ++ +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H +L N ++ + + DFG+++ + E D K + + +MA
Sbjct: 146 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 345 PE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLG-EMSLKHWVNQSL---PHKLAEV 395
PE G+ +T D++S+G++L E S ++P L E LK ++ P E
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPER 261
Query: 396 VDSNLVRREHSFSAKM-DCLLRIMNLALD 423
V ++L+R F+ M L I+NL D
Sbjct: 262 V-TDLMRMCWQFNPNMRPTFLEIVNLLKD 289
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 108/267 (40%), Gaps = 38/267 (14%)
Query: 181 LGIGSFGSVYKGTL----SDGTNVAIKIFN---LQLERTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG V +G +VA+K L F E + ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGLALEYLHYGHA 291
+ K +V E P GSL L H ++ L L R + + G+ YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLESKR- 135
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-LIQTKTMATIGYMAPEGI-- 348
IH DL N+LL + + DFG+ + L + DD ++Q + APE +
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 349 --VSTKCDVYSYGILLLETFSR-KKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405
S D + +G+ L E F+ ++P L + H +++ L R E
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---------GERLPRPE- 242
Query: 406 SFSAKMDCLLRIMNLALDCCMESPDER 432
DC I N+ + C P++R
Sbjct: 243 ------DCPQDIYNVMVQCWAHKPEDR 263
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + VA+K+ + E SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++E+ G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWL-----------YSHNYF----LDILERLNI 275
+I +L C+ +++E+ G+L ++L Y N + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++E+ G+L ++L + Y DI + ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 152 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 108/267 (40%), Gaps = 38/267 (14%)
Query: 181 LGIGSFGSVYKGTL----SDGTNVAIKIFN---LQLERTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG V +G +VA+K L F E + ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGLALEYLHYGHA 291
+ K +V E P GSL L H ++ L L R + + G+ YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLESKR- 141
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD-SLIQTKTMATIGYMAPEGI-- 348
IH DL N+LL + + DFG+ + L + DD ++Q + APE +
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 349 --VSTKCDVYSYGILLLETFSR-KKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405
S D + +G+ L E F+ ++P L + H +++ L R E
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---------GERLPRPE- 248
Query: 406 SFSAKMDCLLRIMNLALDCCMESPDER 432
DC I N+ + C P++R
Sbjct: 249 ------DCPQDIYNVMVQCWAHKPEDR 269
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++E+ G+L ++L + Y DI + ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 155 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 153 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWE 232
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 108/267 (40%), Gaps = 38/267 (14%)
Query: 181 LGIGSFGSVYKGTL----SDGTNVAIKIFN---LQLERTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG V +G +VA+K L F E + ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGLALEYLHYGHA 291
+ K +V E P GSL L H ++ L L R + + G+ YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLESKR- 131
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD-SLIQTKTMATIGYMAPEGI-- 348
IH DL N+LL + + DFG+ + L + DD ++Q + APE +
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 349 --VSTKCDVYSYGILLLETFSR-KKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405
S D + +G+ L E F+ ++P L + H +++ L R E
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---------GERLPRPE- 238
Query: 406 SFSAKMDCLLRIMNLALDCCMESPDER 432
DC I N+ + C P++R
Sbjct: 239 ------DCPQDIYNVMVQCWAHKPEDR 259
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 108/267 (40%), Gaps = 38/267 (14%)
Query: 181 LGIGSFGSVYKGTL----SDGTNVAIKIFN---LQLERTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG V +G +VA+K L F E + ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGLALEYLHYGHA 291
+ K +V E P GSL L H ++ L L R + + G+ YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLESKR- 141
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-LIQTKTMATIGYMAPEGI-- 348
IH DL N+LL + + DFG+ + L + DD ++Q + APE +
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 349 --VSTKCDVYSYGILLLETFSR-KKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405
S D + +G+ L E F+ ++P L + H +++ L R E
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---------GERLPRPE- 248
Query: 406 SFSAKMDCLLRIMNLALDCCMESPDER 432
DC I N+ + C P++R
Sbjct: 249 ------DCPQDIYNVMVQCWAHKPEDR 269
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 144 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWE 223
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 143 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWE 222
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 153 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWE 232
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 147 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWE 226
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 108/267 (40%), Gaps = 38/267 (14%)
Query: 181 LGIGSFGSVYKGTL----SDGTNVAIKIFN---LQLERTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG V +G +VA+K L F E + ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGLALEYLHYGHA 291
+ K +V E P GSL L H ++ L L R + + G+ YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLESKR- 135
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-LIQTKTMATIGYMAPEGI-- 348
IH DL N+LL + + DFG+ + L + DD ++Q + APE +
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 349 --VSTKCDVYSYGILLLETFSR-KKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405
S D + +G+ L E F+ ++P L + H +++ L R E
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---------GERLPRPE- 242
Query: 406 SFSAKMDCLLRIMNLALDCCMESPDER 432
DC I N+ + C P++R
Sbjct: 243 ------DCPQDIYNVMVQCWAHKPEDR 263
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 46/289 (15%)
Query: 181 LGIGSFGSVYKGTL------SDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIK 233
LG FG VYKG L VAIK + E F E + ++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDI---------------LERLNIMID 278
+L + +++ + +G L ++L + D+ + ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
+ +EYL H ++H DL N+L+ + + +SD G+ + + D + ++
Sbjct: 154 IAAGMEYLSSHH----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 339 TIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
I +MAPE I+ S D++SYG++L E FS G + NQ +
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-------YGLQPYCGYSNQ-------D 255
Query: 395 VVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLR 443
VV+ ++R DC + L ++C E P R + ++LR
Sbjct: 256 VVE--MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 146 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWE 225
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 108/267 (40%), Gaps = 38/267 (14%)
Query: 181 LGIGSFGSVYKGTL----SDGTNVAIKIFN---LQLERTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG V +G +VA+K L F E + ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGLALEYLHYGHA 291
+ K +V E P GSL L H ++ L L R + + G+ YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLESKR- 131
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-LIQTKTMATIGYMAPEGI-- 348
IH DL N+LL + + DFG+ + L + DD ++Q + APE +
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 349 --VSTKCDVYSYGILLLETFSR-KKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405
S D + +G+ L E F+ ++P L + H +++ L R E
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---------GERLPRPE- 238
Query: 406 SFSAKMDCLLRIMNLALDCCMESPDER 432
DC I N+ + C P++R
Sbjct: 239 ------DCPQDIYNVMVQCWAHKPEDR 259
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +L G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 134 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSK 218
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 47/231 (20%)
Query: 177 ECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKI 234
EC +G G +G V++G L G +VA+KIF+ + E+ S+ E E+ V RH N++
Sbjct: 14 EC--VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQ---SWFRETEIYNTVLLRHDNILGF 67
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNY----FLDILER--------LNIMIDVGLA 282
++ S++ + N S + WL +H + D L+R L + +
Sbjct: 68 IA--SDMTSR--------NSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACG 117
Query: 283 LEYLH---YGHALAPII-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLI--QTKT 336
L +LH +G P I H D K N+L+ N+ ++D G++ + +G D L
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 337 MATIGYMAPEGI---VSTKC-------DVYSYGILLLETFSRKKPTNDLGE 377
+ T YMAPE + + T C D++++G++L E +R+ N + E
Sbjct: 178 VGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWE-IARRTIVNGIVE 227
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 115/286 (40%), Gaps = 54/286 (18%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERTF-VSFNSECEVLRNVRHRNLIK 233
+G G+FG V++ T VA+K+ + F E ++ + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYF-----------------------LDIL 270
+L C+ L+ E+M G L ++L S + L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 271 ERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330
E+L I V + YL + +H DL N L+ ENMV ++DFG+S+ + D
Sbjct: 175 EQLCIARQVAAGMAYL----SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 331 LIQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQ 386
I +M PE I +T+ DV++YG++L E FS L+ +
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS----------YGLQPYYGM 280
Query: 387 SLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432
+ + V D N++ + +C L + NL C + P +R
Sbjct: 281 AHEEVIYYVRDGNIL------ACPENCPLELYNLMRLCWSKLPADR 320
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 108/267 (40%), Gaps = 38/267 (14%)
Query: 181 LGIGSFGSVYKGTL----SDGTNVAIKIFN---LQLERTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG V +G +VA+K L F E + ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGLALEYLHYGHA 291
+ K +V E P GSL L H ++ L L R + + G+ YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLESKR- 131
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-LIQTKTMATIGYMAPEGI-- 348
IH DL N+LL + + DFG+ + L + DD ++Q + APE +
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 349 --VSTKCDVYSYGILLLETFSR-KKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405
S D + +G+ L E F+ ++P L + H +++ L R E
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---------GERLPRPE- 238
Query: 406 SFSAKMDCLLRIMNLALDCCMESPDER 432
DC I N+ + C P++R
Sbjct: 239 ------DCPQDIYNVMVQCWAHKPEDR 259
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 140 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWE 219
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 146 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWE 225
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 46/289 (15%)
Query: 181 LGIGSFGSVYKGTL------SDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRNLIK 233
LG FG VYKG L VAIK + E F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDI---------------LERLNIMID 278
+L + +++ + +G L ++L + D+ + ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
+ +EYL H ++H DL N+L+ + + +SD G+ + + D + ++
Sbjct: 137 IAAGMEYLSSHH----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 339 TIGYMAPEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
I +MAPE I+ S D++SYG++L E FS G + NQ +
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-------YGLQPYCGYSNQ-------D 238
Query: 395 VVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLR 443
VV+ ++R DC + L ++C E P R + ++LR
Sbjct: 239 VVE--MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL-ERTFVSFNSE----CEVLRNV 226
EF + +L G+FG+VYKG + +G V I + +L E T N E V+ +V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++ ++L C + L+ + MP G L ++ H + LN + + + YL
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 141 EDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSK 225
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 119
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S +T T+ Y+
Sbjct: 120 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 171
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 173 NEFDECNLLGIGSFGSVY---KGTLSD-GTNVAIKIF---NLQLERTFVSFNSECEVLRN 225
+ F+ +LG GSFG V+ K T D G A+K+ L++ R V E ++L +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKV-RDRVRTKMERDILAD 86
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
V H ++K+ L+L+F+ G L L F + + + ++ L L++
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALGLDH 145
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMA 344
LH +L II+ DLKP NILLDE ++DFG+SK E D + + T+ YMA
Sbjct: 146 LH---SLG-IIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMA 198
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + S D +SYG+L+ E + P
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 28/247 (11%)
Query: 165 YLDIQRATNEFDECNLLG-IGSFGSVYKGTLSDGTNVAI-KIFNLQLERTFVSFNSECEV 222
Y + R N D ++G +G FG VYK + + +A K+ + + E + E ++
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERL----NIMID 278
L + H N++K+L + +++EF G+++ + LER I +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-------LERPLTESQIQVV 113
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-- 336
L+ L+Y H IIH DLK NIL + ++DFG+S + + IQ +
Sbjct: 114 CKQTLDALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRRDSF 169
Query: 337 MATIGYMAPEGIV---------STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS 387
+ T +MAPE ++ K DV+S GI L+E + P ++L M + + +S
Sbjct: 170 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 229
Query: 388 LPHKLAE 394
P LA+
Sbjct: 230 EPPTLAQ 236
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N ++ E+ + DFG+++ + E D K + + +M+
Sbjct: 175 YLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWE 254
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S + T+ Y+
Sbjct: 126 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLP 177
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVS--FNSECEVLRNV 226
++ +++ L+G GS+G V K D G VAIK F + V E ++L+ +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKW-LYSHNYFLDILERLNIMIDVGLALEY 285
RH NL+ +L C LV EF+ + L+ L+ + ++++ I G+ +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAP 345
H IIH D+KP NIL+ ++ V + DFG ++ L + + +AT Y AP
Sbjct: 142 SH------NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAP 193
Query: 346 EGIV-----STKCDVYSYGILLLETF 366
E +V DV++ G L+ E F
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNL--------QLERTFVSFNSECEVL 223
++D +++G G V + + G A+KI + QLE + E +L
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 224 RNVR-HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLA 282
R V H ++I ++ + F LV + M G L +L + L E +IM + A
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEA 212
Query: 283 LEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGY 342
+ +LH + I+H DLKP NILLD+NM +SDFG S L G+ + T GY
Sbjct: 213 VSFLHANN----IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGY 265
Query: 343 MAPEGI----------VSTKCDVYSYGILLLETFSRKKP 371
+APE + + D+++ G++L + P
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 42/229 (18%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRH 228
R ++F+E +LG G+FG V K + D AIK E + SE +L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 229 -------------RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 275
RN +K ++ + +E+ NG+L ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK------------- 322
+ AL Y+H IIH DLKP NI +DE+ + DFG++K
Sbjct: 122 FRQILEALSYIHS----QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 323 --LLGEGDDSLIQTKTMATIGYMAPE-----GIVSTKCDVYSYGILLLE 364
L G D+ T + T Y+A E G + K D+YS GI+ E
Sbjct: 178 QNLPGSSDN---LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S + T+ Y+
Sbjct: 123 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLP 174
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 37/220 (16%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVR 227
+R +F E L+G G FG V+K DG IK E+ E + L +
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLD 62
Query: 228 HRNLIKILSGC-SNLDFKA----------------LVLEFMPNGSLEKWLYSH-NYFLDI 269
H N++ +GC D+ + +EF G+LE+W+ LD
Sbjct: 63 HVNIVH-YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 270 LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFG-ISKLLGEGD 328
+ L + + ++Y+H +I+ DLKPSNI L + + DFG ++ L +G
Sbjct: 122 VLALELFEQITKGVDYIHS----KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 329 DSLIQTKTMATIGYMAPEGIVST----KCDVYSYGILLLE 364
+ ++ T+ YM+PE I S + D+Y+ G++L E
Sbjct: 178 ----RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++ + G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 148
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S + T+ Y+
Sbjct: 149 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLP 200
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYM 343
Y H +IH D+KP N+LL ++DFG S D+L T+ Y+
Sbjct: 124 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC-----GTLDYL 174
Query: 344 APEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 124
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S + T+ Y+
Sbjct: 125 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLP 176
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 124
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL +++FG S S +T T+ Y+
Sbjct: 125 YCHSKR----VIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLP 176
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q +FD LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALS 126
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYM 343
Y H +IH D+KP N+LL N ++DFG S D+L T+ Y+
Sbjct: 127 YCHSKR----VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC-----GTLDYL 177
Query: 344 APEGIVS----TKCDVYSYGILLLE 364
PE I K D++S G+L E
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYE 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S + T+ Y+
Sbjct: 123 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLP 174
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S + T+ Y+
Sbjct: 126 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLP 177
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVY----KGTLSDG--TNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIK 233
LG GSFG VY KG + D T VAIK N R + F +E V++ ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYS------HNYFL---DILERLNIMIDVGLALE 284
+L S +++E M G L+ +L S +N L + + + + ++ +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YL+ +H DL N + E+ + DFG+++ + E D K + + +M+
Sbjct: 140 YLNANK----FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 345 PE----GIVSTKCDVYSYGILLLE 364
PE G+ +T DV+S+G++L E
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWE 219
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQ-LERTFVSFNSECEVLRNVRHRNLIKILSGC 238
+G G F V + G VAIKI + L +E E L+N+RH+++ ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH-YGHALAPIIH 297
+ +VLE+ P G L ++ S + + R+ + + A+ Y+H G+A H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYA-----H 131
Query: 298 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----VSTK 352
DLKP N+L DE + DFG+ D +QT ++ Y APE I + ++
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSE 190
Query: 353 CDVYSYGILLLETFSRKKPTNDLGEMSL 380
DV+S GILL P +D M+L
Sbjct: 191 ADVWSMGILLYVLMCGFLPFDDDNVMAL 218
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL +++FG S S +T T+ Y+
Sbjct: 126 YCHSKR----VIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLP 177
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 173 NEFDECNLLGIGSFGSVY---KGTLSDGTNV-AIKIF---NLQLERTFVSFNSECEVLRN 225
++F+ +LG GSFG V+ K + SD + A+K+ L++ R V E ++L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVE 82
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
V H ++K+ L+L+F+ G L L F + + + ++ LAL++
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDH 141
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMA 344
LH +L II+ DLKP NILLDE ++DFG+SK E D + + T+ YMA
Sbjct: 142 LH---SLG-IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMA 194
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + + D +S+G+L+ E + P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 41/256 (16%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGT--NVAIKIFNLQLERTF-----------VSFNSE 219
+E+ LG G+ G V K T VAIKI + +R F ++ +E
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS---KRKFAIGSAREADPALNVETE 65
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 279
E+L+ + H +IKI + D+ +VLE M G L + + + +L +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQM 123
Query: 280 GLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKT 336
LA++YLH IIH DLKP N+LL +E+ + ++DFG SK+LGE SL++T
Sbjct: 124 LLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT-L 176
Query: 337 MATIGYMAPEGIVST-------KCDVYSYGILLLETFSRKKPTND-LGEMSLKHWVNQS- 387
T Y+APE +VS D +S G++L S P ++ ++SLK +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 236
Query: 388 ---LPHKLAEVVDSNL 400
+P AEV + L
Sbjct: 237 YNFIPEVWAEVSEKAL 252
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + + A+K+ F QLE+ V E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S + T+ Y+
Sbjct: 123 YCHS----KKVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLP 174
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 173 NEFDECNLLGIGSFGSVY---KGTLSDGTNV-AIKIF---NLQLERTFVSFNSECEVLRN 225
++F+ +LG GSFG V+ K + SD + A+K+ L++ R V E ++L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVE 83
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
V H ++K+ L+L+F+ G L L F + + + ++ LAL++
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDH 142
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMA 344
LH +L II+ DLKP NILLDE ++DFG+SK E D + + T+ YMA
Sbjct: 143 LH---SLG-IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMA 195
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + + D +S+G+L+ E + P
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 41/256 (16%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGT--NVAIKIFNLQLERTF-----------VSFNSE 219
+E+ LG G+ G V K T VAIKI + +R F ++ +E
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS---KRKFAIGSAREADPALNVETE 65
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 279
E+L+ + H +IKI + D+ +VLE M G L + + + +L +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQM 123
Query: 280 GLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKT 336
LA++YLH IIH DLKP N+LL +E+ + ++DFG SK+LGE SL++T
Sbjct: 124 LLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT-L 176
Query: 337 MATIGYMAPEGIVST-------KCDVYSYGILLLETFSRKKPTND-LGEMSLKHWVNQS- 387
T Y+APE +VS D +S G++L S P ++ ++SLK +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 236
Query: 388 ---LPHKLAEVVDSNL 400
+P AEV + L
Sbjct: 237 YNFIPEVWAEVSEKAL 252
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVY--------KGTLSDGTNVAIKIF-NLQLERTFVSFNSECEVLRNV-RHRN 230
LG G+FG V K + VA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH-----NYFLDI----------LERLNI 275
+I +L C+ +++ + G+L ++L + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ +EYL A IH DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 336 TMATIGYMAPEG----IVSTKCDVYSYGILLLETFS 367
+ +MAPE + + + DV+S+G+L+ E F+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKI-FNLQLERTFV--SFNSECEVLR 224
Q A +F+ LG G FG+VY + A+K+ F QLE+ V E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
++RH N++++ + L+LE+ P G++ + L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H +IH D+KP N+LL ++DFG S S + T+ Y+
Sbjct: 126 YCHSKR----VIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLP 177
Query: 345 PEGIVS----TKCDVYSYGILLLETFSRKKP 371
PE I K D++S G+L E K P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 41/256 (16%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGT--NVAIKIFNLQLERTF-----------VSFNSE 219
+E+ LG G+ G V K T VAIKI + +R F ++ +E
Sbjct: 9 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS---KRKFAIGSAREADPALNVETE 64
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 279
E+L+ + H +IKI + D+ +VLE M G L + + + +L +
Sbjct: 65 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQM 122
Query: 280 GLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKT 336
LA++YLH IIH DLKP N+LL +E+ + ++DFG SK+LGE SL++T
Sbjct: 123 LLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT-L 175
Query: 337 MATIGYMAPEGIVST-------KCDVYSYGILLLETFSRKKPTND-LGEMSLKHWVNQS- 387
T Y+APE +VS D +S G++L S P ++ ++SLK +
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 235
Query: 388 ---LPHKLAEVVDSNL 400
+P AEV + L
Sbjct: 236 YNFIPEVWAEVSEKAL 251
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 21/211 (9%)
Query: 173 NEFDECNLLGIGSFGSVY---KGTLSDGTNV-AIKIF---NLQLERTFVSFNSECEVLRN 225
++F+ +LG GSFG V+ K + SD + A+K+ L++ R V E ++L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVE 82
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
V H ++K+ L+L+F+ G L L F + + + ++ LAL++
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDH 141
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMA 344
LH +L II+ DLKP NILLDE ++DFG+SK E D + + T+ YMA
Sbjct: 142 LH---SLG-IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMA 194
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + + D +S+G+L+ E + P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 41/256 (16%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGT--NVAIKIFNLQLERTF-----------VSFNSE 219
+E+ LG G+ G V K T VAIKI + +R F ++ +E
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS---KRKFAIGSAREADPALNVETE 65
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 279
E+L+ + H +IKI + D+ +VLE M G L + + + +L +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQM 123
Query: 280 GLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKT 336
LA++YLH IIH DLKP N+LL +E+ + ++DFG SK+LGE SL++T
Sbjct: 124 LLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT-L 176
Query: 337 MATIGYMAPEGIVST-------KCDVYSYGILLLETFSRKKPTND-LGEMSLKHWVNQS- 387
T Y+APE +VS D +S G++L S P ++ ++SLK +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 236
Query: 388 ---LPHKLAEVVDSNL 400
+P AEV + L
Sbjct: 237 YNFIPEVWAEVSEKAL 252
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 174 EFDECNL-----LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFV------SFNSECE 221
EF NL LG G+FG V + T G A+ +++ ++ + SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 222 VLRNV-RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 280
++ ++ +H N++ +L C++ ++ E+ G L +L + L+ I
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 281 LALEYLHYGHALAP---------IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331
+ LH+ +A IH D+ N+LL VA + DFG+++ + + +
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 332 IQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
++ + +MAPE I + + DV+SYGILL E FS
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 181 LGIGSFGSVY-KGTLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHRNLIKILSGC 238
LG G+FG V+ S G IK N + +E EVL+++ H N+IKI
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILER---LNIMIDVGLALEYLHYGHALAPI 295
+ +V+E G L + + S L +M + AL Y H H +
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH----V 145
Query: 296 IHCDLKPSNILLDE---NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI---V 349
+H DLKP NIL + + + DFG+++L + S T T YMAPE V
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPEVFKRDV 202
Query: 350 STKCDVYSYGILL 362
+ KCD++S G+++
Sbjct: 203 TFKCDIWSAGVVM 215
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 50/233 (21%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVR 227
+R +F E L+G G FG V+K DG I+ E+ E + L +
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLD 63
Query: 228 HRNLIKILSGC-SNLDFKA-----------------------------LVLEFMPNGSLE 257
H N++ +GC D+ + +EF G+LE
Sbjct: 64 HVNIVH-YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLE 122
Query: 258 KWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVS 316
+W+ LD + L + + ++Y+H +IH DLKPSNI L + +
Sbjct: 123 QWIEKRRGEKLDKVLALELFEQITKGVDYIHS----KKLIHRDLKPSNIFLVDTKQVKIG 178
Query: 317 DFG-ISKLLGEGDDSLIQTKTMATIGYMAPEGIVST----KCDVYSYGILLLE 364
DFG ++ L +G +T++ T+ YM+PE I S + D+Y+ G++L E
Sbjct: 179 DFGLVTSLKNDGK----RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 41/256 (16%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGT--NVAIKIFNLQLERTF-----------VSFNSE 219
+E+ LG G+ G V K T VAIKI + +R F ++ +E
Sbjct: 16 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS---KRKFAIGSAREADPALNVETE 71
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 279
E+L+ + H +IKI + D+ +VLE M G L + + + +L +
Sbjct: 72 IEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQM 129
Query: 280 GLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKT 336
LA++YLH IIH DLKP N+LL +E+ + ++DFG SK+LGE SL++T
Sbjct: 130 LLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT-L 182
Query: 337 MATIGYMAPEGIVST-------KCDVYSYGILLLETFSRKKP-TNDLGEMSLKHWVNQS- 387
T Y+APE +VS D +S G++L S P + ++SLK +
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 242
Query: 388 ---LPHKLAEVVDSNL 400
+P AEV + L
Sbjct: 243 YNFIPEVWAEVSEKAL 258
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAI-KIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
LG G+FG VYK + + +A K+ + + E + E ++L + H N++K+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILER----LNIMIDVGLALEYLHYGHALAPI 295
+ +++EF G+++ + LER I + L+ L+Y H I
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE-------LERPLTESQIQVVCKQTLDALNYLHD-NKI 156
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT--MATIGYMAPEGIV---- 349
IH DLK NIL + ++DFG+S + IQ + + T +MAPE ++
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA----KNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 350 -----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
K DV+S GI L+E + P ++L M + + +S P LA+
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 124/287 (43%), Gaps = 39/287 (13%)
Query: 172 TNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERT---FVSFNSECEVLRNVR 227
++ ++ +LG G V+ L +VA+K+ L R ++ F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 228 HRNLIKI-LSGCSNLDFKAL---VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
H ++ + +G + L V+E++ +L +++ + + ++ D AL
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQAL 129
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-MATIGY 342
+ H IIH D+KP+NI++ V DFGI++ + + +S+ QT + T Y
Sbjct: 130 NFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 343 MAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSL--KHWVNQSLPHKLAEVV 396
++PE V + DVYS G +L E + + P +S+ +H +P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA---- 241
Query: 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLR 443
R SA +D ++ L ++P+ R T AA++R
Sbjct: 242 ------RHEGLSADLDAVV------LKALAKNPENRYQT---AAEMR 273
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 124/287 (43%), Gaps = 39/287 (13%)
Query: 172 TNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERT---FVSFNSECEVLRNVR 227
++ ++ +LG G V+ L +VA+K+ L R ++ F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 228 HRNLIKIL-SGCSNLDFKAL---VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
H ++ + +G + L V+E++ +L +++ + + ++ D AL
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQAL 129
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-MATIGY 342
+ H IIH D+KP+NI++ V DFGI++ + + +S+ QT + T Y
Sbjct: 130 NFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 343 MAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSL--KHWVNQSLPHKLAEVV 396
++PE V + DVYS G +L E + + P +S+ +H +P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA---- 241
Query: 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLR 443
R SA +D ++ L ++P+ R T AA++R
Sbjct: 242 ------RHEGLSADLDAVV------LKALAKNPENRYQT---AAEMR 273
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAI-KIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
LG G+FG VYK + + +A K+ + + E + E ++L + H N++K+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILER----LNIMIDVGLALEYLHYGHALAPI 295
+ +++EF G+++ + LER I + L+ L+Y H I
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE-------LERPLTESQIQVVCKQTLDALNYLHD-NKI 156
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT--MATIGYMAPEGIV---- 349
IH DLK NIL + ++DFG+S + IQ + + T +MAPE ++
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA----KNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 350 -----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
K DV+S GI L+E + P ++L M + + +S P LA+
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAI-KIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
LG G+FG VYK + + +A K+ + + E + E ++L + H N++K+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILER----LNIMIDVGLALEYLHYGHALAPI 295
+ +++EF G+++ + LER I + L+ L+Y H I
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE-------LERPLTESQIQVVCKQTLDALNYLHD-NKI 156
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT--MATIGYMAPEGIV---- 349
IH DLK NIL + ++DFG+S + IQ + + T +MAPE ++
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA----KNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 350 -----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
K DV+S GI L+E + P ++L M + + +S P LA+
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 181 LGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
LG G+FG VYK + G A K+ + E + E E+L H ++K+L
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+ +++EF P G+++ + + L I + LE L++ H+ IIH D
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHS-KRIIHRD 142
Query: 300 LKPSNILLDENMVAHVSDFGIS----KLLGEGDDSLIQTKTMATIGYMAPEGIV------ 349
LK N+L+ ++DFG+S K L + DS I T +MAPE ++
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRDSFIGTPY-----WMAPEVVMCETMKD 196
Query: 350 ---STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKL 392
K D++S GI L+E + P ++L M + + +S P L
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL 242
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 181 LGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
LG G+FG VYK + G A K+ + E + E E+L H ++K+L
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
+ +++EF P G+++ + + L I + LE L++ H+ IIH D
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHS-KRIIHRD 134
Query: 300 LKPSNILLDENMVAHVSDFGIS----KLLGEGDDSLIQTKTMATIGYMAPEGIV------ 349
LK N+L+ ++DFG+S K L + DS I T +MAPE ++
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRDSFIGTPY-----WMAPEVVMCETMKD 188
Query: 350 ---STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKL 392
K D++S GI L+E + P ++L M + + +S P L
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL 234
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 26/227 (11%)
Query: 171 ATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLER-TFVSFNSECEVLRNVRH 228
++++F + LG G++ +VYKG + G VA+K L E T + E +++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYF-------LDILERLNIMIDVGL 281
N++++ + LV EFM N L+K++ S L++++ + GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
A + H I+H DLKP N+L+++ + DFG+++ G ++ + + T+
Sbjct: 122 A--FCHENK----ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVTLW 173
Query: 342 YMAPEGIV-----STKCDVYSYGILLLETFSRK---KPTNDLGEMSL 380
Y AP+ ++ ST D++S G +L E + K TND ++ L
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 177 ECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKI 234
EC +G G +G V++G+ G NVA+KIF+ + E+ S+ E E+ V RH N++
Sbjct: 14 EC--VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEK---SWFRETELYNTVMLRHENILGF 67
Query: 235 LSGCSNLDFKA----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH--- 287
++ + L+ + GSL +L LD + L I++ + L +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 288 YGHALAPII-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLI--QTKTMATIGYMA 344
+G P I H DLK NIL+ +N ++D G++ + + + L + T YMA
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 345 PEGIVST----------KCDVYSYGILLLETFSR 368
PE + T + D++++G++L E R
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 31/223 (13%)
Query: 177 ECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKI 234
EC +G G +G V++G+ G NVA+KIF+ + E+ S+ E E+ V RH N++
Sbjct: 14 EC--VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEK---SWFRETELYNTVMLRHENILGF 67
Query: 235 LSGCSNLDFKA----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH--- 287
++ + L+ + GSL +L LD + L I++ + L +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 288 YGHALAPII-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLI--QTKTMATIGYMA 344
+G P I H DLK NIL+ +N ++D G++ + + + L + T YMA
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 345 PEGIVST----------KCDVYSYGILLLETFSRKKPTNDLGE 377
PE + T + D++++G++L E +R+ +N + E
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV-ARRMVSNGIVE 227
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 21/202 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKI 234
+ C ++G GSFG V++ L + VAIK LQ +R N E +++R V+H N++ +
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKRF---KNRELQIMRIVKHPNVVDL 97
Query: 235 LSGC-SNLD-----FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+ SN D F LVLE++P ++ + + + L I + + L L Y
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 289 GHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG 347
H++ I H D+KP N+LLD + V + DFG +K+L G+ ++ + + Y APE
Sbjct: 157 IHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV---SXICSRYYRAPEL 212
Query: 348 IV-----STKCDVYSYGILLLE 364
I +T D++S G ++ E
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAE 234
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 124/287 (43%), Gaps = 39/287 (13%)
Query: 172 TNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERT---FVSFNSECEVLRNVR 227
++ ++ +LG G V+ L +VA+K+ L R ++ F E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 228 HRNLIKIL-SGCSNLDFKAL---VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
H ++ + +G + L V+E++ +L +++ + + ++ D AL
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQAL 146
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-MATIGY 342
+ H IIH D+KP+NI++ V DFGI++ + + +S+ QT + T Y
Sbjct: 147 NFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 343 MAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSL--KHWVNQSLPHKLAEVV 396
++PE V + DVYS G +L E + + P +S+ +H +P
Sbjct: 203 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA---- 258
Query: 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLR 443
R SA +D ++ L ++P+ R T AA++R
Sbjct: 259 ------RHEGLSADLDAVV------LKALAKNPENRYQT---AAEMR 290
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 28/212 (13%)
Query: 184 GSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLR--NVRHRNLIKILSG---C 238
G FG V+K L + VA+KIF LQ ++ S+ SE E+ ++H NL++ ++
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDKQ---SWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 239 SNLDFK-ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH------YGHA 291
SNL+ + L+ F GSL +L + + E ++ + L YLH G
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 292 LAP-IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVS 350
P I H D K N+LL ++ A ++DFG++ G + T YMAPE +
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEG 199
Query: 351 T---------KCDVYSYGILLLETFSRKKPTN 373
+ D+Y+ G++L E SR K +
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 24/225 (10%)
Query: 175 FDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNL---QLERTFVSFNSECEVLRNVRHRN 230
F + +G GSFG+VY + + VAIK + Q + E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 231 LIKILSGCSNLDFKA-LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYG 289
I+ GC + A LV+E+ GS L H L +E + L YLH
Sbjct: 116 TIQ-YRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV 349
+ +IH D+K NILL E + + DFG + ++ + + T +MAPE I+
Sbjct: 174 N----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVIL 223
Query: 350 ST-------KCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS 387
+ K DV+S GI +E RK P ++ MS + + Q+
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 268
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 177 ECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKI 234
EC +G G +G V++G+ G NVA+KIF+ + E+ S+ E E+ V RH N++
Sbjct: 43 EC--VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEK---SWFRETELYNTVMLRHENILGF 96
Query: 235 LSGCSNLDFKA----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH--- 287
++ + L+ + GSL +L LD + L I++ + L +LH
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEI 154
Query: 288 YGHALAPII-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLI--QTKTMATIGYMA 344
+G P I H DLK NIL+ +N ++D G++ + + + L + T YMA
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 345 PEGIVST----------KCDVYSYGILLLETFSR 368
PE + T + D++++G++L E R
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 31/217 (14%)
Query: 159 TWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIK-IFNLQLERTFVSF 216
+W++ + DI++ EF E LG G+F V + G A+K I L+ S
Sbjct: 12 SWKKQAE-DIKKIF-EFKET--LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSI 67
Query: 217 NSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILE 271
+E VLR ++H N++ + + + LV++ + G L EK Y+ ++
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR 127
Query: 272 RLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGD 328
++ L+ ++Y H + I+H DLKP N+L DE +SDFG+SK+ G+GD
Sbjct: 128 QV---------LDAVYYLHRMG-IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 329 DSLIQTKTMATIGYMAPEGIV----STKCDVYSYGIL 361
+ + T GY+APE + S D +S G++
Sbjct: 178 ---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 24/225 (10%)
