Query 044432
Match_columns 584
No_of_seqs 141 out of 223
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 05:04:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044432.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044432hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fo8_A Alpha-1,3-mannosyl-glyc 99.9 1.2E-23 4E-28 216.9 12.4 199 58-276 2-221 (343)
2 1qg8_A Protein (spore coat pol 98.3 8E-06 2.7E-10 76.1 12.8 106 59-180 2-115 (255)
3 3bcv_A Putative glycosyltransf 98.1 1.6E-05 5.4E-10 73.3 11.6 105 59-180 6-111 (240)
4 1xhb_A Polypeptide N-acetylgal 97.9 5E-05 1.7E-09 78.6 11.8 113 57-180 28-141 (472)
5 2d7i_A Polypeptide N-acetylgal 97.7 0.00011 3.7E-09 79.3 10.1 112 57-180 111-223 (570)
6 2ffu_A Ppgalnact-2, polypeptid 97.6 0.00017 5.7E-09 75.7 9.9 108 57-180 65-173 (501)
7 2z86_A Chondroitin synthase; G 97.5 0.00082 2.8E-08 71.9 13.0 108 58-180 93-201 (625)
8 4fix_A UDP-galactofuranosyl tr 97.3 0.00042 1.4E-08 76.8 9.0 113 57-180 179-295 (657)
9 2z86_A Chondroitin synthase; G 97.2 0.0015 5.2E-08 69.8 11.4 107 57-180 374-481 (625)
10 4hg6_A Cellulose synthase subu 97.2 0.00083 2.8E-08 75.6 9.2 126 58-198 140-274 (802)
11 3ckj_A Putative uncharacterize 97.1 0.0014 4.9E-08 65.2 9.5 110 57-180 47-159 (329)
12 3l7i_A Teichoic acid biosynthe 96.6 0.00035 1.2E-08 77.0 0.0 106 59-179 3-109 (729)
13 3f1y_A Mannosyl-3-phosphoglyce 96.6 0.0028 9.6E-08 65.9 6.8 110 57-180 93-207 (387)
14 2fy7_A Beta-1,4-galactosyltran 93.1 0.089 3E-06 52.6 5.3 80 57-170 64-146 (287)
15 2nxv_A ATP synthase subunits r 89.9 1.5 5E-05 41.8 9.7 88 57-181 15-102 (249)
16 1omz_A Alpha-1,4-N-acetylhexos 88.9 6.4 0.00022 40.2 14.0 111 60-198 30-143 (293)
17 2wvl_A Mannosyl-3-phosphoglyce 80.9 7.6 0.00026 41.3 10.3 106 56-176 51-182 (391)
18 2bo4_A Mannosylglycerate synth 75.5 7.1 0.00024 40.9 8.2 108 62-180 3-120 (397)
19 2gak_A Beta-1,6-N-acetylglucos 52.8 38 0.0013 35.2 8.4 97 55-170 81-189 (391)
20 1ukz_A Uridylate kinase; trans 43.7 57 0.002 29.1 7.1 17 422-438 88-104 (203)
21 3txv_A Probable tagatose 6-pho 30.1 23 0.00077 38.4 2.4 31 414-444 108-139 (450)
22 1gvf_A Tagatose-bisphosphate a 26.4 23 0.0008 35.9 1.6 22 422-443 90-111 (286)
23 3be4_A Adenylate kinase; malar 24.9 1.3E+02 0.0044 27.5 6.3 32 364-395 6-42 (217)
24 3q94_A Fructose-bisphosphate a 24.0 26 0.00088 35.6 1.4 22 422-443 96-117 (288)
25 1zuh_A Shikimate kinase; alpha 22.1 47 0.0016 28.8 2.6 34 362-395 6-44 (168)
26 1knq_A Gluconate kinase; ALFA/ 21.4 1.8E+02 0.0062 25.1 6.3 72 364-438 9-88 (175)
27 3n9r_A Fructose-bisphosphate a 21.2 31 0.0011 35.4 1.4 22 422-443 90-111 (307)
28 1qf9_A UMP/CMP kinase, protein 21.0 2.4E+02 0.0082 24.2 7.0 33 364-396 7-44 (194)
29 2isw_A Putative fructose-1,6-b 20.9 36 0.0012 35.2 1.8 22 422-443 91-112 (323)
30 4i1u_A Dephospho-COA kinase; s 20.4 33 0.0011 33.0 1.3 39 356-395 7-45 (210)
No 1
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=99.90 E-value=1.2e-23 Score=216.89 Aligned_cols=199 Identities=18% Similarity=0.215 Sum_probs=130.8
Q ss_pred eeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHh-hccccC-CCceEEE-ee
Q 044432 58 FTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFL-DGFEWK-FGDKFVH-YR 134 (584)
Q Consensus 58 m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L-~gF~WP-~g~vtIi-~R 134 (584)
+.+||++++||||+ |+|+|+||.++.+......++|.-|+. .++++++++-. ..+.|- +.++..+ .|
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs---------~~~~~~vi~~~~~~I~~~~~~d~~~~~~~ 71 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCG---------HEETAQVIASYGSAVTHIRQPDLSNIAVQ 71 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTT---------CHHHHHHHHTTGGGSEEEECSCCCCCCCC
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCC---------CHHHHHHHHHcCCceEEEEcCCccccccc
Confidence 45799999999998 999999999998766566788888885 34445544321 113332 3444433 38
Q ss_pred cCCcchh------HHHhhhc-cCCC--CCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEeecCCCCC
Q 044432 135 TANAGLQ------AQWLEAW-WPTS--DHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASLQRPRFVP 205 (584)
Q Consensus 135 ~~NlGLa------~sIIEgw-yPts--~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISLY~P~f~~ 205 (584)
++|+|++ .++..+. +..+ .++++|+||||+++||+||+||++++..|+.+ ++|++||+|+.....
T Consensus 72 ~~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D------~~I~~ISa~n~~g~~ 145 (343)
T 1fo8_A 72 PDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKAD------PSLWCVSAWNDNGKE 145 (343)
T ss_dssp TTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHC------TTEEEEESCCTTCBG
T ss_pred hhhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcC------CcEEEEecccCcccc
Confidence 8999974 7777774 3333 68999999999999999999999999999988 499999999875321
Q ss_pred CCCCCcccCCCCCCceeeecCCcchhhcCccchHHHH---------HHHHHhhhcCCCCcccccccceeccccccccccC
Q 044432 206 GKHGNKIHLDNGTQLFLYQLVGTWGQLLFPQPWKEFR---------LWYDDHKARGIKPFLDGMRALSVSHRDAGVNYGK 276 (584)
Q Consensus 206 ~k~~~~i~~d~~~d~FL~Q~PsSWGwatw~d~WkeF~---------~w~~~~~~~g~~P~Le~mrSlstnh~~aGvh~~~ 276 (584)
. ..........|+.+...+|||++|++.|++|. .|+.+....+-.-.+.=-.|++.|...-|+|-+.
