BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044432
(584 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6LG09|OTC_PHOPR Ornithine carbamoyltransferase OS=Photobacterium profundum GN=argF
PE=3 SV=1
Length = 333
Score = 36.6 bits (83), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 65 LTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEW 124
L F + ++ +RC ++A D H+ Y+ + + + S++ +R + RF DG E+
Sbjct: 51 LIFEKTSTRTRCAFEVAAHD---QGAHV-TYIGGGSQMGHKESTKDTARVLGRFYDGIEY 106
Query: 125 K-FGDKFVHYRTANAGLQAQW---LEAWWPT 151
+ FG V +AG+ W + W PT
Sbjct: 107 RGFGQDVVETLGEHAGVPV-WNGLTDEWHPT 136
>sp|P33284|HXK_KLULA Hexokinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RAG5 PE=1
SV=3
Length = 485
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 22/144 (15%)
Query: 422 IKKCLEYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKN 481
I KCL+ W D EP+ F Y S K K +S V + WTK
Sbjct: 130 IAKCLKEFVDEWYPDG---------VSEPLPLGFTFSYPASQK----KINSGVLQRWTKG 176
Query: 482 FLYEVANLVDKVSLPRDHRNFANIMAN---LLRQKAGVMIKRV---DESKIGLDIGTGSA 535
F E D V + ++ NI N L+ G ++ + ++K+G+ IGTG
Sbjct: 177 FDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVN 236
Query: 536 N---QSSSAVGKKIVYWSADLGPD 556
S + K D+GPD
Sbjct: 237 GAYYDVVSGIEKLEGLLPEDIGPD 260
>sp|Q1GXL9|MNMG_METFK tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875) GN=mnmG PE=3 SV=1
Length = 634
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 137 NAGLQAQWLEAWWPTSDHEFAFVVEDDL 164
NA L AQ +AWWPT D + V+ DDL
Sbjct: 390 NAALYAQEKDAWWPTRDQAYLGVLVDDL 417
>sp|B0BRY1|MNMG_ACTPJ tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Actinobacillus pleuropneumoniae serotype 3 (strain
JL03) GN=mnmG PE=3 SV=1
Length = 630
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 137 NAGLQAQWLEAWWPTSDHEFAFVVEDDL 164
NA LQ Q EAW+PT D + V+ DDL
Sbjct: 390 NAALQVQGKEAWFPTRDLAYTGVLVDDL 417
>sp|B3H2Q2|MNMG_ACTP7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Actinobacillus pleuropneumoniae serotype 7 (strain
AP76) GN=mnmG PE=3 SV=1
Length = 630
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 137 NAGLQAQWLEAWWPTSDHEFAFVVEDDL 164
NA LQ Q EAW+PT D + V+ DDL
Sbjct: 390 NAALQVQGKEAWFPTRDLAYTGVLVDDL 417
>sp|A3N2V3|MNMG_ACTP2 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Actinobacillus pleuropneumoniae serotype 5b (strain
L20) GN=mnmG PE=3 SV=1
Length = 630
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 137 NAGLQAQWLEAWWPTSDHEFAFVVEDDL 164
NA LQ Q EAW+PT D + V+ DDL
Sbjct: 390 NAALQVQGKEAWFPTRDLAYTGVLVDDL 417
>sp|A6TWW1|OTC_ALKMQ Ornithine carbamoyltransferase OS=Alkaliphilus metalliredigens
(strain QYMF) GN=argF PE=3 SV=1
Length = 330
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 64 VLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFE 123
VL F + ++ +RC ++A D + H+ + + + + S E ++ + RF DG E
Sbjct: 50 VLLFEKASTRTRCAFEVAALD---EGAHVTFLGSNDSQIGKKESIEDTAKVLGRFYDGME 106
Query: 124 WK-FGDKFVHYRTANAGL 140
++ F + V A+AG+
Sbjct: 107 FRGFKQETVETLAAHAGI 124
>sp|Q50EK0|C16B2_PICSI Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1
Length = 497
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 468 VKSSSSVQKMWTKNFLYEVANLVDKVSLPRDHRNFANIMANLLRQKAGVMIKRVDESKIG 527
+ + + ++W ++ + + LP N A AN +RQ+ G +I +E KIG
Sbjct: 206 INNKDDLGRLWLHFMVFVKGVMQIPIDLPGTRYNKAKHAANAIRQQLGSII---NERKIG 262
Query: 528 LDIGTGSANQ 537
L+ G S Q
Sbjct: 263 LEAGNASPEQ 272
>sp|Q02155|HXK_PLAFA Hexokinase OS=Plasmodium falciparum GN=HK PE=3 SV=1
Length = 493
Score = 33.5 bits (75), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 427 EYRYSAWVVDANFLPFSNDLFLEPIDATSDFYYGESSKLLFVKSSSSVQKMWTKNFLYEV 486
+Y+Y+ +++ F F DL PID D+Y S+ LF +KM + +L E+
Sbjct: 281 KYKYAGKIINIEFGNFDKDLPTSPIDLVMDWYSANRSRQLF-------EKMISGAYLGEI 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,229,399
Number of Sequences: 539616
Number of extensions: 8966953
Number of successful extensions: 19824
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 19819
Number of HSP's gapped (non-prelim): 12
length of query: 584
length of database: 191,569,459
effective HSP length: 123
effective length of query: 461
effective length of database: 125,196,691
effective search space: 57715674551
effective search space used: 57715674551
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)