Query 044428
Match_columns 457
No_of_seqs 413 out of 3778
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 04:59:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044428hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 4.3E-58 1.5E-62 438.8 16.0 255 173-448 13-290 (299)
2 4aoj_A High affinity nerve gro 100.0 1.5E-57 5.1E-62 440.9 18.8 255 173-448 41-320 (329)
3 3omv_A RAF proto-oncogene seri 100.0 2.3E-57 7.8E-62 434.0 19.1 256 173-448 36-301 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 2.2E-57 7.4E-62 435.7 15.7 251 174-445 27-304 (308)
5 3hmm_A TGF-beta receptor type- 100.0 2.4E-55 8.1E-60 422.0 15.9 272 173-448 3-298 (303)
6 4fih_A Serine/threonine-protei 100.0 1.9E-53 6.6E-58 412.0 18.8 245 173-440 74-323 (346)
7 4ase_A Vascular endothelial gr 100.0 2.5E-53 8.6E-58 414.5 18.6 259 170-449 61-349 (353)
8 4b9d_A Serine/threonine-protei 100.0 3.7E-53 1.3E-57 410.6 16.2 245 173-440 24-276 (350)
9 4g3f_A NF-kappa-beta-inducing 100.0 7.6E-53 2.6E-57 406.6 18.1 253 172-449 57-318 (336)
10 3fpq_A Serine/threonine-protei 100.0 1.6E-52 5.6E-57 397.5 19.5 243 176-440 29-282 (290)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 1E-52 3.4E-57 401.0 16.3 244 173-439 32-283 (311)
12 4fie_A Serine/threonine-protei 100.0 3.9E-52 1.3E-56 412.5 19.5 245 173-440 151-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 1.6E-51 5.3E-56 387.5 19.0 241 173-440 13-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.8E-51 6.2E-56 392.3 12.1 238 173-435 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 1.3E-49 4.4E-54 380.6 19.0 246 172-440 4-279 (299)
16 4b99_A Mitogen-activated prote 100.0 8.7E-48 3E-52 381.7 17.0 262 173-440 54-344 (398)
17 2qkw_B Protein kinase; three-h 100.0 2.9E-47 1E-51 369.6 19.6 277 162-447 28-315 (321)
18 4f9c_A Cell division cycle 7-r 100.0 9.8E-47 3.3E-51 370.2 18.4 197 168-374 16-249 (361)
19 3uim_A Brassinosteroid insensi 100.0 2.6E-46 8.8E-51 363.6 20.8 279 159-444 16-308 (326)
20 3uto_A Twitchin; kinase, muscl 100.0 3.5E-46 1.2E-50 387.6 18.9 247 173-440 157-410 (573)
21 2nru_A Interleukin-1 receptor- 100.0 4.2E-45 1.4E-49 351.9 23.6 278 159-447 11-306 (307)
22 3soc_A Activin receptor type-2 100.0 4.7E-46 1.6E-50 361.3 16.2 269 172-448 23-319 (322)
23 3s95_A LIMK-1, LIM domain kina 100.0 9.4E-45 3.2E-49 350.1 24.0 261 172-451 9-286 (310)
24 3v5w_A G-protein coupled recep 100.0 9.9E-46 3.4E-50 382.8 17.2 243 173-439 189-448 (689)
25 2psq_A Fibroblast growth facto 100.0 7.1E-45 2.4E-49 359.8 22.4 259 172-451 80-368 (370)
26 3cbl_A C-FES, proto-oncogene t 100.0 1.5E-45 5.1E-50 365.6 15.7 257 172-449 113-376 (377)
27 3ugc_A Tyrosine-protein kinase 100.0 1.2E-45 4.1E-50 353.8 14.4 271 172-449 9-293 (295)
28 3kul_A Ephrin type-A receptor 100.0 1.1E-44 3.8E-49 352.2 20.0 257 173-450 49-316 (325)
29 2qol_A Ephrin receptor; recept 100.0 4.6E-45 1.6E-49 361.4 16.5 256 173-449 45-311 (373)
30 2c30_A Serine/threonine-protei 100.0 3.9E-44 1.3E-48 347.7 22.0 257 161-440 23-294 (321)
31 3fxz_A Serine/threonine-protei 100.0 2.3E-44 7.8E-49 345.5 20.1 246 172-440 19-269 (297)
32 4hcu_A Tyrosine-protein kinase 100.0 2E-44 6.9E-49 340.6 18.6 253 173-448 10-267 (269)
33 3p86_A Serine/threonine-protei 100.0 3.8E-44 1.3E-48 345.9 19.1 256 171-449 35-300 (309)
34 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.7E-44 9.3E-49 339.4 17.3 254 172-448 7-265 (268)
35 1luf_A Muscle-specific tyrosin 100.0 2.4E-44 8.3E-49 351.9 17.0 264 169-453 43-341 (343)
36 3poz_A Epidermal growth factor 100.0 5.1E-44 1.7E-48 347.8 18.5 255 173-449 15-280 (327)
37 3gen_A Tyrosine-protein kinase 100.0 8.5E-44 2.9E-48 338.7 19.2 254 172-448 23-281 (283)
38 3fe3_A MAP/microtubule affinit 100.0 1E-43 3.5E-48 345.5 19.5 243 172-440 14-264 (328)
39 3vhe_A Vascular endothelial gr 100.0 6.1E-44 2.1E-48 351.4 17.7 266 163-449 12-357 (359)
40 3tt0_A Basic fibroblast growth 100.0 1.7E-43 5.8E-48 351.5 20.6 257 172-449 68-354 (382)
41 3op5_A Serine/threonine-protei 100.0 6.2E-44 2.1E-48 352.4 17.1 266 171-449 33-331 (364)
42 2ivs_A Proto-oncogene tyrosine 100.0 1.7E-43 5.8E-48 341.6 19.7 256 172-448 22-312 (314)
43 3l9p_A Anaplastic lymphoma kin 100.0 4.2E-44 1.4E-48 353.9 15.6 257 173-450 71-348 (367)
44 3q4u_A Activin receptor type-1 100.0 4.1E-43 1.4E-47 336.8 21.5 260 172-445 7-300 (301)
45 4eqm_A Protein kinase; transfe 100.0 2.6E-43 8.8E-48 337.7 19.8 255 173-446 11-274 (294)
46 3niz_A Rhodanese family protei 100.0 3.1E-43 1.1E-47 339.8 19.9 262 172-440 20-300 (311)
47 3lb7_A RAF proto-oncogene seri 100.0 2E-43 7E-48 340.5 18.4 258 172-449 35-302 (307)
48 1k9a_A Carboxyl-terminal SRC k 100.0 1.9E-43 6.6E-48 358.5 19.1 248 172-448 192-446 (450)
49 1mp8_A Focal adhesion kinase 1 100.0 3.7E-43 1.3E-47 334.1 19.7 256 172-450 14-279 (281)
50 1t46_A HOMO sapiens V-KIT hard 100.0 3E-43 1E-47 339.7 19.3 259 172-451 22-311 (313)
51 3zgw_A Maternal embryonic leuc 100.0 1.5E-43 5E-48 346.7 17.1 246 171-440 8-260 (347)
52 1qcf_A Haematopoetic cell kina 100.0 5.4E-44 1.8E-48 363.0 14.3 254 170-447 185-444 (454)
53 1rjb_A FL cytokine receptor; k 100.0 2.6E-43 9E-48 344.9 18.5 263 171-454 43-341 (344)
54 3t9t_A Tyrosine-protein kinase 100.0 2.8E-43 9.5E-48 332.0 18.0 253 173-448 8-265 (267)
55 3kex_A Receptor tyrosine-prote 100.0 2.1E-43 7.3E-48 343.1 17.4 256 173-450 13-279 (325)
56 1tki_A Titin; serine kinase, m 100.0 5.2E-43 1.8E-47 339.7 19.7 247 172-440 4-257 (321)
57 3qup_A Tyrosine-protein kinase 100.0 3.7E-43 1.3E-47 340.8 18.7 257 171-448 21-299 (323)
58 2izr_A Casein kinase I isoform 100.0 6E-43 2.1E-47 340.6 20.0 259 173-449 9-283 (330)
59 2pvf_A Fibroblast growth facto 100.0 7.2E-43 2.5E-47 340.6 20.3 258 172-450 34-321 (334)
60 4f0f_A Serine/threonine-protei 100.0 4.3E-43 1.5E-47 334.6 17.7 248 173-445 19-287 (287)
61 4aw2_A Serine/threonine-protei 100.0 1.1E-43 3.8E-48 357.5 13.7 258 165-440 66-338 (437)
62 1csn_A Casein kinase-1; phosph 100.0 1.3E-42 4.5E-47 332.8 20.5 262 172-450 9-286 (298)
63 3tki_A Serine/threonine-protei 100.0 3.8E-43 1.3E-47 341.0 17.0 247 172-440 6-261 (323)
64 2yab_A Death-associated protei 100.0 1.5E-42 5.1E-47 341.5 21.3 247 172-440 11-272 (361)
65 2w1i_A JAK2; chromosomal rearr 100.0 2.8E-43 9.5E-48 342.4 15.7 268 173-450 41-325 (326)
66 3lxl_A Tyrosine-protein kinase 100.0 1.2E-43 4.2E-48 345.0 13.1 270 173-451 23-307 (327)
67 1o6l_A RAC-beta serine/threoni 100.0 1.4E-42 4.8E-47 338.6 20.7 244 172-440 4-260 (337)
68 1opk_A P150, C-ABL, proto-onco 100.0 5.3E-43 1.8E-47 359.3 18.2 251 172-445 219-476 (495)
69 3og7_A AKAP9-BRAF fusion prote 100.0 2.9E-43 9.9E-48 336.3 15.1 256 172-447 23-288 (289)
70 1u59_A Tyrosine-protein kinase 100.0 2.2E-42 7.6E-47 329.8 21.1 259 173-453 9-278 (287)
71 3lzb_A Epidermal growth factor 100.0 8.1E-43 2.8E-47 339.3 18.3 256 173-450 15-281 (327)
72 2y0a_A Death-associated protei 100.0 2.4E-42 8.3E-47 335.8 21.6 247 172-440 10-271 (326)
73 4e5w_A Tyrosine-protein kinase 100.0 3.4E-43 1.2E-47 337.6 14.9 264 173-446 21-301 (302)
74 3mdy_A Bone morphogenetic prot 100.0 7.1E-42 2.4E-46 333.5 24.4 270 166-449 30-333 (337)
75 3kmu_A ILK, integrin-linked ki 100.0 3.2E-43 1.1E-47 332.1 14.2 247 173-447 10-270 (271)
76 3p1a_A MYT1 kinase, membrane-a 100.0 4.1E-43 1.4E-47 339.0 15.1 242 172-440 56-304 (311)
77 1ob3_A PFPK5, cell division co 100.0 5.6E-43 1.9E-47 334.2 15.6 261 173-440 2-280 (288)
78 3brb_A Proto-oncogene tyrosine 100.0 2.4E-42 8.1E-47 333.7 20.1 261 169-450 30-311 (313)
79 2x4f_A Myosin light chain kina 100.0 1.6E-42 5.4E-47 343.2 19.2 243 177-440 93-342 (373)
80 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-42 3.7E-47 337.0 17.7 264 175-452 33-315 (318)
81 3f66_A Hepatocyte growth facto 100.0 2.1E-42 7.1E-47 331.6 19.5 258 173-451 25-295 (298)
82 2zv2_A Calcium/calmodulin-depe 100.0 4E-43 1.4E-47 336.7 14.5 245 172-440 12-292 (298)
83 1kob_A Twitchin; kinase, intra 100.0 1.8E-42 6E-47 344.0 19.6 248 172-440 50-304 (387)
84 3dtc_A Mitogen-activated prote 100.0 4.8E-43 1.6E-47 331.3 14.8 249 173-445 7-271 (271)
85 3cc6_A Protein tyrosine kinase 100.0 3.2E-42 1.1E-46 327.5 20.5 255 172-449 11-275 (281)
86 3c1x_A Hepatocyte growth facto 100.0 7.5E-43 2.6E-47 345.4 16.7 258 174-452 90-360 (373)
87 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.8E-43 9.6E-48 357.4 14.0 252 171-446 182-439 (452)
88 2i1m_A Macrophage colony-stimu 100.0 1.5E-42 5.1E-47 338.1 18.3 262 170-452 43-331 (333)
89 4fr4_A YANK1, serine/threonine 100.0 1.5E-42 5.3E-47 343.6 18.6 244 173-439 15-270 (384)
90 4euu_A Serine/threonine-protei 100.0 3.6E-42 1.2E-46 333.4 20.6 266 173-445 9-307 (319)
91 1p4o_A Insulin-like growth fac 100.0 2.4E-43 8.2E-48 341.9 12.2 266 166-452 18-304 (322)
92 3soa_A Calcium/calmodulin-depe 100.0 4.4E-42 1.5E-46 346.9 21.8 250 170-440 8-267 (444)
93 2bdw_A Hypothetical protein K1 100.0 3.1E-42 1.1E-46 339.8 20.2 249 171-441 27-285 (362)
94 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-42 3.8E-47 341.4 16.8 239 172-435 22-269 (353)
95 1mqb_A Ephrin type-A receptor 100.0 2.6E-42 8.9E-47 336.6 19.2 257 173-450 44-312 (333)
96 3g2f_A Bone morphogenetic prot 100.0 5.4E-43 1.8E-47 341.5 14.3 273 172-454 12-325 (336)
97 2xir_A Vascular endothelial gr 100.0 2E-42 6.7E-47 334.4 18.1 266 164-450 18-313 (316)
98 2vd5_A DMPK protein; serine/th 100.0 4.9E-43 1.7E-47 350.3 13.7 257 165-440 53-327 (412)
99 2pmi_A Negative RE, cyclin-dep 100.0 4E-42 1.4E-46 333.0 19.5 262 172-440 4-293 (317)
100 2eva_A TAK1 kinase - TAB1 chim 100.0 1.5E-42 5.1E-47 334.4 16.4 252 173-450 8-266 (307)
101 3kfa_A Tyrosine-protein kinase 100.0 4.2E-42 1.4E-46 327.7 19.3 256 171-449 11-273 (288)
102 3v8s_A RHO-associated protein 100.0 3.6E-43 1.2E-47 351.1 12.0 254 166-440 62-329 (410)
103 3c0i_A Peripheral plasma membr 100.0 3.8E-42 1.3E-46 337.8 19.1 248 172-440 23-286 (351)
104 3qd2_B Eukaryotic translation 100.0 6.2E-42 2.1E-46 332.9 20.2 247 171-440 4-325 (332)
105 3pls_A Macrophage-stimulating 100.0 4.7E-42 1.6E-46 328.9 18.9 257 174-451 22-291 (298)
106 2ozo_A Tyrosine-protein kinase 100.0 4.2E-42 1.4E-46 360.9 20.0 250 180-451 343-602 (613)
107 1fot_A TPK1 delta, CAMP-depend 100.0 9E-42 3.1E-46 330.4 20.5 241 172-440 5-258 (318)
108 4fvq_A Tyrosine-protein kinase 100.0 1.8E-42 6.2E-47 330.4 15.3 246 173-447 8-275 (289)
109 3f3z_A Calcium/calmodulin-depe 100.0 1E-41 3.5E-46 323.3 20.4 248 171-440 7-261 (277)
110 1qpc_A LCK kinase; alpha beta 100.0 3.8E-42 1.3E-46 326.6 17.4 256 172-451 12-273 (279)
111 2yfx_A Tyrosine-protein kinase 100.0 3.7E-42 1.3E-46 334.5 17.7 257 172-449 29-306 (327)
112 1b6c_B TGF-B superfamily recep 100.0 2.8E-41 9.6E-46 330.1 23.8 273 164-450 33-339 (342)
113 3llt_A Serine/threonine kinase 100.0 2.2E-42 7.4E-47 340.7 15.8 269 161-440 23-355 (360)
114 4dc2_A Protein kinase C IOTA t 100.0 5.9E-42 2E-46 340.6 18.5 247 172-435 51-307 (396)
115 3o0g_A Cell division protein k 100.0 7.4E-42 2.5E-46 327.0 18.6 261 173-440 2-282 (292)
116 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-42 4.3E-47 338.7 13.4 241 173-440 9-258 (336)
117 3gxj_A TGF-beta receptor type- 100.0 1.2E-43 4.2E-48 340.6 6.2 265 173-449 3-299 (303)
118 1u5q_A Serine/threonine protei 100.0 4.5E-42 1.6E-46 336.7 17.2 242 173-441 54-306 (348)
119 4hgt_A Casein kinase I isoform 100.0 8.9E-42 3E-46 326.5 18.6 264 171-451 7-284 (296)
120 1xjd_A Protein kinase C, theta 100.0 3.3E-42 1.1E-46 337.0 15.9 246 169-439 13-268 (345)
121 3uzp_A CKI-delta, CKID, casein 100.0 2.1E-41 7.1E-46 324.1 21.1 262 172-450 8-283 (296)
122 2zmd_A Dual specificity protei 100.0 7.1E-42 2.4E-46 340.6 18.5 247 173-441 56-321 (390)
123 3gni_B Strad alpha; kinase fol 100.0 9.9E-42 3.4E-46 339.6 19.5 265 172-440 24-333 (389)
124 3dbq_A Dual specificity protei 100.0 8.2E-42 2.8E-46 334.4 18.5 248 172-441 8-274 (343)
125 1xbb_A Tyrosine-protein kinase 100.0 6.6E-42 2.3E-46 327.2 17.2 257 172-451 15-283 (291)
126 3a8x_A Protein kinase C IOTA t 100.0 1.5E-41 5.2E-46 332.6 19.9 246 173-435 9-264 (345)
127 2wqm_A Serine/threonine-protei 100.0 2.3E-41 7.7E-46 326.4 20.8 260 172-451 31-301 (310)
128 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-42 3.7E-47 360.1 12.4 252 171-446 265-522 (535)
129 1byg_A CSK, protein (C-termina 100.0 5.6E-42 1.9E-46 325.4 16.0 248 172-448 20-274 (278)
130 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.2E-41 4E-46 333.9 18.8 240 173-440 41-293 (350)
131 2w4o_A Calcium/calmodulin-depe 100.0 1E-41 3.4E-46 334.5 18.3 247 171-440 51-305 (349)
132 2ac3_A MAP kinase-interacting 100.0 8.7E-42 3E-46 330.1 17.3 260 173-440 12-295 (316)
133 2y7j_A Phosphorylase B kinase 100.0 3.1E-41 1.1E-45 333.1 21.6 253 166-440 87-359 (365)
134 3hko_A Calcium/calmodulin-depe 100.0 7.3E-42 2.5E-46 334.7 17.0 255 168-440 21-330 (345)
135 2a2a_A Death-associated protei 100.0 3E-41 1E-45 327.3 21.1 247 172-440 11-272 (321)
136 2jii_A Serine/threonine-protei 100.0 2.1E-42 7.2E-47 339.8 13.1 259 173-450 42-339 (352)
137 3ork_A Serine/threonine protei 100.0 3.2E-42 1.1E-46 332.6 14.2 255 172-445 11-279 (311)
138 2v62_A Serine/threonine-protei 100.0 2.2E-42 7.6E-47 338.8 13.0 260 173-446 37-327 (345)
139 3a62_A Ribosomal protein S6 ki 100.0 1.3E-41 4.5E-46 330.8 18.2 244 172-440 16-276 (327)
140 3is5_A Calcium-dependent prote 100.0 1.3E-41 4.3E-46 324.3 17.7 246 173-440 22-278 (285)
141 2y94_A 5'-AMP-activated protei 100.0 1.9E-41 6.5E-46 344.6 20.0 242 173-440 16-266 (476)
142 3oz6_A Mitogen-activated prote 100.0 1.1E-41 3.7E-46 339.2 17.8 264 170-440 6-328 (388)
143 3g33_A Cell division protein k 100.0 1.9E-41 6.5E-46 326.6 18.8 262 171-440 7-296 (308)
144 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.1E-41 7.2E-46 334.4 19.5 250 171-449 63-341 (365)
145 3mtl_A Cell division protein k 100.0 2.2E-42 7.6E-47 335.8 12.2 261 173-440 2-281 (324)
146 3cok_A Serine/threonine-protei 100.0 1.4E-41 4.7E-46 322.6 17.4 245 172-440 10-262 (278)
147 3uc3_A Serine/threonine-protei 100.0 1.3E-41 4.5E-46 335.2 17.8 248 172-441 19-275 (361)
148 2buj_A Serine/threonine-protei 100.0 1.4E-41 4.6E-46 328.9 17.6 255 172-447 28-306 (317)
149 2eue_A Carbon catabolite derep 100.0 1.6E-41 5.3E-46 321.8 17.6 241 173-440 13-262 (275)
150 4agu_A Cyclin-dependent kinase 100.0 1.5E-41 5.1E-46 327.7 17.8 261 173-440 3-284 (311)
151 3fdn_A Serine/threonine-protei 100.0 2.2E-41 7.7E-46 321.4 18.5 244 171-441 7-258 (279)
152 3kk8_A Calcium/calmodulin depe 100.0 4E-41 1.4E-45 320.3 20.1 247 172-440 5-261 (284)
153 4ejn_A RAC-alpha serine/threon 100.0 7.1E-42 2.4E-46 346.7 15.7 244 172-440 147-404 (446)
154 4fl3_A Tyrosine-protein kinase 100.0 2.3E-41 7.7E-46 356.3 19.9 248 179-449 375-633 (635)
155 2i0e_A Protein kinase C-beta I 100.0 1.8E-41 6.1E-46 332.8 17.8 239 172-435 19-266 (353)
156 2j7t_A Serine/threonine-protei 100.0 6E-42 2.1E-46 328.9 14.1 248 172-440 18-275 (302)
157 3ll6_A Cyclin G-associated kin 100.0 1.1E-41 3.7E-46 331.9 16.1 253 172-449 27-310 (337)
158 3kn6_A Ribosomal protein S6 ki 100.0 2.4E-41 8.2E-46 328.6 18.3 241 178-439 16-269 (325)
159 2h34_A Serine/threonine-protei 100.0 2E-41 6.9E-46 326.8 17.7 257 172-449 33-298 (309)
160 4eut_A Serine/threonine-protei 100.0 8.2E-42 2.8E-46 341.0 15.3 269 173-448 9-310 (396)
161 2yex_A Serine/threonine-protei 100.0 3.4E-41 1.1E-45 319.4 18.7 248 171-440 5-261 (276)
162 3bhy_A Death-associated protei 100.0 6E-41 2E-45 318.9 20.5 254 172-447 4-274 (283)
163 1u46_A ACK-1, activated CDC42 100.0 5.8E-42 2E-46 327.1 13.5 255 173-448 18-285 (291)
164 3dls_A PAS domain-containing s 100.0 1.8E-41 6.2E-46 330.8 17.1 240 170-441 21-275 (335)
165 1fvr_A Tyrosine-protein kinase 100.0 2.3E-41 7.8E-46 329.0 17.5 253 173-449 25-302 (327)
166 2vwi_A Serine/threonine-protei 100.0 1E-41 3.6E-46 327.1 14.6 257 171-440 13-287 (303)
167 3i6u_A CDS1, serine/threonine- 100.0 4.4E-41 1.5E-45 338.0 19.7 248 170-440 132-399 (419)
168 3byv_A Rhoptry kinase; malaria 100.0 3.4E-42 1.2E-46 341.6 11.2 247 172-451 72-372 (377)
169 2a19_B Interferon-induced, dou 100.0 2.9E-41 9.8E-46 321.0 17.1 250 170-452 8-279 (284)
170 1t4h_A Serine/threonine-protei 100.0 2.1E-40 7.3E-45 316.4 22.0 243 174-440 27-282 (290)
171 3sv0_A Casein kinase I-like; t 100.0 1.7E-40 5.8E-45 338.2 22.2 260 172-448 6-279 (483)
172 3a7i_A MST3 kinase, serine/thr 100.0 7.5E-41 2.6E-45 321.7 18.5 244 173-441 22-271 (303)
173 3mwu_A Calmodulin-domain prote 100.0 8.4E-41 2.9E-45 342.6 20.0 248 171-440 20-276 (486)
174 4aaa_A Cyclin-dependent kinase 100.0 2.2E-41 7.6E-46 329.6 15.0 261 173-440 25-306 (331)
175 2r5t_A Serine/threonine-protei 100.0 2.4E-41 8.3E-46 334.2 15.4 245 172-441 37-290 (373)
176 2jam_A Calcium/calmodulin-depe 100.0 7E-41 2.4E-45 322.1 18.0 246 172-440 8-261 (304)
177 1ua2_A CAK, cell division prot 100.0 2.1E-41 7.2E-46 331.9 14.6 265 169-440 6-291 (346)
178 1nxk_A MAP kinase-activated pr 100.0 2.5E-41 8.4E-46 337.7 14.9 243 173-441 61-322 (400)
179 2clq_A Mitogen-activated prote 100.0 6E-41 2.1E-45 320.7 17.0 246 174-440 23-278 (295)
180 2qr7_A Ribosomal protein S6 ki 100.0 3.4E-41 1.1E-45 329.7 15.5 248 171-440 20-277 (342)
181 3pg1_A Mitogen-activated prote 100.0 1E-40 3.5E-45 328.9 19.1 269 164-440 13-316 (362)
182 3nyv_A Calmodulin-domain prote 100.0 4.2E-41 1.4E-45 344.7 16.8 247 172-440 25-281 (484)
183 2wtk_C Serine/threonine-protei 100.0 1.5E-40 5.3E-45 319.6 19.8 247 172-441 4-264 (305)
184 3mi9_A Cell division protein k 100.0 9.6E-41 3.3E-45 327.8 18.7 264 172-440 16-311 (351)
185 3ttj_A Mitogen-activated prote 100.0 1.5E-40 5.2E-45 338.0 20.6 258 172-440 61-355 (464)
186 1cm8_A Phosphorylated MAP kina 100.0 8.5E-41 2.9E-45 330.2 18.0 257 172-440 24-307 (367)
187 3q5i_A Protein kinase; CDPK, m 100.0 1.5E-40 5E-45 342.3 20.4 248 171-440 34-301 (504)
188 3rp9_A Mitogen-activated prote 100.0 1.4E-40 4.7E-45 338.5 20.0 190 173-368 53-280 (458)
189 3lij_A Calcium/calmodulin depe 100.0 8.8E-41 3E-45 343.0 18.7 247 172-440 36-291 (494)
190 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.5E-41 1.9E-45 326.6 16.3 263 170-440 31-318 (329)
191 2h6d_A 5'-AMP-activated protei 100.0 1.1E-40 3.8E-45 315.9 17.6 242 173-440 11-261 (276)
192 2vgo_A Serine/threonine-protei 100.0 1.8E-40 6.2E-45 316.0 19.1 241 173-440 14-262 (284)
193 2rku_A Serine/threonine-protei 100.0 1.2E-40 4.3E-45 318.7 18.0 245 172-441 14-266 (294)
194 2acx_A G protein-coupled recep 100.0 7.1E-41 2.4E-45 345.4 17.3 248 172-440 183-444 (576)
195 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.1E-41 3.9E-46 329.6 10.7 256 172-450 32-305 (319)
196 2w5a_A Serine/threonine-protei 100.0 2.5E-41 8.7E-46 320.8 12.8 252 172-442 5-269 (279)
197 3com_A Serine/threonine-protei 100.0 1.4E-40 4.6E-45 321.4 17.8 247 171-440 27-278 (314)
198 3eqc_A Dual specificity mitoge 100.0 3.2E-41 1.1E-45 332.4 13.6 259 173-440 33-324 (360)
199 2owb_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45 324.7 17.9 244 172-440 40-291 (335)
200 2pml_X PFPK7, Ser/Thr protein 100.0 5.2E-41 1.8E-45 329.1 14.7 258 172-440 30-322 (348)
201 1phk_A Phosphorylase kinase; g 100.0 1.9E-40 6.4E-45 317.9 18.3 248 171-440 15-283 (298)
202 2j0j_A Focal adhesion kinase 1 100.0 1.7E-40 5.9E-45 350.8 19.8 255 172-449 389-653 (656)
203 1x8b_A WEE1HU, WEE1-like prote 100.0 2.1E-40 7.1E-45 315.4 18.4 240 171-440 9-279 (289)
204 3qyz_A Mitogen-activated prote 100.0 1.4E-40 4.7E-45 328.4 17.6 262 172-440 26-313 (364)
205 1vzo_A Ribosomal protein S6 ki 100.0 3.7E-41 1.3E-45 331.3 13.2 250 172-442 53-323 (355)
206 2i6l_A Mitogen-activated prote 100.0 1.3E-40 4.4E-45 321.9 16.6 261 173-440 11-305 (320)
207 3lm5_A Serine/threonine-protei 100.0 1.3E-40 4.5E-45 323.7 16.6 258 162-440 17-287 (327)
208 3n9x_A Phosphotransferase; mal 100.0 2.9E-40 9.8E-45 333.5 19.5 196 172-373 25-253 (432)
209 2xrw_A Mitogen-activated prote 100.0 5.9E-40 2E-44 324.7 20.8 257 173-440 25-318 (371)
210 2ycf_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44 319.7 18.7 247 171-440 8-274 (322)
211 2r3i_A Cell division protein k 100.0 2.2E-40 7.5E-45 317.6 16.7 261 173-440 3-283 (299)
212 3nsz_A CK II alpha, casein kin 100.0 9.6E-40 3.3E-44 317.7 21.4 254 173-440 36-319 (330)
213 3an0_A Dual specificity mitoge 100.0 1E-40 3.5E-45 326.0 14.5 247 172-440 50-310 (340)
214 3fme_A Dual specificity mitoge 100.0 9.2E-41 3.1E-45 318.7 13.8 246 172-440 6-266 (290)
215 3eb0_A Putative uncharacterize 100.0 1.9E-40 6.4E-45 329.7 16.5 267 169-447 3-330 (383)
216 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.2E-40 2.1E-44 337.4 20.7 242 173-435 185-438 (543)
217 2x7f_A TRAF2 and NCK-interacti 100.0 6.3E-41 2.2E-45 325.5 12.3 256 162-440 13-286 (326)
218 3q60_A ROP5B; pseudokinase, tr 100.0 4.3E-41 1.5E-45 332.9 10.9 262 173-453 62-367 (371)
219 1zy4_A Serine/threonine-protei 100.0 4.2E-40 1.4E-44 315.7 17.2 249 171-440 4-283 (303)
220 3kvw_A DYRK2, dual specificity 100.0 4.5E-40 1.5E-44 331.6 18.2 195 172-377 96-304 (429)
221 2fst_X Mitogen-activated prote 100.0 1.2E-40 4E-45 329.0 13.5 257 172-440 28-311 (367)
222 3pfq_A PKC-B, PKC-beta, protei 100.0 6.1E-40 2.1E-44 347.6 19.6 240 171-435 339-587 (674)
223 1z57_A Dual specificity protei 100.0 8.9E-40 3.1E-44 318.5 18.3 258 172-440 13-328 (339)
224 3cek_A Dual specificity protei 100.0 7.1E-40 2.4E-44 316.4 17.1 252 168-441 23-293 (313)
225 2wei_A Calmodulin-domain prote 100.0 1E-39 3.6E-44 311.3 17.8 249 170-440 19-276 (287)
226 1wak_A Serine/threonine-protei 100.0 9E-40 3.1E-44 325.7 17.9 258 172-440 36-391 (397)
227 2b9h_A MAP kinase FUS3, mitoge 100.0 5.7E-40 1.9E-44 322.3 15.9 261 172-440 10-305 (353)
228 1blx_A Cyclin-dependent kinase 100.0 8.8E-40 3E-44 317.3 16.5 263 170-440 8-296 (326)
229 4e7w_A Glycogen synthase kinas 100.0 1.2E-39 4.1E-44 325.0 17.3 257 173-440 40-321 (394)
230 4exu_A Mitogen-activated prote 100.0 1.3E-39 4.5E-44 322.2 17.2 256 172-440 41-323 (371)
231 1j1b_A Glycogen synthase kinas 100.0 1.1E-39 3.7E-44 328.0 16.3 255 173-440 54-336 (420)
232 2vx3_A Dual specificity tyrosi 100.0 5.7E-39 2E-43 318.9 20.6 200 170-378 51-264 (382)
233 3aln_A Dual specificity mitoge 100.0 2.3E-39 7.8E-44 314.8 16.6 248 173-440 22-285 (327)
234 3e3p_A Protein kinase, putativ 100.0 3.6E-39 1.2E-43 317.5 17.9 268 166-440 16-314 (360)
235 2eu9_A Dual specificity protei 100.0 4.6E-39 1.6E-43 315.6 18.2 258 172-440 18-333 (355)
236 3rgf_A Cyclin-dependent kinase 100.0 3E-39 1E-43 323.5 16.6 196 173-375 20-239 (405)
237 3coi_A Mitogen-activated prote 100.0 2.7E-39 9.1E-44 317.8 15.4 255 173-440 24-305 (353)
238 2dyl_A Dual specificity mitoge 100.0 1.5E-39 5E-44 314.5 13.1 248 172-440 24-283 (318)
239 3fhr_A MAP kinase-activated pr 100.0 3.8E-39 1.3E-43 314.6 15.9 247 172-440 27-287 (336)
240 2rio_A Serine/threonine-protei 100.0 3E-39 1E-43 326.2 15.4 245 175-440 17-295 (434)
241 3a99_A Proto-oncogene serine/t 100.0 3.1E-39 1.1E-43 313.0 13.2 237 171-440 41-293 (320)
242 2iwi_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 311.0 13.7 241 167-440 25-283 (312)
243 3p23_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43 323.9 14.1 245 173-440 24-283 (432)
244 1q8y_A SR protein kinase; tran 100.0 9.8E-39 3.4E-43 315.8 15.7 257 173-440 19-333 (373)
245 3uqc_A Probable conserved tran 100.0 1.2E-38 4E-43 304.0 14.7 232 173-449 31-267 (286)
246 3qa8_A MGC80376 protein; kinas 100.0 2.4E-38 8.2E-43 329.9 15.1 258 172-438 13-295 (676)
247 2pzi_A Probable serine/threoni 100.0 6.1E-38 2.1E-42 333.9 17.7 238 173-448 80-329 (681)
248 3m2w_A MAP kinase-activated pr 100.0 1.3E-37 4.6E-42 298.6 15.2 229 173-440 17-256 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.7E-38 5.7E-43 318.6 7.7 245 172-449 77-374 (413)
250 2vuw_A Serine/threonine-protei 100.0 3.8E-36 1.3E-40 293.2 11.5 240 172-439 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.6E-30 9E-35 268.3 7.1 182 180-371 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 1.9E-27 6.5E-32 245.5 9.9 182 176-373 339-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 1.2E-23 4E-28 199.5 10.1 140 168-324 85-242 (282)
254 1zth_A RIO1 serine protein kin 99.8 8.7E-20 3E-24 170.6 9.3 137 175-324 49-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.7 1E-17 3.5E-22 163.3 6.8 147 167-324 86-265 (397)
256 3rgz_A Protein brassinosteroid 99.6 5E-16 1.7E-20 167.4 7.1 102 2-106 651-752 (768)
257 3tm0_A Aminoglycoside 3'-phosp 99.4 1.9E-12 6.5E-17 120.8 12.1 149 168-323 9-213 (263)
258 1ogq_A PGIP-2, polygalacturona 99.4 4.8E-13 1.7E-17 128.4 6.8 93 2-95 216-308 (313)
259 1w8a_A SLIT protein; signaling 99.3 2E-12 6.7E-17 114.9 7.3 91 3-93 50-141 (192)
260 2wfh_A SLIT homolog 2 protein 99.3 4.4E-12 1.5E-16 112.7 8.2 92 2-93 49-141 (193)
261 2r9u_A Variable lymphocyte rec 99.3 9E-12 3.1E-16 108.7 8.9 87 7-94 33-121 (174)
262 3g39_A Variable lymphocyte rec 99.3 9.5E-12 3.2E-16 108.2 9.0 88 7-94 30-118 (170)
263 1nd4_A Aminoglycoside 3'-phosp 99.3 8.7E-12 3E-16 115.8 9.1 138 174-323 21-214 (264)
264 2v70_A SLIT-2, SLIT homolog 2 99.3 8.7E-12 3E-16 113.2 8.7 86 3-88 53-139 (220)
265 3rgz_A Protein brassinosteroid 99.3 4.5E-12 1.5E-16 136.5 7.9 89 2-90 627-716 (768)
266 2ifg_A High affinity nerve gro 99.2 1.3E-11 4.4E-16 120.0 8.3 91 3-93 27-118 (347)
267 2v9t_B SLIT homolog 2 protein 99.2 2.6E-11 8.8E-16 110.1 9.2 87 2-89 51-139 (220)
268 3oja_A Leucine-rich immune mol 99.2 5.4E-12 1.8E-16 128.6 4.8 30 213-242 323-352 (487)
269 3e6j_A Variable lymphocyte rec 99.2 4.7E-11 1.6E-15 109.0 9.8 88 4-92 85-173 (229)
270 2o6r_A Variable lymphocyte rec 99.2 5.5E-11 1.9E-15 103.9 9.7 88 4-91 49-137 (177)
271 4g8a_A TOLL-like receptor 4; l 99.1 9.1E-11 3.1E-15 123.0 8.9 92 2-93 489-582 (635)
272 3m19_A Variable lymphocyte rec 99.1 1.8E-10 6.3E-15 106.5 9.5 87 3-89 79-166 (251)
273 2o6s_A Variable lymphocyte rec 99.1 2.3E-10 7.9E-15 102.6 9.9 87 3-89 48-135 (208)
274 1w8a_A SLIT protein; signaling 99.1 5.6E-11 1.9E-15 105.4 4.7 72 2-73 73-144 (192)
275 3rfs_A Internalin B, repeat mo 99.1 3.1E-10 1.1E-14 106.4 9.9 87 3-89 105-192 (272)
276 2v70_A SLIT-2, SLIT homolog 2 99.1 2E-10 7E-15 104.1 8.3 92 2-93 76-168 (220)
277 3dxp_A Putative acyl-COA dehyd 99.1 2.4E-10 8.2E-15 111.6 9.3 142 178-323 43-248 (359)
278 1ogq_A PGIP-2, polygalacturona 99.1 5.6E-11 1.9E-15 113.9 4.6 89 2-90 71-161 (313)
279 2v9t_B SLIT homolog 2 protein 99.1 3.3E-10 1.1E-14 102.7 8.9 89 3-92 76-166 (220)
280 1dce_A Protein (RAB geranylger 99.0 2.1E-10 7E-15 118.8 7.7 86 2-90 458-545 (567)
281 2ell_A Acidic leucine-rich nuc 99.0 1.3E-10 4.4E-15 100.5 5.2 86 3-90 45-132 (168)
282 2je0_A Acidic leucine-rich nuc 99.0 1.8E-10 6.3E-15 97.4 5.7 82 6-89 16-99 (149)
283 1p9a_G Platelet glycoprotein I 99.0 5.5E-10 1.9E-14 105.7 9.5 88 3-90 96-184 (290)
284 3j0a_A TOLL-like receptor 5; m 99.0 2E-10 7E-15 124.9 7.0 87 3-93 476-562 (844)
285 2je0_A Acidic leucine-rich nuc 99.0 7E-11 2.4E-15 100.1 2.2 87 2-90 37-125 (149)
286 2ell_A Acidic leucine-rich nuc 99.0 3.7E-10 1.3E-14 97.6 6.9 84 5-90 22-107 (168)
287 4ezg_A Putative uncharacterize 99.0 2.2E-10 7.4E-15 101.9 5.4 87 3-89 84-170 (197)
288 3e6j_A Variable lymphocyte rec 99.0 6.7E-10 2.3E-14 101.3 8.7 82 7-89 40-123 (229)
289 3m19_A Variable lymphocyte rec 99.0 7.6E-10 2.6E-14 102.3 9.1 86 3-88 55-141 (251)
290 3v47_A TOLL-like receptor 5B a 99.0 5.1E-10 1.8E-14 112.7 8.5 90 3-92 319-409 (455)
291 4fcg_A Uncharacterized protein 99.0 4.8E-10 1.6E-14 108.1 7.9 88 2-90 201-289 (328)
292 2o6q_A Variable lymphocyte rec 99.0 9.5E-10 3.3E-14 102.9 9.7 86 3-88 105-191 (270)
293 3zyj_A Leucine-rich repeat-con 99.0 5.2E-10 1.8E-14 112.4 8.1 92 2-93 202-294 (440)
294 2wfh_A SLIT homolog 2 protein 99.0 7.1E-10 2.4E-14 98.3 8.0 84 7-91 31-115 (193)
295 3sg8_A APH(2'')-ID; antibiotic 99.0 2.4E-10 8.3E-15 108.9 4.8 186 178-372 25-287 (304)
296 3zyi_A Leucine-rich repeat-con 99.0 5.9E-10 2E-14 112.4 7.8 93 2-94 213-306 (452)
297 1ozn_A Reticulon 4 receptor; N 99.0 4.7E-10 1.6E-14 105.7 6.7 86 3-88 125-211 (285)
298 4fcg_A Uncharacterized protein 99.0 5.4E-10 1.9E-14 107.7 7.1 86 3-90 179-265 (328)
299 4b8c_D Glucose-repressible alc 99.0 5.9E-10 2E-14 118.9 7.8 85 3-89 243-327 (727)
300 2o6s_A Variable lymphocyte rec 99.0 1.5E-09 5.1E-14 97.2 9.2 84 6-89 27-111 (208)
301 3g39_A Variable lymphocyte rec 99.0 1.2E-09 4.1E-14 94.7 7.8 72 2-73 49-120 (170)
302 3vq2_A TLR4, TOLL-like recepto 99.0 6.8E-10 2.3E-14 116.1 7.3 70 3-72 444-514 (606)
303 2z66_A Variable lymphocyte rec 98.9 1.5E-09 5.1E-14 103.4 8.6 88 3-90 146-235 (306)
304 4ezg_A Putative uncharacterize 98.9 1.1E-09 3.6E-14 97.5 6.7 86 2-89 107-192 (197)
305 3rfs_A Internalin B, repeat mo 98.9 2.2E-09 7.6E-14 100.5 9.2 88 2-89 80-168 (272)
306 1a9n_A U2A', U2A'; complex (nu 98.9 1.7E-09 5.8E-14 94.3 6.7 79 8-89 43-124 (176)
307 2z63_A TOLL-like receptor 4, v 98.9 2.1E-09 7.1E-14 111.4 8.4 91 3-93 441-533 (570)
308 2r9u_A Variable lymphocyte rec 98.9 2.6E-09 8.9E-14 93.0 7.7 71 2-73 52-123 (174)
309 2o6r_A Variable lymphocyte rec 98.9 4E-09 1.4E-13 91.9 8.5 85 6-90 27-112 (177)
310 1p9a_G Platelet glycoprotein I 98.9 4.2E-09 1.4E-13 99.6 9.2 86 4-90 74-160 (290)
311 2xot_A Amphoterin-induced prot 98.9 2.3E-09 7.8E-14 104.8 7.4 86 5-90 62-148 (361)
312 4g8a_A TOLL-like receptor 4; l 98.9 2.4E-09 8.1E-14 112.2 7.7 88 2-89 71-159 (635)
313 1a9n_A U2A', U2A'; complex (nu 98.9 9.2E-10 3.1E-14 96.0 3.8 85 2-88 59-150 (176)
314 1dce_A Protein (RAB geranylger 98.9 2.2E-09 7.7E-14 111.0 6.8 71 2-74 481-552 (567)
315 4glp_A Monocyte differentiatio 98.9 2.5E-09 8.7E-14 102.1 6.7 83 4-89 194-283 (310)
316 3t6q_A CD180 antigen; protein- 98.8 1.4E-09 4.9E-14 113.6 4.9 89 3-92 472-561 (606)
317 2z66_A Variable lymphocyte rec 98.8 4.1E-09 1.4E-13 100.3 7.2 89 2-90 121-211 (306)
318 1wwl_A Monocyte differentiatio 98.8 3.7E-09 1.3E-13 101.0 6.9 84 5-89 93-184 (312)
319 4eco_A Uncharacterized protein 98.8 1.5E-09 5.2E-14 114.2 4.3 88 2-90 242-342 (636)
320 4eco_A Uncharacterized protein 98.8 5.4E-09 1.9E-13 110.0 8.4 84 5-90 486-578 (636)
321 2id5_A Lingo-1, leucine rich r 98.8 3.9E-09 1.3E-13 107.0 7.0 91 3-93 244-335 (477)
322 2z62_A TOLL-like receptor 4, v 98.8 6.6E-09 2.3E-13 97.3 8.0 86 3-88 48-134 (276)
323 2o6q_A Variable lymphocyte rec 98.8 1.1E-08 3.6E-13 95.7 9.3 87 3-89 81-168 (270)
324 3v47_A TOLL-like receptor 5B a 98.8 3.1E-09 1E-13 107.0 5.9 88 2-89 49-140 (455)
325 4ecn_A Leucine-rich repeat pro 98.8 2.4E-09 8E-14 115.8 5.1 89 2-90 443-560 (876)
326 1ozn_A Reticulon 4 receptor; N 98.8 1.1E-08 3.8E-13 96.2 9.1 89 2-90 51-141 (285)
327 2xot_A Amphoterin-induced prot 98.8 6E-09 2.1E-13 101.8 7.2 82 8-89 40-123 (361)
328 3a79_B TLR6, VLRB.59, TOLL-lik 98.8 9E-09 3.1E-13 106.6 8.9 90 3-92 399-511 (562)
329 1wwl_A Monocyte differentiatio 98.8 4.7E-09 1.6E-13 100.3 6.2 84 4-89 198-285 (312)
330 3oja_A Leucine-rich immune mol 98.8 3.4E-09 1.2E-13 107.8 5.5 86 2-89 139-225 (487)
331 1xku_A Decorin; proteoglycan, 98.8 9.4E-09 3.2E-13 98.9 8.3 83 7-89 192-274 (330)
332 3r70_A Aminoglycoside phosphot 98.8 4.7E-08 1.6E-12 93.7 13.0 137 174-323 38-237 (320)
333 2z80_A TOLL-like receptor 2, v 98.8 8E-09 2.7E-13 100.4 7.6 81 8-88 53-134 (353)
334 2ft3_A Biglycan; proteoglycan, 98.8 1.1E-08 3.9E-13 98.5 8.5 67 3-70 213-279 (332)
335 4b8c_D Glucose-repressible alc 98.8 9E-09 3.1E-13 109.7 8.3 88 2-91 219-306 (727)
336 4ecn_A Leucine-rich repeat pro 98.8 2.4E-09 8.1E-14 115.8 3.8 86 5-91 489-586 (876)
337 2z62_A TOLL-like receptor 4, v 98.8 1.1E-08 3.8E-13 95.7 7.9 88 2-89 71-160 (276)
338 2z7x_B TOLL-like receptor 1, v 98.8 1.3E-08 4.6E-13 104.2 9.0 89 3-92 370-482 (520)
339 3vq2_A TLR4, TOLL-like recepto 98.8 1.2E-08 4.2E-13 106.5 8.7 88 2-89 51-139 (606)
340 2z81_A CD282 antigen, TOLL-lik 98.8 7.8E-09 2.7E-13 106.6 7.0 88 2-89 45-134 (549)
341 3j0a_A TOLL-like receptor 5; m 98.7 9.6E-09 3.3E-13 111.7 7.8 87 2-88 68-158 (844)
342 3oja_B Anopheles plasmodium-re 98.7 1.5E-08 5.1E-13 105.8 8.9 86 4-89 72-158 (597)
343 3zyi_A Leucine-rich repeat-con 98.7 1.6E-08 5.4E-13 101.9 7.8 83 7-89 75-158 (452)
344 3o6n_A APL1; leucine-rich repe 98.7 2.3E-08 8E-13 98.5 8.9 87 3-89 65-152 (390)
345 3oja_B Anopheles plasmodium-re 98.7 1.3E-08 4.5E-13 106.2 7.3 87 2-89 94-182 (597)
346 3t6q_A CD180 antigen; protein- 98.7 1.5E-08 5.1E-13 105.8 7.6 89 2-90 52-141 (606)
347 2ifg_A High affinity nerve gro 98.7 1.5E-08 5.3E-13 98.1 6.8 69 2-71 51-119 (347)
348 2ft3_A Biglycan; proteoglycan, 98.7 2.5E-08 8.5E-13 96.1 8.0 81 7-89 54-134 (332)
349 2xwt_C Thyrotropin receptor; s 98.7 1.1E-08 3.9E-13 93.5 5.3 67 3-69 51-119 (239)
350 2id5_A Lingo-1, leucine rich r 98.7 2.2E-08 7.6E-13 101.4 7.7 86 2-88 51-138 (477)
351 1ziw_A TOLL-like receptor 3; i 98.7 1.4E-08 4.9E-13 107.5 6.3 92 3-95 532-626 (680)
352 3o53_A Protein LRIM1, AGAP0063 98.7 1.8E-08 6.2E-13 96.5 6.3 85 3-89 140-225 (317)
353 1ds9_A Outer arm dynein; leuci 98.7 5.2E-10 1.8E-14 99.6 -4.3 83 3-89 44-126 (198)
354 3zyj_A Leucine-rich repeat-con 98.7 2.8E-08 9.7E-13 99.6 7.8 81 8-88 65-146 (440)
355 3o6n_A APL1; leucine-rich repe 98.7 2.7E-08 9.2E-13 98.0 7.3 87 2-89 88-176 (390)
356 1xku_A Decorin; proteoglycan, 98.6 4E-08 1.4E-12 94.5 7.6 84 3-89 167-251 (330)
357 1h6t_A Internalin B; cell adhe 98.6 2.6E-08 9E-13 94.1 6.1 83 2-89 107-189 (291)
358 3a79_B TLR6, VLRB.59, TOLL-lik 98.6 2.2E-08 7.5E-13 103.7 6.1 81 7-89 52-132 (562)
359 4fmz_A Internalin; leucine ric 98.6 2.1E-08 7E-13 97.1 5.5 83 3-89 239-322 (347)
360 1xeu_A Internalin C; cellular 98.6 4.5E-08 1.5E-12 91.1 7.5 81 3-89 37-117 (263)
361 3d1u_A Putative fructosamine-3 98.6 1.8E-07 6.1E-12 88.2 11.7 140 177-322 19-215 (288)
362 2z7x_B TOLL-like receptor 1, v 98.6 2.7E-08 9.2E-13 101.9 6.2 86 4-89 321-410 (520)
363 2z63_A TOLL-like receptor 4, v 98.6 4.4E-08 1.5E-12 101.3 7.9 88 2-89 47-135 (570)
364 1h6t_A Internalin B; cell adhe 98.6 5.3E-08 1.8E-12 92.0 7.7 83 3-90 86-168 (291)
365 1m9s_A Internalin B; cell inva 98.6 3.8E-08 1.3E-12 102.5 7.2 83 2-89 104-186 (605)
366 2z81_A CD282 antigen, TOLL-lik 98.6 2.7E-08 9.3E-13 102.5 5.8 84 7-90 26-110 (549)
367 1h6u_A Internalin H; cell adhe 98.6 4.5E-08 1.5E-12 93.3 6.8 82 3-89 125-206 (308)
368 1h6u_A Internalin H; cell adhe 98.6 5.8E-08 2E-12 92.5 7.5 82 3-89 81-162 (308)
369 4glp_A Monocyte differentiatio 98.6 3.3E-08 1.1E-12 94.3 5.7 84 6-89 90-180 (310)
370 1xeu_A Internalin C; cellular 98.6 4.1E-08 1.4E-12 91.4 6.2 82 2-89 58-139 (263)
371 2xwt_C Thyrotropin receptor; s 98.6 3.5E-08 1.2E-12 90.3 5.0 87 2-90 75-168 (239)
372 3tdw_A Gentamicin resistance p 98.6 6.1E-07 2.1E-11 85.4 13.5 136 179-323 25-224 (306)
373 1m9s_A Internalin B; cell inva 98.6 8.4E-08 2.9E-12 99.9 8.0 82 3-89 83-164 (605)
374 2z80_A TOLL-like receptor 2, v 98.6 4.8E-08 1.6E-12 94.9 5.8 87 2-89 71-160 (353)
375 4gkh_A Aminoglycoside 3'-phosp 98.6 6.7E-07 2.3E-11 83.2 13.5 136 180-323 31-223 (272)
376 3rw6_A Nuclear RNA export fact 98.6 3.4E-08 1.2E-12 91.5 4.3 65 6-72 169-237 (267)
377 1ziw_A TOLL-like receptor 3; i 98.5 7.6E-08 2.6E-12 101.9 6.9 85 3-88 45-131 (680)
378 1o6v_A Internalin A; bacterial 98.5 1.5E-07 5.2E-12 95.0 7.3 64 3-70 283-346 (466)
379 3o53_A Protein LRIM1, AGAP0063 98.5 4.6E-08 1.6E-12 93.6 3.3 83 6-89 119-202 (317)
380 3bz5_A Internalin-J, INLJ; leu 98.5 2.6E-07 8.8E-12 93.1 8.2 60 5-69 40-99 (457)
381 1ds9_A Outer arm dynein; leuci 98.4 1.2E-08 4.1E-13 90.6 -2.1 84 4-89 15-104 (198)
382 4fmz_A Internalin; leucine ric 98.4 2.9E-07 1E-11 88.9 7.5 83 2-89 61-143 (347)
383 3ovc_A Hygromycin-B 4-O-kinase 98.4 8.5E-07 2.9E-11 86.4 10.2 142 177-324 45-244 (362)
384 3bz5_A Internalin-J, INLJ; leu 98.4 3.4E-07 1.1E-11 92.3 7.4 64 3-72 187-250 (457)
385 3cvr_A Invasion plasmid antige 98.4 4E-07 1.4E-11 93.9 7.9 55 7-69 100-154 (571)
386 1o6v_A Internalin A; bacterial 98.4 3.2E-07 1.1E-11 92.6 6.9 83 2-89 63-145 (466)
387 3cvr_A Invasion plasmid antige 98.4 3.4E-07 1.2E-11 94.4 6.6 75 5-90 138-219 (571)
388 3ats_A Putative uncharacterize 98.3 6.3E-07 2.2E-11 87.0 7.4 79 179-257 26-121 (357)
389 2ca6_A RAN GTPase-activating p 98.3 4.6E-08 1.6E-12 96.3 -1.8 86 4-89 184-285 (386)
390 1jl5_A Outer protein YOPM; leu 98.3 1.3E-06 4.4E-11 87.9 8.7 75 7-88 131-205 (454)
391 1jl5_A Outer protein YOPM; leu 98.3 1.4E-06 4.7E-11 87.7 8.6 74 7-89 111-184 (454)
392 2ast_B S-phase kinase-associat 98.3 6.1E-08 2.1E-12 93.3 -1.3 81 7-88 70-152 (336)
393 3rw6_A Nuclear RNA export fact 98.2 1.6E-07 5.4E-12 87.0 -0.1 84 5-89 139-231 (267)
394 3g06_A SSPH2 (leucine-rich rep 98.2 1.8E-06 6.2E-11 90.0 7.5 52 31-89 221-272 (622)
395 2ca6_A RAN GTPase-activating p 98.2 1.4E-07 4.9E-12 92.7 -1.1 83 7-89 159-255 (386)
396 2ast_B S-phase kinase-associat 98.2 1.2E-07 4.2E-12 91.1 -1.9 86 3-88 89-178 (336)
397 3g06_A SSPH2 (leucine-rich rep 98.1 1.5E-06 5.3E-11 90.6 5.2 77 6-90 220-296 (622)
398 4ay9_X Follicle-stimulating ho 98.1 3E-06 1E-10 82.0 5.9 83 7-90 30-116 (350)
399 2q83_A YTAA protein; 2635576, 98.1 2.6E-05 9E-10 74.8 12.5 140 179-323 38-252 (346)
400 3goz_A Leucine-rich repeat-con 98.1 8.7E-07 3E-11 86.3 2.0 84 6-89 21-120 (362)
401 3f7w_A Putative fructosamine-3 98.1 1.7E-05 5.7E-10 74.5 10.8 79 174-256 16-97 (288)
402 2olc_A MTR kinase, methylthior 98.1 2E-05 6.7E-10 77.6 11.4 75 178-254 35-120 (397)
403 4ay9_X Follicle-stimulating ho 98.1 2.5E-06 8.7E-11 82.6 4.8 58 11-72 13-71 (350)
404 3goz_A Leucine-rich repeat-con 98.0 8.2E-07 2.8E-11 86.5 -0.2 87 3-89 46-149 (362)
405 3jr1_A Putative fructosamine-3 98.0 5.8E-05 2E-09 71.6 12.3 137 178-319 41-232 (312)
406 2pyw_A Uncharacterized protein 97.7 0.00017 5.8E-09 71.5 11.5 75 292-368 231-312 (420)
407 1z7x_W Ribonuclease inhibitor; 97.5 5.6E-06 1.9E-10 83.1 -2.4 86 4-89 281-381 (461)
408 1z7x_W Ribonuclease inhibitor; 97.5 9.2E-06 3.1E-10 81.5 -1.2 84 6-89 312-409 (461)
409 2ppq_A HSK, HK, homoserine kin 97.5 0.00059 2E-08 64.7 11.5 159 162-323 6-217 (322)
410 3csv_A Aminoglycoside phosphot 97.5 0.001 3.5E-08 63.5 12.7 141 179-324 24-218 (333)
411 3dxq_A Choline/ethanolamine ki 97.5 0.00047 1.6E-08 64.9 10.1 137 178-323 23-202 (301)
412 1zyl_A Hypothetical protein YI 97.4 0.0015 5E-08 62.2 13.3 159 161-323 9-223 (328)
413 3un9_A NLR family member X1; l 97.4 2.2E-05 7.7E-10 76.6 0.4 85 5-89 153-250 (372)
414 1nw1_A Choline kinase (49.2 KD 97.3 0.0004 1.4E-08 69.0 8.0 71 179-255 79-158 (429)
415 3ogk_B Coronatine-insensitive 97.3 4.5E-05 1.5E-09 79.0 0.6 85 5-89 434-524 (592)
416 3rfe_A Platelet glycoprotein I 97.3 0.00049 1.7E-08 56.2 6.6 56 10-68 11-68 (130)
417 3feg_A Choline/ethanolamine ki 97.2 0.002 6.7E-08 62.7 11.4 140 179-323 56-254 (379)
418 3un9_A NLR family member X1; l 97.2 6.9E-05 2.4E-09 73.1 0.3 84 6-89 125-222 (372)
419 3ogk_B Coronatine-insensitive 97.1 3.1E-05 1.1E-09 80.2 -2.5 81 5-85 162-250 (592)
420 2ra8_A Uncharacterized protein 97.0 9.2E-05 3.1E-09 71.8 -0.0 85 5-89 217-318 (362)
421 3c5i_A Choline kinase; choline 97.0 0.00088 3E-08 65.0 6.8 72 179-255 39-120 (369)
422 1io0_A Tropomodulin; LRR prote 97.0 0.00016 5.5E-09 63.0 1.0 67 3-69 32-107 (185)
423 1io0_A Tropomodulin; LRR prote 97.0 0.00014 4.9E-09 63.3 0.7 67 3-69 61-137 (185)
424 2qg7_A Ethanolamine kinase PV0 97.0 0.0016 5.4E-08 65.1 8.3 73 179-256 114-188 (458)
425 2p1m_B Transport inhibitor res 96.8 7.7E-05 2.6E-09 77.2 -3.3 41 27-68 428-469 (594)
426 2yle_A Protein spire homolog 1 96.7 0.012 4.2E-07 51.8 10.9 100 254-371 33-135 (229)
427 3i1a_A Spectinomycin phosphotr 96.7 0.0095 3.3E-07 57.0 10.8 32 292-323 205-236 (339)
428 3sb4_A Hypothetical leucine ri 96.5 0.0026 8.8E-08 60.6 5.4 79 6-88 225-307 (329)
429 3f2s_A CK, chetk-alpha, cholin 96.4 0.0053 1.8E-07 60.0 7.4 141 179-323 58-280 (401)
430 2p1m_B Transport inhibitor res 96.3 0.00044 1.5E-08 71.4 -1.0 84 5-88 103-194 (594)
431 3sb4_A Hypothetical leucine ri 96.3 0.0042 1.4E-07 59.1 5.7 64 3-70 246-312 (329)
432 3mes_A Choline kinase; malaria 96.1 0.0066 2.2E-07 59.9 6.0 73 179-256 76-157 (424)
433 3rfe_A Platelet glycoprotein I 95.8 0.0067 2.3E-07 49.3 4.0 36 8-44 32-68 (130)
434 2ra8_A Uncharacterized protein 95.5 0.0024 8E-08 61.8 0.0 84 6-89 192-290 (362)
435 4fdw_A Leucine rich hypothetic 94.5 0.043 1.5E-06 53.7 6.0 62 2-65 266-333 (401)
436 3e4g_A ATP synthase subunit S, 94.0 0.007 2.4E-07 51.8 -0.8 81 8-88 62-149 (176)
437 3e4g_A ATP synthase subunit S, 93.7 0.014 4.6E-07 50.0 0.4 47 22-68 52-99 (176)
438 1pgv_A TMD-1, tropomodulin TMD 93.5 0.023 7.7E-07 49.6 1.5 65 5-69 39-112 (197)
439 4fdw_A Leucine rich hypothetic 93.3 0.081 2.8E-06 51.7 5.2 59 3-65 154-213 (401)
440 3g15_A CK, chetk-alpha, cholin 93.1 0.054 1.9E-06 52.9 3.6 30 294-323 245-280 (401)
441 2l2t_A Receptor tyrosine-prote 91.3 0.24 8.4E-06 31.2 3.8 27 120-146 15-41 (44)
442 2ks1_B Epidermal growth factor 90.8 0.22 7.5E-06 31.5 3.2 20 123-142 19-38 (44)
443 4fs7_A Uncharacterized protein 89.9 0.3 1E-05 47.4 5.0 59 3-65 293-353 (394)
444 2jwa_A Receptor tyrosine-prote 89.9 0.53 1.8E-05 29.6 4.3 21 125-145 21-41 (44)
445 4h09_A Hypothetical leucine ri 89.6 0.29 1E-05 47.0 4.7 60 3-65 259-320 (379)
446 1pgv_A TMD-1, tropomodulin TMD 89.3 0.065 2.2E-06 46.7 -0.2 61 5-65 68-136 (197)
447 4gt6_A Cell surface protein; l 89.0 0.51 1.8E-05 45.6 6.0 82 2-89 283-368 (394)
448 4ann_A ESSB; membrane protein, 87.6 1.3 4.5E-05 38.8 7.0 117 227-374 43-159 (215)
449 4ano_A ESSB; membrane protein, 85.5 2.4 8.3E-05 37.2 7.6 115 227-373 48-163 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 85.0 0.12 4.2E-06 51.5 -1.1 59 178-239 147-214 (463)
451 4gt6_A Cell surface protein; l 82.7 2.1 7.2E-05 41.2 6.7 61 2-65 260-321 (394)
452 4h09_A Hypothetical leucine ri 82.3 1.4 4.7E-05 42.2 5.2 63 3-69 236-300 (379)
453 4fs7_A Uncharacterized protein 80.5 1.6 5.5E-05 42.1 4.9 58 3-65 272-330 (394)
454 2k1k_A Ephrin type-A receptor 77.2 2.7 9.3E-05 25.5 3.4 15 119-133 15-29 (38)
455 2ks1_B Epidermal growth factor 70.4 5.3 0.00018 25.1 3.6 30 120-149 13-42 (44)
456 2jwa_A Receptor tyrosine-prote 69.3 3.9 0.00013 25.7 2.8 30 120-149 13-42 (44)
457 2l2t_A Receptor tyrosine-prote 65.4 8.2 0.00028 24.2 3.7 30 120-149 12-41 (44)
458 2klu_A T-cell surface glycopro 49.6 22 0.00076 24.2 3.9 27 121-147 13-40 (70)
459 2l8s_A Integrin alpha-1; trans 44.6 34 0.0012 22.4 4.1 21 120-140 12-32 (54)
460 1cja_A Protein (actin-fragmin 44.4 1.5E+02 0.005 27.7 10.0 77 243-323 156-237 (342)
461 2knc_A Integrin alpha-IIB; tra 35.4 54 0.0019 21.5 4.0 20 120-139 15-34 (54)
462 3ls8_A Phosphatidylinositol 3- 29.3 4.6E+02 0.016 26.6 11.7 46 269-322 454-501 (614)
463 2knc_A Integrin alpha-IIB; tra 25.0 1.4E+02 0.0049 19.4 4.7 23 115-137 13-35 (54)
464 2lz0_A Uncharacterized protein 24.8 64 0.0022 24.0 3.5 39 25-65 14-53 (100)
465 2k1a_A Integrin alpha-IIB; sin 23.0 1.3E+02 0.0045 18.5 4.0 21 120-140 13-33 (42)
466 3pk1_B Apoptosis regulator BAX 22.1 1E+02 0.0036 17.8 3.1 21 433-453 7-27 (34)
467 2l9u_A Receptor tyrosine-prote 22.1 1.1E+02 0.0037 17.8 3.2 13 130-142 21-33 (40)
468 2l34_A TYRO protein tyrosine k 21.2 98 0.0033 17.9 3.0 10 120-129 12-21 (33)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.3e-58 Score=438.77 Aligned_cols=255 Identities=27% Similarity=0.435 Sum_probs=211.6
Q ss_pred hcCCcCCccCCCCceEEEEEEeC------CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS------DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
++|...+.||+|+||+||+|++. ++..||||+++.......++|.+|++++++++|||||+++|+|.+.+..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46777789999999999999864 478899999987766667889999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEE
Q 044428 247 VLEFMPNGSLEKWLYSHN------------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAH 314 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~k 314 (457)
|||||++|+|.++|+... ..++|.+++.++.|||.||+||| +++|+||||||+|||+++++++|
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA----SQHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCccCHhhEEECCCCcEE
Confidence 999999999999997642 46999999999999999999999 67799999999999999999999
Q ss_pred EeccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcC
Q 044428 315 VSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLP 389 (457)
Q Consensus 315 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~ 389 (457)
|+|||+|+.....+.........||+.||||| ..++.++|||||||++|||+| |+.||.......+...+....
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~- 247 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR- 247 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTC-
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-
Confidence 99999999775443333334467999999999 448999999999999999999 899997654333322222111
Q ss_pred chhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 390 HKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 390 ~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
.. ..+..|+.++.+++.+||+.||++||||.||++.|+++.+.
T Consensus 248 ----------~~------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 248 ----------VL------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ----------CC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------CC------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 00 01123466789999999999999999999999999988764
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.5e-57 Score=440.88 Aligned_cols=255 Identities=25% Similarity=0.424 Sum_probs=204.1
Q ss_pred hcCCcCCccCCCCceEEEEEEeC------CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS------DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45666779999999999999864 478999999987766667789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc
Q 044428 247 VLEFMPNGSLEKWLYSHN--------------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV 312 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~ 312 (457)
|||||++|+|.++++... ..++|.++++|+.|||.||+||| ..+|+||||||+|||++++++
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA----GLHFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEETTTE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecccccHhhEEECCCCc
Confidence 999999999999997642 35899999999999999999999 677999999999999999999
Q ss_pred EEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhh
Q 044428 313 AHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQS 387 (457)
Q Consensus 313 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~ 387 (457)
+||+|||+++.+...+.....+...||+.|||||. .++.++|||||||++|||+| |+.||.......+...+...
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g 276 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 276 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 99999999997755444444455789999999993 47889999999999999999 89999765433322222211
Q ss_pred cCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 388 LPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 388 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
. .. ..+..|+..+.+++.+||+.||++||||.||++.|+.+.+.
T Consensus 277 ~--------~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 277 R--------EL---------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp C--------CC---------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred C--------CC---------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1 00 01123466789999999999999999999999999998765
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-57 Score=433.98 Aligned_cols=256 Identities=28% Similarity=0.460 Sum_probs=202.6
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
+++...+.||+|+||+||+|++++ .||||+++.. .....+.|.+|++++++++|||||+++|+|.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 466777899999999999999753 5999998743 23456789999999999999999999999865 568999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 330 (457)
|++|+|.++|+..+..++|.+++.|+.|||.||+||| +.+||||||||+|||+++++++||+|||+|+........
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH----~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH----AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999999999887777999999999999999999999 678999999999999999999999999999977544333
Q ss_pred ceeccccccccccCCCCC-------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHH-HHHhhcCchhHHhccccccc
Q 044428 331 LIQTKTMATIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKH-WVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 331 ~~~~~~~gt~~y~aPE~~-------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~-~~~~~~~~~~~~~~d~~l~~ 402 (457)
.......||+.|||||.+ ++.++|||||||++|||+||+.||.......... .+.... ..+.+..
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~-------~~p~~~~ 261 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY-------ASPDLSK 261 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTC-------CCCCSTT
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCC-------CCCCccc
Confidence 334557899999999943 6789999999999999999999997644322111 111111 1111111
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
.+.+|+..+.+++.+||+.||++||||.||++.|+.++..
T Consensus 262 ------~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 262 ------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp ------SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred ------ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 1123466789999999999999999999999999887644
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.2e-57 Score=435.69 Aligned_cols=251 Identities=24% Similarity=0.413 Sum_probs=206.5
Q ss_pred cCCcCCccCCCCceEEEEEEeC------CCCEEEEEEecccch-hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 174 EFDECNLLGIGSFGSVYKGTLS------DGTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 174 ~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
++...+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+.+..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3445678999999999999863 568899999976543 345689999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC
Q 044428 247 VLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM 311 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~ 311 (457)
|||||++|+|.++|.... ..++|.++++|+.|||.||+||| +.+||||||||+|||+++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS----SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGG
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCCCCCCccccceEECCCC
Confidence 999999999999997532 35899999999999999999999 67799999999999999999
Q ss_pred cEEEeccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHh
Q 044428 312 VAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQ 386 (457)
Q Consensus 312 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~ 386 (457)
++||+|||+++.+...+.....+...||+.||||| ..++.++|||||||++|||+| |+.||.......+...+..
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~ 262 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 262 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 99999999999775443333445578999999999 458999999999999999999 8999976543333322221
Q ss_pred hcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 044428 387 SLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445 (457)
Q Consensus 387 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i 445 (457)
.. . ...+.+|+..+.+++.+||+.||++||||.||++.|+.+
T Consensus 263 ~~-----------~------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 263 RQ-----------V------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp TC-----------C------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CC-----------C------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 10 0 011224567799999999999999999999999999764
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.4e-55 Score=422.04 Aligned_cols=272 Identities=21% Similarity=0.312 Sum_probs=200.5
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCC----eeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD----FKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 248 (457)
++|...+.||+|+||+||+|++ +|+.||||+++..... ...+..|+..+.+++|||||+++|+|...+ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3566678999999999999998 5899999999755322 223345666777899999999999997654 579999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH----ALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
|||++|+|.++++... ++|..+.+++.|++.||+|||+.+ ..++|+||||||+|||++.++++||+|||+++..
T Consensus 81 Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999999998765 899999999999999999999542 1348999999999999999999999999999987
Q ss_pred CCCCCcc--eeccccccccccCCCCC----------CCCccchhhhhHHHHHHhcCCCCCCCCCCCc--HHHHHHhhcC-
Q 044428 325 GEGDDSL--IQTKTMATIGYMAPEGI----------VSTKCDVYSYGILLLETFSRKKPTNDLGEMS--LKHWVNQSLP- 389 (457)
Q Consensus 325 ~~~~~~~--~~~~~~gt~~y~aPE~~----------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~--l~~~~~~~~~- 389 (457)
....... ......||+.|+|||.+ ++.++|||||||++|||+||+.|+....... ...+......
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 5443321 12346799999999954 3568999999999999999988875422111 0000000000
Q ss_pred chhH-HhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 390 HKLA-EVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 390 ~~~~-~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
+.+. .+.+..+...........+++..+.+++.+||+.||++||||.||++.|+++.++
T Consensus 239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 0011 1111111111111112235677899999999999999999999999999998764
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.9e-53 Score=411.97 Aligned_cols=245 Identities=22% Similarity=0.319 Sum_probs=204.3
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEecc
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFM 251 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (457)
+.|+..+.||+|+||+||+|+.. +|+.||||++..........+.+|++++++++|||||++++++.+.+..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45888889999999999999975 79999999998665555667899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCcc
Q 044428 252 PNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331 (457)
Q Consensus 252 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 331 (457)
++|+|.+++.... +++.+...++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 154 ~gg~L~~~l~~~~--l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-- 225 (346)
T 4fih_A 154 EGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-- 225 (346)
T ss_dssp TTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--
T ss_pred CCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--
Confidence 9999999998754 899999999999999999999 67899999999999999999999999999998754322
Q ss_pred eeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccch
Q 044428 332 IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSF 407 (457)
Q Consensus 332 ~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 407 (457)
.....+||+.|||||.+ ++.++|||||||++|||++|+.||...........+....+ +.+.
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~--------~~~~------ 291 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP--------PRLK------ 291 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC--------CCCS------
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC--------CCCC------
Confidence 23457899999999943 78899999999999999999999976543332222222111 1111
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 408 SAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 408 ~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+..+...+.+++.+||+.||++|||+.|+++
T Consensus 292 -~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 292 -NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp -CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01122456889999999999999999999875
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.5e-53 Score=414.54 Aligned_cols=259 Identities=24% Similarity=0.372 Sum_probs=210.5
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEeC------CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCC-CccceeeeeeecC
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTLS------DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRH-RNLIKILSGCSNL 241 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~ 241 (457)
...++|+..+.||+|+||+||+|++. .++.||||++.... ....+.|.+|++++.+++| ||||+++|+|.+.
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 34578888999999999999999864 24679999997654 3345679999999999976 8999999999764
Q ss_pred -CeeEEEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCe
Q 044428 242 -DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNI 305 (457)
Q Consensus 242 -~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NI 305 (457)
+..++|||||++|+|.++|+... ..+++.+++.++.|||.||+||| +.+||||||||+||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH----~~~iiHRDLK~~NI 216 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNI 216 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh----hCCeecCccCccce
Confidence 57899999999999999997532 34899999999999999999999 67799999999999
Q ss_pred eecCCCcEEEeccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCC-c
Q 044428 306 LLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEM-S 379 (457)
Q Consensus 306 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~-~ 379 (457)
|+++++++||+|||+|+.+.........+...||+.||||| ..++.++|||||||++|||+| |+.||...... .
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~ 296 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 296 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999999876544444455678999999999 448999999999999999998 89999764322 1
Q ss_pred HHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 380 LKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 380 l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
+...+.... ... .+..++.++.+++.+||+.||++||||.||++.|+++.+.-
T Consensus 297 ~~~~i~~g~--------~~~---------~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 297 FCRRLKEGT--------RMR---------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp HHHHHHHTC--------CCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCC--------CCC---------CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 212111111 011 11123556899999999999999999999999999987653
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.7e-53 Score=410.62 Aligned_cols=245 Identities=21% Similarity=0.316 Sum_probs=195.8
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57899999999999999999874 79999999997542 3445679999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 250 FMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||++|+|.+++...+ ..+++.+...++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH----DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-
Confidence 999999999998654 45789999999999999999999 678999999999999999999999999999976421
Q ss_pred CcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
.......+||+.|||||.+ ++.++|||||||++|||+||+.||.......+...+.. .......
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~-----------~~~~~~~ 246 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS-----------GSFPPVS 246 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-----------TCCCCCC
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc-----------CCCCCCC
Confidence 1122346799999999943 67899999999999999999999976432222211111 1110000
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
..++..+.+++.+||+.||++|||+.|+++
T Consensus 247 ------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 ------LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112446889999999999999999999975
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=7.6e-53 Score=406.57 Aligned_cols=253 Identities=20% Similarity=0.217 Sum_probs=203.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
.+.|...++||+|+||.||+|+.. +|+.||||+++.... ..+|+.++++++|||||++++++.+.+..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 356777789999999999999975 799999999975422 24799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC-cEEEeccccccccCCCCC
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM-VAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg~~~~~~~~~~ 329 (457)
|++|+|.+++...+ .+++.....++.||+.||+||| ..+|+||||||+|||++.++ .+||+|||+|+.+.....
T Consensus 132 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH----TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 99999999998764 4899999999999999999999 78899999999999999987 699999999998754322
Q ss_pred cc---eeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccc
Q 044428 330 SL---IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 330 ~~---~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
.. .....+||+.|||||.+ ++.++|||||||++|||+||+.||.......+...+....+. +..
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~---------~~~ 277 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPP---------IRE 277 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCG---------GGG
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCC---------chh
Confidence 11 12335799999999943 788999999999999999999999875444333322221100 000
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
.+.+++..+.+++.+||+.||++|||+.|+++.|....++.