T Consensus 146 ~----~~~~~~~~~lyrs~~f~~wGWa~wr~~W~e~~~~wp~~~Wd~w~r~~~~~~~r~ci~P~vsrv~n~G~~G~~~~~ 221 (343)
T 1fo8_A 146 Q----MVDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACVRPEISRTMTFGRKGVSHGQ 221 (343)
T ss_dssp G----GSCTTCTTCEEEESSCCCSSEEEEHHHHHHHGGGCCSSCHHHHHTSHHHHTTCEEEEESSBSEEECC--------
T ss_pred c----cccccCcceEEeecCCCchhhhhcHHHHHHHhhhcchhHHHHHHHHHHHhCCCEEEEeccceeEeccccCcchhH
Confidence 1 11111233467777788999999999999885 3332211110000000004778887888877543
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=98.27 E-value=8e-06 Score=76.10 Aligned_cols=106 Identities=11% Similarity=0.072 Sum_probs=81.5
Q ss_pred eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec---
Q 044432 59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT--- 135 (584)
Q Consensus 59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~--- 135 (584)
.+.|++.+|||++.+.++|+||.+..+. ..+++|--|++. +.+.+ .++.+.- ...+++++..
T Consensus 2 ~vSViIp~yn~~~~l~~~l~Sl~~q~~~--~~eiivvDd~S~---------d~t~~---~~~~~~~-~~~i~~i~~~~~~ 66 (255)
T 1qg8_A 2 KVSVIMTSYNKSDYVAKSISSILSQTFS--DFELFIMDDNSN---------EETLN---VIRPFLN-DNRVRFYQSDISG 66 (255)
T ss_dssp CEEEEEEESSCTTTHHHHHHHHHTCSCC--CEEEEEEECSCC---------HHHHH---HHGGGGG-STTEEEEECCCCS
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHhccCC--ceEEEEEECCCC---------chHHH---HHHHHhh-cCCEEEEeccccc
Confidence 4789999999999999999999987764 678888888763 22233 4444421 3578888888
Q ss_pred -----CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432 136 -----ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN 180 (584)
Q Consensus 136 -----~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~ 180 (584)
.|.|.+.+.-.|+-- ...+++++|+||..+.|.++.-+..++..
T Consensus 67 ~~~~~~n~G~~~a~N~gi~~-a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~ 115 (255)
T 1qg8_A 67 VKERTEKTRYAALINQAIEM-AEGEYITYATDDNIYMPDRLLKMVRELDT 115 (255)
T ss_dssp HHHHHSSCHHHHHHHHHHHH-CCCSEEEEEETTEEECTTHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHHHH-cCCCEEEEeCCCCccChHHHHHHHHHHHh
Confidence 899997766555321 25789999999999999999999888865
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=98.14 E-value=1.6e-05 Score=73.27 Aligned_cols=105 Identities=17% Similarity=0.178 Sum_probs=78.8
Q ss_pred eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHH-HHhhccccCCCceEEEeecCC
Q 044432 59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAIL-RFLDGFEWKFGDKFVHYRTAN 137 (584)
Q Consensus 59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrell-k~L~gF~WP~g~vtIi~R~~N 137 (584)
.+.|++.+|||++.+.+||+||.+..+. ..+++|--|++.++ +.+++ ++...+ ..+++++ .+|
T Consensus 6 ~vsViIp~yn~~~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~---------t~~~~~~~~~~~----~~i~~i~-~~n 69 (240)
T 3bcv_A 6 KVSVIVPIYNVEKYLDQCVQALLAQTLS--DIEIILIDDESPDN---------CPKICDDYAAQY----PNIKVIH-KKN 69 (240)
T ss_dssp SEEEEEEESSCTTTHHHHHHHHHTCSSS--SEEEEEEECCCSSS---------HHHHHHHHHHHC----SSEEEEE-CCC
T ss_pred cEEEEEecCCCHHHHHHHHHHHHhCcCC--CeEEEEEECCCCcC---------HHHHHHHHHhhC----CCEEEEE-CCC
Confidence 4889999999999999999999987664 67888887876422 12222 233333 4677775 679
Q ss_pred cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432 138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN 180 (584)
Q Consensus 138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~ 180 (584)
.|.+.+.=.|+--. ..+++++|+||..+.|.++.-+..++..
T Consensus 70 ~G~~~a~N~g~~~a-~g~~i~~lD~Dd~~~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 70 AGLGMACNSGLDVA-TGEYVAFCDSDDYVDSDMYMTMYNVAQK 111 (240)
T ss_dssp CCHHHHHHHHHHHC-CSSEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHc-CCCEEEEECCCCcCCHHHHHHHHHHHHh
Confidence 99977666663212 5689999999999999999999888866
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=97.93 E-value=5e-05 Score=78.62 Aligned_cols=113 Identities=14% Similarity=0.051 Sum_probs=83.8
Q ss_pred ceeEEEEEEcCCCc-hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec
Q 044432 57 NFTLIIKVLTFNRL-NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT 135 (584)
Q Consensus 57 ~m~I~IvVfaYNRP-~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~ 135 (584)
.+.+.|++.+||++ +.|.|+|+||.+..|.....+++|--|++.+.. ..+ .+.++++.+ | ..+++++.+
T Consensus 28 ~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~----t~~---~l~~~~~~~--~-~~v~vi~~~ 97 (472)
T 1xhb_A 28 LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDF----LKR---PLESYVKKL--K-VPVHVIRME 97 (472)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGG----GTH---HHHHHHHSS--S-SCEEEEECS
T ss_pred CCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHH----HHH---HHHHHHHHC--C-CcEEEEECC
Confidence 34689999999999 999999999999877543357888777764211 111 123344444 1 278999999
Q ss_pred CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432 136 ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN 180 (584)
Q Consensus 136 ~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~ 180 (584)
+|.|++.+.-.|.--. ..+++++|++|+++.|.++.-+..++..
T Consensus 98 ~n~G~~~a~N~g~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~ 141 (472)
T 1xhb_A 98 QRSGLIRARLKGAAVS-RGQVITFLDAHCECTAGWLEPLLARIKH 141 (472)
T ss_dssp SCCCHHHHHHHHHHHC-CSSEEEEEESSEEECTTCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHhc-cCCeEEEECCCeEeCccHHHHHHHHHHh
Confidence 9999988777764212 4789999999999999999888888754
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=97.69 E-value=0.00011 Score=79.26 Aligned_cols=112 Identities=13% Similarity=0.022 Sum_probs=83.5
Q ss_pred ceeEEEEEEcCCCc-hHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec
Q 044432 57 NFTLIIKVLTFNRL-NSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT 135 (584)
Q Consensus 57 ~m~I~IvVfaYNRP-~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~ 135 (584)
.+.+.|++.+||+. +.|.|+|+||.+..+.....+++|--|++.+.. +. ..+.++++.+ ..+++++..