Query: 175 FDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNL---QLERTFVSFNSECEVLRNVRHRN 230
F + +G GSFG+VY + + VAIK + Q + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 231 LIKILSGCSNLDFKA-LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYG 289
I+ GC + A LV+E+ GS L H L +E + L YLH
Sbjct: 77 TIQ-YRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV 349
+ +IH D+K NILL E + + DFG + ++ + + T +MAPE I+
Sbjct: 135 N----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVIL 184
Query: 350 ST-------KCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS 387
+ K DV+S GI +E RK P ++ MS + + Q+
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 229
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 97
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++P G + L F + R + L
Sbjct: 98 AVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVL 153
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 154 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 201
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 249
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 250 KIVSGKVRFPSHFSSDLKDLLR 271
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 24/198 (12%)
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
+E E+L+ + H +IKI + D+ +VLE M G L + + + +L
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 246
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQT 334
+ LA++YLH IIH DLKP N+LL +E+ + ++DFG SK+LGE SL++T
Sbjct: 247 QMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 300
Query: 335 KTMATIGYMAPEGIVST-------KCDVYSYGILLLETFSRKKPTND-LGEMSLKHWVNQ 386
T Y+APE +VS D +S G++L S P ++ ++SLK +
Sbjct: 301 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 359
Query: 387 S----LPHKLAEVVDSNL 400
+P AEV + L
Sbjct: 360 GKYNFIPEVWAEVSEKAL 377
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 174 EFDECNL-----LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFV------SFNSECE 221
EF NL LG G+FG V + T G A+ +++ ++ + SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 222 VLRNV-RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 280
++ ++ +H N++ +L C++ ++ E+ G L +L + L+ I
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTL 161
Query: 281 LALEYLHYGHALAP---------IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331
+ LH+ +A IH D+ N+LL VA + DFG+++ + + +
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 332 IQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
++ + +MAPE I + + DV+SYGILL E FS
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ +G GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E+MP G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ +G GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E+MP G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 25/225 (11%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTL--SDGTNVAIKIFNLQLERTFVS----FNSEC 220
D+ +F +LG G FGSV + L DG+ V + + L+ + S F E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 221 EVLRNVRHRNLIKILS------GCSNLDFKALVLEFMPNGSLEKWLYSHN-----YFLDI 269
++ H ++ K++ L ++L FM +G L +L + + L +
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 270 LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329
+ M+D+ +EYL + IH DL N +L E+M V+DFG+S+ + GD
Sbjct: 137 QTLVRFMVDIACGMEYLSSRN----FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 330 SLIQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKK 370
+ + ++A E + + DV+++G+ + E +R +
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 21/224 (9%)
Query: 179 NLLGIGSFGSVYKGTLSDGTN----VAIKIFNLQLERTFV-SFNSECEVLRNVRHRN--- 230
++G G FG VY G D AIK + E V +F E ++R + H N
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH 290
LI I+ L ++L +M +G L +++ S + + ++ + V +EYL
Sbjct: 87 LIGIMLPPEGL--PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---- 140
Query: 291 ALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA--TIGYMAPEGI 348
A +H DL N +LDE+ V+DFG+++ + + + +Q A + + A E +
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 349 ----VSTKCDVYSYGILLLETFSRKKPT-NDLGEMSLKHWVNQS 387
+TK DV+S+G+LL E +R P + L H++ Q
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG 244
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 97
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++P G + L F + R + L
Sbjct: 98 AVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 154 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLCG 201
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 249
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 250 KIVSGKVRFPSHFSSDLKDLLR 271
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 24/198 (12%)
Query: 218 SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
+E E+L+ + H +IKI + D+ +VLE M G L + + + +L
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 260
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQT 334
+ LA++YLH IIH DLKP N+LL +E+ + ++DFG SK+LGE SL++T
Sbjct: 261 QMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 314
Query: 335 KTMATIGYMAPEGIVST-------KCDVYSYGILLLETFSRKKPTND-LGEMSLKHWVNQ 386
T Y+APE +VS D +S G++L S P ++ ++SLK +
Sbjct: 315 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 373
Query: 387 S----LPHKLAEVVDSNL 400
+P AEV + L
Sbjct: 374 GKYNFIPEVWAEVSEKAL 391
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 46/260 (17%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 82
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++P G + L F + R + L
Sbjct: 83 AVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 138
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATI 340
EYLH +I+ DLKP N+L+D+ V+DFG +K + +T T+ T
Sbjct: 139 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTP 188
Query: 341 GYMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E +
Sbjct: 189 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYEKI 236
Query: 397 DSNLVRREHSFSAKMDCLLR 416
S VR FS+ + LLR
Sbjct: 237 VSGKVRFPSHFSSDLKDLLR 256
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 97
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++P G + L F + R + L
Sbjct: 98 AVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 154 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 201
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 249
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 250 KIVSGKVRFPSHFSSDLKDLLR 271
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 56/265 (21%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTL----NEKR 86
Query: 222 VLRNVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
+L+ V L+K+ SNL +V+E++P G + L F + R
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 142
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
+ L EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T
Sbjct: 143 IVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 190
Query: 339 TIG---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
G Y+APE I+S D ++ G+L+ E + P + +Q P +
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQ 238
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLR 416
+ E + S VR FS+ + LLR
Sbjct: 239 IYEKIVSGKVRFPSHFSSDLKDLLR 263
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTL----NEKR 93
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+L+ V L+K+ + +V+E++P G + L F + R + L
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 42/229 (18%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRH 228
R ++F+E +LG G+FG V K + D AIK E + SE +L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 229 -------------RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 275
RN +K ++ + +E+ N +L ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK------------- 322
+ AL Y+H IIH DLKP NI +DE+ + DFG++K
Sbjct: 122 FRQILEALSYIHS----QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 323 --LLGEGDDSLIQTKTMATIGYMAPE-----GIVSTKCDVYSYGILLLE 364
L G D+ T + T Y+A E G + K D+YS GI+ E
Sbjct: 178 QNLPGSSDN---LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTL----NEKR 93
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+L+ V L+K+ + +V+E++P G + L F + R + L
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTL----NEKR 93
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+L+ V L+K+ + +V+E++P G + L F + R + L
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 20/224 (8%)
Query: 150 DEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF---- 205
DEED + + R +IQR E C +G G FG V++G N A+ +
Sbjct: 372 DEEDTYTMPSTRD---YEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTC 426
Query: 206 -NLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHN 264
N + F E +R H +++K++ G + +++E G L +L
Sbjct: 427 KNCTSDSVREKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRK 485
Query: 265 YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324
+ LD+ + + AL YL +H D+ N+L+ N + DFG+S+ +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
Query: 325 GEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLE 364
E +K I +MAPE I ++ DV+ +G+ + E
Sbjct: 542 -EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF-----NLQLERTFVSFNSECE 221
+IQR E C +G G FG V++G N A+ + N + F E
Sbjct: 3 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+R H +++K++ G + +++E G L +L Y LD+ + +
Sbjct: 61 TMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
AL YL +H D+ N+L+ N + DFG+S+ + E +K I
Sbjct: 120 ALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK 174
Query: 342 YMAPEGI----VSTKCDVYSYGILLLE 364
+MAPE I ++ DV+ +G+ + E
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWE 201
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF-----NLQLERTFVSFNSECE 221
+IQR E C +G G FG V++G N A+ + N + F E
Sbjct: 9 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+R H +++K++ G + +++E G L +L Y LD+ + +
Sbjct: 67 TMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 125
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
AL YL +H D+ N+L+ N + DFG+S+ + E +K I
Sbjct: 126 ALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK 180
Query: 342 YMAPEGI----VSTKCDVYSYGILLLE 364
+MAPE I ++ DV+ +G+ + E
Sbjct: 181 WMAPESINFRRFTSASDVWMFGVCMWE 207
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF-----NLQLERTFVSFNSECE 221
+IQR E C +G G FG V++G N A+ + N + F E
Sbjct: 8 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+R H +++K++ G + +++E G L +L Y LD+ + +
Sbjct: 66 TMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 124
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
AL YL +H D+ N+L+ N + DFG+S+ + E +K I
Sbjct: 125 ALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK 179
Query: 342 YMAPEGI----VSTKCDVYSYGILLLE 364
+MAPE I ++ DV+ +G+ + E
Sbjct: 180 WMAPESINFRRFTSASDVWMFGVCMWE 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF-----NLQLERTFVSFNSECE 221
+IQR E C +G G FG V++G N A+ + N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+R H +++K++ G + +++E G L +L Y LD+ + +
Sbjct: 64 TMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
AL YL +H D+ N+L+ N + DFG+S+ + E +K I
Sbjct: 123 ALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK 177
Query: 342 YMAPEGI----VSTKCDVYSYGILLLE 364
+MAPE I ++ DV+ +G+ + E
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF-----NLQLERTFVSFNSECE 221
+IQR E C +G G FG V++G N A+ + N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+R H +++K++ G + +++E G L +L Y LD+ + +
Sbjct: 64 TMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
AL YL +H D+ N+L+ N + DFG+S+ + E +K I
Sbjct: 123 ALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK 177
Query: 342 YMAPEGI----VSTKCDVYSYGILLLE 364
+MAPE I ++ DV+ +G+ + E
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 56/265 (21%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTL----NEKR 94
Query: 222 VLRNVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
+L+ V L+K+ SNL +V+E++P G + L F + R
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
+ L EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T
Sbjct: 151 IVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 198
Query: 339 TIG---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
G Y+APE I+S D ++ G+L+ E + P + +Q P +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQ 246
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLR 416
+ E + S VR FS+ + LLR
Sbjct: 247 IYEKIVSGKVRFPSHFSSDLKDLLR 271
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 56/265 (21%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTL----NEKR 94
Query: 222 VLRNVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
+L+ V L+K+ SNL +V+E++P G + L F + R
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
+ L EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T
Sbjct: 151 IVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 198
Query: 339 TIG---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
G Y+APE I+S D ++ G+L+ E + P + +Q P +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQ 246
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLR 416
+ E + S VR FS+ + LLR
Sbjct: 247 IYEKIVSGKVRFPSHFSSDLKDLLR 271
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLER---TFVSFNSECEVLRNVRHRNLIKILS 236
LG GSFG V T VA+K + QL + + E L+ +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPII 296
+ +V+E+ G L ++ + R + A+EY H I+
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCHRHK----IV 130
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----VST 351
H DLKP N+LLD+N+ ++DFG+S ++ +G+ ++T + + Y APE I
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGN--FLKT-SCGSPNYAAPEVINGKLYAGP 187
Query: 352 KCDVYSYGILLLETFSRKKPTND 374
+ DV+S GI+L + P +D
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 56/265 (21%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTL----NEKR 94
Query: 222 VLRNVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
+L+ V L+K+ SNL +V+E++P G + L F + R
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
+ L EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T
Sbjct: 151 IVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 198
Query: 339 TIG---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
G Y+APE I+S D ++ G+L+ E + P + +Q P +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQ 246
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLR 416
+ E + S VR FS+ + LLR
Sbjct: 247 IYEKIVSGKVRFPSHFSSDLKDLLR 271
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF-----NLQLERTFVSFNSECE 221
+IQR E C +G G FG V++G N A+ + N + F E
Sbjct: 34 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+R H +++K++ G + +++E G L +L Y LD+ + +
Sbjct: 92 TMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 150
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
AL YL +H D+ N+L+ N + DFG+S+ + E +K I
Sbjct: 151 ALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK 205
Query: 342 YMAPEGI----VSTKCDVYSYGILLLE 364
+MAPE I ++ DV+ +G+ + E
Sbjct: 206 WMAPESINFRRFTSASDVWMFGVCMWE 232
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 56/265 (21%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTL----NEKR 114
Query: 222 VLRNVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
+L+ V L+K+ SNL +V+E++P G + L F + R
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 170
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
+ L EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T
Sbjct: 171 IVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 218
Query: 339 TIG---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
G Y+APE I+S D ++ G+L+ E + P + +Q P +
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQ 266
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLR 416
+ E + S VR FS+ + LLR
Sbjct: 267 IYEKIVSGKVRFPSHFSSDLKDLLR 291
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF-----NLQLERTFVSFNSECE 221
+IQR E C +G G FG V++G N A+ + N + F E
Sbjct: 11 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+R H +++K++ G + +++E G L +L Y LD+ + +
Sbjct: 69 TMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 127
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
AL YL +H D+ N+L+ N + DFG+S+ + E +K I
Sbjct: 128 ALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK 182
Query: 342 YMAPEGI----VSTKCDVYSYGILLLE 364
+MAPE I ++ DV+ +G+ + E
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWE 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 45/259 (17%)
Query: 146 TKKSDEEDLLPLVTWRRISY---LDIQRATNEFDECNLLGIGSFGSVYKGTLS--DGTNV 200
T SD E V +R Y + R EF + +LG G+FG V T T V
Sbjct: 19 TGSSDNEYFY--VDFREYEYDLKWEFPRENLEFGK--VLGSGAFGKVMNATAYGISKTGV 74
Query: 201 AIKIFNLQLERTFVS-----FNSECEVLRNV-RHRNLIKILSGCSNLDFKALVLEFMPNG 254
+I++ L+ S SE +++ + H N++ +L C+ L+ E+ G
Sbjct: 75 SIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG 134
Query: 255 SLEKWL-------------YSHNYFLDILERLNIMI---------DVGLALEYLHYGHAL 292
L +L Y + L+ E LN++ V +E+L +
Sbjct: 135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---- 190
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAP----EGI 348
+H DL N+L+ V + DFG+++ + + +++ + +MAP EGI
Sbjct: 191 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI 250
Query: 349 VSTKCDVYSYGILLLETFS 367
+ K DV+SYGILL E FS
Sbjct: 251 YTIKSDVWSYGILLWEIFS 269
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 184 GSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEV--LRNVRHRNLIKILSG---C 238
G FG V+K L + VA+KIF +Q ++ S+ +E EV L ++H N+++ +
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQ---SWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 239 SNLDFK-ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY-------GH 290
+++D L+ F GSL +L ++ + L + + GLA YLH GH
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLA--YLHEDIPGLKDGH 148
Query: 291 ALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVS 350
A I H D+K N+LL N+ A ++DFG++ G + + T YMAPE +
Sbjct: 149 KPA-ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG 207
Query: 351 T---------KCDVYSYGILLLETFSR 368
+ D+Y+ G++L E SR
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELASR 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLR 224
++ +F +LG GSF +V L+ AIKI ++ E E +V+
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
+ H +K+ + + L + NG L K++ F + R ++ ALE
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 124
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YLH G IIH DLKP NILL+E+M ++DFG +K+L + T Y++
Sbjct: 125 YLH-GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 345 PE 346
PE
Sbjct: 181 PE 182
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 56/265 (21%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTL----NEKR 86
Query: 222 VLRNVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
+L+ V L+K+ SNL +V+E++P G + L F + R
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 142
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
+ L EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T
Sbjct: 143 IVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWX 190
Query: 339 TIG---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
G Y+APE I+S D ++ G+L+ E + P + +Q P +
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQ 238
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLR 416
+ E + S VR FS+ + LLR
Sbjct: 239 IYEKIVSGKVRFPSHFSSDLKDLLR 263
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS-------------HNYFLDILERLNIMID 278
+L C+ +V+ EF G+L +L S + FL + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
V +E+L A IH DL NILL E V + DFG+++ + + D + +
Sbjct: 157 VAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 339 TIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E FS
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFN-L 207
+D E++ P + YLD + T E E LG G+FG+V KG V L
Sbjct: 353 ADPEEIRP-----KEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKIL 404
Query: 208 QLERTFVSFN----SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH 263
+ E + +E V++ + + +++++ C + LV+E G L K+L +
Sbjct: 405 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN 463
Query: 264 NYFLD--ILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS 321
+ D I+E ++ V + ++YL + +H DL N+LL A +SDFG+S
Sbjct: 464 RHVKDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLS 516
Query: 322 KLLGEGDDSLIQTKTMAT--IGYMAPEGI----VSTKCDVYSYGILLLETFS 367
K L D++ + +T + + APE I S+K DV+S+G+L+ E FS
Sbjct: 517 KAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLR 224
++ +F +LG GSF +V L+ AIKI ++ E E +V+
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
+ H +K+ + + L + NG L K++ F + R ++ ALE
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 123
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YLH G IIH DLKP NILL+E+M ++DFG +K+L + T Y++
Sbjct: 124 YLH-GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 345 PEGIVSTKC----DVYSYGILLLE 364
PE + D+++ G ++ +
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQ 203
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E+ P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+++D+ V+DFG++K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 176 DECNL---LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRN 225
D NL LG G+FG V + + VA+K+ + + SE ++L +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 226 VRHR-NLIKILSGCSNLDFKALVL-EFMPNGSLEKWLYS-----------HNYFLDILER 272
+ H N++ +L C+ +V+ EF G+L +L S + FL +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 273 LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLI 332
+ V +E+L A IH DL NILL E V + DFG+++ + + D +
Sbjct: 147 IXYSFQVAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR 202
Query: 333 QTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ + +MAPE I + + DV+S+G+LL E FS
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLR 224
++ +F +LG GSF +V L+ AIKI ++ E E +V+
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
+ H +K+ + + L + NG L K++ F + R ++ ALE
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 121
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YLH G IIH DLKP NILL+E+M ++DFG +K+L + T Y++
Sbjct: 122 YLH-GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 345 PE 346
PE
Sbjct: 178 PE 179
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFN-L 207
+D E++ P + YLD + T E E LG G+FG+V KG V L
Sbjct: 354 ADPEEIRP-----KEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKIL 405
Query: 208 QLERTFVSFN----SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH 263
+ E + +E V++ + + +++++ C + LV+E G L K+L +
Sbjct: 406 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN 464
Query: 264 NYFLD--ILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS 321
+ D I+E ++ V + ++YL + +H DL N+LL A +SDFG+S
Sbjct: 465 RHVKDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLS 517
Query: 322 KLLGEGDDSLIQTKTMAT--IGYMAPEGI----VSTKCDVYSYGILLLETFS 367
K L D++ + +T + + APE I S+K DV+S+G+L+ E FS
Sbjct: 518 KAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLR 224
++ +F +LG GSF +V L+ AIKI ++ E E +V+
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
+ H +K+ + + L + NG L K++ F + R ++ ALE
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 122
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
YLH G IIH DLKP NILL+E+M ++DFG +K+L + T Y++
Sbjct: 123 YLH-GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 345 PEGIVSTKC----DVYSYGILLLE 364
PE + D+++ G ++ +
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQ 202
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E+ P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+++D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E+ P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+++D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 349 ----VSTKCDVYSYGILLLE 364
S D+++ G ++ +
Sbjct: 207 TEKSASKSSDLWALGCIIYQ 226
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ +G GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 128 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 179
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF-----NLQLERTFVSFNSECE 221
+IQR E C +G G FG V++G N A+ + N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+R H +++K++ G + +++E G L +L + LD+ + +
Sbjct: 64 TMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
AL YL +H D+ N+L+ N + DFG+S+ + E +K I
Sbjct: 123 ALAYLESKR----FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIK 177
Query: 342 YMAPEGI----VSTKCDVYSYGILLLE 364
+MAPE I ++ DV+ +G+ + E
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 31/237 (13%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFN-L 207
+D E++ P + YLD + T E E LG G+FG+V KG V L
Sbjct: 11 ADPEEIRP-----KEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKIL 62
Query: 208 QLERTFVSFN----SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH 263
+ E + +E V++ + + +++++ C + LV+E G L K+L +
Sbjct: 63 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN 121
Query: 264 NYFLD--ILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS 321
+ D I+E ++ V + ++YL + +H DL N+LL A +SDFG+S
Sbjct: 122 RHVKDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLS 174
Query: 322 KLLGEGDDSLIQTKTMAT--IGYMAPEGI----VSTKCDVYSYGILLLETFSR-KKP 371
K L D++ + +T + + APE I S+K DV+S+G+L+ E FS +KP
Sbjct: 175 KAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 31/237 (13%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFN-L 207
+D E++ P + YLD + T E E LG G+FG+V KG V L
Sbjct: 11 ADPEEIRP-----KEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKIL 62
Query: 208 QLERTFVSFN----SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH 263
+ E + +E V++ + + +++++ C + LV+E G L K+L +
Sbjct: 63 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN 121
Query: 264 NYFLD--ILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS 321
+ D I+E ++ V + ++YL + +H DL N+LL A +SDFG+S
Sbjct: 122 RHVKDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLS 174
Query: 322 KLLGEGDDSLIQTKTMAT--IGYMAPEGI----VSTKCDVYSYGILLLETFSR-KKP 371
K L D++ + +T + + APE I S+K DV+S+G+L+ E FS +KP
Sbjct: 175 KAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 31/237 (13%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFN-L 207
+D E++ P + YLD + T E E LG G+FG+V KG V L
Sbjct: 9 ADPEEIRP-----KEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKIL 60
Query: 208 QLERTFVSFN----SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH 263
+ E + +E V++ + + +++++ C + LV+E G L K+L +
Sbjct: 61 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN 119
Query: 264 NYFLD--ILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS 321
+ D I+E ++ V + ++YL + +H DL N+LL A +SDFG+S
Sbjct: 120 RHVKDKNIIE---LVHQVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLS 172
Query: 322 KLLGEGDDSLIQTKTMAT--IGYMAPEGI----VSTKCDVYSYGILLLETFSR-KKP 371
K L D++ + +T + + APE I S+K DV+S+G+L+ E FS +KP
Sbjct: 173 KAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E+ P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+++D+ V+DFG++K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 123 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 174
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 131 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 182
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKILSGC 238
+G G FG V++G G VA+KIF+ + ER S+ E E+ + V RH N++ ++
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAA- 66
Query: 239 SNLDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY---GH 290
N D LV ++ +GSL +L + ++ + +L + GLA +LH G
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA--HLHMEIVGT 124
Query: 291 ALAPII-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS--LIQTKTMATIGYMAPEG 347
P I H DLK NIL+ +N ++D G++ D+ + + T YMAPE
Sbjct: 125 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 184
Query: 348 IVST----------KCDVYSYGILLLETFSR 368
+ + + D+Y+ G++ E R
Sbjct: 185 LDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 83
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 84 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 139
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+DE V+DFG +K ++ +T G
Sbjct: 140 TFEYLHS----LDLIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCG 187
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 235
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 236 KIVSGKVRFPSHFSSDLKDLLR 257
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 124 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 175
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLERTFVSF-NSECEVLRNVRHRNL 231
F + +G GSFG V+KG + + T VAIKI +L+ + E VL +
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
K +++E++ GS L + + D + ++ ++ L+YLH
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLHSEKK 141
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-MATIGYMAPEGI-- 348
IH D+K +N+LL E ++DFG++ G+ D+ I+ T + T +MAPE I
Sbjct: 142 ----IHRDIKAANVLLSEQGDVKLADFGVA---GQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 349 --VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKL 392
+K D++S GI +E + P +D+ M + + ++ P L
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTL 240
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E+ P G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+++D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 125 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 176
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 124 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 175
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 131 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 182
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 180 LLGIGSFGSVYKGTLSD--GTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRNLIKI 234
+LG G FG VY+G ++ G + + + + + T F SE +++N+ H +++K+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ G + +++E P G L +L + L +L + + + A+ YL +
Sbjct: 91 I-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC--- 146
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VS 350
+H D+ NIL+ + DFG+S+ + E +D + T I +M+PE I +
Sbjct: 147 -VHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 351 TKCDVYSYGILLLETFSRKK 370
T DV+ + + + E S K
Sbjct: 205 TASDVWMFAVCMWEILSFGK 224
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKILSGC 238
+G G FG V++G G VA+KIF+ + ER S+ E E+ + V RH N++ ++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAA- 65
Query: 239 SNLDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY---GH 290
N D LV ++ +GSL +L + ++ + +L + GLA +LH G
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA--HLHMEIVGT 123
Query: 291 ALAPII-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS--LIQTKTMATIGYMAPEG 347
P I H DLK NIL+ +N ++D G++ D+ + + T YMAPE
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 183
Query: 348 IVST----------KCDVYSYGILLLETFSR 368
+ + + D+Y+ G++ E R
Sbjct: 184 LDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 174 EFDECNL-----LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFV------SFNSECE 221
EF NL LG G+FG V + T G A+ +++ ++ + SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 222 VLRNV-RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWL---------YSHNYFLDILE 271
++ ++ +H N++ +L C++ ++ E+ G L +L YS+N + E
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 272 RLNIMIDVGLALEYLHYGHALAP---------IIHCDLKPSNILLDENMVAHVSDFGISK 322
+L+ + + LH+ +A IH D+ N+LL VA + DFG+++
Sbjct: 162 QLS-------SRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
Query: 323 LLGEGDDSLIQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ + +++ + +MAPE I + + DV+SYGILL E FS
Sbjct: 215 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 124 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 175
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 44/259 (16%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 117
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 118 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 173
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K + +L T
Sbjct: 174 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE----- 224
Query: 342 YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVD 397
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E +
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYEKIV 272
Query: 398 SNLVRREHSFSAKMDCLLR 416
S VR FS+ + LLR
Sbjct: 273 SGKVRFPSHFSSDLKDLLR 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 123 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 174
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 180 LLGIGSFGSVYKGTLSD--GTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRNLIKI 234
+LG G FG VY+G ++ G + + + + + T F SE +++N+ H +++K+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ G + +++E P G L +L + L +L + + + A+ YL +
Sbjct: 75 I-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC--- 130
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VS 350
+H D+ NIL+ + DFG+S+ + E +D + T I +M+PE I +
Sbjct: 131 -VHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 351 TKCDVYSYGILLLETFSRKK 370
T DV+ + + + E S K
Sbjct: 189 TASDVWMFAVCMWEILSFGK 208
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKILSGC 238
+G G FG V++G G VA+KIF+ + ER S+ E E+ + V RH N++ ++
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIA-A 104
Query: 239 SNLDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY---GH 290
N D LV ++ +GSL +L + ++ + +L + GLA +LH G
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA--HLHMEIVGT 162
Query: 291 ALAPII-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS--LIQTKTMATIGYMAPEG 347
P I H DLK NIL+ +N ++D G++ D+ + + T YMAPE
Sbjct: 163 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 222
Query: 348 IVST----------KCDVYSYGILLLETFSR 368
+ + + D+Y+ G++ E R
Sbjct: 223 LDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKILSGC 238
+G G FG V++G G VA+KIF+ + ER S+ E E+ + V RH N++ ++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAA- 68
Query: 239 SNLDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY---GH 290
N D LV ++ +GSL +L + ++ + +L + GLA +LH G
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA--HLHMEIVGT 126
Query: 291 ALAPII-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS--LIQTKTMATIGYMAPEG 347
P I H DLK NIL+ +N ++D G++ D+ + + T YMAPE
Sbjct: 127 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 186
Query: 348 IVST----------KCDVYSYGILLLETFSR 368
+ + + D+Y+ G++ E R
Sbjct: 187 LDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKILSGC 238
+G G FG V++G G VA+KIF+ + ER S+ E E+ + V RH N++ ++
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIAA- 71
Query: 239 SNLDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY---GH 290
N D LV ++ +GSL +L + ++ + +L + GLA +LH G
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA--HLHMEIVGT 129
Query: 291 ALAPII-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS--LIQTKTMATIGYMAPEG 347
P I H DLK NIL+ +N ++D G++ D+ + + T YMAPE
Sbjct: 130 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 189
Query: 348 IVST----------KCDVYSYGILLLETFSR 368
+ + + D+Y+ G++ E R
Sbjct: 190 LDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKILSGC 238
+G G FG V++G G VA+KIF+ + ER S+ E E+ + V RH N++ ++
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIA-A 91
Query: 239 SNLDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY---GH 290
N D LV ++ +GSL +L + ++ + +L + GLA +LH G
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA--HLHMEIVGT 149
Query: 291 ALAPII-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS--LIQTKTMATIGYMAPEG 347
P I H DLK NIL+ +N ++D G++ D+ + + T YMAPE
Sbjct: 150 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 209
Query: 348 IVST----------KCDVYSYGILLLETFSR 368
+ + + D+Y+ G++ E R
Sbjct: 210 LDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 180 LLGIGSFGSVYKGTLSD--GTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRNLIKI 234
+LG G FG VY+G ++ G + + + + + T F SE +++N+ H +++K+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ G + +++E P G L +L + L +L + + + A+ YL +
Sbjct: 79 I-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC--- 134
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VS 350
+H D+ NIL+ + DFG+S+ + E +D + T I +M+PE I +
Sbjct: 135 -VHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 351 TKCDVYSYGILLLETFSRKK 370
T DV+ + + + E S K
Sbjct: 193 TASDVWMFAVCMWEILSFGK 212
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 176 DECNL---LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRN 225
D NL LG G+FG V + + VA+K+ + + SE ++L +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 226 VRHR-NLIKILSGCSNLDFKALVL-EFMPNGSLEKWLYS-----------HNYFLDILER 272
+ H N++ +L C+ +V+ EF G+L +L S + FL +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 273 LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLI 332
+ V +E+L A IH DL NILL E V + DFG+++ + + D +
Sbjct: 147 ICYSFQVAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 333 QTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ + +MAPE I + + DV+S+G+LL E FS
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 31/214 (14%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS--------------HNYFLDILERLNIMI 277
+L C+ +V+ EF G+L +L S + FL + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
V +E+L A IH DL NILL E V + DFG+++ + + D + +
Sbjct: 156 QVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 338 ATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E FS
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 26/221 (11%)
Query: 165 YLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFN-LQLERTFVSFN----SE 219
YLD + T E E LG G+FG+V KG V L+ E + +E
Sbjct: 12 YLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 68
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD--ILERLNIMI 277
V++ + + +++++ C + LV+E G L K+L + + D I+E ++
Sbjct: 69 ANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE---LVH 124
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
V + ++YL + +H DL N+LL A +SDFG+SK L D++ + +T
Sbjct: 125 QVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTH 179
Query: 338 AT--IGYMAPEGI----VSTKCDVYSYGILLLETFSR-KKP 371
+ + APE I S+K DV+S+G+L+ E FS +KP
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 165 YLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFN-LQLERTFVSFN----SE 219
YLD + T E E LG G+FG+V KG V L+ E + +E
Sbjct: 6 YLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 62
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD--ILERLNIMI 277
V++ + + +++++ C + LV+E G L K+L + + D I+E ++
Sbjct: 63 ANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE---LVH 118
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQTKT 336
V + ++YL + +H DL N+LL A +SDFG+SK L ++ QT
Sbjct: 119 QVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 337 MATIGYMAPEGI----VSTKCDVYSYGILLLETFSR-KKP 371
+ + APE I S+K DV+S+G+L+ E FS +KP
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLAG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 117
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 118 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVL 173
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 174 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 221
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 269
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 270 KIVSGKVRFPSHFSSDLKDLLR 291
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGS-VYKGTLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF + V L+ AIKI ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNIM 276
+L C+ +V+ EF G+L +L S + FL + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
V +E+L A IH DL NILL E V + DFG+++ + + D + +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E FS
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKI-FNLQLERTFVSFN----SECEVLRNV 226
E + +LG G+FG+VYKG + DG NV I + + E T N E V+ V
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+ ++L C + LV + MP G L + + L + LN + + + YL
Sbjct: 77 GSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYL 135
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
++H DL N+L+ ++DFG+++LL + I +MA E
Sbjct: 136 EDVR----LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 347 GIV----STKCDVYSYGILLLE--TFSRK 369
I+ + + DV+SYG+ + E TF K
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAK 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 48/241 (19%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLE-------RTFVSFNSECE---- 221
F + + +G GSFG VYKG + + T VAIKI +L+ + ++ S+C+
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 222 ------VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 275
L++ + +++ L G S LD + G LE+ Y IL
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDL-------LKPGPLEE-----TYIATILR---- 123
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
++ L+YLH IH D+K +N+LL E ++DFG++ L D + +
Sbjct: 124 --EILKGLDYLHSERK----IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNX 175
Query: 336 TMATIGYMAPEGIVST----KCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
+ T +MAPE I + K D++S GI +E + P +DL M + + ++ P
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPT 235
Query: 392 L 392
L
Sbjct: 236 L 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 131
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 132 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 91
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 92 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVL 147
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 148 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 195
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 243
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 244 KIVSGKVRFPSHFSSDLKDLLR 265
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNS--ECEVL 223