T Consensus 278 ------~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 278 ------IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp ------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ------cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 01123556889999999999999999999999988876653
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-52 Score=397.49 Aligned_cols=243 Identities=23% Similarity=0.351 Sum_probs=191.3
Q ss_pred CcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeec----CCeeEEEE
Q 044428 176 DECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSN----LDFKALVL 248 (457)
Q Consensus 176 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 248 (457)
...+.||+|+||+||+|+.. ++..||+|++.... ......|.+|++++++++|||||+++++|.+ .+..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 34457999999999999875 68999999997542 3345679999999999999999999998864 35689999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec-CCCcEEEeccccccccCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||++|+|.+++.+.. .+++.....++.||+.||+|||+.. ++|+||||||+|||++ .++.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~--~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRT--PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSS--SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 9999999999998754 5899999999999999999999321 2399999999999997 4899999999999864321
Q ss_pred CCcceeccccccccccCCCCC---CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 328 DDSLIQTKTMATIGYMAPEGI---VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~---~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
.....+||+.|||||.+ ++.++|||||||++|||+||+.||..... ........... ..+...
T Consensus 186 ----~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~--~~~~~~~i~~~-----~~~~~~--- 251 (290)
T 3fpq_A 186 ----FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSG-----VKPASF--- 251 (290)
T ss_dssp ----SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTT-----CCCGGG---
T ss_pred ----ccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--HHHHHHHHHcC-----CCCCCC---
Confidence 22346899999999944 78899999999999999999999965332 12211111100 000000
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
+..++.++.+++.+||+.||++|||+.|+++
T Consensus 252 -----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 252 -----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0111345789999999999999999999875
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1e-52 Score=401.04 Aligned_cols=244 Identities=23% Similarity=0.315 Sum_probs=203.0
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|+..+.||+|+||+||+|+.. +|+.||||++.+.. ......+.+|++++++++|||||++++++.+.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999874 79999999997542 334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++|+|.+++.+.+ .+++.....++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH----~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999998754 4899999999999999999999 6789999999999999999999999999999875544
Q ss_pred CcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
........+||+.|||||.+ ++.++||||+||++|||+||+.||.......+...+... +..+..
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~---------~~~~p~-- 255 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL---------EYDFPE-- 255 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT---------CCCCCT--
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC---------CCCCCc--
Confidence 33334557899999999943 788999999999999999999999764432222211110 000100
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAA 439 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~ 439 (457)
....++.+++.+|++.||++|||+.|+.
T Consensus 256 -------~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 256 -------KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -------TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -------ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1134578999999999999999999864
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.9e-52 Score=412.54 Aligned_cols=245 Identities=22% Similarity=0.320 Sum_probs=204.7
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEecc
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFM 251 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (457)
+.|+..+.||+|+||.||+|+.. +|+.||||++..........+.+|+.+|++++|||||++++++.+.+..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56889999999999999999975 79999999998665555667899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCcc
Q 044428 252 PNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331 (457)
Q Consensus 252 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 331 (457)
++|+|.+++.... +++.+...++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 231 ~gG~L~~~i~~~~--l~e~~~~~~~~qil~aL~ylH----~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-- 302 (423)
T 4fie_A 231 EGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-- 302 (423)
T ss_dssp TTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--
T ss_pred CCCcHHHHHhccC--CCHHHHHHHHHHHHHHHHHHH----HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--
Confidence 9999999998754 899999999999999999999 67899999999999999999999999999998754322
Q ss_pred eeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccch
Q 044428 332 IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSF 407 (457)
Q Consensus 332 ~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 407 (457)
.....+||+.|||||.+ ++.++|||||||++|||++|+.||...........+....+ +.+..
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~--------~~~~~----- 369 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP--------PRLKN----- 369 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC--------CCCSC-----
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC--------CCCcc-----
Confidence 23457899999999943 78899999999999999999999976543333222222111 11111
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 408 SAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 408 ~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
...+...+.+++.+||+.||++|||+.|+++
T Consensus 370 --~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 --LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp --TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0112445889999999999999999999875
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-51 Score=387.47 Aligned_cols=241 Identities=27% Similarity=0.397 Sum_probs=185.7
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++|||||++++++.+.+..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999874 79999999997542 233457899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+ +|+|.+++.+.. .+++.+...++.||+.||+||| +.+|+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH----~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 999 689999998765 4999999999999999999999 6789999999999999999999999999998764322
Q ss_pred CcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
......||+.|+|||.+ .+.++||||+||++|||+||+.||.......+...+.... ..+.
T Consensus 167 ---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~---------~~~p-- 232 (275)
T 3hyh_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV---------YTLP-- 232 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC---------CCCC--
T ss_pred ---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC---------CCCC--
Confidence 22346899999999943 3578999999999999999999997643222211111100 0000
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
...+..+.+++.+|++.||++|||+.|+++
T Consensus 233 -------~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 -------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -------CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 012345789999999999999999999876
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.8e-51 Score=392.27 Aligned_cols=238 Identities=26% Similarity=0.326 Sum_probs=188.4
Q ss_pred hcCCcCCccCCCCceEEEEEEeC----CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS----DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
++|+..+.||+|+||+||+|+.. +++.||||+++... ......+.+|++++++++|||||++++++.+.+..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999862 57899999997542 2233468899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++.+.. .+++.+...++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999998764 4899999999999999999999 67899999999999999999999999999987543
Q ss_pred CCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
... .....+||+.|||||.+ ++.++||||+||++|||+||+.||...+...+...+... ...
T Consensus 179 ~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~-----------~~~- 244 (304)
T 3ubd_A 179 HEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA-----------KLG- 244 (304)
T ss_dssp --C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------CCC-
T ss_pred CCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC-----------CCC-
Confidence 221 23347899999999933 788999999999999999999999764432222221111 100
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHT 435 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~ 435 (457)
.. ..++..+.+++.+||+.||++|||+
T Consensus 245 ~p------~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 245 MP------QFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CC------TTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred CC------CcCCHHHHHHHHHHcccCHHHCCCC
Confidence 00 1124458899999999999999995
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.3e-49 Score=380.62 Aligned_cols=246 Identities=24% Similarity=0.360 Sum_probs=183.2
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCC-------
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD------- 242 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 242 (457)
.++|+..+.||+|+||+||+|+.. +|+.||||+++... +.....+.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 357899999999999999999875 79999999997543 334467899999999999999999999886543
Q ss_pred -----eeEEEEeccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEE
Q 044428 243 -----FKALVLEFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHV 315 (457)
Q Consensus 243 -----~~~lv~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl 315 (457)
..++||||+++|+|.+++.... ...++.....++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH----~~~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH----HCcCccccCcHHHeEECCCCcEEE
Confidence 3689999999999999998764 23566778899999999999999 678999999999999999999999
Q ss_pred eccccccccCCCCCcc----------eeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHH
Q 044428 316 SDFGISKLLGEGDDSL----------IQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLK 381 (457)
Q Consensus 316 ~Dfg~~~~~~~~~~~~----------~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~ 381 (457)
+|||+|+.+....... ..+..+||+.|||||. .++.++|||||||++|||++ ||.... +..
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--~~~ 234 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--ERV 234 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHH
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--HHH
Confidence 9999999875432211 1223579999999993 37889999999999999997 775311 111
Q ss_pred HHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 382 HWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
..+ ..+.+... .....+....+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~--------~~~~~~~~------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTL--------TDVRNLKF------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHH--------HHHHTTCC------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHH--------HHHhcCCC------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111 11111100 0111222345678999999999999999999976
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.7e-48 Score=381.71 Aligned_cols=262 Identities=24% Similarity=0.307 Sum_probs=197.9
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeec------CCe
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSN------LDF 243 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 243 (457)
++|+..+.||+|+||+||+|+.. +|+.||||+++... ......+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57899999999999999999874 79999999997543 2344578899999999999999999998753 367
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 244 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
.|+|||||+ |+|.+++...+ .+++.....++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH----~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999995 78999998654 5999999999999999999999 67899999999999999999999999999987
Q ss_pred cCCCCC--cceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhc
Q 044428 324 LGEGDD--SLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396 (457)
Q Consensus 324 ~~~~~~--~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 396 (457)
+..... .......+||+.|+|||.+ ++.++||||+||++|||++|+.||......+....+.........+..
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence 643221 1223457899999999943 578899999999999999999999765443333332221111000000
Q ss_pred c-----------cccccc-ccchh-HHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 397 D-----------SNLVRR-EHSFS-AKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 397 d-----------~~l~~~-~~~~~-~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ..+... ..... ........+.+|+.+|++.||++|||+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 000000 00000 00012345789999999999999999999875
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.9e-47 Score=369.57 Aligned_cols=277 Identities=35% Similarity=0.568 Sum_probs=226.8
Q ss_pred ccCHHHHHHHhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecC
Q 044428 162 RISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNL 241 (457)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 241 (457)
++++.++..++++|+..+.||+|+||.||+|+..+|+.||||++..........+.+|++++++++||||+++++++...
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 44555667788999999999999999999999888999999998876656677899999999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecc
Q 044428 242 DFKALVLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDF 318 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 318 (457)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||.||| ..+|+||||||+||+++.++.+||+||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc----CCCeecCCCCHHHEEECCCCCEEEeec
Confidence 99999999999999999997654 35899999999999999999999 678999999999999999999999999
Q ss_pred ccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhcCCCCCCCCC---CCcHHHHHHhhcCch
Q 044428 319 GISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFSRKKPTNDLG---EMSLKHWVNQSLPHK 391 (457)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~---~~~l~~~~~~~~~~~ 391 (457)
|+++...............||+.|+||| ..++.++||||||+++|||+||+.||.... ......|........
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 9998764433333334456899999999 447889999999999999999999997632 223344433222211
Q ss_pred -hHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHH
Q 044428 392 -LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKV 447 (457)
Q Consensus 392 -~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~ 447 (457)
+.+.+++.+... ...+++..+.+++.+|++.||++|||+.|+++.|+.+.+
T Consensus 264 ~~~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 264 QLEQIVDPNLADK-----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CCCSSSSSSCTTC-----SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cHHHhcChhhccc-----cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 233333333221 123567789999999999999999999999999998865
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=9.8e-47 Score=370.17 Aligned_cols=197 Identities=24% Similarity=0.337 Sum_probs=166.6
Q ss_pred HHHHhhcCCcCCccCCCCceEEEEEEeC----CCCEEEEEEecccchhhHHHHHHHHHHHhhc-CCCccceeeeeeecCC
Q 044428 168 IQRATNEFDECNLLGIGSFGSVYKGTLS----DGTNVAIKIFNLQLERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLD 242 (457)
Q Consensus 168 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 242 (457)
+....++|+..+.||+|+||+||+|+.+ +++.||||++.... ....+.+|++++..+ +|||||++++++.+.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 3345678999999999999999999753 46789999986543 234678999999998 6999999999999999
Q ss_pred eeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCC-CcEEEeccccc
Q 044428 243 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDEN-MVAHVSDFGIS 321 (457)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~~ 321 (457)
..++||||+++|+|.+++.. +++.+...++.|++.||+||| +.+|+||||||+|||++.+ +.+||+|||+|
T Consensus 94 ~~~lvmE~~~g~~L~~~~~~----l~~~~~~~~~~qll~al~ylH----~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILNS----LSFQEVREYMLNLFKALKRIH----QFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEEEECCCCCCHHHHHTT----CCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEEEeCCCcccHHHHHcC----CCHHHHHHHHHHHHHHHHHHH----HCCeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 99999999999999999953 889999999999999999999 6789999999999999877 79999999999
Q ss_pred cccCCCCCc--------------------------ceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCC
Q 044428 322 KLLGEGDDS--------------------------LIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKK 370 (457)
Q Consensus 322 ~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~ 370 (457)
+........ ...+..+||+.|+|||.+ ++.++||||+||++|||+||+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 865432110 012235799999999933 6778999999999999999999
Q ss_pred CCCC
Q 044428 371 PTND 374 (457)
Q Consensus 371 p~~~ 374 (457)
||..
T Consensus 246 Pf~~ 249 (361)
T 4f9c_A 246 PFYK 249 (361)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 9964
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.6e-46 Score=363.58 Aligned_cols=279 Identities=35% Similarity=0.514 Sum_probs=232.1
Q ss_pred cccccCHHHHHHHhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccch-hhHHHHHHHHHHHhhcCCCccceeeee
Q 044428 159 TWRRISYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIKILSG 237 (457)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~ 237 (457)
....+++.++....++|...+.||+|+||.||+|+..+|+.||||++..... .....+.+|+++++.++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 4567899999999999999999999999999999988899999999976532 223368999999999999999999999
Q ss_pred eecCCeeEEEEeccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEE
Q 044428 238 CSNLDFKALVLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAH 314 (457)
Q Consensus 238 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~k 314 (457)
+...+..++||||+++|+|.+++.... ..+++..+..++.|++.||.|||..+ .++|+||||||+||+++.++.+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC-DPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS-SSCEECCCCSGGGEEECTTCCEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCeEeCCCchhhEEECCCCCEE
Confidence 999999999999999999999998654 34899999999999999999999543 34899999999999999999999
Q ss_pred EeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCC-----CCCCcHHHHHH
Q 044428 315 VSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTND-----LGEMSLKHWVN 385 (457)
Q Consensus 315 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~-----~~~~~l~~~~~ 385 (457)
|+|||+++....... .......||+.|+|||. .++.++||||||+++|||+||+.||.. ........|+.
T Consensus 175 l~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 999999987643322 23344669999999993 368899999999999999999999962 34556677776
Q ss_pred hhcCch-hHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 044428 386 QSLPHK-LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRK 444 (457)
Q Consensus 386 ~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~ 444 (457)
...... .....+..+.... ..+++..+.+++.+|++.||++|||+.||++.|+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNY-----KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSC-----CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHhhchhhhhhcChhhcccc-----CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 655544 4444454443222 23457789999999999999999999999999975
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.5e-46 Score=387.58 Aligned_cols=247 Identities=23% Similarity=0.267 Sum_probs=204.0
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEecc
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFM 251 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (457)
++|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+|+++|+.++|||||++++++.+.+..++|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 68999999999999999999875 79999999998765555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCC--CcEEEeccccccccCCCCC
Q 044428 252 PNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDEN--MVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 252 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~--~~~kl~Dfg~~~~~~~~~~ 329 (457)
++|+|.+++......+++.+...++.||+.||+||| ..+|+||||||+|||++.+ +.+||+|||+++.+....
T Consensus 237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH----~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH----ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 999999999876666999999999999999999999 6789999999999999854 899999999999875432
Q ss_pred cceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccccc
Q 044428 330 SLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 405 (457)
.....+||+.|+|||.+ ++.++||||+||++|||++|+.||...........+.... ..+..
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~---------~~~~~--- 377 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCD---------WNMDD--- 377 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC---------CCCCS---
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCC---------CCCCc---
Confidence 23346799999999944 6779999999999999999999997654322222221110 00000
Q ss_pred chhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 406 SFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 406 ~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.........+.+|+.+||+.||++|||+.|+++
T Consensus 378 --~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 378 --SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 001112345789999999999999999999976
No 21
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.2e-45 Score=351.89 Aligned_cols=278 Identities=29% Similarity=0.476 Sum_probs=226.5
Q ss_pred cccccCHHHHHHHhhcCCcC------CccCCCCceEEEEEEeCCCCEEEEEEecccc----hhhHHHHHHHHHHHhhcCC
Q 044428 159 TWRRISYLDIQRATNEFDEC------NLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL----ERTFVSFNSECEVLRNVRH 228 (457)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h 228 (457)
....+++.++..++++|... +.||+|+||.||+|+. +++.||||++.... ......+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999999887 8899999999999997 68899999987532 2345678999999999999
Q ss_pred CccceeeeeeecCCeeEEEEeccCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCee
Q 044428 229 RNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNIL 306 (457)
Q Consensus 229 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIl 306 (457)
|||+++++++...+..++||||+++|+|.+++... ...+++..+..++.|++.||.||| ..+++||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH----ENHHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecCCCCHHHEE
Confidence 99999999999999999999999999999999753 245899999999999999999999 678999999999999
Q ss_pred ecCCCcEEEeccccccccCCCCCcceeccccccccccCCCCC---CCCccchhhhhHHHHHHhcCCCCCCCCCCCc-HHH
Q 044428 307 LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI---VSTKCDVYSYGILLLETFSRKKPTNDLGEMS-LKH 382 (457)
Q Consensus 307 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~-l~~ 382 (457)
++.++.+||+|||+++...............||+.|+|||.+ ++.++||||||+++|||++|+.||....... +..
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence 999999999999999876544333333446799999999933 6789999999999999999999998643322 222
Q ss_pred HHHhh--cCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHH
Q 044428 383 WVNQS--LPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKV 447 (457)
Q Consensus 383 ~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~ 447 (457)
+.... ....+.+.+++.+... ...++..+.+++.+|++.+|.+||++.+|++.|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMNDA------DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCSCC------CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhcccccccc------chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 22211 1122445555443221 23456779999999999999999999999999998753
No 22
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.7e-46 Score=361.34 Aligned_cols=269 Identities=23% Similarity=0.318 Sum_probs=207.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCC----eeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD----FKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv 247 (457)
.++|+..+.||+|+||.||+|+.. ++.||||++..... ....+.+|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 367888899999999999999985 78999999975532 3345567999999999999999999998744 46999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC----------CeeeccCCCCCeeecCCCcEEEec
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA----------PIIHCDLKPSNILLDENMVAHVSD 317 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~----------~ivH~dlk~~NIll~~~~~~kl~D 317 (457)
|||+++|+|.+++.... +++..+..++.|++.||.||| .. +|+||||||+|||++.++.+||+|
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH----~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH----EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT----CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH----hhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999998765 899999999999999999999 55 899999999999999999999999
Q ss_pred cccccccCCCCCcceeccccccccccCCCCCC---------CCccchhhhhHHHHHHhcCCCCCCCCCCCc---HHHHHH
Q 044428 318 FGISKLLGEGDDSLIQTKTMATIGYMAPEGIV---------STKCDVYSYGILLLETFSRKKPTNDLGEMS---LKHWVN 385 (457)
Q Consensus 318 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~---l~~~~~ 385 (457)
||+++...............||+.|+|||.+. +.++|||||||++|||+||+.||....... ......
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 99998775543333334467999999999543 347899999999999999999997632211 111111
Q ss_pred hhcCc-hhHHhc-cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 386 QSLPH-KLAEVV-DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 386 ~~~~~-~~~~~~-d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
..... .+.+.+ ................++..+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 10000 011111 1111111111112234567799999999999999999999999999999764
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.4e-45 Score=350.13 Aligned_cols=261 Identities=24% Similarity=0.367 Sum_probs=211.6
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
.++|...+.||+|+||.||+|+.. +++.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 357888899999999999999975 6899999998766666677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 330 (457)
+++|+|.+++......+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+++........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 9999999999987667999999999999999999999 678999999999999999999999999999876433221
Q ss_pred c------------eeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHH
Q 044428 331 L------------IQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394 (457)
Q Consensus 331 ~------------~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~ 394 (457)
. ......||+.|+|||. .++.++||||||+++|||++|..|+........ ........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~------~~~~~~~~ 238 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM------DFGLNVRG 238 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCT------TSSBCHHH
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHH------HHhhhhhc
Confidence 1 0113579999999993 368899999999999999999999865321110 00001111
Q ss_pred hccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 395 VVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 395 ~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
..+.... ..++..+.+++.+|++.||++|||+.++++.|+++++....
T Consensus 239 ~~~~~~~---------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 239 FLDRYCP---------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp HHHHTCC---------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred cccccCC---------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 1111111 12244588999999999999999999999999999887654
No 24
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=9.9e-46 Score=382.77 Aligned_cols=243 Identities=20% Similarity=0.282 Sum_probs=193.9
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHH---HHHHHHHhhcCCCccceeeeeeecCCeeE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSF---NSECEVLRNVRHRNLIKILSGCSNLDFKA 245 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (457)
++|+..+.||+|+||.||+|+.. +|+.||||++.+.. ......+ ..++.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 67999999999999999999875 79999999997542 1122223 33466777889999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccC
Q 044428 246 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 325 (457)
+||||++||+|.++|.... .+++.....++.||+.||+||| ..+||||||||+|||++.+|++||+|||+|+.+.
T Consensus 269 lVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH----~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999998764 4899999999999999999999 7889999999999999999999999999999765
Q ss_pred CCCCcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccc
Q 044428 326 EGDDSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 326 ~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 400 (457)
... ....+||+.|||||.+ ++.++||||+||++|||++|+.||......+........ .....
T Consensus 344 ~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i--------~~~~~ 411 (689)
T 3v5w_A 344 KKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--------LTMAV 411 (689)
T ss_dssp SCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH--------HHCCC
T ss_pred CCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh--------cCCCC
Confidence 432 2346899999999943 678999999999999999999999764333322211111 01100
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHH
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIH-----TTNAA 439 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs-----~~ev~ 439 (457)
. ... .....+.+++.+|++.||.+|++ +.||.
T Consensus 412 ~-~p~------~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 412 E-LPD------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp C-CCT------TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred C-CCc------cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 0 000 11345789999999999999998 56664
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=7.1e-45 Score=359.77 Aligned_cols=259 Identities=23% Similarity=0.415 Sum_probs=211.7
Q ss_pred hhcCCcCCccCCCCceEEEEEEe--------CCCCEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCccceeeeeeecC
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL--------SDGTNVAIKIFNLQL-ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNL 241 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 241 (457)
.++|...+.||+|+||.||+|+. .++..||||+++... ......+.+|+++++++ +||||++++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 36788889999999999999985 245679999997653 34456799999999999 899999999999999
Q ss_pred CeeEEEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCee
Q 044428 242 DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNIL 306 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIl 306 (457)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||.||| ..+|+||||||+|||
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIl 235 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCIHRDLAARNVL 235 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCeeccccchhhEE
Confidence 99999999999999999998653 24789999999999999999999 678999999999999
Q ss_pred ecCCCcEEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHH
Q 044428 307 LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLK 381 (457)
Q Consensus 307 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~ 381 (457)
++.++.+||+|||+++...............+|+.|+|||. .++.++|||||||++|||+| |+.||.......+.
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~ 315 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999997654333323334567889999993 37889999999999999999 99999765443333
Q ss_pred HHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 382 HWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
..+...... .. +..++..+.+++.+||+.+|++||++.|+++.|+++.....+
T Consensus 316 ~~~~~~~~~--------~~---------~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 316 KLLKEGHRM--------DK---------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp HHHHTTCCC--------CC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHhcCCCC--------CC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 322221110 00 112355689999999999999999999999999999876544
No 26
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.5e-45 Score=365.65 Aligned_cols=257 Identities=27% Similarity=0.424 Sum_probs=209.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
.++|...+.||+|+||.||+|++. +++.||||+++... ......|.+|++++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467888899999999999999986 78999999987553 2334578899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
|+++|+|.+++......+++..+..++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++.......
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE----SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 99999999999876666899999999999999999999 67899999999999999999999999999986543211
Q ss_pred cceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 330 SLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
........+++.|+|||. .++.++|||||||++|||+| |+.||...........+..... +
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~----------~---- 334 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR----------L---- 334 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCC----------C----
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----------C----
Confidence 111122345788999993 36789999999999999999 9999976543222222221110 0
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
..+..++..+.+++.+||+.||++|||+.++++.|++++++.
T Consensus 335 ---~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 335 ---PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 001123556899999999999999999999999999998763
No 27
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-45 Score=353.75 Aligned_cols=271 Identities=24% Similarity=0.406 Sum_probs=206.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-----CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeec--CCee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-----SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN--LDFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 244 (457)
.++|+..+.||+|+||.||+|++ .+++.||||++..........+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35788889999999999999984 3688999999987766667789999999999999999999999855 3568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
++||||+++|+|.+++......+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG----TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 9999999999999999887767999999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCCc-ceeccccccccccCCC----CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch-h-HHhcc
Q 044428 325 GEGDDS-LIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK-L-AEVVD 397 (457)
Q Consensus 325 ~~~~~~-~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~-~-~~~~d 397 (457)
...... .......++..|+||| ..++.++||||||+++|||+||..|+..... ............. . .+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA-EFMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH-HHHHHHCTTCCTHHHHHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChH-HHHhhhcCccccchhHHHHHH
Confidence 543222 1223355788899999 4478899999999999999999999864211 1111111110000 0 01111
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 398 SNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 398 ~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
. +.. ......+..++..+.+++.+||+.||++|||+.|+++.|++++++.
T Consensus 244 ~-~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 244 L-LKN-NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp H-HHT-TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred H-Hhc-cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 0 000 0001112234567999999999999999999999999999998765
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=352.18 Aligned_cols=257 Identities=27% Similarity=0.444 Sum_probs=207.4
Q ss_pred hcCCcCCccCCCCceEEEEEEeC----CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
++|...+.||+|+||.||+|++. .+..||||++.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56778899999999999999974 34569999998653 34456799999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++|+|.+++......+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS----DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 9999999999999877667999999999999999999999 678999999999999999999999999999987543
Q ss_pred CCcc-eeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 328 DDSL-IQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 328 ~~~~-~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
.... ......+|+.|+|||. .++.++||||||+++|||++ |+.||...........+..... ..
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~--------~~-- 274 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR--------LP-- 274 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCC--------CC--
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCC--------CC--
Confidence 2221 2233556889999993 36889999999999999999 9999976543322222221110 00
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
.+..++..+.+++.+||+.||++||++.+|++.|+.+.+...
T Consensus 275 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 275 -------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred -------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 011235568999999999999999999999999999876543
No 29
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.6e-45 Score=361.43 Aligned_cols=256 Identities=26% Similarity=0.456 Sum_probs=197.8
Q ss_pred hcCCcCCccCCCCceEEEEEEeC----CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
++|...+.||+|+||.||+|+.. ++..||||+++... ......|.+|+.++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57888999999999999999864 57789999997653 34456799999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++|+|.+++......+++.+++.++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS----DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999887767999999999999999999999 678999999999999999999999999999876543
Q ss_pred CCcc-eeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 328 DDSL-IQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 328 ~~~~-~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
.... ......+++.|+||| ..++.++||||||+++|||++ |+.||...........+. ....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~------------~~~~ 268 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD------------EGYR 268 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHH------------TTEE
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH------------cCCC
Confidence 2211 112234578899999 347889999999999999998 999997644322222111 1111
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
.. .+.+++..+.+++.+||+.+|++||++.+|++.|+++.+..
T Consensus 269 ~~-----~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 LP-----PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp CC-----CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred CC-----CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 00 01123566899999999999999999999999999987654
No 30
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.9e-44 Score=347.69 Aligned_cols=257 Identities=21% Similarity=0.287 Sum_probs=210.0
Q ss_pred cccCHHHHHHHhhc----------CCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCC
Q 044428 161 RRISYLDIQRATNE----------FDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHR 229 (457)
Q Consensus 161 ~~~~~~~l~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ 229 (457)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++..........+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 46788888888865 666679999999999999986 7999999999876555667789999999999999
Q ss_pred ccceeeeeeecCCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC
Q 044428 230 NLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE 309 (457)
Q Consensus 230 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~ 309 (457)
||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||.||| ..+|+||||||+||+++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH----AQGVIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECC
Confidence 9999999999999999999999999999999765 4899999999999999999999 678999999999999999
Q ss_pred CCcEEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHH
Q 044428 310 NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVN 385 (457)
Q Consensus 310 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~ 385 (457)
++.+||+|||+++....... ......||+.|+|||. .++.++||||||+++|||++|+.||...........+.
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~ 254 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR 254 (321)
T ss_dssp TCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred CCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence 99999999999987643221 2234679999999993 36789999999999999999999997644322222221
Q ss_pred hhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 386 QSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 386 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
... .+.+.. ...++..+.+++.+|++.||++|||+.|+++
T Consensus 255 ~~~--------~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 255 DSP--------PPKLKN-------SHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HSS--------CCCCTT-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCC--------CCCcCc-------cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 111110 0112445889999999999999999999986
No 31
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.3e-44 Score=345.50 Aligned_cols=246 Identities=22% Similarity=0.303 Sum_probs=203.2
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
.++|...+.||+|+||.||+|.. .+|+.||||++..........+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999986 57899999999876655567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 330 (457)
+++|+|.+++.... +++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CTTCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHH----hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 99999999998764 899999999999999999999 67899999999999999999999999999987654322
Q ss_pred ceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccc
Q 044428 331 LIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHS 406 (457)
Q Consensus 331 ~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 406 (457)
......||+.|+|||. .++.++|||||||++|||+||+.||...........+.... .+.+.
T Consensus 172 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~--------~~~~~----- 237 (297)
T 3fxz_A 172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG--------TPELQ----- 237 (297)
T ss_dssp -CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC--------SCCCS-----
T ss_pred -ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--------CCCCC-----
Confidence 2334679999999993 37889999999999999999999997643221111111100 00000
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 407 FSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 407 ~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+..++..+.+++.+|++.||++|||+.|+++
T Consensus 238 --~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 238 --NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 01122456889999999999999999999975
No 32
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2e-44 Score=340.55 Aligned_cols=253 Identities=27% Similarity=0.392 Sum_probs=209.0
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEeccC
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMP 252 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 252 (457)
++|...+.||+|+||.||+|+..+++.||+|++..... ....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 57888899999999999999998899999999976532 34578999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCcce
Q 044428 253 NGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLI 332 (457)
Q Consensus 253 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 332 (457)
+|+|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++...... ...
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 163 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 163 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH----hCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccc
Confidence 99999999887777999999999999999999999 6779999999999999999999999999998764321 112
Q ss_pred eccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccch
Q 044428 333 QTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSF 407 (457)
Q Consensus 333 ~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 407 (457)
.....+|+.|+||| ..++.++||||+|+++|||++ |+.||...........+..... ... .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~--------~~~---~--- 229 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--------LYK---P--- 229 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--------CCC---C---
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCcc--------CCC---C---
Confidence 23356788899999 447889999999999999999 9999976443222222211100 000 0
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 408 SAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 408 ~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
..++..+.+++.+|++.+|++||++.|+++.|+++.+.
T Consensus 230 ---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 ---RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 01134588999999999999999999999999998764
No 33
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.8e-44 Score=345.91 Aligned_cols=256 Identities=26% Similarity=0.400 Sum_probs=198.6
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
..++|+..+.||+|+||.||+|+. +|+.||||++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356788889999999999999987 58899999987543 334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCC--eeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 249 EFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGLALEYLHYGHALAP--IIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~--ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
||+++|+|.+++.... ..+++..++.++.|++.||+||| ..+ |+||||||+||+++.++.+||+|||+++..
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH----NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH----TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH----cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 9999999999998754 23899999999999999999999 666 999999999999999999999999999865
Q ss_pred CCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccc
Q 044428 325 GEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 400 (457)
.... .......||+.|+|||.+ .+.++||||||+++|||+||+.||...........+..... ...+
T Consensus 190 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-------~~~~ 260 (309)
T 3p86_A 190 ASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK-------RLEI 260 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCC-------CCCC
T ss_pred cccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-------CCCC
Confidence 3321 122346799999999933 67899999999999999999999976543222221111000 0000
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
+..++..+.+++.+||+.+|++|||+.++++.|+.+.+..
T Consensus 261 ---------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 261 ---------PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp ---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ---------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 0122456889999999999999999999999999886543
No 34
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.7e-44 Score=339.36 Aligned_cols=254 Identities=26% Similarity=0.372 Sum_probs=208.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEecc
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFM 251 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (457)
.++|...+.||+|+||.||+|+..++..||||++..... ....+.+|++++.+++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467888899999999999999999888999999976532 3456899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCcc
Q 044428 252 PNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331 (457)
Q Consensus 252 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 331 (457)
++++|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++....... .
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~ 160 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE----SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-V 160 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH----HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-E
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-h
Confidence 999999999877666999999999999999999999 67899999999999999999999999999987654322 2
Q ss_pred eeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccc
Q 044428 332 IQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHS 406 (457)
Q Consensus 332 ~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 406 (457)
......+|+.|+|||. .++.++||||||+++|||+| |+.||...........+..... ....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-----------~~~~-- 227 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHR-----------LYRP-- 227 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC-----------CCCC--
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCC-----------CCCC--
Confidence 2334567788999994 36889999999999999999 9999976443222211111100 0000
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 407 FSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 407 ~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
..++..+.+++.+|++.+|++|||+.|+++.|+.++++
T Consensus 228 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 ----HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp ----TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ----CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 01134588999999999999999999999999988765
No 35
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-44 Score=351.95 Aligned_cols=264 Identities=26% Similarity=0.418 Sum_probs=209.7
Q ss_pred HHHhhcCCcCCccCCCCceEEEEEEeC------CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecC
Q 044428 169 QRATNEFDECNLLGIGSFGSVYKGTLS------DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNL 241 (457)
Q Consensus 169 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 241 (457)
....++|...+.||+|+||.||+|+.. +++.||||+++... ......+.+|+.++++++||||+++++++...
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 334578999999999999999999874 34889999998653 33456799999999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 044428 242 DFKALVLEFMPNGSLEKWLYSHN-----------------------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHC 298 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~ 298 (457)
+..++||||+++|+|.+++.... ..+++.+++.++.|++.||.||| ..+|+||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH----~~~ivH~ 198 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS----ERKFVHR 198 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCS
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecC
Confidence 99999999999999999998642 45899999999999999999999 6789999
Q ss_pred cCCCCCeeecCCCcEEEeccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCC
Q 044428 299 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTN 373 (457)
Q Consensus 299 dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~ 373 (457)
||||+||+++.++.+||+|||+++...............+|+.|+||| ..++.++||||||+++|||+| |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 999999999999999999999998764432222233466899999999 447889999999999999999 999997
Q ss_pred CCCCCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhhhh
Q 044428 374 DLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLDDV 453 (457)
Q Consensus 374 ~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 453 (457)
..........+.. ...... +..++..+.+++.+||+.+|++||++.++++.|+++.+++...+
T Consensus 279 ~~~~~~~~~~~~~-----------~~~~~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~~ 341 (343)
T 1luf_A 279 GMAHEEVIYYVRD-----------GNILAC------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTV 341 (343)
T ss_dssp TSCHHHHHHHHHT-----------TCCCCC------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC------
T ss_pred CCChHHHHHHHhC-----------CCcCCC------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhhc
Confidence 6443222222111 111000 01234568999999999999999999999999999988776543
No 36
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.1e-44 Score=347.80 Aligned_cols=255 Identities=24% Similarity=0.417 Sum_probs=201.6
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCE----EEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTN----VAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~----vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
++|+..+.||+|+||.||+|++. +|+. ||+|.+.... ......+.+|+.++++++||||++++++|.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 57888899999999999999864 4443 5888876433 344567999999999999999999999998765 789
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
|+||+++|+|.+++......+++..++.++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 99999999999999987777999999999999999999999 67899999999999999999999999999998765
Q ss_pred CCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
...........+|+.|+||| ..++.++|||||||++|||+| |+.||.......+...+......
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------- 238 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL----------- 238 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-----------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCC-----------
Confidence 44433344466788999999 447889999999999999999 99999875544443333321110
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
.. +..++..+.+++.+||+.+|++||++.|+++.|+.+....
T Consensus 239 -~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 239 -PQ-----PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -CC-----CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred -CC-----CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 00 1112456889999999999999999999999999886543
No 37
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8.5e-44 Score=338.72 Aligned_cols=254 Identities=24% Similarity=0.371 Sum_probs=206.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEecc
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFM 251 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (457)
.++|...+.||+|+||.||+|+..++..||+|++..... ....+.+|++++.+++||||+++++++...+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 467888899999999999999999888999999976532 3456899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCcc
Q 044428 252 PNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL 331 (457)
Q Consensus 252 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 331 (457)
++|+|.+++......+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~ 176 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YT 176 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HH
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCccceEEEcCCCCEEEccccccccccccc-cc
Confidence 999999999875556999999999999999999999 6789999999999999999999999999998764321 11
Q ss_pred eeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccc
Q 044428 332 IQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHS 406 (457)
Q Consensus 332 ~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 406 (457)
......+|+.|+||| ..++.++||||||+++|||+| |+.||...........+..... ... .
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~----~- 243 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR--------LYR----P- 243 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--------CCC----C-
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccC--------CCC----C-
Confidence 223355788899999 347889999999999999998 9999976543222222221110 000 0
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 407 FSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 407 ~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
..++..+.+++.+|++.+|++|||+.++++.|.++.++
T Consensus 244 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 ----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 01134588999999999999999999999999998764
No 38
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1e-43 Score=345.52 Aligned_cols=243 Identities=23% Similarity=0.309 Sum_probs=200.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46789999999999999999997 589999999997543 334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++|+|.+++...+ .+++.....++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH----QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp CCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred ECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999997654 4899999999999999999999 6789999999999999999999999999998765432
Q ss_pred CcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
. .....||+.|+|||.+ .+.++||||+||++|||++|+.||.......+...+.. .... .
T Consensus 169 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~-----------~~~~-~ 233 (328)
T 3fe3_A 169 K---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR-----------GKYR-I 233 (328)
T ss_dssp G---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------CCCC-C
T ss_pred c---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------CCCC-C
Confidence 2 3446799999999943 35789999999999999999999976442222221111 0000 0
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.. .++..+.+++.+|++.||.+|||+.|+++
T Consensus 234 p~------~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 234 PF------YMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CT------TSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CC------CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 11345789999999999999999999975
No 39
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6.1e-44 Score=351.43 Aligned_cols=266 Identities=23% Similarity=0.354 Sum_probs=212.2
Q ss_pred cCHHHHHHHhhcCCcCCccCCCCceEEEEEEe------CCCCEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCcccee
Q 044428 163 ISYLDIQRATNEFDECNLLGIGSFGSVYKGTL------SDGTNVAIKIFNLQL-ERTFVSFNSECEVLRNV-RHRNLIKI 234 (457)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l 234 (457)
+...+.....++|...+.||+|+||.||+|++ .+++.||||+++... ......+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455556678999999999999999999974 256889999997643 33456799999999999 79999999
Q ss_pred eeeeecCC-eeEEEEeccCCCCHHHHHhhCCC------------------------------------------------
Q 044428 235 LSGCSNLD-FKALVLEFMPNGSLEKWLYSHNY------------------------------------------------ 265 (457)
Q Consensus 235 ~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------ 265 (457)
++++...+ ..++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99988755 48999999999999999986532
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 266 -----------------FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 266 -----------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
.+++..++.++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 1889999999999999999999 6789999999999999999999999999998765444
Q ss_pred CcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcH-HHHHHhhcCchhHHhccccccc
Q 044428 329 DSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSL-KHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l-~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
.........||+.|+||| ..++.++||||||+++|||+| |+.||........ ...+.... .....
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~- 318 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT--------RMRAP- 318 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC--------CCCCC-
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC--------CCCCC-
Confidence 433444567899999999 447889999999999999999 9999976432211 11111100 00000
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
..++..+.+++.+|++.||++|||+.|+++.|+++.+..
T Consensus 319 --------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 319 --------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp --------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 112446889999999999999999999999999988754
No 40
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=351.51 Aligned_cols=257 Identities=25% Similarity=0.403 Sum_probs=210.1
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC--------CCCEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCccceeeeeeecC
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS--------DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNL 241 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 241 (457)
.++|...+.||+|+||.||+|+.. ++..||||++.... ......+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 367888899999999999999852 34679999997653 33456789999999999 999999999999999
Q ss_pred CeeEEEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCee
Q 044428 242 DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNIL 306 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIl 306 (457)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||.||| ..+|+||||||+|||
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLAARNVL 223 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCcceEE
Confidence 99999999999999999998754 34899999999999999999999 678999999999999
Q ss_pred ecCCCcEEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHH
Q 044428 307 LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLK 381 (457)
Q Consensus 307 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~ 381 (457)
++.++.+||+|||+++...............+|+.|+|||. .++.++|||||||++|||++ |+.||.......+.
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~ 303 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999987755433333445668899999993 47889999999999999999 99999764432222
Q ss_pred HHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 382 HWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
..+..... ... +..++..+.+++.+||+.+|++|||+.||++.|+++....
T Consensus 304 ~~~~~~~~--------~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 304 KLLKEGHR--------MDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHTTCC--------CCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHcCCC--------CCC---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 22221110 000 0122456899999999999999999999999999987653
No 41
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=6.2e-44 Score=352.37 Aligned_cols=266 Identities=14% Similarity=0.136 Sum_probs=207.5
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeCC------CCEEEEEEecccchhh-----------HHHHHHHHHHHhhcCCCccce
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLSD------GTNVAIKIFNLQLERT-----------FVSFNSECEVLRNVRHRNLIK 233 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 233 (457)
..++|...+.||+|+||.||+|++.+ ++.||||++....... ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34589999999999999999998764 4789999987543211 123445666777889999999
Q ss_pred eeeeeecC----CeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec-
Q 044428 234 ILSGCSNL----DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD- 308 (457)
Q Consensus 234 l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~- 308 (457)
+++++... ...++||||+ +++|.+++......+++..++.++.|++.||.||| ..+|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH----~~~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH----EHEYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeEEecCCHHHEEEec
Confidence 99998764 4589999999 99999999887667999999999999999999999 67899999999999999
Q ss_pred -CCCcEEEeccccccccCCCCCcc-----eeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCC-CC
Q 044428 309 -ENMVAHVSDFGISKLLGEGDDSL-----IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDL-GE 377 (457)
Q Consensus 309 -~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~-~~ 377 (457)
.++.+||+|||+++.+....... ......||+.|+|||.+ ++.++|||||||++|||+||+.||... ..
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 88999999999998764322111 11234599999999933 678999999999999999999999853 22
Q ss_pred CcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 378 MSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 378 ~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
..............+.+++++.+... .++..+.+++..|++.+|++||++.++++.|+++.++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAA--------NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTT--------CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccc--------cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 22333333333333445554443211 12556899999999999999999999999999988764
No 42
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.7e-43 Score=341.55 Aligned_cols=256 Identities=27% Similarity=0.416 Sum_probs=210.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEe------CCCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL------SDGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 244 (457)
.++|...+.||+|+||.||+|+. .++..||||++.... ......+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788889999999999999986 245889999997643 34456789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCC
Q 044428 245 ALVLEFMPNGSLEKWLYSHN-----------------------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLK 301 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk 301 (457)
++||||+++|+|.+++.... ..+++..++.++.|++.||.||| ..+|+|||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dik 177 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA----EMKLVHRDLA 177 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH----HTTEECCCCS
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH----HCCCcccccc
Confidence 99999999999999998653 23789999999999999999999 6789999999
Q ss_pred CCCeeecCCCcEEEeccccccccCCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhc-CCCCCCCCC
Q 044428 302 PSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFS-RKKPTNDLG 376 (457)
Q Consensus 302 ~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~ 376 (457)
|+||+++.++.+||+|||+++...............+++.|+|||.+ ++.++||||||+++|||+| |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999877554333333445678899999943 7889999999999999999 999997655
Q ss_pred CCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 377 EMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 377 ~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
...+...+....... . +..++..+.+++.+|++.||++||++.|+++.|+++.++
T Consensus 258 ~~~~~~~~~~~~~~~--------~---------~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 PERLFNLLKTGHRME--------R---------PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GGGHHHHHHTTCCCC--------C---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhcCCcCC--------C---------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 444333332211100 0 012245689999999999999999999999999998764
No 43
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-44 Score=353.90 Aligned_cols=257 Identities=23% Similarity=0.363 Sum_probs=207.0
Q ss_pred hcCCcCCccCCCCceEEEEEEeC------CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS------DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKA 245 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (457)
++|...+.||+|+||.||+|++. ++..||||++.... ......+.+|+.++++++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 57888899999999999999853 46789999997542 344557899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC---cEEEe
Q 044428 246 LVLEFMPNGSLEKWLYSHN------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM---VAHVS 316 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~---~~kl~ 316 (457)
+||||+++|+|.+++.... ..+++..++.++.|++.||+||| ..+|+||||||+|||++.++ .+||+
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE----ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 9999999999999998643 35899999999999999999999 67899999999999999544 59999
Q ss_pred ccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCch
Q 044428 317 DFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHK 391 (457)
Q Consensus 317 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~ 391 (457)
|||+++...............+|+.|+|||. .++.++|||||||++|||+| |+.||.......+...+......
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~- 305 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM- 305 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC-
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 9999986533222222334567999999993 47889999999999999998 99999765433322222211100
Q ss_pred hHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 392 LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 392 ~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
.. +..++..+.+++.+||+.+|++||++.+|++.|+.+.+...
T Consensus 306 ----------~~------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 306 ----------DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp ----------CC------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred ----------CC------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 00 11234568899999999999999999999999999877553
No 44
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.1e-43 Score=336.81 Aligned_cols=260 Identities=25% Similarity=0.391 Sum_probs=197.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhh--cCCCccceeeeeeec----CCeeE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRN--VRHRNLIKILSGCSN----LDFKA 245 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~ 245 (457)
.++|...+.||+|+||.||+|+. +|+.||||++.... ...+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46889999999999999999998 68999999987542 3445667777766 799999999998654 35689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeccCCCCCeeecCCCcEEEeccccc
Q 044428 246 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA----LAPIIHCDLKPSNILLDENMVAHVSDFGIS 321 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~----~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 321 (457)
+||||+++|+|.+++... .+++..++.++.|++.||+|||.... ..+|+||||||+|||++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 48999999999999999999993211 467999999999999999999999999999
Q ss_pred cccCCCCCcc--eeccccccccccCCCCCC----------CCccchhhhhHHHHHHhcC----------CCCCCCCC--C
Q 044428 322 KLLGEGDDSL--IQTKTMATIGYMAPEGIV----------STKCDVYSYGILLLETFSR----------KKPTNDLG--E 377 (457)
Q Consensus 322 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~----------~~~~Dv~s~Gvvl~el~tg----------~~p~~~~~--~ 377 (457)
+......... ......||+.|+|||.+. +.++|||||||++|||+|| +.||.... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 8764433221 122357999999999442 2589999999999999999 77876522 1
Q ss_pred CcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 044428 378 MSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445 (457)
Q Consensus 378 ~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i 445 (457)
............. ...+.+. .......++..+.+++.+||+.||++|||+.||++.|++|
T Consensus 241 ~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVD----QQRPNIP----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTS----CCCCCCC----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhcc----CCCCCCC----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1111111111000 0011111 0111224567899999999999999999999999999876
No 45
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.6e-43 Score=337.66 Aligned_cols=255 Identities=25% Similarity=0.348 Sum_probs=199.4
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|...+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57888999999999999999864 78999999986432 334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 91 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH----DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp ECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999998764 4899999999999999999999 6789999999999999999999999999998764322
Q ss_pred CcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 329 DSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
. .......||+.|+||| ..++.++||||||+++|||+||+.||......................-.
T Consensus 166 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------- 236 (294)
T 4eqm_A 166 L-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDV-------- 236 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHS--------
T ss_pred c-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhc--------
Confidence 1 1223356999999999 33678999999999999999999999764321111100000000000000
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHhH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERI-HTTNAAAKLRKIK 446 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RP-s~~ev~~~L~~i~ 446 (457)
..+++..+.+++.+|++.||++|| ++.++.+.|+.+.
T Consensus 237 -----~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 237 -----RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp -----CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred -----ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 012245689999999999999999 8999998888754
No 46
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.1e-43 Score=339.83 Aligned_cols=262 Identities=23% Similarity=0.297 Sum_probs=202.5
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
.++|+..+.||+|+||.||+|+..+|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46788999999999999999999889999999997543 2234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
|++ |+|.+++......+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++.......
T Consensus 100 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 100 FME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH----QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 997 5899988877767999999999999999999999 67899999999999999999999999999987643222
Q ss_pred cceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc----hhHHhcc---
Q 044428 330 SLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH----KLAEVVD--- 397 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~----~~~~~~d--- 397 (457)
......||+.|+|||.+ ++.++|||||||++|||++|+.||......+....+...... .+....+
T Consensus 175 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 175 --SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp -----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred --cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccch
Confidence 22345789999999932 578899999999999999999999875554444333222111 0111100
Q ss_pred ---cccc--ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 398 ---SNLV--RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 398 ---~~l~--~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.... ...........+..++.+++.+|++.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000 000000001112346789999999999999999999975
No 47
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2e-43 Score=340.47 Aligned_cols=258 Identities=28% Similarity=0.459 Sum_probs=201.2
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
.++|...+.||+|+||.||+|+.. ..+|+|+++.. .......+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 357888899999999999999864 46999988753 2344567999999999999999999999875 455899999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
|+++|+|.+++......+++.+++.++.|++.||+||| ..+|+||||||+|||+++++.+||+|||+++.......
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH----AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 99999999999877777999999999999999999999 67899999999999999999999999999986543222
Q ss_pred cceeccccccccccCCCCC-------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHH-HHhhcCchhHHhcccccc
Q 044428 330 SLIQTKTMATIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHW-VNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~~-------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~-~~~~~~~~~~~~~d~~l~ 401 (457)
........||+.|+|||.+ ++.++||||||+++|||++|+.||........... +.... ..+.+.
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-------~~~~~~ 260 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY-------ASPDLS 260 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTC-------CCCCST
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCC-------CCcchh
Confidence 2333446799999999943 56689999999999999999999976443221111 11110 111111
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
.. ...++..+.+++.+|++.+|++||++.|+++.|+.+...+
T Consensus 261 ~~------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 261 KL------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TS------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hh------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 10 0123556899999999999999999999999999887654
No 48
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.9e-43 Score=358.47 Aligned_cols=248 Identities=30% Similarity=0.422 Sum_probs=204.5
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCC-eeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD-FKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 250 (457)
.++|...+.||+|+||.||+|++. |+.||||+++... ....|.+|++++++++||||+++++++...+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 467888899999999999999985 7899999997653 4567999999999999999999999987665 78999999
Q ss_pred cCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 251 MPNGSLEKWLYSHNY-FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
+++|+|.+++..... .+++..++.++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 999999999987653 4789999999999999999999 678999999999999999999999999999864321
Q ss_pred cceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 330 SLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
.....+++.|+|||. .++.++|||||||++|||+| |+.||...........+......
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-------------- 405 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-------------- 405 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC--------------
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--------------
Confidence 122357889999993 47889999999999999999 99999875544443333221110
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
..+..++..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 406 ---~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 406 ---DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 01113456789999999999999999999999999998754
No 49
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.7e-43 Score=334.09 Aligned_cols=256 Identities=22% Similarity=0.347 Sum_probs=197.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC----CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
.++|+..+.||+|+||.||+|+.. .+..||+|++.... ......+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 467888899999999999999874 24579999987643 334567899999999999999999999985 467899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence 99999999999999887767999999999999999999999 67899999999999999999999999999987643
Q ss_pred CCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
... .......+++.|+||| ..++.++||||||+++|||++ |..||...........+...... .+
T Consensus 169 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~--------~~- 238 (281)
T 1mp8_A 169 STY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL--------PM- 238 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC--------CC-
T ss_pred ccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC--------CC-
Confidence 221 1223355788999999 347889999999999999997 99999875544433333221100 00
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
+..++..+.+++.+|++.||++|||+.|+++.|+++.++..
T Consensus 239 --------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 239 --------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 01234568899999999999999999999999999987654
No 50
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3e-43 Score=339.65 Aligned_cols=259 Identities=23% Similarity=0.354 Sum_probs=211.4
Q ss_pred hhcCCcCCccCCCCceEEEEEEe------CCCCEEEEEEecccch-hhHHHHHHHHHHHhhc-CCCccceeeeeeecCCe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL------SDGTNVAIKIFNLQLE-RTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDF 243 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 243 (457)
.++|...+.||+|+||.||+|+. .+++.||||++..... .....+.+|+.++.++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46788889999999999999985 3578899999976542 3456789999999999 99999999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCee
Q 044428 244 KALVLEFMPNGSLEKWLYSHNY-----------------FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNIL 306 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~-----------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIl 306 (457)
.++||||+++|+|.+++..... .+++..++.++.|++.||.||| ..+|+||||||+||+
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA----SKNCIHRDLAARNIL 177 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCccceEE
Confidence 9999999999999999987542 4899999999999999999999 678999999999999
Q ss_pred ecCCCcEEEeccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcH-
Q 044428 307 LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSL- 380 (457)
Q Consensus 307 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l- 380 (457)
++.++.+||+|||+++...............+|+.|+||| ..++.++||||||+++|||+| |+.||........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 9999999999999998875544333334466788999999 447889999999999999999 9999976443221
Q ss_pred HHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 381 KHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
...+... ..... +..++..+.+++.+|++.||.+|||+.|+++.|+++.++...
T Consensus 258 ~~~~~~~--------~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 311 (313)
T 1t46_A 258 YKMIKEG--------FRMLS---------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311 (313)
T ss_dssp HHHHHHT--------CCCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC
T ss_pred HHHhccC--------CCCCC---------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhc
Confidence 1111111 00000 011245689999999999999999999999999998876544
No 51
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=346.69 Aligned_cols=246 Identities=25% Similarity=0.333 Sum_probs=193.3
Q ss_pred HhhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
..++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 346888999999999999999986 479999999997643 233456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||++++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH----SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 9999999999997654 4899999999999999999999 6789999999999999999999999999988654322
Q ss_pred CcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
. .......||+.|+|||.+ .+.++||||+||++|||++|+.||...........+... ... .
T Consensus 163 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~-----------~~~-~ 229 (347)
T 3zgw_A 163 D-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG-----------KYD-V 229 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----------CCC-C
T ss_pred C-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-----------CCC-C
Confidence 1 123346799999999943 477899999999999999999999764422222211111 000 0
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ......+.+++.+|++.||++|||+.|+++
T Consensus 230 p------~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 230 P------KWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp C------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C------CCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 0 011345788999999999999999999986
No 52
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.4e-44 Score=363.04 Aligned_cols=254 Identities=23% Similarity=0.424 Sum_probs=206.9
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
...++|...+.||+|+||.||+|++.++..||||+++... .....|.+|++++++++||||+++++++. .+..++|||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 3456788889999999999999999889999999997643 34678999999999999999999999987 567899999
Q ss_pred ccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 250 FMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
|+++|+|.+++.... ..+++..++.++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE----QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 999999999998543 35889999999999999999999 6779999999999999999999999999998764321
Q ss_pred CcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 329 DSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
........+++.|+||| ..++.++|||||||++|||+| |+.||...........+.... . +
T Consensus 339 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~--------~--~--- 404 (454)
T 1qcf_A 339 -YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY--------R--M--- 404 (454)
T ss_dssp -HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC--------C--C---
T ss_pred -eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--------C--C---
Confidence 11122345688999999 447889999999999999999 999997644322222221110 0 0
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKV 447 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~ 447 (457)
..+..++..+.+++.+||+.||++|||+.+|++.|+++..
T Consensus 405 ----~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 405 ----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 0112345678999999999999999999999999988754
No 53
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-43 Score=344.95 Aligned_cols=263 Identities=23% Similarity=0.373 Sum_probs=206.4
Q ss_pred HhhcCCcCCccCCCCceEEEEEEe------CCCCEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCC
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTL------SDGTNVAIKIFNLQL-ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLD 242 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 242 (457)
..++|...+.||+|+||.||+|+. .++..||||++.... ......+.+|+.++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 357888899999999999999986 246689999997543 23456789999999999 8999999999999999
Q ss_pred eeEEEEeccCCCCHHHHHhhCCC----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 044428 243 FKALVLEFMPNGSLEKWLYSHNY----------------------FLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300 (457)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~----------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dl 300 (457)
..++||||+++|+|.+++..... .+++..++.++.|++.||.||| ..+|+||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Di 198 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE----FKSCVHRDL 198 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH----HTTEEETTC
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCC
Confidence 99999999999999999986542 3789999999999999999999 678999999
Q ss_pred CCCCeeecCCCcEEEeccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCC
Q 044428 301 KPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDL 375 (457)
Q Consensus 301 k~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~ 375 (457)
||+||+++.++.+||+|||+++...............+|+.|+||| ..++.++||||||+++|||+| |..||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999999999999999999998765444333344566788999999 447889999999999999998 99999764
Q ss_pred CCCc-HHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhhhhh
Q 044428 376 GEMS-LKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLDDVA 454 (457)
Q Consensus 376 ~~~~-l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~~~~ 454 (457)
.... ....+.... .... +..++..+.+++.+||+.||.+|||+.|+++.|+.+.....+++.
T Consensus 279 ~~~~~~~~~~~~~~--------~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~ 341 (344)
T 1rjb_A 279 PVDANFYKLIQNGF--------KMDQ---------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMY 341 (344)
T ss_dssp CCSHHHHHHHHTTC--------CCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--------
T ss_pred CcHHHHHHHHhcCC--------CCCC---------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHHh
Confidence 4221 111111111 0000 011245689999999999999999999999999998777665543
No 54
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.8e-43 Score=332.03 Aligned_cols=253 Identities=27% Similarity=0.387 Sum_probs=208.2
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEeccC
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMP 252 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 252 (457)
++|...+.||+|+||.||+|+..+++.||+|++..... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 57888889999999999999998889999999976532 34678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCcce
Q 044428 253 NGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLI 332 (457)
Q Consensus 253 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 332 (457)
+++|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++...... ...
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~ 161 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 161 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCchheEEECCCCCEEEccccccccccccc-ccc
Confidence 99999999887667899999999999999999999 6789999999999999999999999999998764321 112
Q ss_pred eccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccch
Q 044428 333 QTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSF 407 (457)
Q Consensus 333 ~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 407 (457)
.....+++.|+||| ..++.++||||||+++|||++ |+.||...........+..... ... .
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~--------~~~---~--- 227 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--------LYK---P--- 227 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--------CCC---C---
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc--------CCC---C---
Confidence 23355788999999 447889999999999999999 8999976443222222111110 000 0
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 408 SAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 408 ~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
..++..+.+++.+|++.+|++||++.++++.|+++.+.
T Consensus 228 ---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 ---RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 01234588999999999999999999999999998763
No 55
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.1e-43 Score=343.06 Aligned_cols=256 Identities=23% Similarity=0.395 Sum_probs=203.8
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCE----EEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTN----VAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~----vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
++|...+.||+|+||.||+|++. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46788889999999999999864 4554 7888775432 233456788999999999999999999986 456889
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++......+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE----EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH----HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH----hCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999999877666899999999999999999999 67899999999999999999999999999998765
Q ss_pred CCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
...........++..|+||| ..++.++||||||+++|||+| |+.||...........+........
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 238 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ--------- 238 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCC---------
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC---------
Confidence 44443444567888999999 447889999999999999999 9999987554444333332111000
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
+..++..+.+++.+||+.+|++||++.++++.|+.+.....
T Consensus 239 --------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~ 279 (325)
T 3kex_A 239 --------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPP 279 (325)
T ss_dssp --------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHH
T ss_pred --------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 00123347889999999999999999999999998865443
No 56
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-43 Score=339.74 Aligned_cols=247 Identities=21% Similarity=0.293 Sum_probs=202.5
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
.++|...+.||+|+||.||+|+.. +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467888999999999999999875 68899999987543 3345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC--CCcEEEeccccccccCCCC
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE--NMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~--~~~~kl~Dfg~~~~~~~~~ 328 (457)
+++|+|.+++......+++..+..++.|++.||.||| ..+|+||||||+|||++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH----SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 9999999999877667999999999999999999999 678999999999999987 7899999999998875432
Q ss_pred CcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
. .....||+.|+|||.+ ++.++|||||||++|||++|+.||...........+.... ..
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-----------~~--- 221 (321)
T 1tki_A 159 N---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE-----------YT--- 221 (321)
T ss_dssp E---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC-----------CC---
T ss_pred c---cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCC-----------CC---
Confidence 2 2345689999999944 5789999999999999999999997644322222111110 00
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.......+.+..+.+++.+|++.||++|||+.|+++
T Consensus 222 ~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 222 FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000111123456889999999999999999999986
No 57
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.7e-43 Score=340.83 Aligned_cols=257 Identities=23% Similarity=0.437 Sum_probs=192.4
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeCC-C---CEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCccceeeeeeecCCee
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLSD-G---TNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK 244 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g---~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 244 (457)
..++|...+.||+|+||.||+|+... + ..||||++... .......+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34678999999999999999998753 3 27999999764 334567899999999999999999999999877655
Q ss_pred ------EEEEeccCCCCHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcE
Q 044428 245 ------ALVLEFMPNGSLEKWLYSHN-----YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVA 313 (457)
Q Consensus 245 ------~lv~e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~ 313 (457)
++||||+++|+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+||++++++.+
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH----~~~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS----SRNFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH----cCCcccCCCCcceEEEcCCCCE
Confidence 99999999999999996432 25899999999999999999999 6789999999999999999999
Q ss_pred EEeccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhc
Q 044428 314 HVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSL 388 (457)
Q Consensus 314 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~ 388 (457)
||+|||+++...............+++.|+||| ..++.++||||||+++|||++ |+.||...........+....
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~ 256 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN 256 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC
Confidence 999999998765443333333456788999999 347889999999999999999 999998755444333222211
Q ss_pred CchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 389 PHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 389 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
. ... +..++..+.+++.+|++.||++|||+.++++.|+++.+.
T Consensus 257 ~-----------~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 257 R-----------LKQ------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp C-----------CCC------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C-----------CCC------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0 000 012245689999999999999999999999999998654
No 58
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6e-43 Score=340.58 Aligned_cols=259 Identities=18% Similarity=0.170 Sum_probs=208.2
Q ss_pred hcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEEEEec
Q 044428 173 NEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+|+++++++ +||||+++++++...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 5788889999999999999986 5789999999875432 34588999999999 999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc-----EEEeccccccccC
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV-----AHVSDFGISKLLG 325 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~-----~kl~Dfg~~~~~~ 325 (457)
+ +++|.+++......+++..+..++.|++.||+||| ..+|+||||||+|||++.++. +||+|||+++.+.
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 87 L-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH----SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 9 99999999976667999999999999999999999 678999999999999998887 9999999999764
Q ss_pred CCCCcc-----eeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhc
Q 044428 326 EGDDSL-----IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396 (457)
Q Consensus 326 ~~~~~~-----~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 396 (457)
...... ......||+.|+|||.+ ++.++|||||||++|||++|+.||..................... .
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~--~ 239 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA--T 239 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH--S
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc--C
Confidence 432211 12346799999999943 677999999999999999999999875544443332221100000 0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 397 d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
... .....++ .+.+++..|++.+|.+||++.+|.+.|+++.++.
T Consensus 240 ~~~--------~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 240 PIE--------VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp CHH--------HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CHH--------HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 000 0000124 6899999999999999999999999999887764
No 59
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=7.2e-43 Score=340.62 Aligned_cols=258 Identities=23% Similarity=0.414 Sum_probs=209.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC--------CCCEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCccceeeeeeecC
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS--------DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNL 241 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 241 (457)
.++|...+.||+|+||.||+|+.. ++..||||++.... ......+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 468888899999999999999863 56789999997653 34456789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCee
Q 044428 242 DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNIL 306 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIl 306 (457)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||.||| ..+|+||||||+||+
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCIHRDLAARNVL 189 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCccceEE
Confidence 99999999999999999998653 23889999999999999999999 678999999999999
Q ss_pred ecCCCcEEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHH
Q 044428 307 LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLK 381 (457)
Q Consensus 307 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~ 381 (457)
++.++.+||+|||+++...............+++.|+|||. .++.++||||||+++|||+| |+.||.......+.
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 269 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence 99999999999999987754433333344567889999993 37889999999999999999 99999764432222
Q ss_pred HHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 382 HWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
..+..... ... +..++..+.+++.+|++.+|.+||++.|+++.|+++.....
T Consensus 270 ~~~~~~~~--------~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 270 KLLKEGHR--------MDK---------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHHTCC--------CCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCC--------CCC---------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 22211110 000 01224568899999999999999999999999999977654
No 60
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.3e-43 Score=334.57 Aligned_cols=248 Identities=29% Similarity=0.465 Sum_probs=199.7
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchh-------hHHHHHHHHHHHhhcCCCccceeeeeeecCCee
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLER-------TFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK 244 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 244 (457)
++|...+.||+|+||.||+|+.. +++.||+|++...... ....+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 57888899999999999999874 7899999998653221 1267899999999999999999999987665
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC--eeeccCCCCCeeecCCCc-----EEEec
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP--IIHCDLKPSNILLDENMV-----AHVSD 317 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~--ivH~dlk~~NIll~~~~~-----~kl~D 317 (457)
++||||+++|+|.+++......+++..+..++.|++.||+||| ..+ |+||||||+||+++.++. +||+|
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ----NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH----TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH----hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999999999877777999999999999999999999 666 999999999999988776 99999
Q ss_pred cccccccCCCCCcceeccccccccccCCCCC------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch
Q 044428 318 FGISKLLGEGDDSLIQTKTMATIGYMAPEGI------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391 (457)
Q Consensus 318 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~ 391 (457)
||+++.... ......||+.|+|||.+ ++.++||||||+++|||++|+.||........... .....
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~-- 244 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI-NMIRE-- 244 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHH-HHHHH--
T ss_pred CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHH-HHHhc--
Confidence 999985432 23346799999999965 46689999999999999999999976543332111 10000
Q ss_pred hHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 044428 392 LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445 (457)
Q Consensus 392 ~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i 445 (457)
....+.+ +..++..+.+++.+|++.||++|||+.|+++.|+++
T Consensus 245 --~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 245 --EGLRPTI---------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --SCCCCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --cCCCCCC---------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0000111 112345689999999999999999999999999864
No 61
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-43 Score=357.48 Aligned_cols=258 Identities=20% Similarity=0.260 Sum_probs=205.1
Q ss_pred HHHHHHHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeec
Q 044428 165 YLDIQRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240 (457)
Q Consensus 165 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 240 (457)
+.++....++|+..++||+|+||+||+|+.. +++.||+|++.... ......+.+|+.++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4455556789999999999999999999986 57899999997532 2223348899999999999999999999999
Q ss_pred CCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccc
Q 044428 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI 320 (457)
Q Consensus 241 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 320 (457)
.+..++||||+++|+|.+++......+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH----~~giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH----QLHYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH----hCCeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999999886566999999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCcceeccccccccccCCCCC---------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch
Q 044428 321 SKLLGEGDDSLIQTKTMATIGYMAPEGI---------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391 (457)
Q Consensus 321 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~---------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~ 391 (457)
++....... .......||+.|+|||.+ ++.++|||||||++|||++|+.||...........+ ....
T Consensus 222 a~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i---~~~~ 297 (437)
T 4aw2_A 222 CLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI---MNHK 297 (437)
T ss_dssp CEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HTHH
T ss_pred hhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh---hhcc
Confidence 987644322 223346799999999943 578999999999999999999999764322221111 1000
Q ss_pred hHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 044428 392 LAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDE--RIHTTNAAA 440 (457)
Q Consensus 392 ~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~--RPs~~ev~~ 440 (457)
... .+..... .....+.+++.+|+..+|++ ||++.|+++
T Consensus 298 -~~~---~~p~~~~------~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 298 -ERF---QFPTQVT------DVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp -HHC---CCCSSCC------CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred -ccc---cCCcccc------cCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 000 0000000 11345789999999988888 999999875
No 62
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-42 Score=332.80 Aligned_cols=262 Identities=16% Similarity=0.133 Sum_probs=209.7
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEEEEe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 249 (457)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+|+.++..+ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 35788899999999999999986 579999999986443 234678899999999 79999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc-----EEEecccccccc
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV-----AHVSDFGISKLL 324 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~-----~kl~Dfg~~~~~ 324 (457)
|+ +++|.+++......+++..+..++.|++.||.||| ..+|+||||||+||+++.++. +||+|||+++..
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH----EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 99999999987667999999999999999999999 788999999999999987776 999999999876
Q ss_pred CCCCCc-----ceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHh
Q 044428 325 GEGDDS-----LIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEV 395 (457)
Q Consensus 325 ~~~~~~-----~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~ 395 (457)
...... .......||+.|+|||.+ ++.++||||||+++|||++|+.||...................
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---- 237 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK---- 237 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH----
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc----
Confidence 543221 112346799999999933 6789999999999999999999998754333322221111000
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 396 VDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 396 ~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
..... ......++..+.+++.+|++.+|++||++.+|++.|+++.++..
T Consensus 238 ~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 238 QSTPL------RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHSCH------HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cCccH------HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 00000 00001235568999999999999999999999999999987643
No 63
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.8e-43 Score=340.97 Aligned_cols=247 Identities=22% Similarity=0.329 Sum_probs=198.7
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch-hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
.++|+..+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 367889999999999999999876 789999999875432 234568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
|+++|+|.+++.... .+++..+..++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 999999999997654 4899999999999999999999 67899999999999999999999999999987643333
Q ss_pred cceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcH--HHHHHhhcCchhHHhccccccc
Q 044428 330 SLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSL--KHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l--~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
........||+.|+|||.+ .+.++|||||||++|||++|+.||........ ..+..... ..
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~------------~~ 228 (323)
T 3tki_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT------------YL 228 (323)
T ss_dssp ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT------------TS
T ss_pred ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc------------cC
Confidence 3333456799999999943 36689999999999999999999976443221 11111100 00
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ....+...+.+++.+|++.||++|||+.|+++
T Consensus 229 ~-----~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 229 N-----PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp T-----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C-----ccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 00112445789999999999999999999875
No 64
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.5e-42 Score=341.46 Aligned_cols=247 Identities=22% Similarity=0.256 Sum_probs=200.5
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchh------hHHHHHHHHHHHhhcCCCccceeeeeeecCCee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLER------TFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 244 (457)
.+.|...+.||+|+||.||+|+.. +|+.||+|++...... ....+.+|+.++.+++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467888999999999999999875 6899999999764321 246789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC----cEEEecccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM----VAHVSDFGI 320 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg~ 320 (457)
++||||+++|+|.+++.... .+++..+..++.||+.||.||| ..+|+||||||+|||++.++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 99999999999999997654 5899999999999999999999 67899999999999998777 799999999
Q ss_pred ccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhc
Q 044428 321 SKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396 (457)
Q Consensus 321 ~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 396 (457)
++...... ......||+.|+|||. .++.++|||||||++|||++|..||...........+......
T Consensus 166 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~------ 236 (361)
T 2yab_A 166 AHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD------ 236 (361)
T ss_dssp CEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC------
T ss_pred ceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC------
Confidence 98765432 1234679999999993 3678999999999999999999999764432222111111000
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 397 d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.........+..+.+++.+|+..||++|||+.|+++
T Consensus 237 --------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 --------FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --------CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000011122456889999999999999999999874
No 65
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=342.37 Aligned_cols=268 Identities=25% Similarity=0.423 Sum_probs=209.8
Q ss_pred hcCCcCCccCCCCceEEEEEEe-----CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCC--eeE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTL-----SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD--FKA 245 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 245 (457)
++|...+.||+|+||.||++++ .+|+.||||++..........+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 5678889999999999999984 368999999998766666778999999999999999999999886644 789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccC
Q 044428 246 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 325 (457)
+||||+++|+|.+++......+++..++.++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG----TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 999999999999999987767999999999999999999999 6789999999999999999999999999999875
Q ss_pred CCCCcc-eeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc-----hhHHh
Q 044428 326 EGDDSL-IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH-----KLAEV 395 (457)
Q Consensus 326 ~~~~~~-~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~-----~~~~~ 395 (457)
...... ......++..|+|||.+ ++.++||||||+++|||+||..|+..... ............ .+.+.
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA-EFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH-HHHHHHCTTCCTHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH-HHHHhhccccchhhhHHHHHHH
Confidence 433221 12235578889999943 67899999999999999999998753110 011111000000 01111
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 396 VDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 396 ~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
+..... ...+..++..+.+++.+||+.+|++||++.|+++.|+++++++.
T Consensus 276 ~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 276 LKNNGR-----LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp HHTTCC-----CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hhcCCC-----CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111100 00112345678999999999999999999999999999998764
No 66
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.2e-43 Score=345.00 Aligned_cols=270 Identities=24% Similarity=0.330 Sum_probs=207.3
Q ss_pred hcCCcCCccCCCCceEEEEEEe-----CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeee--cCCeeE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTL-----SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS--NLDFKA 245 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 245 (457)
++|+..+.||+|+||.||+|++ .+++.||||++..........+.+|++++++++||||+++++++. .....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788889999999999999984 368899999998776666678999999999999999999999886 456789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccC
Q 044428 246 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 325 (457)
+||||+++++|.+++......+++..++.++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG----SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 999999999999999876556999999999999999999999 6789999999999999999999999999999875
Q ss_pred CCCCcc-eeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchh---HHhcc
Q 044428 326 EGDDSL-IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKL---AEVVD 397 (457)
Q Consensus 326 ~~~~~~-~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~---~~~~d 397 (457)
...... ......+|+.|+|||.+ ++.++||||||+++|||++|+.||..........+......... .+.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 433322 22335688899999943 67899999999999999999999864211100000000000011 11111
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 398 SNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 398 ~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
...... .+..++..+.+++.+|++.||++|||+.|+++.|+.+......
T Consensus 259 ~~~~~~-----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 259 EGQRLP-----APPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp TTCCCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred cccCCC-----CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 111100 1123356789999999999999999999999999988665443
No 67
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.4e-42 Score=338.57 Aligned_cols=244 Identities=23% Similarity=0.295 Sum_probs=199.2
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|+..+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367888999999999999999875 79999999997642 33456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++|+|.+++.... .+++.....++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999999999998654 4889999999999999999999 678999999999999999999999999999864322
Q ss_pred CCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 328 DDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
.. ......||+.|+|||.+ ++.++|||||||++|||++|+.||.......+...+.. ..+. .
T Consensus 159 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~-----------~~~~-~ 224 (337)
T 1o6l_A 159 GA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----------EEIR-F 224 (337)
T ss_dssp TC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------CCCC-C
T ss_pred CC--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc-----------CCCC-C
Confidence 21 23346799999999954 67899999999999999999999976432222111111 1110 0
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERI-----HTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----s~~ev~~ 440 (457)
.. .....+.+++.+|++.||++|| ++.|+++
T Consensus 225 p~------~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 225 PR------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CT------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC------CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 00 1234588999999999999999 8888865
No 68
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.3e-43 Score=359.27 Aligned_cols=251 Identities=24% Similarity=0.403 Sum_probs=208.0
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
.++|...+.||+|+||.||+|++. ++..||||+++... .....|.+|+.++++++||||++++++|...+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 467888899999999999999986 48899999997653 2456799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 251 MPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 251 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
+++|+|.+++.... ..+++..++.++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 372 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT- 372 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-
Confidence 99999999998643 45899999999999999999999 6789999999999999999999999999999764322
Q ss_pred cceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 330 SLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
........+++.|+|||. .++.++|||||||++|||+| |+.||...........+..... ..
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~------------~~- 439 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------------ME- 439 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC------------CC-
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC------------CC-
Confidence 122233556789999994 37889999999999999999 9999976554333333222111 00
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i 445 (457)
.+..++..+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus 440 ----~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 440 ----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ----CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 1112356789999999999999999999999999875
No 69
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.9e-43 Score=336.33 Aligned_cols=256 Identities=27% Similarity=0.453 Sum_probs=192.4
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
.++|...+.||+|+||.||+|+.. ..||||+++... ......+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 457888899999999999999864 359999987543 34456799999999999999999999965 4556899999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
|+++++|.+++......+++..++.++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----hCCcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 99999999999877777999999999999999999999 67899999999999999999999999999987644333
Q ss_pred cceeccccccccccCCCCC-------CCCccchhhhhHHHHHHhcCCCCCCCCCCCc-HHHHHHhhcCchhHHhcccccc
Q 044428 330 SLIQTKTMATIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDLGEMS-LKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~~-------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~-l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
........||+.|+|||.+ ++.++||||||+++|||++|+.||....... ....+.... ..+.+.
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~ 248 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS-------LSPDLS 248 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTS-------CCCCTT
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccc-------cCcchh
Confidence 3333446799999999943 4668999999999999999999997643221 111111110 011110
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKV 447 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~ 447 (457)
.. ...++..+.+++.+|++.+|++|||+.++++.|+++.+
T Consensus 249 ~~------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 KV------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SS------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hc------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 11235668999999999999999999999999998753
No 70
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-42 Score=329.77 Aligned_cols=259 Identities=24% Similarity=0.419 Sum_probs=209.6
Q ss_pred hcCCcCC-ccCCCCceEEEEEEeC---CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 173 NEFDECN-LLGIGSFGSVYKGTLS---DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 173 ~~~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
++|...+ .||+|+||.||+|... ++..||||++.... ......+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4455555 8999999999999863 67889999998653 34456799999999999999999999999 45668999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++++|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE----EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH----HCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 9999999999999877667999999999999999999999 678999999999999999999999999999887543
Q ss_pred CCcc-eeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 328 DDSL-IQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 328 ~~~~-~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
.... ......+|+.|+|||. .++.++||||||+++|||+| |+.||...........+..... ...
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~--------~~~- 234 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR--------MEC- 234 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCC--------CCC-
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCc--------CCC-
Confidence 3221 1223457899999993 36889999999999999999 9999976554333333222110 000
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhhhh
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLDDV 453 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 453 (457)
+..++..+.+++.+|++.+|++||++.++++.|+++........