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~t-----l~--~~l~~~~~~~----~~v~vi~~~ 179 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREH-----LK--KPLEDYMALF----PSVRILRTK 179 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGG-----GT--HHHHHHHTTS----TTEEEEECS
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHH-----HH--HHHHHHHHhC----CeEEEEECC
Confidence 34589999999998 999999999998776533347788777764221 11 1223344444 479999999
Q ss_pred CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432 136 ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN 180 (584)
Q Consensus 136 ~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~ 180 (584)
+|.|++.+.-.|+--. ..+++++|.+|+++.|.++.-|..++..
T Consensus 180 ~n~G~~~A~N~G~~~A-~gd~i~fLD~D~~~~p~~L~~ll~~l~~ 223 (570)
T 2d7i_A 180 KREGLIRTRMLGASVA-TGDVITFLDSHCEANVNWLPPLLDRIAR 223 (570)
T ss_dssp SCCCHHHHHHHHHHHC-CSSEEEECCSSEEECTTCSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhc-CCCEEEEEcCCccccccHHHHHHHHHHh
Confidence 9999988877774322 4689999999999999999988888754
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=97.61 E-value=0.00017 Score=75.69 Aligned_cols=108 Identities=11% Similarity=-0.022 Sum_probs=82.1
Q ss_pred ceeEEEEEEcCCCch-HHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec
Q 044432 57 NFTLIIKVLTFNRLN-SLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT 135 (584)
Q Consensus 57 ~m~I~IvVfaYNRP~-sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~ 135 (584)
.+.+.|++.+||+.+ .|.|+|+||.+..+.....+++|--|++.+++ +...+..+ ..+++++..
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t-----------~~~~~~~~----~~v~vi~~~ 129 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPE-----------DGALLGKI----EKVRVLRND 129 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTH-----------HHHGGGGB----TTEEEEECS
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchH-----------HHHHHhcC----CCEEEEECC
Confidence 346899999999998 89999999998776533347777777764211 12233433 478999999
Q ss_pred CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432 136 ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN 180 (584)
Q Consensus 136 ~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~ 180 (584)
.|.|++.+.-.|.--. ..+++++|.+|+++.|.++.=|..++..
T Consensus 130 ~n~G~~~A~N~G~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~ 173 (501)
T 2ffu_A 130 RREGLMRSRVRGADAA-QAKVLTFLDSHCECNEHWLEPLLERVAE 173 (501)
T ss_dssp SCCHHHHHHHHHHHHC-CSSEEEECCSSEEECTTCHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHhc-CCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 9999988877774222 4789999999999999999988888755
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=97.47 E-value=0.00082 Score=71.86 Aligned_cols=108 Identities=18% Similarity=0.103 Sum_probs=76.5
Q ss_pred eeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecCC
Q 044432 58 FTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTAN 137 (584)
Q Consensus 58 m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~N 137 (584)
+.+.|++.+|||++.+.++|+||.+..+.. ..+++|--|++.++ +.+ .++.+.-. ..++++.+..+
T Consensus 93 p~vsviIp~~n~~~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~---------t~~---~~~~~~~~-~~i~~i~~~~~ 158 (625)
T 2z86_A 93 DGLSIVIPTYNRAKILAITLACLCNQKTIY-DYEVIVADDGSKEN---------IEE---IVREFESL-LNIKYVRQKDY 158 (625)
T ss_dssp CCEEEEEEESSCHHHHHHHHHHHHTCCCSS-CEEEEEEEESCSSC---------HHH---HHHTTTTT-SCEEEEEECCC
T ss_pred CcEEEEEecCCcHHHHHHHHHHHHhhccCC-CeEEEEEeCCCchh---------HHH---HHHHhhhc-CCeEEEEeCCC
Confidence 468999999999999999999999876543 67888888886421 233 33444211 25666666543
Q ss_pred -cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432 138 -AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN 180 (584)
Q Consensus 138 -lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~ 180 (584)
.|.+.+.-.|+--. ..+++++|++|.++.|.|+.-+..++..
T Consensus 159 ~~g~~~a~N~g~~~a-~g~~v~~lD~D~~~~~~~l~~~~~~~~~ 201 (625)
T 2z86_A 159 GYQLCAVRNLGLRAA-KYNYVAILDCDMAPNPLWVQSYMELLAV 201 (625)
T ss_dssp SCCHHHHHHHHHHHC-CSSEEEEECTTEEECTTHHHHHHHHHHH
T ss_pred CcchhHHHHHHHHhC-CcCEEEEECCCCCCCHHHHHHHHHHHhc
Confidence 35655544443112 5789999999999999999999888765
No 8
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=97.33 E-value=0.00042 Score=76.75 Aligned_cols=113 Identities=14% Similarity=0.149 Sum_probs=76.8
Q ss_pred ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCce-eEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeec
Q 044432 57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRV-HLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRT 135 (584)
Q Consensus 57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v-~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~ 135 (584)
...+.|++.+|||++.+.+||+||.+..+..+.. +++|-=|++.+.++ .+ .+.+.++.. ...++++...
T Consensus 179 ~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~----~~---~~~e~~~~~---~~~I~vI~~~ 248 (657)
T 4fix_A 179 TANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRD----HP---DFPAAAARL---GSRLSIHDQP 248 (657)
T ss_dssp CCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGG----ST---THHHHHHHH---GGGEEEEECC
T ss_pred CCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccc----hH---HHHHHHHhc---CCCEEEEECC
Confidence 4568999999999999999999998865533334 56666666542111 11 122233322 1378888777
Q ss_pred CCcchhHHHhhhcc-CCC--CCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432 136 ANAGLQAQWLEAWW-PTS--DHEFAFVVEDDLEVSPLFYKFLRGLIVN 180 (584)
Q Consensus 136 ~NlGLa~sIIEgwy-Pts--~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~ 180 (584)
|.|.+...-.|.. ... +.+++++|.||.++.|.++.-|..++..
T Consensus 249 -N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~ 295 (657)
T 4fix_A 249 -NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRF 295 (657)
T ss_dssp -CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHh
Confidence 9998665444421 111 4689999999999999999888888754
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=97.21 E-value=0.0015 Score=69.80 Aligned_cols=107 Identities=13% Similarity=0.036 Sum_probs=79.1
Q ss_pred ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHH-HhhccccCCCceEEEeec
Q 044432 57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILR-FLDGFEWKFGDKFVHYRT 135 (584)
Q Consensus 57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk-~L~gF~WP~g~vtIi~R~ 135 (584)
.+.+.|++.+|||.+.+.++|+||.+..|. ..+++|--|++.++ +.++++ +...+ ..++++. .