L Q ++ + +G G++G VYK S G VA+K L E + + E +L
Sbjct: 14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLL 73
Query: 224 RNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
+ + H N++ ++ + LV EFM L+K L + L + I I + L
Sbjct: 74 KELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLL 129
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
+ + H I+H DLKP N+L++ + ++DFG+++ G S T + T+ Y
Sbjct: 130 RGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYR 186
Query: 344 APEGIV-----STKCDVYSYGILLLETFSRK 369
AP+ ++ ST D++S G + E + K
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 97
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L K+ SNL +V+E+ P G + L F + R + L
Sbjct: 98 AVNFPFLTKLEFSFKDNSNL---YMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVL 153
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+++D+ V+DFG +K ++ +T G
Sbjct: 154 TFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 201
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 249
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 250 KIVSGKVRFPSHFSSDLKDLLR 271
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNS--ECEVL 223
L Q ++ + +G G++G VYK S G VA+K L E + + E +L
Sbjct: 14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLL 73
Query: 224 RNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
+ + H N++ ++ + LV EFM L+K L + L + I I + L
Sbjct: 74 KELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLL 129
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
+ + H I+H DLKP N+L++ + ++DFG+++ G S T + T+ Y
Sbjct: 130 RGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYR 186
Query: 344 APEGIV-----STKCDVYSYGILLLETFSRK 369
AP+ ++ ST D++S G + E + K
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 20/224 (8%)
Query: 150 DEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF---- 205
DEED + + R +IQR E C +G G FG V++G N A+ +
Sbjct: 372 DEEDTYTMPSTRD---YEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTC 426
Query: 206 -NLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHN 264
N + F E +R H +++K++ G + +++E G L +L
Sbjct: 427 KNCTSDSVREKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRK 485
Query: 265 YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324
+ LD+ + + AL YL +H D+ N+L+ + DFG+S+ +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKR----FVHRDIAARNVLVSATDCVKLGDFGLSRYM 541
Query: 325 GEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLE 364
E +K I +MAPE I ++ DV+ +G+ + E
Sbjct: 542 -EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 56/265 (21%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTL----NEKR 94
Query: 222 VLRNVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
+L+ V L+K+ SNL +V+E+ P G + L F + R
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNL---YMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
+ L EYLH +I+ DLKP N+++D+ V+DFG +K ++ +T
Sbjct: 151 IVLTFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWX 198
Query: 339 TIG---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
G Y+APE I+S D ++ G+L+ E + P + +Q P +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQ 246
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLR 416
+ E + S VR FS+ + LLR
Sbjct: 247 IYEKIVSGKVRFPSHFSSDLKDLLR 271
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNIM 276
+L C+ +V+ EF G+L +L S + FL + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
V +E+L A IH DL NILL E V + DFG+++ + + D + +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E FS
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 152
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 153 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 296 IHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----ST 351
IH DL NILL EN V + DFG+++ + + D + + T + +MAPE I ST
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 352 KCDVYSYGILLLETFS 367
K DV+SYG+LL E FS
Sbjct: 281 KSDVWSYGVLLWEIFS 296
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 26/221 (11%)
Query: 165 YLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFN-LQLERTFVSFN----SE 219
YLD + T E E LG G+FG+V KG V L+ E + +E
Sbjct: 2 YLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 58
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD--ILERLNIMI 277
V++ + + +++++ C + LV+E G L K+L + + D I+E ++
Sbjct: 59 ANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE---LVH 114
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
V + ++YL + +H DL N+LL A +SDFG+SK L D++ + +T
Sbjct: 115 QVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTH 169
Query: 338 AT--IGYMAPEGI----VSTKCDVYSYGILLLETFSR-KKP 371
+ + APE I S+K DV+S+G+L+ E FS +KP
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNIM 276
+L C+ +V+ EF G+L +L S + FL + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
V +E+L A IH DL NILL E V + DFG+++ + + D + +
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E FS
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 18/228 (7%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNL 207
SDEE L L + +S D ++ F++ +G G+ G+VY ++ G VAI+ NL
Sbjct: 1 SDEEILEKLRSI--VSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNL 55
Query: 208 QLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFL 267
Q + +E V+R ++ N++ L D +V+E++ GSL + +
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CM 113
Query: 268 DILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327
D + + + ALE+LH +IH D+K NILL + ++DFG +
Sbjct: 114 DEGQIAAVCRECLQALEFLHSNQ----VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 328 DDSLIQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFSRKKP 371
+++ + T +MAPE + K D++S GI+ +E + P
Sbjct: 170 QSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 26/221 (11%)
Query: 165 YLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFN-LQLERTFVSFN----SE 219
YLD + T E E LG G+FG+V KG V L+ E + +E
Sbjct: 6 YLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 62
Query: 220 CEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD--ILERLNIMI 277
V++ + + +++++ C + LV+E G L K+L + + D I+E ++
Sbjct: 63 ANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE---LVH 118
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
V + ++YL + +H DL N+LL A +SDFG+SK L D++ + +T
Sbjct: 119 QVSMGMKYLEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTH 173
Query: 338 AT--IGYMAPEGI----VSTKCDVYSYGILLLETFSR-KKP 371
+ + APE I S+K DV+S+G+L+ E FS +KP
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGLALEYL-HYG 289
+L C+ +V+ EF G+L +L S N F+ E + L LE+L Y
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 290 HALAP---------IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATI 340
+A IH DL NILL E V + DFG+++ + + D + + +
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 341 GYMAPEGIV----STKCDVYSYGILLLETFS 367
+MAPE I + + DV+S+G+LL E FS
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 97
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 98 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 154 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 201
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 249
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 250 KIVSGKVRFPSHFSSDLKDLLR 271
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+++D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 26/232 (11%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNL 207
SDEE L L + +S D ++ F++ +G G+ G+VY ++ G VAI+ NL
Sbjct: 1 SDEEILEKLRSI--VSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNL 55
Query: 208 QLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFL 267
Q + +E V+R ++ N++ L D +V+E++ GSL + +
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CM 113
Query: 268 DILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGE 326
D + + + ALE+LH +IH D+K NILL + ++DFG +++ E
Sbjct: 114 DEGQIAAVCRECLQALEFLHSNQ----VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 327 GDDSLIQTKTMATIG---YMAPEGIV----STKCDVYSYGILLLETFSRKKP 371
Q+K +G +MAPE + K D++S GI+ +E + P
Sbjct: 170 ------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 173 NEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF---NLQLERTFVSFNSECEVLRNVRH 228
+F +LG GSF +V L+ AIKI ++ E E +V+ + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 154
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
G IIH DLKP NILL+E+M ++DFG +K+L + T Y++PE
Sbjct: 155 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GL+ + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 124 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 175
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 26/232 (11%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNL 207
SDEE L L + +S D ++ F++ +G G+ G+VY ++ G VAI+ NL
Sbjct: 1 SDEEILEKLRSI--VSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNL 55
Query: 208 QLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFL 267
Q + +E V+R ++ N++ L D +V+E++ GSL + +
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CM 113
Query: 268 DILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGE 326
D + + + ALE+LH +IH D+K NILL + ++DFG +++ E
Sbjct: 114 DEGQIAAVCRECLQALEFLHSNQ----VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 327 GDDSLIQTKTMATIG---YMAPEGIV----STKCDVYSYGILLLETFSRKKP 371
Q+K +G +MAPE + K D++S GI+ +E + P
Sbjct: 170 ------QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 97
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L K+ SNL +V+E+ P G + L F + R + L
Sbjct: 98 AVNFPFLTKLEFSFKDNSNL---YMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+++D+ V+DFG +K ++ +T G
Sbjct: 154 TFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 201
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 249
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 250 KIVSGKVRFPSHFSSDLKDLLR 271
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 97
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L K+ SNL +V+E+ P G + L F + R + L
Sbjct: 98 AVNFPFLTKLEFSFKDNSNL---YMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+++D+ V+DFG +K ++ +T G
Sbjct: 154 TFEYLHS----LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 201
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 249
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 250 KIVSGKVRFPSHFSSDLKDLLR 271
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 34/268 (12%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRN 230
++F++ + LG G+ G V+K + G +A K+ +L+++ + E +VL
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGLALEYLHYG 289
++ + ++ +E M GSL++ L + IL +++I + GL YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 126
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+KPSNIL++ + DFG+S +L+ E + + T++ YM+PE +
Sbjct: 127 HK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS-----YMSPERL 178
Query: 349 VST----KCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404
T + D++S G+ L+E + P + L ++ P KL V S
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFS------ 232
Query: 405 HSFSAKMDCLLRIMNLALDCCMESPDER 432
L + C +++P ER
Sbjct: 233 ----------LEFQDFVNKCLIKNPAER 250
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIK---IFNLQLERTFVSFNSECEVLRNVRHRNLIKILS 236
+G G F VY+ L DG VA+K IF+L + E ++L+ + H N+IK +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI---MIDVGLALEYLHYGHALA 293
+ +VLE G L + + ++ + + + ALE++H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--- 156
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----V 349
++H D+KP+N+ + V + D G+ + + + T YM+PE I
Sbjct: 157 -VMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHENGY 213
Query: 350 STKCDVYSYGILLLETFSRKKP 371
+ K D++S G LL E + + P
Sbjct: 214 NFKSDIWSLGCLLYEMAALQSP 235
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNIM 276
+L C+ +V+ EF G+L +L S + FL + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
V +E+L A IH DL NILL E V + DFG+++ + + D + +
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E FS
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 26/232 (11%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNL 207
SDEE L L + +S D ++ F++ +G G+ G+VY ++ G VAI+ NL
Sbjct: 2 SDEEILEKLRSI--VSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNL 56
Query: 208 QLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFL 267
Q + +E V+R ++ N++ L D +V+E++ GSL + +
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CM 114
Query: 268 DILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGE 326
D + + + ALE+LH +IH D+K NILL + ++DFG +++ E
Sbjct: 115 DEGQIAAVCRECLQALEFLHSNQ----VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 170
Query: 327 GDDSLIQTKTMATIG---YMAPEGIV----STKCDVYSYGILLLETFSRKKP 371
Q+K +G +MAPE + K D++S GI+ +E + P
Sbjct: 171 ------QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 116/265 (43%), Gaps = 56/265 (21%)
Query: 173 NEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECE 221
++F+ LG GSFG V +K T G + A+KI + Q +E T +E
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTL----NEKR 94
Query: 222 VLRNVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
+ + V L+K+ SNL +VLE+ P G + L F + R
Sbjct: 95 IQQAVNFPFLVKLEFSFKDNSNL---YMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
+ L EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T
Sbjct: 151 IVLTFEYLHS----LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWX 198
Query: 339 TIG---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391
G Y+APE I+S D ++ G+L+ E + P + +Q P +
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQ 246
Query: 392 LAEVVDSNLVRREHSFSAKMDCLLR 416
+ E + S VR FS+ + LLR
Sbjct: 247 IYEKIVSGKVRFPSHFSSDLKDLLR 271
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 59/274 (21%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLE-------RTFVSFNSECE---- 221
F + +G GSFG V+KG + + T VAIKI +L+ + ++ S+C+
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 222 ------VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 275
L++ + +++ L G S LD +LE P LD + I
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALD----LLEPGP--------------LDETQIATI 109
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
+ ++ L+YLH IH D+K +N+LL E+ ++DFG++ G+ D+ I+
Sbjct: 110 LREILKGLDYLHSEKK----IHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRN 162
Query: 336 T-MATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP- 389
T + T +MAPE I +K D++S GI +E + P ++L M + + ++ P
Sbjct: 163 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP 222
Query: 390 -------HKLAEVVDSNLVRREHSFSAKMDCLLR 416
L E V++ L +E SF LL+
Sbjct: 223 TLEGNYSKPLKEFVEACL-NKEPSFRPTAKELLK 255
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 30/220 (13%)
Query: 174 EFDECNL-----LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFV------SFNSECE 221
EF NL LG G+FG V + T G A+ +++ ++ + SE +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 222 VLRNV-RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLY---------SHNYFLDILE 271
++ ++ +H N++ +L C++ ++ E+ G L +L L++ +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 272 RLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331
L+ V + +L A IH D+ N+LL VA + DFG+++ + + +
Sbjct: 162 LLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 217
Query: 332 IQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
++ + +MAPE I + + DV+SYGILL E FS
Sbjct: 218 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 30/220 (13%)
Query: 174 EFDECNL-----LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFV------SFNSECE 221
EF NL LG G+FG V + T G A+ +++ ++ + SE +
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 222 VLRNV-RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLY---------SHNYFLDILE 271
++ ++ +H N++ +L C++ ++ E+ G L +L L++ +
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 153
Query: 272 RLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331
L+ V + +L A IH D+ N+LL VA + DFG+++ + + +
Sbjct: 154 LLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 209
Query: 332 IQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
++ + +MAPE I + + DV+SYGILL E FS
Sbjct: 210 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++F+ LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 127 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 178
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 93/229 (40%), Gaps = 42/229 (18%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRH 228
R ++F+E +LG G+FG V K + D AIK E + SE +L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 229 -------------RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 275
RN +K + + E+ N +L ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK------------- 322
+ AL Y+H IIH +LKP NI +DE+ + DFG++K
Sbjct: 122 FRQILEALSYIHS----QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 323 --LLGEGDDSLIQTKTMATIGYMAPE-----GIVSTKCDVYSYGILLLE 364
L G D+ T + T Y+A E G + K D YS GI+ E
Sbjct: 178 QNLPGSSDN---LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNIM 276
+L C+ +V+ EF G+L +L S + FL + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
V +E+L A IH DL NILL E V + DFG+++ + + D + +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E FS
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 127 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 178
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 126 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 177
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 172 TNEFDECNLLGIGSFGSVY--KGTLSDGTNVAIKIFNLQLERTFVSFNS---ECEVLRNV 226
++ + +LG GSFG V K ++ G A+K+ + + + S E ++L+ +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
H N++K+ + + LV E G L + S F ++ + I+ V + Y+
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 148
Query: 287 HYGHALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
H I+H DLKP N+LL+ ++ + DFG+S + S + T Y+
Sbjct: 149 HKN----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 201
Query: 344 APE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSL 380
APE G KCDV+S G++L S P N E +
Sbjct: 202 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI 241
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 124 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 175
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 126 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 177
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 124 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 175
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 123 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 174
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 123 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 174
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 125 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 176
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 172 TNEFDECNLLGIGSFGSVY--KGTLSDGTNVAIKIFNLQLERTFVSFNS---ECEVLRNV 226
++ + +LG GSFG V K ++ G A+K+ + + + S E ++L+ +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
H N++K+ + + LV E G L + S F ++ + I+ V + Y+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 165
Query: 287 HYGHALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
H I+H DLKP N+LL+ ++ + DFG+S + S + T Y+
Sbjct: 166 HKN----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 218
Query: 344 APE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSL 380
APE G KCDV+S G++L S P N E +
Sbjct: 219 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI 258
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNIM 276
+L C+ +V+ EF G+L +L S + FL + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
V +E+L A IH DL NILL E V + DFG+++ + + D + +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E FS
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 124 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 175
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 126 ------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 177
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 172 TNEFDECNLLGIGSFGSVY--KGTLSDGTNVAIKIFNLQLERTFVSFNS---ECEVLRNV 226
++ + +LG GSFG V K ++ G A+K+ + + + S E ++L+ +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
H N++K+ + + LV E G L + S F ++ + I+ V + Y+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 166
Query: 287 HYGHALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
H I+H DLKP N+LL+ ++ + DFG+S + S + T Y+
Sbjct: 167 HKN----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 219
Query: 344 APE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSL 380
APE G KCDV+S G++L S P N E +
Sbjct: 220 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI 259
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 25/242 (10%)
Query: 181 LGIGSFGSVYK-GTLSDGTNVAIKIFNL--QLERTFVSFNSECEVLRNVRHRNLIKILSG 237
+G GS+G K SDG + K + E SE +LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 238 CSNLDFKAL--VLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGLALEYLHY---- 288
+ L V+E+ G L + +LD L +M + LAL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
GH ++H DLKP+N+ LD + DFG++++L +D + + T YM+PE +
Sbjct: 134 GHT---VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED--FAKEFVGTPYYMSPEQM 188
Query: 349 ----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS----LPHKLAEVVDSNL 400
+ K D++S G LL E + P + L + + +P++ ++ ++ +
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEII 248
Query: 401 VR 402
R
Sbjct: 249 TR 250
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 181 LGIGSFGSVYKGTLSDG-TNVAIKIF-------------NLQLERTFVSFNSECEVLRNV 226
LG G++G V +G + AIK+ N +E+ +E +L+++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
H N+IK+ + + LV EF G L + + + + F D + NIM + + YL
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANIMKQILSGICYL 162
Query: 287 HYGHALAPIIHCDLKPSNILLDEN---MVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
H + I+H D+KP NILL+ + + DFG+S + D ++ + + T Y+
Sbjct: 163 HKHN----IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK--DYKLRDR-LGTAYYI 215
Query: 344 APEGI---VSTKCDVYSYGILL 362
APE + + KCDV+S G+++
Sbjct: 216 APEVLKKKYNEKCDVWSCGVIM 237
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNIM 276
+L C+ +V+ EF G+L +L S + FL + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
V +E+L A IH DL NILL E V + DFG+++ + + D + +
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E FS
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 128 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 179
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ E + P P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP------------FFADEPIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 27/258 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLERTFVSF-NSECEVLRNVRHRNL 231
F + +G GSFG V+KG + + T VAIKI +L+ + E VL +
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
K +++E++ GS L LD + I+ ++ L+YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKK 145
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-MATIGYMAPEGI-- 348
IH D+K +N+LL E+ ++DFG++ G+ D+ I+ T + T +MAPE I
Sbjct: 146 ----IHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 349 --VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP--------HKLAEVVDS 398
+K D++S GI +E + P ++L M + + ++ P L E V++
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA 258
Query: 399 NLVRREHSFSAKMDCLLR 416
L +E SF LL+
Sbjct: 259 CL-NKEPSFRPTAKELLK 275
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 23/205 (11%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFN-LQLERTFVSFN----SECEVLRNVRHRNLIKIL 235
LG G+FG+V KG V L+ E + +E V++ + + +++++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 236 SGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD--ILERLNIMIDVGLALEYLHYGHALA 293
C + LV+E G L K+L + + D I+E ++ V + ++YL +
Sbjct: 73 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIE---LVHQVSMGMKYLEESN--- 125
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT--IGYMAPEGI--- 348
+H DL N+LL A +SDFG+SK L D++ + +T + + APE I
Sbjct: 126 -FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 349 -VSTKCDVYSYGILLLETFSR-KKP 371
S+K DV+S+G+L+ E FS +KP
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 125 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 176
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 125 ------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 176
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+APE I+S D ++ G+L+ + + P + +Q P ++ E
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQ-LERTFVSFNS--------ECEVLRN 225
F+ +LG G +G V++ G N KIF ++ L++ + N+ E +L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
V+H ++ ++ L+LE++ G L L F++ + ++ +AL +
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGH 136
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAP 345
LH II+ DLKP NI+L+ ++DFG+ K D + TI YMAP
Sbjct: 137 LHQ----KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAP 190
Query: 346 EGIVST----KCDVYSYGILLLETFSRKKP 371
E ++ + D +S G L+ + + P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQ-LERTFVSFNS--------ECEVLRN 225
F+ +LG G +G V++ G N KIF ++ L++ + N+ E +L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
V+H ++ ++ L+LE++ G L L F++ + ++ +AL +
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGH 136
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAP 345
LH II+ DLKP NI+L+ ++DFG+ K D + TI YMAP
Sbjct: 137 LHQ----KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAP 190
Query: 346 EGIVST----KCDVYSYGILLLETFSRKKP 371
E ++ + D +S G L+ + + P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 172 TNEFDECNLLGIGSFGSVY--KGTLSDGTNVAIKIFNLQLERTFVSFNS---ECEVLRNV 226
++ + +LG GSFG V K ++ G A+K+ + + + S E ++L+ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
H N++K+ + + LV E G L + S F ++ + I+ V + Y+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 287 HYGHALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
H I+H DLKP N+LL+ ++ + DFG+S + S + T Y+
Sbjct: 143 HKN----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYI 195
Query: 344 APE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSL 380
APE G KCDV+S G++L S P N E +
Sbjct: 196 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI 235
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 124 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 175
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+ L E V + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 124 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 175
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+ L E V + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE +
Sbjct: 123 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 174
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 181 LGIGSFGSVYKG------TLSDGTNVAIKIFNLQLERT-FVSFNSECEVLRNVRHR-NLI 232
LG G+FG V + + VA+K+ + + SE ++L ++ H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 233 KILSGCSNLDFKALVL-EFMPNGSLEKWLYS---------------HNYFLDILERLNIM 276
+L C+ +V+ EF G+L +L S + FL + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
V +E+L A IH DL NILL E V + DFG+++ + + D + +
Sbjct: 192 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+S+G+LL E FS
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 127 ------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 178
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 17/207 (8%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIF-----NLQLERTFVSFNSECE 221
+IQR E C +G G FG V++G N A+ + N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+R H +++K++ G + +++E G L +L + LD+ + +
Sbjct: 64 TMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
AL YL +H D+ N+L+ + DFG+S+ + E +K I
Sbjct: 123 ALAYLESKR----FVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK 177
Query: 342 YMAPEGI----VSTKCDVYSYGILLLE 364
+MAPE I ++ DV+ +G+ + E
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 31/214 (14%)
Query: 179 NLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILS 236
L+G G FG VY G VAI++ +++ E +F E R RH N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPII 296
C + A++ +L + LD+ + I ++ + YLH I+
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH----AKGIL 152
Query: 297 HCDLKPSNILLDENMVAHVSDFG---ISKLL--GEGDDSL-IQTKTMATIGYMAPEGI-- 348
H DLK N+ D V ++DFG IS +L G +D L IQ + ++APE I
Sbjct: 153 HKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLC---HLAPEIIRQ 208
Query: 349 -----------VSTKCDVYSYGILLLETFSRKKP 371
S DV++ G + E +R+ P
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRN 225
L I+ +F+ +LG GSFG V+ TN I L+ + + + EC ++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEFKK-TNQFFAIKALKKDVVLMDDDVECTMVEK 69
Query: 226 ------VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 279
H L + + V+E++ G L + S + F D+ ++
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAEI 128
Query: 280 GLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK--LLGEGDDSLIQTKTM 337
L L++LH I++ DLK NILLD++ ++DFG+ K +LG+ +
Sbjct: 129 ILGLQFLHS----KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK----TNEFC 180
Query: 338 ATIGYMAPEGIVSTK----CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP 389
T Y+APE ++ K D +S+G+LL E + P + E L H + P
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP 236
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+K++ + L +++ + GLA + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 125 ------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 176
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 133/319 (41%), Gaps = 44/319 (13%)
Query: 155 LPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFV 214
LPL+ R I+ + +G G +G V+ G G VA+K+F E
Sbjct: 27 LPLLVQRTIA--------KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---A 74
Query: 215 SFNSECEVLRNV--RHRNLIKILS----GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD 268
S+ E E+ + V RH N++ ++ G + L+ ++ NGSL +L S LD
Sbjct: 75 SWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LD 132
Query: 269 ILERLNIMIDVGLALEYLHY----GHALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KL 323
L + L +LH I H DLK NIL+ +N ++D G++ K
Sbjct: 133 AKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192
Query: 324 LGEGDDSLIQTKT-MATIGYMAPEGIVST----------KCDVYSYGILLLETFSRKKPT 372
+ + ++ I T + T YM PE + + D+YS+G++L E R
Sbjct: 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252
Query: 373 NDLGEMSLK-HWVNQSLP--HKLAEVVDSNLVRREHSFSAKM---DCLLRIMNLALDCCM 426
+ E L H + S P + E+V +R SF + +CL ++ L +C
Sbjct: 253 GIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLR--PSFPNRWSSDECLRQMGKLMTECWA 310
Query: 427 ESPDERIHTTNAAAKLRKI 445
+P R+ L K+
Sbjct: 311 HNPASRLTALRVKKTLAKM 329
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 25/242 (10%)
Query: 181 LGIGSFGSVYK-GTLSDGTNVAIKIFNL--QLERTFVSFNSECEVLRNVRHRNLIKILSG 237
+G GS+G K SDG + K + E SE +LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 238 CSNLDFKAL--VLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGLALEYLHY---- 288
+ L V+E+ G L + +LD L +M + LAL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
GH ++H DLKP+N+ LD + DFG++++L D S +T + T YM+PE +
Sbjct: 134 GHT---VLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKT-FVGTPYYMSPEQM 188
Query: 349 ----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS----LPHKLAEVVDSNL 400
+ K D++S G LL E + P + L + + +P++ ++ ++ +
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEII 248
Query: 401 VR 402
R
Sbjct: 249 TR 250
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 25/257 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLERTFVSF-NSECEVLRNVRHRNL 231
F + +G GSFG V+KG + + T VAIKI +L+ + E VL +
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
K +++E++ GS L LD + I+ ++ L+YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKK 140
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI--- 348
IH D+K +N+LL E+ ++DFG++ L D + + + T +MAPE I
Sbjct: 141 ----IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 349 -VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP--------HKLAEVVDSN 399
+K D++S GI +E + P ++L M + + ++ P L E V++
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEAC 254
Query: 400 LVRREHSFSAKMDCLLR 416
L +E SF LL+
Sbjct: 255 L-NKEPSFRPTAKELLK 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 25/257 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLERTFVSF-NSECEVLRNVRHRNL 231
F + +G GSFG V+KG + + T VAIKI +L+ + E VL +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
K +++E++ GS L LD + I+ ++ L+YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKK 125
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI--- 348
IH D+K +N+LL E+ ++DFG++ L D + + + T +MAPE I
Sbjct: 126 ----IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 349 -VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP--------HKLAEVVDSN 399
+K D++S GI +E + P ++L M + + ++ P L E V++
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEAC 239
Query: 400 LVRREHSFSAKMDCLLR 416
L +E SF LL+
Sbjct: 240 L-NKEPSFRPTAKELLK 255
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 25/242 (10%)
Query: 181 LGIGSFGSVYK-GTLSDGTNVAIKIFNL--QLERTFVSFNSECEVLRNVRHRNLIKILSG 237
+G GS+G K SDG + K + E SE +LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 238 CSNLDFKAL--VLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGLALEYLHY---- 288
+ L V+E+ G L + +LD L +M + LAL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
GH ++H DLKP+N+ LD + DFG++++L D+ + T YM+PE +
Sbjct: 134 GHT---VLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPEQM 188
Query: 349 ----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS----LPHKLAEVVDSNL 400
+ K D++S G LL E + P + L + + +P++ ++ ++ +
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEII 248
Query: 401 VR 402
R
Sbjct: 249 TR 250
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTN-VAIKI-FNLQLERTFV--SFNSECEVLRNVRH 228
++F+ LG G FG+VY VA+K+ F Q+E+ V E E+ ++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
N++++ + + L+LE+ P G L K L F D IM ++ AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTF-DEQRTATIMEELADALMYCHG 141
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMAPEG 347
+IH D+KP N+LL ++DFG S ++ KTM T+ Y+ PE
Sbjct: 142 ----KKVIHRDIKPENLLLGLKGELKIADFGWSV-----HAPSLRRKTMCGTLDYLPPEM 192
Query: 348 IV----STKCDVYSYGILLLETFSRKKP 371
I + K D++ G+L E P
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 8/199 (4%)
Query: 187 GSVYKGTLSDGTNVAIKIFNLQLERTFVS--FNSECEVLRNVRHRNLIKILSGCSN--LD 242
G ++KG G ++ +K+ ++ T S FN EC LR H N++ +L C +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 243 FKALVLEFMPNGSLEKWLY-SHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLK 301
L+ + P GSL L+ N+ +D + + +D +LH L P L
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIP--RHALN 140
Query: 302 PSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTKCDVYSYGIL 361
++ +DE+ A +S + PE D +S+ +L
Sbjct: 141 SRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVL 200
Query: 362 LLETFSRKKPTNDLGEMSL 380
L E +R+ P DL +
Sbjct: 201 LWELVTREVPFADLSNXEI 219
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNV--AIKIFNLQLERTFVSFNSECEVL-RNVRH 228
T+ ++ +G+GS+ SV K + TN+ A+KI ++++ E E+L R +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKI----IDKSKRDPTEEIEILLRYGQH 75
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
N+I + + + +V E M G L + +F + E ++ + +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH- 133
Query: 289 GHALAPIIHCDLKPSNIL-LDEN---MVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
++H DLKPSNIL +DE+ + DFG +K L ++ L+ T T ++A
Sbjct: 134 ---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTPCY-TANFVA 188
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + CD++S G+LL + P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
Y+AP I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 169 QRATNEF---DECNLLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLERTFVSFNSECEVLR 224
Q A N F + +LG G FG V+K + G +A KI + + +E V+
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 225 NVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
+ H NLI++ + + LV+E++ G L + +Y L L+ + M + +
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIR 201
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSLIQTKTMATIGY 342
++H + I+H DLKP NIL + DFG+++ + + T +
Sbjct: 202 HMHQMY----ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGTPEF 254
Query: 343 MAPEGI----VSTKCDVYSYGIL 361
+APE + VS D++S G++
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 108/261 (41%), Gaps = 50/261 (19%)
Query: 199 NVAIKIFNLQLERTFV-SFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLE 257
VAIK NL+ +T + E + + H N++ + D LV++ + GS+
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV- 95
Query: 258 KWLYSHNYFLDILERL-----------------NIMIDVGLALEYLHYGHALAPIIHCDL 300
LDI++ + I+ +V LEYLH IH D+
Sbjct: 96 ---------LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ----IHRDV 142
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDD---SLIQTKTMATIGYMAPEGIVST-----K 352
K NILL E+ ++DFG+S L G D + ++ + T +MAPE + K
Sbjct: 143 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK 202
Query: 353 CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKL-AEVVDSNLVRREHSFSAKM 411
D++S+GI +E + P + M + Q+ P L V D ++++ KM
Sbjct: 203 ADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKM 262
Query: 412 DCLLRIMNLALDCCMESPDER 432
L C + P++R
Sbjct: 263 ISL---------CLQKDPEKR 274
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 175 FDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+D LG G+FG V++ + G K N + +E ++ + H LI
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ + L+LEF+ G L + + +Y + E +N M L+++H H+
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH-EHS-- 169
Query: 294 PIIHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSLIQTKTMATIGYMAPEGI--- 348
I+H D+KP NI+ + + V DFG++ L D +++ T AT + APE +
Sbjct: 170 -IVHLDIKPENIMCETKKASSVKIIDFGLATKLNP--DEIVKV-TTATAEFAAPEIVDRE 225
Query: 349 -VSTKCDVYSYGIL 361
V D+++ G+L
Sbjct: 226 PVGFYTDMWAIGVL 239
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 14/212 (6%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFN---LQLERTFVSFNSECEVL 223
I +F NLLG GSF VY+ ++ G VAIK+ + + +E ++
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 224 RNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
++H +++++ + + ++ LVLE NG + ++L + E + M + +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
YLH H I+H DL SN+LL NM ++DFG++ L + T Y+
Sbjct: 126 LYLH-SHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYI 179
Query: 344 APEGIVST----KCDVYSYGILLLETFSRKKP 371
+PE + + DV+S G + + P
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 20/220 (9%)
Query: 172 TNEFDECNLLGIGSFGSVY--KGTLSDGTNVAIKIFNLQLERTFVSFNS---ECEVLRNV 226
++ + +LG GSFG V K ++ G A+K+ + + + S E ++L+ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
H N+ K+ + + LV E G L + S F ++ + I+ V + Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 287 HYGHALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
H I+H DLKP N+LL+ ++ + DFG+S + S + T Y+
Sbjct: 143 HKN----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYI 195
Query: 344 APE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSL 380
APE G KCDV+S G++L S P N E +
Sbjct: 196 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI 235
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 108/261 (41%), Gaps = 50/261 (19%)
Query: 199 NVAIKIFNLQLERTFV-SFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLE 257
VAIK NL+ +T + E + + H N++ + D LV++ + GS+
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV- 100
Query: 258 KWLYSHNYFLDILERL-----------------NIMIDVGLALEYLHYGHALAPIIHCDL 300
LDI++ + I+ +V LEYLH IH D+
Sbjct: 101 ---------LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ----IHRDV 147
Query: 301 KPSNILLDENMVAHVSDFGISKLLGEGDD---SLIQTKTMATIGYMAPEGIVST-----K 352
K NILL E+ ++DFG+S L G D + ++ + T +MAPE + K
Sbjct: 148 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK 207
Query: 353 CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE-VVDSNLVRREHSFSAKM 411
D++S+GI +E + P + M + Q+ P L V D ++++ KM
Sbjct: 208 ADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKM 267
Query: 412 DCLLRIMNLALDCCMESPDER 432
L C + P++R
Sbjct: 268 ISL---------CLQKDPEKR 279
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 111
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 171 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 226
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAE 249
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 13/220 (5%)
Query: 181 LGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
+G GS G V T G VA+K +L+ ++ +E ++R+ H N++ + S
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
D +V+EF+ G+L + +H ++ + + + V AL YLH +IH D
Sbjct: 113 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIATVCLSVLRALSYLHN----QGVIHRD 166
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDV 355
+K +ILL + +SDFG + + + + + T +MAPE I T+ D+
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSK--EVPKRKXLVGTPYWMAPEVISRLPYGTEVDI 224
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEV 395
+S GI+++E + P + + + SLP ++ ++
Sbjct: 225 WSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDL 264
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN----VAIK-IFNLQLERTFVSFNSECEVLRNVRHR 229
+D ++LG G+F V L++ VAIK I LE S +E VL ++H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 76
Query: 230 NLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYG 289
N++ + + L+++ + G L + ++ + + ++ V A++YLH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIFQVLDAVKYLHD- 134
Query: 290 HALAPIIHCDLKPSNIL---LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