T Consensus 235 --------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 235 --------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp --------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred --------CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 01234568999999999999999999999999999987765543
No 71
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-43 Score=339.32 Aligned_cols=256 Identities=24% Similarity=0.408 Sum_probs=200.1
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCE----EEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTN----VAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~----vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
++|+..+.||+|+||.||+|+.. +++. ||+|.+.... ......+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 57888899999999999999864 4554 5777765432 334567899999999999999999999998765 789
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
|+||+++|+|.+++......+++..++.++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh----hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 99999999999999987777999999999999999999999 67899999999999999999999999999988754
Q ss_pred CCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
...........+|+.|+||| ..++.++||||||+++|||++ |+.||.......+...+.......
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---------- 239 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---------- 239 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC----------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC----------
Confidence 43333334456788999999 347889999999999999999 999998765544443333221100
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
. +..++..+.+++.+||+.||++||++.|+++.|+++.+...
T Consensus 240 -~------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 281 (327)
T 3lzb_A 240 -Q------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQ 281 (327)
T ss_dssp -C------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHH
T ss_pred -C------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcC
Confidence 0 01124468899999999999999999999999999876543
No 72
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=335.80 Aligned_cols=247 Identities=21% Similarity=0.280 Sum_probs=200.1
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchh------hHHHHHHHHHHHhhcCCCccceeeeeeecCCee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLER------TFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 244 (457)
.+.|...+.||+|+||.||+|+.. +|+.||+|++...... ....+.+|+.++++++||||+++++++...+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 357888999999999999999975 6899999999754321 356789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC----cEEEecccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM----VAHVSDFGI 320 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg~ 320 (457)
++||||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH----HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 99999999999999997653 5899999999999999999999 67899999999999999887 899999999
Q ss_pred ccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhc
Q 044428 321 SKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396 (457)
Q Consensus 321 ~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 396 (457)
++....... .....||+.|+|||. .++.++|||||||++|||++|+.||...........+.....
T Consensus 165 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~------- 234 (326)
T 2y0a_A 165 AHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY------- 234 (326)
T ss_dssp CEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC-------
T ss_pred CeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC-------
Confidence 987643321 234679999999993 367899999999999999999999975432222111111100
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 397 d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.. .......++..+.+++.+|++.||++|||+.|+++
T Consensus 235 --~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 235 --EF-----EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp --CC-----CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --Cc-----CccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 00011122456889999999999999999999986
No 73
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.4e-43 Score=337.60 Aligned_cols=264 Identities=21% Similarity=0.393 Sum_probs=202.7
Q ss_pred hcCCcCCccCCCCceEEEEEEe-----CCCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecC--Cee
Q 044428 173 NEFDECNLLGIGSFGSVYKGTL-----SDGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNL--DFK 244 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 244 (457)
+.|+..+.||+|+||.||+|++ .+++.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578888999999999999984 368999999997543 33456789999999999999999999999876 668
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
++||||+++|+|.+++......+++..++.++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG----SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh----cCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence 9999999999999999776666999999999999999999999 678999999999999999999999999999887
Q ss_pred CCCCCc-ceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcC--ch--hHHh
Q 044428 325 GEGDDS-LIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP--HK--LAEV 395 (457)
Q Consensus 325 ~~~~~~-~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~--~~--~~~~ 395 (457)
...... .......||..|+|||.+ ++.++||||||+++|||+||..|+... ...+.....+ .. ...+
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~----~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSP----MALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH----HHHHHHHHCSCCGGGHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcch----hhHHhhccCCcccccCHHHH
Confidence 544322 223346688899999943 677899999999999999999986431 1111111000 00 1111
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhH
Q 044428 396 VDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446 (457)
Q Consensus 396 ~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~ 446 (457)
......... ...+..++..+.+++.+|++.||++|||+.|+++.|+++.
T Consensus 253 ~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 253 VNTLKEGKR--LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhccCC--CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 110000000 0011123556899999999999999999999999999875
No 74
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-42 Score=333.48 Aligned_cols=270 Identities=25% Similarity=0.367 Sum_probs=201.1
Q ss_pred HHHHHHhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhc--CCCccceeeeeeecC--
Q 044428 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV--RHRNLIKILSGCSNL-- 241 (457)
Q Consensus 166 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~-- 241 (457)
..-....++|...+.||+|+||.||+|+.. |+.||||++.... ...+.+|.+++... +||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 333445678999999999999999999985 8999999986442 23445566665554 899999999998877
Q ss_pred --CeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCeeeccCCCCCeeecCCCcEEE
Q 044428 242 --DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH----ALAPIIHCDLKPSNILLDENMVAHV 315 (457)
Q Consensus 242 --~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----~~~~ivH~dlk~~NIll~~~~~~kl 315 (457)
...++||||+++|+|.+++.... +++..++.++.|++.||.|||... ..++|+||||||+||+++.++.+||
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred CCCceEEEEeccCCCcHHHHhhccC--CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 78899999999999999998764 899999999999999999999421 0128999999999999999999999
Q ss_pred eccccccccCCCCCcc--eeccccccccccCCCCC----CCC------ccchhhhhHHHHHHhcC----------CCCCC
Q 044428 316 SDFGISKLLGEGDDSL--IQTKTMATIGYMAPEGI----VST------KCDVYSYGILLLETFSR----------KKPTN 373 (457)
Q Consensus 316 ~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~----~~~------~~Dv~s~Gvvl~el~tg----------~~p~~ 373 (457)
+|||+++......... ......||+.|+|||.+ .+. ++|||||||++|||+|| +.||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 9999998764332221 11245799999999944 223 38999999999999999 55654
Q ss_pred CCC--CCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 374 DLG--EMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 374 ~~~--~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
... .......... +....+...........+++..+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 264 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 264 DLVPSDPSYEDMREI--------VCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTSCSSCCHHHHHHH--------HTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hhcCCCCchhhhHHH--------HhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 421 1111111111 0011111111111122366888999999999999999999999999999988754
No 75
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.2e-43 Score=332.09 Aligned_cols=247 Identities=23% Similarity=0.394 Sum_probs=200.6
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecC--CeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNL--DFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 248 (457)
++|...+.||+|+||.||+|+.. |+.||||++.... ......+.+|+.++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57888899999999999999985 8899999997643 33456799999999999999999999999877 7889999
Q ss_pred eccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCC--eeeccCCCCCeeecCCCcEEEeccccccccC
Q 044428 249 EFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGLALEYLHYGHALAP--IIHCDLKPSNILLDENMVAHVSDFGISKLLG 325 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~~--ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 325 (457)
||+++|+|.+++..... .+++..+..++.|++.||.||| ..+ ++||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH----TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT----TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh----cCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 99999999999987653 5899999999999999999999 566 9999999999999999999999999876532
Q ss_pred CCCCcceeccccccccccCCCCC-------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccc
Q 044428 326 EGDDSLIQTKTMATIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398 (457)
Q Consensus 326 ~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~ 398 (457)
. ....||+.|+|||.+ .+.++||||||+++|||++|+.||.............. ....+
T Consensus 165 ~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-------~~~~~ 230 (271)
T 3kmu_A 165 S-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL-------EGLRP 230 (271)
T ss_dssp C-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH-------SCCCC
T ss_pred c-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh-------cCCCC
Confidence 2 235689999999943 22379999999999999999999976442221111110 00011
Q ss_pred cccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHH
Q 044428 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKV 447 (457)
Q Consensus 399 ~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~ 447 (457)
.+. ..++..+.+++.+|++.||++|||+.|+++.|+++.+
T Consensus 231 ~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 231 TIP---------PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 110 1124568999999999999999999999999998864
No 76
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-43 Score=338.97 Aligned_cols=242 Identities=23% Similarity=0.252 Sum_probs=191.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|+..++||+|+||+||+|+.. +|+.||||++.... ......+..|+..+.++ +||||++++++|.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 368999999999999999999986 79999999986532 23334556666666665 899999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+ +++|.+++......+++..+..++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH----SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 9999 78999999887767999999999999999999999 677999999999999999999999999999876432
Q ss_pred CCcceeccccccccccCCCCC---CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 328 DDSLIQTKTMATIGYMAPEGI---VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~---~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
. ......||++|+|||.+ ++.++|||||||++|||++|..|+.... .... +.. ...
T Consensus 211 ~---~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~--~~~~-~~~-----------~~~---- 269 (311)
T 3p1a_A 211 G---AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE--GWQQ-LRQ-----------GYL---- 269 (311)
T ss_dssp -------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH--HHHH-HTT-----------TCC----
T ss_pred C---CCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--HHHH-Hhc-----------cCC----
Confidence 2 22345699999999944 6789999999999999999977764311 1111 110 000
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.......++..+.+++.+|++.||++|||+.|+++
T Consensus 270 -~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 270 -PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00011122456899999999999999999999975
No 77
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.6e-43 Score=334.19 Aligned_cols=261 Identities=23% Similarity=0.306 Sum_probs=197.8
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccch--hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLE--RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
++|...+.||+|+||.||+|+..+|+.||+|++..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46888899999999999999998899999999875432 2345788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 330 (457)
+++ +|.+++......+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH----DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR- 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-
Confidence 974 999999876667899999999999999999999 67899999999999999999999999999987643211
Q ss_pred ceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc----hhHHh-----c
Q 044428 331 LIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH----KLAEV-----V 396 (457)
Q Consensus 331 ~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~----~~~~~-----~ 396 (457)
......||+.|+|||.+ ++.++|||||||++|||++|+.||...........+...... .+... .
T Consensus 156 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 156 -KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred -ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 12335689999999932 678999999999999999999999765432222222111110 00000 0
Q ss_pred cccccccccc--hhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 397 DSNLVRREHS--FSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 397 d~~l~~~~~~--~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
++........ ..........+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1111000000 0000112456789999999999999999999875
No 78
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.4e-42 Score=333.69 Aligned_cols=261 Identities=25% Similarity=0.430 Sum_probs=197.5
Q ss_pred HHHhhcCCcCCccCCCCceEEEEEEeC----CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCC
Q 044428 169 QRATNEFDECNLLGIGSFGSVYKGTLS----DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD 242 (457)
Q Consensus 169 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 242 (457)
....++|...+.||+|+||.||+|+.. ++..||||++.... ......+.+|+.++++++||||+++++++...+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 334567888899999999999999763 34589999997542 334567899999999999999999999987755
Q ss_pred -----eeEEEEeccCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc
Q 044428 243 -----FKALVLEFMPNGSLEKWLYSH-----NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV 312 (457)
Q Consensus 243 -----~~~lv~e~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~ 312 (457)
..++||||+++|+|.+++... ...+++..++.++.|++.||.||| ..+|+||||||+||+++.++.
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS----NRNFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH----TTTCCCCCCSGGGEEECTTSC
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCc
Confidence 349999999999999999532 255899999999999999999999 778999999999999999999
Q ss_pred EEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhh
Q 044428 313 AHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQS 387 (457)
Q Consensus 313 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~ 387 (457)
+||+|||+++...............+++.|+|||. .++.++||||||+++|||++ |..||...........+...
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 265 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG 265 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC
Confidence 99999999987654333233334567889999993 36789999999999999999 88998765544433332221
Q ss_pred cCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 388 LPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 388 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
... .. +..++..+.+++.+|++.+|++||++.++++.|+++.++..
T Consensus 266 ~~~--------~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 266 HRL--------KQ---------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp CCC--------CC---------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred CCC--------CC---------CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 110 00 01224568999999999999999999999999999987654
No 79
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=343.17 Aligned_cols=243 Identities=22% Similarity=0.310 Sum_probs=193.4
Q ss_pred cCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEeccCCCC
Q 044428 177 ECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGS 255 (457)
Q Consensus 177 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 255 (457)
..+.||+|+||.||+|+.. +|+.||+|+++.........+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 3567999999999999874 789999999987655566789999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee--cCCCcEEEeccccccccCCCCCccee
Q 044428 256 LEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL--DENMVAHVSDFGISKLLGEGDDSLIQ 333 (457)
Q Consensus 256 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll--~~~~~~kl~Dfg~~~~~~~~~~~~~~ 333 (457)
|.+++......+++..+..++.|++.||.||| ..+|+||||||+|||+ +.++.+||+|||+++....... .
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~ 245 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMH----QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---L 245 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---C
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---c
Confidence 99999877666999999999999999999999 6789999999999999 5678999999999998754322 2
Q ss_pred ccccccccccCCC----CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccchhH
Q 044428 334 TKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSA 409 (457)
Q Consensus 334 ~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 409 (457)
....||+.|+||| ..++.++|||||||++|||++|+.||...........+.. ....... ..
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~-----------~~~~~~~---~~ 311 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA-----------CRWDLED---EE 311 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH-----------TCCCSCS---GG
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------ccCCCCh---hh
Confidence 3356999999999 3367799999999999999999999976442221111111 1000000 00
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 410 KMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 410 ~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.......+.+++.+|++.||++||++.|+++
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1122456889999999999999999999987
No 80
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-42 Score=337.03 Aligned_cols=264 Identities=23% Similarity=0.408 Sum_probs=206.6
Q ss_pred CCcCCccCCCCceEEEEEEeC-----CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeec--CCeeEE
Q 044428 175 FDECNLLGIGSFGSVYKGTLS-----DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSN--LDFKAL 246 (457)
Q Consensus 175 ~~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 246 (457)
|...+.||+|+||.||++.+. +|+.||||++.... ......+.+|++++++++||||+++++++.. ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 378889999999999998653 68899999998654 3345678999999999999999999999987 467899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++.... +++..++.++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH----AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH----hCCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999998765 899999999999999999999 67899999999999999999999999999998755
Q ss_pred CCCcc-eeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc------hhHHh
Q 044428 327 GDDSL-IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH------KLAEV 395 (457)
Q Consensus 327 ~~~~~-~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~------~~~~~ 395 (457)
..... ......+|..|+|||.+ ++.++||||||+++|||+||+.||..... ....+ ..... ...+.
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~-~~~~~--~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT-KFLEL--IGIAQGQMTVLRLTEL 263 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH-HHHHH--HCSCCHHHHHHHHHHH
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccch-hhhhh--hcccccchhHHHHHHH
Confidence 43321 22345688899999943 67789999999999999999999864211 00000 00010 01111
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhhh
Q 044428 396 VDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLDD 452 (457)
Q Consensus 396 ~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~~ 452 (457)
+....... .+..++..+.+++.+||+.||++|||+.|+++.|+++.+++...
T Consensus 264 ~~~~~~~~-----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 264 LERGERLP-----RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp HHTTCCCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred HhcccCCC-----CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 11111111 11233567899999999999999999999999999999988643
No 81
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.1e-42 Score=331.61 Aligned_cols=258 Identities=23% Similarity=0.386 Sum_probs=204.5
Q ss_pred hcCCcCCccCCCCceEEEEEEeCC----CCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeee-cCCeeEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSD----GTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCS-NLDFKAL 246 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~l 246 (457)
.+|...+.||+|+||.||+|+..+ ...||+|.+.... ......+.+|+.++++++||||+++++++. ..+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 467778899999999999998642 2368999987543 334567899999999999999999999864 5568899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++......+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999877667899999999999999999999 67899999999999999999999999999987643
Q ss_pred CCCc--ceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccc
Q 044428 327 GDDS--LIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSN 399 (457)
Q Consensus 327 ~~~~--~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 399 (457)
.... .......+|+.|+||| ..++.++||||||+++|||++ |.+||...................
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 252 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL-------- 252 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCC--------
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCC--------
Confidence 2211 1223456788999999 347889999999999999999 566666555444433332211100
Q ss_pred ccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 400 LVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 400 l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
. +..++..+.+++.+|++.+|++||++.|+++.|+++..++..
T Consensus 253 ---~------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 253 ---Q------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp ---C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred ---C------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 0 011244688999999999999999999999999999887654
No 82
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-43 Score=336.75 Aligned_cols=245 Identities=24% Similarity=0.333 Sum_probs=191.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch--------------------------hhHHHHHHHHHHHh
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE--------------------------RTFVSFNSECEVLR 224 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--------------------------~~~~~~~~E~~~l~ 224 (457)
.++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357888999999999999999874 789999999865421 11356889999999
Q ss_pred hcCCCccceeeeeeec--CCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCC
Q 044428 225 NVRHRNLIKILSGCSN--LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKP 302 (457)
Q Consensus 225 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~ 302 (457)
+++||||+++++++.. .+..++||||+++++|.+++... .+++..+..++.|++.||+||| ..+|+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLH----YQKIIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCH
Confidence 9999999999999976 56889999999999998876543 4899999999999999999999 67899999999
Q ss_pred CCeeecCCCcEEEeccccccccCCCCCcceeccccccccccCCCCCC-------CCccchhhhhHHHHHHhcCCCCCCCC
Q 044428 303 SNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV-------STKCDVYSYGILLLETFSRKKPTNDL 375 (457)
Q Consensus 303 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~Dv~s~Gvvl~el~tg~~p~~~~ 375 (457)
+||+++.++.+||+|||+++....... ......||+.|+|||.+. +.++|||||||++|||++|+.||...
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 999999999999999999987654322 234467999999999552 56789999999999999999999754
Q ss_pred CCCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 376 GEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 376 ~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
....+...+... ... ... ...++..+.+++.+|++.||++||++.|+++
T Consensus 244 ~~~~~~~~~~~~-----------~~~-~~~----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 244 RIMCLHSKIKSQ-----------ALE-FPD----QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SHHHHHHHHHHC-----------CCC-CCS----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cHHHHHHHHhcc-----------cCC-CCC----ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 322111111110 000 000 0012446889999999999999999999864
No 83
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-42 Score=344.01 Aligned_cols=248 Identities=22% Similarity=0.302 Sum_probs=202.7
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
.++|...+.||+|+||.||+|... +|+.||+|++..........+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467899999999999999999875 7899999999876555556789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC--CCcEEEeccccccccCCCC
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE--NMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~--~~~~kl~Dfg~~~~~~~~~ 328 (457)
+++|+|.+++......+++..+..++.|++.||.||| ..+|+||||||+|||++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH----EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 9999999999877667999999999999999999999 678999999999999974 5789999999999865432
Q ss_pred CcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
. .....||+.|+|||.+ ++.++|||||||++|||++|+.||...........+.... ......
T Consensus 206 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~---------~~~~~~- 272 (387)
T 1kob_A 206 I---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD---------WEFDED- 272 (387)
T ss_dssp C---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC---------CCCCSS-
T ss_pred c---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CCCCcc-
Confidence 2 2335799999999943 6778999999999999999999997644322222111100 000000
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
....++..+.+++.+|++.||++|||+.|+++
T Consensus 273 ----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 273 ----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 00112456889999999999999999999986
No 84
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.8e-43 Score=331.26 Aligned_cols=249 Identities=28% Similarity=0.453 Sum_probs=189.2
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccch----hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLE----RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|+..+.||+|+||.||+|+.. |+.||||++..... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888899999999999999985 88999999875432 23467899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC--------CCcEEEecccc
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE--------NMVAHVSDFGI 320 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~--------~~~~kl~Dfg~ 320 (457)
||+++++|.+++... .+++..+..++.|++.||.|||... ..+++||||||+||+++. ++.+||+|||+
T Consensus 86 e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~-~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEA-IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp ECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSS-SSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC-CCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 999999999999754 4899999999999999999999533 223999999999999986 77899999999
Q ss_pred ccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhc
Q 044428 321 SKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396 (457)
Q Consensus 321 ~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 396 (457)
++...... .....||+.|+||| ..++.++||||||+++|||++|+.||.............
T Consensus 163 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----------- 227 (271)
T 3dtc_A 163 AREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA----------- 227 (271)
T ss_dssp -----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH-----------
T ss_pred cccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhh-----------
Confidence 98754322 12356899999999 347889999999999999999999997643221111111
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 044428 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445 (457)
Q Consensus 397 d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i 445 (457)
........ +..++..+.+++.+|++.+|++|||+.|+++.|++|
T Consensus 228 ~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 228 MNKLALPI-----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TSCCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cCCCCCCC-----CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00000000 112245689999999999999999999999999764
No 85
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.2e-42 Score=327.53 Aligned_cols=255 Identities=23% Similarity=0.343 Sum_probs=204.1
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCC----CCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSD----GTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
.++|...+.||+|+||.||+|+..+ +..||+|++.... ......+.+|+.++++++||||+++++++.+. ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4678888999999999999998642 3469999997653 33456799999999999999999999998754 5689
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++++|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++....
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 99999999999999877666899999999999999999999 67899999999999999999999999999987643
Q ss_pred CCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
... .......+++.|+||| ..++.++||||||+++|||+| |+.||...........+.......
T Consensus 166 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~---------- 234 (281)
T 3cc6_A 166 EDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP---------- 234 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC----------
T ss_pred ccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC----------
Confidence 221 1223356788999999 447889999999999999998 999997655444333322211100
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
. +..++..+.+++.+|++.+|++||++.|+++.|+++.+.-
T Consensus 235 -~------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 235 -K------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp -C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -C------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 0 0112446889999999999999999999999999987653
No 86
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-43 Score=345.37 Aligned_cols=258 Identities=23% Similarity=0.405 Sum_probs=197.9
Q ss_pred cCCcCCccCCCCceEEEEEEeC--CC--CEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeec-CCeeEEE
Q 044428 174 EFDECNLLGIGSFGSVYKGTLS--DG--TNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSN-LDFKALV 247 (457)
Q Consensus 174 ~~~~~~~lg~G~~g~Vy~~~~~--~g--~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv 247 (457)
.|...+.||+|+||.||+|++. ++ ..||||.++... ......|.+|+.++++++||||++++++|.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4556678999999999999863 22 468999987543 3445679999999999999999999998754 5678999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++|+|.+++......+++..++.++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH----HCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999877667899999999999999999999 678999999999999999999999999999876432
Q ss_pred CCc--ceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccc
Q 044428 328 DDS--LIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 328 ~~~--~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 400 (457)
... .......+|+.|+||| ..++.++||||||+++|||+| |..||...........+......
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~---------- 315 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL---------- 315 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCC----------
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCC----------
Confidence 211 1123356788999999 447889999999999999999 67788765555544433321110
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhhh
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLDD 452 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~~ 452 (457)
. . +..++..+.+++.+||+.+|++||++.|+++.|+++...+..+
T Consensus 316 ~-~------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 316 L-Q------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp C-C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred C-C------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 0 0 1123456899999999999999999999999999998776543
No 87
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.8e-43 Score=357.45 Aligned_cols=252 Identities=27% Similarity=0.446 Sum_probs=200.0
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
..++|...+.||+|+||.||+|++.++..||||+++... .....|.+|++++++++||||+++++++.. +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 346788889999999999999999888889999998653 234679999999999999999999999876 678999999
Q ss_pred cCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 251 MPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 251 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
+++|+|.+++.... ..+++..++.++.|++.||+||| ..+|+||||||+|||+++++.+||+|||+++.......
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 99999999997532 45899999999999999999999 67899999999999999999999999999987643221
Q ss_pred cceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 330 SLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
.......+++.|+||| ..++.++|||||||++|||+| |+.||...........+..... +
T Consensus 336 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~----------~---- 400 (452)
T 1fmk_A 336 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR----------M---- 400 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC----------C----
T ss_pred -ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----------C----
Confidence 1223355788999999 447889999999999999999 9999975432222222111100 0
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~ 446 (457)
..+..++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus 401 ---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 401 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred ---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 011134567899999999999999999999999998764
No 88
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.5e-42 Score=338.06 Aligned_cols=262 Identities=23% Similarity=0.355 Sum_probs=210.3
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEeCC-C-----CEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCccceeeeeeecC
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTLSD-G-----TNVAIKIFNLQL-ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNL 241 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-g-----~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 241 (457)
...++|...+.||+|+||.||+|+... + ..||+|.+.... ......+.+|+.+++++ +||||+++++++...
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 345688889999999999999998642 2 479999997653 33456789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCCHHHHHhhC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec
Q 044428 242 DFKALVLEFMPNGSLEKWLYSH-------------NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD 308 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~ 308 (457)
+..++||||+++|+|.+++... ...+++..++.++.|++.||.||| ..+|+||||||+||+++
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA----SKNCIHRDVAARNVLLT 198 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGCEEE
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh----cCCcccCCcccceEEEC
Confidence 9999999999999999999753 234789999999999999999999 67899999999999999
Q ss_pred CCCcEEEeccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcH-HH
Q 044428 309 ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSL-KH 382 (457)
Q Consensus 309 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l-~~ 382 (457)
.++.+||+|||+++...............+|+.|+||| ..++.++||||||+++|||+| |..||........ ..
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 278 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH
Confidence 99999999999998765433333334456788999999 447889999999999999999 9999976432221 11
Q ss_pred HHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhhh
Q 044428 383 WVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLDD 452 (457)
Q Consensus 383 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~~ 452 (457)
.+.... .. .. +..++..+.+++.+|++.+|.+|||+.|+++.|+++.++..++
T Consensus 279 ~~~~~~--------~~----~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~ 331 (333)
T 2i1m_A 279 LVKDGY--------QM----AQ-----PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRE 331 (333)
T ss_dssp HHHHTC--------CC----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCC--------CC----CC-----CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhcc
Confidence 111111 00 00 0012456889999999999999999999999999998876543
No 89
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=343.56 Aligned_cols=244 Identities=25% Similarity=0.333 Sum_probs=199.9
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|...+.||+|+||.||+++.. +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 67888999999999999999875 68899999997542 234567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++.+....
T Consensus 95 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ----NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp CCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999998754 4899999999999999999999 6789999999999999999999999999998764332
Q ss_pred CcceeccccccccccCCCCC-------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
......||+.|+|||.+ ++.++|||||||++|||++|+.||................ ....
T Consensus 170 ---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~---------~~~~ 237 (384)
T 4fr4_A 170 ---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE---------TTVV 237 (384)
T ss_dssp ---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH---------HCCC
T ss_pred ---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh---------hccc
Confidence 23446799999999955 5778999999999999999999997654443333222110 0000
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCC-HHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIH-TTNAA 439 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs-~~ev~ 439 (457)
.... .+...+.+++.+|++.||++||+ +.++.
T Consensus 238 ~~p~------~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 238 TYPS------AWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp CCCT------TSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred CCCC------cCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 0110 12446889999999999999998 55554
No 90
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-42 Score=333.42 Aligned_cols=266 Identities=23% Similarity=0.295 Sum_probs=204.4
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCC--eeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD--FKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 248 (457)
++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 57888899999999999999976 58999999997543 334567889999999999999999999987655 779999
Q ss_pred eccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee----cCCCcEEEecccccc
Q 044428 249 EFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL----DENMVAHVSDFGISK 322 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll----~~~~~~kl~Dfg~~~ 322 (457)
||+++|+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR----ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 9999999999998654 33899999999999999999999 6789999999999999 788899999999998
Q ss_pred ccCCCCCcceeccccccccccCCCC------------CCCCccchhhhhHHHHHHhcCCCCCCCCCCC-cHHHHHH---h
Q 044428 323 LLGEGDDSLIQTKTMATIGYMAPEG------------IVSTKCDVYSYGILLLETFSRKKPTNDLGEM-SLKHWVN---Q 386 (457)
Q Consensus 323 ~~~~~~~~~~~~~~~gt~~y~aPE~------------~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~-~l~~~~~---~ 386 (457)
....... .....||+.|+|||. .++.++|||||||++|||+||+.||...... .....+. .
T Consensus 165 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp ECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 7654322 234569999999993 3577999999999999999999999753221 1111111 1
Q ss_pred hcCch-hHHh---cccccc---ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 044428 387 SLPHK-LAEV---VDSNLV---RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKI 445 (457)
Q Consensus 387 ~~~~~-~~~~---~d~~l~---~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i 445 (457)
..+.. +..+ ....+. ...............+.+++.+|++.||++|||+.|+++...+.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 11111 0000 000000 00000111234567789999999999999999999999887653
No 91
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.4e-43 Score=341.93 Aligned_cols=266 Identities=23% Similarity=0.384 Sum_probs=211.7
Q ss_pred HHHHHHhhcCCcCCccCCCCceEEEEEEeC------CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeee
Q 044428 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLS------DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGC 238 (457)
Q Consensus 166 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 238 (457)
.+.....++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455678999999999999999999764 37889999997543 23445789999999999999999999999
Q ss_pred ecCCeeEEEEeccCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC
Q 044428 239 SNLDFKALVLEFMPNGSLEKWLYSHN---------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE 309 (457)
Q Consensus 239 ~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~ 309 (457)
...+..++||||+++|+|.+++.... ..+++..++.++.|++.||.||| ..+|+||||||+||+++.
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN----ANKFVHRDLAARNCMVAE 173 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCSGGGEEECT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCCccCCCccceEEEcC
Confidence 99999999999999999999997532 34689999999999999999999 678999999999999999
Q ss_pred CCcEEEeccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHH
Q 044428 310 NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWV 384 (457)
Q Consensus 310 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~ 384 (457)
++.+||+|||+++...............+|+.|+||| ..++.++||||||+++|||+| |+.||...........+
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 253 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHH
Confidence 9999999999998764332222223355788999999 347889999999999999999 89998764432222221
Q ss_pred HhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhhh
Q 044428 385 NQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLDD 452 (457)
Q Consensus 385 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~~ 452 (457)
.. ....... ..++..+.+++.+|++.+|++|||+.|+++.|+++.+.+..+
T Consensus 254 ~~-----------~~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~ 304 (322)
T 1p4o_A 254 ME-----------GGLLDKP------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 304 (322)
T ss_dssp HT-----------TCCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred Hc-----------CCcCCCC------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcc
Confidence 11 1111111 122456889999999999999999999999998876554443
No 92
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.4e-42 Score=346.88 Aligned_cols=250 Identities=20% Similarity=0.285 Sum_probs=201.1
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
...++|+..+.||+|+||.||+|... +|+.+|+|++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 45678999999999999999999864 78999999987543 3345678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec---CCCcEEEeccccccc
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKL 323 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~---~~~~~kl~Dfg~~~~ 323 (457)
||||+++|+|.+++.... .+++.....++.|++.||.||| ..+|+||||||+|||++ .++.+||+|||+++.
T Consensus 88 v~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH----~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH----QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp EECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 999999999999998764 4899999999999999999999 67899999999999998 467899999999987
Q ss_pred cCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccc
Q 044428 324 LGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSN 399 (457)
Q Consensus 324 ~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 399 (457)
...... ......||+.|+|||. .++.++||||+||++|||++|+.||.......+...+......
T Consensus 163 ~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--------- 231 (444)
T 3soa_A 163 VEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--------- 231 (444)
T ss_dssp CCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC---------
T ss_pred ecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC---------
Confidence 644322 2234679999999993 3788999999999999999999999765433222222111100
Q ss_pred ccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 400 LVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 400 l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
... .....++..+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~-----~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 232 FPS-----PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CCT-----TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCc-----cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 001122456889999999999999999999986
No 93
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.1e-42 Score=339.77 Aligned_cols=249 Identities=21% Similarity=0.333 Sum_probs=201.2
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
..++|...+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4578999999999999999999875 68999999997542 33456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCC---CcEEEecccccccc
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDEN---MVAHVSDFGISKLL 324 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfg~~~~~ 324 (457)
|||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++.+ +.+||+|||+++..
T Consensus 107 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 99999999999998654 4899999999999999999999 6789999999999999865 45999999999876
Q ss_pred CCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccc
Q 044428 325 GEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 400 (457)
.... ......||+.|+|||. .++.++|||||||++|||++|+.||.......+...+...... .
T Consensus 182 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~---------~ 249 (362)
T 2bdw_A 182 NDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD---------Y 249 (362)
T ss_dssp TTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---------C
T ss_pred cCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC---------C
Confidence 5322 1234679999999993 3778999999999999999999999765432222222111100 0
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
.......++..+.+++.+|++.||++||++.|+++.
T Consensus 250 -----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 -----PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -----CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -----CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000011224568899999999999999999998753
No 94
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=341.45 Aligned_cols=239 Identities=23% Similarity=0.282 Sum_probs=191.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (457)
.++|+..+.||+|+||.||+|+.. +|+.||||+++... ......+.+|.+++..+ +||||+++++++...+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999875 68999999997642 33455678999999988 69999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++.... .+++..+..++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH----DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999998754 4899999999999999999999 67899999999999999999999999999986432
Q ss_pred CCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
.. .......||+.|+|||.+ ++.++|||||||++|||++|+.||.......+...+. .....-
T Consensus 177 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~-----------~~~~~~ 243 (353)
T 3txo_A 177 NG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL-----------NDEVVY 243 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-----------HCCCCC
T ss_pred CC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH-----------cCCCCC
Confidence 21 223346799999999944 7889999999999999999999997654322221111 111100
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHT 435 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~ 435 (457)
.. .....+.+++.+|++.||++||++
T Consensus 244 -p~------~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 244 -PT------WLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp -CT------TSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred -CC------CCCHHHHHHHHHHhhhCHHHccCC
Confidence 00 113457899999999999999998
No 95
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-42 Score=336.60 Aligned_cols=257 Identities=27% Similarity=0.473 Sum_probs=199.7
Q ss_pred hcCCcCCccCCCCceEEEEEEeCC-----CCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSD-----GTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
++|...+.||+|+||.||+|+... +..||||++.... ......+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 355667899999999999998642 2469999997653 3345578999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++......+++..++.++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA----NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 99999999999999887667999999999999999999999 67899999999999999999999999999987644
Q ss_pred CCCcc-eeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccc
Q 044428 327 GDDSL-IQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 327 ~~~~~-~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 400 (457)
..... ......+|+.|+|||. .++.++||||||+++|||++ |+.||...........+.... . .
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~--------~--~ 269 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF--------R--L 269 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC--------C--C
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCC--------c--C
Confidence 32211 1223456889999993 36789999999999999999 999997644322222111110 0 0
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
. .+..++..+.+++.+||+.+|++||++.++++.|+++.+...
T Consensus 270 ~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 270 P-------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp C-------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred C-------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 0 011234568999999999999999999999999999876543
No 96
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.4e-43 Score=341.51 Aligned_cols=273 Identities=25% Similarity=0.392 Sum_probs=196.6
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHH--HHHhhcCCCccceeeeeee-----cCCee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSEC--EVLRNVRHRNLIKILSGCS-----NLDFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~--~~l~~l~h~niv~l~~~~~-----~~~~~ 244 (457)
.++|...+.||+|+||.||+|+. +++.||||++..... ..+..|. ..+..++||||+++++++. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 36788889999999999999987 689999999975432 2334444 4455689999999997543 23467
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC---------CeeeccCCCCCeeecCCCcEEE
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALA---------PIIHCDLKPSNILLDENMVAHV 315 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~---------~ivH~dlk~~NIll~~~~~~kl 315 (457)
++||||+++|+|.+++.... .++..+..++.|++.||.||| .. +|+||||||+|||++.++.+||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH----~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH----TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH----CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH----hhhccccccccceeecccccceEEEcCCCcEEE
Confidence 89999999999999998765 589999999999999999999 55 8999999999999999999999
Q ss_pred eccccccccCCCCC------cceeccccccccccCCCCCC-----------CCccchhhhhHHHHHHhcCCCCCCCCCCC
Q 044428 316 SDFGISKLLGEGDD------SLIQTKTMATIGYMAPEGIV-----------STKCDVYSYGILLLETFSRKKPTNDLGEM 378 (457)
Q Consensus 316 ~Dfg~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~-----------~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~ 378 (457)
+|||+++.+..... ........||+.|+|||.+. +.++|||||||++|||++|..|+......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987643211 11222456999999999543 35799999999999999998776442111
Q ss_pred c-----HHHHHHhhcCc-hhHHhcccccccc--ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 379 S-----LKHWVNQSLPH-KLAEVVDSNLVRR--EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 379 ~-----l~~~~~~~~~~-~~~~~~d~~l~~~--~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
. ........... .....+....... .........++..+.+++.+||+.||++|||+.|+++.|+++...|.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 0 00000000000 0011111000000 00011112356679999999999999999999999999999998887
Q ss_pred hhhh
Q 044428 451 DDVA 454 (457)
Q Consensus 451 ~~~~ 454 (457)
++-.
T Consensus 322 ~~~~ 325 (336)
T 3g2f_A 322 RNKS 325 (336)
T ss_dssp C---
T ss_pred hccc
Confidence 6543
No 97
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2e-42 Score=334.37 Aligned_cols=266 Identities=23% Similarity=0.359 Sum_probs=212.0
Q ss_pred CHHHHHHHhhcCCcCCccCCCCceEEEEEEe------CCCCEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCccceee
Q 044428 164 SYLDIQRATNEFDECNLLGIGSFGSVYKGTL------SDGTNVAIKIFNLQL-ERTFVSFNSECEVLRNV-RHRNLIKIL 235 (457)
Q Consensus 164 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~ 235 (457)
.........++|...+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3344445568899999999999999999974 357899999997653 33456789999999999 799999999
Q ss_pred eeeecCC-eeEEEEeccCCCCHHHHHhhCCC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeecc
Q 044428 236 SGCSNLD-FKALVLEFMPNGSLEKWLYSHNY---------------FLDILERLNIMIDVGLALEYLHYGHALAPIIHCD 299 (457)
Q Consensus 236 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~---------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~d 299 (457)
+++...+ ..++||||+++|+|.+++..... .+++..+..++.|++.||.||| ..+|+|||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~d 173 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRD 173 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH----HTTCCCSC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH----hCCccccc
Confidence 9987654 58999999999999999987542 2789999999999999999999 67899999
Q ss_pred CCCCCeeecCCCcEEEeccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCC
Q 044428 300 LKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTND 374 (457)
Q Consensus 300 lk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~ 374 (457)
|||+||+++.++.+||+|||+++...............+|+.|+||| ..++.++||||||+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 99999999999999999999998765544333344566889999999 347889999999999999998 9999976
Q ss_pred CCCCc-HHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 375 LGEMS-LKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 375 ~~~~~-l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
..... ....+.... ..... ..++..+.+++.+|++.+|.+|||+.|+++.|+++.+...
T Consensus 254 ~~~~~~~~~~~~~~~--------~~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 254 VKIDEEFCRRLKEGT--------RMRAP---------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp CCCSHHHHHHHHHTC--------CCCCC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred cchhHHHHHHhccCc--------cCCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 43221 111111110 00000 0124468899999999999999999999999999987653
No 98
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-43 Score=350.33 Aligned_cols=257 Identities=19% Similarity=0.262 Sum_probs=203.1
Q ss_pred HHHHHHHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeec
Q 044428 165 YLDIQRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240 (457)
Q Consensus 165 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 240 (457)
+.+.....++|+..+.||+|+||.||+++.. +|+.||||+++... ......+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 4445556789999999999999999999985 79999999997532 2234458899999999999999999999999
Q ss_pred CCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccc
Q 044428 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI 320 (457)
Q Consensus 241 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 320 (457)
.+..++||||+++|+|.+++...+..+++..+..++.||+.||+||| ..+|+||||||+|||++.++++||+|||+
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH----RLGYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecccCHHHeeecCCCCEEEeechh
Confidence 99999999999999999999876556899999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCcceeccccccccccCCCCC-----------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcC
Q 044428 321 SKLLGEGDDSLIQTKTMATIGYMAPEGI-----------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP 389 (457)
Q Consensus 321 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~ 389 (457)
++....... .......||+.|+|||.+ ++.++|||||||++|||++|+.||...........+. .
T Consensus 209 a~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~---~ 284 (412)
T 2vd5_A 209 CLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV---H 284 (412)
T ss_dssp CEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---T
T ss_pred heeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHH---h
Confidence 987654322 222346799999999943 5789999999999999999999997643222111111 0
Q ss_pred chhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCC---CCHHHHHH
Q 044428 390 HKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER---IHTTNAAA 440 (457)
Q Consensus 390 ~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~R---Ps~~ev~~ 440 (457)
.. .....+.. ....+..+.+++.+|+. +|++| |++.|+.+
T Consensus 285 ~~-~~~~~p~~---------~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 285 YK-EHLSLPLV---------DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HH-HHCCCC-------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cc-cCcCCCcc---------ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 00 00000000 01124568899999999 99998 58888753
No 99
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4e-42 Score=332.97 Aligned_cols=262 Identities=24% Similarity=0.350 Sum_probs=186.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch-hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE-RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
.++|+..+.||+|+||.||+|+.. +|+.||+|++..... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467889999999999999999875 689999999975532 234578899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 250 FMPNGSLEKWLYSHN-----YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
|++ |+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH----ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 997 69999987532 35889999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCCcceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc---h-hHHh
Q 044428 325 GEGDDSLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH---K-LAEV 395 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~---~-~~~~ 395 (457)
..... ......||+.|+|||. .++.++|||||||++|||++|+.||...........+...... . +..+
T Consensus 159 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 159 GIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp TSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred CCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence 43221 2234578999999993 3678999999999999999999999765433333222221110 0 0000
Q ss_pred c-----ccccccccc-chh------HHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 396 V-----DSNLVRREH-SFS------AKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 396 ~-----d~~l~~~~~-~~~------~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. .+.+..... ... ........+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 000000000 000 00012346899999999999999999999875
No 100
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=334.42 Aligned_cols=252 Identities=27% Similarity=0.422 Sum_probs=195.7
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEeccC
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMP 252 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 252 (457)
++|+..+.||+|+||.||+|+.. ++.||||++... .....|.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 56788889999999999999985 788999998643 345678999999999999999999998874 4799999999
Q ss_pred CCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc-EEEeccccccccCCCCC
Q 044428 253 NGSLEKWLYSHN--YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV-AHVSDFGISKLLGEGDD 329 (457)
Q Consensus 253 ~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~-~kl~Dfg~~~~~~~~~~ 329 (457)
+|+|.+++.... ..+++..++.++.|++.||.|||+.+ ..+|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ-PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCS-SSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCC-CCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 999999998765 24788999999999999999999533 278999999999999998886 799999999865322
Q ss_pred cceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccccc
Q 044428 330 SLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 405 (457)
.....||+.|+|||. .++.++||||||+++|||+||+.||........... .... ....+...
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~-----~~~~~~~~---- 226 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM-WAVH-----NGTRPPLI---- 226 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH-HHHH-----TTCCCCCB----
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH-HHHh-----cCCCCCcc----
Confidence 123468999999993 367899999999999999999999976443221111 1000 00000010
Q ss_pred chhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 406 SFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 406 ~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
..++..+.+++.+|++.+|++|||+.++++.|+.+.+.+.
T Consensus 227 -----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 227 -----KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp -----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred -----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 1124568899999999999999999999999999876654
No 101
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.2e-42 Score=327.73 Aligned_cols=256 Identities=24% Similarity=0.393 Sum_probs=211.5
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
..++|...+.||+|+||.||+|... ++..||+|++.... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4567888899999999999999976 58899999997543 345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 250 FMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
|+++++|.+++.... ..+++..+..++.+++.||.||| ..+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH----HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH----HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 999999999998743 45899999999999999999999 6679999999999999999999999999998765432
Q ss_pred CcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 329 DSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
........+|+.|+||| ..++.++||||||+++|||++ |..||...........+.......
T Consensus 166 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~------------ 232 (288)
T 3kfa_A 166 -YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME------------ 232 (288)
T ss_dssp -SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC------------
T ss_pred -cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCC------------
Confidence 22333456788999999 447889999999999999999 999997655444333332221110
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
. +..++..+.+++.+|++.||++|||+.++++.|+++.++.
T Consensus 233 ~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 233 R-----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred C-----CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 0 0122456899999999999999999999999999876654
No 102
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.6e-43 Score=351.09 Aligned_cols=254 Identities=20% Similarity=0.290 Sum_probs=202.7
Q ss_pred HHHHHHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecC
Q 044428 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNL 241 (457)
Q Consensus 166 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 241 (457)
.++....++|...+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 345556789999999999999999999975 68999999997532 22234588999999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccc
Q 044428 242 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS 321 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 321 (457)
+..++||||+++|+|.+++.... +++.....++.|++.||+||| ..+|+||||||+|||++.++.+||+|||++
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~~--~~e~~~~~~~~qi~~aL~~LH----~~givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEeCCCCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeeECCCCCEEEecccee
Confidence 99999999999999999998754 889999999999999999999 678999999999999999999999999999
Q ss_pred cccCCCCCcceeccccccccccCCCCC--------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhH
Q 044428 322 KLLGEGDDSLIQTKTMATIGYMAPEGI--------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLA 393 (457)
Q Consensus 322 ~~~~~~~~~~~~~~~~gt~~y~aPE~~--------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~ 393 (457)
+...... ........||+.|+|||.+ ++.++|||||||++|||++|+.||...........+ .... .
T Consensus 216 ~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i---~~~~-~ 290 (410)
T 3v8s_A 216 MKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI---MNHK-N 290 (410)
T ss_dssp EECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HTHH-H
T ss_pred EeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHH---Hhcc-c
Confidence 8764432 1223357899999999943 567999999999999999999999764322211111 1000 0
Q ss_pred HhccccccccccchhHHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 044428 394 EVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDE--RIHTTNAAA 440 (457)
Q Consensus 394 ~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~--RPs~~ev~~ 440 (457)
.. ..... ......+.+++.+|++.+|++ ||++.||.+
T Consensus 291 ~~---~~p~~-------~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 291 SL---TFPDD-------NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HC---CCCTT-------CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred cc---cCCCc-------ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 00 00000 011345889999999999998 999999875
No 103
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.8e-42 Score=337.83 Aligned_cols=248 Identities=23% Similarity=0.334 Sum_probs=197.6
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-----hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-----ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKA 245 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (457)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 357899999999999999999875 78999999986432 113567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc---EEEeccc
Q 044428 246 LVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV---AHVSDFG 319 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfg 319 (457)
+||||+++|+|.+++... ...+++..+..++.|++.||.||| ..+|+||||||+|||++.++. +||+|||
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH----DNNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 999999999999888643 245899999999999999999999 678999999999999986654 9999999
Q ss_pred cccccCCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHh
Q 044428 320 ISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEV 395 (457)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~ 395 (457)
+++...... .......||+.|+|||.+ ++.++|||||||++|||++|+.||..... .... .+
T Consensus 179 ~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~--------~i 244 (351)
T 3c0i_A 179 VAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----RLFE--------GI 244 (351)
T ss_dssp TCEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----HHHH--------HH
T ss_pred ceeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----HHHH--------HH
Confidence 998765432 123346799999999933 68899999999999999999999975321 1111 11
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 396 VDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 396 ~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
...... .........+..+.+++.+|++.||++|||+.|+++
T Consensus 245 ~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 245 IKGKYK---MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHTCCC---CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HcCCCC---CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 110000 000011123456889999999999999999999985
No 104
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.2e-42 Score=332.90 Aligned_cols=247 Identities=23% Similarity=0.354 Sum_probs=192.9
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCC------
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD------ 242 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 242 (457)
..++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4568899999999999999999986 89999999997543 334567999999999999999999999885543
Q ss_pred ---------------------------------------------------eeEEEEeccCCCCHHHHHhhCC--CCCCH
Q 044428 243 ---------------------------------------------------FKALVLEFMPNGSLEKWLYSHN--YFLDI 269 (457)
Q Consensus 243 ---------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~--~~l~~ 269 (457)
..++||||+++|+|.+++.... ...++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 3799999999999999998764 33567
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc----------ceecccccc
Q 044428 270 LERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS----------LIQTKTMAT 339 (457)
Q Consensus 270 ~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~gt 339 (457)
..++.++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++........ .......||
T Consensus 164 ~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred HHHHHHHHHHHHHHHHHH----hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 778999999999999999 678999999999999999999999999999987543221 112335799
Q ss_pred ccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHH
Q 044428 340 IGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLL 415 (457)
Q Consensus 340 ~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 415 (457)
+.|+|||. .++.++||||||+++|||++|..|+.. ...... ....... .........
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~--------~~~~~~~------~~~~~~~~~ 300 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIIT--------DVRNLKF------PLLFTQKYP 300 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHH--------HHHTTCC------CHHHHHHCH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHH--------HhhccCC------CcccccCCh
Confidence 99999993 478899999999999999998776421 000000 1101000 011223345
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 416 RIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 416 ~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+.+++.+|++.||++|||+.|+++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhh
Confidence 6789999999999999999999975
No 105
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-42 Score=328.91 Aligned_cols=257 Identities=22% Similarity=0.359 Sum_probs=203.9
Q ss_pred cCCcCCccCCCCceEEEEEEeC-CC---CEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCee-EEE
Q 044428 174 EFDECNLLGIGSFGSVYKGTLS-DG---TNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK-ALV 247 (457)
Q Consensus 174 ~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 247 (457)
.|...+.||+|+||.||+|+.. ++ ..||+|++.... ......+.+|+.++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4555678999999999999853 22 379999987543 33456789999999999999999999999876655 999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+.+|+|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA----EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999886667899999999999999999999 678999999999999999999999999999865432
Q ss_pred CCc--ceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCC-CCCCCCCcHHHHHHhhcCchhHHhccccc
Q 044428 328 DDS--LIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKP-TNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 328 ~~~--~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p-~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 400 (457)
... .......+++.|+|||. .++.++||||||+++|||++|..| |...........+.......
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--------- 248 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP--------- 248 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---------
Confidence 211 12233567899999993 367899999999999999995555 44444433333333221110
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
. +..++..+.+++.+|++.+|++|||+.++++.|+++.++...
T Consensus 249 --~------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 249 --Q------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp --C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred --C------CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 0 011244688999999999999999999999999999887654
No 106
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=360.88 Aligned_cols=250 Identities=24% Similarity=0.433 Sum_probs=200.4
Q ss_pred ccCCCCceEEEEEEeC---CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEeccCCCC
Q 044428 180 LLGIGSFGSVYKGTLS---DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPNGS 255 (457)
Q Consensus 180 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 255 (457)
.||+|+||.||+|.+. ++..||||+++... ......|.+|++++++++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999864 56789999998653 3356789999999999999999999999976 56899999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCcc-eec
Q 044428 256 LEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSL-IQT 334 (457)
Q Consensus 256 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~-~~~ 334 (457)
|.+++......+++..+..++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++.+....... ...
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH----~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE----EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 99999877667999999999999999999999 6789999999999999999999999999998764432211 122
Q ss_pred cccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccchhH
Q 044428 335 KTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSA 409 (457)
Q Consensus 335 ~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 409 (457)
...+++.|+||| ..++.++|||||||++|||+| |+.||...........+..... + ..
T Consensus 498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~----------~-------~~ 560 (613)
T 2ozo_A 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR----------M-------EC 560 (613)
T ss_dssp ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCC----------C-------CC
T ss_pred CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC----------C-------CC
Confidence 344678999999 447889999999999999998 9999987554433333322110 0 00
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 410 KMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 410 ~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
+..++..+.+++.+||+.+|++||++.+|++.|+.+......
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 113456789999999999999999999999999988766543
No 107
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=9e-42 Score=330.37 Aligned_cols=241 Identities=26% Similarity=0.343 Sum_probs=198.1
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|+..+.||+|+||.||+++.. +|+.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 367888999999999999999875 79999999997642 23455688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++|+|.+++.... .+++.....++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH----SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 99999999999998754 4889999999999999999999 788999999999999999999999999999875432
Q ss_pred CCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 328 DDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
.....||+.|+|||.+ ++.++|||||||++|||++|+.||.......... .+....+. .
T Consensus 160 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-----------~i~~~~~~-~ 222 (318)
T 1fot_A 160 -----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE-----------KILNAELR-F 222 (318)
T ss_dssp -----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-----------HHHHCCCC-C
T ss_pred -----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH-----------HHHhCCCC-C
Confidence 2346799999999933 6789999999999999999999997643221111 11111110 0
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERI-----HTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----s~~ev~~ 440 (457)
.. .....+.+++.+|++.||++|| ++.|+.+
T Consensus 223 p~------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 223 PP------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CT------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CC------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 00 1134588999999999999999 8888763
No 108
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.8e-42 Score=330.44 Aligned_cols=246 Identities=24% Similarity=0.318 Sum_probs=199.0
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CC-------CEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCee
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DG-------TNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK 244 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g-------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 244 (457)
++|...+.||+|+||.||+|+.. ++ ..||+|++..........+.+|++++++++||||+++++++...+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 57888899999999999999864 23 57999999876666677899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc--------EEEe
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV--------AHVS 316 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~--------~kl~ 316 (457)
++||||+++|+|.+++......+++..+..++.|++.||.||| ..+|+||||||+||+++.++. +||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE----ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh----hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 9999999999999999987766999999999999999999999 678999999999999998887 9999
Q ss_pred ccccccccCCCCCcceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCC-CCCCCCCcHHHHHHhhcCc
Q 044428 317 DFGISKLLGEGDDSLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKP-TNDLGEMSLKHWVNQSLPH 390 (457)
Q Consensus 317 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p-~~~~~~~~l~~~~~~~~~~ 390 (457)
|||++...... ....+|+.|+|||. .++.++||||||+++|||++|..| +..............
T Consensus 164 Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~---- 233 (289)
T 4fvq_A 164 DPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED---- 233 (289)
T ss_dssp CCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT----
T ss_pred cCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc----
Confidence 99998765321 22457889999993 367899999999999999996554 433221111111110
Q ss_pred hhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHH
Q 044428 391 KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKV 447 (457)
Q Consensus 391 ~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~ 447 (457)
...+... .+..+.+++.+|++.||++|||+.|+++.|+++..
T Consensus 234 ------~~~~~~~---------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 234 ------RHQLPAP---------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp ------TCCCCCC---------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred ------cCCCCCC---------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 0000000 12347899999999999999999999999988643
No 109
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1e-41 Score=323.30 Aligned_cols=248 Identities=21% Similarity=0.307 Sum_probs=203.1
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
..++|...+.||+|+||.||+|... ++..||+|++..........+.+|++++++++||||+++++++...+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3467899999999999999999875 577999999987655566789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee---cCCCcEEEeccccccccCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~~~~ 326 (457)
|+++++|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||++ +.++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 87 LCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH----KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred ccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 999999999987654 4899999999999999999999 6789999999999999 7889999999999987654
Q ss_pred CCCcceeccccccccccCCC---CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE---~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
.. ......||+.|+||| ..++.++||||||+++|||++|+.||...........+......
T Consensus 162 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------- 225 (277)
T 3f3z_A 162 GK---MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFT------------- 225 (277)
T ss_dssp TS---CBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------------
T ss_pred cc---chhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-------------
Confidence 32 223457999999999 44788999999999999999999999764422221111111000
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
........++..+.+++.+|++.||++|||+.|+++
T Consensus 226 -~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 226 -FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -CCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000011123456889999999999999999999975
No 110
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.8e-42 Score=326.63 Aligned_cols=256 Identities=22% Similarity=0.394 Sum_probs=205.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEecc
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFM 251 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (457)
.++|...+.||+|+||.||+|+..++..||||++.... .....+.+|++++++++||||+++++++.. +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 36788889999999999999999888899999997543 235678999999999999999999999874 5689999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc
Q 044428 252 PNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330 (457)
Q Consensus 252 ~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 330 (457)
++++|.+++.... ..+++..+..++.|++.||.||| ..+++||||||+||++++++.+||+|||+++.......
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 164 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE----ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY- 164 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-
Confidence 9999999997543 25899999999999999999999 67899999999999999999999999999987654321
Q ss_pred ceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccccc
Q 044428 331 LIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405 (457)
Q Consensus 331 ~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 405 (457)
.......++..|+|||. .++.++||||||+++|||++ |+.||...........+.... ....
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~----- 231 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY--------RMVR----- 231 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC--------CCCC-----
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhccc--------CCCC-----
Confidence 12233557889999993 36889999999999999999 999997643322222211110 0000
Q ss_pred chhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 406 SFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 406 ~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
+..++..+.+++.+|++.+|++|||+.++++.|+++......
T Consensus 232 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 232 ----PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred ----cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 012245689999999999999999999999999998776543
No 111
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.7e-42 Score=334.51 Aligned_cols=257 Identities=23% Similarity=0.381 Sum_probs=202.7
Q ss_pred hhcCCcCCccCCCCceEEEEEEe------CCCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL------SDGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 244 (457)
.++|...+.||+|+||.||+|+. .++..||||++.... ......+.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788899999999999999984 357789999997542 34456789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec---CCCcEEE
Q 044428 245 ALVLEFMPNGSLEKWLYSHN------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD---ENMVAHV 315 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~---~~~~~kl 315 (457)
++||||+++|+|.+++.... ..+++..++.++.|++.||.||| ..+|+||||||+||+++ .+..+||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH----~~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE----ENHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh----hCCeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999998754 34889999999999999999999 67899999999999998 4556999
Q ss_pred eccccccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCc
Q 044428 316 SDFGISKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPH 390 (457)
Q Consensus 316 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~ 390 (457)
+|||+++...............+++.|+||| ..++.++||||||+++|||+| |+.||...........+......
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~ 264 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 264 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC
Confidence 9999998664433222233456789999999 447889999999999999998 99999764432222222211100
Q ss_pred hhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 391 KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 391 ~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
.. +..++..+.+++.+||+.||.+||++.++++.|+.+.+..
T Consensus 265 --------~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 265 --------DP---------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp --------CC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred --------CC---------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 00 0122456889999999999999999999999999887654
No 112
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.8e-41 Score=330.05 Aligned_cols=273 Identities=22% Similarity=0.351 Sum_probs=211.2
Q ss_pred CHHHHHHHhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhh--cCCCccceeeeeeecC
Q 044428 164 SYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRN--VRHRNLIKILSGCSNL 241 (457)
Q Consensus 164 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~ 241 (457)
+...-....++|...+.||+|+||.||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3344455678999999999999999999998 5899999999754 33567788888887 7899999999999877
Q ss_pred C----eeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCeeeccCCCCCeeecCCCcE
Q 044428 242 D----FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH----ALAPIIHCDLKPSNILLDENMVA 313 (457)
Q Consensus 242 ~----~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----~~~~ivH~dlk~~NIll~~~~~~ 313 (457)
. ..++||||+++|+|.+++.... +++..++.++.|++.||.|||... ...+|+||||||+||+++.++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred CCccceeEEEEeecCCCcHHHHHhccC--ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 6 7899999999999999998754 899999999999999999999321 13579999999999999999999
Q ss_pred EEeccccccccCCCCCcc--eeccccccccccCCCCCCC----------CccchhhhhHHHHHHhcC----------CCC
Q 044428 314 HVSDFGISKLLGEGDDSL--IQTKTMATIGYMAPEGIVS----------TKCDVYSYGILLLETFSR----------KKP 371 (457)
Q Consensus 314 kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~----------~~~Dv~s~Gvvl~el~tg----------~~p 371 (457)
||+|||+++......... ......||+.|+|||.+.. .++||||||+++|||+|| ..|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 999999998765433221 1234579999999995432 579999999999999999 677
Q ss_pred CCCCC--CCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 372 TNDLG--EMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 372 ~~~~~--~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
|.... ......+....... ...+.+. ......+++..+.+++.+||+.||++|||+.||++.|+++.++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQ----KLRPNIP----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTS----CCCCCCC----GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccccCcCcccHHHHHHHHHHH----HhCCCCc----ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 76532 11222222211111 0111111 11112355778999999999999999999999999999998764
Q ss_pred h
Q 044428 450 L 450 (457)
Q Consensus 450 ~ 450 (457)
.
T Consensus 339 ~ 339 (342)
T 1b6c_B 339 G 339 (342)
T ss_dssp C
T ss_pred c
Confidence 3
No 113
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.2e-42 Score=340.67 Aligned_cols=269 Identities=21% Similarity=0.235 Sum_probs=205.7
Q ss_pred cccCHHHHHHHhhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhcC-----CCcccee
Q 044428 161 RRISYLDIQRATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-----HRNLIKI 234 (457)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l 234 (457)
..+++.+.....++|...+.||+|+||.||+|+. .+++.||||++... ......+..|++++..++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3445555556678999999999999999999997 47899999999743 233456788999999986 9999999
Q ss_pred eeeeecCCeeEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC----
Q 044428 235 LSGCSNLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE---- 309 (457)
Q Consensus 235 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~---- 309 (457)
++++...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+|||++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR----KMSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCTTCC
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCcccEEEcccccc
Confidence 99999999999999999 999999998765 45899999999999999999999 678999999999999975
Q ss_pred ---------------------CCcEEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHH
Q 044428 310 ---------------------NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLE 364 (457)
Q Consensus 310 ---------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~e 364 (457)
++.+||+|||+++..... .....||+.|+|||. .++.++|||||||++||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 889999999999875432 234678999999993 36889999999999999
Q ss_pred HhcCCCCCCCCCCCcHHHHHHhhcCchh----HHhc--------cccc-----cccccchh-----------HHHHHHHH
Q 044428 365 TFSRKKPTNDLGEMSLKHWVNQSLPHKL----AEVV--------DSNL-----VRREHSFS-----------AKMDCLLR 416 (457)
Q Consensus 365 l~tg~~p~~~~~~~~l~~~~~~~~~~~~----~~~~--------d~~l-----~~~~~~~~-----------~~~~~~~~ 416 (457)
|+||+.||...........+........ .+.. +... ........ ........
T Consensus 252 ll~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 252 LYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 9999999986543333333322221110 0100 0000 00000000 00001145
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHH
Q 044428 417 IMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 417 l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
+.+++.+|++.||++|||+.|+++
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHhcCChhhCCCHHHHhc
Confidence 789999999999999999999874
No 114
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.9e-42 Score=340.57 Aligned_cols=247 Identities=21% Similarity=0.283 Sum_probs=192.5
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (457)
.++|+..+.||+|+||.||+|+.. +++.||+|+++... ......+.+|..++.++ +||||+++++++...+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467899999999999999999975 68899999997653 22334578899999887 89999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++.... .+++..+..++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH----~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999998754 4899999999999999999999 67899999999999999999999999999986332
Q ss_pred CCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhH-Hhcccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLA-EVVDSNLV 401 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~-~~~d~~l~ 401 (457)
.. .......||+.|+|||.+ ++.++|||||||++|||++|+.||...+....... .....+. .+....+.
T Consensus 206 ~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~---~~~~~~~~~i~~~~~~ 280 (396)
T 4dc2_A 206 PG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ---NTEDYLFQVILEKQIR 280 (396)
T ss_dssp TT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC---------CCHHHHHHHHHHCCCC
T ss_pred CC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch---hhHHHHHHHHhccccC
Confidence 21 123457899999999943 67899999999999999999999965322111000 0000011 11111110
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHT 435 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~ 435 (457)
... .....+.+++.+|++.||++||++
T Consensus 281 -~p~------~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 -IPR------SLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -CCT------TSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -CCC------cCCHHHHHHHHHHhcCCHhHcCCC
Confidence 000 123457899999999999999996
No 115
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.4e-42 Score=326.98 Aligned_cols=261 Identities=21% Similarity=0.259 Sum_probs=196.6
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888899999999999999975 68999999997543 2334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
|+++ ++.+.+......+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH----~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH----SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV- 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-
Confidence 9974 677777665566999999999999999999999 6789999999999999999999999999998764322
Q ss_pred cceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCC-CCcHHHHHHhhcCc----hhHHhcc--
Q 044428 330 SLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLG-EMSLKHWVNQSLPH----KLAEVVD-- 397 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~-~~~l~~~~~~~~~~----~~~~~~d-- 397 (457)
.......||+.|+|||.+ ++.++|||||||++|||++|..|+.... .......+...... .+.....
T Consensus 156 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 156 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp -SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred -ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 123346789999999933 6889999999999999999988864322 11111111111110 0000000
Q ss_pred -ccccc----cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 398 -SNLVR----REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 398 -~~l~~----~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
..... ..............+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000 00000000122456789999999999999999999875
No 116
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-42 Score=338.69 Aligned_cols=241 Identities=27% Similarity=0.360 Sum_probs=195.8
Q ss_pred hcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788899999999999999997 578999999997542 222356889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+ +|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||+++++.+||+|||++.......
T Consensus 89 E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH----RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH----HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred ECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 999 789999887654 4899999999999999999999 6679999999999999999999999999998764432
Q ss_pred CcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
. .....||+.|+|||.+ .+.++|||||||++|||++|+.||.......+ ...+.......
T Consensus 163 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------------~~~i~~~~~~~ 227 (336)
T 3h4j_B 163 F---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL------------FKKVNSCVYVM 227 (336)
T ss_dssp T---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC------------BCCCCSSCCCC
T ss_pred c---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH------------HHHHHcCCCCC
Confidence 2 2346799999999955 26789999999999999999999975322110 00000000000
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ...+..+.+++.+|++.||.+|||+.|+++
T Consensus 228 p------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 228 P------DFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp C------TTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred c------ccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 0 112345789999999999999999999975
No 117
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.2e-43 Score=340.64 Aligned_cols=265 Identities=23% Similarity=0.360 Sum_probs=187.2
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhh--cCCCccceeeeeeecCC----eeEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRN--VRHRNLIKILSGCSNLD----FKAL 246 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 246 (457)
++|...+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 67899999999999999999874 889999998744 33457778888887 79999999999998776 7899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCeeeccCCCCCeeecCCCcEEEecccccc
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH----ALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 322 (457)
||||+++|+|.+++.... +++..++.++.|++.||.|||... ...+|+||||||+|||++.++.+||+|||+++
T Consensus 79 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHHCC--BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhccC--cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 999999999999997754 788889999999999999999321 14679999999999999999999999999998
Q ss_pred ccCCCCCcc--eeccccccccccCCCCCCC----------CccchhhhhHHHHHHhcC----------CCCCCCCCCCcH
Q 044428 323 LLGEGDDSL--IQTKTMATIGYMAPEGIVS----------TKCDVYSYGILLLETFSR----------KKPTNDLGEMSL 380 (457)
Q Consensus 323 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~----------~~~Dv~s~Gvvl~el~tg----------~~p~~~~~~~~l 380 (457)
......... ......||+.|+|||.+.. .++|||||||++|||+|| ..||.......
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~- 235 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD- 235 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C-
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC-
Confidence 764433221 1223479999999995422 479999999999999999 55554321100
Q ss_pred HHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 381 KHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
.........+....+...........+++..+.+++.+||+.||++|||+.+|++.|+++.++.
T Consensus 236 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 -----PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp -----CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred -----ccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 0000011112222221111111122356778999999999999999999999999999876543
No 118
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.5e-42 Score=336.74 Aligned_cols=242 Identities=28% Similarity=0.345 Sum_probs=196.8
Q ss_pred hcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
+.|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999986 578999999997542 233457899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||++ |+|.+++......+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 9996 7898888766667999999999999999999999 678999999999999999999999999999875432
Q ss_pred CcceeccccccccccCCCCC-------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
....||+.|+|||.+ ++.++|||||||++|||++|+.||...........+.. ...+...
T Consensus 208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~--------~~~~~~~ 274 (348)
T 1u5q_A 208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--------NESPALQ 274 (348)
T ss_dssp -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--------SCCCCCC
T ss_pred -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--------cCCCCCC
Confidence 235699999999943 67799999999999999999999975432211111111 0011111
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
.. .++..+.+++.+||+.+|++|||+.++++.
T Consensus 275 ~~--------~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 275 SG--------HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CT--------TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CC--------CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 123457899999999999999999999853
No 119
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=8.9e-42 Score=326.54 Aligned_cols=264 Identities=19% Similarity=0.230 Sum_probs=202.9
Q ss_pred HhhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeee-ecCCeeEEEE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGC-SNLDFKALVL 248 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 248 (457)
..++|...+.||+|+||.||+|+. .+++.||||++..... ...+.+|+.++..++|++++..+.++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999996 5789999998765432 23578899999999998888877765 6677889999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee---cCCCcEEEeccccccccC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLG 325 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~~~ 325 (457)
||+ +++|.+++......+++..+..++.|++.||.||| ..+|+||||||+||++ +.++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 99999999876667999999999999999999999 6789999999999999 789999999999998765
Q ss_pred CCCCcc-----eeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhc
Q 044428 326 EGDDSL-----IQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396 (457)
Q Consensus 326 ~~~~~~-----~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 396 (457)
...... ......||+.|+|||. .++.++|||||||++|||++|+.||............ ..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--------~~~~ 231 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY--------ERIS 231 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH--------HHHH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhh--------hhhh
Confidence 433211 1234679999999993 3677999999999999999999999764322111111 1111
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 397 d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
........ ......++..+.+++.+|++.+|++||++.++++.|+++.++...
T Consensus 232 ~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 232 EKKMSTPI--EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp HHHHHSCH--HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred cccccchh--hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 11000000 000011245689999999999999999999999999999887643
No 120
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.3e-42 Score=336.98 Aligned_cols=246 Identities=24% Similarity=0.333 Sum_probs=197.9
Q ss_pred HHHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCe
Q 044428 169 QRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDF 243 (457)
Q Consensus 169 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 243 (457)
....++|...+.||+|+||.||+|+.. +|+.||+|+++... ......+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345578999999999999999999975 68999999997642 23455678899999887 99999999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 244 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
.++||||+++|+|.+++.... .+++..+..++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 999999999999999998654 4899999999999999999999 67899999999999999999999999999986
Q ss_pred cCCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccc
Q 044428 324 LGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSN 399 (457)
Q Consensus 324 ~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 399 (457)
...... ......||+.|+|||.+ ++.++|||||||++|||++|+.||.......+...+... ...
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~---------~~~ 236 (345)
T 1xjd_A 168 NMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD---------NPF 236 (345)
T ss_dssp CCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC---------CCC
T ss_pred cccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC---------CCC
Confidence 432221 23446799999999943 678999999999999999999999764432222211110 000
Q ss_pred ccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 044428 400 LVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTT-NAA 439 (457)
Q Consensus 400 l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~-ev~ 439 (457)
+.. .....+.+++.+|++.||++||++. |+.
T Consensus 237 ~p~---------~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 237 YPR---------WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CCT---------TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CCc---------ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 100 1134588999999999999999997 553
No 121
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.1e-41 Score=324.12 Aligned_cols=262 Identities=19% Similarity=0.238 Sum_probs=204.6
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeee-ecCCeeEEEEe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGC-SNLDFKALVLE 249 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 249 (457)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+|+.++..++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46788999999999999999996 5899999999875432 24688999999999999887777665 56678899999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee---cCCCcEEEeccccccccCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~~~~ 326 (457)
|+ +++|.+++......+++..+..++.|++.||+||| ..+|+||||||+||++ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 99999999866667999999999999999999999 6789999999999999 5889999999999987654
Q ss_pred CCCcc-----eeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcc
Q 044428 327 GDDSL-----IQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVD 397 (457)
Q Consensus 327 ~~~~~-----~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d 397 (457)
..... ......||+.|+|||. .++.++|||||||++|||++|+.||........... ...+..
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--------~~~~~~ 232 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK--------YERISE 232 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH--------HHHHHH
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhh--------hhhhcc
Confidence 33211 1234679999999993 367899999999999999999999986332111000 001110
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 398 SNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 398 ~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
....... ......++..+.+++.+|++.||++||++.++++.|+++.++..
T Consensus 233 ~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 233 KKMSTPI--EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHHSCH--HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cccCCch--HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 0000000 00001224568999999999999999999999999999887654
No 122
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.1e-42 Score=340.56 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=194.7
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcC--CCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVR--HRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 248 (457)
.+|...+.||+|+||.||++...+++.||||++.... ......+.+|+.++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4588899999999999999998889999999987542 344567999999999997 599999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
| +.+++|.+++.... .+++..+..++.||+.||.||| ..+|+||||||+|||++ ++.+||+|||+++.+....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH----~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH----TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 56899999998765 5889999999999999999999 77899999999999995 5899999999998775433
Q ss_pred CcceeccccccccccCCCC---------------CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhH
Q 044428 329 DSLIQTKTMATIGYMAPEG---------------IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLA 393 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~---------------~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~ 393 (457)
.........||+.|+|||. .++.++|||||||++|||++|+.||..... .... +.
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--~~~~--------~~ 278 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QISK--------LH 278 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC--HHHH--------HH
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH--HHHH--------HH
Confidence 3323345679999999994 367789999999999999999999975321 1111 11
Q ss_pred HhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 394 EVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 394 ~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
.++++......... ....+.+++.+||+.||++||++.|+++.
T Consensus 279 ~~~~~~~~~~~~~~-----~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 AIIDPNHEIEFPDI-----PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHCTTSCCCCCCC-----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCccccCCCCcc-----chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 22222211111110 13457899999999999999999999853
No 123
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=9.9e-42 Score=339.62 Aligned_cols=265 Identities=18% Similarity=0.229 Sum_probs=199.8
Q ss_pred hhcCCcCCccCCC--CceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 172 TNEFDECNLLGIG--SFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 172 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
.++|+..+.||+| +||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4678899999999 99999999986 79999999997653 3345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccC
Q 044428 247 VLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 325 (457)
||||+++|+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||.+....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999999998753 45899999999999999999999 6789999999999999999999999999987543
Q ss_pred CCCCc-----ceeccccccccccCCCC------CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHH-HhhcCchh-
Q 044428 326 EGDDS-----LIQTKTMATIGYMAPEG------IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWV-NQSLPHKL- 392 (457)
Q Consensus 326 ~~~~~-----~~~~~~~gt~~y~aPE~------~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~-~~~~~~~~- 392 (457)
..... .......||+.|+|||. .++.++|||||||++|||++|+.||............ ....+...
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 259 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccc
Confidence 21111 11223478999999993 3678999999999999999999999764433322111 10000000
Q ss_pred ----------------------HHhcccccc----ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 393 ----------------------AEVVDSNLV----RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 393 ----------------------~~~~d~~l~----~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+.+..... ...............+.+++.+|++.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000000000 000000011223456899999999999999999999985
No 124
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.2e-42 Score=334.42 Aligned_cols=248 Identities=24% Similarity=0.344 Sum_probs=193.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCC--CccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRH--RNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv 247 (457)
.++|+..+.||+|+||.||++...+++.||||++.... ......+.+|+.++.+++| |||+++++++...+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35688889999999999999999899999999987542 3345678999999999987 9999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|| +.+|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++ ++.+||+|||+++.....
T Consensus 88 ~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH----~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred Ee-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 99 46889999998764 4899999999999999999999 67899999999999997 678999999999877544
Q ss_pred CCcceeccccccccccCCCCC---------------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchh
Q 044428 328 DDSLIQTKTMATIGYMAPEGI---------------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKL 392 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~---------------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~ 392 (457)
..........||+.|+|||.+ ++.++|||||||++|||++|+.||..... .... .
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~--------~ 230 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QISK--------L 230 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHH--------H
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh--HHHH--------H
Confidence 333333456799999999943 56789999999999999999999975322 1111 1
Q ss_pred HHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 393 AEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 393 ~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
...+++........ .+...+.+++.+|++.||++|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~-----~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 231 HAIIDPNHEIEFPD-----IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHHCTTSCCCCCC-----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhcCCcccCCcc-----cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 12222211111111 113457899999999999999999999854
No 125
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=6.6e-42 Score=327.16 Aligned_cols=257 Identities=25% Similarity=0.393 Sum_probs=203.0
Q ss_pred hhcCCcCC-ccCCCCceEEEEEEe---CCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeE
Q 044428 172 TNEFDECN-LLGIGSFGSVYKGTL---SDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKA 245 (457)
Q Consensus 172 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (457)
.++|...+ .||+|+||.||+|.+ .+++.||||++.... ......+.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 899999999999964 257889999997653 22356799999999999999999999999 566789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccC
Q 044428 246 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 325 (457)
+||||+++++|.+++.... .+++..++.++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++...
T Consensus 94 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH----hCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 9999999999999998764 4899999999999999999999 6789999999999999999999999999998775
Q ss_pred CCCCcc-eeccccccccccCCCCC----CCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccc
Q 044428 326 EGDDSL-IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSN 399 (457)
Q Consensus 326 ~~~~~~-~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 399 (457)
...... ......+++.|+|||.+ ++.++||||||+++|||+| |+.||...........+..... ..
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------~~ 240 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER--------MG 240 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--------CC
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--------CC
Confidence 433221 12234567899999943 5779999999999999999 9999976543332222221110 00
Q ss_pred ccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 400 LVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 400 l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
. +..++..+.+++.+|++.||++||++.++++.|+++-..-..
T Consensus 241 ~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 241 C---------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp C---------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred C---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 0 012245689999999999999999999999999998665443
No 126
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.5e-41 Score=332.57 Aligned_cols=246 Identities=22% Similarity=0.295 Sum_probs=193.3
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 247 (457)
++|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|..++.++ +||||+++++++...+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57888999999999999999975 68999999997643 23445688999999988 899999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++|+|.+++.... .+++..+..++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999998654 4899999999999999999999 678999999999999999999999999999864322
Q ss_pred CCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhH-Hhccccccc
Q 044428 328 DDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLA-EVVDSNLVR 402 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~-~~~d~~l~~ 402 (457)
.. ......||+.|+|||.+ ++.++|||||||++|||++|+.||...+..+.... .....+. .+......