T Consensus 374 ~~~vsiii~~yn~~~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~---------t~~~~~~~~~~~----~~i~~~~-~ 437 (625)
T 2z86_A 374 VPLVSIYIPAYNCSKYIVRCVESALNQTIT--DLEVCICDDGSTDD---------TLRILQEHYANH----PRVRFIS-Q 437 (625)
T ss_dssp SCSEEEEEEESSCTTTHHHHHHHHHSSSCC--SEEEEEEEESCSSS---------HHHHHHHHHTTC----TTEEEEE-E
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHhCcCC--CeEEEEEECcCChh---------HHHHHHHHHhhC----CcEEEEe-C
Confidence 345899999999999999999999987764 57888888887422 123322 22322 4677774 7
Q ss_pred CCcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHh
Q 044432 136 ANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVN 180 (584)
Q Consensus 136 ~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~ 180 (584)
.|.|.+.+.-.|+--. ..+++++|++|.++.|.++.-+..++..
T Consensus 438 ~n~G~~~a~n~g~~~a-~g~~i~~ld~D~~~~~~~l~~~~~~~~~ 481 (625)
T 2z86_A 438 KNKGIGSASNTAVRLC-RGFYIGQLDSDDFLEPDAVELCLDEFRK 481 (625)
T ss_dssp CCCCHHHHHHHHHHHC-CSSEEEECCTTCEECTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhc-CCCEEEEECCCcccChhHHHHHHHHHHh
Confidence 8999987776664212 5689999999999999999888777654
No 10
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=97.17 E-value=0.00083 Score=75.63 Aligned_cols=126 Identities=15% Similarity=0.088 Sum_probs=85.5
Q ss_pred eeEEEEEEcCCCchHH-HHHHHHHhcCCCCCCceeEEEEecCCCCCcC---CCcchhhH----HHHHHHhhccccCCCce
Q 044432 58 FTLIIKVLTFNRLNSL-SRCLHSLSAADYLTDRVHLHVYVDHSAPLAD---QSSSESDS----RAILRFLDGFEWKFGDK 129 (584)
Q Consensus 58 m~I~IvVfaYNRP~sL-kRLL~SL~~AdY~gd~v~L~IflD~pk~~s~---~~~kVdev----rellk~L~gF~WP~g~v 129 (584)
..+.|++.+||++..+ .++|+||.+.+|..+..+++|--|++.+++. +++.+++. ..+.++.+.. .+
T Consensus 140 P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~-----~v 214 (802)
T 4hg6_A 140 PTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCREL-----GV 214 (802)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH-----TC
T ss_pred CcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhc-----Cc
Confidence 3589999999999776 9999999998998777889999998753220 11111111 1122222322 45
Q ss_pred EEEeecCC-cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEe
Q 044432 130 FVHYRTAN-AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASL 198 (584)
Q Consensus 130 tIi~R~~N-lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISL 198 (584)
.++.|.+| .|.+.+.-.+.. ..+.++++++++|..+.|+++.-+...+.+ + +++..|.+
T Consensus 215 ~~i~~~~~~~GKa~alN~gl~-~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~---d------p~v~~V~~ 274 (802)
T 4hg6_A 215 VYSTRERNEHAKAGNMSAALE-RLKGELVVVFDADHVPSRDFLARTVGYFVE---D------PDLFLVQT 274 (802)
T ss_dssp EEEECSSCCSHHHHHHHHHHH-HCCCSEEEECCTTEEECTTHHHHHHHHHHH---S------SSCCEEEC
T ss_pred EEEEecCCCCcchHHHHHHHH-hcCCCEEEEECCCCCcChHHHHHHHHHHhc---C------CCeEEEec
Confidence 56666666 677665555532 126789999999999999999988888754 2 46666664
No 11
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=97.13 E-value=0.0014 Score=65.20 Aligned_cols=110 Identities=13% Similarity=0.087 Sum_probs=76.1
Q ss_pred ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCC-CceEEE-ee
Q 044432 57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKF-GDKFVH-YR 134 (584)
Q Consensus 57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~-g~vtIi-~R 134 (584)
.+.+.|++.+||+.+.+.++|+||.+..|. ...+++|--|++.++ +.+ .++.+.-.. ..++++ ..
T Consensus 47 ~~~vSViIp~yN~~~~l~~~l~sl~~q~~~-~~~eiivVDdgS~D~---------t~~---~~~~~~~~~~~~~~~~~~~ 113 (329)
T 3ckj_A 47 GRTISVVLPALDEEDTIGSVIDSISPLVDG-LVDELIVLDSGSTDD---------TEI---RAVAAGARVVSREQALPEV 113 (329)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHGGGBTT-TBSEEEEEECSCCSS---------HHH---HHHHTTCEEEEHHHHCTTS
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHhhCC-CCcEEEEEeCCCCch---------HHH---HHHHhhhhhccceeeeccC
Confidence 456899999999999999999999997654 245788877776422 222 333331000 011111 26
Q ss_pred cCCcchhHHHhhhccCCCCCceEEEEcCCce-eChhHHHHHHHHHHh
Q 044432 135 TANAGLQAQWLEAWWPTSDHEFAFVVEDDLE-VSPLFYKFLRGLIVN 180 (584)
Q Consensus 135 ~~NlGLa~sIIEgwyPts~~e~VIVLEDDLe-VSP~Fy~Ymn~ALl~ 180 (584)
..|.|.+.+.-.|+--. ..+++++|++|.+ +.|.++.-+..++..
T Consensus 114 ~~n~G~~~a~n~g~~~a-~gd~i~~lD~D~~~~~p~~l~~l~~~l~~ 159 (329)
T 3ckj_A 114 PIRPGKGEALWRSLAAS-RGDIVVFVDSDLINPHPMFVPWLVGPLLT 159 (329)
T ss_dssp CCCCSHHHHHHHHHHHC-CCSEEEECCTTEESCCTTHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHhC-CCCEEEEECCCCCCcChHHHHHHHHHHHh
Confidence 78999988776664222 4689999999999 999999888777643
No 12
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=96.58 E-value=0.00035 Score=77.01 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=0.0
Q ss_pred eEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHH-HHhhccccCCCceEEEeecCC
Q 044432 59 TLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAIL-RFLDGFEWKFGDKFVHYRTAN 137 (584)
Q Consensus 59 ~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrell-k~L~gF~WP~g~vtIi~R~~N 137 (584)
.+.|++.+|||++.+.+||+||.+..+. ..+++|--|++.+++ .+++ ++.+.+ + ..+++++.++|
T Consensus 3 ~vSVIIp~yN~~~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t---------~~il~~~~~~~--~-~~i~~i~~~~n 68 (729)
T 3l7i_A 3 KLTIIVTYYNAEEYITGCLESIKQQRTQ--DFNLIIVNDGSTDQS---------KKLMDEAIKDY--D-KNIRFIDLDEN 68 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHhCCCC--CeEEEEEECCCCCcH---------HHHHHHHHHhC--C-CCEEEEECCCC
Confidence 4789999999999999999999987764 667888888874322 1222 122222 1 36888888899
Q ss_pred cchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHH
Q 044432 138 AGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIV 179 (584)
Q Consensus 138 lGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl 179 (584)
.|++.+.=.|.- ....+++++|++|..+.|.++.-+..++.