I+H DLKP N+L LDE+ +SDFG+SK+ G S++ T T GY+APE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAPE 188
Query: 347 GIV----STKCDVYSYGIL 361
+ S D +S G++
Sbjct: 189 VLAQKPYSKAVDCWSIGVI 207
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 26/232 (11%)
Query: 149 SDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNL 207
SDEE L L +S D ++ F++ +G G+ G+VY ++ G VAI+ NL
Sbjct: 2 SDEEILEKLRII--VSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNL 56
Query: 208 QLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFL 267
Q + +E V+R ++ N++ L D +V+E++ GSL + +
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CM 114
Query: 268 DILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGE 326
D + + + ALE+LH +IH ++K NILL + ++DFG +++ E
Sbjct: 115 DEGQIAAVCRECLQALEFLHSNQ----VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE 170
Query: 327 GDDSLIQTKTMATIG---YMAPEGIV----STKCDVYSYGILLLETFSRKKP 371
Q+K +G +MAPE + K D++S GI+ +E + P
Sbjct: 171 ------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIK----IFNL--QLERTFVSFNSECEVLRN 225
+E++ +G G++G V G VAIK F++ +RT E ++L++
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL----RELKILKH 110
Query: 226 VRHRNLIKI----LSGCSNLDFKAL--VLEFMPNGSLEKWLYSHN--------YFLDILE 271
+H N+I I +FK++ VL+ M L + ++S YFL L
Sbjct: 111 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL 169
Query: 272 RLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL--GEGDD 329
R L+Y+H A +IH DLKPSN+L++EN + DFG+++ L +
Sbjct: 170 R---------GLKYMHS----AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH 216
Query: 330 SLIQTKTMATIGYMAPEGIVS-----TKCDVYSYGILLLETFSRKK 370
T+ +AT Y APE ++S D++S G + E +R++
Sbjct: 217 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+ ++ + L +++ + GLA + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 127 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 178
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIK----IFNL--QLERTFVSFNSECEVLRN 225
+E++ +G G++G V G VAIK F++ +RT E ++L++
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL----RELKILKH 109
Query: 226 VRHRNLIKI----LSGCSNLDFKAL--VLEFMPNGSLEKWLYSHN--------YFLDILE 271
+H N+I I +FK++ VL+ M L + ++S YFL L
Sbjct: 110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL 168
Query: 272 RLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL--GEGDD 329
R L+Y+H A +IH DLKPSN+L++EN + DFG+++ L +
Sbjct: 169 R---------GLKYMHS----AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH 215
Query: 330 SLIQTKTMATIGYMAPEGIVS-----TKCDVYSYGILLLETFSRKK 370
T+ +AT Y APE ++S D++S G + E +R++
Sbjct: 216 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 96
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 156 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 211
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAE 234
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 85
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 145 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 200
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAE 223
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 89
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 149 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 204
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAE 227
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 179 NLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-HRNLIKILS 236
++LG G+ V L A+KI Q E E+L + HRN+++++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPII 296
D LV E M GS+ ++ +F + LE ++ DV AL++LH I
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNE-LEASVVVQDVASALDFLHN----KGIA 133
Query: 297 HCDLKPSNILLDE-NMVAHVS--DFGI-SKLLGEGDDSLIQTKTMAT----IGYMAPE-- 346
H DLKP NIL + N V+ V DFG+ S + GD S I T + T YMAPE
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 347 -------GIVSTKCDVYSYGILLLETFSRKKP 371
I +CD++S G++L S P
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 44/230 (19%)
Query: 170 RATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIK---IFNLQLERTFVSFNSECEVLRN 225
R +F+ LG G FG V++ D N AIK + N +L R V E + L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM--REVKALAK 59
Query: 226 VRH------------RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILER- 272
+ H +N + L S + + ++ +L+ W+ N I ER
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM---NGRCTIEERE 116
Query: 273 ----LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L+I + + A+E+LH ++H DLKPSNI + V V DFG+ + + +
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKG----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 329 DSLI----------QTKTMATIGYMAPEGI----VSTKCDVYSYGILLLE 364
+ T + T YM+PE I S K D++S G++L E
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 111
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 171 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 226
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAE 249
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 89
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 149 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 204
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAE 227
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN----VAIK-IFNLQLERTFVSFNSECEVLRNVRHR 229
+D ++LG G+F V L++ VAIK I LE S +E VL ++H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 230 NLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYG 289
N++ + + L+++ + G L + ++ + + ++ V A++YLH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIFQVLDAVKYLHD- 134
Query: 290 HALAPIIHCDLKPSNIL---LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
I+H DLKP N+L LDE+ +SDFG+SK+ G S++ T T GY+APE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAPE 188
Query: 347 GIV----STKCDVYSYGIL 361
+ S D +S G++
Sbjct: 189 VLAQKPYSKAVDCWSIGVI 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN----VAIK-IFNLQLERTFVSFNSECEVLRNVRHR 229
+D ++LG G+F V L++ VAIK I LE S +E VL ++H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 230 NLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYG 289
N++ + + L+++ + G L + ++ + + ++ V A++YLH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIFQVLDAVKYLH-- 133
Query: 290 HALAPIIHCDLKPSNIL---LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
I+H DLKP N+L LDE+ +SDFG+SK+ G S++ T T GY+APE
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAPE 188
Query: 347 GIV----STKCDVYSYGIL 361
+ S D +S G++
Sbjct: 189 VLAQKPYSKAVDCWSIGVI 207
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 234 IL-----SG-CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ SG ++ + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 137 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 192
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAE 215
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+ ++ + L +++ + GLA + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 124 ------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 175
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 33/162 (20%)
Query: 218 SECEVLRNVRHRNLIKILSGCS--NLDFKALVLEFMPNGSLEKWL--------YSHNYFL 267
E +L+ + H N++K++ N D +V E + G + + + YF
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ 144
Query: 268 DILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327
D+++ +EYLHY IIH D+KPSN+L+ E+ ++DFG+S +G
Sbjct: 145 DLIK----------GIEYLHY----QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KG 189
Query: 328 DDSLIQTKTMATIGYMAPEGIVSTK-------CDVYSYGILL 362
D+L+ + T+ T +MAPE + T+ DV++ G+ L
Sbjct: 190 SDALL-SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 105
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 165 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 220
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAE 243
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 113
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 173 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 228
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAE 251
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 137 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 192
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAE 215
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 137 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 192
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAE 215
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 115
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 175 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 230
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAE 253
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 78
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 138 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 193
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAE 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 50/262 (19%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ-------LERTFVSFNSECEVLR 224
++FD LG GSFG V + G + A+KI + Q +E T +E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL----NEKRILQ 96
Query: 225 NVRHRNLIKI---LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
V L+K+ SNL +V+E++ G + L F + R + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNL---YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
EYLH +I+ DLKP N+L+D+ V+DFG +K ++ +T G
Sbjct: 153 TFEYLHS----LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 342 ---YMAPEGIVS----TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394
+APE I+S D ++ G+L+ E + P + +Q P ++ E
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP----------FFADQ--PIQIYE 248
Query: 395 VVDSNLVRREHSFSAKMDCLLR 416
+ S VR FS+ + LLR
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLR 270
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 22/236 (9%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRN 225
L I+ +F +LG GSFG V+ TN I L+ + + + EC ++
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKK-TNQFFAIKALKKDVVLMDDDVECTMVEK 68
Query: 226 ------VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 279
H L + + V+E++ G L + S + F D+ ++
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAEI 127
Query: 280 GLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK--LLGEGDDSLIQTKTM 337
L L++LH I++ DLK NILLD++ ++DFG+ K +LG+ +
Sbjct: 128 ILGLQFLHS----KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF----C 179
Query: 338 ATIGYMAPEGIVSTK----CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP 389
T Y+APE ++ K D +S+G+LL E + P + E L H + P
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 81
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 141 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 196
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAE 219
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 90
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 150 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 205
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAE 228
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+ ++ + L +++ + GLA + H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 127 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 178
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN----VAIK-IFNLQLERTFVSFNSECEVLRNVRHR 229
+D ++LG G+F V L++ VAIK I LE S +E VL ++H
Sbjct: 20 YDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 230 NLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYG 289
N++ + + L+++ + G L + ++ + + ++ V A++YLH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIFQVLDAVKYLHD- 134
Query: 290 HALAPIIHCDLKPSNIL---LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
I+H DLKP N+L LDE+ +SDFG+SK+ G S++ T T GY+APE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAPE 188
Query: 347 GIV----STKCDVYSYGIL 361
+ S D +S G++
Sbjct: 189 VLAQKPYSKAVDCWSIGVI 207
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 156
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 216 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 271
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAE 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV EF+ + L+ ++ + L +++ + GLA + H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
++H DLKP N+L++ ++DFG+++ G + + T+ Y APE +
Sbjct: 126 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 177
Query: 349 V-----STKCDVYSYGILLLETFSRK 369
+ ST D++S G + E +R+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 77
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 137 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 192
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAE 215
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 171 ATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIK---IFNLQLERTFVSFNSECEV---- 222
AT+ ++ +G+G++G+VYK G VA+K + N + ++ EV
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 223 -LRNVRHRNLIKILSGC----SNLDFK-ALVLEFMPNGSLEKWL-YSHNYFLDILERLNI 275
L H N+++++ C ++ + K LV E + + L +L + L ++
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
M L++LH I+H DLKP NIL+ ++DFG++++ + T
Sbjct: 126 MRQFLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALTP 178
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFSRK 369
+ T+ Y APE ++ +T D++S G + E F RK
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK LQ +R N E +++R + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK---NRELQIMRKLDHCNIVR 82
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 142 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 197
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAE 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 28/210 (13%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHY 288
+K+L + LV E + + L+K++ + L +++ + GLA + H
Sbjct: 68 VKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT----MATIGYMA 344
++H DLKP N+L++ ++DFG+++ G + +T + T+ Y A
Sbjct: 127 ------VLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYRA 174
Query: 345 PEGIV-----STKCDVYSYGILLLETFSRK 369
PE ++ ST D++S G + E +R+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 171 ATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVR 227
AT+ ++ +G+G++G+VYK G VA+K + E +S E +LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 228 ---HRNLIKILSGC----SNLDFK-ALVLEFMPNGSLEKWL-YSHNYFLDILERLNIMID 278
H N+++++ C ++ + K LV E + + L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
L++LH I+H DLKP NIL+ ++DFG++++ + +
Sbjct: 121 FLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALAPVVV 173
Query: 339 TIGYMAPEGIV----STKCDVYSYGILLLETFSRK 369
T+ Y APE ++ +T D++S G + E F RK
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
F + +G G++G VYK G VA+K L E V + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 232 IKILSGCSNLDFKALVLE--------FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
+K+L + LV E FM +L L +++ + GLA
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALT------GIPLPLIKSYLFQLLQGLAF 117
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
+ H ++H DLKP N+L++ ++DFG+++ G + T + T+ Y
Sbjct: 118 CHSHR------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYR 169
Query: 344 APEGIV-----STKCDVYSYGILLLETFSRK 369
APE ++ ST D++S G + E +R+
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK + + F N E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 137 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 192
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAE 215
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 37/275 (13%)
Query: 175 FDECNLLGIGSFGSVY---KGTLSD-GTNVAIKIFN----LQLERTFVSFNSECEVLRNV 226
F+ +LG G++G V+ K + D G A+K+ +Q +T +E +VL ++
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 227 RHRNLIKILSGCSNLDFK-ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI-DVGLALE 284
R + L + K L+L+++ G L L F + + I + ++ LALE
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE--HEVQIYVGEIVLALE 173
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
+LH II+ D+K NILLD N ++DFG+SK D++ TI YMA
Sbjct: 174 HLHK----LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETERAYDFCGTIEYMA 228
Query: 345 PEGIVS------TKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
P+ + D +S G+L+ E + P GE + + +++
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR------------ 276
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERI 433
+++ E + +M L + +L M+ P +R+
Sbjct: 277 RILKSEPPYPQEMSALAK--DLIQRLLMKDPKKRL 309
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 171 ATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVR 227
AT+ ++ +G+G++G+VYK G VA+K + E +S E +LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 228 ---HRNLIKILSGC----SNLDFK-ALVLEFMPNGSLEKWL-YSHNYFLDILERLNIMID 278
H N+++++ C ++ + K LV E + + L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
L++LH I+H DLKP NIL+ ++DFG++++ + +
Sbjct: 121 FLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALDPVVV 173
Query: 339 TIGYMAPEGIV----STKCDVYSYGILLLETFSRK 369
T+ Y APE ++ +T D++S G + E F RK
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 33/230 (14%)
Query: 161 RRISYLDIQRATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNS- 218
+RI Y +++F +LLG G++G V T G VAIK ++ + +
Sbjct: 3 KRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTL 57
Query: 219 -ECEVLRNVRHRNLIKILS-----GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILER 272
E ++L++ +H N+I I + N + ++ E M L + + + D ++
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQY 116
Query: 273 LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE--GDDS 330
+ A++ LH + +IH DLKPSN+L++ N V DFG+++++ E D+S
Sbjct: 117 F--IYQTLRAVKVLHGSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 331 LI------QTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFSRK 369
T+ +AT Y APE ++ S DV+S G +L E F R+
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRN 230
++F++ + LG G+ G V+K + G +A K+ +L+++ + E +VL
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGLALEYLHYG 289
++ + ++ +E M GSL++ L + IL +++I + GL YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 185
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+KPSNIL++ + DFG+S +L+ +S + T++ YM+PE +
Sbjct: 186 HK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPERL 237
Query: 349 VST----KCDVYSYGILLLETFSRKKP 371
T + D++S G+ L+E + P
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 23/211 (10%)
Query: 173 NEFDECNLLGIGSFGSVY----KGTLSDGTNVAIKIFNLQL---ERTFVSFNSECEVLRN 225
N+FD LLG G+FG V K T G A+KI ++ + +E VL+N
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
RH L + D V+E+ G L L F + R ++ ALEY
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 123
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMA 344
LH +++ D+K N++LD++ ++DFG+ K EG KT T Y+A
Sbjct: 124 LHS----RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLA 176
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + D + G+++ E + P
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK + + F N E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 137 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 192
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAE 215
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 23/218 (10%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVY----KGTLSDGTNVAIKIFNLQL---ERTFVSFNS 218
+D + N+FD LLG G+FG V K T G A+KI ++ + +
Sbjct: 3 MDPKVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVT 59
Query: 219 ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
E VL+N RH L + D V+E+ G L L F + R +
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 118
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSLIQTKTM 337
+ ALEYLH +++ D+K N++LD++ ++DFG+ K EG D
Sbjct: 119 IVSALEYLHS----RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFC 171
Query: 338 ATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKP 371
T Y+APE + D + G+++ E + P
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 168 IQRATNEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVL 223
+Q ++D ++G G+FG V +K + + F + F E +++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 224 RNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--IMIDVGL 281
++++ + + +V+E+MP G L + NY D+ E+ +V L
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNY--DVPEKWAKFYTAEVVL 185
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-MATI 340
AL+ +H +IH D+KP N+LLD++ ++DFG + E ++ T + T
Sbjct: 186 ALDAIHS----MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET--GMVHCDTAVGTP 239
Query: 341 GYMAPE--------GIVSTKCDVYSYGILLLETFSRKKP 371
Y++PE G +CD +S G+ L E P
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
+ + ++G GSFG VY+ L D G VAIK + + F N E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 234 I----LSGCSNLD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ S D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 288 YGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
Y H+ I H D+KP N+LLD + V + DFG +K L G+ ++ + + Y APE
Sbjct: 137 YIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 192
Query: 347 GIV-----STKCDVYSYGILLLE 364
I ++ DV+S G +L E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAE 215
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 33/230 (14%)
Query: 161 RRISYLDIQRATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNS- 218
+RI Y +++F +LLG G++G V T G VAIK ++ + +
Sbjct: 3 KRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTL 57
Query: 219 -ECEVLRNVRHRNLIKILS-----GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILER 272
E ++L++ +H N+I I + N + ++ E M L + + + D ++
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQY 116
Query: 273 LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE--GDDS 330
+ A++ LH + +IH DLKPSN+L++ N V DFG+++++ E D+S
Sbjct: 117 F--IYQTLRAVKVLHGSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 331 LI------QTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFSRK 369
T+ +AT Y APE ++ S DV+S G +L E F R+
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 23/211 (10%)
Query: 173 NEFDECNLLGIGSFGSVY----KGTLSDGTNVAIKIFNLQL---ERTFVSFNSECEVLRN 225
N+FD LLG G+FG V K T G A+KI ++ + +E VL+N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
RH L + D V+E+ G L L F + R ++ ALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMA 344
LH +++ D+K N++LD++ ++DFG+ K EG KT T Y+A
Sbjct: 121 LHS----RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLA 173
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + D + G+++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 180 LLGIGSFGSVY--KGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSG 237
+LG G+F V+ K L+ G A+K S +E VL+ ++H N++ +
Sbjct: 16 VLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
+ LV++ + G L + + + L ++ V A++YLH I+H
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQQVLSAVKYLHEN----GIVH 129
Query: 298 CDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----S 350
DLKP N+L +EN ++DFG+SK+ G I + T GY+APE + S
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYS 185
Query: 351 TKCDVYSYGIL 361
D +S G++
Sbjct: 186 KAVDCWSIGVI 196
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRN 230
++F++ + LG G+ G V+K + G +A K+ +L+++ + E +VL
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGLALEYLHYG 289
++ + ++ +E M GSL++ L + IL +++I + GL YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 150
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+KPSNIL++ + DFG+S +L+ +S + T++ YM+PE +
Sbjct: 151 HK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPERL 202
Query: 349 VST----KCDVYSYGILLLETFSRKKP 371
T + D++S G+ L+E + P
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 171 ATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVR 227
AT+ ++ +G+G++G+VYK G VA+K + E +S E +LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 228 ---HRNLIKILSGC----SNLDFK-ALVLEFMPNGSLEKWL-YSHNYFLDILERLNIMID 278
H N+++++ C ++ + K LV E + + L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMA 338
L++LH I+H DLKP NIL+ ++DFG++++ + +
Sbjct: 121 FLRGLDFLHANC----IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALFPVVV 173
Query: 339 TIGYMAPEGIV----STKCDVYSYGILLLETFSRK 369
T+ Y APE ++ +T D++S G + E F RK
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 23/211 (10%)
Query: 173 NEFDECNLLGIGSFGSVY----KGTLSDGTNVAIKIFNLQL---ERTFVSFNSECEVLRN 225
N+FD LLG G+FG V K T G A+KI ++ + +E VL+N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
RH L + D V+E+ G L L F + R ++ ALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMA 344
LH +++ D+K N++LD++ ++DFG+ K EG KT T Y+A
Sbjct: 121 LHS----RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLA 173
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + D + G+++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 160 WRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNS 218
W+ + L+I N+F ++G G FG VY +D G A+K L++ +
Sbjct: 177 WKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC----LDKKRIKMK- 230
Query: 219 ECEVLRNVRHRNLIKILSG-------CSNLDFK-----ALVLEFMPNGSLEKWLYSHNYF 266
+ E L + R ++ ++S C + F + +L+ M G L L H F
Sbjct: 231 QGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 289
Query: 267 LDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326
+ R ++ L LE++H +++ DLKP+NILLDE+ +SD G++ +
Sbjct: 290 SEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344
Query: 327 GDDSLIQTKTMATIGYMAPE----GIV-STKCDVYSYGILLLETFSRKKP 371
++ T GYMAPE G+ + D +S G +L + P
Sbjct: 345 KKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 160 WRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNS 218
W+ + L+I N+F ++G G FG VY +D G A+K L++ +
Sbjct: 176 WKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC----LDKKRIKMK- 229
Query: 219 ECEVLRNVRHRNLIKILSG-------CSNLDFK-----ALVLEFMPNGSLEKWLYSHNYF 266
+ E L + R ++ ++S C + F + +L+ M G L L H F
Sbjct: 230 QGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 288
Query: 267 LDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326
+ R ++ L LE++H +++ DLKP+NILLDE+ +SD G++ +
Sbjct: 289 SEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSK 343
Query: 327 GDDSLIQTKTMATIGYMAPE----GIV-STKCDVYSYGILLLETFSRKKP 371
++ T GYMAPE G+ + D +S G +L + P
Sbjct: 344 KKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRN 230
++F++ + LG G+ G V+K + G +A K+ +L+++ + E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGLALEYLHYG 289
++ + ++ +E M GSL++ L + IL +++I + GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 123
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+KPSNIL++ + DFG+S +L+ +S + T++ YM+PE +
Sbjct: 124 HK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPERL 175
Query: 349 VST----KCDVYSYGILLLETFSRKKP 371
T + D++S G+ L+E + P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVL-RNVRH 228
T+ ++ +G+GS+ SV K + TN A+KI ++++ E E+L R +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKI----IDKSKRDPTEEIEILLRYGQH 75
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
N+I + + + +V E G L + +F + E ++ + +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH- 133
Query: 289 GHALAPIIHCDLKPSNIL-LDEN---MVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
++H DLKPSNIL +DE+ + DFG +K L ++ L+ T T ++A
Sbjct: 134 ---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLXTPCY-TANFVA 188
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + CD++S G+LL + P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 18/240 (7%)
Query: 181 LGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
+G GS G V T+ S G VA+K +L+ ++ +E ++R+ +H N++++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299
D +V+EF+ G+L + +H ++ + + + V AL LH +IH D
Sbjct: 219 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLHAQG----VIHRD 272
Query: 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDV 355
+K +ILL + +SDFG + + + + + T +MAPE I + D+
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPEVDI 330
Query: 356 YSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415
+S GI+++E + P + + + +LP +L NL + S +D LL
Sbjct: 331 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-----KNLHKVSPSLKGFLDRLL 385
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 173 NEFDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRN 230
++F+ + LG G+ G V K G +A K+ +L+++ + E +VL
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGLALEYLHYG 289
++ + ++ +E M GSL++ L + IL +++I + GLA YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA--YLREK 133
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+KPSNIL++ + DFG+S +L+ +S + T++ YMAPE +
Sbjct: 134 HQ---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMAPERL 185
Query: 349 VST----KCDVYSYGILLLETFSRKKP 371
T + D++S G+ L+E + P
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 160 WRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNS 218
W+ + L+I N+F ++G G FG VY +D G A+K L++ +
Sbjct: 177 WKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC----LDKKRIKMK- 230
Query: 219 ECEVLRNVRHRNLIKILSG-------CSNLDFK-----ALVLEFMPNGSLEKWLYSHNYF 266
+ E L + R ++ ++S C + F + +L+ M G L L H F
Sbjct: 231 QGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 289
Query: 267 LDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326
+ R ++ L LE++H +++ DLKP+NILLDE+ +SD G++ +
Sbjct: 290 SEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344
Query: 327 GDDSLIQTKTMATIGYMAPE----GIV-STKCDVYSYGILLLETFSRKKP 371
++ T GYMAPE G+ + D +S G +L + P
Sbjct: 345 KKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 160 WRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNS 218
W+ + L+I N+F ++G G FG VY +D G A+K L++ +
Sbjct: 177 WKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC----LDKKRIKMK- 230
Query: 219 ECEVLRNVRHRNLIKILSG-------CSNLDFK-----ALVLEFMPNGSLEKWLYSHNYF 266
+ E L + R ++ ++S C + F + +L+ M G L L H F
Sbjct: 231 QGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 289
Query: 267 LDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326
+ R ++ L LE++H +++ DLKP+NILLDE+ +SD G++ +
Sbjct: 290 SEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344
Query: 327 GDDSLIQTKTMATIGYMAPE----GIV-STKCDVYSYGILLLETFSRKKP 371
++ T GYMAPE G+ + D +S G +L + P
Sbjct: 345 KKPH----ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 24/243 (9%)
Query: 181 LGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
+G GS G V T+ S G VA+K +L+ ++ +E ++R+ +H N++++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--IMIDVGLA-LEYLHYGHALAPII 296
D +V+EF+ G+L + +H R+N + V LA L+ L HA +I
Sbjct: 97 VGDELWVVMEFLEGGALTD-IVTHT-------RMNEEQIAAVCLAVLQALSVLHAQG-VI 147
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTK 352
H D+K +ILL + +SDFG + + + + + T +MAPE I +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 353 CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMD 412
D++S GI+++E + P + + + +LP +L NL + S +D
Sbjct: 206 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-----KNLHKVSPSLKGFLD 260
Query: 413 CLL 415
LL
Sbjct: 261 RLL 263
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 178 CNLLGIGSFGSVYKGTLSD-GTNVAIKIFN-LQLERTFVSFNSECEVLRNVRHRNLIKIL 235
++LG G+ +V++G G AIK+FN + R E EVL+ + H+N++K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 236 S--GCSNLDFKALVLEFMPNGSLEKWLY--SHNYFLDILERLNIMIDVGLALEYLHYGHA 291
+ + K L++EF P GSL L S+ Y L E L ++ DV + +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-- 131
Query: 292 LAPIIHCDLKPSNILL----DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG 347
I+H ++KP NI+ D V ++DFG ++ L E D+ + T Y+ P
Sbjct: 132 --GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFV--SLYGTEEYLHP-- 184
Query: 348 IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLK--HWVNQSLPHKLAE 394
D+Y +L + + T DL + + H SLP + E
Sbjct: 185 ------DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 24/243 (9%)
Query: 181 LGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
+G GS G V T+ S G VA+K +L+ ++ +E ++R+ +H N++++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--IMIDVGLA-LEYLHYGHALAPII 296
D +V+EF+ G+L + +H R+N + V LA L+ L HA +I
Sbjct: 99 VGDELWVVMEFLEGGALTD-IVTHT-------RMNEEQIAAVCLAVLQALSVLHAQG-VI 149
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTK 352
H D+K +ILL + +SDFG + + + + + T +MAPE I +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 353 CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMD 412
D++S GI+++E + P + + + +LP +L NL + S +D
Sbjct: 208 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-----KNLHKVSPSLKGFLD 262
Query: 413 CLL 415
LL
Sbjct: 263 RLL 265
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 179 NLLGIGSFGSVYKGTLSD-GTNVAIKIFN-LQLERTFVSFNSECEVLRNVRHRNLIKILS 236
++LG G+ +V++G G AIK+FN + R E EVL+ + H+N++K+ +
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 237 --GCSNLDFKALVLEFMPNGSLEKWLY--SHNYFLDILERLNIMIDVGLALEYLHYGHAL 292
+ K L++EF P GSL L S+ Y L E L ++ DV + +L
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN--- 131
Query: 293 APIIHCDLKPSNILL----DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI 348
I+H ++KP NI+ D V ++DFG ++ L E D+ + T Y+ P
Sbjct: 132 -GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVX--LYGTEEYLHP--- 184
Query: 349 VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLK--HWVNQSLPHKLAE 394
D+Y +L + + T DL + + H SLP + E
Sbjct: 185 -----DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 114/230 (49%), Gaps = 23/230 (10%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRN 230
++F++ + LG G+ G V+K + G +A K+ +L+++ + E +VL
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGLALEYLHYG 289
++ + ++ +E M GSL++ L + IL +++I + GL YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 142
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+KPSNIL++ + DFG+S +L+ +S + T++ YM+PE +
Sbjct: 143 HK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPERL 194
Query: 349 VST----KCDVYSYGILLLETFSRKKPT-NDLGEMS----LKHWVNQSLP 389
T + D++S G+ L+E + P + G M+ L + VN+ P
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPP 244
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRN 230
++F++ + LG G+ G V+K + G +A K+ +L+++ + E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGLALEYLHYG 289
++ + ++ +E M GSL++ L + IL +++I + GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 123
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+KPSNIL++ + DFG+S +L+ +S + T++ YM+PE +
Sbjct: 124 HK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPERL 175
Query: 349 VST----KCDVYSYGILLLETFSRKKP 371
T + D++S G+ L+E + P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRN 230
++F++ + LG G+ G V+K + G +A K+ +L+++ + E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGLALEYLHYG 289
++ + ++ +E M GSL++ L + IL +++I + GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 123
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+KPSNIL++ + DFG+S +L+ +S + T++ YM+PE +
Sbjct: 124 HK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPERL 175
Query: 349 VST----KCDVYSYGILLLETFSRKKP 371
T + D++S G+ L+E + P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 179 NLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVS----FNSECEVLRNVRHRNLIKI 234
N +G GS+G V K + GT I+ ++ + FV F E E+++++ H N+I++
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTR--IRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 71
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ LV+E G L + + F + + IM DV A+ Y H +
Sbjct: 72 YETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARIMKDVLSAVAYCHKLN---- 126
Query: 295 IIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAP---EGI 348
+ H DLKP N L + + DFG++ G +++TK + T Y++P EG+
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTK-VGTPYYVSPQVLEGL 183
Query: 349 VSTKCDVYSYGILL 362
+CD +S G+++
Sbjct: 184 YGPECDEWSAGVMM 197
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 24/243 (9%)
Query: 181 LGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
+G GS G V T+ S G VA+K +L+ ++ +E ++R+ +H N++++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--IMIDVGLA-LEYLHYGHALAPII 296
D +V+EF+ G+L + +H R+N + V LA L+ L HA +I
Sbjct: 142 VGDELWVVMEFLEGGALTD-IVTHT-------RMNEEQIAAVCLAVLQALSVLHAQG-VI 192
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTK 352
H D+K +ILL + +SDFG + + + + + T +MAPE I +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 353 CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMD 412
D++S GI+++E + P + + + +LP +L NL + S +D
Sbjct: 251 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-----KNLHKVSPSLKGFLD 305
Query: 413 CLL 415
LL
Sbjct: 306 RLL 308
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 23/211 (10%)
Query: 173 NEFDECNLLGIGSFGSVY----KGTLSDGTNVAIKIFNLQL---ERTFVSFNSECEVLRN 225
N+FD LLG G+FG V K T G A+KI ++ + +E VL+N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
RH L + D V+E+ G L L F + R ++ ALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSLIQTKTMATIGYMA 344
LH +++ D+K N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 121 LHS----RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLA 173
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + D + G+++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVY--KGTLSDGTNVAIKIFNLQLERTFVSFNS----- 218
L Q ++ + LG G++G V K L+ G AIKI ++++ V+ S
Sbjct: 14 LYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKI----IKKSSVTTTSNSGAL 68
Query: 219 --ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM 276
E VL+ + H N++K+ + LV+E G L + F ++ + IM
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIM 127
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSLIQ 333
V YLH + I+H DLKP N+LL+ + + + DFG+S G
Sbjct: 128 KQVLSGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---M 180
Query: 334 TKTMATIGYMAPEGI---VSTKCDVYSYGILL 362
+ + T Y+APE + KCDV+S G++L
Sbjct: 181 KERLGTAYYIAPEVLRKKYDEKCDVWSCGVIL 212
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 109
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 110 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 168
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 43/233 (18%)
Query: 174 EFDECNL-----LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFV------SFNSECE 221
EF NL LG G+FG V + T G A+ +++ ++ + SE +
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 222 VLRNV-RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLY------------------- 261
++ ++ +H N++ +L C++ ++ E+ G L +L
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG 146
Query: 262 ---SHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDF 318
L++ + L+ V + +L A IH D+ N+LL VA + DF
Sbjct: 147 LDKEDGRPLELRDLLHFSSQVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDF 202
Query: 319 GISKLLGEGDDSLIQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
G+++ + + +++ + +MAPE I + + DV+SYGILL E FS
Sbjct: 203 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 24/243 (9%)
Query: 181 LGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
+G GS G V T+ S G VA+K +L+ ++ +E ++R+ +H N++++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--IMIDVGLA-LEYLHYGHALAPII 296
D +V+EF+ G+L + +H R+N + V LA L+ L HA +I
Sbjct: 88 VGDELWVVMEFLEGGALTD-IVTHT-------RMNEEQIAAVCLAVLQALSVLHAQG-VI 138
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTK 352
H D+K +ILL + +SDFG + + + + + T +MAPE I +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 353 CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMD 412
D++S GI+++E + P + + + +LP +L NL + S +D
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-----KNLHKVSPSLKGFLD 251
Query: 413 CLL 415
LL
Sbjct: 252 RLL 254
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 23/211 (10%)
Query: 173 NEFDECNLLGIGSFGSVY----KGTLSDGTNVAIKIFNLQL---ERTFVSFNSECEVLRN 225
N+FD LLG G+FG V K T G A+KI ++ + +E VL+N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
RH L + D V+E+ G L L F + R ++ ALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSLIQTKTMATIGYMA 344
LH +++ D+K N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 121 LHS----RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLA 173
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + D + G+++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 179 NLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV-RHRNLIKILSG 237
++LG G+ G++ + D +VA+K L F + E ++LR H N+I+
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVIRYFCT 86
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
+ F+ + +E +L++++ ++ LE + ++ L +LH + I+H
Sbjct: 87 EKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN----IVH 141
Query: 298 CDLKPSNILLD-----ENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMAPEGIVST 351
DLKP NIL+ + A +SDFG+ K L G S + + T G++APE ++S
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE-MLSE 200
Query: 352 KC--------DVYSYGILLLETFS 367
C D++S G + S
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 179 NLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-HRNLIKILS 236
++LG G+ V L A+KI Q E E+L + HRN+++++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPII 296
D LV E M GS+ ++ +F + LE ++ DV AL++LH I
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNE-LEASVVVQDVASALDFLHN----KGIA 133
Query: 297 HCDLKPSNILLDE-NMVAHVS--DFGI-SKLLGEGDDSLIQTKTMAT----IGYMAPE-- 346
H DLKP NIL + N V+ V DF + S + GD S I T + T YMAPE
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 347 -------GIVSTKCDVYSYGILLLETFSRKKP 371
I +CD++S G++L S P
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRN 230
++F++ + LG G+ G V+K + G +A K+ +L+++ + E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGLALEYLHYG 289
++ + ++ +E M GSL++ L + IL +++I + GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 123
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+KPSNIL++ + DFG+S +L+ +S + T++ YM+PE +
Sbjct: 124 HK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPERL 175
Query: 349 ----VSTKCDVYSYGILLLETFSRKKP 371