T Consensus 164 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~---~~~~~~~~~i~~~~~~- 237 (345)
T 3a8x_A 164 GD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ---NTEDYLFQVILEKQIR- 237 (345)
T ss_dssp TC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC----------CHHHHHHHHHHCCCC-
T ss_pred CC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc---ccHHHHHHHHHcCCCC-
Confidence 21 23446799999999943 67899999999999999999999975322111000 0000011 11111110
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHT 435 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~ 435 (457)
.. ......+.+++.+|++.||++||++
T Consensus 238 ~p------~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 IP------RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CC------TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CC------CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 00 0124458899999999999999996
No 127
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.3e-41 Score=326.36 Aligned_cols=260 Identities=21% Similarity=0.297 Sum_probs=195.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQ---LERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|...+.||+|+||.||+|.. .+|+.||||++... .......+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35788899999999999999987 47999999998753 233456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 248 LEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
|||+++|+|.+++.. ....+++..++.++.+++.||.||| ..+++||||||+||+++.++.+||+|||+++..
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999975 3355899999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccc
Q 044428 325 GEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 400 (457)
..... ......|++.|+|||. .++.++||||||+++|||++|+.||..... .......... ....+.+
T Consensus 187 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~-----~~~~~~~ 258 (310)
T 2wqm_A 187 SSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIE-----QCDYPPL 258 (310)
T ss_dssp --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-CHHHHHHHHH-----TTCSCCC
T ss_pred cCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-hHHHHHHHhh-----cccCCCC
Confidence 43221 1233568999999993 367799999999999999999999965321 1122111110 0000000
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhh
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLD 451 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~ 451 (457)
.. ..++..+.+++.+|++.||++||++.+|++.|++++.....
T Consensus 259 ~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 259 PS--------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp CT--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred cc--------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 00 11244688999999999999999999999999999887643
No 128
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-42 Score=360.12 Aligned_cols=252 Identities=27% Similarity=0.447 Sum_probs=204.4
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
..++|...+.||+|+||.||+|++.++..||||+++... .....|.+|++++++++||||+++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 346788888999999999999999888889999998653 234679999999999999999999999876 678999999
Q ss_pred cCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 251 MPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 251 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
+++|+|.+++.... ..+++.+++.++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 417 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 417 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-
Confidence 99999999997532 45899999999999999999999 6789999999999999999999999999998764311
Q ss_pred cceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 330 SLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
........++..|+||| ..++.++|||||||++|||+| |+.||...........+..... +
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~----------~---- 483 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR----------M---- 483 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCC----------C----
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC----------C----
Confidence 11122345788999999 447889999999999999999 9999975432222222211100 0
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~ 446 (457)
..+..++..+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 484 ---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 484 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 001134567899999999999999999999999998764
No 129
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.6e-42 Score=325.38 Aligned_cols=248 Identities=29% Similarity=0.413 Sum_probs=196.4
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecC-CeeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNL-DFKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~ 250 (457)
.++|+..+.||+|+||.||+|+.. |+.||||++.... ....+.+|++++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 367888899999999999999884 8899999997543 456789999999999999999999987554 578999999
Q ss_pred cCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 251 MPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 251 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
+++|+|.+++.... ..+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH----hCCccccCCCcceEEEeCCCcEEEeeccccccccccc-
Confidence 99999999998654 23788999999999999999999 6789999999999999999999999999988653321
Q ss_pred cceeccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 330 SLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
....+++.|+|||. .++.++||||||+++|||+| |+.||...........+..... ...
T Consensus 172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~---- 235 (278)
T 1byg_A 172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK--------MDA---- 235 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC--------CCC----
T ss_pred ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC--------CCC----
Confidence 22457889999993 37889999999999999998 9999976544333322221110 000
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
+..++..+.+++.+|++.||++||++.|+++.|++++..
T Consensus 236 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 236 -----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 112245688999999999999999999999999999875
No 130
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.2e-41 Score=333.91 Aligned_cols=240 Identities=22% Similarity=0.268 Sum_probs=197.9
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|+..+.||+|+||.||+++.. +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999975 79999999997542 234567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++|+|.+++.... .+++..+..++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999998754 4899999999999999999999 678999999999999999999999999999876432
Q ss_pred CcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
.....||+.|+|||.+ ++.++|||||||++|||++|+.||...........+. ...+. ..
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~-----------~~~~~-~p 258 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV-----------SGKVR-FP 258 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-----------HCCCC-CC
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHH-----------cCCCC-CC
Confidence 2235799999999943 6789999999999999999999997643222111111 11110 00
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIH-----TTNAAA 440 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs-----~~ev~~ 440 (457)
..++..+.+++.+|++.||++||+ +.|+.+
T Consensus 259 ------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 259 ------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 012445889999999999999998 777764
No 131
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=334.54 Aligned_cols=247 Identities=23% Similarity=0.301 Sum_probs=183.5
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
..++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+|++++.+++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3467888999999999999999986 68899999997543 33568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC---CCcEEEeccccccccCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE---NMVAHVSDFGISKLLGE 326 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfg~~~~~~~ 326 (457)
|+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH----ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 999999999998654 4899999999999999999999 678999999999999975 88999999999987643
Q ss_pred CCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
.. ......||+.|+|||. .++.++|||||||++|||++|+.||....... ..... +.......
T Consensus 204 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~--------i~~~~~~~ 270 (349)
T 2w4o_A 204 QV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--FMFRR--------ILNCEYYF 270 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH--HHHHH--------HHTTCCCC
T ss_pred cc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH--HHHHH--------HHhCCCcc
Confidence 21 2234678999999993 36889999999999999999999997643221 11111 11100000
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.. ....+.+..+.+++.+|++.||++|||+.|+++
T Consensus 271 ~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 271 IS---PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp CT---TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CC---chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 000122456889999999999999999999876
No 132
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.7e-42 Score=330.05 Aligned_cols=260 Identities=22% Similarity=0.276 Sum_probs=193.3
Q ss_pred hcCCcC-CccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEEEEe
Q 044428 173 NEFDEC-NLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 173 ~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 249 (457)
+.|... +.||+|+||.||+|+.. +++.||||++..........+.+|++++.++ +||||+++++++...+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 467664 68999999999999864 7899999999866555567789999999985 79999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc---EEEeccccccccCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV---AHVSDFGISKLLGE 326 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfg~~~~~~~ 326 (457)
|+++|+|.+++.... .+++..+..++.|++.||+||| ..+|+||||||+||+++.++. +||+|||+++....
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH----NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH----hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999998754 4899999999999999999999 678999999999999988776 99999999986532
Q ss_pred CCCc-----ceeccccccccccCCCCC---------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc--
Q 044428 327 GDDS-----LIQTKTMATIGYMAPEGI---------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH-- 390 (457)
Q Consensus 327 ~~~~-----~~~~~~~gt~~y~aPE~~---------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~-- 390 (457)
.... .......||+.|+|||.+ ++.++|||||||++|||++|+.||......+. .|.......
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~ 245 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC-GWDRGEACPAC 245 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCS-CC----CCHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccc-cccccccchhH
Confidence 2111 111235699999999943 57899999999999999999999976432210 000000000
Q ss_pred --hhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 391 --KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 391 --~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+.+.+...... .........+..+.+++.+|++.||++|||+.|+++
T Consensus 246 ~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 246 QNMLFESIQEGKYE--FPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHCCCC--CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHhccCcc--cCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 000000000000 000011123456899999999999999999999986
No 133
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.1e-41 Score=333.12 Aligned_cols=253 Identities=26% Similarity=0.381 Sum_probs=203.8
Q ss_pred HHHHHHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch--------hhHHHHHHHHHHHhhc-CCCccceee
Q 044428 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE--------RTFVSFNSECEVLRNV-RHRNLIKIL 235 (457)
Q Consensus 166 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~ 235 (457)
.......++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++.++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344556678999999999999999999985 799999999865431 1245688999999999 799999999
Q ss_pred eeeecCCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEE
Q 044428 236 SGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHV 315 (457)
Q Consensus 236 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl 315 (457)
+++......++||||+++++|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH----~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH----ANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEE
Confidence 99999999999999999999999998653 4899999999999999999999 678999999999999999999999
Q ss_pred eccccccccCCCCCcceeccccccccccCCCCC----------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHH
Q 044428 316 SDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVN 385 (457)
Q Consensus 316 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~ 385 (457)
+|||++..+..... .....||+.|+|||.+ ++.++|||||||++|||++|+.||...........+.
T Consensus 242 ~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~ 318 (365)
T 2y7j_A 242 SDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM 318 (365)
T ss_dssp CCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred EecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 99999987654322 2346799999999943 6779999999999999999999997643222222111
Q ss_pred hhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 386 QSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 386 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
..... ........++..+.+++.+|++.||++|||+.|+++
T Consensus 319 ~~~~~--------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 319 EGQYQ--------------FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HTCCC--------------CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hCCCC--------------CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11000 000011122456889999999999999999999975
No 134
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.3e-42 Score=334.72 Aligned_cols=255 Identities=24% Similarity=0.293 Sum_probs=197.0
Q ss_pred HHHHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-----hhhHHHHHHHHHHHhhcCCCccceeeeeeecC
Q 044428 168 IQRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-----ERTFVSFNSECEVLRNVRHRNLIKILSGCSNL 241 (457)
Q Consensus 168 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 241 (457)
+....++|...+.||+|+||.||+|+.. ++..||+|++.... ......+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 4566789999999999999999999874 78899999987542 33456789999999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHHHHhhC---------------------------------------CCCCCHHHHHHHHHHHHHH
Q 044428 242 DFKALVLEFMPNGSLEKWLYSH---------------------------------------NYFLDILERLNIMIDVGLA 282 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia~~ 282 (457)
+..++||||+++|+|.+++... ...+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999998521 1123566778899999999
Q ss_pred HHHHHhcCCCCCeeeccCCCCCeeecCCC--cEEEeccccccccCCCCCc--ceeccccccccccCCCC------CCCCc
Q 044428 283 LEYLHYGHALAPIIHCDLKPSNILLDENM--VAHVSDFGISKLLGEGDDS--LIQTKTMATIGYMAPEG------IVSTK 352 (457)
Q Consensus 283 l~~LH~~~~~~~ivH~dlk~~NIll~~~~--~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~------~~~~~ 352 (457)
|+||| ..+|+||||||+||+++.++ .+||+|||+++.+...... .......||+.|+|||. .++.+
T Consensus 181 l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 181 LHYLH----NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHH----HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHH----HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999 67899999999999998776 8999999999875432211 12334679999999993 35679
Q ss_pred cchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044428 353 CDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER 432 (457)
Q Consensus 353 ~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~R 432 (457)
+||||||+++|||++|+.||........... +......... .........+.+++.+|++.+|++|
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~-----------~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R 322 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQ-----------VLNKKLCFEN---PNYNVLSPLARDLLSNLLNRNVDER 322 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-----------HHHCCCCTTS---GGGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHHHHHH-----------HHhcccccCC---cccccCCHHHHHHHHHHcCCChhHC
Confidence 9999999999999999999976442221111 1111110000 0011124568899999999999999
Q ss_pred CCHHHHHH
Q 044428 433 IHTTNAAA 440 (457)
Q Consensus 433 Ps~~ev~~ 440 (457)
|++.|+++
T Consensus 323 ps~~~~l~ 330 (345)
T 3hko_A 323 FDAMRALQ 330 (345)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHhc
Confidence 99999976
No 135
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3e-41 Score=327.33 Aligned_cols=247 Identities=22% Similarity=0.277 Sum_probs=200.2
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchh------hHHHHHHHHHHHhhcCCCccceeeeeeecCCee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLER------TFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 244 (457)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+|+.++.+++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467889999999999999999975 6899999999754321 356789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC----cEEEecccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM----VAHVSDFGI 320 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg~ 320 (457)
++||||+++++|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH----~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 99999999999999998654 5889999999999999999999 67899999999999999888 799999999
Q ss_pred ccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhc
Q 044428 321 SKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396 (457)
Q Consensus 321 ~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 396 (457)
++....... .....||+.|+|||. .++.++||||||+++|||++|+.||...........+...... .
T Consensus 166 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-----~ 237 (321)
T 2a2a_A 166 AHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD-----F 237 (321)
T ss_dssp CEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC-----C
T ss_pred ceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc-----c
Confidence 987654321 234569999999993 3678999999999999999999999764322222111111000 0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 397 d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
++ ......+..+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 238 DE---------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CH---------HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred Ch---------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 001122446889999999999999999999986
No 136
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-42 Score=339.83 Aligned_cols=259 Identities=12% Similarity=0.103 Sum_probs=200.0
Q ss_pred hcCCcCCccCCCCceEEEEEEeCC---------CCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccce----------
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSD---------GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIK---------- 233 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 233 (457)
++|...+.||+|+||.||+|+... ++.||||++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578888999999999999998763 789999998744 35789999999999999998
Q ss_pred -----eeeeeec-CCeeEEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCee
Q 044428 234 -----ILSGCSN-LDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNIL 306 (457)
Q Consensus 234 -----l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIl 306 (457)
+++++.. ....++||||+ +++|.+++... ...+++..++.++.|++.||.||| ..+|+||||||+||+
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH----ENEYVHGNVTAENIF 191 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCCGGGEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCHHHEE
Confidence 5566655 67889999999 99999999875 356999999999999999999999 678999999999999
Q ss_pred ecCCC--cEEEeccccccccCCCCCcc-----eeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCC
Q 044428 307 LDENM--VAHVSDFGISKLLGEGDDSL-----IQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDL 375 (457)
Q Consensus 307 l~~~~--~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~ 375 (457)
++.++ .+||+|||+++.+....... ......||+.|+|||. .++.++||||||+++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 99999999998764322111 1133579999999993 3678999999999999999999999764
Q ss_pred CCCc--HHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 376 GEMS--LKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 376 ~~~~--l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
.... +...... ......+..+..... ...+..+.+++.+|++.||++||++.++++.|+++.++..
T Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 272 LPNTEDIMKQKQK-FVDKPGPFVGPCGHW--------IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TTCHHHHHHHHHH-HHHSCCCEECTTSCE--------ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHh-ccCChhhhhhhcccc--------CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 3111 1111110 000000011100000 0113568999999999999999999999999999987754
No 137
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.2e-42 Score=332.61 Aligned_cols=255 Identities=21% Similarity=0.370 Sum_probs=190.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCe----
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDF---- 243 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 243 (457)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.++.+++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 36788899999999999999996 578999999997643 2334578899999999999999999999876543
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 244 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
.++||||+++|+|.+++.... .+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH----QNGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 499999999999999998654 4899999999999999999999 67899999999999999999999999999987
Q ss_pred cCCCCCc-ceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccc
Q 044428 324 LGEGDDS-LIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398 (457)
Q Consensus 324 ~~~~~~~-~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~ 398 (457)
....... .......||+.|+|||. .++.++||||||+++|||+||+.||...............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~----------- 234 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE----------- 234 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC-----------
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC-----------
Confidence 6543222 12233568999999993 4678999999999999999999999764322111110000
Q ss_pred cccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHH-HHHHHh
Q 044428 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAA-AKLRKI 445 (457)
Q Consensus 399 ~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~-~~L~~i 445 (457)
... ........++..+.+++.+|++.||++||++.+++ ..+..+
T Consensus 235 ~~~---~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 235 DPI---PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CCC---CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCC---CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 000 00000112245688999999999999999776655 444433
No 138
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=338.75 Aligned_cols=260 Identities=16% Similarity=0.137 Sum_probs=194.1
Q ss_pred hcCCcCCccCCCCceEEEEEEeC----CCCEEEEEEecccchh-----------hHHHHHHHHHHHhhcCCCccceeeee
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS----DGTNVAIKIFNLQLER-----------TFVSFNSECEVLRNVRHRNLIKILSG 237 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~~ 237 (457)
++|...+.||+|+||.||+|+.. ++..+|||++...... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57888899999999999999975 5788999998754311 12346788899999999999999999
Q ss_pred eec----CCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC--
Q 044428 238 CSN----LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM-- 311 (457)
Q Consensus 238 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~-- 311 (457)
+.. ....++||||+ +++|.+++.... .+++..++.++.|++.||.||| ..+|+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH----ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCcCHHHEEEccCCCC
Confidence 887 77899999999 999999998765 6899999999999999999999 67899999999999999887
Q ss_pred cEEEeccccccccCCCCCc-----ceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCc-HH
Q 044428 312 VAHVSDFGISKLLGEGDDS-----LIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMS-LK 381 (457)
Q Consensus 312 ~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~-l~ 381 (457)
.+||+|||+++.+...... .......||+.|+|||. .++.++|||||||++|||+||+.||....... ..
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876432111 11134579999999993 36889999999999999999999996422111 11
Q ss_pred HHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhH
Q 044428 382 HWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIK 446 (457)
Q Consensus 382 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~ 446 (457)
..........+.+.+...... ..++..+.+++.+|++.+|++||++.+|++.|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLKWAPS--------GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHTTTHHHHHHSCT--------TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHhhcccccHHHHhhccc--------cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 111111111111111100000 022456899999999999999999999999998753
No 139
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.3e-41 Score=330.78 Aligned_cols=244 Identities=21% Similarity=0.295 Sum_probs=187.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEe----CCCCEEEEEEecccc----hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL----SDGTNVAIKIFNLQL----ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDF 243 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 243 (457)
.++|+..+.||+|+||.||+++. .+|+.||+|+++... ......+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36788999999999999999987 478999999997542 2234567889999999999999999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 244 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
.++||||+++|+|.+++.... .+++.....++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH----~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH----QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH----hCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999998654 4888999999999999999999 67899999999999999999999999999986
Q ss_pred cCCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccc
Q 044428 324 LGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSN 399 (457)
Q Consensus 324 ~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 399 (457)
..... .......||+.|+|||.+ ++.++||||||+++|||++|+.||...........+. ...
T Consensus 171 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~-----------~~~ 237 (327)
T 3a62_A 171 SIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL-----------KCK 237 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-----------HTC
T ss_pred cccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-----------hCC
Confidence 43221 122346799999999943 6789999999999999999999997643222111111 111
Q ss_pred ccccccchhHHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 044428 400 LVRREHSFSAKMDCLLRIMNLALDCCMESPDERI-----HTTNAAA 440 (457)
Q Consensus 400 l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----s~~ev~~ 440 (457)
.. ... .....+.+++.+|++.||++|| ++.|+++
T Consensus 238 ~~-~p~------~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 238 LN-LPP------YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CC-CCT------TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CC-CCC------CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 10 000 1234588999999999999999 6667654
No 140
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-41 Score=324.32 Aligned_cols=246 Identities=25% Similarity=0.328 Sum_probs=194.3
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
++|...+.||+|+||.||+++.. ++..||+|++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 57888899999999999999874 68999999987654 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee---cCCCcEEEecccccccc
Q 044428 251 MPNGSLEKWLYSH---NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLL 324 (457)
Q Consensus 251 ~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~~ 324 (457)
+++|+|.+++... ...+++..+..++.|++.||.||| ..+|+||||||+||++ +.++.+||+|||+++..
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH----SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH----hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999998643 255899999999999999999999 6789999999999999 45688999999999876
Q ss_pred CCCCCcceeccccccccccCCC---CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 325 GEGDDSLIQTKTMATIGYMAPE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE---~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
.... ......||+.|+||| ..++.++||||||+++|||++|+.||............... .+...
T Consensus 178 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~---------~~~~~ 245 (285)
T 3is5_A 178 KSDE---HSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK---------EPNYA 245 (285)
T ss_dssp ------------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC---------CCCCC
T ss_pred CCcc---cCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC---------Ccccc
Confidence 4322 123467899999999 33678999999999999999999999764422222111111 01110
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.... ..+..+.+++.+|++.||++|||+.|+++
T Consensus 246 ~~~~------~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 VECR------PLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C--C------CCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cccC------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 01345789999999999999999999975
No 141
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-41 Score=344.61 Aligned_cols=242 Identities=25% Similarity=0.393 Sum_probs=200.2
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57888899999999999999975 79999999997543 223457899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH----~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999998654 4899999999999999999999 7889999999999999999999999999998765432
Q ss_pred CcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
......||+.|+|||.+ .+.++|||||||++|||++|+.||.......+...+.. .... .
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~-----------~~~~-~ 235 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD-----------GIFY-T 235 (476)
T ss_dssp ---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHT-----------TCCC-C
T ss_pred ---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc-----------CCcC-C
Confidence 22346799999999943 36789999999999999999999986543222221111 1110 0
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.. .....+.+++.+|++.||++|||+.|+++
T Consensus 236 p~------~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 236 PQ------YLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CT------TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Cc------cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 00 11345789999999999999999999986
No 142
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-41 Score=339.25 Aligned_cols=264 Identities=25% Similarity=0.323 Sum_probs=189.1
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEeccc--chhhHHHHHHHHHHHhhcC-CCccceeeeeeecCC--e
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVR-HRNLIKILSGCSNLD--F 243 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 243 (457)
...++|...+.||+|+||.||+|... +|+.||||++... .......+.+|+.++.++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34578999999999999999999874 7899999998643 2334566889999999997 999999999987543 7
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 244 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
.++||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH----SGGLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 899999997 6999999875 4899999999999999999999 67899999999999999999999999999987
Q ss_pred cCCCCC-------------------cceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCc
Q 044428 324 LGEGDD-------------------SLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMS 379 (457)
Q Consensus 324 ~~~~~~-------------------~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~ 379 (457)
...... ....+...||+.|+|||. .++.++|||||||++|||++|+.||...+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 533111 112234679999999993 36788999999999999999999997654332
Q ss_pred HHHHHHhhcCchhHHhc---ccc--------c--------cccccchhH----------HHHHHHHHHHHHHhccCCCCC
Q 044428 380 LKHWVNQSLPHKLAEVV---DSN--------L--------VRREHSFSA----------KMDCLLRIMNLALDCCMESPD 430 (457)
Q Consensus 380 l~~~~~~~~~~~~~~~~---d~~--------l--------~~~~~~~~~----------~~~~~~~l~~l~~~C~~~~P~ 430 (457)
....+.........+.+ ... + ......+.. ...+...+.+++.+|++.||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 22222111110000000 000 0 000000000 002245688999999999999
Q ss_pred CCCCHHHHHH
Q 044428 431 ERIHTTNAAA 440 (457)
Q Consensus 431 ~RPs~~ev~~ 440 (457)
+|||+.|+++
T Consensus 319 ~R~t~~e~l~ 328 (388)
T 3oz6_A 319 KRISANDALK 328 (388)
T ss_dssp GSCCHHHHTT
T ss_pred cCCCHHHHhC
Confidence 9999999875
No 143
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=326.64 Aligned_cols=262 Identities=25% Similarity=0.317 Sum_probs=195.3
Q ss_pred HhhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccch-----hhHHHHHHHHHHHhhcC---CCccceeeeeeecC
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLE-----RTFVSFNSECEVLRNVR---HRNLIKILSGCSNL 241 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 241 (457)
..++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999996 4789999999875321 12345677887777764 99999999998765
Q ss_pred C-----eeEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEE
Q 044428 242 D-----FKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHV 315 (457)
Q Consensus 242 ~-----~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl 315 (457)
. ..++||||++ |+|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH----ANCIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCEEE
Confidence 4 5799999996 69999998765 34899999999999999999999 677999999999999999999999
Q ss_pred eccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch
Q 044428 316 SDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK 391 (457)
Q Consensus 316 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~ 391 (457)
+|||+++...... ......||+.|+|||. .++.++|||||||++|||++|+.||...........+.......
T Consensus 162 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 238 (308)
T 3g33_A 162 ADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238 (308)
T ss_dssp CSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred eeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999998764322 2234678999999993 37889999999999999999999997654333322222111100
Q ss_pred ----hHHhc---cccccccccc--hhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 392 ----LAEVV---DSNLVRREHS--FSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 392 ----~~~~~---d~~l~~~~~~--~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
+.... ...+...... .....+....+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00000 0000000000 0001123456889999999999999999999975
No 144
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=334.37 Aligned_cols=250 Identities=17% Similarity=0.111 Sum_probs=200.0
Q ss_pred HhhcCCcCCccCCCCceEEEEEE------eCCCCEEEEEEecccchhhHHHHHHHHHHHhhcC---CCccceeeeeeecC
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGT------LSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR---HRNLIKILSGCSNL 241 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 241 (457)
..++|...+.||+|+||.||+|. ..+++.||||++.... ..++..|++++..++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678888999999999999994 4478999999997543 345677788777776 99999999999999
Q ss_pred CeeEEEEeccCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC--------
Q 044428 242 DFKALVLEFMPNGSLEKWLYS----HNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE-------- 309 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~-------- 309 (457)
+..++||||+++|+|.+++.. ....+++..+..++.|++.||+||| ..+|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH----~~~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH----DCEIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECGGGTCC---
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh----hCCeecCCCCHHHEEecccccCcccc
Confidence 999999999999999999975 3356999999999999999999999 778999999999999998
Q ss_pred ---CCcEEEeccccccccCCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHH
Q 044428 310 ---NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKH 382 (457)
Q Consensus 310 ---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~ 382 (457)
++.+||+|||+++.+.............||+.|+|||.+ ++.++|||||||++|||+||+.||.......
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--- 292 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--- 292 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---
Confidence 899999999999865433333344557899999999933 6889999999999999999999986422110
Q ss_pred HHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHHHHhHHHH
Q 044428 383 WVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDER-IHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 383 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~R-Ps~~ev~~~L~~i~~~~ 449 (457)
......+... .. ...+.+++..|++.+|.+| |++.++.+.|+++.++.
T Consensus 293 -----------~~~~~~~~~~-~~-------~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 -----------CKPEGLFRRL-PH-------LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp -----------EEECSCCTTC-SS-------HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -----------eeechhcccc-Cc-------HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0001111111 11 3346788999999999998 57888888888876654
No 145
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=335.77 Aligned_cols=261 Identities=20% Similarity=0.287 Sum_probs=194.8
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchh-hHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLER-TFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888899999999999999975 7899999999754322 222456799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 330 (457)
++ |+|.+++......+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH----RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 154 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--
Confidence 97 6999999887777999999999999999999999 6789999999999999999999999999998654322
Q ss_pred ceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch----hHHhcccc--
Q 044428 331 LIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK----LAEVVDSN-- 399 (457)
Q Consensus 331 ~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~----~~~~~d~~-- 399 (457)
.......||+.|+|||.+ ++.++|||||||++|||++|+.||...........+....... +.......
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhh
Confidence 122345689999999932 5788999999999999999999998755433333333221111 11111000
Q ss_pred ----ccc--cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 400 ----LVR--REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 400 ----l~~--~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
... ..............+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000 00000011122446789999999999999999999975
No 146
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=322.58 Aligned_cols=245 Identities=23% Similarity=0.348 Sum_probs=184.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35788899999999999999987 479999999997543 22346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++++|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH----SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 9999999999999987667999999999999999999999 678999999999999999999999999999876432
Q ss_pred CCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 328 DDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
.. ......||+.|+|||.+ .+.++||||||+++|||++|+.||......... ..+.......
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----------~~~~~~~~~~- 231 (278)
T 3cok_A 166 HE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-----------NKVVLADYEM- 231 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------CCSSCCCC-
T ss_pred CC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH-----------HHHhhcccCC-
Confidence 21 12235689999999954 577999999999999999999999764322111 1111111000
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ...+..+.+++.+|++.||++||++.++++
T Consensus 232 ~------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 P------SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp C------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c------cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0 012345889999999999999999999975
No 147
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-41 Score=335.18 Aligned_cols=248 Identities=21% Similarity=0.249 Sum_probs=188.1
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
.++|...+.||+|+||.||+++.. +++.||||++..... ....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467889999999999999999976 789999999975432 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc--EEEeccccccccCCCC
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV--AHVSDFGISKLLGEGD 328 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~--~kl~Dfg~~~~~~~~~ 328 (457)
+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH----~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH----SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 99999999997654 4899999999999999999999 678999999999999987765 9999999998543221
Q ss_pred CcceeccccccccccCCCCC----C-CCccchhhhhHHHHHHhcCCCCCCCCCC-CcHHHHHHhhcCchhHHhccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI----V-STKCDVYSYGILLLETFSRKKPTNDLGE-MSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~----~-~~~~Dv~s~Gvvl~el~tg~~p~~~~~~-~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
......||+.|+|||.+ + +.++|||||||++|||++|+.||..... ......+... .......
T Consensus 173 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~--------~~~~~~~ 241 (361)
T 3uc3_A 173 ---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI--------LSVKYSI 241 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHH--------HTTCCCC
T ss_pred ---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHH--------hcCCCCC
Confidence 12345699999999943 3 3348999999999999999999976432 2222222211 1111100
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
.. ...+...+.+++.+|++.+|++|||+.|+++.
T Consensus 242 ~~-----~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 PD-----DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CT-----TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CC-----cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00 00113457899999999999999999999863
No 148
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=328.86 Aligned_cols=255 Identities=22% Similarity=0.240 Sum_probs=200.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeee----cCCeeEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS----NLDFKAL 246 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~l 246 (457)
.++|...+.||+|+||.||+++. .+|+.||||++..........+.+|+++++.++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35788899999999999999997 579999999997665566778999999999999999999999986 3457899
Q ss_pred EEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 247 VLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
||||+++|+|.+++.. ....+++..++.++.|++.||.||| ..+|+||||||+||+++.++.+||+|||++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH----AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 9999999999999976 3456899999999999999999999 67899999999999999999999999999876
Q ss_pred cCCCCCcc-------eeccccccccccCCCCC-------CCCccchhhhhHHHHHHhcCCCCCCCC--CCCcHHHHHHhh
Q 044428 324 LGEGDDSL-------IQTKTMATIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDL--GEMSLKHWVNQS 387 (457)
Q Consensus 324 ~~~~~~~~-------~~~~~~gt~~y~aPE~~-------~~~~~Dv~s~Gvvl~el~tg~~p~~~~--~~~~l~~~~~~~ 387 (457)
........ ......||+.|+|||.+ ++.++||||||+++|||++|+.||... ..........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-- 261 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ-- 261 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH--
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh--
Confidence 53211100 01124579999999955 477999999999999999999998531 1111111111
Q ss_pred cCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHH
Q 044428 388 LPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKV 447 (457)
Q Consensus 388 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~ 447 (457)
....... ...++..+.+++.+|++.||.+||++.++++.|+.+..
T Consensus 262 ----------~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 262 ----------NQLSIPQ-----SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp ----------CC--CCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred ----------ccCCCCc-----cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 1000000 01124568999999999999999999999999998754
No 149
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-41 Score=321.80 Aligned_cols=241 Identities=26% Similarity=0.383 Sum_probs=177.7
Q ss_pred hcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|+..+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999986 478999999997542 223457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+ +++|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||++++++.+||+|||+++......
T Consensus 93 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 999 788888887654 4899999999999999999999 6789999999999999999999999999998764322
Q ss_pred CcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
. .....||+.|+|||.+ .+.++||||||+++|||++|+.||...........+.... ..+.
T Consensus 167 ~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~---------~~~~-- 232 (275)
T 2eue_A 167 F---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV---------YTLP-- 232 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC---------CCCC--
T ss_pred c---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CCCC--
Confidence 1 2335689999999943 3678999999999999999999997643222111111110 0000
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. .++..+.+++.+|++.||++|||+.|+++
T Consensus 233 -~------~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 233 -K------FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -T------TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -c------cCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0 12345889999999999999999999975
No 150
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=327.66 Aligned_cols=261 Identities=22% Similarity=0.260 Sum_probs=196.6
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch--hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE--RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888899999999999999975 689999999865432 234568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
|+++++|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH----KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999999887654 4899999999999999999999 67899999999999999999999999999987643222
Q ss_pred cceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch---hHHhccc---
Q 044428 330 SLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK---LAEVVDS--- 398 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~---~~~~~d~--- 398 (457)
......||+.|+|||. .++.++||||||+++|||++|+.||......+....+....... .......
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 158 --YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred --ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 2234578999999993 36789999999999999999999997654333332222221111 0000000
Q ss_pred ----cccccc---cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 399 ----NLVRRE---HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 399 ----~l~~~~---~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+.... ........++..+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 000000123456889999999999999999999975
No 151
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.2e-41 Score=321.40 Aligned_cols=244 Identities=23% Similarity=0.304 Sum_probs=196.2
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
+.++|...+.||+|+||.||+|+.. ++..||||++.... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3468889999999999999999875 67899999986542 2234568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH----~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----TTTCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 999999999999998654 4899999999999999999999 78899999999999999999999999999865432
Q ss_pred CCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
. ......|++.|+|||. ..+.++||||||+++|||++|+.||...........+... .....
T Consensus 162 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---------~~~~~- 227 (279)
T 3fdn_A 162 S----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFTFP- 227 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT---------CCCCC-
T ss_pred c----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhC---------CCCCC-
Confidence 2 1234578999999993 3678999999999999999999999754322221111110 00000
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
..++..+.+++.+|++.+|++||++.|+++.
T Consensus 228 --------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 228 --------DFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --------CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0123457899999999999999999999864
No 152
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4e-41 Score=320.27 Aligned_cols=247 Identities=21% Similarity=0.333 Sum_probs=199.5
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
.++|...+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468889999999999999999875 68999999997543 334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc---EEEeccccccccC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV---AHVSDFGISKLLG 325 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfg~~~~~~ 325 (457)
||+++++|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999887654 4899999999999999999999 678999999999999986655 9999999998764
Q ss_pred CCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 326 EGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 326 ~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
... ......||+.|+|||. .++.++||||||+++|||++|+.||...........+....... .
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------~ 227 (284)
T 3kk8_A 160 DSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---------P 227 (284)
T ss_dssp SSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC---------C
T ss_pred cCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccC---------C
Confidence 322 2234679999999993 36789999999999999999999997644322222221111000 0
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
......++..+.+++.+|++.||++|||+.|+++
T Consensus 228 -----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 228 -----SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -----TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----chhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000112446889999999999999999999986
No 153
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.1e-42 Score=346.75 Aligned_cols=244 Identities=23% Similarity=0.274 Sum_probs=190.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999874 78999999997542 23345678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHAL-APIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
|||+++|+|.+++.... .+++..+..++.|++.||+||| . .+|+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH----SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH----HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh----hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999997654 4899999999999999999999 4 6799999999999999999999999999986432
Q ss_pred CCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
.. .......||+.|+|||. .++.++|||||||++|||++|+.||.......+...+.. ....
T Consensus 302 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~-----------~~~~- 367 (446)
T 4ejn_A 302 DG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----------EEIR- 367 (446)
T ss_dssp -------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------CCCC-
T ss_pred CC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh-----------CCCC-
Confidence 22 22344779999999993 378899999999999999999999976443222221111 1000
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERI-----HTTNAAA 440 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----s~~ev~~ 440 (457)
... ..+..+.+++.+|++.||++|| ++.|+++
T Consensus 368 ~p~------~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 368 FPR------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCT------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCc------cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 000 1234588999999999999999 9999875
No 154
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.3e-41 Score=356.30 Aligned_cols=248 Identities=25% Similarity=0.400 Sum_probs=196.5
Q ss_pred CccCCCCceEEEEEEeC---CCCEEEEEEecccch--hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEeccCC
Q 044428 179 NLLGIGSFGSVYKGTLS---DGTNVAIKIFNLQLE--RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMPN 253 (457)
Q Consensus 179 ~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (457)
+.||+|+||.||+|.+. +++.||||+++.... .....+.+|++++.+++|||||+++++|.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 37999999999999653 567899999976532 335689999999999999999999999965 457899999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc-ce
Q 044428 254 GSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-LI 332 (457)
Q Consensus 254 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~ 332 (457)
|+|.+++.... .+++..+..++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++.+...... ..
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH----~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH----HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 99999998654 4899999999999999999999 678999999999999999999999999999987543322 12
Q ss_pred eccccccccccCCCC----CCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccch
Q 044428 333 QTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSF 407 (457)
Q Consensus 333 ~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~ 407 (457)
.....+|+.|+|||. .++.++|||||||++|||+| |+.||...........+...... .
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~------------~---- 592 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM------------G---- 592 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC------------C----
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC------------C----
Confidence 233557889999993 47889999999999999999 99999765433322222211100 0
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 408 SAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 408 ~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
.+..++..+.+++.+||+.||++||++.+|++.|+++-...
T Consensus 593 -~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 593 -CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 01123567899999999999999999999999999876554
No 155
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-41 Score=332.78 Aligned_cols=239 Identities=22% Similarity=0.280 Sum_probs=194.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (457)
.++|...+.||+|+||.||+|+.. +|+.||+|+++... ......+..|..++..+ +||||+++++++...+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 468999999999999999999986 58899999997642 23455688899999988 79999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999998654 4899999999999999999999 67899999999999999999999999999986432
Q ss_pred CCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
.. .......||+.|+|||.+ ++.++|||||||++|||++|+.||.......+...+. .....
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~-----------~~~~~- 239 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM-----------EHNVA- 239 (353)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-----------HCCCC-
T ss_pred CC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH-----------hCCCC-
Confidence 21 123346799999999933 6789999999999999999999997643222211111 11110
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHT 435 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~ 435 (457)
... .....+.+++.+|++.||++||++
T Consensus 240 ~p~------~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 240 YPK------SMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp CCT------TSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred CCC------CCCHHHHHHHHHHhhcCHHHcCCC
Confidence 000 124468899999999999999964
No 156
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6e-42 Score=328.94 Aligned_cols=248 Identities=23% Similarity=0.313 Sum_probs=195.7
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
.++|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++..++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467888999999999999999986 6899999999876656677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 330 (457)
+++++|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++...... .
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 171 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH----SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--L 171 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--H
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--c
Confidence 9999999999876666999999999999999999999 678999999999999999999999999987643211 0
Q ss_pred ceeccccccccccCCCCC---------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 331 LIQTKTMATIGYMAPEGI---------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 331 ~~~~~~~gt~~y~aPE~~---------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
.......||+.|+|||.+ ++.++||||||+++|||++|+.||................ .+..
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~- 242 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD--------PPTL- 242 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--------CCCC-
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccC--------Cccc-
Confidence 112235689999999943 5779999999999999999999997644221111111100 0000
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
..+..++..+.+++.+|++.||++|||+.|+++
T Consensus 243 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 ------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 001122456889999999999999999999986
No 157
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=331.92 Aligned_cols=253 Identities=23% Similarity=0.266 Sum_probs=186.4
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcC-CCccceeeeeee--------cC
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-HRNLIKILSGCS--------NL 241 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~ 241 (457)
..+|...+.||+|+||.||+|+.. +|+.||||++..........+.+|+.++.+++ ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 357888899999999999999974 78999999997666556678899999999996 999999999883 34
Q ss_pred CeeEEEEeccCCCCHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC--eeeccCCCCCeeecCCCcEEEec
Q 044428 242 DFKALVLEFMPNGSLEKWLYS--HNYFLDILERLNIMIDVGLALEYLHYGHALAP--IIHCDLKPSNILLDENMVAHVSD 317 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~--ivH~dlk~~NIll~~~~~~kl~D 317 (457)
...++||||++ |+|.+++.. ....+++..++.++.|++.||.||| ..+ |+||||||+|||++.++.+||+|
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH----RQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH----TSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----hCCCCEEEccCCcccEEECCCCCEEEec
Confidence 56899999995 899998875 3346999999999999999999999 566 99999999999999999999999
Q ss_pred cccccccCCCCCcc----------eeccccccccccCCCCC-------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcH
Q 044428 318 FGISKLLGEGDDSL----------IQTKTMATIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSL 380 (457)
Q Consensus 318 fg~~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~-------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l 380 (457)
||+++......... ......||+.|+|||.+ ++.++||||||+++|||++|+.||........
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~ 261 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI 261 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh
Confidence 99998765432211 11134589999999965 46689999999999999999999965332111
Q ss_pred HHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 381 KHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
..... ...... .+...+.+++.+|++.||++||++.|+++.|+++.+..
T Consensus 262 ---~~~~~--------~~~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 262 ---VNGKY--------SIPPHD---------TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -------C--------CCCTTC---------CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ---hcCcc--------cCCccc---------ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11000 000000 01234778999999999999999999999999987754
No 158
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.4e-41 Score=328.62 Aligned_cols=241 Identities=22% Similarity=0.306 Sum_probs=176.8
Q ss_pred CCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcC-CCccceeeeeeecCCeeEEEEeccCCCC
Q 044428 178 CNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-HRNLIKILSGCSNLDFKALVLEFMPNGS 255 (457)
Q Consensus 178 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~ 255 (457)
.+.||+|+||.||+|+.. +|+.||||++... ....+.+|+.++..++ ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 368999999999999975 6899999999754 3456788999999997 9999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC---cEEEeccccccccCCCCCcce
Q 044428 256 LEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM---VAHVSDFGISKLLGEGDDSLI 332 (457)
Q Consensus 256 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~---~~kl~Dfg~~~~~~~~~~~~~ 332 (457)
|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++ .+||+|||+++....... .
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~ 165 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH----DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--P 165 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--c
Confidence 999998764 5899999999999999999999 67899999999999997665 899999999987643222 2
Q ss_pred eccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCC----cHHHHHHhhcCchhHHhccccccccc
Q 044428 333 QTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEM----SLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 333 ~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~----~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
.....||+.|+|||.+ ++.++|||||||++|||++|+.||...... ........ +..... .
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--------i~~~~~---~ 234 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK--------IKKGDF---S 234 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH--------HTTTCC---C
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH--------HHcCCC---C
Confidence 2345689999999954 677899999999999999999999763321 11111111 111110 0
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAA 439 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~ 439 (457)
........++..+.+++.+|++.||++|||+.|++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence 01111223456789999999999999999999886
No 159
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-41 Score=326.76 Aligned_cols=257 Identities=20% Similarity=0.258 Sum_probs=197.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch---hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE---RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|...+.||+|+||.||+|+.. +++.||+|++..... .....+.+|+.++.+++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999975 789999999976532 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++++|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH----AAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999998654 4899999999999999999999 678999999999999999999999999999876432
Q ss_pred CCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 328 DDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
.. .......|++.|+|||.+ ++.++||||||+++|||++|+.||.......+...+....+. + .
T Consensus 188 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-------~--~-- 255 (309)
T 2h34_A 188 KL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR-------P--S-- 255 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC-------G--G--
T ss_pred cc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC-------c--c--
Confidence 21 122345689999999954 577999999999999999999999753321111111111100 0 0
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHhHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERI-HTTNAAAKLRKIKVQF 449 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP-s~~ev~~~L~~i~~~~ 449 (457)
.....++..+.+++.+|++.||++|| ++.++++.|+++.+..
T Consensus 256 ----~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 256 ----TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp ----GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred ----ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 00112244688999999999999999 9999999998865443
No 160
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.2e-42 Score=340.97 Aligned_cols=269 Identities=23% Similarity=0.290 Sum_probs=206.1
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCC--eeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD--FKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 248 (457)
++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 57888899999999999999976 58999999997543 234567889999999999999999999987655 779999
Q ss_pred eccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee----cCCCcEEEecccccc
Q 044428 249 EFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL----DENMVAHVSDFGISK 322 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll----~~~~~~kl~Dfg~~~ 322 (457)
||+++|+|.+++.... ..+++..++.++.|++.||+||| ..+|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR----ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH----HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 9999999999998654 33899999999999999999999 6789999999999999 788889999999998
Q ss_pred ccCCCCCcceeccccccccccCCCCC------------CCCccchhhhhHHHHHHhcCCCCCCCCCC-CcHHHHHHh---
Q 044428 323 LLGEGDDSLIQTKTMATIGYMAPEGI------------VSTKCDVYSYGILLLETFSRKKPTNDLGE-MSLKHWVNQ--- 386 (457)
Q Consensus 323 ~~~~~~~~~~~~~~~gt~~y~aPE~~------------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~-~~l~~~~~~--- 386 (457)
...... ......||+.|+|||.+ ++.++|||||||++|||++|+.||..... ......+..
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 764322 22346799999999943 45689999999999999999999975322 111111111
Q ss_pred hcCch-hHHh---cccccc---ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 387 SLPHK-LAEV---VDSNLV---RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 387 ~~~~~-~~~~---~d~~l~---~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
..+.. +..+ ....+. ...............+.+++.+|++.||++||++.|+++.++++.++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11111 1000 000000 00000111234567789999999999999999999999999887543
No 161
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.4e-41 Score=319.35 Aligned_cols=248 Identities=22% Similarity=0.331 Sum_probs=201.0
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
..++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3468899999999999999999975 78999999997543 334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++++|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp ECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 9999999999997653 4899999999999999999999 6789999999999999999999999999998764332
Q ss_pred CcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCc--HHHHHHhhcCchhHHhcccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMS--LKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~--l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
.........|++.|+|||.+ .+.++||||||+++|||++|+.||....... ...|..... ..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------~~ 228 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-----------YL 228 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT-----------TS
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc-----------cc
Confidence 22223446789999999954 2567999999999999999999997644322 112211100 00
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. .....+..+.+++.+|++.||++|||+.|+++
T Consensus 229 ~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 N------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp T------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0 00112445789999999999999999999875
No 162
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=6e-41 Score=318.92 Aligned_cols=254 Identities=21% Similarity=0.287 Sum_probs=200.1
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch------hhHHHHHHHHHHHhhcCCCccceeeeeeecCCee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE------RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 244 (457)
.++|...+.||+|+||.||+|+.. +|+.||+|++..... .....+.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357888999999999999999986 789999999875421 1356789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC----cEEEecccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM----VAHVSDFGI 320 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg~ 320 (457)
++||||+++++|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||+++.++ .+||+|||+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 99999999999999997653 4899999999999999999999 67899999999999998877 899999999
Q ss_pred ccccCCCCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhc
Q 044428 321 SKLLGEGDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396 (457)
Q Consensus 321 ~~~~~~~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 396 (457)
+........ .....|++.|+||| ..++.++||||||+++|||++|+.||...........+......
T Consensus 159 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------ 229 (283)
T 3bhy_A 159 AHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD------ 229 (283)
T ss_dssp CEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC------
T ss_pred ceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC------
Confidence 987643221 23356899999999 33678999999999999999999999764322211111111000
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHHHhHH
Q 044428 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA--KLRKIKV 447 (457)
Q Consensus 397 d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~--~L~~i~~ 447 (457)
........++..+.+++.+|++.||++||++.|+++ .++.++.
T Consensus 230 --------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 230 --------FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp --------CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred --------CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 000011122456889999999999999999999986 4454443
No 163
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.8e-42 Score=327.15 Aligned_cols=255 Identities=25% Similarity=0.413 Sum_probs=193.9
Q ss_pred hcCCcCCccCCCCceEEEEEEeC--CCC--EEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS--DGT--NVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKA 245 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~--~g~--~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (457)
++|+..+.||+|+||.||+|++. +++ .||||+++... ......+.+|++++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57888899999999999999853 333 68999987542 334567899999999999999999999998765 88
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccC
Q 044428 246 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 325 (457)
+|+||+++|+|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH----hCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 999999999999999876566899999999999999999999 6789999999999999999999999999998875
Q ss_pred CCCCcc-eeccccccccccCCCCC----CCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccc
Q 044428 326 EGDDSL-IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSN 399 (457)
Q Consensus 326 ~~~~~~-~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 399 (457)
...... ......+|+.|+|||.+ ++.++||||||+++|||++ |+.||...........+.... ..
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~---------~~ 243 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG---------ER 243 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC---------CC
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccC---------CC
Confidence 433322 22335678899999943 6779999999999999999 999997644322222111100 00
Q ss_pred ccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 400 LVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 400 l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
.. ....++..+.+++.+|++.+|++||++.++++.|+++.+.
T Consensus 244 ~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 244 LP-------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CC-------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 00 0112345689999999999999999999999999987654
No 164
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=330.82 Aligned_cols=240 Identities=25% Similarity=0.350 Sum_probs=197.8
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccch--------hhHHHHHHHHHHHhhcCCCccceeeeeeec
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLE--------RTFVSFNSECEVLRNVRHRNLIKILSGCSN 240 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 240 (457)
...++|...+.||+|+||.||+|+. .+++.||||++..... .....+.+|+.++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 3457899999999999999999986 4789999999975421 133457789999999999999999999999
Q ss_pred CCeeEEEEeccCCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccc
Q 044428 241 LDFKALVLEFMPNG-SLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFG 319 (457)
Q Consensus 241 ~~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 319 (457)
.+..++||||+.+| +|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR----LKDIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEEeccCHHHEEEcCCCcEEEeecc
Confidence 99999999999777 9999998764 4899999999999999999999 6789999999999999999999999999
Q ss_pred cccccCCCCCcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHH
Q 044428 320 ISKLLGEGDDSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394 (457)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~ 394 (457)
+++....... .....||+.|+|||.+ .+.++||||||+++|||++|+.||.....
T Consensus 176 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------------- 235 (335)
T 3dls_A 176 SAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------------- 235 (335)
T ss_dssp TCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------------
T ss_pred cceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------------
Confidence 9987654322 2335699999999943 36789999999999999999999964211
Q ss_pred hccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 395 VVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 395 ~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
.......... .++..+.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~-------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 TVEAAIHPPY-------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp GTTTCCCCSS-------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HHhhccCCCc-------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111000 113458899999999999999999999874
No 165
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.3e-41 Score=328.97 Aligned_cols=253 Identities=29% Similarity=0.455 Sum_probs=199.8
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCE--EEEEEecccc-hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTN--VAIKIFNLQL-ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~--vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 247 (457)
++|...+.||+|+||.||+|+.. +|.. ||+|.+.... ......+.+|++++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888899999999999999864 5654 4999887532 33455789999999999 899999999999999999999
Q ss_pred EeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc
Q 044428 248 LEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV 312 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~ 312 (457)
|||+++|+|.+++.... ..+++..++.++.|++.||.||| ..+|+||||||+||+++.++.
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECGGGC
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCccceEEEcCCCe
Confidence 99999999999998653 36899999999999999999999 678999999999999999999
Q ss_pred EEEeccccccccCCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhh
Q 044428 313 AHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQS 387 (457)
Q Consensus 313 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~ 387 (457)
+||+|||+++..... .......+++.|+|||.+ ++.++||||||+++|||+| |+.||...........+...
T Consensus 181 ~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~ 257 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 257 (327)
T ss_dssp EEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT
T ss_pred EEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC
Confidence 999999999753211 112234578899999943 6889999999999999998 99999764322211111110
Q ss_pred cCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 388 LPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 388 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
.... . +..++..+.+++.+|++.+|++||++.|+++.|.++.++.
T Consensus 258 --------~~~~---~------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 258 --------YRLE---K------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp --------CCCC---C------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred --------CCCC---C------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 0000 0 0122456889999999999999999999999999987654
No 166
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1e-41 Score=327.15 Aligned_cols=257 Identities=25% Similarity=0.348 Sum_probs=184.6
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
..++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++.+++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 3568999999999999999999864 78999999987543 334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhh-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccc
Q 044428 249 EFMPNGSLEKWLYS-------HNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGIS 321 (457)
Q Consensus 249 e~~~~g~L~~~l~~-------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 321 (457)
||+++++|.+++.. ....+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH----KNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH----hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 99999999999974 2345899999999999999999999 678999999999999999999999999999
Q ss_pred cccCCCCCc---ceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhH
Q 044428 322 KLLGEGDDS---LIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLA 393 (457)
Q Consensus 322 ~~~~~~~~~---~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~ 393 (457)
......... .......||+.|+|||. .++.++||||||+++|||++|+.||.....................
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 248 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTT
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccc
Confidence 876433211 11233568999999993 3688999999999999999999999875544333222221111111
Q ss_pred -HhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 394 -EVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 394 -~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
...++.... .++..+.+++.+|++.||++||++.|+++
T Consensus 249 ~~~~~~~~~~---------~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 249 TGVQDKEMLK---------KYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp C-----CCCC---------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccchhhh---------hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111111111 11345889999999999999999999986
No 167
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.4e-41 Score=338.00 Aligned_cols=248 Identities=27% Similarity=0.367 Sum_probs=190.2
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--------hhhHHHHHHHHHHHhhcCCCccceeeeeeec
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--------ERTFVSFNSECEVLRNVRHRNLIKILSGCSN 240 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 240 (457)
...++|...+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 45678999999999999999999875 68999999987542 1122358899999999999999999999754
Q ss_pred CCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCC---CcEEEec
Q 044428 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDEN---MVAHVSD 317 (457)
Q Consensus 241 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~---~~~kl~D 317 (457)
+..++||||+++|+|.+++.... .+++.....++.|++.||+||| ..+|+||||||+|||++.+ +.+||+|
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH----~~~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH----ENGIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEecCCCcceEEEee
Confidence 45799999999999999987654 4899999999999999999999 6779999999999999654 4599999
Q ss_pred cccccccCCCCCcceeccccccccccCCCCC-------CCCccchhhhhHHHHHHhcCCCCCCCCC-CCcHHHHHHhhcC
Q 044428 318 FGISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDLG-EMSLKHWVNQSLP 389 (457)
Q Consensus 318 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~-~~~l~~~~~~~~~ 389 (457)
||+++...... ......||+.|+|||.+ ++.++|||||||++|||+||+.||.... ...+...+.....
T Consensus 286 FG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~ 362 (419)
T 3i6u_A 286 FGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY 362 (419)
T ss_dssp SSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC
T ss_pred cccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC
Confidence 99998764322 22346799999999965 3458999999999999999999997643 2233332222111
Q ss_pred chhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 390 HKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 390 ~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.... .....++..+.+++.+|++.||++||++.|+++
T Consensus 363 ~~~~--------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 363 NFIP--------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CCCH--------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCc--------------hhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1000 011123456889999999999999999999986
No 168
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.4e-42 Score=341.55 Aligned_cols=247 Identities=14% Similarity=0.185 Sum_probs=189.6
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEeccc---chhhHHHHHHHH---HHHhhcCCCccceee-------ee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQ---LERTFVSFNSEC---EVLRNVRHRNLIKIL-------SG 237 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 237 (457)
.++|...+.||+|+||.||+|+. .+|+.||||++... .......+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45788889999999999999996 57999999999743 234456789999 555566899999998 44
Q ss_pred eecCC-----------------eeEEEEeccCCCCHHHHHhhCCC------CCCHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 044428 238 CSNLD-----------------FKALVLEFMPNGSLEKWLYSHNY------FLDILERLNIMIDVGLALEYLHYGHALAP 294 (457)
Q Consensus 238 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ 294 (457)
+...+ ..++||||+ +|+|.+++..... .+++..++.++.|++.||+||| ..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ 226 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH----HYG 226 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH----HTT
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH----hCC
Confidence 44432 378999999 6899999986432 2336888899999999999999 678
Q ss_pred eeeccCCCCCeeecCCCcEEEeccccccccCCCCCcceeccccccccccCCC----C-----------CCCCccchhhhh
Q 044428 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE----G-----------IVSTKCDVYSYG 359 (457)
Q Consensus 295 ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE----~-----------~~~~~~Dv~s~G 359 (457)
|+||||||+|||++.++.+||+|||+++.... ......| +.|+||| . .++.++||||||
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG 300 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALG 300 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHH
Confidence 99999999999999999999999999986432 2234567 9999999 3 578899999999
Q ss_pred HHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 044428 360 ILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAA 439 (457)
Q Consensus 360 vvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~ 439 (457)
|++|||++|+.||........ ...+.. ... .++..+.+++.+||+.||++||++.|++
T Consensus 301 ~il~elltg~~Pf~~~~~~~~-----------~~~~~~-----~~~------~~~~~~~~li~~~L~~dp~~Rpt~~e~l 358 (377)
T 3byv_A 301 LVIYWIWCADLPITKDAALGG-----------SEWIFR-----SCK------NIPQPVRALLEGFLRYPKEDRLLPLQAM 358 (377)
T ss_dssp HHHHHHHHSSCCC------CC-----------SGGGGS-----SCC------CCCHHHHHHHHHHTCSSGGGCCCHHHHH
T ss_pred HHHHHHHHCCCCCcccccccc-----------hhhhhh-----hcc------CCCHHHHHHHHHHcCCCchhCCCHHHHh
Confidence 999999999999965332110 011111 001 1244688999999999999999999999
Q ss_pred H--HHHHhHHHHhh
Q 044428 440 A--KLRKIKVQFLD 451 (457)
Q Consensus 440 ~--~L~~i~~~~~~ 451 (457)
+ .+.++++....
T Consensus 359 ~hp~f~~~~~~~~~ 372 (377)
T 3byv_A 359 ETPEYEQLRTELSA 372 (377)
T ss_dssp TSHHHHHHHHHHHH
T ss_pred hChHHHHHHHHHHH
Confidence 6 56666665443
No 169
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.9e-41 Score=321.03 Aligned_cols=250 Identities=24% Similarity=0.391 Sum_probs=200.3
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeec--------
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN-------- 240 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 240 (457)
...++|+..+.||+|+||.||+|+.. +|+.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 34568999999999999999999986 79999999997543 346789999999999999999998754
Q ss_pred --------CCeeEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC
Q 044428 241 --------LDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM 311 (457)
Q Consensus 241 --------~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~ 311 (457)
....++||||+++|+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+||++++++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH----SKKLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETT
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCCHHHEEEcCCC
Confidence 445899999999999999997643 46899999999999999999999 67899999999999999999
Q ss_pred cEEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhh
Q 044428 312 VAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQS 387 (457)
Q Consensus 312 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~ 387 (457)
.+||+|||+++....... .....|++.|+|||. .++.++||||||+++|||++|..|+... ..+..
T Consensus 160 ~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~~-- 229 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----SKFFT-- 229 (284)
T ss_dssp EEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HHHHH--
T ss_pred CEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HHHHH--
Confidence 999999999987654321 234568999999993 3688999999999999999999886321 11111
Q ss_pred cCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHhhh
Q 044428 388 LPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFLDD 452 (457)
Q Consensus 388 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~~~ 452 (457)
...+..+.. ..+..+.+++.+|++.||++||++.|+++.|+.+++.....
T Consensus 230 ------~~~~~~~~~---------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 230 ------DLRDGIISD---------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp ------HHHTTCCCT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred ------Hhhcccccc---------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 111111110 11345789999999999999999999999999987765543
No 170
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.1e-40 Score=316.42 Aligned_cols=243 Identities=22% Similarity=0.325 Sum_probs=192.7
Q ss_pred cCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeec----CCeeEE
Q 044428 174 EFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSN----LDFKAL 246 (457)
Q Consensus 174 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 246 (457)
.|...+.||+|+||.||+|... ++..||+|++.... ......+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3566678999999999999874 68899999987543 3445678999999999999999999998765 456899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC--eeeccCCCCCeeec-CCCcEEEeccccccc
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAP--IIHCDLKPSNILLD-ENMVAHVSDFGISKL 323 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~--ivH~dlk~~NIll~-~~~~~kl~Dfg~~~~ 323 (457)
||||+++|+|.+++.... .+++..+..++.|++.||.||| ..+ ++||||||+||+++ +++.+||+|||++..
T Consensus 107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH----TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH----cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999998753 4889999999999999999999 556 99999999999997 889999999999976
Q ss_pred cCCCCCcceeccccccccccCCCCC---CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccc
Q 044428 324 LGEGDDSLIQTKTMATIGYMAPEGI---VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 324 ~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 400 (457)
..... .....||+.|+|||.+ ++.++||||||+++|||++|+.||..... ............ .+..
T Consensus 182 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~-----~~~~ 250 (290)
T 1t4h_A 182 KRASF----AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGV-----KPAS 250 (290)
T ss_dssp CCTTS----BEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTTC-----CCGG
T ss_pred ccccc----cccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCc--HHHHHHHHhccC-----Cccc
Confidence 53321 2335689999999943 68899999999999999999999975332 222211111100 0000
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ....+..+.+++.+|++.||++|||+.|+++
T Consensus 251 ~--------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 251 F--------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G--------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c--------CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0 0011345889999999999999999999975
No 171
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.7e-40 Score=338.22 Aligned_cols=260 Identities=20% Similarity=0.249 Sum_probs=205.1
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCC-ccceeeeeeecCCeeEEEEe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHR-NLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e 249 (457)
.++|...+.||+|+||.||+|+. .+++.||||++..... ...+.+|++++..++|+ ++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 36899999999999999999986 5799999998765432 23578899999999875 55555666677888999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee---cCCCcEEEeccccccccCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~~~~ 326 (457)
|+ +++|.+++......+++..++.++.||+.||.||| ..+|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH----~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH----SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 99999999876667999999999999999999999 6789999999999999 6889999999999998654
Q ss_pred CCCcc-----eeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcc
Q 044428 327 GDDSL-----IQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVD 397 (457)
Q Consensus 327 ~~~~~-----~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d 397 (457)
..... ......||+.|+|||.+ ++.++|||||||++|||++|+.||...........+...........+.
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE 238 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH
Confidence 33211 12246799999999943 6789999999999999999999998755433333222211111100000
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHH
Q 044428 398 SNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQ 448 (457)
Q Consensus 398 ~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~ 448 (457)
.....++.++.+++..||+.+|++||++.+|++.|+++..+
T Consensus 239 ----------~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 239 ----------ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp ----------HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ----------HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 00112355789999999999999999999999999998664
No 172
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.5e-41 Score=321.66 Aligned_cols=244 Identities=25% Similarity=0.352 Sum_probs=200.5
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
+.|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 56888899999999999999864 78999999997543 34457799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 330 (457)
+++++|.+++... .+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 102 LGGGSALDLLEPG--PLDETQIATILREILKGLDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp CTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 9999999999764 4899999999999999999999 6789999999999999999999999999998764322
Q ss_pred ceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccc
Q 044428 331 LIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHS 406 (457)
Q Consensus 331 ~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 406 (457)
.......|++.|+|||. .++.++||||||+++|||++|+.||...........+.... .+.+..
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~---- 241 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--------PPTLEG---- 241 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--------CCCCCS----
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCC--------CCCCcc----
Confidence 12234678999999993 36789999999999999999999997644322222211111 111111
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 407 FSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 407 ~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
.++..+.+++.+|++.+|++|||+.|+++.
T Consensus 242 -----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 242 -----NYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp -----SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred -----ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 113458899999999999999999999874
No 173
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.4e-41 Score=342.55 Aligned_cols=248 Identities=24% Similarity=0.337 Sum_probs=200.0
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
..++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++......++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3468999999999999999999975 78999999996542 23456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec---CCCcEEEecccccccc
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD---ENMVAHVSDFGISKLL 324 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~---~~~~~kl~Dfg~~~~~ 324 (457)
|||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++ .++.+||+|||+++..
T Consensus 100 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999999987654 4899999999999999999999 67899999999999995 5668999999999876
Q ss_pred CCCCCcceeccccccccccCCCCC---CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 325 GEGDDSLIQTKTMATIGYMAPEGI---VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
.... ......||+.|+|||.+ ++.++||||+||++|||++|+.||...........+.... ..
T Consensus 175 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-----------~~ 240 (486)
T 3mwu_A 175 QQNT---KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK-----------YA 240 (486)
T ss_dssp CCC-------CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----------CC
T ss_pred CCCC---ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------CC
Confidence 4332 22346799999999944 6789999999999999999999997654322222221110 00
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.....+..++..+.+++.+|++.+|++|||+.|+++
T Consensus 241 ---~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 241 ---FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp ---SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ---CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000111122456889999999999999999999986
No 174
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.2e-41 Score=329.64 Aligned_cols=261 Identities=25% Similarity=0.322 Sum_probs=196.2
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57888899999999999999975 58999999986543 2234567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
|+++++|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++.......
T Consensus 105 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 105 FVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH----SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH----HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999988876543 4899999999999999999999 67899999999999999999999999999987643221
Q ss_pred cceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc---hhHHhc-----
Q 044428 330 SLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH---KLAEVV----- 396 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~---~~~~~~----- 396 (457)
......||+.|+|||. .++.++||||||+++|||++|+.||...........+...... ...+.+
T Consensus 180 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 180 --VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred --ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 2234568999999993 3678999999999999999999999765432222221111110 000100
Q ss_pred -----cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 397 -----DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 397 -----d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+.+............++..+.+++.+|++.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 01111110000111123567899999999999999999999986
No 175
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.4e-41 Score=334.19 Aligned_cols=245 Identities=23% Similarity=0.285 Sum_probs=188.1
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHH-HhhcCCCccceeeeeeecCCeeEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEV-LRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+|..+ ++.++||||+++++++...+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357889999999999999999975 68899999997653 2233456677776 567899999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++.... .+++.....++.||+.||+||| ..+|+||||||+|||++.++++||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH----SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999998754 4788899999999999999999 67899999999999999999999999999986433
Q ss_pred CCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
... ......||+.|+|||.+ ++.++|||||||++|||++|+.||.......+... +....+.
T Consensus 192 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~-----------i~~~~~~- 257 (373)
T 2r5t_A 192 HNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN-----------ILNKPLQ- 257 (373)
T ss_dssp CCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHH-----------HHHSCCC-
T ss_pred CCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH-----------HHhcccC-
Confidence 221 23446799999999943 67899999999999999999999975432211111 1111110
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
... .....+.+++.+|++.||++||++.+.++.
T Consensus 258 ~~~------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 258 LKP------NITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp CCS------SSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred CCC------CCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 000 113457899999999999999998654433
No 176
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=7e-41 Score=322.07 Aligned_cols=246 Identities=24% Similarity=0.332 Sum_probs=196.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
.++|...+.||+|+||.||+++.. +|+.||+|++..........+.+|+.++.+++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 467888999999999999999975 7899999999865444456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee---cCCCcEEEeccccccccCCC
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~~~~~ 327 (457)
+++++|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH----ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH----HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 99999999997654 4889999999999999999999 6789999999999999 78899999999998764322
Q ss_pred CCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 328 DDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
......||+.|+|||.+ ++.++||||||+++|||++|+.||.......+...+...... ...
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~---------~~~- 228 (304)
T 2jam_A 163 ----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYE---------FES- 228 (304)
T ss_dssp ----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCC---------CCT-
T ss_pred ----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC---------CCc-
Confidence 12235689999999955 567899999999999999999999764432222221111100 000
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
......+..+.+++.+|++.||++||++.|+++
T Consensus 229 ----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 229 ----PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ----TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000122456889999999999999999999986
No 177
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-41 Score=331.91 Aligned_cols=265 Identities=26% Similarity=0.336 Sum_probs=195.3
Q ss_pred HHHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchh-----hHHHHHHHHHHHhhcCCCccceeeeeeecCC
Q 044428 169 QRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLER-----TFVSFNSECEVLRNVRHRNLIKILSGCSNLD 242 (457)
Q Consensus 169 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 242 (457)
....++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+|++++++++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 445678999999999999999999975 6899999999753211 1346789999999999999999999999999
Q ss_pred eeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccc
Q 044428 243 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322 (457)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 322 (457)
..++||||+++ +|.+++......+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH----QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH----HCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 99999999975 899999877667889999999999999999999 6779999999999999999999999999998
Q ss_pred ccCCCCCcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc----hhH
Q 044428 323 LLGEGDDSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH----KLA 393 (457)
Q Consensus 323 ~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~----~~~ 393 (457)
....... ......||+.|+|||.+ ++.++|||||||++|||++|..||...........+...... .+.
T Consensus 161 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 161 SFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238 (346)
T ss_dssp TTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred eccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhh
Confidence 7643221 23346789999999943 567899999999999999999998764432222221111100 000
Q ss_pred Hhc---cccccccccc---hhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 394 EVV---DSNLVRREHS---FSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 394 ~~~---d~~l~~~~~~---~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
+.. +......... ......+...+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000 0000000000 0000122456899999999999999999999986
No 178
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.5e-41 Score=337.71 Aligned_cols=243 Identities=21% Similarity=0.302 Sum_probs=185.0
Q ss_pred hcCCcC-CccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhh-cCCCccceeeeeeec----CCeeE
Q 044428 173 NEFDEC-NLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRN-VRHRNLIKILSGCSN----LDFKA 245 (457)
Q Consensus 173 ~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~~ 245 (457)
++|... +.||+|+||.||+++.. +|+.||||++... ..+.+|++++.+ .+||||+++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456655 68999999999999875 7899999998632 346778888754 489999999998865 56789
Q ss_pred EEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC---CCcEEEeccccc
Q 044428 246 LVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE---NMVAHVSDFGIS 321 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfg~~ 321 (457)
+||||+++|+|.+++.... ..+++..+..++.||+.||.||| ..+|+||||||+|||++. ++.+||+|||++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 9999999999999998754 45899999999999999999999 678999999999999997 789999999999
Q ss_pred cccCCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCc----HHHHHHhhcCchhH
Q 044428 322 KLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMS----LKHWVNQSLPHKLA 393 (457)
Q Consensus 322 ~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~----l~~~~~~~~~~~~~ 393 (457)
+...... ......||+.|+|||.+ ++.++|||||||++|||++|+.||....... ....+...
T Consensus 212 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~------ 282 (400)
T 1nxk_A 212 KETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG------ 282 (400)
T ss_dssp EECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHT------
T ss_pred cccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcC------
Confidence 8754322 22346789999999954 6789999999999999999999997643321 11111110
Q ss_pred HhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 394 EVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 394 ~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
..... ......+...+.+++.+|++.||++|||+.|+++.
T Consensus 283 -----~~~~~---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 283 -----QYEFP---NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -----CCCCC---TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----cccCC---CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000 00011234568899999999999999999999863
No 179
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=320.74 Aligned_cols=246 Identities=27% Similarity=0.363 Sum_probs=194.4
Q ss_pred cCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEeccC
Q 044428 174 EFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEFMP 252 (457)
Q Consensus 174 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 252 (457)
+|.....||+|+||.||+|+. .+++.||||.+..........+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455566999999999999986 4788999999987655556779999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC-CCcEEEeccccccccCCCCC
Q 044428 253 NGSLEKWLYSHN--YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE-NMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 253 ~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg~~~~~~~~~~ 329 (457)
+++|.+++.... ..+++..+..++.|++.||.||| ..+++||||||+||+++. ++.+||+|||+++.......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH----DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH----hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999998753 34678889999999999999999 678999999999999987 89999999999987643221
Q ss_pred cceeccccccccccCCCCC------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 330 SLIQTKTMATIGYMAPEGI------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~~------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
......|++.|+|||.+ ++.++||||||+++|||++|+.||..........+.... ....+.+.
T Consensus 179 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~-- 248 (295)
T 2clq_A 179 --CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM------FKVHPEIP-- 248 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH------HCCCCCCC--
T ss_pred --cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc------cccccccc--
Confidence 22345789999999943 678999999999999999999999653322111110000 00011111
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
..++..+.+++.+|++.||++||++.|+++
T Consensus 249 -------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 -------ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -------TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -------ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 112456889999999999999999999975
No 180
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.4e-41 Score=329.71 Aligned_cols=248 Identities=22% Similarity=0.328 Sum_probs=195.8
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEEEE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 248 (457)
..++|+..+.||+|+||.||+++.. +|+.||||++..... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4568999999999999999999875 689999999975432 245688888888 7999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCC----CcEEEecccccccc
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDEN----MVAHVSDFGISKLL 324 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfg~~~~~ 324 (457)
||+++|+|.+++.... .+++.....++.|++.||+||| ..+|+||||||+|||+.++ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH----~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH----AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999998664 4899999999999999999999 6789999999999998433 35999999999876
Q ss_pred CCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccc
Q 044428 325 GEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 400 (457)
..... ......||+.|+|||.+ ++.++|||||||++|||++|+.||................... ..+
T Consensus 171 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~------~~~ 242 (342)
T 2qr7_A 171 RAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK------FSL 242 (342)
T ss_dssp BCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC------CCC
T ss_pred cCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC------ccc
Confidence 44322 22346789999999954 6779999999999999999999997643333322222111000 000
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
... .+......+.+++.+|++.||++||++.|+++
T Consensus 243 ~~~-----~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 243 SGG-----YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CST-----TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred Ccc-----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000 00112456889999999999999999999875
No 181
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1e-40 Score=328.93 Aligned_cols=269 Identities=21% Similarity=0.239 Sum_probs=198.6
Q ss_pred CHHHHHHHhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccch-----------hhHHHHHHHHHHHhhcCCCccc
Q 044428 164 SYLDIQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLE-----------RTFVSFNSECEVLRNVRHRNLI 232 (457)
Q Consensus 164 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----------~~~~~~~~E~~~l~~l~h~niv 232 (457)
...++....++|...+.||+|+||.||+|...+|+.||||++..... .....+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 35677888899999999999999999999988899999999865321 1236789999999999999999
Q ss_pred eeeeeeec-----CCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee
Q 044428 233 KILSGCSN-----LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL 307 (457)
Q Consensus 233 ~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll 307 (457)
++++++.. ....++||||++ |+|.+++......+++..+..++.|++.||.||| ..+|+||||||+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH----EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCcCEecCCChHHEEE
Confidence 99999843 346899999997 7999999877667999999999999999999999 6789999999999999
Q ss_pred cCCCcEEEeccccccccCCCCCcceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHH
Q 044428 308 DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKH 382 (457)
Q Consensus 308 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~ 382 (457)
+.++.+||+|||+++...... ......||+.|+|||. .++.++|||||||++|||++|+.||..........
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 244 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999999999998643322 2234678999999993 36788999999999999999999997644322222
Q ss_pred HHHhhcCc-hh-----------HHhccccccccccc--hhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 383 WVNQSLPH-KL-----------AEVVDSNLVRREHS--FSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 383 ~~~~~~~~-~~-----------~~~~d~~l~~~~~~--~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+...... .. .+.+...+...... ......+...+.+++.+|++.||++|||+.|+++
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 22111111 01 11111111110000 0001122456889999999999999999999975
No 182
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.2e-41 Score=344.70 Aligned_cols=247 Identities=25% Similarity=0.373 Sum_probs=202.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467889999999999999999975 78999999986542 33456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee---cCCCcEEEecccccccc
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL---DENMVAHVSDFGISKLL 324 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~~ 324 (457)
|||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||+ +.++.+||+|||+++..
T Consensus 105 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999999998654 4899999999999999999999 6789999999999999 56789999999999876
Q ss_pred CCCCCcceeccccccccccCCC---CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 325 GEGDDSLIQTKTMATIGYMAPE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE---~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
..... .....||+.|+||| ..++.++||||+||++|||++|+.||...........+.... ..
T Consensus 180 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-----------~~ 245 (484)
T 3nyv_A 180 EASKK---MKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK-----------YT 245 (484)
T ss_dssp CCCCS---HHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----------CC
T ss_pred ccccc---cccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC-----------CC
Confidence 54322 23457999999999 447889999999999999999999997654333222222110 00
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.....+..++..+.+++.+|++.+|++|||+.|+++
T Consensus 246 ---~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 246 ---FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp ---CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 000111123456889999999999999999999985
No 183
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=319.55 Aligned_cols=247 Identities=21% Similarity=0.270 Sum_probs=195.4
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc----hhhHHHHHHHHHHHhhcCCCccceeeeee--ecCCee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL----ERTFVSFNSECEVLRNVRHRNLIKILSGC--SNLDFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~ 244 (457)
.++|...+.||+|+||.||++... +++.||+|++.... ......+.+|++++++++||||+++++++ .+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999974 78999999997543 23456789999999999999999999998 445688
Q ss_pred EEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 245 ALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
++||||++++ |.+++... ...+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH----~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH----SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999876 77777654 356899999999999999999999 67899999999999999999999999999987
Q ss_pred cCCCCCcceeccccccccccCCCCC------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcc
Q 044428 324 LGEGDDSLIQTKTMATIGYMAPEGI------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVD 397 (457)
Q Consensus 324 ~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d 397 (457)
..............||+.|+|||.. .+.++||||||+++|||++|+.||...........+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~--------- 229 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS--------- 229 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC---------
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCC---------
Confidence 6543333333456799999999943 2568999999999999999999997643221111111100
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 398 SNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 398 ~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
..+. .+++..+.+++.+|++.||++|||+.|+++.
T Consensus 230 ~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 YAIP---------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCC---------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCC---------CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 1124568899999999999999999999863
No 184
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.6e-41 Score=327.79 Aligned_cols=264 Identities=21% Similarity=0.317 Sum_probs=199.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeec--------
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSN-------- 240 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 240 (457)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36889999999999999999997 478999999986543 2234567899999999999999999999876
Q ss_pred CCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccc
Q 044428 241 LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGI 320 (457)
Q Consensus 241 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 320 (457)
.+..++||||++ |+|.+.+......+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH----RNKILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 346899999997 5888888776666999999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCc--ceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc---
Q 044428 321 SKLLGEGDDS--LIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH--- 390 (457)
Q Consensus 321 ~~~~~~~~~~--~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~--- 390 (457)
++........ .......||+.|+|||.+ ++.++|||||||++|||+||+.||...........+......