T Consensus 69 ~G~~~arN~gi~-~A~gdyI~flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 69 SGHAHARNIALE-EVETPYFMFLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp ------------------------------------------
T ss_pred CCHHHHHHHHHH-hccCCEEEEECCCCCCChhHHHHHHHHhc
Confidence 999777666632 11567999999999999999999888875
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=96.58 E-value=0.0028 Score=65.93 Aligned_cols=110 Identities=10% Similarity=0.037 Sum_probs=77.8
Q ss_pred ceeEEEEEEcCCCchHHHHHHHHHhcC--CCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccc--cCCCceEEE
Q 044432 57 NFTLIIKVLTFNRLNSLSRCLHSLSAA--DYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFE--WKFGDKFVH 132 (584)
Q Consensus 57 ~m~I~IvVfaYNRP~sLkRLL~SL~~A--dY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~--WP~g~vtIi 132 (584)
.+.+.|++.+||+.+.+.+||+||.+. .+. ...+++|--|++.+. +.++ ++.+. .....+.++
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~-~~~EIIVVDDgStD~---------T~~i---~~~~~~~v~~~~~~~i 159 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAP-LIDQILVVDADSEDG---------TAGV---AASHGAEVYSENELMS 159 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSC-CCSEEEEEECSCSSS---------HHHH---HHHTTCEEEEGGGTTG
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCC-CCeEEEEEcCcCCcc---------HHHH---HHHhCchhcccceeEe
Confidence 356899999999999999999999762 332 235788888887532 2333 33331 111122233
Q ss_pred eecCCcchhHHHhhhccCCCCCceEEEEcCCce-eChhHHHHHHHHHHh
Q 044432 133 YRTANAGLQAQWLEAWWPTSDHEFAFVVEDDLE-VSPLFYKFLRGLIVN 180 (584)
Q Consensus 133 ~R~~NlGLa~sIIEgwyPts~~e~VIVLEDDLe-VSP~Fy~Ymn~ALl~ 180 (584)
++..|.|.+.++-.|+--. ..+++++|+.|.. +.|.++.-|-.++..
T Consensus 160 ~~~~n~G~g~A~n~G~~~A-~gd~i~~lDaD~~~~~p~~L~~l~~~l~~ 207 (387)
T 3f1y_A 160 GYGDAHGKGDAMWRALSVT-RGDLVLYIDADTRDFRPQLAYGVLGPVLE 207 (387)
T ss_dssp GGCSCCSHHHHHHHHTTTC-CSSEEEECCTTCSSCCTHHHHTTHHHHHH
T ss_pred cCCccCCHHHHHHHHHHhc-CCCEEEEEcCCCCcCCHHHHHHHHHHHHH
Confidence 4568999999999986322 5789999999999 899999998888855
No 14
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=93.15 E-value=0.089 Score=52.56 Aligned_cols=80 Identities=19% Similarity=0.092 Sum_probs=54.6
Q ss_pred ceeEEEEEEcCCCchHHHHHHHHHh---cCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEe
Q 044432 57 NFTLIIKVLTFNRLNSLSRCLHSLS---AADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHY 133 (584)
Q Consensus 57 ~m~I~IvVfaYNRP~sLkRLL~SL~---~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~ 133 (584)
...+.|++.+|||+++|.++|+||. +..+. ..+++|-=|+. + .+| +. -
T Consensus 64 ~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~--~~EIiVVdds~-----d--------------~~f----~~----a 114 (287)
T 2fy7_A 64 PHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQL--DYGIYVINQAG-----D--------------TIF----NR----A 114 (287)
T ss_dssp SCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC--EEEEEEEEECS-----S--------------SCC----CH----H
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcC--CceEEEEEeCC-----C--------------Ccc----ch----h
Confidence 4679999999999999999999998 33443 44555544421 1 112 10 1
Q ss_pred ecCCcchhHHHhhhccCCCCCceEEEEcCCceeChhH
Q 044432 134 RTANAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLF 170 (584)
Q Consensus 134 R~~NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~F 170 (584)
+..|.|+..++-.+ ..++++++++|+++.|.+
T Consensus 115 ~a~N~G~~~al~~A-----~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 115 KLLNVGFQEALKDY-----DYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp HHHHHHHHHHHHHS-----CCCEEEEECTTEEESBTT
T ss_pred hhhhhHHHHHHHhC-----CCCEEEEECCCcccCCCc
Confidence 23466765443343 578999999999999996
No 15
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=89.89 E-value=1.5 Score=41.76 Aligned_cols=88 Identities=13% Similarity=0.122 Sum_probs=55.7
Q ss_pred ceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEeecC
Q 044432 57 NFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYRTA 136 (584)
Q Consensus 57 ~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R~~ 136 (584)
.|.+.|+ .+||+.+.|++||+||.++-......+++| +|.... + . .++ .+..
T Consensus 15 ~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIV-VDn~s~---d---~----------~g~----------a~a~ 66 (249)
T 2nxv_A 15 TLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLA-ADNREG---N---Q----------FHG----------FSWH 66 (249)
T ss_dssp CCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEE-EECTTS---C---S----------CCT----------TTHH
T ss_pred cceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEE-EECCCC---C---c----------ccH----------HHHH
Confidence 4556664 469999999999999876432221244444 565321 0 0 011 2333
Q ss_pred CcchhHHHhhhccCCCCCceEEEEcCCceeChhHHHHHHHHHHhh
Q 044432 137 NAGLQAQWLEAWWPTSDHEFAFVVEDDLEVSPLFYKFLRGLIVNY 181 (584)
Q Consensus 137 NlGLa~sIIEgwyPts~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y 181 (584)
|.|++.+ ..+++++|.+|+++.|.++.=|..++.+.
