BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044432
MVGSNQKRHLLLYSLVALVFFYSYYYHSSLPTSKNLTRTETETFNLIPQNAPSHSSNFTL
IIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLD
GFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN
YYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKE
FRLWYDDHKARGIKPFLDGMRALSVSHRDAGVNYGKSAGPDSKLLDESSLDFNILKMQPL
SNLKWYDFCFREVFPGRVVKSMDDLGTVLPSVQRQETVLVVSLFGASDAVTRNLLCQFER
INSQNHIFLGSHSDFLYDLARRGHPVIDADQFLNDIRAYESLSLQSSDARLTKEVLVKVY
VIKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTK
NFLYEVANLVDKVSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIGLDIGTGSANQSSS
AVGKKIVYWSADLGPDRIQKQLEELSLWDIDSDSSCKAVICHQS

High Scoring Gene Products

Symbol, full name Information P value
AT5G12260 protein from Arabidopsis thaliana 5.9e-161
AT5G60700 protein from Arabidopsis thaliana 6.7e-16

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044432
        (584 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2177013 - symbol:AT5G12260 "AT5G12260" species...   806  5.9e-161  2
TAIR|locus:2175786 - symbol:AT5G60700 "AT5G60700" species...   231  6.7e-16   1


>TAIR|locus:2177013 [details] [associations]
            symbol:AT5G12260 "AT5G12260" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0007059
            "chromosome segregation" evidence=RCA] [GO:0007129 "synapsis"
            evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
            evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
            formation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005802
            "trans-Golgi network" evidence=IDA] [GO:0016757 "transferase
            activity, transferring glycosyl groups" evidence=ISM] GO:GO:0005794
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005768 GO:GO:0005802
            EMBL:AB007727 EMBL:AY123994 EMBL:BT010470 IPI:IPI00518516
            RefSeq:NP_196787.1 UniGene:At.32158 PaxDb:Q9FMN8 PRIDE:Q9FMN8
            EnsemblPlants:AT5G12260.1 GeneID:831101 KEGG:ath:AT5G12260
            TAIR:At5g12260 eggNOG:NOG293551 HOGENOM:HOG000237777
            InParanoid:Q9FMN8 OMA:FAFVVED PhylomeDB:Q9FMN8
            ProtClustDB:CLSN2686829 Genevestigator:Q9FMN8 Uniprot:Q9FMN8
        Length = 624

 Score = 806 (288.8 bits), Expect = 5.9e-161, Sum P(2) = 5.9e-161
 Identities = 167/374 (44%), Positives = 229/374 (61%)

Query:   213 HLDNGTQLFLYQLVGT-WGQLLFPQPWKEFRLWYDDHKAR-GIKPFLDGMRALSVSHRDA 270
             H   G + FL  +V   W + L  + W  + + +   +    I        ALSVSHRDA
Sbjct:   265 HKSKGKKPFLDGMVSNGWYKRLGERIWTPWFIKFVHSRGYFNIYTSFPNEGALSVSHRDA 324

Query:   271 GVNYGKSAGPDSKLLDESSLDFNILKMQPLSNLKWYDFCFREVFPGRVVKSMDDLGTVLP 330
             GVNYG++AGPDS+LL++SSL  + LK+QPLSNLKWYDFCF EV PGRVV+++++LGT+LP
Sbjct:   325 GVNYGRTAGPDSQLLNKSSLSSDSLKLQPLSNLKWYDFCFSEVVPGRVVRNLNELGTILP 384

Query:   331 SVQRQETVLVVSLFGASDAVTRNLLCQFERINSQNHIFLGSHSDFLYDLARRGHPVIDAD 390
             SVQR++T+++VSL+GA     RNLLC FE++N QNHIF+G  S+  +DL+RRGHPVIDAD
Sbjct:   385 SVQREKTIILVSLYGADKMFIRNLLCHFEKLNIQNHIFIGPSSELFHDLSRRGHPVIDAD 444

Query:   391 QFLNDIRAYESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVVDANFLPFSNDLFLEP 450
              FLN +     +  ++S     KE L   YV+KKCLE  YS W   +N L       L+ 
Sbjct:   445 MFLNKL-----IKSKTSYPNSVKEALGNSYVVKKCLELGYSTWAFSSNSLLVDKGRLLDR 499

Query:   451 IDATSDFYYGEXXXXXXXXXXXXXQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLL 510
             + +  D Y GE             QK+W+  FL+ +A+       P+   +F +++  L+
Sbjct:   500 VSSDYDIYIGESSGILIVQSSSVTQKLWSNEFLHSIAS-------PKQSLDFIHLVKELV 552