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 9876432221 122346789999999933 578999999999999999999999875443333333222111
Q ss_pred h-hHHhccccc------c-ccccchhHH---HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 391 K-LAEVVDSNL------V-RREHSFSAK---MDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 391 ~-~~~~~d~~l------~-~~~~~~~~~---~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ....-.... . ......... ......+.+++.+|++.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 1 111100000 0 000000000 011345789999999999999999999976
No 185
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.5e-40 Score=337.98 Aligned_cols=258 Identities=22% Similarity=0.228 Sum_probs=190.4
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCccceeeeeeecC------C
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQ--LERTFVSFNSECEVLRNVRHRNLIKILSGCSNL------D 242 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 242 (457)
.++|+..+.||+|+||.||+|+.. +|+.||||++... .......+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467899999999999999999865 6899999999754 233456788999999999999999999998654 4
Q ss_pred eeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccc
Q 044428 243 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322 (457)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 322 (457)
..++||||+++ +|.+.+.. .+++..+..++.|++.||+||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH----~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 67999999965 57666654 3889999999999999999999 6789999999999999999999999999998
Q ss_pred ccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch-------
Q 044428 323 LLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK------- 391 (457)
Q Consensus 323 ~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~------- 391 (457)
...... ..+...||+.|+|||. .++.++||||+||++|||++|+.||...+..+....+.......
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 213 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred ecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 764321 2344679999999994 36789999999999999999999997654322222221111110
Q ss_pred ----hHHhccccccccc-------------cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 392 ----LAEVVDSNLVRRE-------------HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 392 ----~~~~~d~~l~~~~-------------~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
....+........ ............+.+++.+|++.||++|||+.|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0111110000000 000111222556899999999999999999999976
No 186
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-41 Score=330.17 Aligned_cols=257 Identities=23% Similarity=0.298 Sum_probs=191.2
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCC------
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD------ 242 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 242 (457)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 357888899999999999999874 79999999986532 333567889999999999999999999987653
Q ss_pred eeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccc
Q 044428 243 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322 (457)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 322 (457)
..++||||+ +++|.+++.... +++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~--l~~~~~~~~~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHEK--LGEDRIQFLVYQMLKGLRYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHH----HCCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 469999999 899999998753 899999999999999999999 6789999999999999999999999999998
Q ss_pred ccCCCCCcceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch---hHH
Q 044428 323 LLGEGDDSLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK---LAE 394 (457)
Q Consensus 323 ~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~---~~~ 394 (457)
..... .....+|+.|+|||. .++.++||||+||+++||++|+.||...+..+....+....... ...
T Consensus 177 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 177 QADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp ECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 75432 234678999999993 47889999999999999999999997654332222221111110 000
Q ss_pred hcc--------cccccc-ccch-hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 395 VVD--------SNLVRR-EHSF-SAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 395 ~~d--------~~l~~~-~~~~-~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+. ..+... .... .....+...+.+++.+|++.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 000 000000 0000 000122456889999999999999999999986
No 187
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.5e-40 Score=342.26 Aligned_cols=248 Identities=23% Similarity=0.328 Sum_probs=198.5
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch-------------hhHHHHHHHHHHHhhcCCCccceeee
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE-------------RTFVSFNSECEVLRNVRHRNLIKILS 236 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 236 (457)
..++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3568999999999999999999975 688999999875421 23457889999999999999999999
Q ss_pred eeecCCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC---cE
Q 044428 237 GCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM---VA 313 (457)
Q Consensus 237 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~---~~ 313 (457)
++.+....++||||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++.++ .+
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH----KHNIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCcHHHEEEecCCCCccE
Confidence 9999999999999999999999997654 4899999999999999999999 67899999999999998776 69
Q ss_pred EEeccccccccCCCCCcceeccccccccccCCC---CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc
Q 044428 314 HVSDFGISKLLGEGDDSLIQTKTMATIGYMAPE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH 390 (457)
Q Consensus 314 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE---~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~ 390 (457)
||+|||+++...... ......||+.|+||| ..++.++||||+||++|||++|+.||.......+...+....
T Consensus 189 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-- 263 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGK-- 263 (504)
T ss_dssp EECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--
T ss_pred EEEECCCCEEcCCCC---ccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--
Confidence 999999998765432 223467999999999 347889999999999999999999997654322222221110
Q ss_pred hhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 391 KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 391 ~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ......+...+..+.+++.+|++.||.+|||+.|+++
T Consensus 264 ---------~---~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 264 ---------Y---YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp ---------C---CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---------C---CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 0001111223456899999999999999999999975
No 188
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-40 Score=338.53 Aligned_cols=190 Identities=26% Similarity=0.395 Sum_probs=150.4
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeec-----CCee
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSN-----LDFK 244 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~ 244 (457)
++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 67999999999999999999865 78999999986532 3345678999999999999999999999843 3578
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
++||||+ +|+|.+++.... .+++..+..++.||+.||.||| ..+|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH----~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH----SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH----hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 9999998 579999997654 5899999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCCc-------------------------ceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcC
Q 044428 325 GEGDDS-------------------------LIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSR 368 (457)
Q Consensus 325 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg 368 (457)
...... ...+...||+.|+|||.+ ++.++|||||||++|||+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 432111 112345789999999943 67899999999999999993
No 189
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8.8e-41 Score=343.05 Aligned_cols=247 Identities=23% Similarity=0.312 Sum_probs=195.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
.++|...+.||+|+||.||+|+.. ++..||+|++.... ......+.+|+.+++.++||||+++++++......++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457889999999999999999975 78999999997543 233567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC---CCcEEEeccccccccC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE---NMVAHVSDFGISKLLG 325 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfg~~~~~~ 325 (457)
||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++. ++.+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH----KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 9999999999887653 4899999999999999999999 678999999999999975 4569999999998765
Q ss_pred CCCCcceeccccccccccCCC---CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccc
Q 044428 326 EGDDSLIQTKTMATIGYMAPE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 326 ~~~~~~~~~~~~gt~~y~aPE---~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
... ......||+.|+||| ..++.++||||+||++|||++|+.||.......+...+...... .
T Consensus 191 ~~~---~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~---------~-- 256 (494)
T 3lij_A 191 NQK---KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT---------F-- 256 (494)
T ss_dssp TTB---CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---------C--
T ss_pred CCc---cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---------C--
Confidence 332 223467999999999 34788999999999999999999999765432222222111000 0
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.......++..+.+++.+|++.+|++|||+.|+++
T Consensus 257 ---~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 257 ---DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp ---CSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---CchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 00011122456889999999999999999999985
No 190
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.5e-41 Score=326.64 Aligned_cols=263 Identities=22% Similarity=0.280 Sum_probs=190.4
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch--hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE--RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
...++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++...+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34578999999999999999999864 789999999975432 224567899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee-----cCCCcEEEeccccc
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL-----DENMVAHVSDFGIS 321 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll-----~~~~~~kl~Dfg~~ 321 (457)
||||++ |+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||+ +.++.+||+|||++
T Consensus 111 v~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH----SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 999997 59999998765 4899999999999999999999 6789999999999999 45566999999999
Q ss_pred cccCCCCCcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcC--ch--h
Q 044428 322 KLLGEGDDSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP--HK--L 392 (457)
Q Consensus 322 ~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~--~~--~ 392 (457)
+....... ......||+.|+|||.+ ++.++|||||||++|||++|+.||...........+..... .. .
T Consensus 185 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 185 RAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred cccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhh
Confidence 87643221 22345689999999932 67899999999999999999999976443222221111100 00 0
Q ss_pred HHhc-----cccc---cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 393 AEVV-----DSNL---VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 393 ~~~~-----d~~l---~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.... .... ............+...+.+++.+|++.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 0000 0000000000112456889999999999999999999975
No 191
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.1e-40 Score=315.86 Aligned_cols=242 Identities=25% Similarity=0.402 Sum_probs=190.5
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888899999999999999986 79999999997543 223457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++++|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp ECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH----HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred eccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999998654 4899999999999999999999 6679999999999999999999999999998764322
Q ss_pred CcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
......|++.|+|||.+ .+.++||||||+++|||++|+.||...........+... ....
T Consensus 166 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------~~~~ 230 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG------------VFYI 230 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------------CCCC
T ss_pred ---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC------------cccC
Confidence 12335689999999954 246899999999999999999999764322221111110 0000
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ..+...+.+++.+|++.||++|||+.|+++
T Consensus 231 ~------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 231 P------EYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp C------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred c------hhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0 011345889999999999999999999986
No 192
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.8e-40 Score=315.97 Aligned_cols=241 Identities=24% Similarity=0.322 Sum_probs=197.7
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|...+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57888899999999999999875 67899999986542 223457899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++|+|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH----ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999998754 4899999999999999999999 7889999999999999999999999999987654321
Q ss_pred CcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccc
Q 044428 329 DSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRRE 404 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 404 (457)
.....|++.|+|||. .++.++||||||+++|||++|+.||........... +...... ..
T Consensus 169 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-----------~~~~~~~-~~ 232 (284)
T 2vgo_A 169 ----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR-----------IVNVDLK-FP 232 (284)
T ss_dssp ----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-----------HHTTCCC-CC
T ss_pred ----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH-----------HhccccC-CC
Confidence 234578999999993 367899999999999999999999976432211111 1111110 00
Q ss_pred cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 405 HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 405 ~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ..+..+.+++.+|++.+|++||++.|+++
T Consensus 233 ~------~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 233 P------FLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp T------TSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C------cCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 0 11345789999999999999999999975
No 193
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.2e-40 Score=318.70 Aligned_cols=245 Identities=20% Similarity=0.250 Sum_probs=198.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|...+.||+|+||.||+++.. +++.||+|++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357888899999999999999976 68899999987542 23456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++++|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999987654 4899999999999999999999 678999999999999999999999999999876432
Q ss_pred CCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 328 DDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
.. ......||+.|+|||.+ .+.++||||||+++|||++|+.||...........+. ..... .
T Consensus 169 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-----------~~~~~-~ 234 (294)
T 2rku_A 169 GE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-----------KNEYS-I 234 (294)
T ss_dssp TC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-----------TTCCC-C
T ss_pred cc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-----------hccCC-C
Confidence 21 12346789999999933 6779999999999999999999997643211111111 10000 0
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
. ......+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 P------KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp C------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred c------cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 0113457899999999999999999999863
No 194
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.1e-41 Score=345.37 Aligned_cols=248 Identities=25% Similarity=0.331 Sum_probs=199.7
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++.+++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888899999999999999875 79999999997542 23345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 248 LEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
|||+++|+|.+++.... ..+++..+..++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH----~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH----RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999999998654 34899999999999999999999 67899999999999999999999999999987654
Q ss_pred CCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVR 402 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~ 402 (457)
... .....||+.|+|||.+ ++.++|||||||++|||++|+.||...........+. ..+......
T Consensus 339 ~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~--------~~i~~~~~~ 407 (576)
T 2acx_A 339 GQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE--------RLVKEVPEE 407 (576)
T ss_dssp TCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHH--------HHHHHCCCC
T ss_pred Ccc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHH--------HHhhccccc
Confidence 322 2345799999999943 6789999999999999999999998643221111111 100000000
Q ss_pred cccchhHHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 044428 403 REHSFSAKMDCLLRIMNLALDCCMESPDERI-----HTTNAAA 440 (457)
Q Consensus 403 ~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----s~~ev~~ 440 (457)
... .....+.+++.+|++.||++|| ++.||++
T Consensus 408 ~p~------~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 408 YSE------RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CCT------TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred CCc------cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 000 1134588999999999999999 6788764
No 195
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=329.62 Aligned_cols=256 Identities=23% Similarity=0.349 Sum_probs=197.2
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
.++|...+.||+|+||.||+|+..+ .+|+|++.... ......+.+|+.++++++||||+++++++...+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4678889999999999999999753 59999987542 2234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
|+++++|.+++......+++..+..++.|++.||.||| ..+++||||||+||+++ ++.+||+|||+++.......
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH----AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH----HTTCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 99999999999887767899999999999999999999 67899999999999998 67999999999876532111
Q ss_pred ---cceeccccccccccCCCCC-------------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhH
Q 044428 330 ---SLIQTKTMATIGYMAPEGI-------------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLA 393 (457)
Q Consensus 330 ---~~~~~~~~gt~~y~aPE~~-------------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~ 393 (457)
........|++.|+|||.+ ++.++||||||+++|||++|+.||...........+...
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~------ 258 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG------ 258 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT------
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC------
Confidence 1122235689999999943 467899999999999999999999764322221111111
Q ss_pred HhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHHh
Q 044428 394 EVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQFL 450 (457)
Q Consensus 394 ~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~~ 450 (457)
..+..... .++..+.+++.+|++.+|++|||+.++++.|+++.++..
T Consensus 259 --~~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 259 --MKPNLSQI--------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp --CCCCCCCS--------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred --CCCCCCcC--------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11111110 113358899999999999999999999999999887653
No 196
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.5e-41 Score=320.81 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=196.6
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeee--cCCeeEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCS--NLDFKAL 246 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 246 (457)
.++|+..+.||+|+||.||+++.. +|+.||+|++.... ......+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467888999999999999999875 78999999997543 334567899999999999999999999874 4678999
Q ss_pred EEeccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeccCCCCCeeecCCCcEEEecccccc
Q 044428 247 VLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGLALEYLHYGH-ALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~-~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 322 (457)
||||+++|+|.+++.... ..+++..++.++.|++.||.|||... ...+++||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 999999999999997532 44899999999999999999999432 01229999999999999999999999999998
Q ss_pred ccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccc
Q 044428 323 LLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398 (457)
Q Consensus 323 ~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~ 398 (457)
....... ......|++.|+|||. .++.++||||||+++|||++|+.||.......+...+..... +
T Consensus 165 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~--------~ 234 (279)
T 2w5a_A 165 ILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF--------R 234 (279)
T ss_dssp HC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--------C
T ss_pred eeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccc--------c
Confidence 7643221 1223568999999993 367899999999999999999999976543222222211110 0
Q ss_pred cccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 044428 399 NLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKL 442 (457)
Q Consensus 399 ~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L 442 (457)
.+. ..++..+.+++.+|++.+|++||++.|+++.+
T Consensus 235 ~~~---------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 235 RIP---------YRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp CCC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred cCC---------cccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 110 01245688999999999999999999998754
No 197
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=321.40 Aligned_cols=247 Identities=26% Similarity=0.327 Sum_probs=195.4
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
..++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+|+.++.+++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567899999999999999999875 68999999997543 34578899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCC
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 329 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 329 (457)
|+++|+|.+++......+++..+..++.+++.||.||| ..+++|+||||+||+++.++.+||+|||++........
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH----FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999999865556899999999999999999999 67899999999999999999999999999987643211
Q ss_pred cceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccccc
Q 044428 330 SLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREH 405 (457)
Q Consensus 330 ~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 405 (457)
......|++.|+|||. .++.++||||||+++|||++|+.||................ .+...
T Consensus 181 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~---- 246 (314)
T 3com_A 181 --KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP--------PPTFR---- 246 (314)
T ss_dssp --CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--------CCCCS----
T ss_pred --ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC--------CcccC----
Confidence 2234578999999993 36789999999999999999999997643221111111110 00000
Q ss_pred chhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 406 SFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 406 ~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+..++..+.+++.+|++.||++|||+.++++
T Consensus 247 ---~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 247 ---KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 01112456889999999999999999999975
No 198
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.2e-41 Score=332.39 Aligned_cols=259 Identities=23% Similarity=0.318 Sum_probs=198.2
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEec
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (457)
++|...+.||+|+||.||+|+.. +|..||+|++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 57888899999999999999975 78999999997653 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCc
Q 044428 251 MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 330 (457)
Q Consensus 251 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 330 (457)
+++|+|.+++.... .+++..+..++.+++.||.|||+. .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREK---HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHH---HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHh---CCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999998754 488999999999999999999942 26999999999999999999999999999765321
Q ss_pred ceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcC-----------------
Q 044428 331 LIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP----------------- 389 (457)
Q Consensus 331 ~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~----------------- 389 (457)
......||+.|+|||.+ ++.++||||||+++|||++|+.||.......+.........
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 12335789999999933 67799999999999999999999976432222111100000
Q ss_pred ----------chhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 390 ----------HKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 390 ----------~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
....+..+.......... ....++..+.+++.+|++.||++|||+.|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPPKL-PSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCCCC-CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCCCcccchhhhhHHhccCCCCC-CcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 001111111111100000 00112446889999999999999999999986
No 199
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.4e-40 Score=324.66 Aligned_cols=244 Identities=20% Similarity=0.255 Sum_probs=198.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
.++|...+.||+|+||.||+++.. +++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 367888899999999999999975 68899999987542 23456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++++|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH----HCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999987653 4899999999999999999999 678999999999999999999999999999876432
Q ss_pred CCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccccc
Q 044428 328 DDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRR 403 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 403 (457)
.. ......||+.|+|||. .++.++||||||+++|||++|+.||...........+... ...+..
T Consensus 195 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---------~~~~~~- 262 (335)
T 2owb_A 195 GE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN---------EYSIPK- 262 (335)
T ss_dssp TC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT---------CCCCCT-
T ss_pred cc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC---------CCCCCc-
Confidence 21 1234678999999993 3678999999999999999999999754321111111100 000000
Q ss_pred ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 404 EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 404 ~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+...+.+++.+|++.||++||++.|+++
T Consensus 263 --------~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 263 --------HINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp --------TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11345789999999999999999999976
No 200
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.2e-41 Score=329.09 Aligned_cols=258 Identities=23% Similarity=0.281 Sum_probs=200.5
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhh-----------------HHHHHHHHHHHhhcCCCcccee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERT-----------------FVSFNSECEVLRNVRHRNLIKI 234 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 234 (457)
.++|...+.||+|+||.||+|+. +|+.||||++....... ...+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36888999999999999999999 89999999997543211 1679999999999999999999
Q ss_pred eeeeecCCeeEEEEeccCCCCHHHH------HhhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CCeeeccCCCCCee
Q 044428 235 LSGCSNLDFKALVLEFMPNGSLEKW------LYSH-NYFLDILERLNIMIDVGLALEYLHYGHAL-APIIHCDLKPSNIL 306 (457)
Q Consensus 235 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~~ivH~dlk~~NIl 306 (457)
++++...+..++||||+++|+|.++ +... ...+++..+..++.|++.||.||| . .+++||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH----NEKNICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH----HTSCEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh----ccCCEeecCCChHhEE
Confidence 9999999999999999999999998 6553 356899999999999999999999 5 78999999999999
Q ss_pred ecCCCcEEEeccccccccCCCCCcceeccccccccccCCCCCCC-----C-ccchhhhhHHHHHHhcCCCCCCCCCC-Cc
Q 044428 307 LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVS-----T-KCDVYSYGILLLETFSRKKPTNDLGE-MS 379 (457)
Q Consensus 307 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~-~~Dv~s~Gvvl~el~tg~~p~~~~~~-~~ 379 (457)
++.++.+||+|||.+...... ......|++.|+|||.+.. . ++||||||+++|||++|+.||..... ..
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 260 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE 260 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred EcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence 999999999999999876432 2344679999999995532 3 89999999999999999999986543 22
Q ss_pred HHHHHHhhcCchh---HHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 380 LKHWVNQSLPHKL---AEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 380 l~~~~~~~~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
....+........ .....+.. ... .......++..+.+++.+|++.||++||++.|+++
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLT-NKK-STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTC-C---------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHhccCcCCccchhhhhcccc-ccc-cccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2222221110000 00000000 000 00001123456899999999999999999999987
No 201
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.9e-40 Score=317.92 Aligned_cols=248 Identities=25% Similarity=0.323 Sum_probs=200.1
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---------hhhHHHHHHHHHHHhhcC-CCccceeeeeee
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---------ERTFVSFNSECEVLRNVR-HRNLIKILSGCS 239 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 239 (457)
..++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++.+++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578899999999999999999975 68999999986532 123456889999999996 999999999999
Q ss_pred cCCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccc
Q 044428 240 NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFG 319 (457)
Q Consensus 240 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 319 (457)
..+..++||||+++++|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 9999999999999999999998653 4899999999999999999999 6789999999999999999999999999
Q ss_pred cccccCCCCCcceeccccccccccCCCCC----------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcC
Q 044428 320 ISKLLGEGDDSLIQTKTMATIGYMAPEGI----------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLP 389 (457)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~ 389 (457)
++........ .....|++.|+|||.+ ++.++||||||+++|||++|+.||...........+....
T Consensus 170 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~- 245 (298)
T 1phk_A 170 FSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN- 245 (298)
T ss_dssp TCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-
T ss_pred chhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCC-
Confidence 9987654322 2345689999999943 5779999999999999999999997643222221111110
Q ss_pred chhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 390 HKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 390 ~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.... ......++..+.+++.+|++.||++|||+.|+++
T Consensus 246 ----------~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 246 ----------YQFG---SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ----------CCCC---TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ----------cccC---cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0000 0001123456899999999999999999999975
No 202
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.7e-40 Score=350.83 Aligned_cols=255 Identities=22% Similarity=0.348 Sum_probs=202.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC----CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS----DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
.++|...+.||+|+||.||+|++. .+..||||.+.... ......+.+|+.++++++||||+++++++. .+..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 466778889999999999999874 24679999987543 334567999999999999999999999985 456899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCC
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGE 326 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 326 (457)
||||+++|+|.+++......+++..++.++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 99999999999999887667999999999999999999999 67899999999999999999999999999987643
Q ss_pred CCCcceeccccccccccCCC----CCCCCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 327 GDDSLIQTKTMATIGYMAPE----GIVSTKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 327 ~~~~~~~~~~~gt~~y~aPE----~~~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
... .......+|+.|+||| ..++.++|||||||++|||++ |..||...........+..... ..+
T Consensus 544 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~--------~~~- 613 (656)
T 2j0j_A 544 STY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER--------LPM- 613 (656)
T ss_dssp -----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCC--------CCC-
T ss_pred Ccc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC--------CCC-
Confidence 322 1223355788999999 347889999999999999997 9999976543322222221110 000
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
+..++..+.+++.+||+.||++||++.++++.|+++.++.
T Consensus 614 --------~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 614 --------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 1123456899999999999999999999999999987653
No 203
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.1e-40 Score=315.44 Aligned_cols=240 Identities=21% Similarity=0.293 Sum_probs=194.0
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (457)
..++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4578999999999999999999986 79999999997542 33456788999999999 99999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC--------------
Q 044428 247 VLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE-------------- 309 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~-------------- 309 (457)
||||+++|+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH----SMSLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH----hCCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 999999999999998642 45899999999999999999999 678999999999999984
Q ss_pred -----CCcEEEeccccccccCCCCCcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCc
Q 044428 310 -----NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMS 379 (457)
Q Consensus 310 -----~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~ 379 (457)
...+||+|||.+....... ...||+.|+|||.+ .+.++||||||+++|||++|..|+....
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--- 235 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--- 235 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---
T ss_pred cccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---
Confidence 4479999999998764322 24589999999943 3468999999999999999998764321
Q ss_pred HHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 380 LKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 380 l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
....+. ......... .++..+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~-----------~~~~~~~~~------~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 QWHEIR-----------QGRLPRIPQ------VLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHHHHH-----------TTCCCCCSS------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHH-----------cCCCCCCCc------ccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111111 111100000 12346889999999999999999999975
No 204
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.4e-40 Score=328.40 Aligned_cols=262 Identities=23% Similarity=0.274 Sum_probs=200.5
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecC-----Cee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNL-----DFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 244 (457)
.++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457899999999999999999875 78899999997543 33346789999999999999999999998654 468
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
++||||++ |+|.+++.... +++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHH----HCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999996 69999998754 899999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCCcc-eeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccc
Q 044428 325 GEGDDSL-IQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDS 398 (457)
Q Consensus 325 ~~~~~~~-~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~ 398 (457)
....... ......||+.|+|||.+ ++.++|||||||++|||++|+.||......+....+.........+.+..
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 258 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHT
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 4322111 12345799999999932 68899999999999999999999987654444433322221111100000
Q ss_pred -----------cccc-cccch-hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 399 -----------NLVR-REHSF-SAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 399 -----------~l~~-~~~~~-~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+.. ..... .....+...+.+++.+|++.||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 00000 000112456889999999999999999999975
No 205
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-41 Score=331.33 Aligned_cols=250 Identities=25% Similarity=0.314 Sum_probs=198.5
Q ss_pred hhcCCcCCccCCCCceEEEEEEe----CCCCEEEEEEecccc----hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCC
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL----SDGTNVAIKIFNLQL----ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLD 242 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 242 (457)
.++|...+.||+|+||.||+++. .+|+.||||+++... ......+.+|++++.++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36789999999999999999987 378999999987542 23345677899999999 6999999999999999
Q ss_pred eeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccc
Q 044428 243 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322 (457)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 322 (457)
..++||||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999998654 4899999999999999999999 6789999999999999999999999999998
Q ss_pred ccCCCCCcceeccccccccccCCCCC------CCCccchhhhhHHHHHHhcCCCCCCCCCCC-cHHHHHHhhcCchhHHh
Q 044428 323 LLGEGDDSLIQTKTMATIGYMAPEGI------VSTKCDVYSYGILLLETFSRKKPTNDLGEM-SLKHWVNQSLPHKLAEV 395 (457)
Q Consensus 323 ~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~-~l~~~~~~~~~~~~~~~ 395 (457)
....... .......||+.|+|||.+ ++.++|||||||++|||++|+.||...... .........
T Consensus 208 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~-------- 278 (355)
T 1vzo_A 208 EFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI-------- 278 (355)
T ss_dssp ECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH--------
T ss_pred ecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHH--------
Confidence 7533221 122345799999999943 467899999999999999999999754322 222211111
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 044428 396 VDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERI-----HTTNAAAKL 442 (457)
Q Consensus 396 ~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP-----s~~ev~~~L 442 (457)
.... ... +.+++..+.+++.+|++.||++|| ++.|+++..
T Consensus 279 ~~~~-~~~------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 279 LKSE-PPY------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHCC-CCC------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred hccC-CCC------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0000 000 011244578999999999999999 899987643
No 206
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=321.93 Aligned_cols=261 Identities=20% Similarity=0.293 Sum_probs=191.5
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeee------------
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS------------ 239 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~------------ 239 (457)
++|...+.||+|+||.||+|+.. +|+.||||++..........+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 57888899999999999999986 58999999998766666678999999999999999999998873
Q ss_pred --cCCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec-CCCcEEEe
Q 044428 240 --NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD-ENMVAHVS 316 (457)
Q Consensus 240 --~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~-~~~~~kl~ 316 (457)
.....++||||++ |+|.+++... .+++..+..++.|++.||+||| ..+|+||||||+||+++ +++.+||+
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH----SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999997 6999999764 4889999999999999999999 67899999999999997 57799999
Q ss_pred ccccccccCCCCCc-ceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc
Q 044428 317 DFGISKLLGEGDDS-LIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH 390 (457)
Q Consensus 317 Dfg~~~~~~~~~~~-~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~ 390 (457)
|||+++........ .......+|..|+|||. .++.++||||||+++|||++|+.||...........+....+.
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999876432111 11233567899999993 3677899999999999999999999865433222222222111
Q ss_pred h----hHHhc-------cccccccccch-hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 391 K----LAEVV-------DSNLVRREHSF-SAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 391 ~----~~~~~-------d~~l~~~~~~~-~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. ..+.. ........... .....++..+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0 00100 00000000000 000123556899999999999999999999975
No 207
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.3e-40 Score=323.68 Aligned_cols=258 Identities=19% Similarity=0.257 Sum_probs=201.2
Q ss_pred ccCHHHHHHHhhcCCcC-CccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcC-CCccceeee
Q 044428 162 RISYLDIQRATNEFDEC-NLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVR-HRNLIKILS 236 (457)
Q Consensus 162 ~~~~~~l~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~ 236 (457)
++.+.......+.|... +.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++..++ ||||+++++
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 34445556667778877 78999999999999875 68999999997643 233567899999999995 699999999
Q ss_pred eeecCCeeEEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC---CCc
Q 044428 237 GCSNLDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE---NMV 312 (457)
Q Consensus 237 ~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~---~~~ 312 (457)
++...+..++||||+++|+|.+++... ...+++..+..++.|++.||+||| ..+|+||||||+||+++. ++.
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH----~~givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH----QNNIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESCBTTBCC
T ss_pred EEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCcCChHHEEEecCCCCCc
Confidence 999999999999999999999998654 356899999999999999999999 678999999999999987 789
Q ss_pred EEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhc
Q 044428 313 AHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSL 388 (457)
Q Consensus 313 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~ 388 (457)
+||+|||+++....... .....||+.|+|||. .++.++||||||+++|||++|+.||...........+....
T Consensus 173 ~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~ 249 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN 249 (327)
T ss_dssp EEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred EEEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc
Confidence 99999999987643221 233579999999993 36789999999999999999999997644322211111110
Q ss_pred CchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 389 PHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 389 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.. ... .....++..+.+++.+|++.||++|||+.|+++
T Consensus 250 ~~---------~~~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 250 VD---------YSE-----ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp CC---------CCT-----TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cc---------cCc-----hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 00 000 001122456889999999999999999999975
No 208
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.9e-40 Score=333.47 Aligned_cols=196 Identities=27% Similarity=0.358 Sum_probs=163.3
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecC-----Ce
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNL-----DF 243 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 243 (457)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 368889999999999999999875 68899999997542 33456789999999999999999999998765 57
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 244 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
.++||||++ |+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH----~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH----ESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH----HCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 899999996 69999998653 4899999999999999999999 67899999999999999999999999999997
Q ss_pred cCCCCCc--------------------ceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCC
Q 044428 324 LGEGDDS--------------------LIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTN 373 (457)
Q Consensus 324 ~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~ 373 (457)
....... ...+...||+.|+|||.+ ++.++||||+||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 6443211 112456799999999943 6789999999999999998655543
No 209
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.9e-40 Score=324.72 Aligned_cols=257 Identities=22% Similarity=0.235 Sum_probs=187.5
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCC------e
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD------F 243 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 243 (457)
++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57888999999999999999865 78999999997542 334567889999999999999999999987654 7
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 244 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
.++||||++ |+|.+++.. .+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred eEEEEEcCC-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH----HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 899999996 578888863 3889999999999999999999 67899999999999999999999999999987
Q ss_pred cCCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch--------
Q 044428 324 LGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK-------- 391 (457)
Q Consensus 324 ~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~-------- 391 (457)
..... ......||+.|+|||.+ ++.++|||||||++|||++|+.||...........+.......
T Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 54321 22346789999999933 6789999999999999999999997644322222111111110
Q ss_pred ---hHHhcccc--ccc-----------cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 392 ---LAEVVDSN--LVR-----------REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 392 ---~~~~~d~~--l~~-----------~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
....+... ... ..............+.+++.+|++.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00000000 000 00001112233567899999999999999999999986
No 210
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.7e-40 Score=319.71 Aligned_cols=247 Identities=28% Similarity=0.371 Sum_probs=194.1
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--------hhhHHHHHHHHHHHhhcCCCccceeeeeeecC
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--------ERTFVSFNSECEVLRNVRHRNLIKILSGCSNL 241 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 241 (457)
..++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4568999999999999999999875 68899999986532 11234588999999999999999999998766
Q ss_pred CeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc---EEEecc
Q 044428 242 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV---AHVSDF 318 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~---~kl~Df 318 (457)
+ .++||||+++|+|.+++.... .+++.....++.|++.||.||| ..+|+||||||+||+++.++. +||+||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH----ENGIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 5 899999999999999997654 5899999999999999999999 678999999999999987654 999999
Q ss_pred ccccccCCCCCcceeccccccccccCCCCC-------CCCccchhhhhHHHHHHhcCCCCCCCCCC-CcHHHHHHhhcCc
Q 044428 319 GISKLLGEGDDSLIQTKTMATIGYMAPEGI-------VSTKCDVYSYGILLLETFSRKKPTNDLGE-MSLKHWVNQSLPH 390 (457)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~-~~l~~~~~~~~~~ 390 (457)
|+++...... ......||+.|+|||.+ ++.++||||||+++|||++|+.||..... ..+...+......
T Consensus 162 g~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (322)
T 2ycf_A 162 GHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238 (322)
T ss_dssp TTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC
T ss_pred ccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc
Confidence 9998764321 12235689999999943 57799999999999999999999976432 2333322221111
Q ss_pred hhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 391 KLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 391 ~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
...+ ...+++..+.+++.+|++.||++||++.|+++
T Consensus 239 ~~~~--------------~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 FIPE--------------VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCHH--------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCch--------------hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0000 01122456889999999999999999999985
No 211
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.2e-40 Score=317.57 Aligned_cols=261 Identities=24% Similarity=0.340 Sum_probs=196.9
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch--hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE--RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
++|+..+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888899999999999999975 789999999875432 234578899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 250 FMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
|++ |+|.+++.... ..+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH----SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 997 69999998764 45889999999999999999999 6789999999999999999999999999998764322
Q ss_pred CcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc--h--hHHh----
Q 044428 329 DSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH--K--LAEV---- 395 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~--~--~~~~---- 395 (457)
. ......+|+.|+|||.+ .+.++||||||+++|||+||+.||......+....+...... . +...
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 158 R--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp B--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred c--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCc
Confidence 1 22335689999999932 578899999999999999999999765432222211111110 0 0000
Q ss_pred -cccccccc-ccchh-HHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 396 -VDSNLVRR-EHSFS-AKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 396 -~d~~l~~~-~~~~~-~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
..+.+... ..... .....+..+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 00000 00112456889999999999999999999975
No 212
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9.6e-40 Score=317.69 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=193.9
Q ss_pred hcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhcC-CCccceeeeeeec--CCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-HRNLIKILSGCSN--LDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~ 248 (457)
++|+..+.||+|+||.||+|+. .+++.||||++.... ...+.+|+.++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 6788899999999999999986 578999999987433 456889999999997 9999999999987 66789999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCC-cEEEeccccccccCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENM-VAHVSDFGISKLLGEG 327 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg~~~~~~~~ 327 (457)
||+++++|.+++.. +++..+..++.|++.||+||| ..+|+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH----SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999864 788999999999999999999 67899999999999999776 8999999999876543
Q ss_pred CCcceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCC-cHHHHHHhhcC-chhHHhccc--
Q 044428 328 DDSLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEM-SLKHWVNQSLP-HKLAEVVDS-- 398 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~-~l~~~~~~~~~-~~~~~~~d~-- 398 (457)
.. .....|+..|+|||. .++.++|||||||++|||++|+.||...... .....+..... ....+.++.
T Consensus 185 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 QE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp CC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred Cc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 22 234578999999993 3678999999999999999999999543211 11111111100 001111110
Q ss_pred -------------ccccc---ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 399 -------------NLVRR---EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 399 -------------~l~~~---~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
..... .............+.+++.+|++.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 0000001113456899999999999999999999975
No 213
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1e-40 Score=326.05 Aligned_cols=247 Identities=23% Similarity=0.301 Sum_probs=192.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccc-hhhHHHHHHHHHH-HhhcCCCccceeeeeeecCCeeEEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQL-ERTFVSFNSECEV-LRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ......+..|..+ ++.++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45788888999999999999987 478999999997643 2233455566655 77889999999999999999999999
Q ss_pred eccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccC
Q 044428 249 EFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325 (457)
Q Consensus 249 e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 325 (457)
||+++ +|.+++.. ....+++..+..++.|++.||.|||.. .+|+||||||+||+++.++.+||+|||+++...
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK---LSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc---CCeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99975 99988874 345699999999999999999999932 279999999999999999999999999998764
Q ss_pred CCCCcceeccccccccccCCCC--------CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcc
Q 044428 326 EGDDSLIQTKTMATIGYMAPEG--------IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVD 397 (457)
Q Consensus 326 ~~~~~~~~~~~~gt~~y~aPE~--------~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d 397 (457)
.. .......||+.|+|||. .++.++|||||||++|||+||+.||..... .. ..+. ..+.
T Consensus 206 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-~~-~~~~--------~~~~ 272 (340)
T 3an0_A 206 DS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-PF-QQLK--------QVVE 272 (340)
T ss_dssp CH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-HH-HHHH--------HHHH
T ss_pred cc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-hH-HHHH--------HHhc
Confidence 32 11223579999999995 257799999999999999999999975321 11 1111 1111
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 398 SNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 398 ~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
....... ...++..+.+++.+|++.||++||++.|+++
T Consensus 273 ~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 273 EPSPQLP-----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp SCCCCCC-----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCC-----cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1000000 0112456899999999999999999999986
No 214
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=9.2e-41 Score=318.67 Aligned_cols=246 Identities=23% Similarity=0.286 Sum_probs=182.8
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccch--hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLE--RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.++...++.++||||+++++++...+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46788999999999999999997 4789999999976432 22333455556688889999999999999999999999
Q ss_pred eccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-CeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 249 EFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGLALEYLHYGHALA-PIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 249 e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
||++ |+|.+++.. ....+++..+..++.|++.||.||| .. +++||||||+||+++.++.+||+|||+++..
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH----SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh----hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9997 588887764 3456999999999999999999999 44 7999999999999999999999999999876
Q ss_pred CCCCCcceeccccccccccCCCCC--------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhc
Q 044428 325 GEGDDSLIQTKTMATIGYMAPEGI--------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE~~--------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 396 (457)
.... ......||+.|+|||.+ ++.++||||||+++|||+||+.||..... .... .. ...
T Consensus 161 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~-~~--------~~~ 227 (290)
T 3fme_A 161 VDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-PFQQ-LK--------QVV 227 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-HHHH-HH--------HHH
T ss_pred cccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-hHHH-HH--------HHh
Confidence 4322 12335689999999953 56789999999999999999999975321 1111 11 111
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 397 d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
........ ...++..+.+++.+|++.||++|||+.|+++
T Consensus 228 ~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 228 EEPSPQLP-----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HSCCCCCC-----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccCCCCcc-----cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11110000 0112446889999999999999999999986
No 215
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-40 Score=329.69 Aligned_cols=267 Identities=20% Similarity=0.251 Sum_probs=195.3
Q ss_pred HHHhhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeec-------
Q 044428 169 QRATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN------- 240 (457)
Q Consensus 169 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 240 (457)
....++|...+.||+|+||.||+|+. .+|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999986 5799999999865432 23479999999999999999998843
Q ss_pred -------------------------------CCeeEEEEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHH
Q 044428 241 -------------------------------LDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGLALEYL 286 (457)
Q Consensus 241 -------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~L 286 (457)
....++||||++ |+|.+.+.. ....+++..+..++.|++.||.||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334889999997 688877763 335689999999999999999999
Q ss_pred HhcCCCCCeeeccCCCCCeeec-CCCcEEEeccccccccCCCCCcceeccccccccccCCCC-----CCCCccchhhhhH
Q 044428 287 HYGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGI 360 (457)
Q Consensus 287 H~~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gv 360 (457)
| ..+|+||||||+||+++ .++.+||+|||+++.+..... .....||+.|+|||. .++.++||||+||
T Consensus 158 H----~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 158 H----SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp H----TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred H----HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 9 78899999999999998 689999999999987644322 234568999999993 2678999999999
Q ss_pred HHHHHhcCCCCCCCCCCCcHHHHHHhhcCch-hHHhc--cc--------cccccccchhHHHHHHHHHHHHHHhccCCCC
Q 044428 361 LLLETFSRKKPTNDLGEMSLKHWVNQSLPHK-LAEVV--DS--------NLVRREHSFSAKMDCLLRIMNLALDCCMESP 429 (457)
Q Consensus 361 vl~el~tg~~p~~~~~~~~l~~~~~~~~~~~-~~~~~--d~--------~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P 429 (457)
++|||++|+.||......+....+....... ..++. ++ .+.........+..++..+.+++.+|++.||
T Consensus 231 il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 9999999999998654333222222111111 11000 00 0000000000011124568999999999999
Q ss_pred CCCCCHHHHHH--HHHHhHH
Q 044428 430 DERIHTTNAAA--KLRKIKV 447 (457)
Q Consensus 430 ~~RPs~~ev~~--~L~~i~~ 447 (457)
++|||+.|+++ .+.+++.
T Consensus 311 ~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 311 DLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp GGSCCHHHHHTSGGGHHHHH
T ss_pred hhCCCHHHHhcCHHHHHHHh
Confidence 99999999984 3444444
No 216
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.2e-40 Score=337.40 Aligned_cols=242 Identities=23% Similarity=0.331 Sum_probs=196.0
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 67888899999999999999985 79999999997543 233467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccC
Q 044428 249 EFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 325 (457)
||+++|+|.+++.... ..+++.....++.||+.||.||| ..+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH----~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH----QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH----HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999997643 45899999999999999999999 6789999999999999999999999999998765
Q ss_pred CCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCC-cHHHHHHhhcCchhHHhccccc
Q 044428 326 EGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEM-SLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 326 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~-~l~~~~~~~~~~~~~~~~d~~l 400 (457)
.... ......||+.|+|||.+ ++.++|||||||++|||+||+.||...... ........ +.....
T Consensus 341 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~--------i~~~~~ 410 (543)
T 3c4z_A 341 AGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR--------VLEQAV 410 (543)
T ss_dssp TTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHH--------HHHCCC
T ss_pred CCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHH--------Hhhccc
Confidence 4322 12335799999999943 678999999999999999999999764321 11111111 111111
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCH
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHT 435 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~ 435 (457)
. .. ...+..+.+++.+|++.||++||++
T Consensus 411 ~-~p------~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 411 T-YP------DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp C-CC------TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred C-CC------cccCHHHHHHHHHhccCCHhHCCCC
Confidence 0 00 1124468899999999999999975
No 217
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=325.47 Aligned_cols=256 Identities=25% Similarity=0.337 Sum_probs=197.2
Q ss_pred ccCHHHHHHHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhc-CCCccceeeeeee
Q 044428 162 RISYLDIQRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNV-RHRNLIKILSGCS 239 (457)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 239 (457)
.+++.++....++|...+.||+|+||.||+|+.. +|+.||||++.... .....+.+|+.++.++ +||||+++++++.
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 3444455566788999999999999999999974 78999999987543 2346788999999999 7999999999987
Q ss_pred c------CCeeEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc
Q 044428 240 N------LDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV 312 (457)
Q Consensus 240 ~------~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~ 312 (457)
. .+..++||||+++|+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+||+++.++.
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH----QHKVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTCC
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCcHHHEEEcCCCC
Confidence 6 468899999999999999998753 45889999999999999999999 678999999999999999999
Q ss_pred EEEeccccccccCCCCCcceeccccccccccCCCCC---------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHH
Q 044428 313 AHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI---------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHW 383 (457)
Q Consensus 313 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~ 383 (457)
+||+|||++........ ......||+.|+|||.+ ++.++||||||+++|||++|+.||...........
T Consensus 168 ~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 245 (326)
T ss_dssp EEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred EEEeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 99999999987643211 12335689999999943 57789999999999999999999976442221111
Q ss_pred HHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 384 VNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 384 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
+... ..+.+... .++..+.+++.+|++.||++||++.++++
T Consensus 246 ~~~~--------~~~~~~~~--------~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 246 IPRN--------PAPRLKSK--------KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHS--------CCCCCSCS--------CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhcC--------ccccCCcc--------ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1110 00111111 11346889999999999999999999987
No 218
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.3e-41 Score=332.91 Aligned_cols=262 Identities=10% Similarity=0.091 Sum_probs=183.8
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch---hhHHHHHHHHHHHhhc--CCCccceee-------eeee
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE---RTFVSFNSECEVLRNV--RHRNLIKIL-------SGCS 239 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~ 239 (457)
.+|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+.++..+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45788899999999999999975 789999999987532 3345677885555444 699988755 3332
Q ss_pred cC-----------------CeeEEEEeccCCCCHHHHHhhCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCCee
Q 044428 240 NL-----------------DFKALVLEFMPNGSLEKWLYSHNYFLDILER------LNIMIDVGLALEYLHYGHALAPII 296 (457)
Q Consensus 240 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~~iv 296 (457)
.. ...++||||++ |+|.+++......+++..+ +.++.|++.||+||| ..+|+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH----~~~iv 216 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ----SKGLV 216 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH----HTTEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH----HCCCc
Confidence 22 34799999998 9999999875444566666 788899999999999 67899
Q ss_pred eccCCCCCeeecCCCcEEEeccccccccCCCCCcceeccccccccccCCCCC------CCCccchhhhhHHHHHHhcCCC
Q 044428 297 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI------VSTKCDVYSYGILLLETFSRKK 370 (457)
Q Consensus 297 H~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~~Dv~s~Gvvl~el~tg~~ 370 (457)
||||||+|||++.++.+||+|||+++..... .....+|+.|+|||.+ ++.++|||||||++|||+||+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999876321 1135577999999933 5779999999999999999999
Q ss_pred CCCCCCCCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHHHhHHH
Q 044428 371 PTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA--KLRKIKVQ 448 (457)
Q Consensus 371 p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~--~L~~i~~~ 448 (457)
||..........|... ........... ......++..+.+++.+||+.||++|||+.|+++ .+.++...
T Consensus 292 Pf~~~~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 362 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRP----SLRVPGTDSLA-----FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNE 362 (371)
T ss_dssp STTBCCTTCTTCCCBC----CTTSCCCCSCC-----CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHH
T ss_pred CCCCcCcccccchhhh----hhhhccccccc-----hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHH
Confidence 9976432110000000 00000000000 0001123456899999999999999999999984 56666666
Q ss_pred Hhhhh
Q 044428 449 FLDDV 453 (457)
Q Consensus 449 ~~~~~ 453 (457)
.....
T Consensus 363 ~~~~~ 367 (371)
T 3q60_A 363 ISSSL 367 (371)
T ss_dssp HHHHH
T ss_pred Hhhhh
Confidence 55443
No 219
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.2e-40 Score=315.69 Aligned_cols=249 Identities=25% Similarity=0.307 Sum_probs=189.0
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeec---------
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN--------- 240 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 240 (457)
..++|+..+.||+|+||.||+|+.. +|+.||||++... ......+.+|+.++++++||||+++++++..
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 4578999999999999999999974 7999999999654 3345678999999999999999999998754
Q ss_pred ----CCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEe
Q 044428 241 ----LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVS 316 (457)
Q Consensus 241 ----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~ 316 (457)
....++||||+++|+|.+++......+++..++.++.|++.||.||| ..+++||||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH----hCCeecccCCHHhEEEcCCCCEEEe
Confidence 45789999999999999999977666888999999999999999999 6789999999999999999999999
Q ss_pred ccccccccCCCCC------------cceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCc
Q 044428 317 DFGISKLLGEGDD------------SLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMS 379 (457)
Q Consensus 317 Dfg~~~~~~~~~~------------~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~ 379 (457)
|||+++....... ........||+.|+|||. .++.++||||||+++|||++ ||.... +
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--~ 233 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--E 233 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--H
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--h
Confidence 9999987643211 111233568999999993 36789999999999999998 553211 1
Q ss_pred HHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 380 LKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 380 l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
......... . ....+.... ...++..+.+++.+|++.||++|||+.++++
T Consensus 234 ~~~~~~~~~-----~-~~~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 234 RVNILKKLR-----S-VSIEFPPDF-----DDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHHH-----S-TTCCCCTTC-----CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHhcc-----c-cccccCccc-----cccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111100 0 000010000 1122455789999999999999999999986
No 220
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.5e-40 Score=331.58 Aligned_cols=195 Identities=25% Similarity=0.304 Sum_probs=167.4
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhc------CCCccceeeeeeecCCee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNV------RHRNLIKILSGCSNLDFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 244 (457)
..+|+..+.||+|+||.||+|+.. +++.||||++.... .....+.+|++++..+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 357888999999999999999875 68999999997542 3345677888888877 577999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc--EEEeccccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV--AHVSDFGIS 321 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~--~kl~Dfg~~ 321 (457)
++||||++ ++|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+|||++.++. +||+|||++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH----KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 99999995 79999998765 45899999999999999999999 667999999999999999887 999999999
Q ss_pred cccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCC
Q 044428 322 KLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGE 377 (457)
Q Consensus 322 ~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~ 377 (457)
+..... .....||+.|+|||. .++.++|||||||++|||+||+.||.....
T Consensus 250 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 250 CYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred eecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 765332 223578999999994 378899999999999999999999976543
No 221
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.2e-40 Score=329.04 Aligned_cols=257 Identities=23% Similarity=0.300 Sum_probs=179.7
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecC------C
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNL------D 242 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 242 (457)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36888999999999999999986 478999999997542 33456788999999999999999999998654 5
Q ss_pred eeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccc
Q 044428 243 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322 (457)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 322 (457)
..++|+||+ +++|.+++... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 679999999 78999998764 4899999999999999999999 6789999999999999999999999999998
Q ss_pred ccCCCCCcceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcc
Q 044428 323 LLGEGDDSLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVD 397 (457)
Q Consensus 323 ~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d 397 (457)
..... .....||+.|+|||. .++.++|||||||++|||++|+.||...+..+....+.........+.+.
T Consensus 181 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 181 HTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred ccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 75322 234578999999993 36789999999999999999999997654333222222211111000000
Q ss_pred -----------ccccc-cccchh-HHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 398 -----------SNLVR-REHSFS-AKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 398 -----------~~l~~-~~~~~~-~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
..+.. ...... ....+...+.+++.+|++.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00000 000000 00112345889999999999999999999975
No 222
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.1e-40 Score=347.65 Aligned_cols=240 Identities=22% Similarity=0.278 Sum_probs=195.7
Q ss_pred HhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeE
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKA 245 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 245 (457)
..++|+..+.||+|+||.||+|+.. +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3468999999999999999999875 68899999997542 33455678899999988 7999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccC
Q 044428 246 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLG 325 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 325 (457)
+||||+++|+|.+++.... .+++..+..++.||+.||+||| ..+|+||||||+|||++.++++||+|||+++...
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999998754 4899999999999999999999 6789999999999999999999999999998643
Q ss_pred CCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 326 EGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 326 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
.... ......||+.|+|||.+ ++.++|||||||++|||++|+.||...+...+...+ ....+.
T Consensus 494 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i-----------~~~~~~ 560 (674)
T 3pfq_A 494 WDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI-----------MEHNVA 560 (674)
T ss_dssp CTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-----------HSSCCC
T ss_pred cCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHH-----------HhCCCC
Confidence 2221 23457799999999933 688999999999999999999999764432222111 111110
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHT 435 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~ 435 (457)
... .....+.+++.+|++.||++||++
T Consensus 561 -~p~------~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 561 -YPK------SMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp -CCT------TSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred -CCc------cCCHHHHHHHHHHccCCHHHCCCC
Confidence 000 124468899999999999999997
No 223
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8.9e-40 Score=318.46 Aligned_cols=258 Identities=22% Similarity=0.277 Sum_probs=198.2
Q ss_pred hhcCCcCCccCCCCceEEEEEEe--CCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCc------cceeeeeeecCCe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL--SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRN------LIKILSGCSNLDF 243 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 243 (457)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++..++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35788899999999999999986 368899999997542 34567889999999887654 9999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC-------------
Q 044428 244 KALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE------------- 309 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~------------- 309 (457)
.++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH----SNKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 99999999 899999998765 45889999999999999999999 678999999999999987
Q ss_pred ------CCcEEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCc
Q 044428 310 ------NMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMS 379 (457)
Q Consensus 310 ------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~ 379 (457)
++.+||+|||+++..... .....||+.|+|||. .++.++||||||+++|||++|+.||.......
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred ccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 678999999999875432 233578999999993 36889999999999999999999998654333
Q ss_pred HHHHHHhhcCchhHHhcc----cc------cccc----------------ccchhHHHHHHHHHHHHHHhccCCCCCCCC
Q 044428 380 LKHWVNQSLPHKLAEVVD----SN------LVRR----------------EHSFSAKMDCLLRIMNLALDCCMESPDERI 433 (457)
Q Consensus 380 l~~~~~~~~~~~~~~~~d----~~------l~~~----------------~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP 433 (457)
....+.........+... .. .... .........+...+.+++.+|++.||++||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 322222221110000000 00 0000 000000113466789999999999999999
Q ss_pred CHHHHHH
Q 044428 434 HTTNAAA 440 (457)
Q Consensus 434 s~~ev~~ 440 (457)
|+.|+++
T Consensus 322 t~~ell~ 328 (339)
T 1z57_A 322 TLREALK 328 (339)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999975
No 224
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.1e-40 Score=316.36 Aligned_cols=252 Identities=23% Similarity=0.328 Sum_probs=194.0
Q ss_pred HHHHhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccc--hhhHHHHHHHHHHHhhcC--CCccceeeeeeecCCe
Q 044428 168 IQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVR--HRNLIKILSGCSNLDF 243 (457)
Q Consensus 168 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~ 243 (457)
+....++|...+.||+|+||.||+++..+++.||||++.... ......+.+|++++.+++ ||||+++++++...+.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 334456789999999999999999999889999999997542 334567899999999997 5999999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 244 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
.++||| +.+++|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||++++ +.+||+|||+++.
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred EEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcccEEEEC-CeEEEeecccccc
Confidence 999999 56899999998764 5899999999999999999999 678999999999999964 8999999999987
Q ss_pred cCCCCCcceeccccccccccCCCC---------------CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhc
Q 044428 324 LGEGDDSLIQTKTMATIGYMAPEG---------------IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSL 388 (457)
Q Consensus 324 ~~~~~~~~~~~~~~gt~~y~aPE~---------------~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~ 388 (457)
..............||+.|+|||. .++.++||||||+++|||++|+.||...... ....
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~---- 249 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKL---- 249 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH--HHHH----
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH--HHHH----
Confidence 654333222334678999999994 3566899999999999999999999753221 1111
Q ss_pred CchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 044428 389 PHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAAK 441 (457)
Q Consensus 389 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~ 441 (457)
...+++........ .++..+.+++.+|++.||++||++.|+++.
T Consensus 250 ----~~~~~~~~~~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 250 ----HAIIDPNHEIEFPD-----IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ----HHHHCTTSCCCCCC-----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----HHHHhcccccCCcc-----cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11222211111110 113458899999999999999999999863
No 225
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1e-39 Score=311.28 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=200.2
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEE
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (457)
...++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999975 78999999987543 2345678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC---CCcEEEeccccccc
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE---NMVAHVSDFGISKL 323 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfg~~~~ 323 (457)
||||+++++|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||+++. ++.+||+|||++..
T Consensus 99 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 999999999999887654 4899999999999999999999 678999999999999975 44799999999987
Q ss_pred cCCCCCcceeccccccccccCCC---CCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccc
Q 044428 324 LGEGDDSLIQTKTMATIGYMAPE---GIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNL 400 (457)
Q Consensus 324 ~~~~~~~~~~~~~~gt~~y~aPE---~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 400 (457)
...... .....+++.|+||| ..++.++||||||+++|||++|+.||...........+.... .
T Consensus 174 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----------~ 239 (287)
T 2wei_A 174 FQQNTK---MKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK-----------Y 239 (287)
T ss_dssp BCCCSS---CSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----------C
T ss_pred ecCCCc---cccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------C
Confidence 643321 22345899999999 347889999999999999999999997644322222111110 0
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 401 VRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 401 ~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.. .......++..+.+++.+|++.+|++|||+.|+++
T Consensus 240 ~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 240 AF---DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CC---CSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CC---CchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 00011122456889999999999999999999986
No 226
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=9e-40 Score=325.74 Aligned_cols=258 Identities=22% Similarity=0.279 Sum_probs=193.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcC--------CCccceeeeeee---
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVR--------HRNLIKILSGCS--- 239 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 239 (457)
.++|...+.||+|+||.||+|+.. +++.||||++... ......+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999864 7889999999754 234567889999999986 788999999887
Q ss_pred -cCCeeEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCC-CeeeccCCCCCeeecCCC-----
Q 044428 240 -NLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALA-PIIHCDLKPSNILLDENM----- 311 (457)
Q Consensus 240 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-~ivH~dlk~~NIll~~~~----- 311 (457)
.....++||||+ +++|.+++.... ..+++..+..++.|++.||.||| .. +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH----~~~givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH----TKCRIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH----HTTCEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----HhCCEecCCCCHHHeeEeccchhhhh
Confidence 566899999999 566666665443 56899999999999999999999 55 799999999999999775
Q ss_pred --------------------------------------------cEEEeccccccccCCCCCcceeccccccccccCCCC
Q 044428 312 --------------------------------------------VAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG 347 (457)
Q Consensus 312 --------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 347 (457)
.+||+|||+++..... .....||+.|+|||.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChh
Confidence 7999999999876432 233578999999993
Q ss_pred C----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcH------HHHHHhhcCc---hh-------HHhcccc--c---cc
Q 044428 348 I----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSL------KHWVNQSLPH---KL-------AEVVDSN--L---VR 402 (457)
Q Consensus 348 ~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l------~~~~~~~~~~---~~-------~~~~d~~--l---~~ 402 (457)
+ ++.++|||||||++|||+||+.||........ ...+...... .. .+.+... + ..
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 3 78899999999999999999999976433221 1111111100 00 0000000 0 00
Q ss_pred c-c--------cchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 403 R-E--------HSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 403 ~-~--------~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. . .......+....+.+++.+|++.||++|||+.|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 0 000012345677999999999999999999999975
No 227
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.7e-40 Score=322.32 Aligned_cols=261 Identities=25% Similarity=0.263 Sum_probs=195.6
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecC-----Cee
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNL-----DFK 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 244 (457)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467888999999999999999975 78999999997543 33455788999999999999999999987654 678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
++||||++ |+|.+++... .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999996 6999999875 3899999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCCcc--------eeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc-
Q 044428 325 GEGDDSL--------IQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH- 390 (457)
Q Consensus 325 ~~~~~~~--------~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~- 390 (457)
....... ......||+.|+|||. .++.++|||||||++|||++|+.||...........+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 4322111 1123568999999993 3677899999999999999999999765422222111111000
Q ss_pred ------------hhHHhccccccccc-cc-hhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 391 ------------KLAEVVDSNLVRRE-HS-FSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 391 ------------~~~~~~d~~l~~~~-~~-~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
...+.+.. +.... .. ......++..+.+++.+|++.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKS-LPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHT-SCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred chhccccccccchhhHHhhc-ccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00011000 00000 00 0001123456889999999999999999999975
No 228
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.8e-40 Score=317.29 Aligned_cols=263 Identities=24% Similarity=0.326 Sum_probs=196.8
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEe--CCCCEEEEEEecccch--hhHHHHHHHHHHHhhc---CCCccceeeeeee---
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTL--SDGTNVAIKIFNLQLE--RTFVSFNSECEVLRNV---RHRNLIKILSGCS--- 239 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~--- 239 (457)
.+.++|...+.||+|+||.||+|+. .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3457899999999999999999997 4688999999875432 2233567788877776 8999999999987
Q ss_pred --cCCeeEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEe
Q 044428 240 --NLDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVS 316 (457)
Q Consensus 240 --~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~ 316 (457)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCCHHHeEEcCCCCEEEe
Confidence 5667899999997 69999998754 44899999999999999999999 6789999999999999999999999
Q ss_pred ccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch-
Q 044428 317 DFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK- 391 (457)
Q Consensus 317 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~- 391 (457)
|||+++..... .......||+.|+|||. .++.++||||||+++|||++|+.||...........+.......
T Consensus 163 Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (326)
T 1blx_A 163 DFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239 (326)
T ss_dssp SCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cCcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 99999865321 12234678999999993 36889999999999999999999997654333222222111100
Q ss_pred ---hHHhcc-c--cccc--cccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 392 ---LAEVVD-S--NLVR--REHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 392 ---~~~~~d-~--~l~~--~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
+..... + .... ..........++..+.+++.+|++.||++||++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000 0 0000 00000000122456889999999999999999999974
No 229
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.2e-39 Score=324.99 Aligned_cols=257 Identities=25% Similarity=0.346 Sum_probs=189.3
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCC------eeEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLD------FKAL 246 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~l 246 (457)
.+|...+.||+|+||.||+|+..++..||+|++..... ...+|+++++.++||||+++++++.... ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46888899999999999999997777799998864322 2246999999999999999999985433 3789
Q ss_pred EEeccCCCCHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec-CCCcEEEeccccccc
Q 044428 247 VLEFMPNGSLEKWLY--SHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD-ENMVAHVSDFGISKL 323 (457)
Q Consensus 247 v~e~~~~g~L~~~l~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg~~~~ 323 (457)
||||++++.+..... .....+++..+..++.|++.||+||| ..+|+||||||+|||++ .++.+||+|||+++.
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999998654443332 22356899999999999999999999 67899999999999999 899999999999987
Q ss_pred cCCCCCcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCch-h--HHh
Q 044428 324 LGEGDDSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHK-L--AEV 395 (457)
Q Consensus 324 ~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~-~--~~~ 395 (457)
...... .....||+.|+|||.+ ++.++|||||||++|||++|+.||......+....+....... . ...
T Consensus 192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 192 LIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 644322 2345789999999932 6789999999999999999999997654332222221111110 0 011
Q ss_pred ccccccccc------cchh--HHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 396 VDSNLVRRE------HSFS--AKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 396 ~d~~l~~~~------~~~~--~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.++...... .... .....+..+.+++.+|++.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 111110000 0000 00112456899999999999999999999975
No 230
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.3e-39 Score=322.18 Aligned_cols=256 Identities=21% Similarity=0.264 Sum_probs=191.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCee----
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFK---- 244 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 244 (457)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357888899999999999999875 78999999997643 33356788999999999999999999999877654
Q ss_pred --EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccc
Q 044428 245 --ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322 (457)
Q Consensus 245 --~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 322 (457)
++||||++ ++|.+++.. .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999996 788888753 3899999999999999999999 6789999999999999999999999999998
Q ss_pred ccCCCCCcceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHh--
Q 044428 323 LLGEGDDSLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEV-- 395 (457)
Q Consensus 323 ~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~-- 395 (457)
..... .....||+.|+|||. .++.++|||||||++|||++|+.||...........+.........+.
T Consensus 193 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 193 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred ccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 65332 234578999999993 367899999999999999999999976443222222211111000000
Q ss_pred -cc--------cccccc-ccch-hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 396 -VD--------SNLVRR-EHSF-SAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 396 -~d--------~~l~~~-~~~~-~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
+. ..+... .... .....+...+.+++.+|++.||++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00 000000 0000 000122456899999999999999999999975
No 231
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.1e-39 Score=328.02 Aligned_cols=255 Identities=24% Similarity=0.318 Sum_probs=187.9
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecC------CeeE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNL------DFKA 245 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 245 (457)
.+|...+.||+|+||.||+|+.. +|+.||||++.... ..+.+|++++++++||||+++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 36888899999999999999985 69999999986542 2234799999999999999999988432 2467
Q ss_pred EEEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCC-CcEEEeccccc
Q 044428 246 LVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDEN-MVAHVSDFGIS 321 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~~ 321 (457)
+||||+++ +|.+.+.. ....+++..+..++.|++.||.||| ..+|+||||||+|||++.+ +.+||+|||++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 99999975 66665542 3456899999999999999999999 7889999999999999955 67899999999
Q ss_pred cccCCCCCcceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc-h---h
Q 044428 322 KLLGEGDDSLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH-K---L 392 (457)
Q Consensus 322 ~~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~-~---~ 392 (457)
+.+..... .....||+.|+|||. .++.++|||||||++|||++|+.||......+....+...+.. . +
T Consensus 205 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 205 KQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp EECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 97644322 233578999999993 3678999999999999999999999764432222111111111 0 1
Q ss_pred HHhccccccccccc------hh--HHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 393 AEVVDSNLVRREHS------FS--AKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 393 ~~~~d~~l~~~~~~------~~--~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+. ++........ .. .....+..+.+|+.+|++.||++||++.|+++
T Consensus 282 ~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred Hhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 111 1111000000 00 00112456899999999999999999999975
No 232
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.7e-39 Score=318.89 Aligned_cols=200 Identities=26% Similarity=0.319 Sum_probs=168.2
Q ss_pred HHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcC-CC-----ccceeeeeeecCC
Q 044428 170 RATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-HR-----NLIKILSGCSNLD 242 (457)
Q Consensus 170 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~ 242 (457)
...++|...+.||+|+||.||+|+.. +++.||||+++... .....+..|+.++..++ |+ +|+++.+++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 34578999999999999999999875 68899999997542 33456778888888885 44 4999999999999
Q ss_pred eeEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec--CCCcEEEeccc
Q 044428 243 FKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD--ENMVAHVSDFG 319 (457)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~--~~~~~kl~Dfg 319 (457)
..++||||++ |+|.+++.... ..+++..+..++.|++.||.|||.. ..+|+||||||+|||++ .++.+||+|||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST--TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC--CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 9999999995 69999998764 4589999999999999999999942 36799999999999994 57889999999
Q ss_pred cccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCC
Q 044428 320 ISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEM 378 (457)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~ 378 (457)
+++..... .....||+.|+|||. .++.++|||||||++|||+||+.||......
T Consensus 207 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 264 (382)
T 2vx3_A 207 SSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264 (382)
T ss_dssp TCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred Cceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99876432 234678999999993 3688999999999999999999999865433
No 233
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.3e-39 Score=314.79 Aligned_cols=248 Identities=24% Similarity=0.297 Sum_probs=176.2
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHH-HHhhcCCCccceeeeeeecCCeeEEEEe
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECE-VLRNVRHRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (457)
++|...+.||+|+||.||+|... +|+.||||++.... ......+..|+. +++.++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 67888899999999999999985 78999999997653 233345556665 6777899999999999999999999999
Q ss_pred ccCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-CeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 250 FMPNGSLEKWLYS----HNYFLDILERLNIMIDVGLALEYLHYGHALA-PIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 250 ~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
|++ |+|.+++.. ....+++..+..++.+++.||.||| .. +|+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 102 LMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK----ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH----HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred ecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh----ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 997 488887763 2356899999999999999999999 45 7999999999999999999999999999876
Q ss_pred CCCCCcceeccccccccccCCCCC--------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhc
Q 044428 325 GEGDDSLIQTKTMATIGYMAPEGI--------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVV 396 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE~~--------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~ 396 (457)
.... ......||+.|+|||.+ ++.++||||||+++|||++|+.||...... ...........
T Consensus 177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~----- 246 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV--FDQLTQVVKGD----- 246 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCCSC-----
T ss_pred cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH--HHHHHHHhcCC-----
Confidence 4322 12234689999999965 577999999999999999999999753211 11111111000
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 397 DSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 397 d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.+.+.... ...++..+.+++.+|++.||++||++.|+++
T Consensus 247 ~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 247 PPQLSNSE-----EREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCCS-----SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCcc-----cccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00111000 0112456899999999999999999999976
No 234
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.6e-39 Score=317.46 Aligned_cols=268 Identities=20% Similarity=0.245 Sum_probs=187.5
Q ss_pred HHHHHHhhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeecCCe-
Q 044428 166 LDIQRATNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDF- 243 (457)
Q Consensus 166 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 243 (457)
.......++|...+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.+..++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455677889999999999999999999975 78999999986542 223456778888999999999999999865433
Q ss_pred ------eEEEEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC-CCcE
Q 044428 244 ------KALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE-NMVA 313 (457)
Q Consensus 244 ------~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~-~~~~ 313 (457)
.++||||+++ +|.+.+.. ....+++..+..++.|++.||.|||.. ..+|+||||||+|||++. ++.+
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--~~~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP--SVNVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST--TTCCBCSCCCGGGEEEETTTTEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC--CCCeecCcCCHHHEEEeCCCCcE
Confidence 7899999976 55544432 335588999999999999999999932 467999999999999996 8999
Q ss_pred EEeccccccccCCCCCcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhc
Q 044428 314 HVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSL 388 (457)
Q Consensus 314 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~ 388 (457)
||+|||+++....... .....||+.|+|||.+ ++.++|||||||++|||++|+.||...........+....
T Consensus 172 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 248 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL 248 (360)
T ss_dssp EECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred EEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHc
Confidence 9999999987654322 2345689999999933 6889999999999999999999998754333222222211
Q ss_pred Cch---hHHhcccccccc-----c-cch-----hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 389 PHK---LAEVVDSNLVRR-----E-HSF-----SAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 389 ~~~---~~~~~d~~l~~~-----~-~~~-----~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
... ....+++..... . ... .....+...+.+++.+|++.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 111 111111100000 0 000 000013557899999999999999999999975
No 235
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.6e-39 Score=315.61 Aligned_cols=258 Identities=22% Similarity=0.273 Sum_probs=195.7
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CC-CEEEEEEecccchhhHHHHHHHHHHHhhcCCCc------cceeeeeeecCCe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DG-TNVAIKIFNLQLERTFVSFNSECEVLRNVRHRN------LIKILSGCSNLDF 243 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 243 (457)
.++|...+.||+|+||.||+|... ++ +.||+|+++... .....+.+|++++++++|++ ++.+.+++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 368889999999999999999874 34 789999997542 34467888999999997766 8999999999999
Q ss_pred eEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee---------------
Q 044428 244 KALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL--------------- 307 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll--------------- 307 (457)
.++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH----ENQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEecccccccccccccc
Confidence 99999999 677777776554 56899999999999999999999 7789999999999999
Q ss_pred ----cCCCcEEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCc
Q 044428 308 ----DENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMS 379 (457)
Q Consensus 308 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~ 379 (457)
+.++.+||+|||+++..... .....||+.|+|||. .++.++|||||||++|||++|+.||.......
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred cccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 67889999999999875332 233578999999994 36889999999999999999999998654333
Q ss_pred HHHHHHhhcCchhHHhcc----c------ccccc----------------ccchhHHHHHHHHHHHHHHhccCCCCCCCC
Q 044428 380 LKHWVNQSLPHKLAEVVD----S------NLVRR----------------EHSFSAKMDCLLRIMNLALDCCMESPDERI 433 (457)
Q Consensus 380 l~~~~~~~~~~~~~~~~d----~------~l~~~----------------~~~~~~~~~~~~~l~~l~~~C~~~~P~~RP 433 (457)
....+.........+... . ..... .........+...+.+++.+|++.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 322222221111000000 0 00000 000000112355789999999999999999
Q ss_pred CHHHHHH
Q 044428 434 HTTNAAA 440 (457)
Q Consensus 434 s~~ev~~ 440 (457)
|+.|+++
T Consensus 327 t~~e~l~ 333 (355)
T 2eu9_A 327 TLAEALL 333 (355)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999974
No 236
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=323.45 Aligned_cols=196 Identities=22% Similarity=0.292 Sum_probs=150.4
Q ss_pred hcCCc-CCccCCCCceEEEEEEeC---CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeee--cCCeeEE
Q 044428 173 NEFDE-CNLLGIGSFGSVYKGTLS---DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCS--NLDFKAL 246 (457)
Q Consensus 173 ~~~~~-~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 246 (457)
+.|.. .++||+|+||.||+|+.. +++.||||++.... ....+.+|+.++++++||||+++++++. .....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 44555 458999999999999975 57899999997543 2346789999999999999999999994 4678999
Q ss_pred EEeccCCCCHHHHHhhCC--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeee----cCCCcEE
Q 044428 247 VLEFMPNGSLEKWLYSHN--------YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILL----DENMVAH 314 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~--------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll----~~~~~~k 314 (457)
||||++ |+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+|||+ +.++.+|
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence 999996 68888776321 24899999999999999999999 6779999999999999 7789999
Q ss_pred EeccccccccCCCCCc-ceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCC
Q 044428 315 VSDFGISKLLGEGDDS-LIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDL 375 (457)
Q Consensus 315 l~Dfg~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~ 375 (457)
|+|||+++........ .......||+.|+|||.+ ++.++|||||||++|||++|+.||...
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 9999999876432211 122346789999999933 677899999999999999999999753
No 237
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=317.81 Aligned_cols=255 Identities=21% Similarity=0.269 Sum_probs=190.6
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCe------
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDF------ 243 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 243 (457)
++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57888899999999999999875 78999999997543 2335678899999999999999999999877654
Q ss_pred eEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 244 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
.++||||++ |+|.+++.. .+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 688887753 3899999999999999999999 67899999999999999999999999999986
Q ss_pred cCCCCCcceeccccccccccCCCC-----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCc---hhHHh
Q 044428 324 LGEGDDSLIQTKTMATIGYMAPEG-----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPH---KLAEV 395 (457)
Q Consensus 324 ~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~---~~~~~ 395 (457)
.... .....+|+.|+|||. .++.++||||||+++|||++|+.||......+....+...... ...+.
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 5322 233568999999993 3678999999999999999999999764432222221111110 00000
Q ss_pred cc--------cccccc-ccch-hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 396 VD--------SNLVRR-EHSF-SAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 396 ~d--------~~l~~~-~~~~-~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
+. ..+... .... .....++..+.+++.+|++.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 000000 0000 000122456899999999999999999999975
No 238
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=314.52 Aligned_cols=248 Identities=23% Similarity=0.261 Sum_probs=178.2
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccch--hhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE--RTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
.++|+..+.||+|+||.||+|+.. +|+.||||++..... .....+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888899999999999999985 789999999975432 22233445556788889999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+ ++.+..+.......+++..+..++.+++.||.|||+. .+++||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK---HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH---HCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh---CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 5666666665455689999999999999999999931 279999999999999999999999999998654322
Q ss_pred CcceeccccccccccCCCCC---------CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccc
Q 044428 329 DSLIQTKTMATIGYMAPEGI---------VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSN 399 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~---------~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 399 (457)
......||+.|+|||.+ ++.++||||||+++|||++|+.||..... ......... ....+.
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~-----~~~~~~ 249 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT--DFEVLTKVL-----QEEPPL 249 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHHHHHHH-----HSCCCC
T ss_pred ---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc--cHHHHHHHh-----ccCCCC
Confidence 12335689999999954 46789999999999999999999975321 111111110 000000
Q ss_pred ccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 400 LVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 400 l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
+... ..++..+.+++.+|++.||.+||++.|+++
T Consensus 250 ~~~~-------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 250 LPGH-------MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCSS-------SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCcc-------CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1000 012446889999999999999999999986
No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.8e-39 Score=314.58 Aligned_cols=247 Identities=21% Similarity=0.279 Sum_probs=168.9
Q ss_pred hhcCCcCC-ccCCCCceEEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCccceeeeeeec----CCeeE
Q 044428 172 TNEFDECN-LLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNLIKILSGCSN----LDFKA 245 (457)
Q Consensus 172 ~~~~~~~~-~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 245 (457)
.++|...+ .||+|+||.||+|+.. +|+.||||++.... ....+....+..++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 46788754 6999999999999986 79999999986532 112223344566799999999999876 45689
Q ss_pred EEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC---CCcEEEeccccc
Q 044428 246 LVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE---NMVAHVSDFGIS 321 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfg~~ 321 (457)
+||||+++|+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+||+++. ++.+||+|||++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH----~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 9999999999999998764 46899999999999999999999 678999999999999976 456999999999
Q ss_pred cccCCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcc
Q 044428 322 KLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVD 397 (457)
Q Consensus 322 ~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d 397 (457)
+..... ......||+.|+|||.+ ++.++||||||+++|||++|+.||................... ..
T Consensus 179 ~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~-- 250 (336)
T 3fhr_A 179 KETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG--QY-- 250 (336)
T ss_dssp EEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred eecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc--cc--
Confidence 865432 12345689999999965 4568999999999999999999997643322111111000000 00
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 398 SNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 398 ~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
... ......++..+.+++.+|++.||++|||+.|+++
T Consensus 251 -~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 251 -GFP-----NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -CCC-----TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -ccC-----chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000 0001122456889999999999999999999986
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3e-39 Score=326.17 Aligned_cols=245 Identities=23% Similarity=0.296 Sum_probs=180.6
Q ss_pred CCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEEEEeccCC
Q 044428 175 FDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKALVLEFMPN 253 (457)
Q Consensus 175 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (457)
|...+.||+|+||+||.+...+|+.||||++.... ...+.+|+.++.++ +||||+++++++.+.+..++||||++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 34457899999999987766789999999987542 34578899999887 89999999999999999999999995
Q ss_pred CCHHHHHhhCCCC------CCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCC-------------CcEE
Q 044428 254 GSLEKWLYSHNYF------LDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDEN-------------MVAH 314 (457)
Q Consensus 254 g~L~~~l~~~~~~------l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~-------------~~~k 314 (457)
|+|.+++...... .++..++.++.||+.||+||| ..+|+||||||+|||++.+ +.+|
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 7999999875421 123345789999999999999 6789999999999999754 4899
Q ss_pred EeccccccccCCCCCcc--eeccccccccccCCCCC-----------CCCccchhhhhHHHHHHhc-CCCCCCCCCCCcH
Q 044428 315 VSDFGISKLLGEGDDSL--IQTKTMATIGYMAPEGI-----------VSTKCDVYSYGILLLETFS-RKKPTNDLGEMSL 380 (457)
Q Consensus 315 l~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~-----------~~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l 380 (457)
|+|||+++......... ......||+.|+|||.+ ++.++|||||||++|||+| |+.||.......