T Consensus 67 N~Gi~~A---------~g~yl~fln~D~~~~~~~l~~l~~~~~~~ 102 (249)
T 2nxv_A 67 KQMLPRC---------KGRYVIFCHEDVELVDRGYDDLVAAIEAL 102 (249)
T ss_dssp HHHGGGC---------CSSEEEEEETTEECSSCCHHHHHHHHHHH
T ss_pred HHHHHhc---------CCCEEEEECCCcccCccHHHHHHHHHHhc
Confidence 4554422 46899999999999999998888777653
No 16
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=88.92 E-value=6.4 Score=40.24 Aligned_cols=111 Identities=17% Similarity=0.139 Sum_probs=65.2
Q ss_pred EEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccC-CCceEEEeecCCc
Q 044432 60 LIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWK-FGDKFVHYRTANA 138 (584)
Q Consensus 60 I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP-~g~vtIi~R~~Nl 138 (584)
+-|++-+|+|++.|.|+++.+++..+. + .+.|-=-.+++.. -+ .... .+ -| ...++|+....|
T Consensus 30 FTvvi~ty~R~~~L~~lv~~~~~~~~v-~--~IvVvWn~~~~~p-----p~---~~~~---~~-~~~~vpv~v~~~~~n- 93 (293)
T 1omz_A 30 FTLIMQTYNRTDLLLRLLNHYQAVPSL-H--KVIVVWNNVGEKG-----PE---ELWN---SL-GPHPIPVIFKPQTAN- 93 (293)
T ss_dssp EEEEEEESSCHHHHHHHHHHHTTSTTE-E--EEEEEECCTTCCC-----TH---HHHH---HT-CCCSSCEEEEECSSC-
T ss_pred eEEEEEeecccHHHHHHHHHHhcCCCC-C--eEEEEeCCCCCCC-----Ch---hhcc---cc-CCCCccEEEEeCCCC-
Confidence 455568899999999999999887643 2 3333333322111 01 1111 11 01 124555443333
Q ss_pred chhHHHhhhccCCC--CCceEEEEcCCceeChhHHHHHHHHHHhhcccCCCCCCCcEEEEEe
Q 044432 139 GLQAQWLEAWWPTS--DHEFAFVVEDDLEVSPLFYKFLRGLIVNYYYHAPSNLTRSIYGASL 198 (584)
Q Consensus 139 GLa~sIIEgwyPts--~~e~VIVLEDDLeVSP~Fy~Ymn~ALl~Y~Yd~~~~~sp~V~GISL 198 (584)
.|. .-|+|.. ..+.|+.|+||+.++..=+.|.-..= +..+ .+|.|...
T Consensus 94 sLn----nRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vW---r~~P-----dRlVGf~~ 143 (293)
T 1omz_A 94 KMR----NRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIW---QQFP-----DQIIGFVP 143 (293)
T ss_dssp CGG----GGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHH---TTST-----TSEEESCE
T ss_pred chh----hccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHH---HHCc-----cceecCch
Confidence 454 4466655 57789999999999999877665553 3333 57777643
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=80.86 E-value=7.6 Score=41.32 Aligned_cols=106 Identities=13% Similarity=0.107 Sum_probs=72.8
Q ss_pred CceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccc-cCCCceEEEee
Q 044432 56 SNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFE-WKFGDKFVHYR 134 (584)
Q Consensus 56 ~~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~-WP~g~vtIi~R 134 (584)
+.+.+.|+|.+||=- .+||+++.+.-+. ...+++-.|++. |......+.++.|. +...++.+++
T Consensus 51 i~~klSIVVPvYNEe---~~lLesVl~qi~~--d~eIIlVdDGS~---------D~s~~e~dil~~~~~~~~~ri~viH- 115 (391)
T 2wvl_A 51 VLEQTAIVVPTRNER---LKLLEGVLSGIPH--EALILVASNSSP---------DRFQMERDLLEEFAHLTERPALIFH- 115 (391)
T ss_dssp HHTTEEEEEEESSCC---HHHHHHHHHTSCT--TSEEEEEECCCH---------HHHHHHHHHHHHHHHHTTCCEEEEE-
T ss_pred HHhceEEEEeccCcH---HHHHHHHHhcCCC--CceEEEEECCCC---------CChHhHHHHHHHHHhhcccceEEEe-
Confidence 345589999999944 3689999998654 677888888873 33322233444442 1235677774
Q ss_pred cCCcchhHHHhhhccC--C-----------------------CCCceEEEEcCCceeChhHHHHHHH
Q 044432 135 TANAGLQAQWLEAWWP--T-----------------------SDHEFAFVVEDDLEVSPLFYKFLRG 176 (584)
Q Consensus 135 ~~NlGLa~sIIEgwyP--t-----------------------s~~e~VIVLEDDLeVSP~Fy~Ymn~ 176 (584)
.+|.||+.+.-+..+| . ...++|-.++-|--+....+.|++.
T Consensus 116 Qkn~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~ 182 (391)
T 2wvl_A 116 QKDPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRA 182 (391)
T ss_dssp TTCHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHH
T ss_pred ccChHHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHH
Confidence 8899998887655443 1 0257999999999998777777754
No 18
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=75.51 E-value=7.1 Score=40.94 Aligned_cols=108 Identities=15% Similarity=0.108 Sum_probs=64.3
Q ss_pred EEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhh-ccccCCC-ceEEE--eecC-
Q 044432 62 IKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLD-GFEWKFG-DKFVH--YRTA- 136 (584)
Q Consensus 62 IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~-gF~WP~g-~vtIi--~R~~- 136 (584)
|+|++||. +++.++++.|..+.. ....+++|-=|++++. +.++++-+. ...-..+ .+.++ +|+.
T Consensus 3 lVIiP~~e-E~I~~vl~~l~~~~~-~~~~EIIVVDDGStD~---------T~eia~~la~~~~~~~g~~vi~~~~~r~~~ 71 (397)
T 2bo4_A 3 LVVFPFKH-EHPEVLLHNVRVAAA-HPRVHEVLCIGYERDQ---------TYEAVERAAPEISRATGTPVSVRLQERLGT 71 (397)
T ss_dssp EEEEECCS-SCHHHHHHHHHHHHH-STTCCEEEEEESSCCH---------HHHHHHHHHHHHHHHHSCCEEEEECCCCSS
T ss_pred EEEEeCCc-cCHHHHHHHHHHhcc-CCCeEEEEEECcCCcc---------HHHHHHHhhhhcccccCCeEEEEecccCCC
Confidence 45555653 689999998863211 1134676666776532 233333111 1100002 23222 2334
Q ss_pred -CcchhHHHhhhc-cC--CCCCceEEEEcCCce-eChhHHHHHHHHHHh
Q 044432 137 -NAGLQAQWLEAW-WP--TSDHEFAFVVEDDLE-VSPLFYKFLRGLIVN 180 (584)
Q Consensus 137 -NlGLa~sIIEgw-yP--ts~~e~VIVLEDDLe-VSP~Fy~Ymn~ALl~ 180 (584)
|.|...++..|+ |. ....+.+++++-|+. ..|.++.=|-..+..