S + D++S G+ L+E + P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 18/207 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS-FNSECEVLRNVRHRN 230
++F++ + LG G+ G V+K + G +A K+ +L+++ + E +VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLD-ILERLNIMIDVGLALEYLHYG 289
++ + ++ +E M GSL++ L + IL +++I + GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 123
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGYMAPEGI 348
H I+H D+KPSNIL++ + DFG+S +L+ +S + T++ YM+PE +
Sbjct: 124 HK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSPERL 175
Query: 349 ----VSTKCDVYSYGILLLETFSRKKP 371
S + D++S G+ L+E + P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 179 NLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVS----FNSECEVLRNVRHRNLIKI 234
N +G GS+G V K + GT I+ ++ + FV F E E+++++ H N+I++
Sbjct: 32 NTIGRGSWGEV-KIAVQKGTR--IRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 88
Query: 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294
+ LV+E G L + + F + + IM DV A+ Y H +
Sbjct: 89 YETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARIMKDVLSAVAYCHKLN---- 143
Query: 295 IIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAP---EGI 348
+ H DLKP N L + + DFG++ G +++TK + T Y++P EG+
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTK-VGTPYYVSPQVLEGL 200
Query: 349 VSTKCDVYSYGILL 362
+CD +S G+++
Sbjct: 201 YGPECDEWSAGVMM 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 23/211 (10%)
Query: 173 NEFDECNLLGIGSFGSVY----KGTLSDGTNVAIKIFNLQL---ERTFVSFNSECEVLRN 225
N+FD LLG G+FG V K T G A+KI ++ + +E VL+N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
RH L + D V+E+ G L L F + R ++ ALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSLIQTKTMATIGYMA 344
LH +++ D+K N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 121 LHS----RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLA 173
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + D + G+++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNV-- 226
R T EF E +G G FGSV+K DG AIK L + N+ EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 227 -RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNY----FLDILERLNIMIDVGL 281
+H ++++ S + D + E+ GSL + S NY + E ++++ VG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 124
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD-DSLIQTKTMATI 340
L Y+H ++H D+KPSNI + + + + EGD D K M I
Sbjct: 125 GLRYIHS----MSLVHMDIKPSNIFISRTSIPNAAS-------EEGDEDDWASNKVMFKI 173
Query: 341 G 341
G
Sbjct: 174 G 174
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 181 LGIGSFGSVYKGTLSDGTNV--AIKIFNLQLERTFVSFNSECEVL-RNVRHRNLIKILSG 237
+G+GS+ S K + TN+ A+K+ ++++ + E E+L R +H N+I +
Sbjct: 35 IGVGSY-SECKRCVHKATNMEYAVKV----IDKSKRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
+ LV E M G L + +F + E ++ +G +EYLH ++H
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSE-REASFVLHTIGKTVEYLHS----QGVVH 144
Query: 298 CDLKPSNIL-LDEN---MVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----V 349
DLKPSNIL +DE+ + DFG +K L ++ L+ T T ++APE +
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCY-TANFVAPEVLKRQGY 202
Query: 350 STKCDVYSYGILLLETFSRKKP 371
CD++S GILL + P
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTP 224
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNLIKILSGC 238
+G G++G VYK + G A+K L+ E + + E +L+ ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
LV E + + L+K L L+ + + ++ + + Y H ++H
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR----VLHR 124
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV-----STKC 353
DLKP N+L++ ++DFG+++ G T + T+ Y AP+ ++ ST
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 354 DVYSYGILLLE 364
D++S G + E
Sbjct: 183 DIWSVGCIFAE 193
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNLIKILSGC 238
+G G++G VYK + G A+K L+ E + + E +L+ ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
LV E + + L+K L L+ + + ++ + + Y H ++H
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR----VLHR 124
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV-----STKC 353
DLKP N+L++ ++DFG+++ G T + T+ Y AP+ ++ ST
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 354 DVYSYGILLLE 364
D++S G + E
Sbjct: 183 DIWSVGCIFAE 193
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNLIKILSGC 238
+G G++G VYK + G A+K L+ E + + E +L+ ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298
LV E + + L+K L L+ + + ++ + + Y H ++H
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR----VLHR 124
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV-----STKC 353
DLKP N+L++ ++DFG+++ G T + T+ Y AP+ ++ ST
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 354 DVYSYGILLLE 364
D++S G + E
Sbjct: 183 DIWSVGCIFAE 193
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 24/243 (9%)
Query: 181 LGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
+G GS G V T+ S G VA+K +L+ ++ +E ++R+ +H N++++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--IMIDVGLA-LEYLHYGHALAPII 296
D +V+EF+ G+L + +H R+N + V LA L+ L HA +I
Sbjct: 92 VGDELWVVMEFLEGGALTD-IVTHT-------RMNEEQIAAVCLAVLQALSVLHAQG-VI 142
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTK 352
H D+K +ILL + +SDFG + + + + + T +MAPE I +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 353 CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMD 412
D++S GI+++E + P + + + +LP +L NL + S +D
Sbjct: 201 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-----KNLHKVSPSLKGFLD 255
Query: 413 CLL 415
LL
Sbjct: 256 RLL 258
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGT--LSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRN 225
RA +++ +G G++G V+K + G VA+K +Q E +S E VLR+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 226 VR---HRNLIKILSGC--SNLDFKA---LVLEFMPNGSLEKWLYSHNYFLDILERL-NIM 276
+ H N++++ C S D + LV E + + L +L E + ++M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
+ L++LH ++H DLKP NIL+ + ++DFG++++ + T
Sbjct: 127 FQLLRGLDFLHSHR----VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSV 179
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFSRK 369
+ T+ Y APE ++ +T D++S G + E F RK
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNV-- 226
R T EF E +G G FGSV+K DG AIK L + N+ EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 227 -RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNY----FLDILERLNIMIDVGL 281
+H ++++ S + D + E+ GSL + S NY + E ++++ VG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 124
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD-DSLIQTKTMATI 340
L Y+H ++H D+KPSNI + + + + EGD D K M I
Sbjct: 125 GLRYIHS----MSLVHMDIKPSNIFISRTSIPNAAS-------EEGDEDDWASNKVMFKI 173
Query: 341 G 341
G
Sbjct: 174 G 174
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 181 LGIGSFGSVYKGTLSDGTNV--AIKIFNLQLERTFVSFNSECEVL-RNVRHRNLIKILSG 237
+G+GS+ S K + TN+ A+K+ ++++ + E E+L R +H N+I +
Sbjct: 35 IGVGSY-SECKRCVHKATNMEYAVKV----IDKSKRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
+ LV E M G L + +F + E ++ +G +EYLH ++H
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSE-REASFVLHTIGKTVEYLHS----QGVVH 144
Query: 298 CDLKPSNIL-LDEN---MVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----V 349
DLKPSNIL +DE+ + DFG +K L ++ L+ T T ++APE +
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCY-TANFVAPEVLKRQGY 202
Query: 350 STKCDVYSYGILLLETFSRKKP 371
CD++S GILL + P
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTP 224
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNV-- 226
R T EF E +G G FGSV+K DG AIK L + N+ EV +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 227 -RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNY----FLDILERLNIMIDVGL 281
+H ++++ S + D + E+ GSL + S NY + E ++++ VG
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 126
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD-DSLIQTKTMATI 340
L Y+H ++H D+KPSNI + + + + EGD D K M I
Sbjct: 127 GLRYIHS----MSLVHMDIKPSNIFISRTSIPNAAS-------EEGDEDDWASNKVMFKI 175
Query: 341 G 341
G
Sbjct: 176 G 176
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNV-- 226
R T EF E +G G FGSV+K DG AIK L + N+ EV +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 227 -RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNY----FLDILERLNIMIDVGL 281
+H ++++ S + D + E+ GSL + S NY + E ++++ VG
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 122
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD-DSLIQTKTMATI 340
L Y+H ++H D+KPSNI + + + + EGD D K M I
Sbjct: 123 GLRYIHS----MSLVHMDIKPSNIFISRTSIPNAAS-------EEGDEDDWASNKVMFKI 171
Query: 341 G 341
G
Sbjct: 172 G 172
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 172 TNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRH 228
++ +D LG G+F V + + G A KI N + R F E + R ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILER-----LNIMIDVGLAL 283
N++++ F LV + + G L F DI+ R + + L
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL---------FEDIVAREFYSEADASHCIQQIL 114
Query: 284 EYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATI 340
E + Y H+ I+H +LKP N+LL + ++DFG++ E +DS T
Sbjct: 115 ESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTP 170
Query: 341 GYMAPEGI----VSTKCDVYSYGILL 362
GY++PE + S D+++ G++L
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 172 TNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRH 228
++ +D LG G+F V + + G A KI N + R F E + R ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILER-----LNIMIDVGLAL 283
N++++ F LV + + G L F DI+ R + + L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL---------FEDIVAREFYSEADASHCIQQIL 115
Query: 284 EYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATI 340
E + Y H+ I+H +LKP N+LL + ++DFG++ E +DS T
Sbjct: 116 ESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTP 171
Query: 341 GYMAPEGI----VSTKCDVYSYGILL 362
GY++PE + S D+++ G++L
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 172 TNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRH 228
++ +D LG G+F V + + G A KI N + R F E + R ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILER-----LNIMIDVGLAL 283
N++++ F LV + + G L F DI+ R + + L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL---------FEDIVAREFYSEADASHCIQQIL 115
Query: 284 EYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATI 340
E + Y H+ I+H +LKP N+LL + ++DFG++ E +DS T
Sbjct: 116 ESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTP 171
Query: 341 GYMAPEGI----VSTKCDVYSYGILL 362
GY++PE + S D+++ G++L
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 180 LLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLERT--FVSFNSECEVLRNVRHRNLIKILS 236
+LG GSFG V K A+K+ N + + E E+L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPII 296
+ +V E G L + F + + I+ V + Y+H + I+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMHKHN----IV 143
Query: 297 HCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG---YMAPE---G 347
H DLKP NILL +++ + DFG+S + TK IG Y+APE G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN------TKMKDRIGTAYYIAPEVLRG 197
Query: 348 IVSTKCDVYSYGILLLETFSRKKP 371
KCDV+S G++L S P
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 157 LVTWRRISYLDIQRAT-NEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFV 214
+ W+ +L+ Q T N F + +LG G FG V + + G A K + +
Sbjct: 170 FLQWK---WLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK 226
Query: 215 SFN---SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILE 271
+E ++L V R ++ + D LVL M G L+ +Y H E
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFPE 285
Query: 272 RLNIM--IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329
+ ++ LE LH I++ DLKP NILLD++ +SD G++ + EG
Sbjct: 286 ARAVFYAAEICCGLEDLHRER----IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-- 339
Query: 330 SLIQTKTMATIGYMAPEGIVSTK----CDVYSYGILLLETFSRKKP 371
I+ + + T+GYMAPE + + + D ++ G LL E + + P
Sbjct: 340 QTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 157 LVTWRRISYLDIQRAT-NEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFV 214
+ W+ +L+ Q T N F + +LG G FG V + + G A K + +
Sbjct: 170 FLQWK---WLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK 226
Query: 215 SFN---SECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILE 271
+E ++L V R ++ + D LVL M G L+ +Y H E
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFPE 285
Query: 272 RLNIM--IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329
+ ++ LE LH I++ DLKP NILLD++ +SD G++ + EG
Sbjct: 286 ARAVFYAAEICCGLEDLHRER----IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-- 339
Query: 330 SLIQTKTMATIGYMAPEGIVSTK----CDVYSYGILLLETFSRKKP 371
I+ + + T+GYMAPE + + + D ++ G LL E + + P
Sbjct: 340 QTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 172 TNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRH 228
++ +D LG G+F V + + G A KI N + R F E + R ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILER-----LNIMIDVGLAL 283
N++++ F LV + + G L F DI+ R + + L
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGEL---------FEDIVAREFYSEADASHCIQQIL 138
Query: 284 EYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATI 340
E + Y H+ I+H +LKP N+LL + ++DFG++ E +DS T
Sbjct: 139 ESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTP 194
Query: 341 GYMAPEGI----VSTKCDVYSYGILL 362
GY++PE + S D+++ G++L
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGT--LSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRN 225
RA +++ +G G++G V+K + G VA+K +Q E +S E VLR+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 226 VR---HRNLIKILSGC--SNLDFKA---LVLEFMPNGSLEKWLYSHNYFLDILERL-NIM 276
+ H N++++ C S D + LV E + + L +L E + ++M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
+ L++LH ++H DLKP NIL+ + ++DFG++++ + T
Sbjct: 127 FQLLRGLDFLHSHR----VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSV 179
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFSRK 369
+ T+ Y APE ++ +T D++S G + E F RK
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGT--LSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRN 225
RA +++ +G G++G V+K + G VA+K +Q E +S E VLR+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 226 VR---HRNLIKILSGC--SNLDFKA---LVLEFMPNGSLEKWLYSHNYFLDILERL-NIM 276
+ H N++++ C S D + LV E + + L +L E + ++M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
+ L++LH ++H DLKP NIL+ + ++DFG++++ + T
Sbjct: 127 FQLLRGLDFLHSHR----VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSV 179
Query: 337 MATIGYMAPEGIV----STKCDVYSYGILLLETFSRK 369
+ T+ Y APE ++ +T D++S G + E F RK
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 180 LLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLERT--FVSFNSECEVLRNVRHRNLIKILS 236
+LG GSFG V K A+K+ N + + E E+L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPII 296
+ +V E G L + F + + I+ V + Y+H + I+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMHKHN----IV 143
Query: 297 HCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG---YMAPE---G 347
H DLKP NILL +++ + DFG+S + TK IG Y+APE G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN------TKMKDRIGTAYYIAPEVLRG 197
Query: 348 IVSTKCDVYSYGILLLETFSRKKP 371
KCDV+S G++L S P
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 161 RRISYLDIQRATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNS- 218
+RI Y +++F +LLG G++G V T G VAIK ++ + +
Sbjct: 3 KRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTL 57
Query: 219 -ECEVLRNVRHRNLIKILS-----GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILER 272
E ++L++ +H N+I I + N + ++ E M L + + + D ++
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQY 116
Query: 273 LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE--GDDS 330
+ A++ LH + +IH DLKPSN+L++ N V DFG+++++ E D+S
Sbjct: 117 F--IYQTLRAVKVLHGSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 331 LIQTKT------MATIGYMAPEGIV-----STKCDVYSYGILLLETFSRK 369
+ +AT Y APE ++ S DV+S G +L E F R+
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 18/144 (12%)
Query: 268 DILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327
DIL + I + + ALE+LH + +IH D+KPSN+L++ + DFGIS L
Sbjct: 153 DILGK--IAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV-- 205
Query: 328 DDSLIQTKTMATIGYMAPEGI--------VSTKCDVYSYGILLLETFSRKKPTNDLGE-- 377
DS+ +T YMAPE I S K D++S GI ++E + P + G
Sbjct: 206 -DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF 264
Query: 378 MSLKHWVNQSLPHKLAEVVDSNLV 401
LK V + P A+ + V
Sbjct: 265 QQLKQVVEEPSPQLPADKFSAEFV 288
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 180 LLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLERT--FVSFNSECEVLRNVRHRNLIKILS 236
+LG GSFG V K A+K+ N + + E E+L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPII 296
+ +V E G L + F + + I+ V + Y+H + I+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMHKHN----IV 143
Query: 297 HCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG---YMAPE---G 347
H DLKP NILL +++ + DFG+S + TK IG Y+APE G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ------NTKMKDRIGTAYYIAPEVLRG 197
Query: 348 IVSTKCDVYSYGILLLETFSRKKP 371
KCDV+S G++L S P
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 167 DIQRATNEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQLERTFVSFNSECEV 222
D++ +++ ++G G+FG V +K T + F + F E ++
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--IMIDVG 280
+ ++++ + + +V+E+MP G L + NY D+ E+ +V
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY--DVPEKWARFYTAEVV 178
Query: 281 LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKT-MA 338
LAL+ +H IH D+KP N+LLD++ ++DFG K+ EG +++ T +
Sbjct: 179 LALDAIHS----MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG---MVRCDTAVG 231
Query: 339 TIGYMAPE--------GIVSTKCDVYSYGILLLETFSRKKP 371
T Y++PE G +CD +S G+ L E P
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR------HRNLIK 233
+G G+F V + G VA+KI +++T ++ +S ++ R VR H N++K
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKI----IDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 70
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ LV+E+ G + +L +H + + R V A++Y H
Sbjct: 71 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS-AVQYCHQKF--- 126
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD--DSLIQTKTMATIGYMAPEGIVST 351
I+H DLK N+LLD +M ++DFG S G+ D+ + Y APE
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP-----YAAPELFQGK 180
Query: 352 K-----CDVYSYGILLLETFSRKKP 371
K DV+S G++L S P
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 172 TNEFDECNLLGIGSFGSVY--KGTLSDGTNVAIKIFNLQLERTFVSFNS-------ECEV 222
++ + LG G++G V K L+ G AIKI ++++ V+ S E V
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKI----IKKSSVTTTSNSGALLDEVAV 57
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLA 282
L+ + H N++K+ + LV+E G L + F ++ + IM V
Sbjct: 58 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVLSG 116
Query: 283 LEYLHYGHALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
YLH + I+H DLKP N+LL+ + + + DFG+S G + + T
Sbjct: 117 TTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGT 169
Query: 340 IGYMAPEGI---VSTKCDVYSYGILL 362
Y+APE + KCDV+S G++L
Sbjct: 170 AYYIAPEVLRKKYDEKCDVWSCGVIL 195
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 175 FDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLI 232
+ + +G G++G V T VAIK + +T+ E ++L RH N+I
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 233 KILSGCSNLDFKAL----VLEFMPNGSLEKWLYSHN-------YFLDILERLNIMIDVGL 281
I +A+ +++ + L K L S YFL + R
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILR--------- 155
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATI 340
L+Y+H A ++H DLKPSN+L++ + DFG++++ E D + T+ +AT
Sbjct: 156 GLKYIHS----ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 341 GYMAPEGIVSTK-----CDVYSYGILLLETFSRK 369
Y APE ++++K D++S G +L E S +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 167 DIQRATNEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQLERTFVSFNSECEV 222
D++ +++ ++G G+FG V +K T + F + F E ++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--IMIDVG 280
+ ++++ + + +V+E+MP G L + NY D+ E+ +V
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY--DVPEKWARFYTAEVV 183
Query: 281 LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKT-MA 338
LAL+ +H IH D+KP N+LLD++ ++DFG K+ EG +++ T +
Sbjct: 184 LALDAIHS----MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG---MVRCDTAVG 236
Query: 339 TIGYMAPE--------GIVSTKCDVYSYGILLLETFSRKKP 371
T Y++PE G +CD +S G+ L E P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 27/243 (11%)
Query: 150 DEEDLLPLVTWRRISYLDIQ-RATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNL 207
D + L + W+ +L+ Q + F + +LG G FG V+ + + G A K N
Sbjct: 164 DSKYFLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNK 220
Query: 208 QLERTFVSFNS---ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYS-- 262
+ + + E ++L V R ++ + LV+ M G + +Y+
Sbjct: 221 KRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD 280
Query: 263 -HNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS 321
N + + LE+LH + II+ DLKP N+LLD++ +SD G++
Sbjct: 281 EDNPGFQEPRAIFYTAQIVSGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 322 KLLGEGDDSLIQTKT---MATIGYMAPEGIVSTK----CDVYSYGILLLETFSRKKPTND 374
L G QTKT T G+MAPE ++ + D ++ G+ L E + + P
Sbjct: 337 VELKAG-----QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
Query: 375 LGE 377
GE
Sbjct: 392 RGE 394
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 167 DIQRATNEFDECNLLGIGSFGSV----YKGTLSDGTNVAIKIFNLQLERTFVSFNSECEV 222
D++ +++ ++G G+FG V +K T + F + F E ++
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--IMIDVG 280
+ ++++ + + +V+E+MP G L + NY D+ E+ +V
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY--DVPEKWARFYTAEVV 183
Query: 281 LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSLIQTKT-MA 338
LAL+ +H IH D+KP N+LLD++ ++DFG K+ EG +++ T +
Sbjct: 184 LALDAIHS----MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG---MVRCDTAVG 236
Query: 339 TIGYMAPE--------GIVSTKCDVYSYGILLLETFSRKKP 371
T Y++PE G +CD +S G+ L E P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 109
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 110 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRH 228
NEF+ LLG G+FG V + G A+KI ++ + +E VL+N RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
L + D V+E+ G L L F + R ++ AL+YLH
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH- 265
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMAPEG 347
+ +++ DLK N++LD++ ++DFG+ K EG KT T Y+APE
Sbjct: 266 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAPEV 320
Query: 348 I----VSTKCDVYSYGILLLETFSRKKP 371
+ D + G+++ E + P
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 173 NEFDECNLLGIGSFGSVY-KGTLSDGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRH 228
NEF+ LLG G+FG V + G A+KI ++ + +E VL+N RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
L + D V+E+ G L L F + R ++ AL+YLH
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH- 268
Query: 289 GHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMAPEG 347
+ +++ DLK N++LD++ ++DFG+ K EG KT T Y+APE
Sbjct: 269 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAPEV 323
Query: 348 I----VSTKCDVYSYGILLLETFSRKKP 371
+ D + G+++ E + P
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFN-LQLERTFVS-FNSECEVLRNVRHRNLIKILSG 237
+G G+F V + G VA+KI + QL T + E +++ + H N++K+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
LV+E+ G + +L +H + R V A++Y H + I+H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKY----IVH 137
Query: 298 CDLKPSNILLDENMVAHVSDFGISKLLGEGD--DSLIQTKTMATIGYMAPEGIVSTK--- 352
DLK N+LLD +M ++DFG S G+ D+ + Y APE K
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPP-----YAAPELFQGKKYDG 192
Query: 353 --CDVYSYGILLLETFSRKKP 371
DV+S G++L S P
Sbjct: 193 PEVDVWSLGVILYTLVSGSLP 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 4 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 107
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 108 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 166
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 167 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 27/253 (10%)
Query: 137 VYVRCQNRSTKKSDEEDLLPLVTW-----RRISYLDIQRATNEFDECNLLGIGSFGSVYK 191
+Y C N ++ E+++L + W ++ + + R +F+ ++G G+FG V
Sbjct: 37 LYDECNNSPLRR--EKNILEYLEWAKPFTSKVKQMRLHR--EDFEILKVIGRGAFGEVAV 92
Query: 192 GTLSDGTNV-AIKIFNL--QLERTFVS-FNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247
L + V A+KI N L+R + F E +VL N + + + + + LV
Sbjct: 93 VKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152
Query: 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL 307
+++ G L L L + ++ +A++ +H H +H D+KP NIL+
Sbjct: 153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH----YVHRDIKPDNILM 208
Query: 308 DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE---------GIVSTKCDVYSY 358
D N ++DFG L E D ++ + + T Y++PE G +CD +S
Sbjct: 209 DMNGHIRLADFGSCLKLME-DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSL 267
Query: 359 GILLLETFSRKKP 371
G+ + E + P
Sbjct: 268 GVCMYEMLYGETP 280
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFN-LQLERTFVS-FNSECEVLRNVRHRNLIKILSG 237
+G G+F V + G VAIKI + QL T + E +++ + H N++K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
L++E+ G + +L +H + R V A++Y H I+H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-AVQYCHQKR----IVH 137
Query: 298 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG---YMAPEGIVSTK-- 352
DLK N+LLD +M ++DFG S ++ + K A G Y APE K
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 353 ---CDVYSYGILLLETFSRKKP 371
DV+S G++L S P
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLP 213
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVY----KGTLSDGTNVAIKIFNLQL---ERTFVSFNS 218
+D + NEF+ LLG G+FG V K T G A+KI ++ + +
Sbjct: 3 MDPRVTMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLT 59
Query: 219 ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
E VL+N RH L + D V+E+ G L L F + R +
Sbjct: 60 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAE 118
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSLIQTKTM 337
+ AL+YLH + +++ DLK N++LD++ ++DFG+ K EG D
Sbjct: 119 IVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFC 172
Query: 338 ATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKP 371
T Y+APE + D + G+++ E + P
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 109
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 110 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G++G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 30/206 (14%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR------HRNLIK 233
+G G+F V + G VA+KI +++T ++ +S ++ R VR H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKI----IDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ LV+E+ G + +L +H + R V A++Y H
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG---YMAPEGIVS 350
I+H DLK N+LLD +M ++DFG S G+ K A G Y APE
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN------KLDAFCGAPPYAAPELFQG 186
Query: 351 TK-----CDVYSYGILLLETFSRKKP 371
K DV+S G++L S P
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 174 EFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRN 230
++D LG G++G V + ++ T A+ + + ++R + E + + + H N
Sbjct: 8 DWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALEYL 286
++K + + L LE+ G L D +E D+G+ A +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQRFF 111
Query: 287 H-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
H Y H + I H D+KP N+LLDE +SDFG++ + + + K T
Sbjct: 112 HQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 340 IGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
+ Y+APE + + DV+S GI+L + + P +
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 174 EFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRN 230
++D LG G++G V + ++ T A+ + + ++R + E + + + H N
Sbjct: 8 DWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALEYL 286
++K + + L LE+ G L D +E D+G+ A +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQRFF 111
Query: 287 H-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
H Y H + I H D+KP N+LLDE +SDFG++ + + + K T
Sbjct: 112 HQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 340 IGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
+ Y+APE + + DV+S GI+L + + P +
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 174 EFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRN 230
++D LG G++G V + ++ T A+ + + ++R + E + + + H N
Sbjct: 7 DWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALEYL 286
++K + + L LE+ G L D +E D+G+ A +
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQRFF 110
Query: 287 H-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
H Y H + I H D+KP N+LLDE +SDFG++ + + + K T
Sbjct: 111 HQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 340 IGYMAPEGIV-----STKCDVYSYGILLLETFSRKKP 371
+ Y+APE + + DV+S GI+L + + P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 174 EFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRN 230
++D LG G++G V + ++ T A+ + + ++R + E + + + H N
Sbjct: 8 DWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALEYL 286
++K + + L LE+ G L D +E D+G+ A +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQRFF 111
Query: 287 H-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
H Y H + I H D+KP N+LLDE +SDFG++ + + + K T
Sbjct: 112 HQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 340 IGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
+ Y+APE + + DV+S GI+L + + P +
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 3 IGGLKDLATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIPKSLEALLYLKQLNV 62
IG + L L+L N G IP G G IP+++ AL L ++++
Sbjct: 649 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 708
Query: 63 SQNRLEGEIPVEGPFRNFSTESFSWNYALCGPSRFQVPPCKEEN 106
S N L G IP G F F F N LCG + +P C N
Sbjct: 709 SNNNLSGPIPEMGQFETFPPAKFLNNPGLCG---YPLPRCDPSN 749
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 29/71 (40%)
Query: 2 TIGGLKDLATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIPKSLEALLYLKQLN 61
++G L L L L N G IP+ GEIP L L ++
Sbjct: 434 SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS 493
Query: 62 VSQNRLEGEIP 72
+S NRL GEIP
Sbjct: 494 LSNNRLTGEIP 504
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 28/66 (42%)
Query: 9 LATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIPKSLEALLYLKQLNVSQNRLE 68
L L L N F G IP + G IP SL +L L+ L + N LE
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 69 GEIPVE 74
GEIP E
Sbjct: 453 GEIPQE 458
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 4 GGLKDLATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIP-KSLEALLYLKQLNV 62
G L L L+ N F+G +P FG GE+P +L + LK L++
Sbjct: 288 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 347
Query: 63 SQNRLEGEIP 72
S N GE+P
Sbjct: 348 SFNEFSGELP 357
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 26/69 (37%)
Query: 6 LKDLATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIPKSLEALLYLKQLNVSQN 65
+K L TL L N G IP GEIPK + L L L +S N
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 521
Query: 66 RLEGEIPVE 74
G IP E
Sbjct: 522 SFSGNIPAE 530
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 45 GEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFSTESFSWN 88
G IPK + ++ YL LN+ N + G IP E G R + S N
Sbjct: 643 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 687
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 3 IGGLKDLATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIPKSLEALLYLKQLNV 62
IG + L L+L N G IP G G IP+++ AL L ++++
Sbjct: 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711
Query: 63 SQNRLEGEIPVEGPFRNFSTESFSWNYALCGPSRFQVPPCKEEN 106
S N L G IP G F F F N LCG + +P C N
Sbjct: 712 SNNNLSGPIPEMGQFETFPPAKFLNNPGLCG---YPLPRCDPSN 752
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 29/71 (40%)
Query: 2 TIGGLKDLATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIPKSLEALLYLKQLN 61
++G L L L L N G IP+ GEIP L L ++
Sbjct: 437 SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS 496
Query: 62 VSQNRLEGEIP 72
+S NRL GEIP
Sbjct: 497 LSNNRLTGEIP 507
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 28/66 (42%)
Query: 9 LATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIPKSLEALLYLKQLNVSQNRLE 68
L L L N F G IP + G IP SL +L L+ L + N LE
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 69 GEIPVE 74
GEIP E
Sbjct: 456 GEIPQE 461
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 4 GGLKDLATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIP-KSLEALLYLKQLNV 62
G L L L+ N F+G +P FG GE+P +L + LK L++
Sbjct: 291 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 350
Query: 63 SQNRLEGEIP 72
S N GE+P
Sbjct: 351 SFNEFSGELP 360
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 26/69 (37%)
Query: 6 LKDLATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIPKSLEALLYLKQLNVSQN 65
+K L TL L N G IP GEIPK + L L L +S N
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524
Query: 66 RLEGEIPVE 74
G IP E
Sbjct: 525 SFSGNIPAE 533
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 45 GEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFSTESFSWN 88
G IPK + ++ YL LN+ N + G IP E G R + S N
Sbjct: 646 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 154 LLPLVTWRRISYLDIQ-RATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLER 211
L + W+ +L+ Q + F + +LG G FG V+ + + G A K N + +
Sbjct: 168 FLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 212 TFVSFNS---ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYS---HNY 265
+ E ++L V R ++ + LV+ M G + +Y+ N
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 266 FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325
+ + LE+LH + II+ DLKP N+LLD++ +SD G++ L
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 326 EGDDSLIQTKT---MATIGYMAPEGIVSTK----CDVYSYGILLLETFSRKKPTNDLGE 377
G QTKT T G+MAPE ++ + D ++ G+ L E + + P GE
Sbjct: 341 AG-----QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 174 EFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRHRN 230
++D LG G++G V + ++ T A+ + + ++R + E + + + H N
Sbjct: 8 DWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALEYL 286
++K + + L LE+ G L D +E D+G+ A +
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQRFF 111
Query: 287 H-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
H Y H + I H D+KP N+LLDE +SDFG++ + + + K T
Sbjct: 112 HQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 340 IGYMAPEGIV-----STKCDVYSYGILLLETFSRKKP 371
+ Y+APE + + DV+S GI+L + + P
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 154 LLPLVTWRRISYLDIQ-RATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLER 211
L + W+ +L+ Q + F + +LG G FG V+ + + G A K N + +
Sbjct: 168 FLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 212 TFVSFNS---ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYS---HNY 265
+ E ++L V R ++ + LV+ M G + +Y+ N
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 266 FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325
+ + LE+LH + II+ DLKP N+LLD++ +SD G++ L
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 326 EGDDSLIQTKT---MATIGYMAPEGIVSTK----CDVYSYGILLLETFSRKKPTNDLGE 377
G QTKT T G+MAPE ++ + D ++ G+ L E + + P GE
Sbjct: 341 AG-----QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 154 LLPLVTWRRISYLDIQ-RATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLER 211
L + W+ +L+ Q + F + +LG G FG V+ + + G A K N + +
Sbjct: 168 FLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 212 TFVSFNS---ECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYS---HNY 265
+ E ++L V R ++ + LV+ M G + +Y+ N
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 266 FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325
+ + LE+LH + II+ DLKP N+LLD++ +SD G++ L
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 326 EGDDSLIQTKT---MATIGYMAPEGIVSTK----CDVYSYGILLLETFSRKKPTNDLGE 377
G QTKT T G+MAPE ++ + D ++ G+ L E + + P GE
Sbjct: 341 AG-----QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI------ 348
IIH D+KPSNILLD + + DFGIS G+ DS+ +T+ YMAPE I
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGIS---GQLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 349 --VSTKCDVYSYGILLLETFSRKKP 371
+ DV+S GI L E + + P
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 28/205 (13%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR------HRNLIK 233
+G G+F V + G VA+KI +++T ++ +S ++ R VR H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKI----IDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ LV+E+ G + +L +H + R V A++Y H
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD--DSLIQTKTMATIGYMAPEGIVST 351
I+H DLK N+LLD +M ++DFG S G+ D+ + Y APE
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQGK 187
Query: 352 K-----CDVYSYGILLLETFSRKKP 371
K DV+S G++L S P
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 269 ILERL--NIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326
I ER+ + + + AL YL H +IH D+KPSNILLDE + DFGIS G
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGIS---GR 174
Query: 327 GDDSLIQTKTMATIGYMAPEGI---------VSTKCDVYSYGILLLETFSRKKP 371
D + ++ YMAPE I + DV+S GI L+E + + P
Sbjct: 175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 23/201 (11%)
Query: 181 LGIGSFGSV-YKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS 239
+G GS G V G VA+K+ +L+ ++ +E ++R+ +H N++++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILE--RLN---IMIDVGLALEYLHYGHALAP 294
+ +++EF+ G+L DI+ RLN I L+ L Y HA
Sbjct: 113 VGEELWVLMEFLQGGALT----------DIVSQVRLNEEQIATVCEAVLQALAYLHAQG- 161
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VS 350
+IH D+K +ILL + +SDFG + + D + + T +MAPE I +
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISK--DVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 351 TKCDVYSYGILLLETFSRKKP 371
T+ D++S GI+++E + P
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPP 240
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 78 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTD 181
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 182 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 28/205 (13%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR------HRNLIK 233
+G G+F V + G VA+KI +++T ++ +S ++ R VR H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKI----IDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ LV+E+ G + +L +H + R V A++Y H
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD--DSLIQTKTMATIGYMAPEGIVST 351
I+H DLK N+LLD +M ++DFG S G+ D+ + Y APE
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQGK 187
Query: 352 K-----CDVYSYGILLLETFSRKKP 371
K DV+S G++L S P
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 16/197 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNL 231
+ +D LG G+FG V++ T + G N A K E + E + + +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 232 IKILSGCSNLDFKALVLEFMPNGSL-EKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH 290
+ + + + ++ EFM G L EK HN + E + M V L ++H +
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED-EAVEYMRQVCKGLCHMHENN 169
Query: 291 ALAPIIHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSLIQTKTMATIGYMAPE-- 346
+H DLKP NI+ + DFG++ L D T T + APE
Sbjct: 170 ----YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVA 222
Query: 347 --GIVSTKCDVYSYGIL 361
V D++S G+L
Sbjct: 223 EGKPVGYYTDMWSVGVL 239
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF-VSFNSECEVLRN--VRH 228
++D LG G++G V + ++ T A+ + + ++R N + E+ N + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 109
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 110 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 175 FDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK 233
F+ L+G G++G VYKG + G AIK+ ++ + E +L+ H I
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 84
Query: 234 ILSGC------SNLDFKA-LVLEFMPNGSLEKWLYSHNYFLDILERLNIMI---DVGLAL 283
G +D + LV+EF GS+ + N + L+ I ++ L
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGL 142
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT-MATIGY 342
+LH +IH D+K N+LL EN + DFG+S L D ++ + T + T +
Sbjct: 143 SHLHQ----HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYW 195
Query: 343 MAPEGIVST---------KCDVYSYGILLLETFSRKKPTNDLGEM 378
MAPE I K D++S GI +E P D+ M
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM 240
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 78 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTD 181
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 182 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 16/197 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNL 231
+ +D LG G+FG V++ T + G N A K E + E + + +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 232 IKILSGCSNLDFKALVLEFMPNGSL-EKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH 290
+ + + + ++ EFM G L EK HN + E + M V L ++H +
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED-EAVEYMRQVCKGLCHMHENN 275
Query: 291 ALAPIIHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSLIQTKTMATIGYMAPE-- 346
+H DLKP NI+ + DFG++ L D T T + APE
Sbjct: 276 ----YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVA 328
Query: 347 --GIVSTKCDVYSYGIL 361
V D++S G+L
Sbjct: 329 EGKPVGYYTDMWSVGVL 345
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 173 NEFDECNLLGIGSFGSVY----KGTLSDGTNVAIKIFNLQL---ERTFVSFNSECEVLRN 225
NEF+ LLG G+FG V K T G A+KI ++ + +E VL+N
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
RH L + D V+E+ G L L F + R ++ AL+Y
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDY 124
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSLIQTKTMATIGYMA 344
LH + +++ DLK N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 125 LH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLA 178