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~- 247 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE- 247 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-
Confidence 99999999875433221 12345799999999933 5778999999999999999 999996532211
Q ss_pred HHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 381 KHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 381 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
.......... +.+ .......++..+.+++.+|++.||++|||+.||++
T Consensus 248 ~~i~~~~~~~-------~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SNIIRGIFSL-------DEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHTCCCC-------CCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCCc-------ccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111111000 000 00011234567899999999999999999999985
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.1e-39 Score=313.03 Aligned_cols=237 Identities=25% Similarity=0.278 Sum_probs=193.3
Q ss_pred HhhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchh------hHHHHHHHHHHHhhcC--CCccceeeeeeecC
Q 044428 171 ATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLER------TFVSFNSECEVLRNVR--HRNLIKILSGCSNL 241 (457)
Q Consensus 171 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~ 241 (457)
..++|...+.||+|+||.||+|+. .+++.||||++...... ....+.+|+.++.+++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 446788999999999999999986 47899999999754321 2245678999999996 59999999999999
Q ss_pred CeeEEEEeccCC-CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec-CCCcEEEeccc
Q 044428 242 DFKALVLEFMPN-GSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD-ENMVAHVSDFG 319 (457)
Q Consensus 242 ~~~~lv~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg 319 (457)
+..++|+||+.+ ++|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++ +++.+||+|||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH----NCGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH----HCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 999999999976 89999998754 4899999999999999999999 67899999999999999 78999999999
Q ss_pred cccccCCCCCcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHH
Q 044428 320 ISKLLGEGDDSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394 (457)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~ 394 (457)
+++...... .....||+.|+|||.+ .+.++||||||+++|||++|+.||.... ....
T Consensus 196 ~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~--------- 257 (320)
T 3a99_A 196 SGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIR--------- 257 (320)
T ss_dssp TCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHHH---------
T ss_pred ccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----hhhc---------
Confidence 998764322 2345689999999933 3678899999999999999999996421 1111
Q ss_pred hccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 395 VVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 395 ~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
...... . .++..+.+++.+||+.||++|||+.|+++
T Consensus 258 ---~~~~~~-~------~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 258 ---GQVFFR-Q------RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ---CCCCCS-S------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---cccccc-c------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 0 11345889999999999999999999976
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=310.97 Aligned_cols=241 Identities=26% Similarity=0.302 Sum_probs=186.1
Q ss_pred HHHHHhhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccch------hhHHHHHHHHHHHhhc----CCCccceee
Q 044428 167 DIQRATNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLE------RTFVSFNSECEVLRNV----RHRNLIKIL 235 (457)
Q Consensus 167 ~l~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~ 235 (457)
+.....++|...+.||+|+||.||+|+. .+++.||||++..... .....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3445567899999999999999999986 4789999999975432 1233466799999998 899999999
Q ss_pred eeeecCCeeEEEEec-cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeec-CCCcE
Q 044428 236 SGCSNLDFKALVLEF-MPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLD-ENMVA 313 (457)
Q Consensus 236 ~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~-~~~~~ 313 (457)
+++...+..++|+|| +++++|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+||+++ .++.+
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH----SRGVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH----HHTEECCCCSGGGEEEETTTTEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChhhEEEeCCCCeE
Confidence 999999999999999 78999999998754 4899999999999999999999 56799999999999999 89999
Q ss_pred EEeccccccccCCCCCcceeccccccccccCCCCC-----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhc
Q 044428 314 HVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI-----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSL 388 (457)
Q Consensus 314 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~ 388 (457)
||+|||+++...... .....|+..|+|||.+ .+.++||||||+++|||++|+.||.... ...
T Consensus 180 kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~---- 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----EIL---- 246 (312)
T ss_dssp EECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHH----
T ss_pred EEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----HHh----
Confidence 999999998764322 2345689999999933 3458999999999999999999996421 111
Q ss_pred CchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 389 PHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 389 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
...... . ..+...+.+++.+|++.+|++||++.|+++
T Consensus 247 --------~~~~~~-~------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 --------EAELHF-P------AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp --------HTCCCC-C------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --------hhccCC-c------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111100 0 012345789999999999999999999986
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=323.86 Aligned_cols=245 Identities=22% Similarity=0.310 Sum_probs=183.5
Q ss_pred hcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEEEEecc
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKALVLEFM 251 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 251 (457)
.+|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 46788889999999997655556899999999865322 2356899999999 7999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC-----CCcEEEeccccccccCC
Q 044428 252 PNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE-----NMVAHVSDFGISKLLGE 326 (457)
Q Consensus 252 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~-----~~~~kl~Dfg~~~~~~~ 326 (457)
+ |+|.+++........+.....++.||+.||.||| ..+|+||||||+|||++. ...+||+|||+++....
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH----SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH----HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH----HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 5 6999999877655555667889999999999999 678999999999999943 34688999999987754
Q ss_pred CCCc-ceeccccccccccCCCCCC-------CCccchhhhhHHHHHHhc-CCCCCCCCCCCcHHHHHHhhcCchhHHhcc
Q 044428 327 GDDS-LIQTKTMATIGYMAPEGIV-------STKCDVYSYGILLLETFS-RKKPTNDLGEMSLKHWVNQSLPHKLAEVVD 397 (457)
Q Consensus 327 ~~~~-~~~~~~~gt~~y~aPE~~~-------~~~~Dv~s~Gvvl~el~t-g~~p~~~~~~~~l~~~~~~~~~~~~~~~~d 397 (457)
.... .......||+.|+|||.+. +.++|||||||++|||+| |..||......... .. ......+...
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-~~---~~~~~~~~~~ 251 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-IL---LGACSLDCLH 251 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-HH---TTCCCCTTSC
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-HH---hccCCccccC
Confidence 3222 1233467999999999653 458999999999999999 99998643221111 10 0000000000
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 398 SNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 398 ~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
. .......+.+++.+|++.||++|||+.||++
T Consensus 252 -----~------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 252 -----P------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -----T------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----c------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0 0122445789999999999999999999983
No 244
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=9.8e-39 Score=315.79 Aligned_cols=257 Identities=21% Similarity=0.276 Sum_probs=190.7
Q ss_pred hcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHHhhcC-----------CCccceeeeeeec
Q 044428 173 NEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-----------HRNLIKILSGCSN 240 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~ 240 (457)
++|...+.||+|+||.||+|+. .+++.||||++.... .....+.+|+.++.+++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5788899999999999999987 478999999997542 23456788999998886 8999999999876
Q ss_pred CC----eeEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCC-CeeeccCCCCCeeec------
Q 044428 241 LD----FKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALA-PIIHCDLKPSNILLD------ 308 (457)
Q Consensus 241 ~~----~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-~ivH~dlk~~NIll~------ 308 (457)
.+ ..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| .. +|+||||||+|||++
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH----~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH----RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH----HTTCEECSCCSGGGEEEEEEETTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH----hcCCEEecCCChHHeEEeccCCCc
Confidence 54 789999999 899999998743 45899999999999999999999 55 799999999999994
Q ss_pred CCCcEEEeccccccccCCCCCcceeccccccccccCCCC----CCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHH---
Q 044428 309 ENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEG----IVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLK--- 381 (457)
Q Consensus 309 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~----~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~--- 381 (457)
.++.+||+|||+++..... .....||+.|+|||. .++.++|||||||++|||+||+.||.........
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4458999999999876432 233578999999993 3788999999999999999999999764322110
Q ss_pred HHH---Hhhc---Cchh-------HHhcccc-cccc-----c--------cchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044428 382 HWV---NQSL---PHKL-------AEVVDSN-LVRR-----E--------HSFSAKMDCLLRIMNLALDCCMESPDERIH 434 (457)
Q Consensus 382 ~~~---~~~~---~~~~-------~~~~d~~-l~~~-----~--------~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs 434 (457)
..+ .... +... ...+... .... . .....+..+...+.+++.+|++.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 000 0000 0000 0000000 0000 0 000012345678999999999999999999
Q ss_pred HHHHHH
Q 044428 435 TTNAAA 440 (457)
Q Consensus 435 ~~ev~~ 440 (457)
+.|+++
T Consensus 328 ~~ell~ 333 (373)
T 1q8y_A 328 AGGLVN 333 (373)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999975
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.2e-38 Score=303.96 Aligned_cols=232 Identities=13% Similarity=0.061 Sum_probs=183.9
Q ss_pred hcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEEE
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALVL 248 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (457)
++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+..+.+++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57888899999999999999985 58999999997653 233467899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCC
Q 044428 249 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 328 (457)
Q Consensus 249 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 328 (457)
||+++++|.+++... ....+..+++.|++.||+||| ..+|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH----~~givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH----RAGVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH----HCCCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999999653 355678899999999999999 6789999999999999999999998554
Q ss_pred CcceeccccccccccCCCCCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccc-h
Q 044428 329 DSLIQTKTMATIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHS-F 407 (457)
Q Consensus 329 ~~~~~~~~~gt~~y~aPE~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~-~ 407 (457)
|++| ++.++|||||||++|||+||+.||............. ..+...... .
T Consensus 175 -------------~~~~---~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~------------~~~~~~~~~~~ 226 (286)
T 3uqc_A 175 -------------TMPD---ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE------------RDTAGQPIEPA 226 (286)
T ss_dssp -------------CCTT---CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC------------BCTTSCBCCHH
T ss_pred -------------ccCC---CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH------------HHhccCCCChh
Confidence 2333 5779999999999999999999998643221000000 000000000 0
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 044428 408 SAKMDCLLRIMNLALDCCMESPDERIHTTNAAAKLRKIKVQF 449 (457)
Q Consensus 408 ~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~~L~~i~~~~ 449 (457)
....+++..+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 227 ~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 227 DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0011235568999999999999999 9999999999986543
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.4e-38 Score=329.89 Aligned_cols=258 Identities=24% Similarity=0.309 Sum_probs=191.6
Q ss_pred hhcCCcCCccCCCCceEEEEEEeC-CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeec------CCe
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSN------LDF 243 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 243 (457)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999874 68999999987643 3445678999999999999999999998765 677
Q ss_pred eEEEEeccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCc---EEEecc
Q 044428 244 KALVLEFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMV---AHVSDF 318 (457)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~---~kl~Df 318 (457)
.++||||+++|+|.+++.... ..+++..+..++.+++.||.||| ..+|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH----s~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH----ENRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH----HTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 899999999999999998754 35888899999999999999999 678999999999999996664 999999
Q ss_pred ccccccCCCCCcceeccccccccccCCCCC----CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHH
Q 044428 319 GISKLLGEGDDSLIQTKTMATIGYMAPEGI----VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAE 394 (457)
Q Consensus 319 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~ 394 (457)
|+++....... .....||+.|+|||.+ ++.++||||||+++|||++|+.||.... ....|...........
T Consensus 169 G~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~--~~~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 169 GYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW--QPVQWHGKVREKSNEH 243 (676)
T ss_dssp CCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC--HHHHSSTTCC------
T ss_pred ccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc--chhhhhhhhhcccchh
Confidence 99987654322 2346799999999954 6789999999999999999999996532 2222222111111111
Q ss_pred -hcccccccc-------ccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 044428 395 -VVDSNLVRR-------EHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNA 438 (457)
Q Consensus 395 -~~d~~l~~~-------~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev 438 (457)
.......+. ..........+..+.+++.+|++.||++|||+.|+
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 001000000 00000111235678999999999999999999883
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.1e-38 Score=333.92 Aligned_cols=238 Identities=21% Similarity=0.245 Sum_probs=191.2
Q ss_pred hcCCcCCccCCCCceEEEEEEeC--CCCEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCe-----e
Q 044428 173 NEFDECNLLGIGSFGSVYKGTLS--DGTNVAIKIFNLQL-ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDF-----K 244 (457)
Q Consensus 173 ~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~ 244 (457)
++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 68999999999999999999975 68999999986543 3345578999999999999999999999987655 6
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 245 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
++||||+++++|.+++.. .+++.+++.++.||+.||.||| ..+|+||||||+|||++.+ .+||+|||+++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH----~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH----SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH----HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 999999999999998765 4899999999999999999999 6789999999999999986 8999999999876
Q ss_pred CCCCCcceeccccccccccCCCCC---CCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 325 GEGDDSLIQTKTMATIGYMAPEGI---VSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 325 ~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
... ....||++|+|||.+ .+.++|||||||++|||++|..|+...... .+ .
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------~~--------~ 285 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD------------GL--------P 285 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS------------SC--------C
T ss_pred ccC------CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc------------cc--------c
Confidence 432 335699999999933 578999999999999999999887642100 00 0
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHHHHhHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIH-TTNAAAKLRKIKVQ 448 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs-~~ev~~~L~~i~~~ 448 (457)
. ..........+.+++.+|++.||++||+ +.++...|..+..+
T Consensus 286 ~----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 286 E----DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp T----TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred c----cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 0 0011122456889999999999999994 66677777766544
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.3e-37 Score=298.56 Aligned_cols=229 Identities=20% Similarity=0.310 Sum_probs=177.4
Q ss_pred hcCCcC-CccCCCCceEEEEEEe-CCCCEEEEEEecccchhhHHHHHHHHHHH-hhcCCCccceeeeeeec----CCeeE
Q 044428 173 NEFDEC-NLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLERTFVSFNSECEVL-RNVRHRNLIKILSGCSN----LDFKA 245 (457)
Q Consensus 173 ~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~ 245 (457)
++|... +.||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 566666 6799999999999987 47899999998642 3467888888 55689999999999876 67889
Q ss_pred EEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC---CCcEEEeccccc
Q 044428 246 LVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE---NMVAHVSDFGIS 321 (457)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfg~~ 321 (457)
+||||+++|+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+||+++. ++.+||+|||++
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 9999999999999998764 46899999999999999999999 678999999999999998 789999999998
Q ss_pred cccCCCCCcceeccccccccccCCCCCCCCccchhhhhHHHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhcccccc
Q 044428 322 KLLGEGDDSLIQTKTMATIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLV 401 (457)
Q Consensus 322 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~Dv~s~Gvvl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 401 (457)
..... ..++.++|||||||++|||+||+.||......... ...... +....
T Consensus 168 ~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~----~~~~~~---~~~~~-- 218 (299)
T 3m2w_A 168 KETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKTR---IRMGQ-- 218 (299)
T ss_dssp EECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------CCSCCS---SCTTC--
T ss_pred ccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh----HHHHHH---Hhhcc--
Confidence 76432 12466899999999999999999999754321110 000000 00000
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 402 RREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 402 ~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
..........++..+.+++.+|++.||++|||+.|+++
T Consensus 219 -~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 219 -YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp -CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00001111233567899999999999999999999986
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-38 Score=318.62 Aligned_cols=245 Identities=15% Similarity=0.180 Sum_probs=179.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEe-CCCCEEEEEEecccch---hhHHHHHHHHHHHhhcCC-Cccceeeee---------
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTL-SDGTNVAIKIFNLQLE---RTFVSFNSECEVLRNVRH-RNLIKILSG--------- 237 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l~~~--------- 237 (457)
+..|...+.||+|+||.||+|++ .+|+.||||++..... ...+.+.+|+.++..++| +|......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34566778999999999999995 4799999999874332 235678999999999987 322211111
Q ss_pred ------------eec-----CCeeEEEEeccCCCCHHHHHh------hCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 044428 238 ------------CSN-----LDFKALVLEFMPNGSLEKWLY------SHNYFLDILERLNIMIDVGLALEYLHYGHALAP 294 (457)
Q Consensus 238 ------------~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ 294 (457)
+.. ....+++|+++ +++|.+++. .....+++..++.++.|++.||+||| ..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ 231 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH----HYG 231 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH----HTT
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH----hCC
Confidence 111 12356677765 789999884 22345788899999999999999999 678
Q ss_pred eeeccCCCCCeeecCCCcEEEeccccccccCCCCCcceeccccccccccCCCCC--------------CCCccchhhhhH
Q 044428 295 IIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGI--------------VSTKCDVYSYGI 360 (457)
Q Consensus 295 ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~--------------~~~~~Dv~s~Gv 360 (457)
|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||.+ ++.++|||||||
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGv 305 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL 305 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHH
Confidence 999999999999999999999999998865321 334567 999999965 456999999999
Q ss_pred HHHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 044428 361 LLLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNLALDCCMESPDERIHTTNAAA 440 (457)
Q Consensus 361 vl~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l~~~C~~~~P~~RPs~~ev~~ 440 (457)
++|||+||+.||....... ..+..+.... .++..+.+++.+||+.||++||++.|+++
T Consensus 306 il~elltg~~Pf~~~~~~~---------------~~~~~~~~~~-------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 306 AIYWIWCADLPNTDDAALG---------------GSEWIFRSCK-------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHHHSSCCCCTTGGGS---------------CSGGGGSSCC-------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHCCCCCCCcchhh---------------hHHHHHhhcc-------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999999997532111 1111111111 11356899999999999999999988865
Q ss_pred H--HHHhHHHH
Q 044428 441 K--LRKIKVQF 449 (457)
Q Consensus 441 ~--L~~i~~~~ 449 (457)
. ++++++..
T Consensus 364 ~~~~~~~~~~~ 374 (413)
T 3dzo_A 364 TPEYEQLRTEL 374 (413)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 3 44444433
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.8e-36 Score=293.24 Aligned_cols=240 Identities=19% Similarity=0.225 Sum_probs=178.9
Q ss_pred hhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccc--------hhhHHHHHHHHHHHhhcC---------C------
Q 044428 172 TNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--------ERTFVSFNSECEVLRNVR---------H------ 228 (457)
Q Consensus 172 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~---------h------ 228 (457)
.++|...+.||+|+||.||+|+. +|+.||||++.... ......+.+|+.+++.++ |
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788899999999999999998 68999999997642 223467889999998886 5
Q ss_pred -----------Cccceeeeeeec-------------CCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHH
Q 044428 229 -----------RNLIKILSGCSN-------------LDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE 284 (457)
Q Consensus 229 -----------~niv~l~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~ 284 (457)
|||+++++++.. .+..++||||+++|++.+.+.. ..+++..+..++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 555555554443 6789999999999977776654 34899999999999999999
Q ss_pred HHHhcCCCCCeeeccCCCCCeeecCCC--------------------cEEEeccccccccCCCCCcceeccccccccccC
Q 044428 285 YLHYGHALAPIIHCDLKPSNILLDENM--------------------VAHVSDFGISKLLGEGDDSLIQTKTMATIGYMA 344 (457)
Q Consensus 285 ~LH~~~~~~~ivH~dlk~~NIll~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a 344 (457)
|||+ ..+|+||||||+|||++.++ .+||+|||+++..... ...||+.|+|
T Consensus 176 ~lH~---~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~a 245 (336)
T 2vuw_A 176 VAEA---SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMD 245 (336)
T ss_dssp HHHH---HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTC
T ss_pred HHHH---hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccC
Confidence 9992 24599999999999999887 9999999999976432 2469999999
Q ss_pred CCCC---CCCccchhhhhHH-HHHHhcCCCCCCCCCCCcHHHHHHhhcCchhHHhccccccccccchhHHHHHHHHHHHH
Q 044428 345 PEGI---VSTKCDVYSYGIL-LLETFSRKKPTNDLGEMSLKHWVNQSLPHKLAEVVDSNLVRREHSFSAKMDCLLRIMNL 420 (457)
Q Consensus 345 PE~~---~~~~~Dv~s~Gvv-l~el~tg~~p~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~l~~l 420 (457)
||.+ .+.++||||+|++ .+++++|..||.. ..|..... ..+.................+...+.++
T Consensus 246 PE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~~dl 315 (336)
T 2vuw_A 246 EDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSN------VLWLHYLT----DKMLKQMTFKTKCNTPAMKQIKRKIQEF 315 (336)
T ss_dssp SGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHH------HHHHHHHH----HHHHHTCCCSSCCCSHHHHHHHHHHHHH
T ss_pred hhhhcCCCccceehhhhhCCCCcccccccCCCcc------hhhhhHHH----HhhhhhhccCcccchhhhhhcCHHHHHH
Confidence 9954 4668999998777 7789999998732 12211110 0111110111111122334567789999
Q ss_pred HHhccCCCCCCCCCHHHHH
Q 044428 421 ALDCCMESPDERIHTTNAA 439 (457)
Q Consensus 421 ~~~C~~~~P~~RPs~~ev~ 439 (457)
+.+|++.| |+.|++
T Consensus 316 i~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 316 HRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHGGGSS-----SHHHHH
T ss_pred HHHHhccC-----CHHHHH
Confidence 99999966 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2.6e-30 Score=268.29 Aligned_cols=182 Identities=18% Similarity=0.093 Sum_probs=129.8
Q ss_pred ccCCCCceEEEEEE-eCCCCEEEEEEecccc----------hhhHHHHHHHHHHHhhc-CCCccceeeeeeecCCeeEEE
Q 044428 180 LLGIGSFGSVYKGT-LSDGTNVAIKIFNLQL----------ERTFVSFNSECEVLRNV-RHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 180 ~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 247 (457)
..+.|++|.+..++ .--|+.+|+|++.... +...++|.+|+++|+++ .|+||+++++++.+.+..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 34556666655543 2358889999996531 23346799999999999 799999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||++|++|.+++...+ .++.. +|+.||+.||+|+| ..+||||||||+|||+++++.+||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH----~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE----KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH----HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH----HCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999998765 35543 58999999999999 788999999999999999999999999999876432
Q ss_pred CCcceeccccccccccCCCCC---CCCccchhhhhHHHHHHhcCCCC
Q 044428 328 DDSLIQTKTMATIGYMAPEGI---VSTKCDVYSYGILLLETFSRKKP 371 (457)
Q Consensus 328 ~~~~~~~~~~gt~~y~aPE~~---~~~~~Dv~s~Gvvl~el~tg~~p 371 (457)
.. ......||++|+|||.+ ...++|+||+|++++++.++..|
T Consensus 393 ~~--~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CS--WPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -C--CSHHHHHHHHHHHHHHC-----------------CCCCTTHHH
T ss_pred Cc--cccCceechhhccHHHhCCCCCCcccccccccchhhhccccch
Confidence 21 23346799999999955 55689999999999888776544
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=1.9e-27 Score=245.47 Aligned_cols=182 Identities=19% Similarity=0.189 Sum_probs=142.6
Q ss_pred CcCCccCCCCceEEEEEEeCCCCEEEEEEecccc--------hhhHHHHHHHHHHHhhcCCCccceeeeeeecCCeeEEE
Q 044428 176 DECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQL--------ERTFVSFNSECEVLRNVRHRNLIKILSGCSNLDFKALV 247 (457)
Q Consensus 176 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (457)
...+.||+|+||.||+|+. .++.+++|+..... ....+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4456899999999999954 57889999864321 11234589999999999999999777777777888999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCC
Q 044428 248 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEG 327 (457)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 327 (457)
|||+++++|.+++.. +..++.|++.||.||| ..+|+||||||+|||++. .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH----~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH----KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH----HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH----HCcCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999976 4579999999999999 678999999999999998 9999999999987542
Q ss_pred CCcc-----eeccccccccccCCCCC------CCCccchhhhhHHHHHHhcCCCCCC
Q 044428 328 DDSL-----IQTKTMATIGYMAPEGI------VSTKCDVYSYGILLLETFSRKKPTN 373 (457)
Q Consensus 328 ~~~~-----~~~~~~gt~~y~aPE~~------~~~~~Dv~s~Gvvl~el~tg~~p~~ 373 (457)
.... ......||+.|+|||.+ ++..+|+||..+-.++-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2111 11346799999999954 5667899999999999888887764
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.2e-23 Score=199.49 Aligned_cols=140 Identities=15% Similarity=0.146 Sum_probs=113.1
Q ss_pred HHHHhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccch------------------hhHHHHHHHHHHHhhcCCC
Q 044428 168 IQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLE------------------RTFVSFNSECEVLRNVRHR 229 (457)
Q Consensus 168 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l~h~ 229 (457)
+......|...+.||+|+||.||+|...+|+.||||+++.... .....+.+|++++++++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence 3444445666689999999999999998899999999964321 13456899999999999
Q ss_pred ccceeeeeeecCCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecC
Q 044428 230 NLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDE 309 (457)
Q Consensus 230 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~ 309 (457)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.||| ..+|+||||||+|||++
T Consensus 163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH----~~giiHrDlkp~NILl~- 227 (282)
T 1zar_A 163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY----HRGIVHGDLSQYNVLVS- 227 (282)
T ss_dssp T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEEE-
T ss_pred C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH----HCCCEeCCCCHHHEEEE-
Confidence 5 666665543 55699999999999998 422 123469999999999999 67899999999999999
Q ss_pred CCcEEEecccccccc
Q 044428 310 NMVAHVSDFGISKLL 324 (457)
Q Consensus 310 ~~~~kl~Dfg~~~~~ 324 (457)
++.+||+|||+++..
T Consensus 228 ~~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 228 EEGIWIIDFPQSVEV 242 (282)
T ss_dssp TTEEEECCCTTCEET
T ss_pred CCcEEEEECCCCeEC
Confidence 999999999998753
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=8.7e-20 Score=170.64 Aligned_cols=137 Identities=21% Similarity=0.260 Sum_probs=105.6
Q ss_pred CCcCCccCCCCceEEEEEEe-CCCCE--EEEEEecccch------------------------hhHHHHHHHHHHHhhcC
Q 044428 175 FDECNLLGIGSFGSVYKGTL-SDGTN--VAIKIFNLQLE------------------------RTFVSFNSECEVLRNVR 227 (457)
Q Consensus 175 ~~~~~~lg~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~------------------------~~~~~~~~E~~~l~~l~ 227 (457)
|...+.||+|+||.||+|.. .+|+. ||||+++.... .....+.+|+..+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45667999999999999998 68889 99998754311 01236789999999998
Q ss_pred CCcc--ceeeeeeecCCeeEEEEeccCC-C----CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccC
Q 044428 228 HRNL--IKILSGCSNLDFKALVLEFMPN-G----SLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDL 300 (457)
Q Consensus 228 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dl 300 (457)
|+++ ..++++ +..++||||+.+ | +|.++... .++.....++.|++.||.|||. ..+|+||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~---~~givHrDl 197 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ---EAELVHADL 197 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH---TSCEECSSC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH---HCCEEeCCC
Confidence 8864 333332 356899999942 4 77776543 2234567899999999999994 246999999
Q ss_pred CCCCeeecCCCcEEEecccccccc
Q 044428 301 KPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 301 k~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
||+|||+++ .++|+|||++...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999999865
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.70 E-value=1e-17 Score=163.30 Aligned_cols=147 Identities=13% Similarity=0.121 Sum_probs=100.1
Q ss_pred HHHHHhhc---CCcCCccCCCCceEEEEEEeCCCCEEEEEEecccch--------------hhHHHHHHHHHHHhhcCCC
Q 044428 167 DIQRATNE---FDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLE--------------RTFVSFNSECEVLRNVRHR 229 (457)
Q Consensus 167 ~l~~~~~~---~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------------~~~~~~~~E~~~l~~l~h~ 229 (457)
.+....++ |+..+.||+|++|.||+|...+|+.||||+++.... ........+.++.+...|+
T Consensus 86 AL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~ 165 (397)
T 4gyi_A 86 ALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA 165 (397)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 44444444 888899999999999999999999999998753210 0111222222222223344
Q ss_pred ccceeeeeee------cCCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCC
Q 044428 230 NLIKILSGCS------NLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPS 303 (457)
Q Consensus 230 niv~l~~~~~------~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~ 303 (457)
|+.++..... .....++||||+++++|.++.... ....++.|++.+|.||| ..+||||||||.
T Consensus 166 nL~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~~-------~~~~l~~qll~~l~~lH----~~gIVHrDLKp~ 234 (397)
T 4gyi_A 166 FMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSVP-------DPASLYADLIALILRLA----KHGLIHGDFNEF 234 (397)
T ss_dssp HHHHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCCS-------CHHHHHHHHHHHHHHHH----HTTEECSCCSTT
T ss_pred HHHHHHhcCCCCCeeeeccCceEEEEecCCccHhhhcccH-------HHHHHHHHHHHHHHHHH----HCCCcCCCCCHH
Confidence 4433322111 112237999999998887654321 23467899999999999 678999999999
Q ss_pred CeeecCCC----------cEEEecccccccc
Q 044428 304 NILLDENM----------VAHVSDFGISKLL 324 (457)
Q Consensus 304 NIll~~~~----------~~kl~Dfg~~~~~ 324 (457)
|||+++++ .+.|+||+-+...
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 99998776 4899999977653
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.60 E-value=5e-16 Score=167.38 Aligned_cols=102 Identities=41% Similarity=0.698 Sum_probs=93.8
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
+|++|++|+.|+|++|+|+|.||.+|++|++|+.|||++|+|+|.||..+.++++|+.|||++|+|+|.+|..++|.++.
T Consensus 651 ~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~ 730 (768)
T 3rgz_A 651 EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFP 730 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSC
T ss_pred HHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCC
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCcCCCCCcccc
Q 044428 82 TESFSWNYALCGPSRFQVPPCKEEN 106 (457)
Q Consensus 82 ~~~~~~n~~lcg~~~~~~~~c~~~~ 106 (457)
..++.+|+++||++. ++|....
T Consensus 731 ~~~~~gN~~Lcg~~l---~~C~~~~ 752 (768)
T 3rgz_A 731 PAKFLNNPGLCGYPL---PRCDPSN 752 (768)
T ss_dssp GGGGCSCTEEESTTS---CCCCSCC
T ss_pred HHHhcCCchhcCCCC---cCCCCCc
Confidence 999999999999863 3786543
No 257
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.38 E-value=1.9e-12 Score=120.77 Aligned_cols=149 Identities=15% Similarity=0.080 Sum_probs=115.9
Q ss_pred HHHHhhcCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcC-CCccceeeeeeecCCeeEE
Q 044428 168 IQRATNEFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-HRNLIKILSGCSNLDFKAL 246 (457)
Q Consensus 168 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 246 (457)
+......|.....++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+..++
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3445567877778888899999999864 6889999987543233346889999999984 6778889999988889999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 044428 247 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH------------------------------------ 290 (457)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 290 (457)
||||++|.+|.+.+.. ......++.+++.++..||.-.
T Consensus 88 v~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 9999999999876421 1223468889999999999610
Q ss_pred -------------------CCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 291 -------------------ALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 291 -------------------~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
....++|+|++|.||+++++..+.|.||+.+..
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766677999997653
No 258
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.36 E-value=4.8e-13 Score=128.36 Aligned_cols=93 Identities=35% Similarity=0.573 Sum_probs=86.7
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
.++++++|+.|+|++|++++.+|. +..+++|++|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|..+.++++.
T Consensus 216 ~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~ 294 (313)
T 1ogq_A 216 LFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFD 294 (313)
T ss_dssp GCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSC
T ss_pred HHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccC
Confidence 467889999999999999977766 8899999999999999999999999999999999999999999999988899999
Q ss_pred ccccccccccCCCC
Q 044428 82 TESFSWNYALCGPS 95 (457)
Q Consensus 82 ~~~~~~n~~lcg~~ 95 (457)
.+.+.+|+.+||.+
T Consensus 295 ~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 295 VSAYANNKCLCGSP 308 (313)
T ss_dssp GGGTCSSSEEESTT
T ss_pred hHHhcCCCCccCCC
Confidence 99999999999975
No 259
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.32 E-value=2e-12 Score=114.89 Aligned_cols=91 Identities=24% Similarity=0.349 Sum_probs=75.3
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~ 81 (457)
++++++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..|..+..+++|+.|+|++|++++.+|. ...+.++.
T Consensus 50 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 129 (192)
T 1w8a_A 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129 (192)
T ss_dssp GGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCC
T ss_pred cccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCC
Confidence 67788889999999999887788888899999999999999877777788888899999999999888764 35567788
Q ss_pred ccccccccccCC
Q 044428 82 TESFSWNYALCG 93 (457)
Q Consensus 82 ~~~~~~n~~lcg 93 (457)
.+.+++|+..|.
T Consensus 130 ~L~L~~N~l~c~ 141 (192)
T 1w8a_A 130 SLNLASNPFNCN 141 (192)
T ss_dssp EEECTTCCBCCS
T ss_pred EEEeCCCCccCc
Confidence 888888887653
No 260
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.29 E-value=4.4e-12 Score=112.70 Aligned_cols=92 Identities=22% Similarity=0.265 Sum_probs=67.1
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~ 80 (457)
.++++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++.++. ...+.++
T Consensus 49 ~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 128 (193)
T 2wfh_A 49 ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSAL 128 (193)
T ss_dssp GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTC
T ss_pred HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccc
Confidence 356677788888888888765556777788888888888888865556777778888888888888766653 3456677
Q ss_pred cccccccccccCC
Q 044428 81 STESFSWNYALCG 93 (457)
Q Consensus 81 ~~~~~~~n~~lcg 93 (457)
..+.+++|++.|.
T Consensus 129 ~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 129 SHLAIGANPLYCD 141 (193)
T ss_dssp CEEECCSSCEECS
T ss_pred cEEEeCCCCeecC
Confidence 7777888877663
No 261
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.27 E-value=9e-12 Score=108.73 Aligned_cols=87 Identities=25% Similarity=0.305 Sum_probs=77.4
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccccCCCCCCC-CCCcccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFSTES 84 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~~ 84 (457)
++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++ +|. .+.++++|+.|+|++|+|++.++. ...+.++..+.
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIY 111 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc-cChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEE
Confidence 689999999999998888999999999999999999995 555 568999999999999999988875 56678899999
Q ss_pred cccccccCCC
Q 044428 85 FSWNYALCGP 94 (457)
Q Consensus 85 ~~~n~~lcg~ 94 (457)
+++|+..|.+
T Consensus 112 L~~N~~~c~~ 121 (174)
T 2r9u_A 112 LYNNPWDCEC 121 (174)
T ss_dssp CCSSCBCTTB
T ss_pred eCCCCccccc
Confidence 9999987754
No 262
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.27 E-value=9.5e-12 Score=108.16 Aligned_cols=88 Identities=23% Similarity=0.206 Sum_probs=78.1
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFSTESF 85 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~~~ 85 (457)
++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..|..+..+++|+.|+|++|+|++.+|. ...+.++..+.+
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 6899999999999987789999999999999999999955555678999999999999999998885 567788999999
Q ss_pred ccccccCCC
Q 044428 86 SWNYALCGP 94 (457)
Q Consensus 86 ~~n~~lcg~ 94 (457)
++|+..|..
T Consensus 110 ~~N~~~c~c 118 (170)
T 3g39_A 110 LNNPWDCAC 118 (170)
T ss_dssp CSSCBCTTB
T ss_pred CCCCCCCCc
Confidence 999987754
No 263
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.27 E-value=8.7e-12 Score=115.83 Aligned_cols=138 Identities=15% Similarity=0.064 Sum_probs=100.9
Q ss_pred cCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCc--cceeeeeeecCCeeEEEEecc
Q 044428 174 EFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRN--LIKILSGCSNLDFKALVLEFM 251 (457)
Q Consensus 174 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~ 251 (457)
++......+.|..+.||++...+|..+++|+.... ....+.+|+.+++.+.+.+ +.+++++....+..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34433333456669999998877888999997643 2345788999999986544 455888888777889999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 044428 252 PNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH----------------------------------------- 290 (457)
Q Consensus 252 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 290 (457)
+|.+|. ... .+ ...++.+++..+..||...
T Consensus 98 ~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998884 211 11 2356778888888888421
Q ss_pred -------------CCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 291 -------------ALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 291 -------------~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
....++|+|++|.||+++++..+.|.||+.+..
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 012399999999999998876777999998764
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.27 E-value=8.7e-12 Score=113.19 Aligned_cols=86 Identities=21% Similarity=0.143 Sum_probs=46.4
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~ 81 (457)
++++++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..|..+..+++|+.|+|++|++++..|. ...+.++.
T Consensus 53 ~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (220)
T 2v70_A 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR 132 (220)
T ss_dssp GGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS
T ss_pred hccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC
Confidence 44555666666666666544444555566666666666666544444455555555555555555555442 23334444
Q ss_pred ccccccc
Q 044428 82 TESFSWN 88 (457)
Q Consensus 82 ~~~~~~n 88 (457)
.+.+++|
T Consensus 133 ~L~L~~N 139 (220)
T 2v70_A 133 LLSLYDN 139 (220)
T ss_dssp EEECTTS
T ss_pred EEECCCC
Confidence 5555554
No 265
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.26 E-value=4.5e-12 Score=136.50 Aligned_cols=89 Identities=31% Similarity=0.456 Sum_probs=82.6
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~ 80 (457)
.++++++|+.|+|++|+|+|.+|.+|++|++|+.|+|++|+|+|.||..++++++|+.|||++|+++|.+|.. ..+..+
T Consensus 627 ~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L 706 (768)
T 3rgz_A 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 706 (768)
T ss_dssp SCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCC
T ss_pred hhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCC
Confidence 4678899999999999999999999999999999999999999999999999999999999999999999964 566788
Q ss_pred cccccccccc
Q 044428 81 STESFSWNYA 90 (457)
Q Consensus 81 ~~~~~~~n~~ 90 (457)
..+.+++|+-
T Consensus 707 ~~L~ls~N~l 716 (768)
T 3rgz_A 707 TEIDLSNNNL 716 (768)
T ss_dssp SEEECCSSEE
T ss_pred CEEECcCCcc
Confidence 8899999853
No 266
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1.3e-11 Score=120.03 Aligned_cols=91 Identities=20% Similarity=0.163 Sum_probs=80.2
Q ss_pred ccCCccCCeeeccC-CcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 3 IGGLKDLATLSLAA-NKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~-N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
|+.+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|.++++|+.|+|++|+|++.+|.......+.
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~L~ 106 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQ 106 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCCC
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCCce
Confidence 67888999999996 99997777889999999999999999998888899999999999999999999887654433488
Q ss_pred ccccccccccCC
Q 044428 82 TESFSWNYALCG 93 (457)
Q Consensus 82 ~~~~~~n~~lcg 93 (457)
.+.+.+|+..|.
T Consensus 107 ~l~l~~N~~~c~ 118 (347)
T 2ifg_A 107 ELVLSGNPLHCS 118 (347)
T ss_dssp EEECCSSCCCCC
T ss_pred EEEeeCCCccCC
Confidence 889999988774
No 267
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.22 E-value=2.6e-11 Score=110.08 Aligned_cols=87 Identities=29% Similarity=0.347 Sum_probs=59.1
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCcc-chhcCCCceEecccccCCCCCCC-CCCccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKS-LEALLYLKQLNVSQNRLEGEIPV-EGPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~-~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~ 79 (457)
.++++++|+.|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. +..+++|+.|+|++|++++..|. ...+.+
T Consensus 51 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 129 (220)
T 2v9t_B 51 AFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 129 (220)
T ss_dssp SSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred HhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCC
Confidence 4566777777777777777666777777777777777777777 45543 56677777777777777776553 234455
Q ss_pred cccccccccc
Q 044428 80 FSTESFSWNY 89 (457)
Q Consensus 80 ~~~~~~~~n~ 89 (457)
+..+.+++|.
T Consensus 130 L~~L~L~~N~ 139 (220)
T 2v9t_B 130 LNLLSLYDNK 139 (220)
T ss_dssp CCEEECCSSC
T ss_pred CCEEECCCCc
Confidence 6666666664
No 268
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.21 E-value=5.4e-12 Score=128.57 Aligned_cols=30 Identities=17% Similarity=0.157 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhcCCCccceeeeeeecCC
Q 044428 213 FVSFNSECEVLRNVRHRNLIKILSGCSNLD 242 (457)
Q Consensus 213 ~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 242 (457)
..+|.+|++.+++++|+|+|+++|||....
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 567999999999999999999999998753
No 269
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.19 E-value=4.7e-11 Score=109.04 Aligned_cols=88 Identities=25% Similarity=0.331 Sum_probs=43.4
Q ss_pred cCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccccc
Q 044428 4 GGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFST 82 (457)
Q Consensus 4 ~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~ 82 (457)
+++++|+.|+|++|+|++..|..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+. ...+.++..
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 163 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 44455555555555555333333445555555555555555 5555555555555555555555544432 233444555
Q ss_pred cccccccccC
Q 044428 83 ESFSWNYALC 92 (457)
Q Consensus 83 ~~~~~n~~lc 92 (457)
+.+.+|+..|
T Consensus 164 L~l~~N~~~c 173 (229)
T 3e6j_A 164 AYLFGNPWDC 173 (229)
T ss_dssp EECTTSCBCT
T ss_pred EEeeCCCccC
Confidence 5555555444
No 270
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.19 E-value=5.5e-11 Score=103.89 Aligned_cols=88 Identities=23% Similarity=0.185 Sum_probs=42.3
Q ss_pred cCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCcccccc
Q 044428 4 GGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFST 82 (457)
Q Consensus 4 ~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~~ 82 (457)
+++++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..|..+..+++|+.|+|++|++++.++.. ..+.++..
T Consensus 49 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 128 (177)
T 2o6r_A 49 DKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQK 128 (177)
T ss_dssp TTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCE
Confidence 44555555555555555333333455555555555555555333333445555555555555555444332 23444455
Q ss_pred ccccccccc
Q 044428 83 ESFSWNYAL 91 (457)
Q Consensus 83 ~~~~~n~~l 91 (457)
+.+++|+..
T Consensus 129 L~l~~N~~~ 137 (177)
T 2o6r_A 129 IWLHTNPWD 137 (177)
T ss_dssp EECCSSCBC
T ss_pred EEecCCCee
Confidence 555555443
No 271
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.11 E-value=9.1e-11 Score=122.97 Aligned_cols=92 Identities=25% Similarity=0.291 Sum_probs=82.2
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCc-cc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPF-RN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~-~~ 79 (457)
.++.+++|+.|+|++|+|++..|..|++|++|++|+|++|+|++..|..+..+++|+.|+|++|+|++.+|.. ..+ .+
T Consensus 489 ~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~ 568 (635)
T 4g8a_A 489 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 568 (635)
T ss_dssp CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTT
T ss_pred hhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCc
Confidence 4678999999999999999888999999999999999999999777788999999999999999999998864 333 56
Q ss_pred ccccccccccccCC
Q 044428 80 FSTESFSWNYALCG 93 (457)
Q Consensus 80 ~~~~~~~~n~~lcg 93 (457)
+..+.+++|++.|.
T Consensus 569 L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 569 LAFLNLTQNDFACT 582 (635)
T ss_dssp CCEEECTTCCBCCS
T ss_pred CCEEEeeCCCCccc
Confidence 88899999999884
No 272
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.11 E-value=1.8e-10 Score=106.55 Aligned_cols=87 Identities=29% Similarity=0.308 Sum_probs=55.5
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~ 81 (457)
++++++|+.|+|++|+|++..|..|+.+++|++|+|++|+|++..|..+..+++|+.|+|++|++++.+|. ...+.++.
T Consensus 79 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 158 (251)
T 3m19_A 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158 (251)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCC
Confidence 55667777777777777754445566777777777777777743333456667777777777777666552 34455666
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 159 ~L~L~~N~ 166 (251)
T 3m19_A 159 TLSLSTNQ 166 (251)
T ss_dssp EEECCSSC
T ss_pred EEECCCCc
Confidence 66666664
No 273
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.11 E-value=2.3e-10 Score=102.60 Aligned_cols=87 Identities=25% Similarity=0.263 Sum_probs=57.1
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~ 81 (457)
++++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|++++.++. ...+.++.
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 127 (208)
T 2o6s_A 48 FDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLK 127 (208)
T ss_dssp TTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCC
Confidence 45677777777777777744344567777777777777777744344466777777777777777766554 24455666
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 128 ~L~l~~N~ 135 (208)
T 2o6s_A 128 DLRLYQNQ 135 (208)
T ss_dssp EEECCSSC
T ss_pred EEECCCCc
Confidence 66666664
No 274
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.08 E-value=5.6e-11 Score=105.41 Aligned_cols=72 Identities=29% Similarity=0.385 Sum_probs=67.6
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV 73 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~ 73 (457)
.++++++|+.|+|++|+|++..|..|+.+++|++|+|++|+|++.+|..+..+++|+.|+|++|++++..+.
T Consensus 73 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 73 AFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp TTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred HcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 578899999999999999988888899999999999999999999999999999999999999999988763
No 275
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.08 E-value=3.1e-10 Score=106.38 Aligned_cols=87 Identities=22% Similarity=0.249 Sum_probs=50.9
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~ 81 (457)
++++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+..+++|+.|++++|++++.+|.. ..+.++.
T Consensus 105 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 184 (272)
T 3rfs_A 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLK 184 (272)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCC
Confidence 455666666666666666544445666666666666666666444444556666666666666666555432 3445555
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 185 ~L~L~~N~ 192 (272)
T 3rfs_A 185 DLRLYQNQ 192 (272)
T ss_dssp EEECCSSC
T ss_pred EEECCCCc
Confidence 55555553
No 276
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.08 E-value=2e-10 Score=104.08 Aligned_cols=92 Identities=23% Similarity=0.259 Sum_probs=73.9
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~ 80 (457)
.++++++|+.|+|++|+|++..|..|+.+++|++|+|++|+|++..|..+..+++|+.|+|++|++++..|. ...+.++
T Consensus 76 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 155 (220)
T 2v70_A 76 AFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSL 155 (220)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTC
T ss_pred HhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCC
Confidence 467888888888888888866666788888888888888888877788888888888888888888888664 3456677
Q ss_pred cccccccccccCC
Q 044428 81 STESFSWNYALCG 93 (457)
Q Consensus 81 ~~~~~~~n~~lcg 93 (457)
..+.+++|++.|.
T Consensus 156 ~~L~L~~N~l~c~ 168 (220)
T 2v70_A 156 STLNLLANPFNCN 168 (220)
T ss_dssp CEEECCSCCEECS
T ss_pred CEEEecCcCCcCC
Confidence 7888888887664
No 277
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.08 E-value=2.4e-10 Score=111.63 Aligned_cols=142 Identities=15% Similarity=0.178 Sum_probs=105.9
Q ss_pred CCccCCCCceEEEEEEeCCCCEEEEEEec--ccc-hhhHHHHHHHHHHHhhcC--CCccceeeeeeecC---CeeEEEEe
Q 044428 178 CNLLGIGSFGSVYKGTLSDGTNVAIKIFN--LQL-ERTFVSFNSECEVLRNVR--HRNLIKILSGCSNL---DFKALVLE 249 (457)
Q Consensus 178 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e 249 (457)
.+.++.|.++.||+....+ ..+++|+.. ... ......+.+|..+++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4578999999999998754 678889876 332 123456888999999997 45678888888776 45899999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH--------------------------------------- 290 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------------- 290 (457)
|++|..+.+... ..++..++..++.+++.+|..||...
T Consensus 122 ~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 122 FVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp CCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred ecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 999987754211 22677888899999999999999621
Q ss_pred ---------------CCCCeeeccCCCCCeeecCCCc--EEEeccccccc
Q 044428 291 ---------------ALAPIIHCDLKPSNILLDENMV--AHVSDFGISKL 323 (457)
Q Consensus 291 ---------------~~~~ivH~dlk~~NIll~~~~~--~kl~Dfg~~~~ 323 (457)
....++|+|+++.||++++++. +.|.||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 0256999999999999997753 68999998875
No 278
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.07 E-value=5.6e-11 Score=113.90 Aligned_cols=89 Identities=30% Similarity=0.453 Sum_probs=75.1
Q ss_pred CccCCccCCeeecc-CCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccc
Q 044428 2 TIGGLKDLATLSLA-ANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~-~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~ 79 (457)
+++++++|+.|+|+ +|+++|.+|..|+++++|++|+|++|+++|.+|..+.++++|+.|+|++|++++.+|. ...+++
T Consensus 71 ~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 150 (313)
T 1ogq_A 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred hHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCC
Confidence 46788899999999 4899989999999999999999999999988999899999999999999999887774 355677
Q ss_pred ccccccccccc
Q 044428 80 FSTESFSWNYA 90 (457)
Q Consensus 80 ~~~~~~~~n~~ 90 (457)
+..+.+++|..
T Consensus 151 L~~L~L~~N~l 161 (313)
T 1ogq_A 151 LVGITFDGNRI 161 (313)
T ss_dssp CCEEECCSSCC
T ss_pred CCeEECcCCcc
Confidence 88888888753
No 279
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.06 E-value=3.3e-10 Score=102.72 Aligned_cols=89 Identities=29% Similarity=0.410 Sum_probs=46.9
Q ss_pred ccCCccCCeeeccCCcccccCCc-ccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPK-SFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNF 80 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~ 80 (457)
|+++++|+.|+|++|+|+ .+|. .|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|++++..+. ...+.++
T Consensus 76 ~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 154 (220)
T 2v9t_B 76 FQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 154 (220)
T ss_dssp TTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred hhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCC
Confidence 445555555555555555 3333 245555555555555555544455555555555555555555555443 2334445
Q ss_pred cccccccccccC
Q 044428 81 STESFSWNYALC 92 (457)
Q Consensus 81 ~~~~~~~n~~lc 92 (457)
..+.+++|++.|
T Consensus 155 ~~L~L~~N~~~c 166 (220)
T 2v9t_B 155 QTMHLAQNPFIC 166 (220)
T ss_dssp CEEECCSSCEEC
T ss_pred CEEEeCCCCcCC
Confidence 555555555544
No 280
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.04 E-value=2.1e-10 Score=118.82 Aligned_cols=86 Identities=22% Similarity=0.269 Sum_probs=64.1
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCC-C-CCCCccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEI-P-VEGPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~-p-~~~~~~~ 79 (457)
.+++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ | ..+.+++
T Consensus 458 ~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~ 534 (567)
T 1dce_A 458 HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR 534 (567)
T ss_dssp CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTT
T ss_pred CccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCC
Confidence 3667777888888888887 778778888888888888888874 66 7777788888888888887774 3 4456667
Q ss_pred ccccccccccc
Q 044428 80 FSTESFSWNYA 90 (457)
Q Consensus 80 ~~~~~~~~n~~ 90 (457)
+..+.+++|+.
T Consensus 535 L~~L~L~~N~l 545 (567)
T 1dce_A 535 LVLLNLQGNSL 545 (567)
T ss_dssp CCEEECTTSGG
T ss_pred CCEEEecCCcC
Confidence 77777777753
No 281
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.04 E-value=1.3e-10 Score=100.51 Aligned_cols=86 Identities=22% Similarity=0.194 Sum_probs=72.9
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCC--CCCCCcccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEI--PVEGPFRNF 80 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~--p~~~~~~~~ 80 (457)
++.+++|+.|+|++|+|++. ..++.+++|++|+|++|++++.+|..+..+++|+.|+|++|++++.. +....++++
T Consensus 45 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L 122 (168)
T 2ell_A 45 TAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECL 122 (168)
T ss_dssp CGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCC
T ss_pred HHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCC
Confidence 47789999999999999854 78899999999999999999778888888999999999999998864 455667788
Q ss_pred cccccccccc
Q 044428 81 STESFSWNYA 90 (457)
Q Consensus 81 ~~~~~~~n~~ 90 (457)
..+.+++|+.
T Consensus 123 ~~L~l~~N~l 132 (168)
T 2ell_A 123 KSLDLFNCEV 132 (168)
T ss_dssp CEEECCSSGG
T ss_pred CEEEeeCCcC
Confidence 8888888854
No 282
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.04 E-value=1.8e-10 Score=97.44 Aligned_cols=82 Identities=26% Similarity=0.276 Sum_probs=56.0
Q ss_pred CccCCeeeccCCccc-ccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCccccccc
Q 044428 6 LKDLATLSLAANKFH-GPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFSTE 83 (457)
Q Consensus 6 l~~L~~l~l~~N~l~-g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~~~ 83 (457)
.++|+.|+|++|+++ |.+|..++.+++|+.|+|++|++++. ..+..+++|+.|++++|++++.+|.. ..++++..+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 466777777777777 67777777777777777777777743 56667777777777777777755543 235566666
Q ss_pred cccccc
Q 044428 84 SFSWNY 89 (457)
Q Consensus 84 ~~~~n~ 89 (457)
.+++|.
T Consensus 94 ~ls~N~ 99 (149)
T 2je0_A 94 NLSGNK 99 (149)
T ss_dssp ECTTSC
T ss_pred ECCCCc
Confidence 666664
No 283
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.03 E-value=5.5e-10 Score=105.73 Aligned_cols=88 Identities=22% Similarity=0.155 Sum_probs=62.5
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~ 81 (457)
++++++|+.|+|++|+|++..|..|+.+++|++|+|++|+|++..|..+..+++|+.|+|++|+|++.++.. ..+.++.
T Consensus 96 ~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 175 (290)
T 1p9a_G 96 GQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD 175 (290)
T ss_dssp TTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCC
T ss_pred hccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCC
Confidence 566778888888888888555567888888888888888888444445677788888888888887666543 3455666
Q ss_pred ccccccccc
Q 044428 82 TESFSWNYA 90 (457)
Q Consensus 82 ~~~~~~n~~ 90 (457)
.+.+++|..
T Consensus 176 ~L~L~~N~l 184 (290)
T 1p9a_G 176 TLLLQENSL 184 (290)
T ss_dssp EEECCSSCC
T ss_pred EEECCCCcC
Confidence 666666643
No 284
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.02 E-value=2e-10 Score=124.87 Aligned_cols=87 Identities=30% Similarity=0.392 Sum_probs=74.6
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFST 82 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~ 82 (457)
+++|++|+.|+|++|+|++..|..|+.+++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|.. |.++..
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~ 551 (844)
T 3j0a_A 476 FEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSV 551 (844)
T ss_dssp SSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCE
T ss_pred hcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCE
Confidence 66789999999999999988888899999999999999999954444444 78999999999999998854 668889
Q ss_pred cccccccccCC
Q 044428 83 ESFSWNYALCG 93 (457)
Q Consensus 83 ~~~~~n~~lcg 93 (457)
+.+++|++.|.
T Consensus 552 l~l~~Np~~C~ 562 (844)
T 3j0a_A 552 LDITHNKFICE 562 (844)
T ss_dssp EEEEEECCCCS
T ss_pred EEecCCCcccc
Confidence 99999999984
No 285
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.01 E-value=7e-11 Score=100.06 Aligned_cols=87 Identities=21% Similarity=0.191 Sum_probs=76.2
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCC--CCCCCccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEI--PVEGPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~--p~~~~~~~ 79 (457)
.++.+++|+.|+|++|++++. ..++++++|++|+|++|++++.+|..+..+++|+.|++++|++++.. +....+++
T Consensus 37 ~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~ 114 (149)
T 2je0_A 37 LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLEN 114 (149)
T ss_dssp CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTT
T ss_pred HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCC
Confidence 357899999999999999965 88999999999999999999879998889999999999999999853 45566778
Q ss_pred ccccccccccc
Q 044428 80 FSTESFSWNYA 90 (457)
Q Consensus 80 ~~~~~~~~n~~ 90 (457)
+..+.+++|..
T Consensus 115 L~~L~l~~N~l 125 (149)
T 2je0_A 115 LKSLDLFNCEV 125 (149)
T ss_dssp CCEEECTTCGG
T ss_pred CCEEeCcCCcc
Confidence 88899998853
No 286
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.01 E-value=3.7e-10 Score=97.61 Aligned_cols=84 Identities=26% Similarity=0.296 Sum_probs=73.8
Q ss_pred CCccCCeeeccCCccc-ccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCC-Ccccccc
Q 044428 5 GLKDLATLSLAANKFH-GPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEG-PFRNFST 82 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~-g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~-~~~~~~~ 82 (457)
..++|+.|+|++|+++ |.+|..+..+++|+.|+|++|++++ + ..+..+++|+.|+|++|++++.+|... .++++..
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-V-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCC-C-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCC-h-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4578999999999998 8999999999999999999999995 4 788999999999999999999777543 3778888
Q ss_pred cccccccc
Q 044428 83 ESFSWNYA 90 (457)
Q Consensus 83 ~~~~~n~~ 90 (457)
+.+++|..
T Consensus 100 L~Ls~N~l 107 (168)
T 2ell_A 100 LNLSGNKL 107 (168)
T ss_dssp EECBSSSC
T ss_pred EeccCCcc
Confidence 89988853
No 287
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.01 E-value=2.2e-10 Score=101.95 Aligned_cols=87 Identities=18% Similarity=0.255 Sum_probs=53.2
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFST 82 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~ 82 (457)
++++++|+.|+|++|++++..|..|+.+++|++|+|++|++++..|..+..+++|+.|++++|++.+.+|....++++..
T Consensus 84 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~ 163 (197)
T 4ezg_A 84 ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKS 163 (197)
T ss_dssp GTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCE
T ss_pred hhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCE
Confidence 45566666666666666665666666666666666666666665666666666666666666663333344444555566
Q ss_pred ccccccc
Q 044428 83 ESFSWNY 89 (457)
Q Consensus 83 ~~~~~n~ 89 (457)
+.+++|.
T Consensus 164 L~l~~n~ 170 (197)
T 4ezg_A 164 LNIQFDG 170 (197)
T ss_dssp EECTTBC
T ss_pred EECCCCC
Confidence 6665553
No 288
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.01 E-value=6.7e-10 Score=101.31 Aligned_cols=82 Identities=26% Similarity=0.308 Sum_probs=44.4
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCC-ccchhcCCCceEecccccCCCCCCCC-CCcccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIP-KSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFSTES 84 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p-~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~~~~ 84 (457)
++|+.|+|++|+|++..|..|+++++|++|+|++|+|+ .+| ..+..+++|+.|+|++|+|++.++.. ..+.++..+.
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 44556666666666555555555666666666666665 333 33455556666666666665554432 3344555555
Q ss_pred ccccc
Q 044428 85 FSWNY 89 (457)
Q Consensus 85 ~~~n~ 89 (457)
+++|.
T Consensus 119 Ls~N~ 123 (229)
T 3e6j_A 119 MCCNK 123 (229)
T ss_dssp CCSSC
T ss_pred ccCCc
Confidence 55543
No 289
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.00 E-value=7.6e-10 Score=102.34 Aligned_cols=86 Identities=22% Similarity=0.257 Sum_probs=41.0
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~ 81 (457)
++++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|++++.++.. ..+.++.
T Consensus 55 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 134 (251)
T 3m19_A 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLK 134 (251)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCccc
Confidence 344455555555555555444444455555555555555555333334444555555555555555444432 2334444
Q ss_pred ccccccc
Q 044428 82 TESFSWN 88 (457)
Q Consensus 82 ~~~~~~n 88 (457)
.+.+++|
T Consensus 135 ~L~Ls~N 141 (251)
T 3m19_A 135 ELRLNTN 141 (251)
T ss_dssp EEECCSS
T ss_pred EEECcCC
Confidence 4444444
No 290
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.00 E-value=5.1e-10 Score=112.70 Aligned_cols=90 Identities=27% Similarity=0.239 Sum_probs=44.9
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~ 81 (457)
++++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+..+++|+.|+|++|++++.++.. ..++++.
T Consensus 319 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 398 (455)
T 3v47_A 319 FWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQ 398 (455)
T ss_dssp TTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCccc
Confidence 344455555555555554444444555555555555555555444455555555555555555555444322 3344455
Q ss_pred ccccccccccC
Q 044428 82 TESFSWNYALC 92 (457)
Q Consensus 82 ~~~~~~n~~lc 92 (457)
.+.+++|+..|
T Consensus 399 ~L~l~~N~l~~ 409 (455)
T 3v47_A 399 KIWLHTNPWDC 409 (455)
T ss_dssp EEECCSSCBCC
T ss_pred EEEccCCCccc
Confidence 55555555444
No 291
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.00 E-value=4.8e-10 Score=108.13 Aligned_cols=88 Identities=17% Similarity=0.194 Sum_probs=76.6
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~ 80 (457)
.++++++|+.|+|++|+++ .+|+.++++++|++|+|++|++.|.+|..+..+++|+.|+|++|++.+.+|. ...+.++
T Consensus 201 ~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 279 (328)
T 4fcg_A 201 SIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQL 279 (328)
T ss_dssp GGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTC
T ss_pred hhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCC
Confidence 4678899999999999999 5888899999999999999999999999999999999999999999998885 3566778
Q ss_pred cccccccccc
Q 044428 81 STESFSWNYA 90 (457)
Q Consensus 81 ~~~~~~~n~~ 90 (457)
..+.+++|+.
T Consensus 280 ~~L~L~~n~~ 289 (328)
T 4fcg_A 280 EKLDLRGCVN 289 (328)
T ss_dssp CEEECTTCTT
T ss_pred CEEeCCCCCc
Confidence 8888888764
No 292
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.00 E-value=9.5e-10 Score=102.85 Aligned_cols=86 Identities=27% Similarity=0.298 Sum_probs=46.4
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~ 81 (457)
++++++|+.|+|++|++++..|..|+++++|++|+|++|+|++..+..+..+++|+.|+|++|++++..+. ...+.++.
T Consensus 105 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 184 (270)
T 2o6q_A 105 FDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELK 184 (270)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred cccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcC
Confidence 34556666666666666644444556666666666666666632223355555666666666665555442 22334444
Q ss_pred ccccccc
Q 044428 82 TESFSWN 88 (457)
Q Consensus 82 ~~~~~~n 88 (457)
.+.+++|
T Consensus 185 ~L~L~~N 191 (270)
T 2o6q_A 185 TLKLDNN 191 (270)
T ss_dssp EEECCSS
T ss_pred EEECCCC
Confidence 4555544
No 293
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.99 E-value=5.2e-10 Score=112.38 Aligned_cols=92 Identities=21% Similarity=0.255 Sum_probs=69.7
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~ 80 (457)
.++.+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..+.++++|+.|+|++|+|++.++.. ..+.++
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 3556677777777777777766777888888888888888888766777788888888888888888766643 456677
Q ss_pred cccccccccccCC
Q 044428 81 STESFSWNYALCG 93 (457)
Q Consensus 81 ~~~~~~~n~~lcg 93 (457)
..+.+++|++.|.
T Consensus 282 ~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 282 ERIHLHHNPWNCN 294 (440)
T ss_dssp CEEECCSSCEECS
T ss_pred CEEEcCCCCccCC
Confidence 7888888888774
No 294
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.99 E-value=7.1e-10 Score=98.32 Aligned_cols=84 Identities=27% Similarity=0.310 Sum_probs=75.3
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFSTESF 85 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~~~ 85 (457)
++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|. ...+.++..+.+
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 57999999999999 8999999999999999999999977677899999999999999999998874 456778888999
Q ss_pred cccccc
Q 044428 86 SWNYAL 91 (457)
Q Consensus 86 ~~n~~l 91 (457)
++|...
T Consensus 110 ~~N~l~ 115 (193)
T 2wfh_A 110 HGNDIS 115 (193)
T ss_dssp CSSCCC
T ss_pred CCCCCC
Confidence 998643
No 295
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.98 E-value=2.4e-10 Score=108.91 Aligned_cols=186 Identities=16% Similarity=0.162 Sum_probs=121.5
Q ss_pred CCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcC-CCc--cceeeeeeecCC---eeEEEEecc
Q 044428 178 CNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-HRN--LIKILSGCSNLD---FKALVLEFM 251 (457)
Q Consensus 178 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 251 (457)
.+.++.|.+..||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++......+ ..++||+|+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568899999999864 46899986533 33456889999998884 332 334444443333 357899999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 044428 252 PNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH----------------------------------------- 290 (457)
Q Consensus 252 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 290 (457)
+|.+|.+.... .++..++..++.+++..+..||...
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888754332 2667778888888888888888511
Q ss_pred -------------CCCCeeeccCCCCCeeecC--CCcEEEeccccccccCCCCCcceeccc---ccc-------ccc--c
Q 044428 291 -------------ALAPIIHCDLKPSNILLDE--NMVAHVSDFGISKLLGEGDDSLIQTKT---MAT-------IGY--M 343 (457)
Q Consensus 291 -------------~~~~ivH~dlk~~NIll~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~---~gt-------~~y--~ 343 (457)
....++|+|++|.||++++ +..+.|.||+.+....+..+....... .+. ..| .
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 1235899999999999998 556889999988764321110000000 000 011 1
Q ss_pred C-CCCC--CCCccchhhhhHHHHHHhcCCCCC
Q 044428 344 A-PEGI--VSTKCDVYSYGILLLETFSRKKPT 372 (457)
Q Consensus 344 a-PE~~--~~~~~Dv~s~Gvvl~el~tg~~p~ 372 (457)
. |+.. .....+.|++|.++|++.+|..+|
T Consensus 256 ~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 256 DIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1 1100 111358999999999999998765
No 296
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.98 E-value=5.9e-10 Score=112.37 Aligned_cols=93 Identities=25% Similarity=0.264 Sum_probs=70.4
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~ 80 (457)
.++.+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|+|++.++.. ..+.++
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 292 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYL 292 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTC
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCC
Confidence 3556677777777777777767777888888888888888888777777888888888888888888766543 456677
Q ss_pred cccccccccccCCC
Q 044428 81 STESFSWNYALCGP 94 (457)
Q Consensus 81 ~~~~~~~n~~lcg~ 94 (457)
..+.+++|++.|..
T Consensus 293 ~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 293 VELHLHHNPWNCDC 306 (452)
T ss_dssp CEEECCSSCEECST
T ss_pred CEEEccCCCcCCCC
Confidence 78888888877753
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.98 E-value=4.7e-10 Score=105.73 Aligned_cols=86 Identities=26% Similarity=0.241 Sum_probs=46.2
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~ 81 (457)
++++++|+.|+|++|++++..+..|+++++|++|+|++|++++..+..+..+++|+.|++++|++++..|. ...++++.
T Consensus 125 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 204 (285)
T 1ozn_A 125 FRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLM 204 (285)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred hhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCccccc
Confidence 44556666666666666643334456666666666666666632223455556666666666666555442 23334445
Q ss_pred ccccccc
Q 044428 82 TESFSWN 88 (457)
Q Consensus 82 ~~~~~~n 88 (457)
.+.+++|
T Consensus 205 ~L~l~~n 211 (285)
T 1ozn_A 205 TLYLFAN 211 (285)
T ss_dssp EEECCSS
T ss_pred EeeCCCC
Confidence 5555554
No 298
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=98.98 E-value=5.4e-10 Score=107.74 Aligned_cols=86 Identities=21% Similarity=0.238 Sum_probs=77.6
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~ 81 (457)
++++++|+.|+|++|+|+ .+|.+++++++|++|+|++|+++ .+|..+..+++|+.|+|++|++.+.+|. .+.+.++.
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 456999999999999999 99999999999999999999999 6888999999999999999999999886 35677888
Q ss_pred ccccccccc
Q 044428 82 TESFSWNYA 90 (457)
Q Consensus 82 ~~~~~~n~~ 90 (457)
.+.+++|..
T Consensus 257 ~L~L~~n~~ 265 (328)
T 4fcg_A 257 RLILKDCSN 265 (328)
T ss_dssp EEECTTCTT
T ss_pred EEECCCCCc
Confidence 888988754
No 299
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.97 E-value=5.9e-10 Score=118.89 Aligned_cols=85 Identities=26% Similarity=0.235 Sum_probs=54.0
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFST 82 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~ 82 (457)
+.+|++|+.|+|++|+|+ .||.+|++|++|++|+|++|+|+ .||..++++++|+.|+|++|.|+..++..+.+.++..
T Consensus 243 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~ 320 (727)
T 4b8c_D 243 IFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQF 320 (727)
T ss_dssp GGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCC
T ss_pred hcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccE
Confidence 345666666666666666 66666666666666666666666 6666666666666666666666644334455556666
Q ss_pred ccccccc
Q 044428 83 ESFSWNY 89 (457)
Q Consensus 83 ~~~~~n~ 89 (457)
+.+++|.
T Consensus 321 L~L~~N~ 327 (727)
T 4b8c_D 321 LGVEGNP 327 (727)
T ss_dssp EECTTSC
T ss_pred EeCCCCc
Confidence 6666664
No 300
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=98.97 E-value=1.5e-09 Score=97.25 Aligned_cols=84 Identities=23% Similarity=0.195 Sum_probs=54.8
Q ss_pred CccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCcccccccc
Q 044428 6 LKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFSTES 84 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~~~~ 84 (457)
.++|+.|+|++|++++..+..|+++++|++|+|++|++++..+..+..+++|+.|+|++|++++.++.. ..+.++..+.
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 346777777777777444445677777777777777777433334566777777777777777665542 4556666666
Q ss_pred ccccc
Q 044428 85 FSWNY 89 (457)
Q Consensus 85 ~~~n~ 89 (457)
+++|.
T Consensus 107 L~~N~ 111 (208)
T 2o6s_A 107 LNTNQ 111 (208)
T ss_dssp CCSSC
T ss_pred cCCCc
Confidence 66664
No 301
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=98.95 E-value=1.2e-09 Score=94.74 Aligned_cols=72 Identities=21% Similarity=0.236 Sum_probs=63.4
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV 73 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~ 73 (457)
.++++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|+++...+.
T Consensus 49 ~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 49 VFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp TTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred hhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 478899999999999999965556689999999999999999955555699999999999999999988763
No 302
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.95 E-value=6.8e-10 Score=116.07 Aligned_cols=70 Identities=31% Similarity=0.324 Sum_probs=34.1
Q ss_pred ccCCccCCeeeccCCccccc-CCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCC
Q 044428 3 IGGLKDLATLSLAANKFHGP-IPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIP 72 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~-~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p 72 (457)
++++++|+.|+|++|++++. +|..|+.+++|+.|+|++|++++..|..+.++++|+.|+|++|++++.+|
T Consensus 444 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 514 (606)
T 3vq2_A 444 FLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDS 514 (606)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEG
T ss_pred hcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCH
Confidence 34445555555555555442 44444555555555555555554444444444555555555555544433
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.94 E-value=1.5e-09 Score=103.38 Aligned_cols=88 Identities=28% Similarity=0.360 Sum_probs=61.6
Q ss_pred ccCCccCCeeeccCCcccc-cCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccc
Q 044428 3 IGGLKDLATLSLAANKFHG-PIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNF 80 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g-~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~ 80 (457)
++++++|+.|+|++|++++ .+|..++.+++|++|+|++|++++..|..+..+++|+.|+|++|++++..+. ...+.++
T Consensus 146 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 225 (306)
T 2z66_A 146 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 225 (306)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTC
T ss_pred cccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccC
Confidence 5667777777777777775 4677777777777777777777766667777777777777777777766552 3445566
Q ss_pred cccccccccc
Q 044428 81 STESFSWNYA 90 (457)
Q Consensus 81 ~~~~~~~n~~ 90 (457)
..+.+++|..
T Consensus 226 ~~L~L~~N~l 235 (306)
T 2z66_A 226 QVLDYSLNHI 235 (306)
T ss_dssp CEEECTTSCC
T ss_pred CEeECCCCCC
Confidence 6667766643
No 304
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.93 E-value=1.1e-09 Score=97.45 Aligned_cols=86 Identities=22% Similarity=0.242 Sum_probs=75.7
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
.+++|++|+.|+|++|++++..|..++.+++|++|+|++|++.+.+| .+..+++|+.|++++|++++.. ....++++.
T Consensus 107 ~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~ 184 (197)
T 4ezg_A 107 NLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLN 184 (197)
T ss_dssp CCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCC
T ss_pred hhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCC
Confidence 57889999999999999998899999999999999999999333787 7999999999999999999854 556678888
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|+
T Consensus 185 ~L~l~~N~ 192 (197)
T 4ezg_A 185 QLYAFSQT 192 (197)
T ss_dssp EEEECBC-
T ss_pred EEEeeCcc
Confidence 89998885
No 305
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.93 E-value=2.2e-09 Score=100.49 Aligned_cols=88 Identities=24% Similarity=0.295 Sum_probs=67.7
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~ 80 (457)
.++++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+..+++|+.|++++|++++.+|.. ..+.++
T Consensus 80 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 159 (272)
T 3rfs_A 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNL 159 (272)
T ss_dssp GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccC
Confidence 4667888888888888888666666788888888888888888655556788888888888888888777653 456777
Q ss_pred ccccccccc
Q 044428 81 STESFSWNY 89 (457)
Q Consensus 81 ~~~~~~~n~ 89 (457)
..+.+++|.
T Consensus 160 ~~L~l~~n~ 168 (272)
T 3rfs_A 160 TELDLSYNQ 168 (272)
T ss_dssp CEEECCSSC
T ss_pred CEEECCCCC
Confidence 777777774
No 306
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.90 E-value=1.7e-09 Score=94.26 Aligned_cols=79 Identities=19% Similarity=0.249 Sum_probs=41.9
Q ss_pred cCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccc-hhcCCCceEecccccCCCCCC--CCCCcccccccc
Q 044428 8 DLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSL-EALLYLKQLNVSQNRLEGEIP--VEGPFRNFSTES 84 (457)
Q Consensus 8 ~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~-~~~~~L~~l~l~~n~l~~~~p--~~~~~~~~~~~~ 84 (457)
+|+.|+|++|+|++ + +.|+.+++|++|+|++|+|+ .+|+.+ ..+++|+.|++++|+++...+ ....++++..+.
T Consensus 43 ~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCc-c-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEE
Confidence 55566666666653 2 45555666666666666665 344333 555666666666666543322 223344455555
Q ss_pred ccccc
Q 044428 85 FSWNY 89 (457)
Q Consensus 85 ~~~n~ 89 (457)
+++|+
T Consensus 120 l~~N~ 124 (176)
T 1a9n_A 120 ILRNP 124 (176)
T ss_dssp CCSSG
T ss_pred ecCCC
Confidence 55554
No 307
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.89 E-value=2.1e-09 Score=111.37 Aligned_cols=91 Identities=27% Similarity=0.346 Sum_probs=61.4
Q ss_pred ccCCccCCeeeccCCccc-ccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccc
Q 044428 3 IGGLKDLATLSLAANKFH-GPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNF 80 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~-g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~ 80 (457)
++++++|+.|+|++|+++ |.+|..++.+++|+.|+|++|++++..|..+..+++|+.|++++|++++.+|. ...++++
T Consensus 441 ~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 520 (570)
T 2z63_A 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSL 520 (570)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred hhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCC
Confidence 455666777777777766 56677777777777777777777766666777777777777777777766654 2445666
Q ss_pred cccccccccccCC
Q 044428 81 STESFSWNYALCG 93 (457)
Q Consensus 81 ~~~~~~~n~~lcg 93 (457)
..+.+++|+..|.
T Consensus 521 ~~L~l~~N~~~~~ 533 (570)
T 2z63_A 521 QKIWLHTNPWDCS 533 (570)
T ss_dssp CEEECCSSCBCCC
T ss_pred cEEEecCCcccCC
Confidence 6677777766554
No 308
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.89 E-value=2.6e-09 Score=92.98 Aligned_cols=71 Identities=27% Similarity=0.386 Sum_probs=61.7
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccccCCCCCCC
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQNRLEGEIPV 73 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n~l~~~~p~ 73 (457)
.++++++|+.|+|++|+|++..|..|+++++|++|+|++|+|+ .+|. .+..+++|+.|+|++|++....+.
T Consensus 52 ~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 52 VFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK-SIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred HhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccc-eeCHHHhccccCCCEEEeCCCCccccccc
Confidence 4788999999999999999644445799999999999999999 5555 599999999999999999987653
No 309
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.88 E-value=4e-09 Score=91.87 Aligned_cols=85 Identities=20% Similarity=0.202 Sum_probs=72.9
Q ss_pred CccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCcccccccc
Q 044428 6 LKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFSTES 84 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~~~~ 84 (457)
.++|+.|+|++|++++..|..|+++++|++|+|++|+|++..|..+..+++|+.|++++|++++.++.. ..+.++..+.
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 468999999999999655567899999999999999999555556789999999999999999888753 5678888999
Q ss_pred cccccc
Q 044428 85 FSWNYA 90 (457)
Q Consensus 85 ~~~n~~ 90 (457)
+++|..
T Consensus 107 l~~N~l 112 (177)
T 2o6r_A 107 LDTNQL 112 (177)
T ss_dssp CCSSCC
T ss_pred CcCCcc
Confidence 998854
No 310
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.88 E-value=4.2e-09 Score=99.61 Aligned_cols=86 Identities=29% Similarity=0.286 Sum_probs=70.9
Q ss_pred cCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCcccccc
Q 044428 4 GGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFST 82 (457)
Q Consensus 4 ~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~~ 82 (457)
+.+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..+..+++|+.|+|++|++++.++.. ..+.++..
T Consensus 74 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 56888999999999998 88888889999999999999999555567888999999999999998876643 45667788
Q ss_pred cccccccc
Q 044428 83 ESFSWNYA 90 (457)
Q Consensus 83 ~~~~~n~~ 90 (457)
+.+++|..
T Consensus 153 L~L~~N~l 160 (290)
T 1p9a_G 153 LSLANNNL 160 (290)
T ss_dssp EECTTSCC
T ss_pred EECCCCcC
Confidence 88888753
No 311
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.87 E-value=2.3e-09 Score=104.77 Aligned_cols=86 Identities=23% Similarity=0.131 Sum_probs=66.8
Q ss_pred CCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccccc
Q 044428 5 GLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFSTE 83 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~ 83 (457)
++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|. ...+.++..+
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 788888888888888866667788888888888888888855555678888888888888888877653 3456677777
Q ss_pred ccccccc
Q 044428 84 SFSWNYA 90 (457)
Q Consensus 84 ~~~~n~~ 90 (457)
.+++|..