Query:   511 RQKAGVMIKRVDESKIGLDIGTGSANQSSSAVGKKIVYWSADLGPDRIQKQLEELSLWDI 570
              QK G  IK V+   I  +    S NQS    GK +VYWS ++ P+ I+ +LEELSLW I
Sbjct:   553 EQK-GKRIKTVETMNIAENTNANSVNQSLGD-GKPVVYWSPEVAPNMIRSKLEELSLWLI 610

Query:   571 DSDSSCKAVICHQS 584
             D D SCKAV+CH S
Sbjct:   611 DDDLSCKAVVCHSS 624

 Score = 783 (280.7 bits), Expect = 5.9e-161, Sum P(2) = 5.9e-161
 Identities = 148/210 (70%), Positives = 167/210 (79%)

Query:    58 FTLIIKVLTFNRLNSLSRCLHSLSAADYLTD----RVHLHVYVDHSAPLADQSSSESD-- 111
             FT +IKVLTFNRL+SLSRCL SLSAADY       R+HLHVY+DH     + +  E +  
Sbjct:    69 FTFLIKVLTFNRLHSLSRCLRSLSAADYGVSGDRGRIHLHVYIDHFNLARNDTPVEDNLQ 128

Query:   112 -SRAILRFLDGFEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLF 170
              +R IL F+D FEW+FG+K VHYRT NAGLQAQWLEAWWP SDHEFAFVVEDDLEVSPL+
Sbjct:   129 IAREILGFVDRFEWRFGEKVVHYRTDNAGLQAQWLEAWWPISDHEFAFVVEDDLEVSPLY 188

Query:   171 YKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWG 230
             Y  L  LI+ YYY   SN   SIYGASLQRPRFVPGKHGNK+H+D  T L LYQLVGTWG
Sbjct:   189 YGILERLILKYYYDT-SNFNPSIYGASLQRPRFVPGKHGNKLHVDPKTNLILYQLVGTWG 247

Query:   231 QLLFPQPWKEFRLWYDDHKARGIKPFLDGM 260
             QLLFP+PWKEFRLWYD+HK++G KPFLDGM
Sbjct:   248 QLLFPKPWKEFRLWYDEHKSKGKKPFLDGM 277


>TAIR|locus:2175786 [details] [associations]
            symbol:AT5G60700 "AT5G60700" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0009058
            "biosynthetic process" evidence=ISS] [GO:0016757 "transferase
            activity, transferring glycosyl groups" evidence=ISS] EMBL:CP002688
            GO:GO:0016740 UniGene:At.49201 UniGene:At.7238 eggNOG:NOG82792
            EMBL:AK117290 IPI:IPI00546299 RefSeq:NP_200878.2 PRIDE:Q8GYZ9
            DNASU:836191 EnsemblPlants:AT5G60700.1 GeneID:836191
            KEGG:ath:AT5G60700 InParanoid:Q8GYZ9 OMA:DWPHGPK
            ProtClustDB:CLSN2680578 Genevestigator:Q8GYZ9 Uniprot:Q8GYZ9
        Length = 668

 Score = 231 (86.4 bits), Expect = 6.7e-16, P = 6.7e-16
 Identities = 59/192 (30%), Positives = 97/192 (50%)

Query:    62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDG 121
             + ++T NR  SL R L SLS A YL D + L   +D          S+ D   I   +  
Sbjct:   337 VNIITQNRAQSLLRLLRSLSNAYYLGDEISLSFNMD----------SKVDEETI-NVVST 385

Query:   122 FEWKFGDKFVHYRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNY 181
             F+W  G K +  R    GL     E+W+P SD +F  ++EDD+EVSP ++ +++  ++ Y
Sbjct:   386 FDWPHGPKTLRRRIIQGGLIRAVSESWYPASDDDFGLLLEDDIEVSPYYFLWIKYALLAY 445

Query:   182 YYHA----PSNLTRSIYGASL-----QRPRFVPGKHGNKIHLDNGTQLFLYQLVGTWGQL 232
             +Y      P   + S+Y   +     +RP++ P     +IH       +L+QL  +WG +
Sbjct:   446 HYDPQVSFPELSSISLYTPKIVEVVKERPKWNPTDFFKQIHPHTP---YLHQLPCSWGAV 502

Query:   233 LFPQPWKEFRLW 244
              FP+ W+EF ++
Sbjct:   503 FFPKQWREFYVY 514


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      584       571   0.00080  120 3  11 22  0.37    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  633 (67 KB)
  Total size of DFA:  347 KB (2172 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  44.80u 0.19s 44.99t   Elapsed:  00:00:02
  Total cpu time:  44.80u 0.19s 44.99t   Elapsed:  00:00:02
  Start:  Mon May 20 15:25:46 2013   End:  Mon May 20 15:25:48 2013

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