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + D + G+++ E + P
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 172 TNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRH 228
T+E+ LG G+F V + + G A KI N + R E + R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
N++++ S F LV + + G L + + + Y+ + + + LE +++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILESVNH 118
Query: 289 GHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAP 345
H L I+H DLKP N+LL + ++DFG++ + +GD T GY++P
Sbjct: 119 CH-LNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQ-AWFGFAGTPGYLSP 175
Query: 346 EGI----VSTKCDVYSYGILL 362
E + D+++ G++L
Sbjct: 176 EVLRKDPYGKPVDMWACGVIL 196
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNL--QLERTFVS-FNSECEV 222
++Q +F+ ++G G+FG V + + + A+KI N L+R + F E +V
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 127
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG-- 280
L N + + + + + LV+++ G L L + F D L +G
Sbjct: 128 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLPEDMARFYIGEM 184
Query: 281 -LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-TMA 338
LA++ +H H +H D+KP N+LLD N ++DFG L DD +Q+ +
Sbjct: 185 VLAIDSIHQLH----YVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVG 238
Query: 339 TIGYMAPE---------GIVSTKCDVYSYGILLLETFSRKKP 371
T Y++PE G +CD +S G+ + E + P
Sbjct: 239 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 83
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 84 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTD 187
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 188 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 167 DIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNL--QLERTFVS-FNSECEV 222
++Q +F+ ++G G+FG V + + + A+KI N L+R + F E +V
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 143
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG-- 280
L N + + + + + LV+++ G L L + F D L +G
Sbjct: 144 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLPEDMARFYIGEM 200
Query: 281 -LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK-TMA 338
LA++ +H H +H D+KP N+LLD N ++DFG L DD +Q+ +
Sbjct: 201 VLAIDSIHQLH----YVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVG 254
Query: 339 TIGYMAPE---------GIVSTKCDVYSYGILLLETFSRKKP 371
T Y++PE G +CD +S G+ + E + P
Sbjct: 255 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 173 NEFDECNLLGIGSFGSVY----KGTLSDGTNVAIKIFNLQL---ERTFVSFNSECEVLRN 225
NEF+ LLG G+FG V K T G A+KI ++ + +E VL+N
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
RH L + D V+E+ G L L F + R ++ AL+Y
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDY 123
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSLIQTKTMATIGYMA 344
LH + +++ DLK N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 124 LH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLA 177
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKP 371
PE + D + G+++ E + P
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIVST-----KCDVYSYGILLLETFS 367
D + T +AT Y APE +++ D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 20/201 (9%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFN-LQLERTFVS-FNSECEVLRNVRHRNLIKILSG 237
+G G+F V + G VAIKI + QL T + E +++ + H N++K+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
L++E+ G + +L +H + R V A++Y H I+H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-AVQYCHQKR----IVH 134
Query: 298 CDLKPSNILLDENMVAHVSDFGISKLLGEGD--DSLIQTKTMATIGYMAPEGIVSTK--- 352
DLK N+LLD +M ++DFG S G D+ + Y APE K
Sbjct: 135 RDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPP-----YAAPELFQGKKYDG 189
Query: 353 --CDVYSYGILLLETFSRKKP 371
DV+S G++L S P
Sbjct: 190 PEVDVWSLGVILYTLVSGSLP 210
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 46/221 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV + G +A+K +L R F S E
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK----KLSRPFQSIIHAKRTYREL 101
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 102 RLLKHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQ 149
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 150 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 205
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLE 364
D + T +AT Y APE ++ + D++S G ++ E
Sbjct: 206 DEM--TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAE 244
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVYKGTL-----SDGT-NVAIKIFNLQLERT-FVSFNSECEVLRNV-RHRNLI 232
LG G+FG V + T SD VA+K+ T + SE +VL + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLY-SHNYFLDILERLNIM--------------- 276
+L C+ ++ E+ G L +L + F+ IM
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 277 -IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V + +L A IH DL NILL + + DFG+++ + + +++
Sbjct: 174 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+SYGI L E FS
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 80 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 183
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 184 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 219 ECEVLRNVR-HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM- 276
E ++LR V H N+I++ F LV + M G L +L + L E IM
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMR 131
Query: 277 --IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQT 334
++V AL L+ I+H DLKP NILLD++M ++DFG S L G+
Sbjct: 132 ALLEVICALHKLN-------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LR 181
Query: 335 KTMATIGYMAPEGI----------VSTKCDVYSYGILLLETFSRKKP 371
+ T Y+APE I + D++S G+++ + P
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 20/178 (11%)
Query: 207 LQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYF 266
+ ++ + F +E +++ ++++ + +N D ++ E+M N S+ K+ YF
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF---DEYF 137
Query: 267 LDILERLNIMIDVGL-------ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFG 319
+ + I + + L Y H I H D+KPSNIL+D+N +SDFG
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG 197
Query: 320 ISKLLGEGDDSLIQTKTMATIGYMAPEGIVS------TKCDVYSYGILLLETFSRKKP 371
S+ + D I+ + T +M PE + K D++S GI L F P
Sbjct: 198 ESEYMV---DKKIKG-SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 78 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 181
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 182 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 71
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 72 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 119
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 120 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 175
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 176 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR------HRNLIK 233
+G G+F V + G VA++I +++T ++ +S ++ R VR H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRI----IDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ LV+E+ G + +L +H + R V A++Y H
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTK- 352
I+H DLK N+LLD +M ++DFG S G+ + + Y APE K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKKY 189
Query: 353 ----CDVYSYGILLLETFSRKKP 371
DV+S G++L S P
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 219 ECEVLRNVR-HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM- 276
E ++LR V H N+I++ F LV + M G L +L + L E IM
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMR 118
Query: 277 --IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQT 334
++V AL L+ I+H DLKP NILLD++M ++DFG S L G+
Sbjct: 119 ALLEVICALHKLN-------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LR 168
Query: 335 KTMATIGYMAPEGI----------VSTKCDVYSYGILLLETFSRKKP 371
+ T Y+APE I + D++S G+++ + P
Sbjct: 169 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 75 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 178
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 179 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 69
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 70 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 117
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 173
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 174 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 28/205 (13%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR------HRNLIK 233
+G G+F V + G VA++I +++T ++ +S ++ R VR H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRI----IDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ LV+E+ G + +L +H + R V A++Y H
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD--DSLIQTKTMATIGYMAPEGIVST 351
I+H DLK N+LLD +M ++DFG S G+ D+ + Y APE
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQGK 187
Query: 352 K-----CDVYSYGILLLETFSRKKP 371
K DV+S G++L S P
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVYKGTL-----SDGT-NVAIKIFNLQLERT-FVSFNSECEVLRNV-RHRNLI 232
LG G+FG V + T SD VA+K+ T + SE +VL + H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLY-SHNYFLDILERLNIMI-------------- 277
+L C+ ++ E+ G L +L + F+ IM
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 278 --DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V + +L A IH DL NILL + + DFG+++ + + +++
Sbjct: 167 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+SYGI L E FS
Sbjct: 223 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 75 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTD 178
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 179 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 172 TNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRH 228
T+E+ LG G+F V + + G A KI N + R E + R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
N++++ S F LV + + G L + + + Y+ + + + LE +++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILESVNH 118
Query: 289 GHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAP 345
H L I+H DLKP N+LL + ++DFG++ + +GD T GY++P
Sbjct: 119 CH-LNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQ-AWFGFAGTPGYLSP 175
Query: 346 EGI----VSTKCDVYSYGILL 362
E + D+++ G++L
Sbjct: 176 EVLRKDPYGKPVDMWACGVIL 196
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 78 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 181
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 182 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 75 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 178
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 179 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 69 RLLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 172
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 173 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 79 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTD 182
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 183 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 83
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 84 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 187
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 188 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 69
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 70 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 117
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 173
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 174 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 91
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 92 RLLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 195
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 196 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 69 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 172
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 173 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 75 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 178
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 179 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 79 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 182
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 183 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 46/211 (21%)
Query: 181 LGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSECEVLRNVRHRNLIK 233
+G G++GSV G VA+K +L R F S E +L++++H N+I
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 95
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI--------LERLNIMIDVGL 281
+L F P SLE+ +L +H D+ L ++ +
Sbjct: 96 LLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 143
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ DD + T +AT
Sbjct: 144 ILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRW 197
Query: 342 YMAPEGIV-----STKCDVYSYGILLLETFS 367
Y APE ++ + D++S G ++ E +
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 95
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 96 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 199
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 200 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 84
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 85 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 189 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 84
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 85 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 189 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 79 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 182
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 183 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 15 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 70
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 71 RLLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 118
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 174
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 175 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 181 LGIGSFG-SVYKGTLSDGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNLIKILSG 237
+G GSFG ++ + DG IK N+ + S E VL N++H N+++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILER-LNIMIDVGLALEYLHYGHALAPII 296
+V+++ G L K + + L ++ L+ + + LAL+++H I+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD----RKIL 147
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTK 352
H D+K NI L ++ + DFGI+++L + + + T Y++PE + K
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPYNNK 205
Query: 353 CDVYSYGILLLE 364
D+++ G +L E
Sbjct: 206 SDIWALGCVLYE 217
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVYKGTL-----SDGT-NVAIKIFNLQLERT-FVSFNSECEVLRNV-RHRNLI 232
LG G+FG V + T SD VA+K+ T + SE +VL + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLY-SHNYFLDILERLNIM--------------- 276
+L C+ ++ E+ G L +L + F+ IM
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 277 -IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V + +L A IH DL NILL + + DFG+++ + + +++
Sbjct: 174 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+SYGI L E FS
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 69 RLLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCA 116
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 172
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 173 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 91
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 92 RLLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 195
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 196 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 219 ECEVLRNVR-HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIM- 276
E ++LR V H N+I++ F LV + M G L +L + L E IM
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMR 131
Query: 277 --IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQT 334
++V AL L+ I+H DLKP NILLD++M ++DFG S L G+
Sbjct: 132 ALLEVICALHKLN-------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LR 181
Query: 335 KTMATIGYMAPEGI----------VSTKCDVYSYGILLLETFSRKKP 371
T Y+APE I + D++S G+++ + P
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 92
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 93 RLLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 196
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 197 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVYKGTL-----SDGT-NVAIKIFNLQLERT-FVSFNSECEVLRNV-RHRNLI 232
LG G+FG V + T SD VA+K+ T + SE +VL + H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLY-SHNYFLDILERLNIM--------------- 276
+L C+ ++ E+ G L +L + F+ IM
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 277 -IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V + +L A IH DL NILL + + DFG+++ + + +++
Sbjct: 169 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+SYGI L E FS
Sbjct: 225 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 92
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 93 RLLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 196
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 197 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 181 LGIGSFGSVYKGTL-----SDGT-NVAIKIFNLQLERT-FVSFNSECEVLRNV-RHRNLI 232
LG G+FG V + T SD VA+K+ T + SE +VL + H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLY-SHNYFLDILERLNIM--------------- 276
+L C+ ++ E+ G L +L + F+ IM
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 277 -IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
V + +L A IH DL NILL + + DFG+++ + + +++
Sbjct: 151 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 336 TMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ +MAPE I + + DV+SYGI L E FS
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 79 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 182
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 183 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 48/218 (22%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVS--------FNSECEVLRN 225
++ C ++G G+F V + + G A+KI ++ F S E +
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVA---KFTSSPGLSTEDLKREASICHM 82
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSL---------EKWLYSH----NYFLDILER 272
++H +++++L S+ +V EFM L ++YS +Y ILE
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE- 141
Query: 273 LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDD 329
AL Y H + IIH D+KP N+LL + + + DFG++ LGE
Sbjct: 142 ---------ALRYCHDNN----IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES-- 186
Query: 330 SLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLL 363
L+ + T +MAPE + DV+ G++L
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTN-VAIKIFNLQLERTFVSFNSECEV--LRNVRHR 229
++++ +G G++G+V+K + VA+K L + V ++ E+ L+ ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 230 NLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYG 289
N++++ + LV EF + L+K+ S N LD + + + L + H
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE--- 346
+ ++H DLKP N+L++ N ++DFG+++ G + + T+ Y P+
Sbjct: 121 N----VLHRDLKPQNLLINRNGELKLADFGLARAFGIP--VRCYSAEVVTLWYRPPDVLF 174
Query: 347 --GIVSTKCDVYSYGILLLETFSRKKP 371
+ ST D++S G + E + +P
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 36/221 (16%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTF---VSFNSECEVLRNVRH 228
++D LG G+ G V + ++ T A+ + + ++R + E + + + H
Sbjct: 5 VEDWDLVQTLGEGAAGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL----ALE 284
N++K + + L LE+ G L D +E D+G+ A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL----------FDRIEP-----DIGMPEPDAQR 108
Query: 285 YLH-------YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
+ H Y H + I H D+KP N+LLDE +SDFG++ + + + K
Sbjct: 109 FFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRKKPTN 373
T+ Y+APE + + DV+S GI+L + + P +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 26/232 (11%)
Query: 156 PLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNL--QLERT 212
P+V R+ + +QR ++F+ ++G G+F V + G A+KI N L+R
Sbjct: 48 PIVV--RLKEVRLQR--DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRG 103
Query: 213 FVS-FNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILE 271
VS F E +VL N R + ++ + ++ LV+E+ G L L +
Sbjct: 104 EVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEM 163
Query: 272 RLNIMIDVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330
+ ++ +A++ +H G+ +H D+KP NILLD ++DFG S L D +
Sbjct: 164 ARFYLAEIVMAIDSVHRLGY-----VHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGT 217
Query: 331 LIQTKTMATIGYMAPEGIVST-----------KCDVYSYGILLLETFSRKKP 371
+ + T Y++PE + + +CD ++ G+ E F + P
Sbjct: 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 266 FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325
FL + + V +E+L A IH DL NILL E V + DFG+++ +
Sbjct: 189 FLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244
Query: 326 EGDDSLIQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ D + + + +MAPE I + + DV+S+G+LL E FS
Sbjct: 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 54/217 (24%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSF------NSECEVLRNVRHRNL 231
+G G++GSV Y L VA+K +L R F S E +L++++H N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDIL---ERLNIMIDVGLALEY--- 285
I +L F P S+E +S Y + L + NI+ L+ E+
Sbjct: 90 IGLLDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKSQALSDEHVQF 135
Query: 286 --------LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ + D+ + T +
Sbjct: 136 LVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYV 189
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRK 369
AT Y APE ++ + D++S G ++ E K
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 266 FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325
FL + + V +E+L A IH DL NILL E V + DFG+++ +
Sbjct: 187 FLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 242
Query: 326 EGDDSLIQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ D + + + +MAPE I + + DV+S+G+LL E FS
Sbjct: 243 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+ + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 266 FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325
FL + + V +E+L A IH DL NILL E V + DFG+++ +
Sbjct: 194 FLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 249
Query: 326 EGDDSLIQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ D + + + +MAPE I + + DV+S+G+LL E FS
Sbjct: 250 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 266 FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325
FL + + V +E+L A IH DL NILL E V + DFG+++ +
Sbjct: 196 FLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 251
Query: 326 EGDDSLIQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETFS 367
+ D + + + +MAPE I + + DV+S+G+LL E FS
Sbjct: 252 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 172 TNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRH 228
T+E+ +G G+F V + L G A KI N + R E + R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
N++++ S F LV + + G L + + + Y+ + + + LE + +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILEAVLH 118
Query: 289 GHALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAP 345
H + ++H DLKP N+LL + ++DFG++ + +GD T GY++P
Sbjct: 119 CHQMG-VVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQ-AWFGFAGTPGYLSP 175
Query: 346 EGI----VSTKCDVYSYGILL 362
E + D+++ G++L
Sbjct: 176 EVLRKEAYGKPVDIWACGVIL 196
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 36/216 (16%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRN 230
+ + +G G++G V + D N VAIK + +T+ E ++L RH N
Sbjct: 45 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN-----------IMIDV 279
+I I N +A +E M + +L +H D+ + L + +
Sbjct: 103 IIGI-----NDIIRAPTIEQMK----DVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQI 153
Query: 280 GLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMA 338
L+Y+H A ++H DLKPSN+LL+ + DFG++++ + D + T+ +A
Sbjct: 154 LRGLKYIHS----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 339 TIGYMAPEGIVSTK-----CDVYSYGILLLETFSRK 369
T Y APE ++++K D++S G +L E S +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 29/207 (14%)
Query: 184 GSFGSVYKGTLSDGTNVAIK-IFNLQLERTFVSFNSEC----EVLRNVR------HRNLI 232
GS+G+V G S+G VAIK +FN + V+ S+ VLR +R H N++
Sbjct: 33 GSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92
Query: 233 KILSGCSNLDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ + + A LV E M L + ++ + M + L L LH
Sbjct: 93 GLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH 151
Query: 288 YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG 347
A ++H DL P NILL +N + DF +++ E +T + Y APE
Sbjct: 152 E----AGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPEL 204
Query: 348 IVSTK-----CDVYSYGILLLETFSRK 369
++ K D++S G ++ E F+RK
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 171 ATNEFDECNLLGIGSFGSVYKG--TLSDGTNVAIKIFNLQLERTFVSFNS--ECEVLRNV 226
+ + + LG G++G VYK T+++ T VAIK L+ E V + E +L+ +
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNET-VAIKRIRLEHEEEGVPGTAIREVSLLKEL 90
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERL--NIMIDVGLALE 284
+HRN+I++ S + L+ E+ N L+K++ + D+ R+ + + + +
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVN 146
Query: 285 YLHYGHALAPIIHCDLKPSNILL-----DENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
+ H L H DLKP N+LL E V + DFG+++ G T + T
Sbjct: 147 FCHSRRCL----HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--THEIIT 200
Query: 340 IGYMAPEGIV-----STKCDVYSYGILLLE 364
+ Y PE ++ ST D++S + E
Sbjct: 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAE 230
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 29/207 (14%)
Query: 184 GSFGSVYKGTLSDGTNVAIK-IFNLQLERTFVSFNSEC----EVLRNVR------HRNLI 232
GS+G+V G S+G VAIK +FN + V+ S+ VLR +R H N++
Sbjct: 33 GSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92
Query: 233 KILSGCSNLDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ + + A LV E M L + ++ + M + L L LH
Sbjct: 93 GLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH 151
Query: 288 YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG 347
A ++H DL P NILL +N + DF +++ E +T + Y APE
Sbjct: 152 E----AGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPEL 204
Query: 348 IVSTK-----CDVYSYGILLLETFSRK 369
++ K D++S G ++ E F+RK
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + D+G+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVS----FNSECEVLRNVRHRNLIKIL- 235
+G GSF +VYKG L T V + LQ + S F E E L+ ++H N+++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 236 SGCSNLDFK---ALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGLALEYLHYGHA 291
S S + K LV E +G+L+ +L + +L I GL ++LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGL--QFLH--TR 148
Query: 292 LAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-- 348
PIIH DLK NI + + D G++ L + + T + APE
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXYEE 204
Query: 349 -VSTKCDVYSYGILLLETFSRKKPTND 374
DVY++G LE + + P ++
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYPYSE 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFN------LQLERTFVSFNSEC 220
I + + +G G++GSV G VA+K + + +RT+ E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY----REL 84
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 85 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 189 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 36/214 (16%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVS------FNSECEVLRNVR 227
+ + +G G++G+V G VAIK +L R F S E +L+++R
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIK----KLYRPFQSELFAKRAYRELRLLKHMR 82
Query: 228 HRNLIKILSGCSN-------LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 280
H N+I +L + DF LV+ FM G+ L H + +R+ + V
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDF-YLVMPFM--GTDLGKLMKHEKLGE--DRIQFL--VY 135
Query: 281 LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATI 340
L+ L Y HA A IIH DLKP N+ ++E+ + DFG+++ + D + + T
Sbjct: 136 QMLKGLRYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEM--XGXVVTR 189
Query: 341 GYMAPEGIV-----STKCDVYSYGILLLETFSRK 369
Y APE I+ + D++S G ++ E + K
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFN---SECEVLRNVRH 228
++++ +G GS+G V+K D G VAIK F L+ E V E +L+ ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKH 61
Query: 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERL--NIMIDVGLALEYL 286
NL+ +L LV E+ + L + Y + E L +I A+ +
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE 346
H + IH D+KP NIL+ ++ V + DFG ++LL D +AT Y +PE
Sbjct: 119 HKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY--DDEVATRWYRSPE 172
Query: 347 GIV-----STKCDVYSYGILLLETFS 367
+V DV++ G + E S
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 92
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 93 RLLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 196
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + +AT Y APE ++ + D++S G ++ E +
Sbjct: 197 DEM--XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 80 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE- 185
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
T +AT Y APE ++ + D++S G ++ E +
Sbjct: 186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 80 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE- 185
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
T +AT Y APE ++ + D++S G ++ E +
Sbjct: 186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 273 LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLI 332
L+I I + A+E+LH ++H DLKPSNI + V V DFG+ + + ++
Sbjct: 167 LHIFIQIAEAVEFLHSKG----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 333 QTKTMATIG----------YMAPEGI----VSTKCDVYSYGILLLE 364
M YM+PE I S K D++S G++L E
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 30/201 (14%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVLRNVRHRNLI 232
F+ + LG G+ VY+ GT A+K+ +++ V +E VL + H N+I
Sbjct: 55 FEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKIV--RTEIGVLLRLSHPNII 111
Query: 233 KILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
K+ +LVLE + G L EK YS D ++++ LE +
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI---------LEAVA 162
Query: 288 YGHALAPIIHCDLKPSNILLDE---NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
Y H I+H DLKP N+L + ++DFG+SK++ + ++ T GY A
Sbjct: 163 YLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCA 218
Query: 345 PEGI----VSTKCDVYSYGIL 361
PE + + D++S GI+
Sbjct: 219 PEILRGCAYGPEVDMWSVGII 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 80 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE- 185
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
T +AT Y APE ++ + D++S G ++ E +
Sbjct: 186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 54/217 (24%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSF------NSECEVLRNVRHRNL 231
+G G++GSV Y L VA+K +L R F S E +L++++H N+
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDIL---ERLNIMIDVGLALEY--- 285
I +L F P S+E +S Y + L + NI+ L+ E+
Sbjct: 82 IGLLDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQF 127
Query: 286 --------LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ + D+ + T +
Sbjct: 128 LVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEM--TGYV 181
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRK 369
AT Y APE ++ + D++S G ++ E K
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 69 RLLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 172
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + +AT Y APE ++ + D++S G ++ E +
Sbjct: 173 DEM--AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 268 DILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327
DIL + I + + ALE+LH + +IH D+KPSN+L++ + DFGIS L
Sbjct: 109 DILGK--IAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV-- 161
Query: 328 DDSLIQTKTMATIGYMAPEGI--------VSTKCDVYSYGILLLETFSRKKPTNDLGE-- 377
D + + YMAPE I S K D++S GI ++E + P + G
Sbjct: 162 -DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF 220
Query: 378 MSLKHWVNQSLPHKLAEVVDSNLV 401
LK V + P A+ + V
Sbjct: 221 QQLKQVVEEPSPQLPADKFSAEFV 244
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 181 LGIGSFGSV----YKGTLSDGTNVAIKIFNLQLERTFVS---FNSECEVLRNVRHRNLIK 233
LG G F V KGT + IK L R VS E +LR +RH N+I
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 234 ILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+ N L+LE + G L EK + + L+++ L+ +HY
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI---------LDGVHY 123
Query: 289 GHALAPIIHCDLKPSNI-LLDENM---VAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
H+ I H DLKP NI LLD+N+ + DFGI+ + G++ T ++A
Sbjct: 124 LHS-KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVA 179
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS 387
PE + + + D++S G++ S P LGE + N S
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGETKQETLTNIS 224
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 95/222 (42%), Gaps = 25/222 (11%)
Query: 181 LGIGSFGSV----YKGTLSDGTNVAIKIFNLQLERTFVS---FNSECEVLRNVRHRNLIK 233
LG G F V KGT + IK L R VS E +LR +RH N+I
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ N L+LE + G L +L + E + + L+ +HY H+
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQI---LDGVHYLHS-K 134
Query: 294 PIIHCDLKPSNI-LLDENM---VAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI- 348
I H DLKP NI LLD+N+ + DFGI+ + G++ T ++APE +
Sbjct: 135 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVN 191
Query: 349 ---VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS 387
+ + D++S G++ S P LGE + N S
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF--LGETKQETLTNIS 231
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 54/217 (24%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSF------NSECEVLRNVRHRNL 231
+G G++GSV Y L VA+K +L R F S E +L++++H N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDIL---ERLNIMIDVGLALEY--- 285
I +L F P S+E +S Y + L + NI+ L+ E+
Sbjct: 90 IGLLDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQF 135
Query: 286 --------LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM 337
L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ + D+ + T +
Sbjct: 136 LVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYV 189
Query: 338 ATIGYMAPEGIV-----STKCDVYSYGILLLETFSRK 369
AT Y APE ++ + D++S G ++ E K
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 43/205 (20%)
Query: 181 LGIGSFGSVY--KGTLSDGTNVAIKIFNLQLERTFVSFNS------ECEVLRNVRHRNLI 232
LG G++G V + ++ AIKI + +T VS +S E VL+ + H N++
Sbjct: 45 LGSGAYGEVLLCRDKVTH-VERAIKI----IRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN--------IMIDVGLALE 284
K+ + LV+E G L F +I+ R+ I+ V +
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGEL---------FDEIIHRMKFNEVDAAVIIKQVLSGVT 150
Query: 285 YLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
YLH + I+H DLKP N+LL +++ + + DFG+S + ++ + + T
Sbjct: 151 YLHKHN----IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAY 203
Query: 342 YMAPEGI---VSTKCDVYSYGILLL 363
Y+APE + KCDV+S G++L
Sbjct: 204 YIAPEVLRKKYDEKCDVWSIGVILF 228
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 124/298 (41%), Gaps = 54/298 (18%)
Query: 167 DIQRATNEFDECN---------LLGIGSFGS--VYKGTLSDGTNVAIKIFNLQL--ERTF 213
D +A++ +EC L IGS GS V++ AIK NL+ +T
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 214 VSFNSECEVLRNVRHRN--LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILE 271
S+ +E L ++ + +I++ + +V+E N L WL +D E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWE 156
Query: 272 RLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331
R + ++ LE +H H I+H DLKP+N L+ + M+ + DFGI+ + S+
Sbjct: 157 RKSYWKNM---LEAVHTIHQHG-IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSV 211
Query: 332 IQTKTMATIGYMAPEGIVSTKC---------------DVYSYGILLLETFSRKKPTNDLG 376
++ + T+ YM PE I DV+S G +L K P
Sbjct: 212 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----- 266
Query: 377 EMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCME-SPDERI 433
+ +NQ KL ++D N E F D + + L CC++ P +RI
Sbjct: 267 ---FQQIINQI--SKLHAIIDPN---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 313
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 95
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 96 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DFG+++ D
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 199
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + +AT Y APE ++ + D++S G ++ E +
Sbjct: 200 DEM--XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 169 QRATNEFDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLER------TFVSFNSECE 221
Q+ + +D LG G F V K S G A K + R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+LR V H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 282 ALEYLHYGHALAPIIHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSLIQTKTM 337
+ YLH I H DLKP NI LLD+N+ + H+ DFG++ E +D +
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 338 ATIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 28/212 (13%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRN 230
+ + +G G++G V + D N VAIK + +T+ E ++L RH N
Sbjct: 25 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN------IMIDVGLAL 283
+I I N +A +E M + + + L + Y L + L+ + + L
Sbjct: 83 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGY 342
+Y+H A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y
Sbjct: 138 KYIHS----ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 343 MAPEGIVSTK-----CDVYSYGILLLETFSRK 369
APE ++++K D++S G +L E S +
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILS 236
+G G++G V + D N VAIK + +T+ E ++L RH N+I I
Sbjct: 31 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-- 86
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHAL 292
N +A +E M + + + L + + L +I + L L Y H+
Sbjct: 87 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS- 142
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVST 351
A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 352 K-----CDVYSYGILLLETFSRK 369
K D++S G +L E S +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 180 LLGIGSFGS--VYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRN--LIK 233
L IGS GS V++ AIK NL+ +T S+ +E L ++ + +I+
Sbjct: 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ + +V+E N L WL +D ER + ++ LE +H H
Sbjct: 74 LYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNM---LEAVHTIHQHG 128
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----- 348
I+H DLKP+N L+ + M+ + DFGI+ + S+++ + T+ YM PE I
Sbjct: 129 -IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 349 ----------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+S K DV+S G +L K P + +NQ KL ++D
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--------INQI--SKLHAIIDP 236
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCME-SPDERI 433
N E F D + + L CC++ P +RI
Sbjct: 237 N---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 266
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 169 QRATNEFDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLER------TFVSFNSECE 221
Q+ + +D LG G F V K S G A K + R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+LR V H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 282 ALEYLHYGHALAPIIHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSLIQTKTM 337
+ YLH I H DLKP NI LLD+N+ + H+ DFG++ E +D +
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 338 ATIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 126/299 (42%), Gaps = 56/299 (18%)
Query: 167 DIQRATNEFDECN---------LLGIGSFGS--VYKGTLSDGTNVAIKIFNLQL--ERTF 213
D +A++ +EC L IGS GS V++ AIK NL+ +T
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 214 VSFNSECEVLRNVRHRN--LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILE 271
S+ +E L ++ + +I++ + +V+E N L WL +D E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWE 156
Query: 272 RLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331
R + ++ LE +H H I+H DLKP+N L+ + M+ + DFGI+ + S+
Sbjct: 157 RKSYWKNM---LEAVHTIHQHG-IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSV 211
Query: 332 IQTKTMATIGYMAPEGIVSTKC---------------DVYSYG-ILLLETFSRKKPTNDL 375
++ + T+ YM PE I DV+S G IL T+
Sbjct: 212 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY--------- 262
Query: 376 GEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCME-SPDERI 433
G+ + +NQ KL ++D N E F D + + L CC++ P +RI
Sbjct: 263 GKTPFQQIINQI--SKLHAIIDPN---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 313
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 180 LLGIGSFGS--VYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRN--LIK 233
L IGS GS V++ AIK NL+ +T S+ +E L ++ + +I+
Sbjct: 17 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 76
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ + +V+E N L WL +D ER + ++ LE +H H
Sbjct: 77 LYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNM---LEAVHTIHQHG 131
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----- 348
I+H DLKP+N L+ + M+ + DFGI+ + S+++ + T+ YM PE I
Sbjct: 132 -IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 349 ----------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+S K DV+S G +L K P + +NQ KL ++D
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--------FQQIINQI--SKLHAIIDP 239
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCME-SPDERI 433
N E F D + + L CC++ P +RI
Sbjct: 240 N---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 269
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 28/212 (13%)
Query: 175 FDECNLLGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRN 230
+ + +G G++G V + D N VAIK + +T+ E ++L RH N
Sbjct: 25 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN------IMIDVGLAL 283
+I I N +A +E M + + + L + Y L + L+ + + L
Sbjct: 83 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGY 342
+Y+H A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y