T Consensus 142 ~L~~N~l 148 (361)
T 2xot_A 142 YLSQNQI 148 (361)
T ss_dssp ECCSSCC
T ss_pred ECCCCcC
Confidence 7777753
No 312
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.87 E-value=2.4e-09 Score=112.18 Aligned_cols=88 Identities=17% Similarity=0.203 Sum_probs=66.4
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~ 80 (457)
+|++|++|+.|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|.++++|+.|+|++|++++.++. .+.+.++
T Consensus 71 ~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L 150 (635)
T 4g8a_A 71 SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL 150 (635)
T ss_dssp TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTC
T ss_pred HHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCccc
Confidence 467788888888888888855556788888888888888888843334677888888888888888877663 4566677
Q ss_pred ccccccccc
Q 044428 81 STESFSWNY 89 (457)
Q Consensus 81 ~~~~~~~n~ 89 (457)
..+.+++|.
T Consensus 151 ~~L~Ls~N~ 159 (635)
T 4g8a_A 151 KELNVAHNL 159 (635)
T ss_dssp CEEECCSSC
T ss_pred CeeccccCc
Confidence 777777775
No 313
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.87 E-value=9.2e-10 Score=95.98 Aligned_cols=85 Identities=22% Similarity=0.183 Sum_probs=71.0
Q ss_pred CccCCccCCeeeccCCcccccCCcc-cCCCCCCCeEeCcCCccCCCCCc--cchhcCCCceEecccccCCCCCCC----C
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKS-FGSLISLESLDLSSNNLSGEIPK--SLEALLYLKQLNVSQNRLEGEIPV----E 74 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~-~~~l~~l~~l~l~~n~l~g~~p~--~~~~~~~L~~l~l~~n~l~~~~p~----~ 74 (457)
.++++++|+.|+|++|+|+ .+|+. ++.+++|++|+|++|+|+ .+|. .+..+++|+.|++++|+++...+. .
T Consensus 59 ~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~ 136 (176)
T 1a9n_A 59 GFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVI 136 (176)
T ss_dssp CCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHH
T ss_pred ccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHH
Confidence 5788999999999999999 56655 499999999999999997 8887 899999999999999999865442 3
Q ss_pred CCcccccccccccc
Q 044428 75 GPFRNFSTESFSWN 88 (457)
Q Consensus 75 ~~~~~~~~~~~~~n 88 (457)
..++++..+.++.|
T Consensus 137 ~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 137 YKVPQVRVLDFQKV 150 (176)
T ss_dssp HHCTTCSEETTEEC
T ss_pred HHCCccceeCCCcC
Confidence 45566666666665
No 314
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.85 E-value=2.2e-09 Score=111.03 Aligned_cols=71 Identities=24% Similarity=0.279 Sum_probs=66.4
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCC-CccchhcCCCceEecccccCCCCCCCC
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEI-PKSLEALLYLKQLNVSQNRLEGEIPVE 74 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~-p~~~~~~~~L~~l~l~~n~l~~~~p~~ 74 (457)
++++|++|+.|+|++|+|++ +| .|++|++|+.|+|++|+|++.+ |..+..+++|+.|+|++|+|++.+|..
T Consensus 481 ~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 481 ALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp GGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred hhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 57889999999999999996 88 8999999999999999999776 999999999999999999999998854
No 315
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.85 E-value=2.5e-09 Score=102.06 Aligned_cols=83 Identities=23% Similarity=0.165 Sum_probs=46.0
Q ss_pred cCCccCCeeeccCCcccccCCc----ccCCCCCCCeEeCcCCccCCCCCccchhc---CCCceEecccccCCCCCCCCCC
Q 044428 4 GGLKDLATLSLAANKFHGPIPK----SFGSLISLESLDLSSNNLSGEIPKSLEAL---LYLKQLNVSQNRLEGEIPVEGP 76 (457)
Q Consensus 4 ~~l~~L~~l~l~~N~l~g~~p~----~~~~l~~l~~l~l~~n~l~g~~p~~~~~~---~~L~~l~l~~n~l~~~~p~~~~ 76 (457)
+++++|+.|+|++|+|+ .+|. .++++++|++|+|++|+|++.+|..+..+ ++|+.|+|++|+|+.. |...
T Consensus 194 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~l-p~~~- 270 (310)
T 4glp_A 194 HKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQV-PKGL- 270 (310)
T ss_dssp TSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSC-CSCC-
T ss_pred hcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCch-hhhh-
Confidence 45666666666666665 3332 13555666666666666665556555554 4666666666666633 3221
Q ss_pred ccccccccccccc
Q 044428 77 FRNFSTESFSWNY 89 (457)
Q Consensus 77 ~~~~~~~~~~~n~ 89 (457)
++++..+.+++|.
T Consensus 271 ~~~L~~L~Ls~N~ 283 (310)
T 4glp_A 271 PAKLRVLDLSSNR 283 (310)
T ss_dssp CSCCSCEECCSCC
T ss_pred cCCCCEEECCCCc
Confidence 2455555565553
No 316
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.84 E-value=1.4e-09 Score=113.61 Aligned_cols=89 Identities=24% Similarity=0.240 Sum_probs=56.1
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~ 81 (457)
++++++|+.|+|++|++++..|..|+++++|+.|+|++|++++..|..+.+++.| .|++++|++++.+|.. ..+.++.
T Consensus 472 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~ 550 (606)
T 3t6q_A 472 LQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQR 550 (606)
T ss_dssp GGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSS
T ss_pred hccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCC
Confidence 4455666666666666665556666666666666666666666666666666666 6666666666665542 3345566
Q ss_pred ccccccccccC
Q 044428 82 TESFSWNYALC 92 (457)
Q Consensus 82 ~~~~~~n~~lc 92 (457)
.+.+++|+..|
T Consensus 551 ~L~l~~N~~~c 561 (606)
T 3t6q_A 551 TINLRQNPLDC 561 (606)
T ss_dssp EEECTTCCEEC
T ss_pred EEeCCCCCccc
Confidence 66677776655
No 317
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.83 E-value=4.1e-09 Score=100.29 Aligned_cols=89 Identities=24% Similarity=0.288 Sum_probs=68.4
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCC-CCCccchhcCCCceEecccccCCCCCCC-CCCccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSG-EIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g-~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~ 79 (457)
.++++++|+.|+|++|++++..|..|+++++|++|+|++|++++ .+|..+..+++|+.|++++|++++..|. ...+++
T Consensus 121 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 200 (306)
T 2z66_A 121 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 200 (306)
T ss_dssp TTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCC
Confidence 35677888888888888887777778888888888888888876 5777888888888888888888877653 345567
Q ss_pred ccccccccccc
Q 044428 80 FSTESFSWNYA 90 (457)
Q Consensus 80 ~~~~~~~~n~~ 90 (457)
+..+.+++|..
T Consensus 201 L~~L~L~~N~l 211 (306)
T 2z66_A 201 LQVLNMSHNNF 211 (306)
T ss_dssp CCEEECTTSCC
T ss_pred CCEEECCCCcc
Confidence 77777777753
No 318
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.83 E-value=3.7e-09 Score=101.04 Aligned_cols=84 Identities=24% Similarity=0.197 Sum_probs=76.1
Q ss_pred CCccCCeeeccCCcccccCCccc--CCCCCCCeEeCcCCccCCCCCccchhc-----CCCceEecccccCCCCCC-CCCC
Q 044428 5 GLKDLATLSLAANKFHGPIPKSF--GSLISLESLDLSSNNLSGEIPKSLEAL-----LYLKQLNVSQNRLEGEIP-VEGP 76 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~g~~p~~~--~~l~~l~~l~l~~n~l~g~~p~~~~~~-----~~L~~l~l~~n~l~~~~p-~~~~ 76 (457)
++++|+.|+|++|+++|.+|..+ +.+++|++|+|++|++++. |..+..+ ++|+.|+|++|++++.+| ..+.
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 68999999999999999999987 9999999999999999966 9989888 899999999999999886 3467
Q ss_pred ccccccccccccc
Q 044428 77 FRNFSTESFSWNY 89 (457)
Q Consensus 77 ~~~~~~~~~~~n~ 89 (457)
+.++..+.+++|.
T Consensus 172 l~~L~~L~Ls~N~ 184 (312)
T 1wwl_A 172 FPALSTLDLSDNP 184 (312)
T ss_dssp CSSCCEEECCSCT
T ss_pred CCCCCEEECCCCC
Confidence 7888899999885
No 319
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.82 E-value=1.5e-09 Score=114.20 Aligned_cols=88 Identities=18% Similarity=0.321 Sum_probs=78.1
Q ss_pred Ccc--CCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCc-cCC-CCCccchhc------CCCceEecccccCCCCC
Q 044428 2 TIG--GLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNN-LSG-EIPKSLEAL------LYLKQLNVSQNRLEGEI 71 (457)
Q Consensus 2 ~~~--~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~-l~g-~~p~~~~~~------~~L~~l~l~~n~l~~~~ 71 (457)
+++ +|++|+.|+|++|+++|.+|.+|+++++|++|+|++|+ ++| .+|..++++ ++|+.|++++|+++ .+
T Consensus 242 ~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~i 320 (636)
T 4eco_A 242 DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TF 320 (636)
T ss_dssp CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SC
T ss_pred hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-cc
Confidence 456 89999999999999999999999999999999999998 999 899999887 89999999999999 55
Q ss_pred CC---CCCcccccccccccccc
Q 044428 72 PV---EGPFRNFSTESFSWNYA 90 (457)
Q Consensus 72 p~---~~~~~~~~~~~~~~n~~ 90 (457)
|. .+.+.++..+.+++|..
T Consensus 321 p~~~~l~~l~~L~~L~L~~N~l 342 (636)
T 4eco_A 321 PVETSLQKMKKLGMLECLYNQL 342 (636)
T ss_dssp CCHHHHTTCTTCCEEECCSCCC
T ss_pred CchhhhccCCCCCEEeCcCCcC
Confidence 54 57778888888888754
No 320
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.82 E-value=5.4e-09 Score=109.97 Aligned_cols=84 Identities=24% Similarity=0.226 Sum_probs=51.4
Q ss_pred CCccCCeeeccCCcccccCCcccC--CCCCCCeEeCcCCccCCCCCccchhcCCCceEec------ccccCCCCCCC-CC
Q 044428 5 GLKDLATLSLAANKFHGPIPKSFG--SLISLESLDLSSNNLSGEIPKSLEALLYLKQLNV------SQNRLEGEIPV-EG 75 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~g~~p~~~~--~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l------~~n~l~~~~p~-~~ 75 (457)
+|++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|+.|+| ++|++.+.+|. ..
T Consensus 486 ~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~ 563 (636)
T 4eco_A 486 NTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGIT 563 (636)
T ss_dssp TGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGG
T ss_pred ccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHh
Confidence 3446666666666666 5666665 66666666666666664 6666666666666666 34555665553 23
Q ss_pred Ccccccccccccccc
Q 044428 76 PFRNFSTESFSWNYA 90 (457)
Q Consensus 76 ~~~~~~~~~~~~n~~ 90 (457)
.++++..+.+++|..
T Consensus 564 ~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 564 LCPSLTQLQIGSNDI 578 (636)
T ss_dssp GCSSCCEEECCSSCC
T ss_pred cCCCCCEEECCCCcC
Confidence 445556666666543
No 321
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.82 E-value=3.9e-09 Score=107.04 Aligned_cols=91 Identities=25% Similarity=0.254 Sum_probs=76.7
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~ 81 (457)
++++++|+.|+|++|++++..+..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+.. ..+.++.
T Consensus 244 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 323 (477)
T 2id5_A 244 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLE 323 (477)
T ss_dssp HTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCC
T ss_pred hcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccC
Confidence 567888999999999998777778889999999999999999888888999999999999999998877643 4567788
Q ss_pred ccccccccccCC
Q 044428 82 TESFSWNYALCG 93 (457)
Q Consensus 82 ~~~~~~n~~lcg 93 (457)
.+.+++|+..|.
T Consensus 324 ~L~l~~N~l~c~ 335 (477)
T 2id5_A 324 TLILDSNPLACD 335 (477)
T ss_dssp EEECCSSCEECS
T ss_pred EEEccCCCccCc
Confidence 889999988764
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.81 E-value=6.6e-09 Score=97.33 Aligned_cols=86 Identities=17% Similarity=0.195 Sum_probs=37.9
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCC-CCCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIP-VEGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p-~~~~~~~~~ 81 (457)
++++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++|+.|++++|++++..+ ....+.++.
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 127 (276)
T 2z62_A 48 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 127 (276)
T ss_dssp TTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCC
T ss_pred hccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCC
Confidence 3344444444444444443333344444444444444444443333444444444444444444444333 123333444
Q ss_pred ccccccc
Q 044428 82 TESFSWN 88 (457)
Q Consensus 82 ~~~~~~n 88 (457)
.+.+++|
T Consensus 128 ~L~l~~n 134 (276)
T 2z62_A 128 ELNVAHN 134 (276)
T ss_dssp EEECCSS
T ss_pred EEECcCC
Confidence 4444444
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.81 E-value=1.1e-08 Score=95.68 Aligned_cols=87 Identities=24% Similarity=0.271 Sum_probs=67.5
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~ 81 (457)
++++++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|+.|+|++|++++.++. ...+.++.
T Consensus 81 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 160 (270)
T 2o6q_A 81 FKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLK 160 (270)
T ss_dssp TSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccc
Confidence 46788888888888888854455678888888888888888866666778888888888888888877664 35566777
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 161 ~L~L~~n~ 168 (270)
T 2o6q_A 161 ELRLYNNQ 168 (270)
T ss_dssp EEECCSSC
T ss_pred eeEecCCc
Confidence 77777774
No 324
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.81 E-value=3.1e-09 Score=106.97 Aligned_cols=88 Identities=23% Similarity=0.238 Sum_probs=55.4
Q ss_pred CccCCccCCeeeccCCcccccCC-cccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC---CCCc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIP-KSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV---EGPF 77 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p-~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~---~~~~ 77 (457)
.+++|++|+.|+|++|.+++.+| ..|+++++|++|+|++|++++..|..+.++++|+.|+|++|++++.+|. ...+
T Consensus 49 ~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l 128 (455)
T 3v47_A 49 SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPL 128 (455)
T ss_dssp TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTC
T ss_pred HhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCc
Confidence 35666677777777777665554 4566677777777777777665666666666777777777766664433 2334
Q ss_pred cccccccccccc
Q 044428 78 RNFSTESFSWNY 89 (457)
Q Consensus 78 ~~~~~~~~~~n~ 89 (457)
.++..+.+++|.
T Consensus 129 ~~L~~L~L~~n~ 140 (455)
T 3v47_A 129 TSLEMLVLRDNN 140 (455)
T ss_dssp TTCCEEECCSSB
T ss_pred ccCCEEECCCCc
Confidence 555555666554
No 325
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.80 E-value=2.4e-09 Score=115.80 Aligned_cols=89 Identities=19% Similarity=0.234 Sum_probs=72.1
Q ss_pred CccCCccCCeeeccCCcccc-----------------cCCcccC--CCCCCCeEeCcCCccCCCCCccchhcCCCceEec
Q 044428 2 TIGGLKDLATLSLAANKFHG-----------------PIPKSFG--SLISLESLDLSSNNLSGEIPKSLEALLYLKQLNV 62 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g-----------------~~p~~~~--~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l 62 (457)
+|++|++|+.|+|++|+|+| .+|++++ +|++|++|+|++|++.|.+|..+.++++|+.|+|
T Consensus 443 ~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~L 522 (876)
T 4ecn_A 443 AIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNI 522 (876)
T ss_dssp GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEEC
T ss_pred HHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEEC
Confidence 47788999999999999998 4899888 9999999999999999999999999999999999
Q ss_pred cccc-CCC-CCCCC-C-------Ccccccccccccccc
Q 044428 63 SQNR-LEG-EIPVE-G-------PFRNFSTESFSWNYA 90 (457)
Q Consensus 63 ~~n~-l~~-~~p~~-~-------~~~~~~~~~~~~n~~ 90 (457)
++|+ ++| .+|.. + .++++..+.+++|..
T Consensus 523 s~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 523 ACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred cCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 9998 888 66631 2 223667777777653
No 326
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.80 E-value=1.1e-08 Score=96.22 Aligned_cols=89 Identities=24% Similarity=0.207 Sum_probs=73.2
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCc-cCCCCCccchhcCCCceEecccccCCCCCCCC-CCccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNN-LSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~-l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~ 79 (457)
.++++++|+.|+|++|++++..|..|+++++|++|+|++|+ +++..|..+..+++|+.|++++|++++..|.. ..+.+
T Consensus 51 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 130 (285)
T 1ozn_A 51 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAA 130 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTT
T ss_pred HcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcC
Confidence 46788999999999999997778889999999999999997 77555778888999999999999998876643 45677
Q ss_pred ccccccccccc
Q 044428 80 FSTESFSWNYA 90 (457)
Q Consensus 80 ~~~~~~~~n~~ 90 (457)
+..+.+++|..
T Consensus 131 L~~L~l~~n~l 141 (285)
T 1ozn_A 131 LQYLYLQDNAL 141 (285)
T ss_dssp CCEEECCSSCC
T ss_pred CCEEECCCCcc
Confidence 78888887753
No 327
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.79 E-value=6e-09 Score=101.76 Aligned_cols=82 Identities=22% Similarity=0.122 Sum_probs=57.4
Q ss_pred cCCeeeccCCcccccCCcccC-CCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccccccc
Q 044428 8 DLATLSLAANKFHGPIPKSFG-SLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFSTESF 85 (457)
Q Consensus 8 ~L~~l~l~~N~l~g~~p~~~~-~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~~~ 85 (457)
.|+.|+|++|+|++..+..|. ++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+. ...+.++..+.+
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 467777777777755555565 777777777777777755555677777777777777777766553 345566677777
Q ss_pred cccc
Q 044428 86 SWNY 89 (457)
Q Consensus 86 ~~n~ 89 (457)
++|.
T Consensus 120 ~~N~ 123 (361)
T 2xot_A 120 YNNH 123 (361)
T ss_dssp CSSC
T ss_pred CCCc
Confidence 7764
No 328
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.79 E-value=9e-09 Score=106.64 Aligned_cols=90 Identities=27% Similarity=0.268 Sum_probs=49.6
Q ss_pred ccCCccCCeeeccCCcccccCCcc-cCCCCCCCeEeCcCCccCC---------------------CCCccchhcCCCceE
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKS-FGSLISLESLDLSSNNLSG---------------------EIPKSLEALLYLKQL 60 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~-~~~l~~l~~l~l~~n~l~g---------------------~~p~~~~~~~~L~~l 60 (457)
++++++|+.|+|++|++++.+|.. +..+++|+.|+|++|+++| .||..+..+++|+.|
T Consensus 399 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L 478 (562)
T 3a79_B 399 TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQEL 478 (562)
T ss_dssp TTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEE
T ss_pred hcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEE
Confidence 566777777777777777656653 5555555555555555544 455544455555555
Q ss_pred ecccccCCCCCCC-CCCcccccccccccccccC
Q 044428 61 NVSQNRLEGEIPV-EGPFRNFSTESFSWNYALC 92 (457)
Q Consensus 61 ~l~~n~l~~~~p~-~~~~~~~~~~~~~~n~~lc 92 (457)
+|++|+++..++. ...++++..+.+++|++.|
T Consensus 479 ~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 479 NVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp ECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred ECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCC
Confidence 5555555543332 3334445555555555444
No 329
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.79 E-value=4.7e-09 Score=100.34 Aligned_cols=84 Identities=25% Similarity=0.274 Sum_probs=49.4
Q ss_pred cCCccCCeeeccCCcccc--cCCc-ccCCCCCCCeEeCcCCccCCCCC-ccchhcCCCceEecccccCCCCCCCCCCccc
Q 044428 4 GGLKDLATLSLAANKFHG--PIPK-SFGSLISLESLDLSSNNLSGEIP-KSLEALLYLKQLNVSQNRLEGEIPVEGPFRN 79 (457)
Q Consensus 4 ~~l~~L~~l~l~~N~l~g--~~p~-~~~~l~~l~~l~l~~n~l~g~~p-~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~ 79 (457)
+++++|+.|+|++|+|++ .+|. .+.++++|++|+|++|++++.+| ..+..+++|+.|+|++|+++ .+|.... .+
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~ 275 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AK 275 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SE
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CC
Confidence 566677777777777762 2332 23456677777777777766554 34445666777777777766 3343222 45
Q ss_pred cccccccccc
Q 044428 80 FSTESFSWNY 89 (457)
Q Consensus 80 ~~~~~~~~n~ 89 (457)
+..+.+++|.
T Consensus 276 L~~L~Ls~N~ 285 (312)
T 1wwl_A 276 LSVLDLSYNR 285 (312)
T ss_dssp EEEEECCSSC
T ss_pred ceEEECCCCC
Confidence 6666666664
No 330
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.79 E-value=3.4e-09 Score=107.78 Aligned_cols=86 Identities=22% Similarity=0.099 Sum_probs=63.3
Q ss_pred CccCCccCCeeeccCCcccccCCcccC-CCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFG-SLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~-~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~ 80 (457)
.++++++|+.|+|++|+|+|.+|..+. ++++|+.|+|++|+|++. |. +..+++|+.|+|++|+|++.+|....++++
T Consensus 139 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L 216 (487)
T 3oja_A 139 DEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGV 216 (487)
T ss_dssp CGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTC
T ss_pred hhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCc
Confidence 456788888888888888887887775 678888888888887744 32 334777777777777777776666666667
Q ss_pred ccccccccc
Q 044428 81 STESFSWNY 89 (457)
Q Consensus 81 ~~~~~~~n~ 89 (457)
..+.+++|.
T Consensus 217 ~~L~Ls~N~ 225 (487)
T 3oja_A 217 TWISLRNNK 225 (487)
T ss_dssp SEEECTTSC
T ss_pred cEEEecCCc
Confidence 777777764
No 331
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.79 E-value=9.4e-09 Score=98.92 Aligned_cols=83 Identities=24% Similarity=0.180 Sum_probs=42.8
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFSTESFS 86 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~~~~~ 86 (457)
++|+.|+|++|++++..|..|+.+++|+.|+|++|++++..|..+..+++|+.|+|++|+++..++....++++..+.++
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~ 271 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLH 271 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECC
Confidence 44555555555555444555555555555555555555444445555555555555555555333333344444555555
Q ss_pred ccc
Q 044428 87 WNY 89 (457)
Q Consensus 87 ~n~ 89 (457)
+|.
T Consensus 272 ~N~ 274 (330)
T 1xku_A 272 NNN 274 (330)
T ss_dssp SSC
T ss_pred CCc
Confidence 443
No 332
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.78 E-value=4.7e-08 Score=93.72 Aligned_cols=137 Identities=17% Similarity=0.216 Sum_probs=101.3
Q ss_pred cCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCC---C-ccceeeeeeecCCeeEEEEe
Q 044428 174 EFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRH---R-NLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 174 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h---~-niv~l~~~~~~~~~~~lv~e 249 (457)
.....+.++.|....||+. |..+++|+..... ....+.+|.+++..+.+ + .+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5566678999999999998 6778999875332 23457899999988866 1 23344444 56789999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 044428 250 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHA-------------------------------------- 291 (457)
Q Consensus 250 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-------------------------------------- 291 (457)
|++|.++.+.... .++..++..++.+++..+..||....
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999988743321 25666777788888888888884321
Q ss_pred ---------------------CCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 292 ---------------------LAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 292 ---------------------~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
...++|+|++|.||+++++..+.|.||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12359999999999999976779999998865
No 333
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.78 E-value=8e-09 Score=100.43 Aligned_cols=81 Identities=21% Similarity=0.226 Sum_probs=36.9
Q ss_pred cCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccccccccc
Q 044428 8 DLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFSTESFS 86 (457)
Q Consensus 8 ~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~~~~ 86 (457)
+|+.|+|++|++++..+..|+++++|++|+|++|++++..|..+.++++|+.|++++|++++..+. ...+.++..+.++
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 444555555555432223444455555555555555433344444444555555555554443332 2333444444444
Q ss_pred cc
Q 044428 87 WN 88 (457)
Q Consensus 87 ~n 88 (457)
+|
T Consensus 133 ~n 134 (353)
T 2z80_A 133 GN 134 (353)
T ss_dssp TC
T ss_pred CC
Confidence 44
No 334
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.77 E-value=1.1e-08 Score=98.45 Aligned_cols=67 Identities=25% Similarity=0.299 Sum_probs=33.8
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCC
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGE 70 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~ 70 (457)
++++++|+.|+|++|++++..|..++.+++|+.|+|++|+|+ .+|..+..+++|+.|++++|++++.
T Consensus 213 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 213 LLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp STTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBC
T ss_pred hcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCcc
Confidence 344455555555555555433444555555555555555555 4555555555555555555555443
No 335
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.77 E-value=9e-09 Score=109.74 Aligned_cols=88 Identities=23% Similarity=0.182 Sum_probs=77.4
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
.+..+++|+.|+|++|+|+ .+|..+.+|++|++|+|++|+|+ .||..+.++++|+.|+|++|+|+..++..+.+.++.
T Consensus 219 ~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~ 296 (727)
T 4b8c_D 219 SKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLK 296 (727)
T ss_dssp ---CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCS
T ss_pred hhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCC
Confidence 3677899999999999999 89999999999999999999999 999999999999999999999995544557778899
Q ss_pred cccccccccc
Q 044428 82 TESFSWNYAL 91 (457)
Q Consensus 82 ~~~~~~n~~l 91 (457)
.+.+++|...
T Consensus 297 ~L~L~~N~l~ 306 (727)
T 4b8c_D 297 YFYFFDNMVT 306 (727)
T ss_dssp EEECCSSCCC
T ss_pred EEECCCCCCC
Confidence 9999998643
No 336
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.77 E-value=2.4e-09 Score=115.79 Aligned_cols=86 Identities=22% Similarity=0.275 Sum_probs=77.0
Q ss_pred CCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCc-cCC-CCCccchhcC-------CCceEecccccCCCCCCC--
Q 044428 5 GLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNN-LSG-EIPKSLEALL-------YLKQLNVSQNRLEGEIPV-- 73 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~-l~g-~~p~~~~~~~-------~L~~l~l~~n~l~~~~p~-- 73 (457)
+|++|+.|+|++|+++|.+|..|++|++|+.|+|++|+ |+| .+|..+++++ +|+.|+|++|+++ .+|.
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~ 567 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASA 567 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHH
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChh
Confidence 89999999999999999999999999999999999998 999 8999888876 9999999999999 6665
Q ss_pred -CCCccccccccccccccc
Q 044428 74 -EGPFRNFSTESFSWNYAL 91 (457)
Q Consensus 74 -~~~~~~~~~~~~~~n~~l 91 (457)
.+.+.++..+.+++|...
T Consensus 568 ~l~~L~~L~~L~Ls~N~l~ 586 (876)
T 4ecn_A 568 SLQKMVKLGLLDCVHNKVR 586 (876)
T ss_dssp HHTTCTTCCEEECTTSCCC
T ss_pred hhhcCCCCCEEECCCCCcc
Confidence 577788888888888643
No 337
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.77 E-value=1.1e-08 Score=95.73 Aligned_cols=88 Identities=27% Similarity=0.288 Sum_probs=76.1
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCC-CC-CCCCccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGE-IP-VEGPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~-~p-~~~~~~~ 79 (457)
.++++++|+.|+|++|++++..|..|+++++|++|++++|++++..+..+..+++|+.|++++|++++. +| ....+.+
T Consensus 71 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~ 150 (276)
T 2z62_A 71 AYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTN 150 (276)
T ss_dssp TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTT
T ss_pred HccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCC
Confidence 478899999999999999987778999999999999999999966666899999999999999999873 35 3456678
Q ss_pred cccccccccc
Q 044428 80 FSTESFSWNY 89 (457)
Q Consensus 80 ~~~~~~~~n~ 89 (457)
+..+.+++|.
T Consensus 151 L~~L~Ls~N~ 160 (276)
T 2z62_A 151 LEHLDLSSNK 160 (276)
T ss_dssp CCEEECCSSC
T ss_pred CCEEECCCCC
Confidence 8888888874
No 338
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.76 E-value=1.3e-08 Score=104.19 Aligned_cols=89 Identities=25% Similarity=0.249 Sum_probs=48.1
Q ss_pred ccCCccCCeeeccCCcccccCCcc-cCCCC----------------------CCCeEeCcCCccCCCCCccchhcCCCce
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKS-FGSLI----------------------SLESLDLSSNNLSGEIPKSLEALLYLKQ 59 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~-~~~l~----------------------~l~~l~l~~n~l~g~~p~~~~~~~~L~~ 59 (457)
++++++|+.|+|++|++++.+|.. +..++ +|+.|+|++|+|+ .+|..+..+++|+.
T Consensus 370 ~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~ 448 (520)
T 2z7x_B 370 TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQE 448 (520)
T ss_dssp HTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCE
T ss_pred HhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCE
Confidence 445666666666666666545543 44444 4555555555555 55555555555666
Q ss_pred EecccccCCCCCCC-CCCcccccccccccccccC
Q 044428 60 LNVSQNRLEGEIPV-EGPFRNFSTESFSWNYALC 92 (457)
Q Consensus 60 l~l~~n~l~~~~p~-~~~~~~~~~~~~~~n~~lc 92 (457)
|+|++|+++..++. ...+.++..+.+++|+..|
T Consensus 449 L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 449 LNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred EECCCCcCCccCHHHhccCCcccEEECcCCCCcc
Confidence 66666666543332 3334455555555655544
No 339
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.76 E-value=1.2e-08 Score=106.51 Aligned_cols=88 Identities=19% Similarity=0.252 Sum_probs=62.7
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCC-CCCCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIP-VEGPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p-~~~~~~~~ 80 (457)
+++++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++|++|+|++|++++..| ..+.+.++
T Consensus 51 ~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 130 (606)
T 3vq2_A 51 SFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITL 130 (606)
T ss_dssp TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTC
T ss_pred hccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCC
Confidence 46677777777777777776666777777777777777777776667777777777777777777776653 23455566
Q ss_pred ccccccccc
Q 044428 81 STESFSWNY 89 (457)
Q Consensus 81 ~~~~~~~n~ 89 (457)
..+.+++|.
T Consensus 131 ~~L~L~~n~ 139 (606)
T 3vq2_A 131 KKLNVAHNF 139 (606)
T ss_dssp CEEECCSSC
T ss_pred CEEeCCCCc
Confidence 666666664
No 340
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.75 E-value=7.8e-09 Score=106.60 Aligned_cols=88 Identities=27% Similarity=0.217 Sum_probs=62.3
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCC--CCCCCCccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGE--IPVEGPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~--~p~~~~~~~ 79 (457)
+++++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++++++|+.|++++|++++. ++..+.+.+
T Consensus 45 ~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 124 (549)
T 2z81_A 45 DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTN 124 (549)
T ss_dssp TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTT
T ss_pred hhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCC
Confidence 466777777777777777766667777777788888888877755555577777778888887777752 234455666
Q ss_pred cccccccccc
Q 044428 80 FSTESFSWNY 89 (457)
Q Consensus 80 ~~~~~~~~n~ 89 (457)
+..+.+++|.
T Consensus 125 L~~L~L~~n~ 134 (549)
T 2z81_A 125 LQTLRIGNVE 134 (549)
T ss_dssp CCEEEEEESS
T ss_pred ccEEECCCCc
Confidence 6667776664
No 341
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.75 E-value=9.6e-09 Score=111.69 Aligned_cols=87 Identities=26% Similarity=0.317 Sum_probs=59.1
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCcc--chhcCCCceEecccccCCCCCCC--CCCc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKS--LEALLYLKQLNVSQNRLEGEIPV--EGPF 77 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~--~~~~~~L~~l~l~~n~l~~~~p~--~~~~ 77 (457)
+|++|++|+.|+|++|+|++..|..|++|++|++|+|++|++++.+|.. +.++++|+.|+|++|++++..|. .+.+
T Consensus 68 ~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L 147 (844)
T 3j0a_A 68 AFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKL 147 (844)
T ss_dssp TTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTC
T ss_pred HhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhC
Confidence 3566777777777777777666777777777777777777777666654 67777777777777777665442 3455
Q ss_pred ccccccccccc
Q 044428 78 RNFSTESFSWN 88 (457)
Q Consensus 78 ~~~~~~~~~~n 88 (457)
+++..+.+++|
T Consensus 148 ~~L~~L~Ls~N 158 (844)
T 3j0a_A 148 NSLKSIDFSSN 158 (844)
T ss_dssp SSCCEEEEESS
T ss_pred CCCCEEECCCC
Confidence 55666666555
No 342
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.75 E-value=1.5e-08 Score=105.83 Aligned_cols=86 Identities=16% Similarity=0.120 Sum_probs=55.4
Q ss_pred cCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCcccccc
Q 044428 4 GGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFST 82 (457)
Q Consensus 4 ~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~~ 82 (457)
+++++|+.|+|++|+|++..|..|+++++|++|+|++|.|++..|..++++++|+.|+|++|.+++.++.. +.+.++..
T Consensus 72 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~ 151 (597)
T 3oja_B 72 DSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTT 151 (597)
T ss_dssp HHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCE
Confidence 44666777777777776555556666777777777777776555555666667777777777666655543 45556666
Q ss_pred ccccccc
Q 044428 83 ESFSWNY 89 (457)
Q Consensus 83 ~~~~~n~ 89 (457)
+.+++|.
T Consensus 152 L~Ls~N~ 158 (597)
T 3oja_B 152 LSMSNNN 158 (597)
T ss_dssp EECCSSC
T ss_pred EEeeCCc
Confidence 6666654
No 343
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.72 E-value=1.6e-08 Score=101.85 Aligned_cols=83 Identities=19% Similarity=0.114 Sum_probs=54.3
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFSTESF 85 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~~~ 85 (457)
++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..|..+.++++|+.|+|++|++++.++. ...+.++..+.+
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 3566777777777766666677777777777777777755556666677777777777777665553 334556666666
Q ss_pred cccc
Q 044428 86 SWNY 89 (457)
Q Consensus 86 ~~n~ 89 (457)
++|.
T Consensus 155 ~~N~ 158 (452)
T 3zyi_A 155 RNNP 158 (452)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 6664
No 344
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.72 E-value=2.3e-08 Score=98.47 Aligned_cols=87 Identities=16% Similarity=0.130 Sum_probs=59.4
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-CCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-GPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~~~~~~~ 81 (457)
++++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++|+.|+|++|+++..++.. ..+.++.
T Consensus 65 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 65 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 144 (390)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc
Confidence 345677777777777777555557777777777777777777655666777777777777777777555442 4556666
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 145 ~L~L~~n~ 152 (390)
T 3o6n_A 145 TLSMSNNN 152 (390)
T ss_dssp EEECCSSC
T ss_pred EEECCCCc
Confidence 67776664
No 345
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.71 E-value=1.3e-08 Score=106.23 Aligned_cols=87 Identities=22% Similarity=0.205 Sum_probs=74.3
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCcc-chhcCCCceEecccccCCCCCCC-CCCccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKS-LEALLYLKQLNVSQNRLEGEIPV-EGPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~-~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~ 79 (457)
.|+++++|+.|+|++|.|++..|..|+++++|++|+|++|+|+ .+|.. +.++++|+.|+|++|.+++.+|. ...+.+
T Consensus 94 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 172 (597)
T 3oja_B 94 AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 172 (597)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTT
T ss_pred HhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCc
Confidence 5788999999999999999877778899999999999999999 56655 68899999999999999988874 466778
Q ss_pred cccccccccc
Q 044428 80 FSTESFSWNY 89 (457)
Q Consensus 80 ~~~~~~~~n~ 89 (457)
+..+.+++|.
T Consensus 173 L~~L~L~~N~ 182 (597)
T 3oja_B 173 LQNLQLSSNR 182 (597)
T ss_dssp CCEEECTTSC
T ss_pred CcEEECcCCC
Confidence 8888888875
No 346
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.71 E-value=1.5e-08 Score=105.82 Aligned_cols=89 Identities=20% Similarity=0.098 Sum_probs=66.1
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~ 80 (457)
+|+++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++|+.|++++|++++..|. ...+.++
T Consensus 52 ~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L 131 (606)
T 3t6q_A 52 TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTL 131 (606)
T ss_dssp TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTC
T ss_pred HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcc
Confidence 467778888888888888877777788888888888888888877777788888888888888888775332 3455666
Q ss_pred cccccccccc
Q 044428 81 STESFSWNYA 90 (457)
Q Consensus 81 ~~~~~~~n~~ 90 (457)
..+.+++|..
T Consensus 132 ~~L~L~~n~l 141 (606)
T 3t6q_A 132 ESLYLGSNHI 141 (606)
T ss_dssp CEEECCSSCC
T ss_pred cEEECCCCcc
Confidence 6777776643
No 347
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.70 E-value=1.5e-08 Score=98.12 Aligned_cols=69 Identities=26% Similarity=0.293 Sum_probs=60.3
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCC
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEI 71 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~ 71 (457)
.|++|++|+.|+|++|+|+|..|..|++|++|+.|+|++|+|+ .+|..+.....|+.|+|++|.|...-
T Consensus 51 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 51 DLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp GSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred HhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccc-eeCHHHcccCCceEEEeeCCCccCCC
Confidence 4789999999999999999988889999999999999999999 56665544444999999999998653
No 348
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.69 E-value=2.5e-08 Score=96.07 Aligned_cols=81 Identities=25% Similarity=0.196 Sum_probs=53.9
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFSTESFS 86 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~~~~~ 86 (457)
++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++|+.|++++|+++..++.. +.++..+.++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~--~~~L~~L~l~ 131 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNL--PSSLVELRIH 131 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSC--CTTCCEEECC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCccc--cccCCEEECC
Confidence 46777777777777555566777777777777777777655667777777777777777776433322 2556666666
Q ss_pred ccc
Q 044428 87 WNY 89 (457)
Q Consensus 87 ~n~ 89 (457)
+|.
T Consensus 132 ~n~ 134 (332)
T 2ft3_A 132 DNR 134 (332)
T ss_dssp SSC
T ss_pred CCc
Confidence 654
No 349
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.69 E-value=1.1e-08 Score=93.54 Aligned_cols=67 Identities=19% Similarity=0.291 Sum_probs=32.2
Q ss_pred ccCCccCCeeeccCCc-ccccCCcccCCCCCCCeEeCcC-CccCCCCCccchhcCCCceEecccccCCC
Q 044428 3 IGGLKDLATLSLAANK-FHGPIPKSFGSLISLESLDLSS-NNLSGEIPKSLEALLYLKQLNVSQNRLEG 69 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~-l~g~~p~~~~~l~~l~~l~l~~-n~l~g~~p~~~~~~~~L~~l~l~~n~l~~ 69 (457)
++++++|+.|+|++|+ +++..|..|+++++|++|+|++ |++++..|..+.++++|+.|++++|++++
T Consensus 51 ~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~ 119 (239)
T 2xwt_C 51 FSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM 119 (239)
T ss_dssp TTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS
T ss_pred ccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc
Confidence 4445555555555554 4422223455555555555554 55552222344455555555555555554
No 350
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.68 E-value=2.2e-08 Score=101.41 Aligned_cols=86 Identities=26% Similarity=0.335 Sum_probs=51.5
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccccCCCCCCC-CCCccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQNRLEGEIPV-EGPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~ 79 (457)
.|+++++|+.|+|++|++++..|..|+++++|++|+|++|+++ .+|. .+.++++|+.|+|++|++++.+|. ...+.+
T Consensus 51 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 129 (477)
T 2id5_A 51 EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYN 129 (477)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-ccCcccccCCCCCCEEECCCCccccCChhHcccccc
Confidence 3555666666666666666555666666666666666666666 3333 456666666666666666655542 233445
Q ss_pred ccccccccc
Q 044428 80 FSTESFSWN 88 (457)
Q Consensus 80 ~~~~~~~~n 88 (457)
+..+.+++|
T Consensus 130 L~~L~l~~n 138 (477)
T 2id5_A 130 LKSLEVGDN 138 (477)
T ss_dssp CCEEEECCT
T ss_pred CCEEECCCC
Confidence 555555555
No 351
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.68 E-value=1.4e-08 Score=107.55 Aligned_cols=92 Identities=30% Similarity=0.436 Sum_probs=67.6
Q ss_pred ccCCccCCeeeccCCcccccCCc-ccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCC-C-Cccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPK-SFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVE-G-PFRN 79 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~-~-~~~~ 79 (457)
++++++|+.|+|++|+|+ .+|. .|+++++|+.|+|++|+|++..|..+..+++|+.|+|++|++++.+|.. . .+++
T Consensus 532 ~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 610 (680)
T 1ziw_A 532 LKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRN 610 (680)
T ss_dssp TTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTT
T ss_pred hcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccc
Confidence 566777777788888777 5664 4778888888888888888433334567788888888888888776643 2 4567
Q ss_pred ccccccccccccCCCC
Q 044428 80 FSTESFSWNYALCGPS 95 (457)
Q Consensus 80 ~~~~~~~~n~~lcg~~ 95 (457)
+..+.+++|++.|...
T Consensus 611 L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 611 LTELDMRFNPFDCTCE 626 (680)
T ss_dssp CSEEECTTCCCCBCCC
T ss_pred cCEEEccCCCcccCCc
Confidence 8888899999888643
No 352
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.67 E-value=1.8e-08 Score=96.45 Aligned_cols=85 Identities=22% Similarity=0.130 Sum_probs=45.8
Q ss_pred ccCCccCCeeeccCCcccccCCcccC-CCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFG-SLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~-~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
++++++|+.|+|++|++++..|..+. .+++|++|+|++|+++ .+|. ...+++|+.|+|++|++++.+|....+.++.
T Consensus 140 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~ 217 (317)
T 3o53_A 140 EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVT 217 (317)
T ss_dssp TGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC-EEEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCS
T ss_pred hhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc-cccc-ccccccCCEEECCCCcCCcchhhhcccCccc
Confidence 44556666666666666655555442 4556666666666655 3332 2235555555555555555544444444555
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 218 ~L~L~~N~ 225 (317)
T 3o53_A 218 WISLRNNK 225 (317)
T ss_dssp EEECTTSC
T ss_pred EEECcCCc
Confidence 55555553
No 353
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.67 E-value=5.2e-10 Score=99.55 Aligned_cols=83 Identities=23% Similarity=0.213 Sum_probs=51.5
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFST 82 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~ 82 (457)
++++++|+.|+|++|+|++ +| .++++++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++. |....+.++..
T Consensus 44 ~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l-~~~~~l~~L~~ 119 (198)
T 1ds9_A 44 LSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL-SGIEKLVNLRV 119 (198)
T ss_dssp HHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCH-HHHHHHHHSSE
T ss_pred HhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcC-CccccCCCCCE
Confidence 4456666666666666664 66 6666666666666666666 6666666666666666666666653 33334445555
Q ss_pred ccccccc
Q 044428 83 ESFSWNY 89 (457)
Q Consensus 83 ~~~~~n~ 89 (457)
+.+++|.
T Consensus 120 L~l~~N~ 126 (198)
T 1ds9_A 120 LYMSNNK 126 (198)
T ss_dssp EEESEEE
T ss_pred EECCCCc
Confidence 5665553
No 354
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.66 E-value=2.8e-08 Score=99.62 Aligned_cols=81 Identities=23% Similarity=0.147 Sum_probs=38.4
Q ss_pred cCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCcccccccccc
Q 044428 8 DLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFSTESFS 86 (457)
Q Consensus 8 ~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~~~~ 86 (457)
+|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..+. ...+.++..+.++
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 344555555555544444455555555555555555533334444555555555555555544332 2333444444444
Q ss_pred cc
Q 044428 87 WN 88 (457)
Q Consensus 87 ~n 88 (457)
+|
T Consensus 145 ~N 146 (440)
T 3zyj_A 145 NN 146 (440)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 355
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.66 E-value=2.7e-08 Score=98.03 Aligned_cols=87 Identities=22% Similarity=0.205 Sum_probs=60.4
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCcc-chhcCCCceEecccccCCCCCCC-CCCccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKS-LEALLYLKQLNVSQNRLEGEIPV-EGPFRN 79 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~-~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~ 79 (457)
.++++++|+.|+|++|++++..|..|+++++|++|+|++|+++ .+|.. +.++++|+.|++++|++++..|. ...+++
T Consensus 88 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 166 (390)
T 3o6n_A 88 AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 166 (390)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTT
T ss_pred hccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCC
Confidence 4566777777777777777655666777777777777777777 56654 46777777777777777766654 345566
Q ss_pred cccccccccc
Q 044428 80 FSTESFSWNY 89 (457)
Q Consensus 80 ~~~~~~~~n~ 89 (457)
+..+.+++|.
T Consensus 167 L~~L~l~~n~ 176 (390)
T 3o6n_A 167 LQNLQLSSNR 176 (390)
T ss_dssp CCEEECCSSC
T ss_pred CCEEECCCCc
Confidence 6666666664
No 356
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.64 E-value=4e-08 Score=94.47 Aligned_cols=84 Identities=23% Similarity=0.269 Sum_probs=49.6
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCC-CCCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIP-VEGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p-~~~~~~~~~ 81 (457)
++++++|+.|+|++|+++ .+|..+. ++|++|+|++|++++..|..+..+++|+.|+|++|++++..+ ....+.++.
T Consensus 167 ~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 243 (330)
T 1xku_A 167 FQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLR 243 (330)
T ss_dssp GGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCC
T ss_pred ccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCC
Confidence 445566666666666666 4555543 566666666666665555666666666666666666665554 223445555
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 244 ~L~L~~N~ 251 (330)
T 1xku_A 244 ELHLNNNK 251 (330)
T ss_dssp EEECCSSC
T ss_pred EEECCCCc
Confidence 55666554
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.63 E-value=2.6e-08 Score=94.13 Aligned_cols=83 Identities=29% Similarity=0.382 Sum_probs=62.7
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
.++++++|+.|+|++|++++ + +.++.+++|+.|+|++|++++ + ..+..+++|+.|++++|++++..| ...++++.
T Consensus 107 ~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~ 181 (291)
T 1h6t_A 107 SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQ 181 (291)
T ss_dssp GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCC
T ss_pred hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCc-c-hhhccCCCCCEEEccCCccccchh-hcCCCccC
Confidence 36677888888888888874 4 467788888888888888884 4 567788888888888888887766 55666777
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 182 ~L~L~~N~ 189 (291)
T 1h6t_A 182 NLYLSKNH 189 (291)
T ss_dssp EEECCSSC
T ss_pred EEECCCCc
Confidence 77777774
No 358
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.63 E-value=2.2e-08 Score=103.69 Aligned_cols=81 Identities=26% Similarity=0.231 Sum_probs=43.7
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFSTESFS 86 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~~~~~ 86 (457)
++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++|+.|+|++|+++. +|.. .+.++..+.++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~-~l~~L~~L~Ls 129 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC-PMASLRHLDLS 129 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC-CCTTCSEEECC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc-ccccCCEEECC
Confidence 345555555555554444455555555555555555554445555555555555555555553 3322 44555555555
Q ss_pred ccc
Q 044428 87 WNY 89 (457)
Q Consensus 87 ~n~ 89 (457)
+|.
T Consensus 130 ~N~ 132 (562)
T 3a79_B 130 FND 132 (562)
T ss_dssp SSC
T ss_pred CCC
Confidence 553
No 359
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.63 E-value=2.1e-08 Score=97.11 Aligned_cols=83 Identities=29% Similarity=0.363 Sum_probs=48.7
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFS 81 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~ 81 (457)
++.+++|+.|+|++|++++ + +.+..+++|+.|+|++|++++ + +.+..+++|+.|++++|++++..|. ...++++.
T Consensus 239 ~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 4556666666666666663 3 346666666666666666663 3 3455666666666666666655443 23345555
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|+
T Consensus 315 ~L~L~~n~ 322 (347)
T 4fmz_A 315 TLFLSQNH 322 (347)
T ss_dssp EEECCSSS
T ss_pred EEEccCCc
Confidence 66666654
No 360
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.63 E-value=4.5e-08 Score=91.10 Aligned_cols=81 Identities=21% Similarity=0.281 Sum_probs=57.6
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFST 82 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~ 82 (457)
+..+++|+.|+|++|+++ .+| .++.+++|+.|+|++|+|+ .+|. +..+++|+.|+|++|++++..+... .++..
T Consensus 37 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~N~l~~l~~~~~--~~L~~ 110 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRLKNLNGIPS--ACLSR 110 (263)
T ss_dssp HHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCSCCTTCCC--SSCCE
T ss_pred hhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccC-CChh-hccCCCCCEEECCCCccCCcCcccc--CcccE
Confidence 445677888888888887 666 6777888888888888887 4554 7777888888888888877543322 56666
Q ss_pred ccccccc
Q 044428 83 ESFSWNY 89 (457)
Q Consensus 83 ~~~~~n~ 89 (457)
+.+++|.
T Consensus 111 L~L~~N~ 117 (263)
T 1xeu_A 111 LFLDNNE 117 (263)
T ss_dssp EECCSSC
T ss_pred EEccCCc
Confidence 6676664
No 361
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.63 E-value=1.8e-07 Score=88.17 Aligned_cols=140 Identities=19% Similarity=0.076 Sum_probs=92.8
Q ss_pred cCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCC---ccceeeeeeecCCeeEEEEeccCC
Q 044428 177 ECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHR---NLIKILSGCSNLDFKALVLEFMPN 253 (457)
Q Consensus 177 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~ 253 (457)
..+.|+.|.++.||+++..+|+.++||+...........|.+|++.++.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 34679999999999999989999999997543332345689999999999875 466777653 36899999999
Q ss_pred CCHHH-----------HHhhCCC--------------------CCCHHHHH---HH-----------------HHHHHHH
Q 044428 254 GSLEK-----------WLYSHNY--------------------FLDILERL---NI-----------------MIDVGLA 282 (457)
Q Consensus 254 g~L~~-----------~l~~~~~--------------------~l~~~~~~---~i-----------------~~~ia~~ 282 (457)
+++.. .||.... .-+|..-. ++ ...+.+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 87531 2232210 01343211 00 1111122
Q ss_pred HHHHHh---cCCCCCeeeccCCCCCeeecCCCcEEEecccccc
Q 044428 283 LEYLHY---GHALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322 (457)
Q Consensus 283 l~~LH~---~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 322 (457)
+..+.. ....+.++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 223321 122567999999999999988 45889999 654
No 362
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.62 E-value=2.7e-08 Score=101.92 Aligned_cols=86 Identities=22% Similarity=0.252 Sum_probs=75.4
Q ss_pred cCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCC--CCCccchhcCCCceEecccccCCCCCCC--CCCccc
Q 044428 4 GGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSG--EIPKSLEALLYLKQLNVSQNRLEGEIPV--EGPFRN 79 (457)
Q Consensus 4 ~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g--~~p~~~~~~~~L~~l~l~~n~l~~~~p~--~~~~~~ 79 (457)
+.+++|+.|+|++|++++.+|..++++++|+.|+|++|++++ .+|..+..+++|+.|++++|++++.+|. ...+.+
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 678999999999999999999999999999999999999996 6778899999999999999999996664 345567
Q ss_pred cccccccccc
Q 044428 80 FSTESFSWNY 89 (457)
Q Consensus 80 ~~~~~~~~n~ 89 (457)
+..+.+++|.
T Consensus 401 L~~L~Ls~N~ 410 (520)
T 2z7x_B 401 LLSLNMSSNI 410 (520)
T ss_dssp CCEEECCSSC
T ss_pred CCEEECcCCC
Confidence 7888888874
No 363
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.62 E-value=4.4e-08 Score=101.31 Aligned_cols=88 Identities=17% Similarity=0.196 Sum_probs=62.9
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCC-CCCCcccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIP-VEGPFRNF 80 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p-~~~~~~~~ 80 (457)
+++++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+..+++|+.|++++|++++..+ ..+.+.++
T Consensus 47 ~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L 126 (570)
T 2z63_A 47 SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL 126 (570)
T ss_dssp TTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTC
T ss_pred HhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccc
Confidence 46677778888888887776556677777888888888887775555677777777777777777776654 24555666
Q ss_pred ccccccccc
Q 044428 81 STESFSWNY 89 (457)
Q Consensus 81 ~~~~~~~n~ 89 (457)
..+.+++|.
T Consensus 127 ~~L~L~~n~ 135 (570)
T 2z63_A 127 KELNVAHNL 135 (570)
T ss_dssp CEEECCSSC
T ss_pred cEEecCCCc
Confidence 677776664
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.62 E-value=5.3e-08 Score=92.01 Aligned_cols=83 Identities=29% Similarity=0.356 Sum_probs=71.1
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFST 82 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~ 82 (457)
++++++|+.|+|++|++++ +|. ++++++|++|+|++|++++ + +.+..+++|+.|++++|++++. +....+.++..
T Consensus 86 l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~ 160 (291)
T 1h6t_A 86 LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDT 160 (291)
T ss_dssp GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSE
T ss_pred cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCE
Confidence 6788999999999999984 554 9999999999999999994 5 5688999999999999999987 65667788888
Q ss_pred cccccccc
Q 044428 83 ESFSWNYA 90 (457)
Q Consensus 83 ~~~~~n~~ 90 (457)
+.+++|..
T Consensus 161 L~L~~N~l 168 (291)
T 1h6t_A 161 LSLEDNQI 168 (291)
T ss_dssp EECCSSCC
T ss_pred EEccCCcc
Confidence 88888853
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.62 E-value=3.8e-08 Score=102.52 Aligned_cols=83 Identities=29% Similarity=0.382 Sum_probs=55.8
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
.++.|++|+.|+|++|+|++ + +.+++|++|+.|+|++|+|++ + ..+..+++|+.|+|++|+|++.+| ...+.++.
T Consensus 104 ~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~ 178 (605)
T 1m9s_A 104 SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQ 178 (605)
T ss_dssp TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCC
T ss_pred hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCC-c-hhhcccCCCCEEECcCCcCCCchh-hccCCCCC
Confidence 45667777777777777774 3 346777777777777777774 3 556677777777777777776666 45556666
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 179 ~L~Ls~N~ 186 (605)
T 1m9s_A 179 NLYLSKNH 186 (605)
T ss_dssp EEECCSSC
T ss_pred EEECcCCC
Confidence 66666653
No 366
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.61 E-value=2.7e-08 Score=102.53 Aligned_cols=84 Identities=20% Similarity=0.167 Sum_probs=77.4
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCC-CCCccccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFSTESF 85 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~~~ 85 (457)
++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++|+.|+|++|++++.+|. .+.+.++..+.+
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 5899999999999988889999999999999999999988888999999999999999999999886 677888999999
Q ss_pred ccccc
Q 044428 86 SWNYA 90 (457)
Q Consensus 86 ~~n~~ 90 (457)
++|..
T Consensus 106 s~n~l 110 (549)
T 2z81_A 106 MGNPY 110 (549)
T ss_dssp TTCCC
T ss_pred CCCcc
Confidence 98864
No 367
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.60 E-value=4.5e-08 Score=93.32 Aligned_cols=82 Identities=23% Similarity=0.375 Sum_probs=53.5
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFST 82 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~ 82 (457)
++++++|+.|+|++|++++ +|. ++++++|+.|+|++|+++ .+|. +..+++|+.|++++|++++..+ ...+.++..
T Consensus 125 l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~ 199 (308)
T 1h6u_A 125 LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVS-DLTP-LANLSKLTTLKADDNKISDISP-LASLPNLIE 199 (308)
T ss_dssp GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCE
T ss_pred hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCC-CChh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCE
Confidence 5667777777777777773 443 667777777777777777 3444 6667777777777777766554 344555666
Q ss_pred ccccccc
Q 044428 83 ESFSWNY 89 (457)
Q Consensus 83 ~~~~~n~ 89 (457)
+.+++|.
T Consensus 200 L~L~~N~ 206 (308)
T 1h6u_A 200 VHLKNNQ 206 (308)
T ss_dssp EECTTSC
T ss_pred EEccCCc
Confidence 6666654
No 368
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.60 E-value=5.8e-08 Score=92.52 Aligned_cols=82 Identities=22% Similarity=0.369 Sum_probs=62.6
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFST 82 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~ 82 (457)
++++++|+.|+|++|++++ +| .++++++|++|+|++|+++ .+|. +..+++|+.|++++|++++..+ ...+.++..
T Consensus 81 ~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~ 155 (308)
T 1h6u_A 81 LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQIT-DVTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQY 155 (308)
T ss_dssp GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCC-CCGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCE
T ss_pred HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCC-Cchh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccE
Confidence 5678888888888888884 44 6888888888888888888 4554 7788888888888888887655 455667777
Q ss_pred ccccccc
Q 044428 83 ESFSWNY 89 (457)
Q Consensus 83 ~~~~~n~ 89 (457)
+.+++|.
T Consensus 156 L~l~~n~ 162 (308)
T 1h6u_A 156 LSIGNAQ 162 (308)
T ss_dssp EECCSSC
T ss_pred EEccCCc
Confidence 7777764
No 369
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.60 E-value=3.3e-08 Score=94.30 Aligned_cols=84 Identities=20% Similarity=0.115 Sum_probs=71.5
Q ss_pred CccCCeeeccCCcccccCCccc--CCCCCCCeEeCcCCccCCCCC----ccchhcCCCceEecccccCCCCCCC-CCCcc
Q 044428 6 LKDLATLSLAANKFHGPIPKSF--GSLISLESLDLSSNNLSGEIP----KSLEALLYLKQLNVSQNRLEGEIPV-EGPFR 78 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g~~p~~~--~~l~~l~~l~l~~n~l~g~~p----~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~ 78 (457)
+++|++|+|++|+++|.+|..+ +++++|++|+|++|++++.+| ..+..+++|+.|+|++|++++.+|. ...+.
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4679999999999999999988 899999999999999998776 3445688999999999999888764 35677
Q ss_pred ccccccccccc
Q 044428 79 NFSTESFSWNY 89 (457)
Q Consensus 79 ~~~~~~~~~n~ 89 (457)
++..+.+++|.
T Consensus 170 ~L~~L~Ls~N~ 180 (310)
T 4glp_A 170 ALTSLDLSDNP 180 (310)
T ss_dssp TCCEEECCSCT
T ss_pred CCCEEECCCCC
Confidence 88888999885
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.60 E-value=4.1e-08 Score=91.39 Aligned_cols=82 Identities=21% Similarity=0.247 Sum_probs=66.9
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
.++.+++|+.|+|++|+|++ +|+ ++++++|+.|+|++|+++ .+|.... ++|+.|+|++|++++. |....+.++.
T Consensus 58 ~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~-~l~~~~~--~~L~~L~L~~N~l~~~-~~l~~l~~L~ 131 (263)
T 1xeu_A 58 GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLK-NLNGIPS--ACLSRLFLDNNELRDT-DSLIHLKNLE 131 (263)
T ss_dssp TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCS-CCTTCCC--SSCCEEECCSSCCSBS-GGGTTCTTCC
T ss_pred HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccC-CcCcccc--CcccEEEccCCccCCC-hhhcCccccc
Confidence 46778899999999999994 555 899999999999999999 5665433 8899999999999875 4566677888
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 132 ~L~Ls~N~ 139 (263)
T 1xeu_A 132 ILSIRNNK 139 (263)
T ss_dssp EEECTTSC
T ss_pred EEECCCCc
Confidence 88888875
No 371
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.58 E-value=3.5e-08 Score=90.30 Aligned_cols=87 Identities=15% Similarity=0.101 Sum_probs=72.6
Q ss_pred CccCCccCCeeeccC-CcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCc---eEecccc-cCCCCCCC-CC
Q 044428 2 TIGGLKDLATLSLAA-NKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLK---QLNVSQN-RLEGEIPV-EG 75 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~-N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~---~l~l~~n-~l~~~~p~-~~ 75 (457)
.++++++|+.|+|++ |+|++..|..|.++++|++|+|++|++++ +|. +..+++|+ .|++++| ++++..+. ..
T Consensus 75 ~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~ 152 (239)
T 2xwt_C 75 SFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQ 152 (239)
T ss_dssp TEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTT
T ss_pred HcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCccccc
Confidence 467899999999998 99996555789999999999999999994 887 88888888 9999999 88877664 34
Q ss_pred Cccccc-ccccccccc
Q 044428 76 PFRNFS-TESFSWNYA 90 (457)
Q Consensus 76 ~~~~~~-~~~~~~n~~ 90 (457)
.+.++. .+.+++|..
T Consensus 153 ~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 153 GLCNETLTLKLYNNGF 168 (239)
T ss_dssp TTBSSEEEEECCSCCC
T ss_pred chhcceeEEEcCCCCC
Confidence 566777 888887743
No 372
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.56 E-value=6.1e-07 Score=85.35 Aligned_cols=136 Identities=14% Similarity=0.056 Sum_probs=94.4
Q ss_pred CccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCC---ccceeeeeee-cCCeeEEEEeccCCC
Q 044428 179 NLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHR---NLIKILSGCS-NLDFKALVLEFMPNG 254 (457)
Q Consensus 179 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~g 254 (457)
+.++.|....||+. |..+++|+... ......+.+|.+++..+.+. .+.+.+.++. ..+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 46788888899988 56788998532 23345788999999999753 2455666663 445678999999998
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 044428 255 SLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH-------------------------------------------- 290 (457)
Q Consensus 255 ~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------------- 290 (457)
++.+.... .++..++..++.+++..|..||.-.
T Consensus 99 ~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 99 ILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp ECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred ECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 88763221 1344455555556666665555311
Q ss_pred ------------CCCCeeeccCCCCCeeecC---CCc-EEEeccccccc
Q 044428 291 ------------ALAPIIHCDLKPSNILLDE---NMV-AHVSDFGISKL 323 (457)
Q Consensus 291 ------------~~~~ivH~dlk~~NIll~~---~~~-~kl~Dfg~~~~ 323 (457)
....++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1345799999999999987 455 58999998764
No 373
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.56 E-value=8.4e-08 Score=99.90 Aligned_cols=82 Identities=30% Similarity=0.369 Sum_probs=59.1
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFST 82 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~ 82 (457)
+++|++|+.|+|++|+|++ +| .+++|++|+.|+|++|+|++ + +.+..+++|+.|+|++|++++. +....+.++..
T Consensus 83 l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~ 157 (605)
T 1m9s_A 83 LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDT 157 (605)
T ss_dssp GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSE
T ss_pred hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCE
Confidence 5667778888888888773 44 67777888888888888774 4 3577777788888888877776 55556667777
Q ss_pred ccccccc
Q 044428 83 ESFSWNY 89 (457)
Q Consensus 83 ~~~~~n~ 89 (457)
+.+++|.
T Consensus 158 L~Ls~N~ 164 (605)
T 1m9s_A 158 LSLEDNQ 164 (605)
T ss_dssp EECCSSC
T ss_pred EECcCCc
Confidence 7777764
No 374
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.56 E-value=4.8e-08 Score=94.90 Aligned_cols=87 Identities=28% Similarity=0.221 Sum_probs=76.1
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCcc-chhcCCCceEecccccCCCCCC--CCCCcc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKS-LEALLYLKQLNVSQNRLEGEIP--VEGPFR 78 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~-~~~~~~L~~l~l~~n~l~~~~p--~~~~~~ 78 (457)
.++++++|+.|+|++|++++..|..|+++++|++|+|++|+++ .+|.. +.++++|+.|++++|++++..+ ....++
T Consensus 71 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~ 149 (353)
T 2z80_A 71 DLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLT 149 (353)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCT
T ss_pred HhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCC
Confidence 5788999999999999999877888999999999999999999 56665 8899999999999999997655 345677
Q ss_pred ccccccccccc
Q 044428 79 NFSTESFSWNY 89 (457)
Q Consensus 79 ~~~~~~~~~n~ 89 (457)
++..+.+++|.
T Consensus 150 ~L~~L~l~~n~ 160 (353)
T 2z80_A 150 KLQILRVGNMD 160 (353)
T ss_dssp TCCEEEEEESS
T ss_pred CCcEEECCCCc
Confidence 88888888874
No 375
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.56 E-value=6.7e-07 Score=83.20 Aligned_cols=136 Identities=18% Similarity=0.101 Sum_probs=98.1
Q ss_pred ccCCCCce-EEEEEEeC-CCCEEEEEEecccchhhHHHHHHHHHHHhhcC-CCccceeeeeeecCCeeEEEEeccCCCCH
Q 044428 180 LLGIGSFG-SVYKGTLS-DGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-HRNLIKILSGCSNLDFKALVLEFMPNGSL 256 (457)
Q Consensus 180 ~lg~G~~g-~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L 256 (457)
.+..|..| .||+.... ++..++||+-... ....+.+|...|+.+. +-.+.++++++...+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556665 68988765 5678999986533 3456788999998884 33466788888888999999999999888
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 044428 257 EKWLYSHNYFLDILERLNIMIDVGLALEYLHYGH---------------------------------------------- 290 (457)
Q Consensus 257 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------------- 290 (457)
.+...... .....+..+++..|..||.-.
T Consensus 108 ~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 77654321 123345666677777776211
Q ss_pred --------CCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 291 --------ALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 291 --------~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
....++|+|+.+.||++++++.+-|.||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112379999999999999887778999998764
No 376
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.55 E-value=3.4e-08 Score=91.51 Aligned_cols=65 Identities=25% Similarity=0.366 Sum_probs=35.2
Q ss_pred CccCCeeeccCCcccc--cCCcccCCCCCCCeEeCcCCccCCCCCccchhcC--CCceEecccccCCCCCC
Q 044428 6 LKDLATLSLAANKFHG--PIPKSFGSLISLESLDLSSNNLSGEIPKSLEALL--YLKQLNVSQNRLEGEIP 72 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g--~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~--~L~~l~l~~n~l~~~~p 72 (457)
+++|+.|+|++|+|++ .+|..++.+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+.+.+|
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 4555666666666655 4445555556666666666665532 2333333 55556666665555444
No 377
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.53 E-value=7.6e-08 Score=101.93 Aligned_cols=85 Identities=21% Similarity=0.222 Sum_probs=46.0
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccccCCCCCCC-CCCcccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQNRLEGEIPV-EGPFRNF 80 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~ 80 (457)
++++++|+.|+|++|++++..|..|+++++|++|+|++|+++ .+|. .+.++++|++|+|++|++++.+|. .+.+.++
T Consensus 45 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 123 (680)
T 1ziw_A 45 FTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNL 123 (680)
T ss_dssp GGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTC
T ss_pred HhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCC
Confidence 455555666666666665555555555556666666665555 3443 455555555555555555554432 2334444
Q ss_pred cccccccc
Q 044428 81 STESFSWN 88 (457)
Q Consensus 81 ~~~~~~~n 88 (457)
..+.+++|
T Consensus 124 ~~L~Ls~n 131 (680)
T 1ziw_A 124 ITLDLSHN 131 (680)
T ss_dssp CEEECCSS
T ss_pred CEEECCCC
Confidence 55555444
No 378
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.48 E-value=1.5e-07 Score=95.02 Aligned_cols=64 Identities=28% Similarity=0.392 Sum_probs=30.7
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCC
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGE 70 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~ 70 (457)
++.+++|+.|+|++|++++. |+ ++.+++|+.|+|++|++++..| +..+++|+.|++++|++++.
T Consensus 283 ~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 283 LAGLTALTNLELNENQLEDI-SP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp GTTCTTCSEEECCSSCCSCC-GG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred ccCCCccCeEEcCCCcccCc-hh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 34455555555555555532 22 4455555555555555553333 34444444444444444443
No 379
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.48 E-value=4.6e-08 Score=93.61 Aligned_cols=83 Identities=22% Similarity=0.092 Sum_probs=50.5
Q ss_pred CccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccch-hcCCCceEecccccCCCCCCCCCCcccccccc
Q 044428 6 LKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLE-ALLYLKQLNVSQNRLEGEIPVEGPFRNFSTES 84 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~-~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~~~ 84 (457)
+++|+.|+|++|++++..|..++.+++|++|+|++|++++..|..+. .+++|+.|+|++|++++.. ....+.++..+.
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~l~~L~~L~ 197 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLD 197 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc-cccccccCCEEE
Confidence 45666666666666655555666666666666666666655555553 5666666666666666552 223355566666
Q ss_pred ccccc
Q 044428 85 FSWNY 89 (457)
Q Consensus 85 ~~~n~ 89 (457)
+++|.
T Consensus 198 Ls~N~ 202 (317)
T 3o53_A 198 LSSNK 202 (317)
T ss_dssp CCSSC
T ss_pred CCCCc
Confidence 66653
No 380
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.46 E-value=2.6e-07 Score=93.08 Aligned_cols=60 Identities=23% Similarity=0.305 Sum_probs=26.6
Q ss_pred CCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCC
Q 044428 5 GLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEG 69 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~ 69 (457)
++++|+.|+|++|+|+| +| +++.+++|++|+|++|+|++ +| ++.+++|+.|++++|++++
T Consensus 40 ~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~ 99 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN 99 (457)
T ss_dssp HHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred HcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce
Confidence 34444444444444442 23 34444444444444444442 22 4444444444444444444
No 381
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.43 E-value=1.2e-08 Score=90.61 Aligned_cols=84 Identities=23% Similarity=0.314 Sum_probs=72.0
Q ss_pred cCCccCCeeeccCCcccccCCc------ccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCc
Q 044428 4 GGLKDLATLSLAANKFHGPIPK------SFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPF 77 (457)
Q Consensus 4 ~~l~~L~~l~l~~N~l~g~~p~------~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~ 77 (457)
.....++.++|+.|.|+|.+|. .|+++++|++|+|++|++++ +| .+..+++|+.|++++|+++..++....+
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~ 92 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVA 92 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcC
Confidence 4567889999999999999998 89999999999999999995 88 9999999999999999999544333344
Q ss_pred cccccccccccc
Q 044428 78 RNFSTESFSWNY 89 (457)
Q Consensus 78 ~~~~~~~~~~n~ 89 (457)
+++..+.+++|.
T Consensus 93 ~~L~~L~L~~N~ 104 (198)
T 1ds9_A 93 DTLEELWISYNQ 104 (198)
T ss_dssp HHCSEEEEEEEE
T ss_pred CcCCEEECcCCc
Confidence 678888888874
No 382
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.43 E-value=2.9e-07 Score=88.89 Aligned_cols=83 Identities=22% Similarity=0.374 Sum_probs=56.3
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
.++.+++|+.|+|++|+++ .+|. +.++++|++|+|++|+++ .+| .+..+++|+.|++++|++++..+ ...+.++.
T Consensus 61 ~~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~-~~~-~~~~l~~L~~L~l~~n~i~~~~~-~~~l~~L~ 135 (347)
T 4fmz_A 61 GIEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNLRELYLNEDNISDISP-LANLTKMY 135 (347)
T ss_dssp TGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECTTSCCCCCGG-GTTCTTCC
T ss_pred hhhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCccc-Cch-HHcCCCcCCEEECcCCcccCchh-hccCCcee
Confidence 3556777777777777777 4555 777777777777777777 444 46777777777777777776544 44556666
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 136 ~L~l~~n~ 143 (347)
T 4fmz_A 136 SLNLGANH 143 (347)
T ss_dssp EEECTTCT
T ss_pred EEECCCCC
Confidence 66666664
No 383
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.41 E-value=8.5e-07 Score=86.40 Aligned_cols=142 Identities=11% Similarity=0.143 Sum_probs=90.2
Q ss_pred cCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCc--cceeeeeeecC-CeeEEEEeccCC
Q 044428 177 ECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRN--LIKILSGCSNL-DFKALVLEFMPN 253 (457)
Q Consensus 177 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~ 253 (457)
..+.++.|....+|+... +|+.+++|+.... ..+.+|..++..+.... +.++++++... +..++||||++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 345788999999999986 5788999987532 25788999998886533 45567666654 568999999997
Q ss_pred CCHHHH------------------HhhCCC----------------CCCHHHH---------------------HHHHHH
Q 044428 254 GSLEKW------------------LYSHNY----------------FLDILER---------------------LNIMID 278 (457)
Q Consensus 254 g~L~~~------------------l~~~~~----------------~l~~~~~---------------------~~i~~~ 278 (457)
.++.+. |+.... .-.|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 655321 111100 0011111 011111
Q ss_pred HHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccccc
Q 044428 279 VGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLL 324 (457)
Q Consensus 279 ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 324 (457)
+...+.++......+.++|+|+.+.||+++++..+.|.||+.+..-
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 2222233322111256899999999999988878889999988753
No 384
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.40 E-value=3.4e-07 Score=92.25 Aligned_cols=64 Identities=28% Similarity=0.264 Sum_probs=56.0
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCC
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIP 72 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p 72 (457)
++.+++|+.|+|++|+|++ + .++++++|+.|+|++|+|+| +| +..+++|+.|++++|++++.++
T Consensus 187 l~~l~~L~~L~l~~N~l~~-~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~ 250 (457)
T 3bz5_A 187 VSQNKLLNRLNCDTNNITK-L--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV 250 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-C--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC
T ss_pred cccCCCCCEEECcCCcCCe-e--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH
Confidence 6778899999999999996 4 48899999999999999996 77 8889999999999999998754
No 385
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.40 E-value=4e-07 Score=93.91 Aligned_cols=55 Identities=27% Similarity=0.459 Sum_probs=23.5
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCC
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEG 69 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~ 69 (457)
++|+.|+|++|+|++ ||. +++ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~ 154 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM 154 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc
Confidence 344444444444443 444 332 44444444444442 443 23444444444444444
No 386
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.39 E-value=3.2e-07 Score=92.64 Aligned_cols=83 Identities=20% Similarity=0.300 Sum_probs=64.9
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFS 81 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~ 81 (457)
.+..+++|+.|+|++|++++ +|+ ++++++|++|+|++|++++ +|+ +.++++|+.|++++|++++..+ ...++++.
T Consensus 63 ~~~~l~~L~~L~Ls~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~ 137 (466)
T 1o6v_A 63 GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIAD-ITP-LANLTNLTGLTLFNNQITDIDP-LKNLTNLN 137 (466)
T ss_dssp TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GTTCTTCS
T ss_pred chhhhcCCCEEECCCCccCC-chh-hhccccCCEEECCCCcccc-Chh-hcCCCCCCEEECCCCCCCCChH-HcCCCCCC
Confidence 45678888888898888884 555 8888888888888888884 444 8888888888888888887755 55667777
Q ss_pred cccccccc
Q 044428 82 TESFSWNY 89 (457)
Q Consensus 82 ~~~~~~n~ 89 (457)
.+.+++|.
T Consensus 138 ~L~l~~n~ 145 (466)
T 1o6v_A 138 RLELSSNT 145 (466)
T ss_dssp EEEEEEEE
T ss_pred EEECCCCc
Confidence 77777764
No 387
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.37 E-value=3.4e-07 Score=94.40 Aligned_cols=75 Identities=27% Similarity=0.202 Sum_probs=50.2
Q ss_pred CCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccc----
Q 044428 5 GLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNF---- 80 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~---- 80 (457)
.+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. +. ++|+.|+|++|+|+.. |.... ++
T Consensus 138 ~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~l-p~~~~--~L~~~~ 206 (571)
T 3cvr_A 138 LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESL-PAVPV--RNHHSE 206 (571)
T ss_dssp CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSC-CCCC---------
T ss_pred cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCch-hhHHH--hhhccc
Confidence 35677888888888874 776 46778888888888874 777 54 7788888888877743 33222 45
Q ss_pred ---cccccccccc
Q 044428 81 ---STESFSWNYA 90 (457)
Q Consensus 81 ---~~~~~~~n~~ 90 (457)
..+.+++|..