T Consensus 72 ~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~ 120 (397)
T 2bo4_A 72 LRPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF 120 (397)
T ss_dssp SSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc
Confidence 899999999996 21 235779999999997 899998888777643
No 19
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=52.76 E-value=38 Score=35.21 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=58.9
Q ss_pred CCceeEEEEEEcCCCchHHHHHHHHHhcCCCCCCceeEEEEecCCCCCcCCCcchhhHHHHHHHhhccccCCCceEEEee
Q 044432 55 SSNFTLIIKVLTFNRLNSLSRCLHSLSAADYLTDRVHLHVYVDHSAPLADQSSSESDSRAILRFLDGFEWKFGDKFVHYR 134 (584)
Q Consensus 55 ~~~m~I~IvVfaYNRP~sLkRLL~SL~~AdY~gd~v~L~IflD~pk~~s~~~~kVdevrellk~L~gF~WP~g~vtIi~R 134 (584)
+..|.|+..+.+++.++.+.|+|++|-.-+ -..+|++|...+ .+...++.+..+.| +++.|..+
T Consensus 81 e~~~kiAflil~h~d~~~l~rll~~ly~p~-----n~y~IHvD~ks~-------~~~~~~~~~~~~~f----~NV~v~~~ 144 (391)
T 2gak_A 81 EVGFPIAYSIVVHHKIEMLDRLLRAIYMPQ-----NFYCIHVDRKAE-------ESFLAAVQGIASCF----DNVFVASQ 144 (391)
T ss_dssp HHTSCEEEEEEECSCHHHHHHHHHHHCCTT-----SEEEEEECTTSC-------HHHHHHHHHHHHTC----TTEEECSS
T ss_pred ccCCCEEEEEEecCCHHHHHHHHHHHhCCC-----CeEEEEEeCCCC-------HHHHHHHHHHHhcC----CCEEEecc
Confidence 345788999999999999999999994322 247899997532 11112222344545 68887632
Q ss_pred cCC---cc---------hhHHHhhhccCCCCCceEEEEcCCceeChhH
Q 044432 135 TAN---AG---------LQAQWLEAWWPTSDHEFAFVVEDDLEVSPLF 170 (584)
Q Consensus 135 ~~N---lG---------La~sIIEgwyPts~~e~VIVLEDDLeVSP~F 170 (584)
... +| |....++. ..+.+++|.|..+..+=-.+
T Consensus 145 ~~~v~WGg~S~v~A~l~ll~~aL~~---~~~w~yfilLSgsD~PLkt~ 189 (391)
T 2gak_A 145 LESVVYASWTRVKADLNCMKDLYRM---NANWKYLINLCGMDFPIKTN 189 (391)
T ss_dssp CCCCCTTSHHHHHHHHHHHHHHHHH---CSCCCEEEEEETTCEESSCH
T ss_pred CcccccCCchHHHHHHHHHHHHHhc---CCCCCEEEEecCCCccccCH
Confidence 222 22 12233332 12578999998877764433
No 20
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=43.66 E-value=57 Score=29.09 Aligned_cols=17 Identities=12% Similarity=0.233 Sum_probs=13.4
Q ss_pred HHHhhhcCcceEEEecc
Q 044432 422 IKKCLEYRYSAWVVDAN 438 (584)
Q Consensus 422 i~kc~~~~y~~~~~~~~ 438 (584)
|++.++.|.+.|++||.
T Consensus 88 i~~~l~~g~~~~i~dg~ 104 (203)
T 1ukz_A 88 ISDNVKANKHKFLIDGF 104 (203)
T ss_dssp HHHHHHTTCCEEEEETC
T ss_pred HHhhhccCCCeEEEeCC
Confidence 45677788889999985
No 21
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=30.12 E-value=23 Score=38.37 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=25.3
Q ss_pred HHHHHHH-HHHHhhhcCcceEEEecceeeccC
Q 044432 414 EVLVKVY-VIKKCLEYRYSAWVVDANFLPFSN 444 (584)
Q Consensus 414 ~~~~~~~-vi~kc~~~~y~~~~~~~~~~~~~~ 444 (584)
+.+.+++ .|++|++.||.+-++||+|+++..
T Consensus 108 ~am~~a~e~i~~aI~AGFtSVMiD~S~~p~ee 139 (450)
T 3txv_A 108 EAMAKAEAMITAYAKAGFTKLHLDTSMGCAGE 139 (450)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCCBCCSSS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCCCCchhh
Confidence 4455554 478899999999999999998865
No 22
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=26.38 E-value=23 Score=35.88 Aligned_cols=22 Identities=18% Similarity=0.458 Sum_probs=19.0
Q ss_pred HHHhhhcCcceEEEecceeecc
Q 044432 422 IKKCLEYRYSAWVVDANFLPFS 443 (584)
Q Consensus 422 i~kc~~~~y~~~~~~~~~~~~~ 443 (584)
|++|++.||++-|+||+.+++.
T Consensus 90 i~~ai~~GFtSVMiDgS~lp~e 111 (286)
T 1gvf_A 90 IRRKVHAGVRSAMIDGSHFPFA 111 (286)
T ss_dssp HHHHHHTTCCEEEECCTTSCHH
T ss_pred HHHHHHcCCCeEEECCCCCCHH
Confidence 6779999999999999987653
No 23
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=24.86 E-value=1.3e+02 Score=27.49 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=21.8
Q ss_pred ceeEeecCCch----hhhhhhhC-CCcccchhHHHhh
Q 044432 364 QNHIFLGSHSD----FLYDLARR-GHPVIDADQFLND 395 (584)
Q Consensus 364 ~n~~~~~~~~~----~~~dl~~~-g~~~i~~~~~~~~ 395 (584)
.+.+|.|.+-- ...-||.+ |.++|++|+++..
T Consensus 6 ~~I~l~G~~GsGKsT~a~~La~~l~~~~i~~d~li~~ 42 (217)
T 3be4_A 6 HNLILIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLRE 42 (217)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHHCCEEEEHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCceEEehhHHHHH
Confidence 34566666543 55566654 9999999988864
No 24
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=24.00 E-value=26 Score=35.65 Aligned_cols=22 Identities=23% Similarity=0.557 Sum_probs=19.2
Q ss_pred HHHhhhcCcceEEEecceeecc
Q 044432 422 IKKCLEYRYSAWVVDANFLPFS 443 (584)
Q Consensus 422 i~kc~~~~y~~~~~~~~~~~~~ 443 (584)
|++|++.||++-|+||+.+++.