Sbjct: 138 KYIHS----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 343 MAPEGIVSTK-----CDVYSYGILLLETFSRK 369
APE ++++K D++S G +L E S +
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILS 236
+G G++G V + D N VAIK + +T+ E ++L RH N+I I
Sbjct: 31 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-- 86
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHAL 292
N +A +E M + + + L + + L +I + L L Y H+
Sbjct: 87 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS- 142
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVST 351
A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 352 K-----CDVYSYGILLLETFSRK 369
K D++S G +L E S +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 181 LGIGSFGSV----YKGTLSDGTNVAIKIFNLQLERTFVS---FNSECEVLRNVRHRNLIK 233
LG G F V KGT + IK L R VS E +LR +RH N+I
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 234 ILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGLALEYLHY 288
+ N L+LE + G L EK + + L+++ L+ +HY
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI---------LDGVHY 144
Query: 289 GHALAPIIHCDLKPSNI-LLDENM---VAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
H+ I H DLKP NI LLD+N+ + DFGI+ + G++ T ++A
Sbjct: 145 LHS-KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVA 200
Query: 345 PEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS 387
PE + + + D++S G++ S P LGE + N S
Sbjct: 201 PEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGETKQETLTNIS 245
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 169 QRATNEFDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLER------TFVSFNSECE 221
Q+ + +D LG G F V K S G A K + R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+LR V H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 282 ALEYLHYGHALAPIIHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSLIQTKTM 337
+ YLH I H DLKP NI LLD+N+ + H+ DFG++ E +D +
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 338 ATIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 45/276 (16%)
Query: 180 LLGIGSFGS--VYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRN--LIK 233
L IGS GS V++ AIK NL+ +T S+ +E L ++ + +I+
Sbjct: 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ + +V+E N L WL +D ER + ++ LE +H H
Sbjct: 93 LYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNM---LEAVHTIHQHG 147
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTKC 353
I+H DLKP+N L+ + M+ + DFGI+ + S+++ + T+ YM PE I
Sbjct: 148 -IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 354 ---------------DVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
DV+S G +L K P + +NQ KL ++D
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--------FQQIINQI--SKLHAIIDP 255
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCME-SPDERI 433
N E F D + + L CC++ P +RI
Sbjct: 256 N---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 285
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 30/206 (14%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR------HRNLIK 233
+G G+F V + G VA+KI +++T ++ +S ++ R VR H N++K
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKI----IDKTQLNSSSLQKLFREVRIXKVLNHPNIVK 77
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ LV E+ G + +L +H + R V A++Y H
Sbjct: 78 LFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS-AVQYCHQKF--- 133
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG---YMAPEGIVS 350
I+H DLK N+LLD + ++DFG S G+ K A G Y APE
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN------KLDAFCGAPPYAAPELFQG 186
Query: 351 TK-----CDVYSYGILLLETFSRKKP 371
K DV+S G++L S P
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 169 QRATNEFDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLER------TFVSFNSECE 221
Q+ + +D LG G F V K S G A K + R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+LR V H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 282 ALEYLHYGHALAPIIHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSLIQTKTM 337
+ YLH I H DLKP NI LLD+N+ + H+ DFG++ E +D +
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 338 ATIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 24/196 (12%)
Query: 181 LGIGSFGSVYKGT--LSDGTNVAIKIFNLQLER-TFVSFNSECEVLRNVRHRNLIKILSG 237
LG G++ +VYKG L+D VA+K L+ E + E +L++++H N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
LV E++ + L+++L +I+ N+ + + L L Y H ++H
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCHR-QKVLH 123
Query: 298 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT----MATIGYMAPEGIV---- 349
DLKP N+L++E ++DFG+++ I TKT + T+ Y P+ ++
Sbjct: 124 RDLKPQNLLINERGELKLADFGLARAKS------IPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 350 -STKCDVYSYGILLLE 364
ST+ D++ G + E
Sbjct: 178 YSTQIDMWGVGCIFYE 193
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAIK + +T+ E ++L RH N+I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN------IMIDVGLALEYLHYGHA 291
N +A +E M + + + L + Y L + L+ + + L+Y+H
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 146
Query: 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVS 350
A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE +++
Sbjct: 147 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 351 TK-----CDVYSYGILLLETFSRK 369
+K D++S G +L E S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 165 YLDIQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSFNSECEVL 223
+ D+ + T+E LLG G++ V +L +G A+KI Q + E E L
Sbjct: 10 FEDMYKLTSE-----LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETL 64
Query: 224 RNVR-HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLA 282
+ ++N+++++ + LV E + GS+ + +F + E ++ DV A
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNE-REASRVVRDVAAA 123
Query: 283 LEYLHYGHALAPIIHCDLKPSNILLDE-NMVAHVS----DFGISKLLGEGDDSLIQTKTM 337
L++LH I H DLKP NIL + V+ V D G L + +
Sbjct: 124 LDFLH----TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 338 ATIG---YMAPEGI---------VSTKCDVYSYGILLLETFSRKKP 371
G YMAPE + +CD++S G++L S P
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 181 LGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240
LG G FG V++ + + F V E +L RHRN++ + +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300
++ ++ EF+ + + + + + L+ E ++ + V AL++LH H + H D+
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH-SHNIG---HFDI 128
Query: 301 KPSNILLDENMVAHVS--DFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCD 354
+P NI+ + + +FG ++ L GD+ + Y APE +VST D
Sbjct: 129 RPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL---LFTAPEYYAPEVHQHDVVSTATD 185
Query: 355 VYSYGILL 362
++S G L+
Sbjct: 186 MWSLGTLV 193
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILS 236
+G G++G V + D N VAIK + +T+ E ++L RH N+I I
Sbjct: 33 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-- 88
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHAL 292
N +A +E M + + + L + + L +I + L L Y H+
Sbjct: 89 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS- 144
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVST 351
A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 352 K-----CDVYSYGILLLETFSRK 369
K D++S G +L E S +
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 169 QRATNEFDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLER------TFVSFNSECE 221
Q+ + +D LG G F V K S G A K + R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+LR V H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 282 ALEYLHYGHALAPIIHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSLIQTKTM 337
+ YLH I H DLKP NI LLD+N+ + H+ DFG++ E +D +
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 338 ATIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 180 LLGIGSFGS--VYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRN--LIK 233
L IGS GS V++ AIK NL+ +T S+ +E L ++ + +I+
Sbjct: 13 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 72
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ + +V+E N L WL +D ER + ++ LE +H H
Sbjct: 73 LYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNM---LEAVHTIHQHG 127
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----- 348
I+H DLKP+N L+ + M+ + DFGI+ + S+++ + T+ YM PE I
Sbjct: 128 -IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 349 ----------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
+S K DV+S G +L K P + +NQ KL ++D
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--------INQI--SKLHAIIDP 235
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCME-SPDERI 433
N E F D + + L CC++ P +RI
Sbjct: 236 N---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 265
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILS 236
+G G++G V + D N VAIK + +T+ E ++L RH N+I I
Sbjct: 39 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-- 94
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHAL 292
N +A +E M + + + L + + L +I + L L Y H+
Sbjct: 95 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS- 150
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVST 351
A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 352 K-----CDVYSYGILLLETFSRK 369
K D++S G +L E S +
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILS 236
+G G++G V + D N VAIK + +T+ E ++L RH N+I I
Sbjct: 31 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-- 86
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHAL 292
N +A +E M + + + L + + L +I + L L Y H+
Sbjct: 87 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS- 142
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVST 351
A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 352 K-----CDVYSYGILLLETFSRK 369
K D++S G +L E S +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 181 LGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILS 236
+G G++G V + D N VAIK + +T+ E ++L RH N+I I
Sbjct: 51 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-- 106
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN------IMIDVGLALEYLHYG 289
N +A +E M + + + L + Y L + L+ + + L+Y+H
Sbjct: 107 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS- 162
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGI 348
A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE +
Sbjct: 163 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 349 VSTK-----CDVYSYGILLLETFSRK 369
+++K D++S G +L E S +
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAIK + +T+ E ++L RH N+I I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHALAP 294
N +A +E M + + + L + + L +I + L L Y H+ A
Sbjct: 85 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-AN 142
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVSTK- 352
++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++K
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 353 ----CDVYSYGILLLETFSRK 369
D++S G +L E S +
Sbjct: 203 YTKSIDIWSVGCILAEMLSNR 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAIK + +T+ E ++L RH N+I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHALAP 294
N +A +E M + + + L + + L +I + L L Y H+ A
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS-AN 148
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVSTK- 352
++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 353 ----CDVYSYGILLLETFSRK 369
D++S G +L E S +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 175 FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLI 232
+ + +G G++G V + + VAIK + +T+ E ++L RH N+I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN------IMIDVGLALEY 285
I N +A +E M + + + L + Y L + L+ + + L+Y
Sbjct: 89 GI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMA 344
+H A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y A
Sbjct: 144 IHS----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 345 PEGIVSTK-----CDVYSYGILLLETFSRK 369
PE ++++K D++S G +L E S +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + FG+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAIK + +T+ E ++L RH N+I I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHALAP 294
N +A +E M + + + L + + L +I + L L Y H+ A
Sbjct: 92 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-AN 149
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVSTK- 352
++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++K
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 353 ----CDVYSYGILLLETFSRK 369
D++S G +L E S +
Sbjct: 210 YTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAIK + +T+ E ++L RH N+I I
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 92
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHALAP 294
N +A +E M + + + L + + L +I + L L Y H+ A
Sbjct: 93 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-AN 150
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVSTK- 352
++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++K
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 353 ----CDVYSYGILLLETFSRK 369
D++S G +L E S +
Sbjct: 211 YTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAIK + +T+ E ++L RH N+I I
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 83
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHALAP 294
N +A +E M + + + L + + L +I + L L Y H+ A
Sbjct: 84 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-AN 141
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVSTK- 352
++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++K
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 353 ----CDVYSYGILLLETFSRK 369
D++S G +L E S +
Sbjct: 202 YTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAIK + +T+ E ++L RH N+I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHALAP 294
N +A +E M + + + L + + L +I + L L Y H+ A
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-AN 148
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVSTK- 352
++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 353 ----CDVYSYGILLLETFSRK 369
D++S G +L E S +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTN-VAIKIFNLQLERTFVSFNSECEV--LRNVRHR 229
++++ +G G++G+V+K + VA+K L + V ++ E+ L+ ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 230 NLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYG 289
N++++ + LV EF + L+K+ S N LD + + + L + H
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE--- 346
+ ++H DLKP N+L++ N +++FG+++ G + + T+ Y P+
Sbjct: 121 N----VLHRDLKPQNLLINRNGELKLANFGLARAFGI--PVRCYSAEVVTLWYRPPDVLF 174
Query: 347 --GIVSTKCDVYSYGILLLETFSRKKP 371
+ ST D++S G + E + +P
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAIK + +T+ E ++L RH N+I I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHALAP 294
N +A +E M + + + L + + L +I + L L Y H+ A
Sbjct: 85 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-AN 142
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVSTK- 352
++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++K
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 353 ----CDVYSYGILLLETFSRK 369
D++S G +L E S +
Sbjct: 203 YTKSIDIWSVGCILAEMLSNR 223
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 23/208 (11%)
Query: 169 QRATNEFDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLERTFV------SFNSECE 221
Q+ + +D LG G F V K S G A K + R E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 222 VLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+LR V H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 282 ALEYLHYGHALAPIIHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSLIQTKTM 337
+ YLH I H DLKP NI LLD+N+ + H+ DFG++ E +D +
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 338 ATIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 86 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLXQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + D G+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILS 236
+G G++G V + D N VAIK + +T+ E ++L RH N+I I
Sbjct: 33 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI-- 88
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHAL 292
N +A +E M + + + L + + L +I + L L Y H+
Sbjct: 89 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS- 144
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVST 351
A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 352 K-----CDVYSYGILLLETFSRK 369
K D++S G +L E S +
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 86 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLXQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 181 LGIGSFGSVYKGTLSDGTN---VAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILS 236
+G G++G V + D N VAIK + +T+ E ++L RH N+I I
Sbjct: 33 IGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI-- 88
Query: 237 GCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN------IMIDVGLALEYLHYG 289
N +A +E M + + + L + Y L + L+ + + L+Y+H
Sbjct: 89 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS- 144
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGI 348
A ++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE +
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 349 VSTK-----CDVYSYGILLLETFSRK 369
+++K D++S G +L E S +
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 40/262 (15%)
Query: 140 RCQNRSTKKSDEEDLLPLVTWRRISYL---DIQRATNEFDECNLLGIGSFGSVYKGTLSD 196
R + S K D E +L + + Y ++ AT++ LG GSFG V++ + D
Sbjct: 42 RSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHR--MED 95
Query: 197 ---GTNVAIKIFNLQLERTFVSFNSE----CEVLRNVRHRNLIKILSGCSNLDFKALVLE 249
G A+K L++ F +E C L + R ++ + + + +E
Sbjct: 96 KQTGFQCAVKKVRLEV------FRAEELMACAGLTSPR---IVPLYGAVREGPWVNIFME 146
Query: 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE 309
+ GSL + + L + +G ALE L Y H+ I+H D+K N+LL
Sbjct: 147 LLEGGSLGQLVKEQG----CLPEDRALYYLGQALEGLEYLHSRR-ILHGDVKADNVLLSS 201
Query: 310 NMV-AHVSDFGISKLL---GEGDDSLIQTKTMATIGYMAPEGIVSTKC----DVYSYGIL 361
+ A + DFG + L G G D L T +MAPE ++ C DV+S +
Sbjct: 202 DGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCM 261
Query: 362 LLETFSRKKPTNDL--GEMSLK 381
+L + P G + LK
Sbjct: 262 MLHMLNGCHPWTQFFRGPLCLK 283
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + D G+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 180 LLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL-----ERTFVSFNSECEVLRNVRHRNLIK 233
LG G F ++ + +D V A KI L +R +S E + R++ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVG 85
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ DF +VLE SL + L+ L E + + L +YLH
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 141
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSLIQTKTM-ATIGYMAPEGIV-- 349
+IH DLK N+ L+E++ + DFG+ +K+ +G+ + KT+ T Y+APE +
Sbjct: 142 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----RKKTLCGTPNYIAPEVLSKK 196
Query: 350 --STKCDVYSYGILLLETFSRKKP--TNDLGEMSLKHWVNQ-SLPHKLAEVVDS 398
S + DV+S G ++ K P T+ L E L+ N+ S+P + V S
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 250
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 180 LLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL-----ERTFVSFNSECEVLRNVRHRNLIK 233
LG G F ++ + +D V A KI L +R +S E + R++ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVG 81
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ DF +VLE SL + L+ L E + + L +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 137
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSLIQTKTM-ATIGYMAPEGIV-- 349
+IH DLK N+ L+E++ + DFG+ +K+ +G+ + KT+ T Y+APE +
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----RKKTLCGTPNYIAPEVLSKK 192
Query: 350 --STKCDVYSYGILLLETFSRKKP--TNDLGEMSLKHWVNQ-SLPHKLAEVVDS 398
S + DV+S G ++ K P T+ L E L+ N+ S+P + V S
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 246
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + DF +++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G+++ E
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G+++ E
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 168 IQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIFNLQLERTFVSF------NSEC 220
I + + +G G++GSV G VA+K +L R F S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEK----WLYSHNYFLDI------- 269
+L++++H N+I +L F P SLE+ +L +H D+
Sbjct: 73 RLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 270 -LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328
L ++ + L L Y H+ A IIH DLKPSN+ ++E+ + D G+++ D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTD 176
Query: 329 DSLIQTKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFS 367
D + T +AT Y APE ++ + D++S G ++ E +
Sbjct: 177 DEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAI+ + +T+ E ++L RH N+I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHALAP 294
N +A +E M + + + L + + L +I + L L Y H+ A
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-AN 148
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVSTK- 352
++H DLKPSN+LL+ + DFG++++ + D + T+ +AT Y APE ++++K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 353 ----CDVYSYGILLLETFSRK 369
D++S G +L E S +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 180 LLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL-----ERTFVSFNSECEVLRNVRHRNLIK 233
LG G F ++ + +D V A KI L +R +S E + R++ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVG 81
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ DF +VLE SL + L+ L E + + L +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 137
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSLIQTKTM-ATIGYMAPEGIV-- 349
+IH DLK N+ L+E++ + DFG+ +K+ +G+ + KT+ T Y+APE +
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----RKKTLCGTPNYIAPEVLSKK 192
Query: 350 --STKCDVYSYGILLLETFSRKKP--TNDLGEMSLKHWVNQ-SLPHKLAEVVDS 398
S + DV+S G ++ K P T+ L E L+ N+ S+P + V S
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 246
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 86 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 35/207 (16%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS------FNSECEVLRNVRHRNLIK 233
+G G++GSV G VAIK +L R F S E +L++++H N+I
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIK----KLSRPFQSEIFAKRAYRELLLLKHMQHENVIG 105
Query: 234 IL------SGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+L S N LV+ FM L+K + + + ++ L + GL +Y+H
Sbjct: 106 LLDVFTPASSLRNFYDFYLVMPFM-QTDLQK-IMGMEFSEEKIQYLVYQMLKGL--KYIH 161
Query: 288 YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG 347
A ++H DLKP N+ ++E+ + DFG+++ D + T + T Y APE
Sbjct: 162 S----AGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEM--TGYVVTRWYRAPEV 212
Query: 348 IVS-----TKCDVYSYGILLLETFSRK 369
I+S D++S G ++ E + K
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 86 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLXQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 181 LGIGSFGSVYKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVLRNVR-HRNLIKILSG 237
LG GSF S+ + + +N A+KI + ++E + E L+ H N++K+
Sbjct: 19 LGEGSF-SICRKCVHKKSNQAFAVKIISKRME---ANTQKEITALKLCEGHPNIVKLHEV 74
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
+ LV+E + G L + + +F + E IM + A+ ++H ++H
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMHD----VGVVH 129
Query: 298 CDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VS 350
DLKP N+L ++N+ + DFG ++ L D+ ++T T+ Y APE +
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFAR-LKPPDNQPLKTPCF-TLHYAAPELLNQNGYD 187
Query: 351 TKCDVYSYGILLLETFSRKKP 371
CD++S G++L S + P
Sbjct: 188 ESCDLWSLGVILYTMLSGQVP 208
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 43/211 (20%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS------FNSECEVLRNVRHRNLIK 233
+G G++GSV G VAIK +L R F S E +L++++H N+I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIK----KLSRPFQSEIFAKRAYRELLLLKHMQHENVIG 87
Query: 234 IL------SGCSNLDFKALVLEFMPNGSLEKWL---YSHNYFLDILERLNIMIDVGL-AL 283
+L S N LV+ FM L+K + +S E++ ++ L L
Sbjct: 88 LLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGLKFSE-------EKIQYLVYQMLKGL 139
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
+Y+H A ++H DLKP N+ ++E+ + DFG+++ D + T + T Y
Sbjct: 140 KYIHS----AGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEM--TGYVVTRWYR 190
Query: 344 APEGIVS-----TKCDVYSYGILLLETFSRK 369
APE I+S D++S G ++ E + K
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 79 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLXQVIQMELDHERMSYL 124
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 125 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVT 181
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIK-IFN-----LQLERTFVSFNSECEVLRNVRHRNLIK 233
LG G++G V+K G VA+K IF+ +RTF E+ + NL+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+L ++ D LV ++M L + ++ L+ + + ++ + ++YLH G
Sbjct: 77 VLRADNDRDV-YLVFDYMET-DLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG---- 128
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGE-------------------GDDSLIQT 334
++H D+KPSNILL+ V+DFG+S+ DD I T
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 335 KTMATIGYMAPEGIV-STK----CDVYSYGILLLETFSRK 369
+AT Y APE ++ STK D++S G +L E K
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 81/207 (39%), Gaps = 29/207 (14%)
Query: 173 NEFDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV----- 226
F + LG GS+G V+K + DG A+K R+ F + R +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK-------RSMSPFRGPKDRARKLAEVGS 109
Query: 227 -----RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGL 281
+H +++ L E SL++ + L + + D L
Sbjct: 110 HEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLL 168
Query: 282 ALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIG 341
AL +LH ++H D+KP+NI L + DFG+ LG +Q
Sbjct: 169 ALAHLHS----QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPR 221
Query: 342 YMAPE---GIVSTKCDVYSYGILLLET 365
YMAPE G T DV+S G+ +LE
Sbjct: 222 YMAPELLQGSYGTAADVFSLGLTILEV 248
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 125/299 (41%), Gaps = 56/299 (18%)
Query: 167 DIQRATNEFDECN---------LLGIGSFGS--VYKGTLSDGTNVAIKIFNLQL--ERTF 213
D +A++ +EC L IGS GS V++ AIK NL+ +T
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 214 VSFNSECEVLRNVRHRN--LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILE 271
S+ +E L ++ + +I++ + +V+E N L WL +D E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWE 156
Query: 272 RLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331
R + ++ LE +H H I+H DLKP+N L+ + M+ + DFGI+ + S+
Sbjct: 157 RKSYWKNM---LEAVHTIHQHG-IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSV 211
Query: 332 IQTKTMATIGYMAPEGIVSTKC---------------DVYSYG-ILLLETFSRKKPTNDL 375
++ + + YM PE I DV+S G IL T+
Sbjct: 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY--------- 262
Query: 376 GEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCME-SPDERI 433
G+ + +NQ KL ++D N E F D + + L CC++ P +RI
Sbjct: 263 GKTPFQQIINQI--SKLHAIIDPN---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 313
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLSDGTN-VAIKIFNLQL--ERTFVSFNSECEVLRNV 226
R T+++ LG G+F V + T A KI N + R E + R +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+H N++++ S F LV + + G L + + + Y+ + + + LE +
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIHQILESV 143
Query: 287 HYGHALAPIIHCDLKPSNILLD---ENMVAHVSDFGIS-KLLGEGDDSLIQTKTMATIGY 342
++ H I+H DLKP N+LL + ++DFG++ ++ GE T GY
Sbjct: 144 NHIHQ-HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF---GFAGTPGY 199
Query: 343 MAPEGI----VSTKCDVYSYGILL 362
++PE + D+++ G++L
Sbjct: 200 LSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 45/276 (16%)
Query: 180 LLGIGSFGS--VYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRN--LIK 233
L IGS GS V++ AIK NL+ +T S+ +E L ++ + +I+
Sbjct: 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ + +V+E N L WL +D ER + ++ LE +H H
Sbjct: 93 LYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNM---LEAVHTIHQHG 147
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTKC 353
I+H DLKP+N L+ + M+ + DFGI+ + +++ + T+ YM PE I
Sbjct: 148 -IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 354 ---------------DVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398
DV+S G +L K P + +NQ KL ++D
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--------INQI--SKLHAIIDP 255
Query: 399 NLVRREHSFSAKMDCLLRIMNLALDCCME-SPDERI 433
N E F D + + L CC++ P +RI
Sbjct: 256 N---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 285
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 24/233 (10%)
Query: 180 LLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL-----ERTFVSFNSECEVLRNVRHRNLIK 233
LG G F ++ + +D V A KI L +R +S E + R++ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVG 103
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ DF +VLE SL + L+ L E + + L +YLH
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 159
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSLIQTKTMATIGYMAPEGIV--- 349
+IH DLK N+ L+E++ + DFG+ +K+ +G+ + T Y+APE +
Sbjct: 160 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 215
Query: 350 -STKCDVYSYGILLLETFSRKKP--TNDLGEMSLKHWVNQ-SLPHKLAEVVDS 398
S + DV+S G ++ K P T+ L E L+ N+ S+P + V S
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 268
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAIK + +T+ E ++L RH N+I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHALAP 294
N +A +E M + + + L + + L +I + L L Y H+ A
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-AN 148
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVSTK- 352
++H DLKPSN+LL+ + DFG++++ + D + + +AT Y APE ++++K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 353 ----CDVYSYGILLLETFSRK 369
D++S G +L E S +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 181 LGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFN-SECEVLRNVRHRNLIKILSGC 238
+G G++G V + + VAIK + +T+ E ++L RH N+I I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 239 SNLDFKALVLEFMPNGSLEKWLYSHNYF----LDILERLNIMIDVGLALEYLHYGHALAP 294
N +A +E M + + + L + + L +I + L L Y H+ A
Sbjct: 92 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-AN 149
Query: 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSLIQTKTMATIGYMAPEGIVSTK- 352
++H DLKPSN+LL+ + DFG++++ + D + + +AT Y APE ++++K
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 353 ----CDVYSYGILLLETFSRK 369
D++S G +L E S +
Sbjct: 210 YTKSIDIWSVGCILAEMLSNR 230
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 80 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 125
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 182
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 183 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 24/233 (10%)
Query: 180 LLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL-----ERTFVSFNSECEVLRNVRHRNLIK 233
LG G F ++ + +D V A KI L +R +S E + R++ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVG 105
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ DF +VLE SL + L+ L E + + L +YLH
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 161
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSLIQTKTMATIGYMAPEGIV--- 349
+IH DLK N+ L+E++ + DFG+ +K+ +G+ + T Y+APE +
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 217
Query: 350 -STKCDVYSYGILLLETFSRKKP--TNDLGEMSLKHWVNQ-SLPHKLAEVVDS 398
S + DV+S G ++ K P T+ L E L+ N+ S+P + V S
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 270
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 80 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 125
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 182
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 183 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 31 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 85 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 130
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 131 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 187
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 188 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 87 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 132
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 189
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 86 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 79 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 124
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 181
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 86 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 87 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 132
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 189
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 124 ISLLN------------VFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 169
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 226
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 24/233 (10%)
Query: 180 LLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL-----ERTFVSFNSECEVLRNVRHRNLIK 233
LG G F ++ + +D V A KI L +R +S E + R++ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVVG 79
Query: 234 ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA 293
+ DF +VLE SL + L+ L E + + L +YLH
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 135
Query: 294 PIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSLIQTKTMATIGYMAPEGIV--- 349
+IH DLK N+ L+E++ + DFG+ +K+ +G+ + T Y+APE +
Sbjct: 136 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 191
Query: 350 -STKCDVYSYGILLLETFSRKKP--TNDLGEMSLKHWVNQ-SLPHKLAEVVDS 398
S + DV+S G ++ K P T+ L E L+ N+ S+P + V S
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS 244
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P +LE+ + Y + L N+ + + L++ +
Sbjct: 124 ISLLNV------------FTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYL 169
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 226
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPEVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G ++ E
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 172 TNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRH 228
+++++ +G G+FG V+K G VA+K ++ E+ + E ++L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 229 RNLIKILSGCSNLDFKA-----------LVLEFMPN---GSLEKWLYSHNYFLDILERLN 274
N++ ++ C KA LV +F + G L L + L ++R+
Sbjct: 77 ENVVNLIEICRT---KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVM 131
Query: 275 IMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQ- 333
M+ GL Y+H I+H D+K +N+L+ + V ++DFG+++ +S
Sbjct: 132 QMLLNGLY--YIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 334 -TKTMATIGYMAPEGIVSTK-----CDVYSYGILLLETFSR 368
+ T+ Y PE ++ + D++ G ++ E ++R
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G ++ E
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 15/99 (15%)
Query: 271 ERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEG 327
E IM D+G A+++LH H +A H D+KP N+L +++ V ++DFG +K E
Sbjct: 110 EAAEIMRDIGTAIQFLH-SHNIA---HRDVKPENLLYTSKEKDAVLKLTDFGFAK---ET 162
Query: 328 DDSLIQTKTMATIGYMAPEGIVSTK----CDVYSYGILL 362
+ +QT T Y+APE + K CD++S G+++
Sbjct: 163 TQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 268 DILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327
DIL + I + + ALE+LH + +IH D+KPSN+L++ DFGIS L
Sbjct: 136 DILGK--IAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLV-- 188
Query: 328 DDSLIQTKTMATIGYMAPEGI--------VSTKCDVYSYGILLLETFSRKKPTNDLGE-- 377
D + + Y APE I S K D++S GI +E + P + G
Sbjct: 189 -DDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPF 247
Query: 378 MSLKHWVNQSLPHKLAEVVDSNLV 401
LK V + P A+ + V
Sbjct: 248 QQLKQVVEEPSPQLPADKFSAEFV 271
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 15/99 (15%)
Query: 271 ERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEG 327
E IM D+G A+++LH H +A H D+KP N+L +++ V ++DFG +K E
Sbjct: 129 EAAEIMRDIGTAIQFLH-SHNIA---HRDVKPENLLYTSKEKDAVLKLTDFGFAK---ET 181
Query: 328 DDSLIQTKTMATIGYMAPEGIVSTK----CDVYSYGILL 362
+ +QT T Y+APE + K CD++S G+++
Sbjct: 182 TQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G ++ E
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 173 NEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL---ERTFVSFNSECEVL-RNVR 227
++F ++G GSFG V ++ A+K+ + ++ SE VL +NV+
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
H L+ + D VL+++ G L L FL+ R ++ AL YLH
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH 156
Query: 288 YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMAPE 346
+ I++ DLKP NILLD ++DFG+ K E + T T T Y+APE
Sbjct: 157 SLN----IVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPE 209
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 172 TNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRH 228
+++++ +G G+FG V+K G VA+K ++ E+ + E ++L+ ++H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 229 RNLIKILSGCSNLDFKA-----------LVLEFMPN---GSLEKWLYSHNYFLDILERLN 274
N++ ++ C KA LV +F + G L L + L ++R+
Sbjct: 76 ENVVNLIEICRT---KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVM 130
Query: 275 IMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQ- 333
M+ GL Y+H I+H D+K +N+L+ + V ++DFG+++ +S
Sbjct: 131 QMLLNGLY--YIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
Query: 334 -TKTMATIGYMAPEGIVSTK-----CDVYSYGILLLETFSR 368
+ T+ Y PE ++ + D++ G ++ E ++R
Sbjct: 185 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 33/226 (14%)
Query: 172 TNEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQ--LERTFVS------FNSECEV 222
+ ++ + LG G+FG V+ + V +K + LE ++ E +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLN------IM 276
L V H N+IK+L N F LV+E +G F+D RL+ I
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSG------LDLFAFIDRHPRLDEPLASYIF 136
Query: 277 IDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKT 336
+ A+ YL L IIH D+K NI++ E+ + DFG + L G L T
Sbjct: 137 RQLVSAVGYLR----LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG--KLFYT-F 189
Query: 337 MATIGYMAPEGIVST-----KCDVYSYGILLLETFSRKKPTNDLGE 377
TI Y APE ++ + +++S G+ L + P +L E
Sbjct: 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE 235
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G ++ E
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 80 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYL 125
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVT 182
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 183 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 91 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYL 136
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 137 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVT 193
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 194 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G ++ E
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 172 TNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRH 228
+++++ +G G+FG V+K G VA+K ++ E+ + E ++L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 229 RNLIKILSGCSNLDFKA-----------LVLEFMPN---GSLEKWLYSHNYFLDILERLN 274
N++ ++ C KA LV +F + G L L + L ++R+
Sbjct: 77 ENVVNLIEICRT---KASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVM 131
Query: 275 IMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQ- 333
M+ GL Y+H I+H D+K +N+L+ + V ++DFG+++ +S
Sbjct: 132 QMLLNGLY--YIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 334 -TKTMATIGYMAPEGIVSTK-----CDVYSYGILLLETFSR 368
+ T+ Y PE ++ + D++ G ++ E ++R
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 172 TNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRH 228
+++++ +G G+FG V+K G VA+K ++ E+ + E ++L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 229 RNLIKILSGCSNLDFKA-----------LVLEFMPN---GSLEKWLYSHNYFLDILERLN 274
N++ ++ C KA LV +F + G L L + L ++R+
Sbjct: 77 ENVVNLIEICRT---KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVM 131
Query: 275 IMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQ- 333
M+ GL Y+H I+H D+K +N+L+ + V ++DFG+++ +S
Sbjct: 132 QMLLNGLY--YIHRNK----ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 334 -TKTMATIGYMAPEGIVSTK-----CDVYSYGILLLETFSR 368
+ T+ Y PE ++ + D++ G ++ E ++R
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G ++ E
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 87 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYL 132
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVT 189
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G ++ E
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGE 218
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G ++ E
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 181 LGIGSFGSVYKGTLSD--------GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLI 232
LG G+F ++KG + T V +K+ + SF ++ + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL 292
C D LV EF+ GSL+ +L + ++IL +L + + A+ +L
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN--- 132
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM--ATIGYMAPEGIVS 350
+IH ++ NILL + KL G + K + I ++ PE I +
Sbjct: 133 -TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 351 TK-----CDVYSYGILLLETFS 367
K D +S+G L E S
Sbjct: 192 PKNLNLATDKWSFGTTLWEICS 213
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Query: 181 LGIGSFGSVYKGTLSD--------GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLI 232
LG G+F ++KG + T V +K+ + SF ++ + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 233 KILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL 292
C D LV EF+ GSL+ +L + ++IL +L + + A+ +L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEEN--- 132
Query: 293 APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM--ATIGYMAPEGIVS 350
+IH ++ NILL + KL G + K + I ++ PE I +
Sbjct: 133 -TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 351 TK-----CDVYSYGILLLETFS 367
K D +S+G L E S
Sbjct: 192 PKNLNLATDKWSFGTTLWEICS 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 25/237 (10%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD--GTNVAIKIFNLQLERTFVSFNSEC-----EVLRN 225