T Consensus 207 ~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 207 ETEIFFRCRENRI 219 (571)
T ss_dssp -CCEEEECCSSCC
T ss_pred ccceEEecCCCcc
Confidence 6666666654
No 388
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.34 E-value=6.3e-07 Score=87.04 Aligned_cols=79 Identities=8% Similarity=-0.042 Sum_probs=55.5
Q ss_pred Ccc-CCCCceEEEEEEeC-------CCCEEEEEEecccc---hhhHHHHHHHHHHHhhcC-C--CccceeeeeeecC---
Q 044428 179 NLL-GIGSFGSVYKGTLS-------DGTNVAIKIFNLQL---ERTFVSFNSECEVLRNVR-H--RNLIKILSGCSNL--- 241 (457)
Q Consensus 179 ~~l-g~G~~g~Vy~~~~~-------~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~--- 241 (457)
+.| +.|....+|+.... +++.+++|+..... ......+.+|..+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 467 88999999998764 26789999865432 101245778888888884 2 3466777777655
Q ss_pred CeeEEEEeccCCCCHH
Q 044428 242 DFKALVLEFMPNGSLE 257 (457)
Q Consensus 242 ~~~~lv~e~~~~g~L~ 257 (457)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999987654
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.30 E-value=4.6e-08 Score=96.26 Aligned_cols=86 Identities=17% Similarity=0.232 Sum_probs=53.8
Q ss_pred cCCccCCeeeccCCccc--c---cCCcccCCCCCCCeEeCcCCccC----CCCCccchhcCCCceEecccccCCCC----
Q 044428 4 GGLKDLATLSLAANKFH--G---PIPKSFGSLISLESLDLSSNNLS----GEIPKSLEALLYLKQLNVSQNRLEGE---- 70 (457)
Q Consensus 4 ~~l~~L~~l~l~~N~l~--g---~~p~~~~~l~~l~~l~l~~n~l~----g~~p~~~~~~~~L~~l~l~~n~l~~~---- 70 (457)
+.+++|+.|+|++|+|+ | .+|..+.++++|+.|+|++|+++ +.+|..+..+++|+.|+|++|++++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 45667777777777776 3 34446667777777777777774 46666667777777777777776654
Q ss_pred CCCC---CCccccccccccccc
Q 044428 71 IPVE---GPFRNFSTESFSWNY 89 (457)
Q Consensus 71 ~p~~---~~~~~~~~~~~~~n~ 89 (457)
+|.. +.++++..+.+++|.
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~ 285 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNE 285 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSC
T ss_pred HHHHHhhccCCCeEEEECcCCc
Confidence 2221 224556666666654
No 390
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.30 E-value=1.3e-06 Score=87.89 Aligned_cols=75 Identities=20% Similarity=0.264 Sum_probs=45.7
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFSTESFS 86 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~~~~~ 86 (457)
++|+.|+|++|++++ +| +|+++++|++|++++|++++ +|..+ .+|+.|++++|++++ +|..+.+.++..+.++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LPELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-CccccCCCCCCEEECC
Confidence 467777777777774 66 47777777777777777773 66543 356666666666665 3344444444444444
Q ss_pred cc
Q 044428 87 WN 88 (457)
Q Consensus 87 ~n 88 (457)
+|
T Consensus 204 ~N 205 (454)
T 1jl5_A 204 NN 205 (454)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 391
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.29 E-value=1.4e-06 Score=87.70 Aligned_cols=74 Identities=24% Similarity=0.293 Sum_probs=50.7
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCcccccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFSTESFS 86 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~~~~~ 86 (457)
++|+.|+|++|++++ +|.. .++|++|+|++|++++ +| .+.++++|+.|++++|++++. |.. ..++..+.++
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~l-p~~--~~~L~~L~L~ 181 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKL-PDL--PPSLEFIAAG 181 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCC-CCC--CTTCCEEECC
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCccc-CCC--cccccEEECc
Confidence 455555555555552 3322 1578888888888884 88 588888888888888888873 432 2467777777
Q ss_pred ccc
Q 044428 87 WNY 89 (457)
Q Consensus 87 ~n~ 89 (457)
+|.
T Consensus 182 ~n~ 184 (454)
T 1jl5_A 182 NNQ 184 (454)
T ss_dssp SSC
T ss_pred CCc
Confidence 774
No 392
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.28 E-value=6.1e-08 Score=93.27 Aligned_cols=81 Identities=16% Similarity=0.147 Sum_probs=47.2
Q ss_pred ccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCC-CCccchhcCCCceEecccccCCCCCCC-CCCcccccccc
Q 044428 7 KDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGE-IPKSLEALLYLKQLNVSQNRLEGEIPV-EGPFRNFSTES 84 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~-~p~~~~~~~~L~~l~l~~n~l~~~~p~-~~~~~~~~~~~ 84 (457)
++|+.|+|++|.+++..|. +.++++|++|+|++|++++. +|..+..+++|+.|++++|++++..|. ...++++..+.
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5566666666666654443 44566666666666666654 666666666666666666666544332 23345555555
Q ss_pred cccc
Q 044428 85 FSWN 88 (457)
Q Consensus 85 ~~~n 88 (457)
+++|
T Consensus 149 L~~~ 152 (336)
T 2ast_B 149 LSGC 152 (336)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 5555
No 393
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.21 E-value=1.6e-07 Score=87.02 Aligned_cols=84 Identities=23% Similarity=0.221 Sum_probs=63.0
Q ss_pred CCccCCe--eeccCCcc---cccCCcccCCCCCCCeEeCcCCccCC--CCCccchhcCCCceEecccccCCCCCCCCCCc
Q 044428 5 GLKDLAT--LSLAANKF---HGPIPKSFGSLISLESLDLSSNNLSG--EIPKSLEALLYLKQLNVSQNRLEGEIPVEGPF 77 (457)
Q Consensus 5 ~l~~L~~--l~l~~N~l---~g~~p~~~~~l~~l~~l~l~~n~l~g--~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~ 77 (457)
..+.|.. ++++.|+. .+.++....++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. .....+
T Consensus 139 ~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l 217 (267)
T 3rw6_A 139 SDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKI 217 (267)
T ss_dssp GCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGG
T ss_pred CCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhc
Confidence 3344444 67788844 33333333678999999999999998 7778889999999999999999986 223334
Q ss_pred c--ccccccccccc
Q 044428 78 R--NFSTESFSWNY 89 (457)
Q Consensus 78 ~--~~~~~~~~~n~ 89 (457)
. ++..+.+++|+
T Consensus 218 ~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 218 KGLKLEELWLDGNS 231 (267)
T ss_dssp TTSCCSEEECTTST
T ss_pred ccCCcceEEccCCc
Confidence 4 77888899986
No 394
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.20 E-value=1.8e-06 Score=90.01 Aligned_cols=52 Identities=31% Similarity=0.210 Sum_probs=26.4
Q ss_pred CCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccccccccccc
Q 044428 31 ISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFSTESFSWNY 89 (457)
Q Consensus 31 ~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~~~~~~n~ 89 (457)
++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|+..++ .+.++..+.+++|.
T Consensus 221 ~~L~~L~Ls~N~L~-~lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~ 272 (622)
T 3g06_A 221 SGLKELIVSGNRLT-SLP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQ 272 (622)
T ss_dssp TTCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSC
T ss_pred CCCCEEEccCCccC-cCC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCC
Confidence 44555566666555 355 233455555555555553322 23445555555553
No 395
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.19 E-value=1.4e-07 Score=92.72 Aligned_cols=83 Identities=18% Similarity=0.288 Sum_probs=54.8
Q ss_pred ccCCeeeccCCccc-ccCC---cccCCCCCCCeEeCcCCccC--C---CCCccchhcCCCceEecccccCC----CCCCC
Q 044428 7 KDLATLSLAANKFH-GPIP---KSFGSLISLESLDLSSNNLS--G---EIPKSLEALLYLKQLNVSQNRLE----GEIPV 73 (457)
Q Consensus 7 ~~L~~l~l~~N~l~-g~~p---~~~~~l~~l~~l~l~~n~l~--g---~~p~~~~~~~~L~~l~l~~n~l~----~~~p~ 73 (457)
++|+.|+|++|+|+ +.+| ..+.++++|++|+|++|+++ | .+|..+..+++|+.|+|++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 67777777777776 4555 45667777777777777777 3 34446777777777777777775 33332
Q ss_pred -CCCccccccccccccc
Q 044428 74 -EGPFRNFSTESFSWNY 89 (457)
Q Consensus 74 -~~~~~~~~~~~~~~n~ 89 (457)
...++++..+.+++|.
T Consensus 239 ~l~~~~~L~~L~L~~n~ 255 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCL 255 (386)
T ss_dssp HGGGCTTCCEEECTTCC
T ss_pred HHccCCCcCEEECCCCC
Confidence 2344566666676664
No 396
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.17 E-value=1.2e-07 Score=91.12 Aligned_cols=86 Identities=16% Similarity=0.154 Sum_probs=72.4
Q ss_pred ccCCccCCeeeccCCccccc-CCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccc-cCCCC-CCC-CCCcc
Q 044428 3 IGGLKDLATLSLAANKFHGP-IPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQN-RLEGE-IPV-EGPFR 78 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~-~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n-~l~~~-~p~-~~~~~ 78 (457)
+.++++|+.|+|++|++++. +|..+.++++|++|+|++|++++.+|..+..+++|+.|+|++| .+++. +|. ...++
T Consensus 89 ~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~ 168 (336)
T 2ast_B 89 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 168 (336)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCC
Confidence 56789999999999999876 8888999999999999999999889999999999999999999 67752 333 34466
Q ss_pred cccccccccc
Q 044428 79 NFSTESFSWN 88 (457)
Q Consensus 79 ~~~~~~~~~n 88 (457)
++..+.+++|
T Consensus 169 ~L~~L~l~~~ 178 (336)
T 2ast_B 169 RLDELNLSWC 178 (336)
T ss_dssp TCCEEECCCC
T ss_pred CCCEEcCCCC
Confidence 7888888877
No 397
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.13 E-value=1.5e-06 Score=90.57 Aligned_cols=77 Identities=22% Similarity=0.171 Sum_probs=56.6
Q ss_pred CccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccccCCCCCCCCCCccccccccc
Q 044428 6 LKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNRLEGEIPVEGPFRNFSTESF 85 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~~~~~~~~~~ 85 (457)
+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+..++....++++..+.+
T Consensus 220 ~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 220 PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNL 291 (622)
T ss_dssp CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEEC
T ss_pred CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEe
Confidence 3678888888888884 77 45677888888888888 6776 567788888888888855444455667777777
Q ss_pred ccccc
Q 044428 86 SWNYA 90 (457)
Q Consensus 86 ~~n~~ 90 (457)
++|+.
T Consensus 292 ~~N~l 296 (622)
T 3g06_A 292 EGNPL 296 (622)
T ss_dssp CSCCC
T ss_pred cCCCC
Confidence 77753
No 398
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.08 E-value=3e-06 Score=82.04 Aligned_cols=83 Identities=20% Similarity=0.170 Sum_probs=64.2
Q ss_pred ccCCeeeccCCcccccCCc-ccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCc-eEecccccCCCCCCCC-CCcccccc
Q 044428 7 KDLATLSLAANKFHGPIPK-SFGSLISLESLDLSSNNLSGEIPK-SLEALLYLK-QLNVSQNRLEGEIPVE-GPFRNFST 82 (457)
Q Consensus 7 ~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~-~l~l~~n~l~~~~p~~-~~~~~~~~ 82 (457)
++|+.|+|++|+|+ .||+ .|.+|++|++|+|++|++.+.+|. .|.++++|. .+.+++|+++...|.. ..+.++..
T Consensus 30 ~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~ 108 (350)
T 4ay9_X 30 RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQY 108 (350)
T ss_dssp TTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCE
T ss_pred CCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccc
Confidence 47899999999998 6764 689999999999999998777876 567787765 4667778888877653 45667777
Q ss_pred cccccccc
Q 044428 83 ESFSWNYA 90 (457)
Q Consensus 83 ~~~~~n~~ 90 (457)
+.+++|..
T Consensus 109 L~l~~n~l 116 (350)
T 4ay9_X 109 LLISNTGI 116 (350)
T ss_dssp EEEEEECC
T ss_pred cccccccc
Confidence 77777753
No 399
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.08 E-value=2.6e-05 Score=74.79 Aligned_cols=140 Identities=14% Similarity=0.089 Sum_probs=79.3
Q ss_pred CccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcC-----CCccceee-e--eeecCCeeEEEEec
Q 044428 179 NLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-----HRNLIKIL-S--GCSNLDFKALVLEF 250 (457)
Q Consensus 179 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lv~e~ 250 (457)
+.|+.|..+.||+....+| .+++|+..... ..+..|..++..+. .|.++... | +....+..+++|+|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3566677899999987655 48999987532 22334555555442 23333311 1 11245678899999
Q ss_pred cCCCCHH--------------HHHhhC--CC-----------CCCHHHHH------------------------------
Q 044428 251 MPNGSLE--------------KWLYSH--NY-----------FLDILERL------------------------------ 273 (457)
Q Consensus 251 ~~~g~L~--------------~~l~~~--~~-----------~l~~~~~~------------------------------ 273 (457)
++|..+. ..+|.. .. ...|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 112211 00 11232211
Q ss_pred -HHHHHHHHHHHHHHh--------c-CCCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 274 -NIMIDVGLALEYLHY--------G-HALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 274 -~i~~~ia~~l~~LH~--------~-~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
.+...+..++.+|+. . .....++|+|+++.||+++.++.+.|.||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 011123345666653 1 0146799999999999998888999999997653
No 400
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.08 E-value=8.7e-07 Score=86.31 Aligned_cols=84 Identities=23% Similarity=0.269 Sum_probs=64.8
Q ss_pred CccCCeeeccCCcccccCC----cccCCCC-CCCeEeCcCCccCCCCCccchhc-----CCCceEecccccCCCCCCC--
Q 044428 6 LKDLATLSLAANKFHGPIP----KSFGSLI-SLESLDLSSNNLSGEIPKSLEAL-----LYLKQLNVSQNRLEGEIPV-- 73 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g~~p----~~~~~l~-~l~~l~l~~n~l~g~~p~~~~~~-----~~L~~l~l~~n~l~~~~p~-- 73 (457)
.++|+.|+|++|+|++.-+ ..|.+++ +|++|+|++|++++..+..+..+ ++|+.|+|++|++++..+.
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 4558999999999985555 6777888 89999999999997777777776 8899999999998876653
Q ss_pred ---CCCc-cccccccccccc
Q 044428 74 ---EGPF-RNFSTESFSWNY 89 (457)
Q Consensus 74 ---~~~~-~~~~~~~~~~n~ 89 (457)
...+ .++..+.+++|.
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~ 120 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWND 120 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSC
T ss_pred HHHHHhCCCCccEEECcCCc
Confidence 1222 567777777775
No 401
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=98.07 E-value=1.7e-05 Score=74.50 Aligned_cols=79 Identities=16% Similarity=0.112 Sum_probs=56.9
Q ss_pred cCCcCCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCC---ccceeeeeeecCCeeEEEEec
Q 044428 174 EFDECNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHR---NLIKILSGCSNLDFKALVLEF 250 (457)
Q Consensus 174 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~ 250 (457)
+....+.+|.|..+.||+.++.||+.|+||+...........|.+|...|+.+.-. .+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 34455678999999999999999999999987654433344678899999888422 233444432 34789999
Q ss_pred cCCCCH
Q 044428 251 MPNGSL 256 (457)
Q Consensus 251 ~~~g~L 256 (457)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
No 402
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.06 E-value=2e-05 Score=77.65 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=49.0
Q ss_pred CCccCCCCceEEEEEEeC-CCCEEEEEEecccch-------hhHHHHHHHHHHHhhcCC--Cccc-eeeeeeecCCeeEE
Q 044428 178 CNLLGIGSFGSVYKGTLS-DGTNVAIKIFNLQLE-------RTFVSFNSECEVLRNVRH--RNLI-KILSGCSNLDFKAL 246 (457)
Q Consensus 178 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~h--~niv-~l~~~~~~~~~~~l 246 (457)
.+.+|.|.++.||+++.. +++.++||....... .....+..|.+++..+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357899999999999764 568899998653211 122346778888888742 4444 44443 3445689
Q ss_pred EEeccCCC
Q 044428 247 VLEFMPNG 254 (457)
Q Consensus 247 v~e~~~~g 254 (457)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 403
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.05 E-value=2.5e-06 Score=82.60 Aligned_cols=58 Identities=21% Similarity=0.240 Sum_probs=28.5
Q ss_pred eeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccccCCCCCC
Q 044428 11 TLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQNRLEGEIP 72 (457)
Q Consensus 11 ~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n~l~~~~p 72 (457)
.++-++|+|+ .||..+ .+++++|+|++|+|+ .||. .|.++++|+.|+|++|++.+.+|
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~ 71 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIE 71 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEEC
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccC
Confidence 4444555555 455444 234555555555555 4443 34555555555555555544443
No 404
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.99 E-value=8.2e-07 Score=86.49 Aligned_cols=87 Identities=17% Similarity=0.181 Sum_probs=69.3
Q ss_pred ccCCc-cCCeeeccCCcccccCCcccCCC-----CCCCeEeCcCCccCCCCCccchhc-----CCCceEecccccCCCCC
Q 044428 3 IGGLK-DLATLSLAANKFHGPIPKSFGSL-----ISLESLDLSSNNLSGEIPKSLEAL-----LYLKQLNVSQNRLEGEI 71 (457)
Q Consensus 3 ~~~l~-~L~~l~l~~N~l~g~~p~~~~~l-----~~l~~l~l~~n~l~g~~p~~~~~~-----~~L~~l~l~~n~l~~~~ 71 (457)
+.+++ +|+.|+|++|+|++..+..++.+ ++|++|+|++|++++..|..+... ++|+.|+|++|++++..
T Consensus 46 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 125 (362)
T 3goz_A 46 FANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKS 125 (362)
T ss_dssp HHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSC
T ss_pred HHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHH
Confidence 45677 89999999999998878888776 999999999999998777766554 89999999999998765
Q ss_pred CCC-----CC-ccccccccccccc
Q 044428 72 PVE-----GP-FRNFSTESFSWNY 89 (457)
Q Consensus 72 p~~-----~~-~~~~~~~~~~~n~ 89 (457)
+.. .. ..++..+.+++|.
T Consensus 126 ~~~l~~~l~~~~~~L~~L~Ls~N~ 149 (362)
T 3goz_A 126 SSEFKQAFSNLPASITSLNLRGND 149 (362)
T ss_dssp HHHHHHHHTTSCTTCCEEECTTSC
T ss_pred HHHHHHHHHhCCCceeEEEccCCc
Confidence 521 11 1367778888774
No 405
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.97 E-value=5.8e-05 Score=71.63 Aligned_cols=137 Identities=14% Similarity=0.066 Sum_probs=91.6
Q ss_pred CCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcC---CCccceeeeeeecCCeeEEEEeccCCC
Q 044428 178 CNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVR---HRNLIKILSGCSNLDFKALVLEFMPNG 254 (457)
Q Consensus 178 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~g 254 (457)
.+.|+.|....+|+... +++.++||+.... ....+.+|.+.|+.+. ...+.++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 35789999999999986 4678889987543 3456888999888884 356778888888788899999999987
Q ss_pred CHH--------H---HHhhCCC---------------------CCCHHHH-----HHHHHH--------------HHHH-
Q 044428 255 SLE--------K---WLYSHNY---------------------FLDILER-----LNIMID--------------VGLA- 282 (457)
Q Consensus 255 ~L~--------~---~l~~~~~---------------------~l~~~~~-----~~i~~~--------------ia~~- 282 (457)
.+. + .||.... .-+|..- +.-..+ +...
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 642 1 2232210 1245432 111111 1111
Q ss_pred HHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccc
Q 044428 283 LEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFG 319 (457)
Q Consensus 283 l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 319 (457)
...|......+.++|+|+.+.|++++.++ +.|.||.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 12332222256799999999999999887 8899974
No 406
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.72 E-value=0.00017 Score=71.54 Aligned_cols=75 Identities=17% Similarity=0.137 Sum_probs=45.3
Q ss_pred CCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCcceeccccccccccCCCCCC-------CCccchhhhhHHHHH
Q 044428 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIV-------STKCDVYSYGILLLE 364 (457)
Q Consensus 292 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~Dv~s~Gvvl~e 364 (457)
...++|+|+++.||+++.++ +++.||+.+..-.+..+-.. ....-...|.+|+... ....++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGA-YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHH-HHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 46799999999999999876 99999998876322111000 0000012345544221 112445677778887
Q ss_pred HhcC
Q 044428 365 TFSR 368 (457)
Q Consensus 365 l~tg 368 (457)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 407
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.54 E-value=5.6e-06 Score=83.07 Aligned_cols=86 Identities=24% Similarity=0.180 Sum_probs=56.2
Q ss_pred cCCccCCeeeccCCcccccCCcccCC-----CCCCCeEeCcCCccCCC----CCccchhcCCCceEecccccCCCCCCCC
Q 044428 4 GGLKDLATLSLAANKFHGPIPKSFGS-----LISLESLDLSSNNLSGE----IPKSLEALLYLKQLNVSQNRLEGEIPVE 74 (457)
Q Consensus 4 ~~l~~L~~l~l~~N~l~g~~p~~~~~-----l~~l~~l~l~~n~l~g~----~p~~~~~~~~L~~l~l~~n~l~~~~p~~ 74 (457)
.++++|+.|+|++|++++.-+..+.. .++|+.|+|++|++++. +|..+..+++|+.|++++|++++..+..
T Consensus 281 ~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~ 360 (461)
T 1z7x_W 281 RAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRE 360 (461)
T ss_dssp HHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHH
T ss_pred hhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHH
Confidence 45778888888888887544443332 26788888888888765 5666677788888888888776543211
Q ss_pred ------CCccccccccccccc
Q 044428 75 ------GPFRNFSTESFSWNY 89 (457)
Q Consensus 75 ------~~~~~~~~~~~~~n~ 89 (457)
....++..+.+++|.
T Consensus 361 l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 361 LCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHcCCCCceEEEECCCCC
Confidence 013456666676663
No 408
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.52 E-value=9.2e-06 Score=81.47 Aligned_cols=84 Identities=15% Similarity=0.086 Sum_probs=66.1
Q ss_pred CccCCeeeccCCccccc----CCcccCCCCCCCeEeCcCCccCCCCCccchh-----cCCCceEecccccCCC----CCC
Q 044428 6 LKDLATLSLAANKFHGP----IPKSFGSLISLESLDLSSNNLSGEIPKSLEA-----LLYLKQLNVSQNRLEG----EIP 72 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g~----~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~-----~~~L~~l~l~~n~l~~----~~p 72 (457)
.++|+.|+|++|++++. +|..+.++++|++|+|++|++++..+..+.. .++|+.|++++|++++ .+|
T Consensus 312 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~ 391 (461)
T 1z7x_W 312 GCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLA 391 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHH
Confidence 46899999999999865 6777888899999999999998766666654 6789999999999985 444
Q ss_pred C-CCCccccccccccccc
Q 044428 73 V-EGPFRNFSTESFSWNY 89 (457)
Q Consensus 73 ~-~~~~~~~~~~~~~~n~ 89 (457)
. ...++++..+.+++|.
T Consensus 392 ~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 392 ATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHCCCCCEEECCSSS
T ss_pred HHHHhCCCccEEECCCCC
Confidence 2 2345677888888875
No 409
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.51 E-value=0.00059 Score=64.75 Aligned_cols=159 Identities=12% Similarity=0.092 Sum_probs=89.9
Q ss_pred ccCHHHHHHHhhcCCc-----CCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCc--ccee
Q 044428 162 RISYLDIQRATNEFDE-----CNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRN--LIKI 234 (457)
Q Consensus 162 ~~~~~~l~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l 234 (457)
.++..++......|.. .+.|+.|....+|+....+| .+++|+..... ....+..|..++..+.... +.++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 3556667666666654 23567788899999987666 58899887531 1234556777777764212 2333
Q ss_pred eee------eecCCeeEEEEeccCCCCHHH--------------HHhhC--C--CC-------CCHHHHHH---------
Q 044428 235 LSG------CSNLDFKALVLEFMPNGSLEK--------------WLYSH--N--YF-------LDILERLN--------- 274 (457)
Q Consensus 235 ~~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~~--~--~~-------l~~~~~~~--------- 274 (457)
+.. ....+..+++++|++|..+.. .+|.. . .. ..|...+.
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 122356789999998864311 12211 0 00 11322111
Q ss_pred ---HHHHHHHHHHHHHhcC---CCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 275 ---IMIDVGLALEYLHYGH---ALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 275 ---i~~~ia~~l~~LH~~~---~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
+...+...+++++... ....++|+|+.+.||+++++..+.|.||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 0112344555555321 135699999999999999876668999987653
No 410
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.47 E-value=0.001 Score=63.52 Aligned_cols=141 Identities=12% Similarity=0.024 Sum_probs=73.7
Q ss_pred CccCCCCceE-EEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCC--CccceeeeeeecCCeeEEEEeccCCCC
Q 044428 179 NLLGIGSFGS-VYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRH--RNLIKILSGCSNLDFKALVLEFMPNGS 255 (457)
Q Consensus 179 ~~lg~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~ 255 (457)
+.|+.|.... +|+....+|+.+++|....... ..+..|+.++..+.. -.+.+++.+....+ +++||++++..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3565565554 6677654467788876543221 234556777666632 23455666543333 78999998777
Q ss_pred HHHHHhhCC-------------------------CCCCHHHHH-------H-------------HHHHHHHHHHHHHh--
Q 044428 256 LEKWLYSHN-------------------------YFLDILERL-------N-------------IMIDVGLALEYLHY-- 288 (457)
Q Consensus 256 L~~~l~~~~-------------------------~~l~~~~~~-------~-------------i~~~ia~~l~~LH~-- 288 (457)
+.+++.... ...+..... . ....+...+..+..
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 765443211 001111000 0 00011122222211
Q ss_pred cCCCCCeeeccCCCCCeeecCC----CcEEEecccccccc
Q 044428 289 GHALAPIIHCDLKPSNILLDEN----MVAHVSDFGISKLL 324 (457)
Q Consensus 289 ~~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfg~~~~~ 324 (457)
......++|||+.+.||+++.+ ..+.|.||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1114579999999999999875 68899999988753
No 411
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.47 E-value=0.00047 Score=64.90 Aligned_cols=137 Identities=15% Similarity=0.149 Sum_probs=75.6
Q ss_pred CCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCCcc-ceeeeeeecCCeeEEEEecc-CCCC
Q 044428 178 CNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNL-IKILSGCSNLDFKALVLEFM-PNGS 255 (457)
Q Consensus 178 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~g~ 255 (457)
.+.|+.|....+|+. ..+++|+....... .....+|..+++.+....+ .+++++. .+..++++||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 568889999999999 55889987653221 1234568887777743233 3455443 33457899999 5544
Q ss_pred HHH------------------HHhhCCCC----CCHHHHHH-HHH--------------HHHHHH----HHHHhcCCCCC
Q 044428 256 LEK------------------WLYSHNYF----LDILERLN-IMI--------------DVGLAL----EYLHYGHALAP 294 (457)
Q Consensus 256 L~~------------------~l~~~~~~----l~~~~~~~-i~~--------------~ia~~l----~~LH~~~~~~~ 294 (457)
+.. .+|..... .+...++. +.. .+...+ ..+........
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 421 11111100 11111110 000 011111 11111122345
Q ss_pred eeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 295 IIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 295 ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
++|+|+.+.||+ .+++.+.+.||..+..
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 899999999999 5667789999998764
No 412
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.44 E-value=0.0015 Score=62.17 Aligned_cols=159 Identities=13% Similarity=0.054 Sum_probs=90.5
Q ss_pred cccCHHHHHHHhhcCCc-----CCccCCCCceEEEEEEeCCCCEEEEEEecccchhhHHHHHHHHHHHhhcCCC--ccce
Q 044428 161 RRISYLDIQRATNEFDE-----CNLLGIGSFGSVYKGTLSDGTNVAIKIFNLQLERTFVSFNSECEVLRNVRHR--NLIK 233 (457)
Q Consensus 161 ~~~~~~~l~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~--niv~ 233 (457)
..++..++......|.. ...++ |....||+....+|+.+++|+..... .....+..|..++..+... .+.+
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 34555666666555532 23466 88889999887778789999986331 1234566788887777422 2344
Q ss_pred eeee-----eecCCeeEEEEeccCCCCHH-----H------H---Hhh----CC----CCCCHHHH----HHH-------
Q 044428 234 ILSG-----CSNLDFKALVLEFMPNGSLE-----K------W---LYS----HN----YFLDILER----LNI------- 275 (457)
Q Consensus 234 l~~~-----~~~~~~~~lv~e~~~~g~L~-----~------~---l~~----~~----~~l~~~~~----~~i------- 275 (457)
++.. ....+..+++|+|++|..+. . . +|. .. ...++... ..+
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 4433 12234567899999875431 1 1 111 00 11222111 001
Q ss_pred --------HHHHHHHHHHHHhcC---CCCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 276 --------MIDVGLALEYLHYGH---ALAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 276 --------~~~ia~~l~~LH~~~---~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
...+...+..+.... ....++|+|+++.||+++ + .+.+.||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 111112233332211 135689999999999999 4 899999987764
No 413
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.43 E-value=2.2e-05 Score=76.57 Aligned_cols=85 Identities=18% Similarity=0.204 Sum_probs=64.0
Q ss_pred CCccCCeeeccCCcccc----cCCcccCCCCCCCeEeCcCCccCC----CCCccchhcCCCceEecccccCCCCCCC---
Q 044428 5 GLKDLATLSLAANKFHG----PIPKSFGSLISLESLDLSSNNLSG----EIPKSLEALLYLKQLNVSQNRLEGEIPV--- 73 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~g----~~p~~~~~l~~l~~l~l~~n~l~g----~~p~~~~~~~~L~~l~l~~n~l~~~~p~--- 73 (457)
..++|+.|+|++|+|+. .++..+..+++|++|+|++|+|++ .++..+...++|+.|+|++|.++..-..
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 46789999999999974 356666788999999999999884 2356677788999999999998753210
Q ss_pred --CCCccccccccccccc
Q 044428 74 --EGPFRNFSTESFSWNY 89 (457)
Q Consensus 74 --~~~~~~~~~~~~~~n~ 89 (457)
....+++..+.+++|.
T Consensus 233 ~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNE 250 (372)
T ss_dssp HHHHHCSSCCEEECTTSS
T ss_pred HHHHhCCCCCEEeccCCC
Confidence 1123567788888885
No 414
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.32 E-value=0.0004 Score=68.98 Aligned_cols=71 Identities=17% Similarity=0.236 Sum_probs=48.7
Q ss_pred CccCCCCceEEEEEEeCC--------CCEEEEEEecccchhhHHHHHHHHHHHhhcCCCcc-ceeeeeeecCCeeEEEEe
Q 044428 179 NLLGIGSFGSVYKGTLSD--------GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNL-IKILSGCSNLDFKALVLE 249 (457)
Q Consensus 179 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e 249 (457)
+.|+.|....+|+....+ +..+++|+.... .....+.+|..++..+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 468889899999998753 578999988432 111345578888888853333 556666543 38999
Q ss_pred ccCCCC
Q 044428 250 FMPNGS 255 (457)
Q Consensus 250 ~~~~g~ 255 (457)
|++|.+
T Consensus 153 ~l~G~~ 158 (429)
T 1nw1_A 153 YIPSRP 158 (429)
T ss_dssp CCCEEE
T ss_pred EeCCcc
Confidence 998633
No 415
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.29 E-value=4.5e-05 Score=79.02 Aligned_cols=85 Identities=11% Similarity=-0.009 Sum_probs=47.8
Q ss_pred CCccCCeeeccC--CcccccCCcccCC-CCCCCeEeCcCCccCC-CCCccchhcCCCceEecccccCCCC-CCC-CCCcc
Q 044428 5 GLKDLATLSLAA--NKFHGPIPKSFGS-LISLESLDLSSNNLSG-EIPKSLEALLYLKQLNVSQNRLEGE-IPV-EGPFR 78 (457)
Q Consensus 5 ~l~~L~~l~l~~--N~l~g~~p~~~~~-l~~l~~l~l~~n~l~g-~~p~~~~~~~~L~~l~l~~n~l~~~-~p~-~~~~~ 78 (457)
++++|+.|+|+. |.+++..+..++. +++|++|+|++|++++ .+|..+..+++|+.|+|++|++++. ++. ...++
T Consensus 434 ~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~ 513 (592)
T 3ogk_B 434 GCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLP 513 (592)
T ss_dssp HCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCS
T ss_pred hCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcC
Confidence 466677777653 3355555544443 6667777777776665 3444445566677777777766432 111 12344
Q ss_pred ccccccccccc
Q 044428 79 NFSTESFSWNY 89 (457)
Q Consensus 79 ~~~~~~~~~n~ 89 (457)
++..+.+++|.
T Consensus 514 ~L~~L~ls~n~ 524 (592)
T 3ogk_B 514 SLRYLWVQGYR 524 (592)
T ss_dssp SCCEEEEESCB
T ss_pred ccCeeECcCCc
Confidence 55666666654
No 416
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.27 E-value=0.00049 Score=56.17 Aligned_cols=56 Identities=23% Similarity=0.411 Sum_probs=44.9
Q ss_pred CeeeccCCccc-ccCCcccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccccCC
Q 044428 10 ATLSLAANKFH-GPIPKSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQNRLE 68 (457)
Q Consensus 10 ~~l~l~~N~l~-g~~p~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n~l~ 68 (457)
..++.+++.|+ ..+|..+. ++|+.|+|++|+|+ .||. .|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 47889999997 56887643 57999999999999 6766 4677889999999888765
No 417
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.21 E-value=0.002 Score=62.73 Aligned_cols=140 Identities=13% Similarity=0.122 Sum_probs=82.1
Q ss_pred CccCCCCceEEEEEEeC--------CCCEEEEEEecccchhhHHHHHHHHHHHhhcC-CCccceeeeeeecCCeeEEEEe
Q 044428 179 NLLGIGSFGSVYKGTLS--------DGTNVAIKIFNLQLERTFVSFNSECEVLRNVR-HRNLIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 179 ~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 249 (457)
+.+..|-...+|+.... +++.+++|+..... .....+.+|..+++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 46777888999999875 35789999864322 23455678999998884 3333556666654 29999
Q ss_pred ccCCCCHHH-----------------HHhhCC----CCCC--HHHHHHHHHHHH-------------------HHHHH--
Q 044428 250 FMPNGSLEK-----------------WLYSHN----YFLD--ILERLNIMIDVG-------------------LALEY-- 285 (457)
Q Consensus 250 ~~~~g~L~~-----------------~l~~~~----~~l~--~~~~~~i~~~ia-------------------~~l~~-- 285 (457)
|++|.+|.. -+|... .... |.+..++..++. ..+.+
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998755421 112221 1122 233333333221 12233
Q ss_pred --HHhcCCCCCeeeccCCCCCeeecCC----CcEEEeccccccc
Q 044428 286 --LHYGHALAPIIHCDLKPSNILLDEN----MVAHVSDFGISKL 323 (457)
Q Consensus 286 --LH~~~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfg~~~~ 323 (457)
|........++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 3222224569999999999999876 7899999998764
No 418
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.15 E-value=6.9e-05 Score=73.08 Aligned_cols=84 Identities=18% Similarity=0.167 Sum_probs=61.5
Q ss_pred CccCCeeeccCCcccccCCccc-----CCCCCCCeEeCcCCccCC----CCCccchhcCCCceEecccccCCCCC----C
Q 044428 6 LKDLATLSLAANKFHGPIPKSF-----GSLISLESLDLSSNNLSG----EIPKSLEALLYLKQLNVSQNRLEGEI----P 72 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g~~p~~~-----~~l~~l~~l~l~~n~l~g----~~p~~~~~~~~L~~l~l~~n~l~~~~----p 72 (457)
+++|+.|+|++|+|+..-...+ ...++|++|+|++|+|+. .++..+..+++|+.|+|++|+++..- +
T Consensus 125 L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~ 204 (372)
T 3un9_A 125 FLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA 204 (372)
T ss_dssp HHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH
T ss_pred HHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH
Confidence 5689999999999975433333 346889999999999974 35556677899999999999987421 1
Q ss_pred -CCCCccccccccccccc
Q 044428 73 -VEGPFRNFSTESFSWNY 89 (457)
Q Consensus 73 -~~~~~~~~~~~~~~~n~ 89 (457)
......++..+.+++|.
T Consensus 205 ~~L~~~~~L~~L~Ls~N~ 222 (372)
T 3un9_A 205 AQLDRNRQLQELNVAYNG 222 (372)
T ss_dssp HHGGGCSCCCEEECCSSC
T ss_pred HHHhcCCCcCeEECCCCC
Confidence 11223467788888874
No 419
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.13 E-value=3.1e-05 Score=80.23 Aligned_cols=81 Identities=12% Similarity=0.077 Sum_probs=56.0
Q ss_pred CCccCCeeeccCCccccc----CCcccCCCCCCCeEeCcCCccC----CCCCccchhcCCCceEecccccCCCCCCCCCC
Q 044428 5 GLKDLATLSLAANKFHGP----IPKSFGSLISLESLDLSSNNLS----GEIPKSLEALLYLKQLNVSQNRLEGEIPVEGP 76 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~g~----~p~~~~~l~~l~~l~l~~n~l~----g~~p~~~~~~~~L~~l~l~~n~l~~~~p~~~~ 76 (457)
+|++|+.|+|++|.+++. ++..+.++++|++|+|++|+++ +.++..+.++++|+.|++++|.+.+.......
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~ 241 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKA 241 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhh
Confidence 578888888988888765 4445567888888888888887 34555566788888888888887764332223
Q ss_pred ccccccccc
Q 044428 77 FRNFSTESF 85 (457)
Q Consensus 77 ~~~~~~~~~ 85 (457)
++++..+.+
T Consensus 242 ~~~L~~L~l 250 (592)
T 3ogk_B 242 AANLEEFCG 250 (592)
T ss_dssp CTTCCEEEE
T ss_pred hhHHHhhcc
Confidence 334444443
No 420
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.04 E-value=9.2e-05 Score=71.82 Aligned_cols=85 Identities=16% Similarity=0.245 Sum_probs=58.5
Q ss_pred CCccCCeeeccC--Cccccc-----CCccc--CCCCCCCeEeCcCCccCCCCCccch---hcCCCceEecccccCCCC--
Q 044428 5 GLKDLATLSLAA--NKFHGP-----IPKSF--GSLISLESLDLSSNNLSGEIPKSLE---ALLYLKQLNVSQNRLEGE-- 70 (457)
Q Consensus 5 ~l~~L~~l~l~~--N~l~g~-----~p~~~--~~l~~l~~l~l~~n~l~g~~p~~~~---~~~~L~~l~l~~n~l~~~-- 70 (457)
.+++|+.|+|+. |...|. +-..+ +.+++|++|+|++|.+++..+..+. .+++|+.|+|+.|.+++.
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~ 296 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGA 296 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHH
Confidence 689999999863 333222 11122 3589999999999999865555554 478999999999999763
Q ss_pred --CCCC-CCccccccccccccc
Q 044428 71 --IPVE-GPFRNFSTESFSWNY 89 (457)
Q Consensus 71 --~p~~-~~~~~~~~~~~~~n~ 89 (457)
++.. ..++++..+.++.|.
T Consensus 297 ~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 297 RLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp HHHHTTHHHHTTCSEEECCSBB
T ss_pred HHHHhhcccCCcceEEECCCCc
Confidence 2221 245677777777663
No 421
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.02 E-value=0.00088 Score=65.01 Aligned_cols=72 Identities=15% Similarity=0.245 Sum_probs=44.2
Q ss_pred CccCCCCceEEEEEEeCC---------CCEEEEEEecccchhhHHHHHHHHHHHhhcCCCc-cceeeeeeecCCeeEEEE
Q 044428 179 NLLGIGSFGSVYKGTLSD---------GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRN-LIKILSGCSNLDFKALVL 248 (457)
Q Consensus 179 ~~lg~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 248 (457)
..++.|....+|+....+ ++.+++|+...... ...+...|.+++..+.... ..++++... ..+||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 367788889999998754 26889998764322 1123467888888875333 335665432 36899
Q ss_pred eccCCCC
Q 044428 249 EFMPNGS 255 (457)
Q Consensus 249 e~~~~g~ 255 (457)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 422
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.99 E-value=0.00016 Score=63.01 Aligned_cols=67 Identities=18% Similarity=0.234 Sum_probs=53.0
Q ss_pred ccCCccCCeeeccCC-ccccc----CCcccCCCCCCCeEeCcCCccCC----CCCccchhcCCCceEecccccCCC
Q 044428 3 IGGLKDLATLSLAAN-KFHGP----IPKSFGSLISLESLDLSSNNLSG----EIPKSLEALLYLKQLNVSQNRLEG 69 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N-~l~g~----~p~~~~~l~~l~~l~l~~n~l~g----~~p~~~~~~~~L~~l~l~~n~l~~ 69 (457)
+...++|+.|+|++| .|+.. +...+...++|++|+|++|+|+. .+...+...++|+.|+|++|.++.
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 456789999999999 88632 45567778999999999999974 244456666899999999999874
No 423
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.98 E-value=0.00014 Score=63.31 Aligned_cols=67 Identities=19% Similarity=0.304 Sum_probs=54.3
Q ss_pred ccCCccCCeeeccCCccccc----CCcccCCCCCCCeEeCcCCccCCC----CCccchhcCCCceEec--ccccCCC
Q 044428 3 IGGLKDLATLSLAANKFHGP----IPKSFGSLISLESLDLSSNNLSGE----IPKSLEALLYLKQLNV--SQNRLEG 69 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~----~p~~~~~l~~l~~l~l~~n~l~g~----~p~~~~~~~~L~~l~l--~~n~l~~ 69 (457)
+...++|++|+|++|+|+.. +...+...++|++|+|++|+|+.. +...+...++|+.|+| ++|.++.
T Consensus 61 L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 61 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 45578999999999999632 445566678999999999999853 5667777889999999 8898874
No 424
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.98 E-value=0.0016 Score=65.14 Aligned_cols=73 Identities=15% Similarity=0.186 Sum_probs=47.9
Q ss_pred CccCCCCceEEEEEEeCC-CCEEEEEEecccchhhHHHHHHHHHHHhhcCCCcc-ceeeeeeecCCeeEEEEeccCCCCH
Q 044428 179 NLLGIGSFGSVYKGTLSD-GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRNL-IKILSGCSNLDFKALVLEFMPNGSL 256 (457)
Q Consensus 179 ~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~L 256 (457)
+.|+.|-...+|+....+ +..+++|+...... ...+..+|..++..+...++ .++++++. + .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 468889999999998865 57888998754321 11223578999998865555 45666663 2 259999987443
No 425
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.77 E-value=7.7e-05 Score=77.23 Aligned_cols=41 Identities=17% Similarity=0.129 Sum_probs=20.1
Q ss_pred cCCCCCCCeEeCcCCccCCCCCccchh-cCCCceEecccccCC
Q 044428 27 FGSLISLESLDLSSNNLSGEIPKSLEA-LLYLKQLNVSQNRLE 68 (457)
Q Consensus 27 ~~~l~~l~~l~l~~n~l~g~~p~~~~~-~~~L~~l~l~~n~l~ 68 (457)
+.++++|+.|+|++ ++++..+..+.. +++|+.|+|++|.++
T Consensus 428 ~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~ 469 (594)
T 2p1m_B 428 VEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDS 469 (594)
T ss_dssp HHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSS
T ss_pred HhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCc
Confidence 34455555555544 444433334443 455555555555543
No 426
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.73 E-value=0.012 Score=51.82 Aligned_cols=100 Identities=12% Similarity=-0.033 Sum_probs=66.9
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEeccccccccCCCCCccee
Q 044428 254 GSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSLIQ 333 (457)
Q Consensus 254 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 333 (457)
-+|.+.|...+.++++.+.+.++.|.+.+|.-+-... .+ ..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRR-QP--RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT-CC--CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcc-cC--CceecCCcceEEecCCceeccc-cccc-----------
Confidence 4899999998889999999999999999987762111 11 1223456899999999888764 1110
Q ss_pred ccccccccccCCCCCC---CCccchhhhhHHHHHHhcCCCC
Q 044428 334 TKTMATIGYMAPEGIV---STKCDVYSYGILLLETFSRKKP 371 (457)
Q Consensus 334 ~~~~gt~~y~aPE~~~---~~~~Dv~s~Gvvl~el~tg~~p 371 (457)
.....+.|||... +++.=|||+|+++|.-+--..|
T Consensus 98 ---~~~~~~~~pe~~~~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGYSQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSSSSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhccccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1122456888543 6788899999999998874444
No 427
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.67 E-value=0.0095 Score=56.98 Aligned_cols=32 Identities=19% Similarity=0.305 Sum_probs=28.1
Q ss_pred CCCeeeccCCCCCeeecCCCcEEEeccccccc
Q 044428 292 LAPIIHCDLKPSNILLDENMVAHVSDFGISKL 323 (457)
Q Consensus 292 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 323 (457)
...++|+|+.+.||++++++.+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35699999999999999888899999987764
No 428
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=96.47 E-value=0.0026 Score=60.58 Aligned_cols=79 Identities=16% Similarity=0.140 Sum_probs=60.8
Q ss_pred CccCCeeeccCCcccccCCc-ccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCc-eEecccccCCCCCCC-CCCccccc
Q 044428 6 LKDLATLSLAANKFHGPIPK-SFGSLISLESLDLSSNNLSGEIPK-SLEALLYLK-QLNVSQNRLEGEIPV-EGPFRNFS 81 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~-~l~l~~n~l~~~~p~-~~~~~~~~ 81 (457)
|++|+.|+|++|+++ .||+ .|.+|++|+.|+|++| ++ .|+. .|.++.+|+ .+++++ +++...+. ...+.++.
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~ 300 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLR 300 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEE
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCC
Confidence 789999999999999 6774 6999999999999998 87 6665 688999999 999988 56544332 22334566
Q ss_pred ccccccc
Q 044428 82 TESFSWN 88 (457)
Q Consensus 82 ~~~~~~n 88 (457)
.+.+.+|
T Consensus 301 ~l~l~~n 307 (329)
T 3sb4_A 301 YVLATGD 307 (329)
T ss_dssp EEEECSS
T ss_pred EEEeCCC
Confidence 6666554
No 429
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.44 E-value=0.0053 Score=60.01 Aligned_cols=141 Identities=18% Similarity=0.158 Sum_probs=82.3
Q ss_pred CccCCCCceEEEEEEeCC--------CCEEEEEEecccchh------------------hHHHHHHHHHHHhhcC-CCcc
Q 044428 179 NLLGIGSFGSVYKGTLSD--------GTNVAIKIFNLQLER------------------TFVSFNSECEVLRNVR-HRNL 231 (457)
Q Consensus 179 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~------------------~~~~~~~E~~~l~~l~-h~ni 231 (457)
+.|..|-...+|+....+ +..|.+++.-...+. .......|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 356678889999998754 367899987543221 0012234888888885 4334
Q ss_pred ceeeeeeecCCeeEEEEeccCCCCHHH-----------------HHhhCC----CCCCHH--HHHHHHHHHH--------
Q 044428 232 IKILSGCSNLDFKALVLEFMPNGSLEK-----------------WLYSHN----YFLDIL--ERLNIMIDVG-------- 280 (457)
Q Consensus 232 v~l~~~~~~~~~~~lv~e~~~~g~L~~-----------------~l~~~~----~~l~~~--~~~~i~~~ia-------- 280 (457)
.++++++.+. +|+||+++-+|.. -+|... ....|. ...++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677766432 8999998644311 112221 112222 2222322211
Q ss_pred --------------HHH----HHHHhcCCCCCeeeccCCCCCeeecCC------CcEEEeccccccc
Q 044428 281 --------------LAL----EYLHYGHALAPIIHCDLKPSNILLDEN------MVAHVSDFGISKL 323 (457)
Q Consensus 281 --------------~~l----~~LH~~~~~~~ivH~dlk~~NIll~~~------~~~kl~Dfg~~~~ 323 (457)
.-+ .+|........++|+|+.+.||+++++ +.+.+.||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 233332224568999999999999877 7899999987764
No 430
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.34 E-value=0.00044 Score=71.43 Aligned_cols=84 Identities=14% Similarity=0.119 Sum_probs=58.4
Q ss_pred CCccCCeeeccCCcccccCCcccC-CCCCCCeEeCcCC-ccCCC-CCccchhcCCCceEecccccCCCCCCCC-----CC
Q 044428 5 GLKDLATLSLAANKFHGPIPKSFG-SLISLESLDLSSN-NLSGE-IPKSLEALLYLKQLNVSQNRLEGEIPVE-----GP 76 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~g~~p~~~~-~l~~l~~l~l~~n-~l~g~-~p~~~~~~~~L~~l~l~~n~l~~~~p~~-----~~ 76 (457)
.+++|+.|+|++|.+++..+..+. ++++|++|+|++| .++.. ++..+.++++|+.|+|++|.+++..+.. ..
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 467888888888888877777775 6888888888888 55532 4555557888888888888876643221 13
Q ss_pred cccccccccccc
Q 044428 77 FRNFSTESFSWN 88 (457)
Q Consensus 77 ~~~~~~~~~~~n 88 (457)
++++..+.+++|
T Consensus 183 ~~~L~~L~l~~~ 194 (594)
T 2p1m_B 183 YTSLVSLNISCL 194 (594)
T ss_dssp CCCCCEEECTTC
T ss_pred CCcCcEEEeccc
Confidence 446666666655
No 431
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=96.29 E-value=0.0042 Score=59.09 Aligned_cols=64 Identities=17% Similarity=0.251 Sum_probs=37.3
Q ss_pred ccCCccCCeeeccCCcccccCC-cccCCCCCCC-eEeCcCCccCCCCC-ccchhcCCCceEecccccCCCC
Q 044428 3 IGGLKDLATLSLAANKFHGPIP-KSFGSLISLE-SLDLSSNNLSGEIP-KSLEALLYLKQLNVSQNRLEGE 70 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p-~~~~~l~~l~-~l~l~~n~l~g~~p-~~~~~~~~L~~l~l~~n~l~~~ 70 (457)
|.+|++|+.|+|.+| ++ .|+ ..|.+|++|+ .|+|++ +++ .|+ ..|.+|++|+.+++++|++...
T Consensus 246 F~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 246 FAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp TTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred hhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEEEeCCCccCcc
Confidence 455666666666665 55 344 3466666666 666666 555 343 4566666666666666665544
No 432
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.08 E-value=0.0066 Score=59.90 Aligned_cols=73 Identities=15% Similarity=0.281 Sum_probs=48.6
Q ss_pred CccCCCCceEEEEEEeCC--------CCEEEEEEecccchhhHHHHHHHHHHHhhcCCCc-cceeeeeeecCCeeEEEEe
Q 044428 179 NLLGIGSFGSVYKGTLSD--------GTNVAIKIFNLQLERTFVSFNSECEVLRNVRHRN-LIKILSGCSNLDFKALVLE 249 (457)
Q Consensus 179 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e 249 (457)
+.+..|-...+|+....+ +..+++|+..... ....+..+|..+++.+.-.. ..++++.+. .++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 467778899999998763 5789999875432 22223467888888874323 344555432 378999
Q ss_pred ccCCCCH
Q 044428 250 FMPNGSL 256 (457)
Q Consensus 250 ~~~~g~L 256 (457)
|++|.+|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998653
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.84 E-value=0.0067 Score=49.28 Aligned_cols=36 Identities=25% Similarity=0.414 Sum_probs=32.2
Q ss_pred cCCeeeccCCcccccCCc-ccCCCCCCCeEeCcCCccC
Q 044428 8 DLATLSLAANKFHGPIPK-SFGSLISLESLDLSSNNLS 44 (457)
Q Consensus 8 ~L~~l~l~~N~l~g~~p~-~~~~l~~l~~l~l~~n~l~ 44 (457)
+|+.|+|++|+|+ .||. .|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 7999999999999 6764 5788999999999999875
No 434
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.50 E-value=0.0024 Score=61.82 Aligned_cols=84 Identities=14% Similarity=0.145 Sum_probs=57.4
Q ss_pred CccCCeeeccCCcccccCCcccC--CCCCCCeEeCcC--CccCCC-----CCccc--hhcCCCceEecccccCCCCCC--
Q 044428 6 LKDLATLSLAANKFHGPIPKSFG--SLISLESLDLSS--NNLSGE-----IPKSL--EALLYLKQLNVSQNRLEGEIP-- 72 (457)
Q Consensus 6 l~~L~~l~l~~N~l~g~~p~~~~--~l~~l~~l~l~~--n~l~g~-----~p~~~--~~~~~L~~l~l~~n~l~~~~p-- 72 (457)
+++|+.|+|..|.++...-..++ ++++|+.|+|+. |...|. +-..+ ..+++|+.|+|++|.+.+..+
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 78999999999888754434444 799999999863 332222 11122 347899999999999875332
Q ss_pred --CCCCccccccccccccc
Q 044428 73 --VEGPFRNFSTESFSWNY 89 (457)
Q Consensus 73 --~~~~~~~~~~~~~~~n~ 89 (457)
..+.++++..+.++.|.
T Consensus 272 la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGV 290 (362)
T ss_dssp HHHCSSGGGCSEEECCSSC
T ss_pred HHhCccCCCCCEEECCCCC
Confidence 11346778888887764
No 435
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=94.53 E-value=0.043 Score=53.72 Aligned_cols=62 Identities=15% Similarity=0.180 Sum_probs=39.4
Q ss_pred CccCCccCCeeeccCCccc----ccCC-cccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccc
Q 044428 2 TIGGLKDLATLSLAANKFH----GPIP-KSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQN 65 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~----g~~p-~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n 65 (457)
+|.+|++|+.++|.+|.+. ..|+ ..|..|++|+.++|+ |+++ .|+. .|.+|.+|+.+.|.+|
T Consensus 266 aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 266 AFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp TTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT
T ss_pred HhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc
Confidence 3556777777777776664 1133 456777777777777 4466 5544 5666777777777554
No 436
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=94.02 E-value=0.007 Score=51.80 Aligned_cols=81 Identities=12% Similarity=0.087 Sum_probs=54.2
Q ss_pred cCCeeeccCCcccccCCcccCCCCCCCeEeCcCCc-cCCCCCccchhc----CCCceEeccccc-CCCC-CCCCCCcccc
Q 044428 8 DLATLSLAANKFHGPIPKSFGSLISLESLDLSSNN-LSGEIPKSLEAL----LYLKQLNVSQNR-LEGE-IPVEGPFRNF 80 (457)
Q Consensus 8 ~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~-l~g~~p~~~~~~----~~L~~l~l~~n~-l~~~-~p~~~~~~~~ 80 (457)
+|+.||||++.++-.=-..+..|++|++|+|+++. ++..=-..++.+ ++|+.|+|+++. ++.. +.....++++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 58999999999874333457889999999999985 774332334443 479999999984 6521 1111235566
Q ss_pred cccccccc
Q 044428 81 STESFSWN 88 (457)
Q Consensus 81 ~~~~~~~n 88 (457)
..+.+++-
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666553
No 437
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=93.71 E-value=0.014 Score=50.00 Aligned_cols=47 Identities=13% Similarity=0.263 Sum_probs=33.4
Q ss_pred cCCcccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEeccccc-CC
Q 044428 22 PIPKSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQNR-LE 68 (457)
Q Consensus 22 ~~p~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n~-l~ 68 (457)
.+|...-.-.+|+.||||++.++..=-..+..+++|+.|+|+++. ++
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~It 99 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIE 99 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCC
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccC
Confidence 345544333578999999988875434456788899999999885 54
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.53 E-value=0.023 Score=49.58 Aligned_cols=65 Identities=18% Similarity=0.222 Sum_probs=48.8
Q ss_pred CCccCCeeeccCC-cccc----cCCcccCCCCCCCeEeCcCCccCC----CCCccchhcCCCceEecccccCCC
Q 044428 5 GLKDLATLSLAAN-KFHG----PIPKSFGSLISLESLDLSSNNLSG----EIPKSLEALLYLKQLNVSQNRLEG 69 (457)
Q Consensus 5 ~l~~L~~l~l~~N-~l~g----~~p~~~~~l~~l~~l~l~~n~l~g----~~p~~~~~~~~L~~l~l~~n~l~~ 69 (457)
+-+.|+.|+|++| +|.- .|-..+..-+.|+.|+|++|+|.. .|-..+..-+.|+.|+|++|+|..
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 4468999999986 7742 133456667899999999999983 233345556899999999999974
No 439
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=93.26 E-value=0.081 Score=51.70 Aligned_cols=59 Identities=12% Similarity=0.190 Sum_probs=39.5
Q ss_pred ccCCccCCeeeccCCcccccCC-cccCCCCCCCeEeCcCCccCCCCCccchhcCCCceEecccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIP-KSFGSLISLESLDLSSNNLSGEIPKSLEALLYLKQLNVSQN 65 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p-~~~~~l~~l~~l~l~~n~l~g~~p~~~~~~~~L~~l~l~~n 65 (457)
+.++ +|+.+.|.+ .++ .|+ ..|.+|++|+.++|++|+++ .||.....+.+|+.+.|.+|
T Consensus 154 F~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~ 213 (401)
T 4fdw_A 154 FFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT 213 (401)
T ss_dssp TTTC-CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT
T ss_pred cCCC-CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc
Confidence 3443 577777765 565 344 56777778888888777777 67765555677777777644
No 440
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.06 E-value=0.054 Score=52.95 Aligned_cols=30 Identities=33% Similarity=0.389 Sum_probs=25.2
Q ss_pred CeeeccCCCCCeee------cCCCcEEEeccccccc
Q 044428 294 PIIHCDLKPSNILL------DENMVAHVSDFGISKL 323 (457)
Q Consensus 294 ~ivH~dlk~~NIll------~~~~~~kl~Dfg~~~~ 323 (457)
.++|+|+.+.||++ +++..+.+.||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567799999998764
No 441
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=91.35 E-value=0.24 Score=31.20 Aligned_cols=27 Identities=15% Similarity=0.325 Sum_probs=11.8
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhcCCC
Q 044428 120 YILPPIISIMLLLIAIIVYVRCQNRST 146 (457)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (457)
.++++++++++++++.++|+|++++++
T Consensus 15 gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 15 GVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred eehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 334444444444444444444444433
No 442
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.84 E-value=0.22 Score=31.48 Aligned_cols=20 Identities=10% Similarity=0.426 Sum_probs=7.6
Q ss_pred hHHHHHHHHHHHHHHhhhhh
Q 044428 123 PPIISIMLLLIAIIVYVRCQ 142 (457)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~ 142 (457)
+++++++++++++++|++++
T Consensus 19 gGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 19 GALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhhhh
Confidence 33333333333333344433
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=89.90 E-value=0.3 Score=47.37 Aligned_cols=59 Identities=27% Similarity=0.319 Sum_probs=44.5
Q ss_pred ccCCccCCeeeccCCcccccCC-cccCCCCCCCeEeCcCCccCCCCC-ccchhcCCCceEecccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIP-KSFGSLISLESLDLSSNNLSGEIP-KSLEALLYLKQLNVSQN 65 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p-~~~~~l~~l~~l~l~~n~l~g~~p-~~~~~~~~L~~l~l~~n 65 (457)
+.++.+|+.+.+.+| ++ .|+ ..|.++++|+.++|.++ ++ .|+ ..|.+|.+|+.+++..|
T Consensus 293 F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 293 FYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred ccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 557888888888765 65 455 56888899999998754 66 665 46788889999888766
No 444
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=89.88 E-value=0.53 Score=29.60 Aligned_cols=21 Identities=10% Similarity=0.335 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHhhhhhcCC
Q 044428 125 IISIMLLLIAIIVYVRCQNRS 145 (457)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~ 145 (457)
++.++++.+.+++|+++++.+
T Consensus 21 vll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 21 ILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHhheehhhhh
Confidence 333333444444455544443
No 445
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=89.59 E-value=0.29 Score=47.00 Aligned_cols=60 Identities=12% Similarity=0.208 Sum_probs=43.8
Q ss_pred ccCCccCCeeeccCCcccccCC-cccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIP-KSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQN 65 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p-~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n 65 (457)
+.++.+|+.+.+..+ ++ .++ ..|..+++|+.+.+.+|.++ .|+. .|.++.+|+.+.|..+
T Consensus 259 F~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 259 LQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp TTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT
T ss_pred cceeehhcccccccc-ce-eccccccccccccccccccccccc-eehhhhhcCCCCCCEEEcCcc
Confidence 456777888877654 55 455 45778888888888888887 6654 6778888888888654
No 446
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=89.34 E-value=0.065 Score=46.65 Aligned_cols=61 Identities=20% Similarity=0.227 Sum_probs=44.4
Q ss_pred CCccCCeeeccCCccccc----CCcccCCCCCCCeEeCcCCccCCC----CCccchhcCCCceEecccc
Q 044428 5 GLKDLATLSLAANKFHGP----IPKSFGSLISLESLDLSSNNLSGE----IPKSLEALLYLKQLNVSQN 65 (457)
Q Consensus 5 ~l~~L~~l~l~~N~l~g~----~p~~~~~l~~l~~l~l~~n~l~g~----~p~~~~~~~~L~~l~l~~n 65 (457)
.-+.|+.|+|++|+|.-. |-..+..-+.|++|+|++|+|+.. |-..+..-..|+.|+|++|
T Consensus 68 ~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 68 NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 346899999999999721 233444568899999999999842 2223444567999999876
No 447
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=89.02 E-value=0.51 Score=45.63 Aligned_cols=82 Identities=16% Similarity=0.319 Sum_probs=53.5
Q ss_pred CccCCccCCeeeccCCcccccCC-cccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccccCCCCCCC--CCCc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIP-KSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQNRLEGEIPV--EGPF 77 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p-~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n~l~~~~p~--~~~~ 77 (457)
.+.++++|+.+.+. +.++ .|+ ..|.+|++|+.++|..| ++ .|.. .|.+|.+|+.+.+..+ ++. +.. ....
T Consensus 283 aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~~-I~~~aF~~C 356 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VTK-IPESAFSNC 356 (394)
T ss_dssp TTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CCB-CCGGGGTTC
T ss_pred ccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cCE-EhHhHhhCC
Confidence 35678888888886 4566 565 46888899999998765 66 5544 6788888998888654 332 221 1223
Q ss_pred cccccccccccc
Q 044428 78 RNFSTESFSWNY 89 (457)
Q Consensus 78 ~~~~~~~~~~n~ 89 (457)
.++..+.+.++.
T Consensus 357 ~~L~~i~~~~~~ 368 (394)
T 4gt6_A 357 TALNNIEYSGSR 368 (394)
T ss_dssp TTCCEEEESSCH
T ss_pred CCCCEEEECCce
Confidence 445555665553
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=87.61 E-value=1.3 Score=38.76 Aligned_cols=117 Identities=13% Similarity=0.100 Sum_probs=78.6
Q ss_pred CCCccceeeeeeecCCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCeeeccCCCCCee
Q 044428 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALEYLHYGHALAPIIHCDLKPSNIL 306 (457)
Q Consensus 227 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~~ivH~dlk~~NIl 306 (457)
.||+.++. ..-...+...+.|+.-+.+.=+..+. ..+...+++++..|+....+++ . -+|--+.|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik----~~~~~eKlr~l~ni~~l~~~~~----~--r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK----SFTKNEKLRYLLNIKNLEEVNR----T--RYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG----GSCHHHHHHHHHHGGGGGGGGG----S--SEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH----hcCHHHHHHHHHHHHHHHHHhc----C--ceEEEEecceEE
Confidence 57777765 44555666666666543222222232 2678899999999998876665 2 378899999999
Q ss_pred ecCCCcEEEeccccccccCCCCCcceeccccccccccCCCCCCCCccchhhhhHHHHHHhcCCCCCCC
Q 044428 307 LDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTND 374 (457)
Q Consensus 307 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~Dv~s~Gvvl~el~tg~~p~~~ 374 (457)
++.++.+++.-.|+...+.+.. .++..=.-.+=+++..+++++..|+.
T Consensus 112 f~~~~~p~i~~RGik~~l~P~~--------------------~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVVDPLP--------------------VSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp ECTTSCEEESCCEETTTBSCCC--------------------CCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EcCCCCEEEEEccCccCCCCCC--------------------CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999888755442211 11222234567788999999888754
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=85.46 E-value=2.4 Score=37.19 Aligned_cols=115 Identities=10% Similarity=0.035 Sum_probs=77.1
Q ss_pred CCCccceeeeeeecCCeeEEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCCeeeccCCCCCe
Q 044428 227 RHRNLIKILSGCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGLALE-YLHYGHALAPIIHCDLKPSNI 305 (457)
Q Consensus 227 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~~ivH~dlk~~NI 305 (457)
.||+. -...-.+.+...+.|+.-+++.=+..+.. .+...+++++.+++.... +++ .-+|--+.|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~----~~~~eKlrll~nl~~L~~~~~~------~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK----TTLLSRIRAAIHLVSKVKHHSA------RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT----SCHHHHHHHHHHHHHHHSSCCS------SSEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh----cCHHHHHHHHHHHHHHHHHhhh------CceeEEEeCceE
Confidence 57776 33334666777777776545433444432 678899999999887766 454 247888999999
Q ss_pred eecCCCcEEEeccccccccCCCCCcceeccccccccccCCCCCCCCccchhhhhHHHHHHhcCCCCCC
Q 044428 306 LLDENMVAHVSDFGISKLLGEGDDSLIQTKTMATIGYMAPEGIVSTKCDVYSYGILLLETFSRKKPTN 373 (457)
Q Consensus 306 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~Dv~s~Gvvl~el~tg~~p~~ 373 (457)
+++.++.+++.-.|+-..+ +|.. .++.-=.-.+=+++..++.++..|+
T Consensus 116 ~f~~~~~p~i~hRGi~~~l-------------------pP~e-~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL-------------------PPDE-WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETTTB-------------------SSCS-CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCcccC-------------------CCCC-CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999988875543 2321 1111123356678888888877664
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=84.99 E-value=0.12 Score=51.45 Aligned_cols=59 Identities=12% Similarity=0.045 Sum_probs=16.6
Q ss_pred CCccCCCCceEEEEEEeCC-CCEEEE------EEecccc--hhhHHHHHHHHHHHhhcCCCccceeeeeee
Q 044428 178 CNLLGIGSFGSVYKGTLSD-GTNVAI------KIFNLQL--ERTFVSFNSECEVLRNVRHRNLIKILSGCS 239 (457)
Q Consensus 178 ~~~lg~G~~g~Vy~~~~~~-g~~vav------K~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 239 (457)
.+.+| ||.||+|.+.. ..+||| |..+... ......|.+|..++...+|||+++..++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 34566 99999999864 467888 6655322 223456888999999999999999887653
No 451
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=82.66 E-value=2.1 Score=41.22 Aligned_cols=61 Identities=15% Similarity=0.324 Sum_probs=46.7
Q ss_pred CccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccc
Q 044428 2 TIGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQN 65 (457)
Q Consensus 2 ~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n 65 (457)
++.++..|+.+.+.++..+ .-...|.++++|+.+.++ +.++ .|+. .|.++.+|+.+++..|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~ 321 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG 321 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc
Confidence 4667889999988776554 333568889999999996 5566 6665 6778999999999764
No 452
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=82.31 E-value=1.4 Score=42.15 Aligned_cols=63 Identities=16% Similarity=0.279 Sum_probs=45.7
Q ss_pred ccCCccCCeeeccCCcccccCC-cccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccccCCC
Q 044428 3 IGGLKDLATLSLAANKFHGPIP-KSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQNRLEG 69 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p-~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n~l~~ 69 (457)
+.++..|+.+.+..+ ++ .|+ ..|.++.+|+.+.+..+ ++ .++. .+..+.+|+.+.+.+|.++.
T Consensus 236 f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~ 300 (379)
T 4h09_A 236 FYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIET 300 (379)
T ss_dssp TTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCE
T ss_pred ccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ce-eccccccccccccccccccccccce
Confidence 456788888888765 55 444 56778888999888654 55 4554 57788899999988877653
No 453
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=80.47 E-value=1.6 Score=42.05 Aligned_cols=58 Identities=16% Similarity=0.128 Sum_probs=38.6
Q ss_pred ccCCccCCeeeccCCcccccCCcccCCCCCCCeEeCcCCccCCCCCc-cchhcCCCceEecccc
Q 044428 3 IGGLKDLATLSLAANKFHGPIPKSFGSLISLESLDLSSNNLSGEIPK-SLEALLYLKQLNVSQN 65 (457)
Q Consensus 3 ~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~l~l~~n~l~g~~p~-~~~~~~~L~~l~l~~n 65 (457)
+.++..|+.+.+..+.+. ...|..+.+|+.+.+.+| ++ .|+. .|.++.+|+.+++.++
T Consensus 272 F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~ 330 (394)
T 4fs7_A 272 FYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL 330 (394)
T ss_dssp TTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred cccccccceeccCceeec---cccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc
Confidence 455667777766665432 245777888888888755 55 5544 5777888888888644
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=77.24 E-value=2.7 Score=25.54 Aligned_cols=15 Identities=27% Similarity=0.284 Sum_probs=6.1
Q ss_pred hhhhhHHHHHHHHHH
Q 044428 119 NYILPPIISIMLLLI 133 (457)
Q Consensus 119 ~~~~~~~~~~~~~~~ 133 (457)
+++++.++++++++.
T Consensus 15 GiVvG~v~gv~li~~ 29 (38)
T 2k1k_A 15 AVIFGLLLGAALLLG 29 (38)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred eeehHHHHHHHHHHH
Confidence 334444444443333
No 455
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=70.42 E-value=5.3 Score=25.11 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=20.7
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 044428 120 YILPPIISIMLLLIAIIVYVRCQNRSTKKS 149 (457)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (457)
++.+.+.++++++++++.++.+.+|++.+.
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 344555567777777777888888887653
No 456
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=69.35 E-value=3.9 Score=25.66 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=21.7
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 044428 120 YILPPIISIMLLLIAIIVYVRCQNRSTKKS 149 (457)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (457)
.++++++++++++++.+.++.+.||++.+.
T Consensus 13 ~Ia~~vVGvll~vi~~l~~~~~~RRR~~~~ 42 (44)
T 2jwa_A 13 SIISAVVGILLVVVLGVVFGILIKRRQQKI 42 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCC
T ss_pred chHHHHHHHHHHHHHHHHHHhheehhhhhc
Confidence 356778887767777777788888877653
No 457
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=65.37 E-value=8.2 Score=24.23 Aligned_cols=30 Identities=17% Similarity=0.204 Sum_probs=20.5
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 044428 120 YILPPIISIMLLLIAIIVYVRCQNRSTKKS 149 (457)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (457)
++.+.+.+++++++.++.++.+.+|++.+.
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 344444557777777777788888877664
No 458
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=49.57 E-value=22 Score=24.21 Aligned_cols=27 Identities=22% Similarity=0.368 Sum_probs=13.0
Q ss_pred hhhHHHHHHHHHHHHHH-hhhhhcCCCC
Q 044428 121 ILPPIISIMLLLIAIIV-YVRCQNRSTK 147 (457)
Q Consensus 121 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 147 (457)
+++++++++++.-+.++ ..+|++|+++
T Consensus 13 vlGg~~~lll~~glcI~ccvkcrhRrrq 40 (70)
T 2klu_A 13 VLGGVAGLLLFIGLGIFFSVRSRHRRRQ 40 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCSSS
T ss_pred HHhHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 45555555544433333 4556555443
No 459
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=44.62 E-value=34 Score=22.42 Aligned_cols=21 Identities=19% Similarity=0.515 Sum_probs=9.4
Q ss_pred hhhhHHHHHHHHHHHHHHhhh
Q 044428 120 YILPPIISIMLLLIAIIVYVR 140 (457)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~ 140 (457)
++++++.+++++++.++..+.
T Consensus 12 Ii~svl~GLLLL~Lii~~LwK 32 (54)
T 2l8s_A 12 ILLSAFAGLLLLMLLILALWK 32 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344445555554444444333
No 460
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=44.35 E-value=1.5e+02 Score=27.69 Aligned_cols=77 Identities=22% Similarity=0.193 Sum_probs=42.7
Q ss_pred eeEEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHH--HHHHHHHHhcCCCCCeee-ccCCCCCeeecCCCc-EEEec
Q 044428 243 FKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDV--GLALEYLHYGHALAPIIH-CDLKPSNILLDENMV-AHVSD 317 (457)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i--a~~l~~LH~~~~~~~ivH-~dlk~~NIll~~~~~-~kl~D 317 (457)
..+++|||.+|..|.+.-...- ..+.. +.+.++ .-+++++..+....+.+. .-=.++|||++++.. +.+.|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 4569999998766543221100 00111 222232 335566655442333333 235789999986554 88899
Q ss_pred cccccc
Q 044428 318 FGISKL 323 (457)
Q Consensus 318 fg~~~~ 323 (457)
-+.+..
T Consensus 232 hn~af~ 237 (342)
T 1cja_A 232 SKIIPL 237 (342)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 988865
No 461
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=35.43 E-value=54 Score=21.47 Aligned_cols=20 Identities=15% Similarity=0.286 Sum_probs=8.7
Q ss_pred hhhhHHHHHHHHHHHHHHhh
Q 044428 120 YILPPIISIMLLLIAIIVYV 139 (457)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~ 139 (457)
++++++.+++++.+.++..+
T Consensus 15 Ii~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 15 VLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444445444444443333
No 462
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=29.28 E-value=4.6e+02 Score=26.56 Aligned_cols=46 Identities=17% Similarity=0.107 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCCeeeccCCCCCeeecCCCcEEEecccccc
Q 044428 269 ILERLNIMIDVG--LALEYLHYGHALAPIIHCDLKPSNILLDENMVAHVSDFGISK 322 (457)
Q Consensus 269 ~~~~~~i~~~ia--~~l~~LH~~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 322 (457)
+..+..++...| ..+.|+= | =+|=.++|||++.+|++.=+|||...
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL------G--igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL------G--VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------T--CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee------e--ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 556666766665 3466664 1 25778999999999999999999874
No 463
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=24.96 E-value=1.4e+02 Score=19.44 Aligned_cols=23 Identities=22% Similarity=0.323 Sum_probs=12.4
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHH
Q 044428 115 LLVLNYILPPIISIMLLLIAIIV 137 (457)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~ 137 (457)
+.++.+++++++.+.++++++.-
T Consensus 13 wiIi~svl~GLllL~li~~~LwK 35 (54)
T 2knc_A 13 WWVLVGVLGGLLLLTILVLAMWK 35 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666555555554443
No 464
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=24.81 E-value=64 Score=23.98 Aligned_cols=39 Identities=10% Similarity=0.174 Sum_probs=29.2
Q ss_pred cccCCCCCCCeEeCcCCccCCCCC-ccchhcCCCceEecccc
Q 044428 25 KSFGSLISLESLDLSSNNLSGEIP-KSLEALLYLKQLNVSQN 65 (457)
Q Consensus 25 ~~~~~l~~l~~l~l~~n~l~g~~p-~~~~~~~~L~~l~l~~n 65 (457)
..|.+|++|+.+.|..+ ++ .|- ..|.+|.+|+.+.+...
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~-~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IG-LLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SS-CCCTTSSTTCTTCCCEEECCS
T ss_pred HHhcCCCCCcEEEcCCc-hh-eEcHHHHhccCCccEEEEcCC
Confidence 46778888998888765 44 343 46888999999988764
No 465
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=22.97 E-value=1.3e+02 Score=18.48 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=9.8
Q ss_pred hhhhHHHHHHHHHHHHHHhhh
Q 044428 120 YILPPIISIMLLLIAIIVYVR 140 (457)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~ 140 (457)
++++++.+++++.+.++..+.
T Consensus 13 Ii~s~l~GLllL~li~~~LwK 33 (42)
T 2k1a_A 13 VLVGVLGGLLLLTILVLAMWK 33 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344445555554444444443
No 466
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=22.12 E-value=1e+02 Score=17.78 Aligned_cols=21 Identities=14% Similarity=0.207 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHHhHHHHhhhh
Q 044428 433 IHTTNAAAKLRKIKVQFLDDV 453 (457)
Q Consensus 433 Ps~~ev~~~L~~i~~~~~~~~ 453 (457)
|+..++++.|..|..+....+
T Consensus 7 p~~K~l~~cL~~IgDEld~N~ 27 (34)
T 3pk1_B 7 ASTKKLSECLKRIGDELDSNM 27 (34)
T ss_dssp CTHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHcccH
Confidence 899999999999998877654
No 467
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=22.11 E-value=1.1e+02 Score=17.79 Aligned_cols=13 Identities=23% Similarity=0.442 Sum_probs=5.9
Q ss_pred HHHHHHHHhhhhh
Q 044428 130 LLLIAIIVYVRCQ 142 (457)
Q Consensus 130 ~~~~~~~~~~~~~ 142 (457)
.++-..++|+|-+
T Consensus 21 ~~lg~tflywrgr 33 (40)
T 2l9u_A 21 MMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHhCceeEEEccc
Confidence 3333444555544
No 468
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=21.16 E-value=98 Score=17.93 Aligned_cols=10 Identities=0% Similarity=0.225 Sum_probs=3.7
Q ss_pred hhhhHHHHHH
Q 044428 120 YILPPIISIM 129 (457)
Q Consensus 120 ~~~~~~~~~~ 129 (457)
++++.+++.+
T Consensus 12 IVvgdi~~t~ 21 (33)
T 2l34_A 12 IVVGDLVLTV 21 (33)
T ss_dssp HHHHHHHHHH
T ss_pred EeHHHHHHHH
Confidence 3333333333
Done!