T Consensus 96 i~~ai~~GFtSVMiDgS~~p~e 117 (288)
T 3q94_A 96 CKEAIDAGFTSVMIDASHHPFE 117 (288)
T ss_dssp HHHHHHHTCSEEEECCTTSCHH
T ss_pred HHHHHHcCCCeEEEeCCCCCHH
Confidence 5789999999999999988654
No 25
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=22.05 E-value=47 Score=28.80 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=26.5
Q ss_pred CcceeEeecCCch----hhhhhhhC-CCcccchhHHHhh
Q 044432 362 NSQNHIFLGSHSD----FLYDLARR-GHPVIDADQFLND 395 (584)
Q Consensus 362 ~~~n~~~~~~~~~----~~~dl~~~-g~~~i~~~~~~~~ 395 (584)
.|+|.++.|.+-- +..-||.+ |.|+||+|++...
T Consensus 6 ~~~~i~l~G~~GsGKSTva~~La~~lg~~~id~D~~~~~ 44 (168)
T 1zuh_A 6 HMQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISE 44 (168)
T ss_dssp --CEEEEESCTTSSHHHHHHHHHHHHTCCEEEHHHHHHH
T ss_pred ccceEEEECCCCCCHHHHHHHHHHHhCCCEEEChHHHHH
Confidence 5789999888753 77788886 9999999998864
No 26
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=21.41 E-value=1.8e+02 Score=25.07 Aligned_cols=72 Identities=8% Similarity=0.023 Sum_probs=36.9
Q ss_pred ceeEeecCCch----hhhhhhhC-CCcccchhHHHhh--hhh-hhhccccCCchHHHHHHHHHHHHHHHhhhcCcceEEE
Q 044432 364 QNHIFLGSHSD----FLYDLARR-GHPVIDADQFLND--IRA-YESLSLQSSDARLTKEVLVKVYVIKKCLEYRYSAWVV 435 (584)
Q Consensus 364 ~n~~~~~~~~~----~~~dl~~~-g~~~i~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~vi~kc~~~~y~~~~~ 435 (584)
..++++|++-- +..-|+++ |.++||+|.+... ++. ..-+.+|. .+.....-+...+++.+++.|. .+|+
T Consensus 9 ~~i~l~G~~GsGKSTl~~~l~~~~g~~~i~~d~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~vi 85 (175)
T 1knq_A 9 HIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLND--DDRKPWLQALNDAAFAMQRTNK-VSLI 85 (175)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHTCEEEEGGGGCCHHHHHHHHTTCCCCH--HHHHHHHHHHHHHHHHHHHHCS-EEEE
T ss_pred cEEEEEcCCCCCHHHHHHHHHHhhCcEEEeCccccchHHHHHhhcCcCCCc--cccccHHHHHHHHHHHHHhcCC-cEEE
Confidence 45666776644 55566654 8888888887532 111 11122232 1111111122335666776664 5788
Q ss_pred ecc
Q 044432 436 DAN 438 (584)
Q Consensus 436 ~~~ 438 (584)
|+.
T Consensus 86 ~~~ 88 (175)
T 1knq_A 86 VCS 88 (175)
T ss_dssp ECC
T ss_pred EeC
Confidence 854
No 27
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=21.24 E-value=31 Score=35.41 Aligned_cols=22 Identities=18% Similarity=0.409 Sum_probs=19.0
Q ss_pred HHHhhhcCcceEEEecceeecc
Q 044432 422 IKKCLEYRYSAWVVDANFLPFS 443 (584)
Q Consensus 422 i~kc~~~~y~~~~~~~~~~~~~ 443 (584)
|++|++.||++-|+||+.+++.
T Consensus 90 ~~~ai~~GFtSVMiDgS~~p~e 111 (307)
T 3n9r_A 90 CEKAVKAGFTSVMIDASHHAFE 111 (307)
T ss_dssp HHHHHHHTCSEEEECCTTSCHH
T ss_pred HHHHHHhCCCcEEEECCCCCHH
Confidence 4679999999999999988654
No 28
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=21.04 E-value=2.4e+02 Score=24.21 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=20.9
Q ss_pred ceeEeecCCch----hhhhhhhC-CCcccchhHHHhhh
Q 044432 364 QNHIFLGSHSD----FLYDLARR-GHPVIDADQFLNDI 396 (584)
Q Consensus 364 ~n~~~~~~~~~----~~~dl~~~-g~~~i~~~~~~~~~ 396 (584)
+..+|.|.+-- +..-||.+ |.++||+|+++...
T Consensus 7 ~~I~l~G~~GsGKsT~~~~L~~~l~~~~i~~d~~~~~~ 44 (194)
T 1qf9_A 7 NVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQE 44 (194)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHCCEEEEHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEeeHHHHHHHH
Confidence 34555665532 55566665 88888888876643
No 29
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=20.89 E-value=36 Score=35.23 Aligned_cols=22 Identities=27% Similarity=0.629 Sum_probs=19.2
Q ss_pred HHHhhhcCcceEEEecceeecc
Q 044432 422 IKKCLEYRYSAWVVDANFLPFS 443 (584)
Q Consensus 422 i~kc~~~~y~~~~~~~~~~~~~ 443 (584)
|++|++.||++-|+||+.+++.
T Consensus 91 i~~ai~~GFtSVMiDgS~~p~e 112 (323)
T 2isw_A 91 VKMAIDLGFSSVMIDASHHPFD 112 (323)
T ss_dssp HHHHHHTTCSEEEECCTTSCHH
T ss_pred HHHHHHcCCCeEEecCCCCCHH
Confidence 6789999999999999977653
No 30
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=20.38 E-value=33 Score=32.96 Aligned_cols=39 Identities=21% Similarity=0.202 Sum_probs=28.2
Q ss_pred hhhcccCcceeEeecCCchhhhhhhhCCCcccchhHHHhh
Q 044432 356 CQFERINSQNHIFLGSHSDFLYDLARRGHPVIDADQFLND 395 (584)
Q Consensus 356 ~~~~~~~~~n~~~~~~~~~~~~dl~~~g~~~i~~~~~~~~ 395 (584)
.||-..|+--.|=+|+. -+..-|+..|.||||+|++...
T Consensus 7 ~~~~~iglTGgigsGKS-tv~~~l~~~g~~vidaD~ia~~ 45 (210)
T 4i1u_A 7 HHMYAIGLTGGIGSGKT-TVADLFAARGASLVDTDLIAHR 45 (210)
T ss_dssp CSCCEEEEECCTTSCHH-HHHHHHHHTTCEEEEHHHHHHH
T ss_pred cceeEEEEECCCCCCHH-HHHHHHHHCCCcEEECcHHHHH
Confidence 35666666666666663 4566678899999999997653
Done!