+F+ +LG GSFG V L+D GT I L+ + + EC VL
Sbjct: 19 TDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 226 VRHRNLIKILSGC-SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
+ + L C +D V+E++ G L + F + + + ++ + L
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP-QAVFYAAEISIGLF 134
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344
+LH II+ DLK N++LD ++DFG+ K D + + T Y+A
Sbjct: 135 FLHK----RGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIA 188
Query: 345 PEGIV----STKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWV---NQSLPHKLAE 394
PE I D ++YG+LL E + + P + E L + N S P L++
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSK 245
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 24/125 (19%)
Query: 253 NGSLEKWLYSHNYFLDILER----LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD 308
NGS+ + S LD ++R NIM + AL YLH I H D+KP N L
Sbjct: 151 NGSIHGFRES----LDFVQREKLISNIMRQIFSALHYLHN----QGICHRDIKPENFLFS 202
Query: 309 ENMVAHVS--DFGISK---LLGEGDDSLIQTKTMATIGYMAPEGIVST------KCDVYS 357
N + DFG+SK L G+ + TK T ++APE + +T KCD +S
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWS 261
Query: 358 YGILL 362
G+LL
Sbjct: 262 AGVLL 266
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 23/247 (9%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL---ERTFVSFNSECEVLRN 225
R + LG G F Y+ T D V A K+ + ++E + ++
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
+ + +++ + DF +VLE SL + L+ + E M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSLIQTKTM-ATIGYM 343
LH +IH DLK N+ L+++M + DFG+ +K+ +G+ + KT+ T Y+
Sbjct: 158 LHNNR----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE----RKKTLCGTPNYI 209
Query: 344 APEGIV----STKCDVYSYGILLLETFSRKKP--TNDLGEMSLKHWVNQ-SLPHKLAEVV 396
APE + S + D++S G +L K P T+ L E ++ N+ S+P + V
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 397 DSNLVRR 403
S L+RR
Sbjct: 270 -SALIRR 275
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 48/218 (22%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVS--------FNSECEVLRN 225
++ C ++G G F V + + G A+KI ++ F S E +
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA---KFTSSPGLSTEDLKREASICHM 84
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSL---------EKWLYSH----NYFLDILER 272
++H +++++L S+ +V EFM L ++YS +Y ILE
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE- 143
Query: 273 LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDD 329
AL Y H + IIH D+KP +LL + + + FG++ LGE
Sbjct: 144 ---------ALRYCHDNN----IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--S 188
Query: 330 SLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLL 363
L+ + T +MAPE + DV+ G++L
Sbjct: 189 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 226
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 48/214 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 IGLLNV------------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVT 188
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLETFSRK 369
Y APE I+ D++S G ++ E K
Sbjct: 189 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 48/218 (22%)
Query: 175 FDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVS--------FNSECEVLRN 225
++ C ++G G F V + + G A+KI ++ F S E +
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA---KFTSSPGLSTEDLKREASICHM 82
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSL---------EKWLYSH----NYFLDILER 272
++H +++++L S+ +V EFM L ++YS +Y ILE
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE- 141
Query: 273 LNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDD 329
AL Y H + IIH D+KP +LL + + + FG++ LGE
Sbjct: 142 ---------ALRYCHDNN----IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--S 186
Query: 330 SLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLL 363
L+ + T +MAPE + DV+ G++L
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 22/213 (10%)
Query: 171 ATNEFDECNLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSEC-----EVLR 224
+ F+ +LG GSFG V + + G A+K+ L+ + + EC +L
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILS 78
Query: 225 NVRHRNLIKILSGC-SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
R+ + L C D V+EF+ G L + F + R ++ AL
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISAL 137
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGY 342
+LH II+ DLK N+LLD ++DFG+ K EG + + T T T Y
Sbjct: 138 MFLHD----KGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDY 190
Query: 343 MAP----EGIVSTKCDVYSYGILLLETFSRKKP 371
+AP E + D ++ G+LL E P
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 48/209 (22%)
Query: 181 LGIGSFGSV---YKGTLSDGTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNL 231
+G G+ G V Y L NVAIK +L R F + E +++ V H+N+
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIK----KLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA 291
I +L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 88 IGLLN------------VFTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYL 133
Query: 292 L------------APIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMAT 339
L A IIH DLKPSNI++ + + DFG+++ G S + + T
Sbjct: 134 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMVPFVVT 190
Query: 340 IGYMAPEGIVST----KCDVYSYGILLLE 364
Y APE I+ D++S G ++ E
Sbjct: 191 RYYRAPEVILGMGYKENVDIWSVGCIMGE 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 43/190 (22%)
Query: 197 GTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250
G NVA+K +L R F + E +L+ V H+N+I +L+ F
Sbjct: 49 GINVAVK----KLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV------------F 92
Query: 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL------------APIIHC 298
P +LE+ + Y + L N+ + + L++ + L A IIH
Sbjct: 93 TPQKTLEE--FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV----STKCD 354
DLKPSNI++ + + DFG+++ + + T + T Y APE I+ + D
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEVILGMGYAANVD 207
Query: 355 VYSYGILLLE 364
++S G ++ E
Sbjct: 208 IWSVGCIMGE 217
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 43/190 (22%)
Query: 197 GTNVAIKIFNLQLERTFVSFN------SECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250
G NVA+K +L R F + E +L+ V H+N+I +L+ F
Sbjct: 47 GINVAVK----KLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV------------F 90
Query: 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL------------APIIHC 298
P +LE+ + Y + L N+ + + L++ + L A IIH
Sbjct: 91 TPQKTLEE--FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHR 148
Query: 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVST----KCD 354
DLKPSNI++ + + DFG+++ + + T + T Y APE I+ D
Sbjct: 149 DLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYKENVD 205
Query: 355 VYSYGILLLE 364
++S G ++ E
Sbjct: 206 IWSVGCIMGE 215
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 21/246 (8%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL---ERTFVSFNSECEVLRN 225
R + LG G F Y+ T D V A K+ + ++E + ++
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
+ + +++ + DF +VLE SL + L+ + E M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSLIQTKTMATIGYMA 344
LH +IH DLK N+ L+++M + DFG+ +K+ +G+ + T Y+A
Sbjct: 158 LHNNR----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIA 210
Query: 345 PEGIV----STKCDVYSYGILLLETFSRKKP--TNDLGEMSLKHWVNQ-SLPHKLAEVVD 397
PE + S + D++S G +L K P T+ L E ++ N+ S+P + V
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA- 269
Query: 398 SNLVRR 403
S L+RR
Sbjct: 270 SALIRR 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 21/246 (8%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL---ERTFVSFNSECEVLRN 225
R + LG G F Y+ T D V A K+ + ++E + ++
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
+ + +++ + DF +VLE SL + L+ + E M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSLIQTKTMATIGYMA 344
LH +IH DLK N+ L+++M + DFG+ +K+ +G+ + T Y+A
Sbjct: 158 LHNNR----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIA 210
Query: 345 PEGIV----STKCDVYSYGILLLETFSRKKP--TNDLGEMSLKHWVNQ-SLPHKLAEVVD 397
PE + S + D++S G +L K P T+ L E ++ N+ S+P + V
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA- 269
Query: 398 SNLVRR 403
S L+RR
Sbjct: 270 SALIRR 275
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 21/246 (8%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL---ERTFVSFNSECEVLRN 225
R + LG G F Y+ T D V A K+ + ++E + ++
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 226 VRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY 285
+ + +++ + DF +VLE SL + L+ + E M ++Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 286 LHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSLIQTKTMATIGYMA 344
LH +IH DLK N+ L+++M + DFG+ +K+ +G+ + T Y+A
Sbjct: 142 LHNNR----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIA 194
Query: 345 PEGIV----STKCDVYSYGILLLETFSRKKP--TNDLGEMSLKHWVNQ-SLPHKLAEVVD 397
PE + S + D++S G +L K P T+ L E ++ N+ S+P + V
Sbjct: 195 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA- 253
Query: 398 SNLVRR 403
S L+RR
Sbjct: 254 SALIRR 259
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 21/254 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL---ERTFVSFNSECEVLRNVRH 228
+FD ++G GS+ V L + A+K+ +L + +E V +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 229 RNLIKILSGCSNLDFKAL-VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ L C + + V+E++ G L + + R ++ LAL YLH
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 127
Query: 288 YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL-LGEGDDSLIQTKTMATIGYMAPE 346
II+ DLK N+LLD ++D+G+ K L GD + + T Y+APE
Sbjct: 128 E----RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 180
Query: 347 GI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402
+ D ++ G+L+ E + + P + +G +Q+ L +V+ +R
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP---DQNTEDYLFQVILEKQIR 237
Query: 403 REHSFSAKMDCLLR 416
S S K +L+
Sbjct: 238 IPRSLSVKAASVLK 251
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 21/254 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL---ERTFVSFNSECEVLRNVRH 228
+FD ++G GS+ V L + A+K+ +L + +E V +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 229 RNLIKILSGCSNLDFKAL-VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ L C + + V+E++ G L + + R ++ LAL YLH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 123
Query: 288 YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL-LGEGDDSLIQTKTMATIGYMAPE 346
II+ DLK N+LLD ++D+G+ K L GD + + T Y+APE
Sbjct: 124 E----RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 176
Query: 347 GI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402
+ D ++ G+L+ E + + P + +G +Q+ L +V+ +R
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP---DQNTEDYLFQVILEKQIR 233
Query: 403 REHSFSAKMDCLLR 416
S S K +L+
Sbjct: 234 IPRSLSVKAASVLK 247
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 33/207 (15%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGLA 282
H N+I + N L+LE + G L EK + + L+++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------- 123
Query: 283 LEYLHYGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMA 338
L ++Y H+L I H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 124 LNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 339 TIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 TPAFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 21/254 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL---ERTFVSFNSECEVLRNVRH 228
+FD ++G GS+ V L + A+K+ +L + +E V +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 229 RNLIKILSGCSNLDFKAL-VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ L C + + V+E++ G L + + R ++ LAL YLH
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 138
Query: 288 YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL-LGEGDDSLIQTKTMATIGYMAPE 346
II+ DLK N+LLD ++D+G+ K L GD + + T Y+APE
Sbjct: 139 E----RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 191
Query: 347 GI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402
+ D ++ G+L+ E + + P + +G +Q+ L +V+ +R
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP---DQNTEDYLFQVILEKQIR 248
Query: 403 REHSFSAKMDCLLR 416
S S K +L+
Sbjct: 249 IPRSMSVKAASVLK 262
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 181 LGIGSFGSVYKGT-LSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSG 237
LG G+F V + + G A KI N + R E + R ++H N++++
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 238 CSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIH 297
S L+ + + G L + + + Y+ + + + LE + + H + ++H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEA----DASHCIQQILEAVLHCHQMG-VVH 144
Query: 298 CDLKPSNILLDENM---VAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VS 350
DLKP N+LL + ++DFG++ + EG+ T GY++PE +
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYG 202
Query: 351 TKCDVYSYGILL 362
D+++ G++L
Sbjct: 203 KPVDLWACGVIL 214
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 43/210 (20%)
Query: 179 NLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEV------LRNVRHRNLI 232
+LLG GS+G V K L T + L+ ++ N E V LR +RH+N+I
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 233 KILSGCSNLDFKAL--VLEFMPNGSLE----------KWLYSHNYFLDILERLNIMIDVG 280
+++ N + + + V+E+ G E +H YF +++
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLID--------- 120
Query: 281 LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE--GDDSLIQTKTMA 338
LEYLH I+H D+KP N+LL +S G+++ L DD+ +
Sbjct: 121 -GLEYLHS----QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC--RTSQG 173
Query: 339 TIGYMAPE------GIVSTKCDVYSYGILL 362
+ + PE K D++S G+ L
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTL 203
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 55/249 (22%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGTLSDGT-NVAIKIFNLQLERTFVSFNSECEVLRNVRH 228
+ + ++ +L+G GS+G VY + NVAIK ++ R F +LR +
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIK----KVNRMFEDLIDCKRILREITI 80
Query: 229 RNLIK-----------ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
N +K I D +VLE + + L+K L+ FL I+
Sbjct: 81 LNRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKK-LFKTPIFLTEQHVKTILY 138
Query: 278 DVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQ---- 333
++ L +++H + IIH DLKP+N LL+++ + DFG+++ + D I
Sbjct: 139 NLLLGEKFIHE----SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLE 194
Query: 334 -------------------TKTMATIGYMAPEGIV-----STKCDVYSYGILLLETFSRK 369
T + T Y APE I+ + D++S G + E +
Sbjct: 195 EKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMM 254
Query: 370 K-----PTN 373
K PTN
Sbjct: 255 KSHINNPTN 263
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
H N+I + N L+LE + G L +L + L E + + L ++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQI---LNGVY 128
Query: 288 YGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
Y H+L I H DLKP NI LLD N+ + DFG++ + G++ T ++
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFV 184
Query: 344 APEGI----VSTKCDVYSYGIL 361
APE + + + D++S G++
Sbjct: 185 APEIVNYEPLGLEADMWSIGVI 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVA---IKIFNLQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A IK + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGLA 282
H N+I + N L+LE + G L EK + + L+++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------- 123
Query: 283 LEYLHYGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMA 338
L ++Y H+L I H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 124 LNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 339 TIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
H N+I + N L+LE + G L +L + L E + + L ++
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQI---LNGVY 127
Query: 288 YGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
Y H+L I H DLKP NI LLD N+ + DFG++ + G++ T ++
Sbjct: 128 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFV 183
Query: 344 APEGI----VSTKCDVYSYGIL 361
APE + + + D++S G++
Sbjct: 184 APEIVNYEPLGLEADMWSIGVI 205
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
H N+I + N L+LE + G L +L + L E + + L ++
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQI---LNGVY 127
Query: 288 YGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
Y H+L I H DLKP NI LLD N+ + DFG++ + G++ T ++
Sbjct: 128 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFV 183
Query: 344 APEGI----VSTKCDVYSYGIL 361
APE + + + D++S G++
Sbjct: 184 APEIVNYEPLGLEADMWSIGVI 205
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 33/207 (15%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGLA 282
H N+I + N L+LE + G L EK + + L+++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------- 123
Query: 283 LEYLHYGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMA 338
L ++Y H+L I H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 124 LNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 339 TIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 21/254 (8%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSDGTNV-AIKIFNLQL---ERTFVSFNSECEVLRNVRH 228
+FD ++G GS+ V L + A+++ +L + +E V +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 229 RNLIKILSGCSNLDFKAL-VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
+ L C + + V+E++ G L + + R ++ LAL YLH
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 170
Query: 288 YGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYMAPE 346
II+ DLK N+LLD ++D+G+ K EG T T T Y+APE
Sbjct: 171 E----RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFCGTPNYIAPE 223
Query: 347 GI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402
+ D ++ G+L+ E + + P + +G +Q+ L +V+ +R
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP---DQNTEDYLFQVILEKQIR 280
Query: 403 REHSFSAKMDCLLR 416
S S K +L+
Sbjct: 281 IPRSLSVKAASVLK 294
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 33/207 (15%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGLA 282
H N+I + N L+LE + G L EK + + L+++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------- 123
Query: 283 LEYLHYGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMA 338
L ++Y H+L I H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 124 LNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 339 TIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
H N+I + N L+LE + G L +L + L E + + L ++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQI---LNGVY 128
Query: 288 YGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
Y H+L I H DLKP NI LLD N+ + DFG++ + G++ T ++
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFV 184
Query: 344 APEGI----VSTKCDVYSYGIL 361
APE + + + D++S G++
Sbjct: 185 APEIVNYEPLGLEADMWSIGVI 206
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQ-TKTMATIGYMAPEGI----VST 351
H D+KP NIL+ + A++ DFGI+ D+ L Q T+ T+ Y APE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 352 KCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP 389
+ D+Y+ +L E + P +NQ++P
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIP 252
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 23/212 (10%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
H N+I + N L+LE + G L +L + L E + + L ++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQI---LNGVY 128
Query: 288 YGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
Y H+L I H DLKP NI LLD N+ + DFG++ + G++ T ++
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFV 184
Query: 344 APEGI----VSTKCDVYSYGILLLETFSRKKP 371
APE + + + D++S G++ S P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 45 GEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFSTESFSWNYALCG 93
G +P+ L L +L LNVS N L GEIP G + F +++ N LCG
Sbjct: 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 6 LKDLATLSLAANKFHGPIPKSFGXXXXXXXXXXXXXXXXGEIPKSLEALLYL-KQLNVSQ 64
+K L TL + N G +P S G IP S + L + +S+
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Query: 65 NRLEGEIP 72
NRL G+IP
Sbjct: 184 NRLTGKIP 191
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 33/207 (15%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGLA 282
H N+I + N L+LE + G L EK + + L+++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------- 123
Query: 283 LEYLHYGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMA 338
L ++Y H+L I H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 124 LNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 339 TIGYMAPEGI----VSTKCDVYSYGIL 361
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVL 223
L I ++ ++ +G G+FG V + +N VA+K + E+ + E
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINH 69
Query: 224 RNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
R++RH N+++ A+V+E+ G L + + + F + R +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ----QLI 125
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAH--VSDFGISKLLGEGDDSLIQTKTMATIG 341
+ Y HA+ + H DLK N LLD + + DFG SK S++ ++ +T+G
Sbjct: 126 SGVSYCHAMQ-VCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVG 178
Query: 342 ---YMAPEGIVSTK-----CDVYSYGILLLETFSRKKPTNDLGE 377
Y+APE ++ + DV+S G+ L P D E
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 33/217 (15%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGLA 282
H N+I + N L+LE + G L EK + + L+++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------- 123
Query: 283 LEYLHYGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMA 338
L ++Y H+L I H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 124 LNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 339 TIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKP 371
T ++APE + + + D++S G++ S P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 166 LDIQRATNEFDECNLLGIGSFG--SVYKGTLSDGTNVAIKIFNLQLER-TFVSFNSECEV 222
+ I ++ +D +G G+FG + + L+ VA+K +ER + N + E+
Sbjct: 13 MPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKEL-VAVKY----IERGAAIDENVQREI 67
Query: 223 L--RNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 280
+ R++RH N+++ A+++E+ G L + + + F + R
Sbjct: 68 INHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ---- 123
Query: 281 LALEYLHYGHALAPIIHCDLKPSNILLDENMVAH--VSDFGISKLLGEGDDSLIQTKTMA 338
L + Y H++ I H DLK N LLD + + DFG SK S++ ++ +
Sbjct: 124 QLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKS 176
Query: 339 TIG---YMAPEGIVSTK-----CDVYSYGILLLETFSRKKPTNDLGE 377
T+G Y+APE ++ + DV+S G+ L P D E
Sbjct: 177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE 223
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 33/217 (15%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSL-----EKWLYSHNYFLDILERLNIMIDVGLA 282
H N+I + N L+LE + G L EK + + L+++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------- 123
Query: 283 LEYLHYGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMA 338
L ++Y H+L I H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 124 LNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 339 TIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKP 371
T ++APE + + + D++S G++ S P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNV 226
R T E+ LG G+F V + + G A I N + R E + R +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+H N++++ S L+ + + G L + + + Y+ + + + LE +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA----DASHCIQQILEAV 123
Query: 287 HYGHALAPIIHCDLKPSNILLDENM---VAHVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
+ H + ++H +LKP N+LL + ++DFG++ + EG+ T GY+
Sbjct: 124 LHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQ-AWFGFAGTPGYL 180
Query: 344 APEGI----VSTKCDVYSYGILL 362
+PE + D+++ G++L
Sbjct: 181 SPEVLRKDPYGKPVDLWACGVIL 203
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 23/212 (10%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
H N+I + N L+LE + G L +L + L E + + L ++
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQI---LNGVY 128
Query: 288 YGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
Y H+L I H DLKP NI LLD N+ + DFG++ + G++ T ++
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFV 184
Query: 344 APEGI----VSTKCDVYSYGILLLETFSRKKP 371
APE + + + D++S G++ S P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 47/223 (21%)
Query: 179 NLLGIGSFGSVYKGTLSDG-TNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK---- 233
+L+G GS+G VY + NVAIK ++ R F +LR + N +K
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIK----KVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 234 -------ILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
I D +VLE + + L+K L+ FL I+ ++ L ++
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLE-IADSDLKK-LFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQ------------- 333
H + IIH DLKP+N LL+++ V DFG+++ + D+ I
Sbjct: 146 HE----SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 334 -------TKTMATIGYMAPEGIV-----STKCDVYSYGILLLE 364
T + T Y APE I+ + D++S G + E
Sbjct: 202 KNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAE 244
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLER-TFVSFNSECEV 222
L I ++ ++ +G G+FG V + N VA+K +ER + N + E+
Sbjct: 12 LPIMHDSDRYELVKDIGAGNFG-VARLMRDKQANELVAVKY----IERGEKIDENVKREI 66
Query: 223 L--RNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVG 280
+ R++RH N+++ A+V+E+ G L + + + F + R
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---- 122
Query: 281 LALEYLHYGHALAPIIHCDLKPSNILLDENMVAH--VSDFGISKLLGEGDDSLIQTKTMA 338
+ + Y HA+ + H DLK N LLD + ++DFG SK S++ ++ +
Sbjct: 123 QLISGVSYAHAMQ-VAHRDLKLENTLLDGSPAPRLKIADFGYSKA------SVLHSQPKS 175
Query: 339 TIG---YMAPEGIVSTK-----CDVYSYGILLLETFSRKKPTNDLGE 377
+G Y+APE ++ + DV+S G+ L P D E
Sbjct: 176 AVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 169 QRATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV- 226
++ + F + G G+FG+V G S G +VAIK +Q R N E ++++++
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPRFR---NRELQIMQDLA 74
Query: 227 --RHRNLIKILSGCSNLD-------FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 277
H N++++ S L + +V+E++P+ +L + NY+ + I+I
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRC--CRNYYRRQVAPPPILI 131
Query: 278 DVGLALEYLHYGHALAP---IIHCDLKPSNILLDE-NMVAHVSDFGISKLLGEGDDSLIQ 333
V L G P + H D+KP N+L++E + + DFG +K L + ++
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV-- 189
Query: 334 TKTMATIGYMAPEGIV-----STKCDVYSYGILLLE 364
+ + Y APE I +T D++S G + E
Sbjct: 190 -AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAE 224
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 52/228 (22%)
Query: 179 NLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNS------ECEVLRNVRHRNL 231
+L+G GS+G V + + VAIK ++ R F E +L + H ++
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIK----KILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 232 IKILS-----GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYL 286
+K+L D +VLE S K L+ +L L ++ ++ + ++Y+
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIA--DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 287 HYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG--------------EGDDSLI 332
H A I+H DLKP+N L++++ V DFG+++ + E D +L+
Sbjct: 173 HS----AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228
Query: 333 Q-----------TKTMATIGYMAPEGIV-----STKCDVYSYGILLLE 364
T + T Y APE I+ + DV+S G + E
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 24/239 (10%)
Query: 143 NRSTKKSDEEDLLPLVTWRRISYLDIQRATNEFDECNLLGIGSFGSVYKG-TLSDGTNVA 201
+R+ +D P W S++ +++ LG G + V++ +++ V
Sbjct: 7 SRARVYTDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVV 66
Query: 202 IKIFNLQLERTFVSFNSECEVLRNVRH-RNLIKILSGCSNLDFK--ALVLEFMPNGSLEK 258
+KI + E ++L N+R N+I + + + ALV E + N K
Sbjct: 67 VKILKPVKKN---KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF-K 122
Query: 259 WLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD-ENMVAHVSD 317
LY L +I + L+ L Y H++ I+H D+KP N+++D E+ + D
Sbjct: 123 QLYQ------TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLID 175
Query: 318 FGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTKC-----DVYSYGILLLETFSRKKP 371
+G+++ G + ++ +A+ + PE +V + D++S G +L RK+P
Sbjct: 176 WGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTN--VAIKIFNLQLERTFVSFNSECEVL 223
L I ++ ++ +G G+FG V + +N VA+K + E+ + E
Sbjct: 11 LPIMHDSDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINH 68
Query: 224 RNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLAL 283
R++RH N+++ A+V+E+ G L + + + F + R +
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ----QLI 124
Query: 284 EYLHYGHALAPIIHCDLKPSNILLDENMVAH--VSDFGISKLLGEGDDSLIQTKTMATIG 341
+ Y HA+ + H DLK N LLD + + DFG SK S++ ++ +T+G
Sbjct: 125 SGVSYCHAMQ-VCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVG 177
Query: 342 ---YMAPEGIVSTK-----CDVYSYGILLLETFSRKKPTNDLGE 377
Y+APE ++ + DV+S G+ L P D E
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 221
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 295 IIHCDLKPSNILL--DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVST- 351
IIHCDLKP NILL + + DFG S LG+ IQ++ Y +PE ++
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRF-----YRSPEVLLGMP 234
Query: 352 ---KCDVYSYGILLLE 364
D++S G +L+E
Sbjct: 235 YDLAIDMWSLGCILVE 250
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 283 LEYLHYGHALAPIIHCDLKPSNILLDENMV---AHVSDFGISKLLGEGDDSLIQTKTMAT 339
LE ++Y H I+H DLKP NILL + DFG+S+ +G + + M T
Sbjct: 141 LEGVYYLHQ-NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGT 196
Query: 340 IGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS 387
Y+APE + ++T D+++ GI+ + P +GE + + ++N S
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF--VGEDNQETYLNIS 246
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 174 EFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNS--ECEVLRNVRHRNL 231
E++ C + G G++G VYK DG + Q+E T +S ++ E +LR ++H N+
Sbjct: 23 EYEGCKV-GRGTYGHVYKAKRKDGKDDKDYALK-QIEGTGISMSACREIALLRELKHPNV 80
Query: 232 IKILSGCSNLDFKALVLEFMPNGSLEKWL---YSHNYFLDILE--------RLNIMIDVG 280
I +L F+ + + WL Y+ + I++ + + + G
Sbjct: 81 I------------SLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 281 LA-------LEYLHYGHALAPIIHCDLKPSNILL----DENMVAHVSDFGISKLLGEGDD 329
+ L+ +HY HA ++H DLKP+NIL+ E ++D G ++L
Sbjct: 129 MVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 330 SLIQ-TKTMATIGYMAPEGIVSTK-----CDVYSYGILLLETFS 367
L + T Y APE ++ + D+++ G + E +
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 45/225 (20%)
Query: 175 FDECNLLGIGSFGSVYK--GTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRN-- 230
++ + LG G+FG V + + G +VA+KI ++R + SE +VL ++ +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK-NVDRYCEAARSEIQVLEHLNTTDPN 74
Query: 231 ----LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDI-LERLNIM-IDVGLALE 284
+++L + +V E + + + N FL L+ + M + ++
Sbjct: 75 STFRCVQMLEWFEHHGHICIVFELLGLSTYD--FIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 285 YLHYGHALAPIIHCDLKPSNILL---------------DENMVAH----VSDFGISKLLG 325
+LH + H DLKP NIL DE + + V DFG +
Sbjct: 133 FLHSN----KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 326 EGDDSLIQTKTMATIGYMAPEGIV----STKCDVYSYGILLLETF 366
E +L+ T+ Y APE I+ S CDV+S G +L+E +
Sbjct: 189 EHHSTLVSTR-----HYRAPEVILALGWSQPCDVWSIGCILIEYY 228
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 88/216 (40%), Gaps = 41/216 (18%)
Query: 174 EFDECNLLGIGSFGSVYKG-TLSDGTNVAIKIF--NLQLERTFVSFNSEC--------EV 222
E+ LLG G FG+V+ G L+D VAIK+ N L + +S + C +V
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLA 282
H +I++L + LVLE + L + + F I E+ + G
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLE--------RPLPAQDLFDYITEKGPL----GEG 139
Query: 283 LEYLHYGHALAPIIHC--------DLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQ 333
+G +A I HC D+K NIL+D A + DFG LL +
Sbjct: 140 PSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP----Y 195
Query: 334 TKTMATIGYMAPEGIV-----STKCDVYSYGILLLE 364
T T Y PE I + V+S GILL +
Sbjct: 196 TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYD 231
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 295 IIHCDLKPSNILL--DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVST- 351
IIHCDLKP NILL + + DFG S LG+ IQ++ Y +PE ++
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF-----YRSPEVLLGMP 215
Query: 352 ---KCDVYSYGILLLE 364
D++S G +L+E
Sbjct: 216 YDLAIDMWSLGCILVE 231
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 295 IIHCDLKPSNILL--DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVST- 351
IIHCDLKP NILL + + DFG S LG+ IQ++ Y +PE ++
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF-----YRSPEVLLGMP 234
Query: 352 ---KCDVYSYGILLLE 364
D++S G +L+E
Sbjct: 235 YDLAIDMWSLGCILVE 250
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 181 LGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKIL---- 235
LG G G V+ +D VAIK L ++ E +++R + H N++K+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 236 -SGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEY-----LHYG 289
SG D + E N Y ++LE+ ++ + Y L Y
Sbjct: 79 PSGSQLTDDVGSLTEL--NSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYI 136
Query: 290 HALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQ-TKTMATIGYMAPEG 347
H+ A ++H DLKP+N+ ++ E++V + DFG+++++ ++ + T Y +P
Sbjct: 137 HS-ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL 195
Query: 348 IVS----TKC-DVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP 389
++S TK D+++ G + E + K E+ + +S+P
Sbjct: 196 LLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 175 FDECNLLGIGSFGSVYK-GTLSDGTNVAIKIFN---LQLERTFVS---FNSECEVLRNVR 227
+D LG G F V K S G A K + R VS E +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 228 HRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLH 287
H N+I + N L+ E + G L +L + L E + + L ++
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEATEFLKQI---LNGVY 128
Query: 288 YGHALAPIIHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSLIQTKTMATIGYM 343
Y H+L I H DLKP NI LLD N+ + DFG++ + G++ T ++
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFV 184
Query: 344 APEGI----VSTKCDVYSYGIL 361
APE + + + D++S G++
Sbjct: 185 APEIVNYEPLGLEADMWSIGVI 206
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 24/148 (16%)
Query: 221 EVLRNVRHRNLIKILSGCSNLDFKA-----LVLEFMPNGSLEKWLYSHNYFLDILERLNI 275
+ L V H ++++I + + D +V+E++ SL++ S L + E +
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR---SKGQKLPVAEAIAY 187
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTK 335
++++ AL YLH +++ DLKP NI+L E + + +S++ G
Sbjct: 188 LLEILPALSYLHS----IGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFG-------Y 236
Query: 336 TMATIGYMAPEGIVST----KCDVYSYG 359
T G+ APE IV T D+Y+ G
Sbjct: 237 LYGTPGFQAPE-IVRTGPTVATDIYTVG 263
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 295 IIHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTK 352
IIHCDLKP NILL + + + DFG S + + IQ++ Y APE I+ +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGAR 275
Query: 353 ----CDVYSYGILLLETFS 367
D++S G +L E +
Sbjct: 276 YGMPIDMWSLGCILAELLT 294
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 63/252 (25%)
Query: 165 YLDIQRATNEFDECNLLGIGSFGSVYKGT--LSDGTNVAIKIFNLQLERTFVSFNSECEV 222
Y + + +N F + +G G+F SVY T L G I + +L + +E +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 223 LRNVRHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI------M 276
L ++ + + C + ++ MP H FLDIL L+ M
Sbjct: 73 LTVAGGQDNVMGVKYCFRKNDHVVIA--MP-------YLEHESFLDILNSLSFQEVREYM 123
Query: 277 IDVGLALEYLH-YGHALAPIIHCDLKPSNILLDENMVAH-VSDFGISKLLGEGDDSL--- 331
+++ AL+ +H +G I+H D+KPSN L + + + + DFG+++ G D +
Sbjct: 124 LNLFKALKRIHQFG-----IVHRDVKPSNFLYNRRLKKYALVDFGLAQ--GTHDTKIELL 176
Query: 332 --IQTKTM-----------------------ATIGYMAPEGIVSTKC-------DVYSYG 359
+Q++ T G+ APE V TKC D++S G
Sbjct: 177 KFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPE--VLTKCPNQTTAIDMWSAG 234
Query: 360 ILLLETFSRKKP 371
++ L S + P
Sbjct: 235 VIFLSLLSGRYP 246
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 295 IIHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTK 352
IIHCDLKP NILL + + + DFG S + + IQ++ Y APE I+ +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGAR 275
Query: 353 ----CDVYSYGILLLETFS 367
D++S G +L E +
Sbjct: 276 YGMPIDMWSLGCILAELLT 294
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD--GTNVAIKIFNLQLERTFVSFNSECEVLRNV---- 226
+F+ +LG GSFG V LS+ GT+ + L+ + + EC ++
Sbjct: 341 TDFNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 227 --RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
+ L ++ S +D V+E++ G L + F + + ++ + L
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP-HAVFYAAEIAIGLF 456
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYM 343
+L II+ DLK N++LD ++DFG+ K E + TK T Y+
Sbjct: 457 FLQS----KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYI 509
Query: 344 APEGIV----STKCDVYSYGILLLETFSRKKP 371
APE I D +++G+LL E + + P
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 181 LGIGSFGSV-YKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGC- 238
LG G F V L DG A+K ++ E ++ R H N++++++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 239 --SNLDFKA-LVLEFMPNGSLEKW-----LYSHNYFLDILERLNIMIDVGLALEYLHY-G 289
+A L+L F G+L W L FL + L +++ + LE +H G
Sbjct: 97 RERGAKHEAWLLLPFFKRGTL--WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 290 HALAPIIHCDLKPSNILLDENMVAHVSDFGI---SKLLGEGDDSLIQTKTMA----TIGY 342
+A H DLKP+NILL + + D G + + EG + + A TI Y
Sbjct: 155 YA-----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 343 MAPE-------GIVSTKCDVYSYGILLLETFSRKKPTN 373
APE ++ + DV+S G +L + P +
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 173 NEFDECNLLGIGSFGSVYKGTLSD--GTNVAIKIFNLQLERTFVSFNSECEVLRNV---- 226
+F+ +LG GSFG V LS+ GT+ + L+ + + EC ++
Sbjct: 20 TDFNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 227 --RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284
+ L ++ S +D V+E++ G L + F + + ++ + L
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP-HAVFYAAEIAIGLF 135
Query: 285 YLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTM-ATIGYM 343
+L II+ DLK N++LD ++DFG+ K E + TK T Y+
Sbjct: 136 FLQS----KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYI 188
Query: 344 APEGIV----STKCDVYSYGILLLETFSRKKP 371
APE I D +++G+LL E + + P
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 30/167 (17%)
Query: 170 RATNEFDECNLLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRH 228
R N+F +G GSFG +Y GT + VAIK+ N++ + + + S+
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESK--------- 54
Query: 229 RNLIKILSGCSNL----------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 278
+ +IL G + + D+ LV++ + SLE N+ L +++
Sbjct: 55 --IYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLF---NFCSRKLSLKTVLML 108
Query: 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVA---HVSDFGISK 322
+ + + H+ + +H D+KP N L+ A ++ DFG++K
Sbjct: 109 ADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 89/215 (41%), Gaps = 53/215 (24%)
Query: 180 LLGIGSFGSVYKGT-LSDGTNVAIKIFNLQLERTFVS----------FNSECEVLRNVRH 228
LLG G FGSVY G +SD VAIK +E+ +S E +L+ V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK----HVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 229 --RNLIKILSGCSNLDFKALVLEFM-----------PNGSLEKWLYSHNYFLDILERLNI 275
+I++L D L+LE M G+L++ L + ++F +LE +
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRH 129
Query: 276 MIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSLIQT 334
+ G ++H D+K NIL+D N + DFG LL + + T
Sbjct: 130 CHNCG--------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYT 171
Query: 335 KTMATIGYMAPEGIVSTK-----CDVYSYGILLLE 364
T Y PE I + V+S GILL +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 206
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 295 IIHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTK 352
IIHCDLKP NILL + + + DFG S + IQ++ Y APE I+ +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF-----YRAPEVILGAR 275
Query: 353 ----CDVYSYGILLLETFS 367
D++S G +L E +
Sbjct: 276 YGMPIDMWSLGCILAELLT 294
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSN 304
ALV E + N ++ LY L +I + L+ L Y H++ I+H D+KP N
Sbjct: 110 ALVFEHVNNTDFKQ-LYQ------TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHN 161
Query: 305 ILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTKC-----DVYSY 358
+L+D E+ + D+G+++ G + ++ +A+ + PE +V + D++S
Sbjct: 162 VLIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDYSLDMWSL 218
Query: 359 GILLLETFSRKKP 371
G +L RK+P
Sbjct: 219 GCMLASMIFRKEP 231
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 58/237 (24%)
Query: 180 LLGIGSFGSV-YKGTLSDGTNVAIKIFNLQLERTFVSFNSECEV-LRNVR-------HRN 230
+LG GS G+V ++G+ G VA+K R + F C++ L ++ H N
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVK-------RMLIDF---CDIALMEIKLLTESDDHPN 70
Query: 231 LIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILE------RLNIMIDVGLALE 284
+I+ + F + LE + N +L+ + S N + L+ ++++ + +
Sbjct: 71 VIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 285 YLHYGHALAPIIHCDLKPSNILLD-------------ENMVAHVSDFGISKLLGEGDDSL 331
+LH IIH DLKP NIL+ EN+ +SDFG+ K L G S
Sbjct: 130 HLHS----LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 332 IQ--TKTMATIGYMAPEGI-----------VSTKCDVYSYGILLLETFSR-KKPTND 374
T G+ APE + ++ D++S G + S+ K P D
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,184,487
Number of Sequences: 62578
Number of extensions: 471614
Number of successful extensions: 3128
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 306
Number of HSP's that attempted gapping in prelim test: 1087
Number of HSP's gapped (non-prelim): 1145
length of query: 457
length of database: 14,973,337
effective HSP length: 102
effective length of query: 355
effective length of database: 8,590,381
effective search space: 3049585255
effective search space used: 3049585255
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)