Query 044439
Match_columns 121
No_of_seqs 104 out of 2958
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 05:12:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044439.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044439hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 6.2E-23 2.1E-27 123.3 9.4 104 5-115 36-139 (169)
2 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.8E-22 6E-27 110.1 9.3 92 6-104 2-93 (93)
3 3c5r_A BARD-1, BRCA1-associate 99.9 2.1E-22 7.1E-27 116.8 10.0 110 3-119 7-116 (137)
4 3aaa_C Myotrophin, protein V-1 99.9 1.4E-22 4.6E-27 115.7 8.8 107 5-118 6-112 (123)
5 4gpm_A Engineered protein OR26 99.9 3.7E-22 1.3E-26 119.9 10.9 97 4-107 68-164 (169)
6 3twr_A Tankyrase-2; ankyrin re 99.9 1.8E-21 6.2E-26 115.9 11.5 107 6-119 42-148 (165)
7 2jab_A H10-2-G3; HER2, darpin, 99.9 3E-21 1E-25 111.9 10.3 105 5-116 13-117 (136)
8 3f6q_A Integrin-linked protein 99.9 4.1E-21 1.4E-25 115.8 11.1 109 4-119 37-145 (179)
9 1d9s_A Cyclin-dependent kinase 99.9 1.5E-21 5.2E-26 113.1 7.9 105 4-116 10-115 (136)
10 1oy3_D Transcription factor in 99.9 4.3E-21 1.5E-25 122.4 10.2 110 4-119 156-265 (282)
11 2l6b_A NR1C; ankyrin, consensu 99.9 4.4E-22 1.5E-26 112.2 4.9 106 3-115 6-111 (115)
12 1awc_B Protein (GA binding pro 99.9 6.6E-21 2.3E-25 112.3 10.0 105 4-115 32-136 (153)
13 3ehr_A Osteoclast-stimulating 99.9 1.1E-21 3.7E-26 122.0 6.9 108 5-118 72-179 (222)
14 4b93_B Ankyrin repeat domain-c 99.9 5.7E-21 2E-25 122.2 9.8 109 4-119 84-225 (269)
15 3v30_A DNA-binding protein rfx 99.8 1.6E-20 5.4E-25 112.5 10.5 105 4-115 34-138 (172)
16 3v31_A Ankyrin repeat family A 99.8 2.4E-20 8.1E-25 111.2 10.9 104 5-115 35-138 (167)
17 3deo_A Signal recognition part 99.8 2.1E-20 7.1E-25 113.2 10.5 103 6-116 44-147 (183)
18 2y1l_E Darpin-8.4; hydrolase-i 99.8 3.8E-20 1.3E-24 110.7 10.9 104 5-115 46-149 (169)
19 3twr_A Tankyrase-2; ankyrin re 99.8 2E-20 6.8E-25 111.4 9.4 109 1-115 3-111 (165)
20 1n0r_A 4ANK, 4 ankyrin repeats 99.8 4.6E-20 1.6E-24 104.9 10.3 103 6-115 2-104 (126)
21 2vge_A RELA-associated inhibit 99.8 2.9E-20 9.8E-25 116.4 10.1 107 6-119 21-128 (229)
22 2dzn_A Probable 26S proteasome 99.8 3.7E-20 1.3E-24 115.0 10.3 110 4-119 105-215 (228)
23 2rfm_A Putative ankyrin repeat 99.8 5.2E-20 1.8E-24 112.0 10.5 101 6-113 68-168 (192)
24 1k1a_A B-cell lymphoma 3-encod 99.8 1E-19 3.4E-24 113.8 12.1 110 4-119 114-223 (241)
25 1ycs_B 53BP2, P53BP2; ankyrin 99.8 4.1E-20 1.4E-24 116.1 10.2 101 6-113 37-137 (239)
26 3ui2_A Signal recognition part 99.8 4.3E-20 1.5E-24 116.5 9.9 103 6-116 45-148 (244)
27 2rfm_A Putative ankyrin repeat 99.8 8E-20 2.7E-24 111.2 10.4 105 4-115 33-137 (192)
28 3v31_A Ankyrin repeat family A 99.8 9E-20 3.1E-24 108.7 9.9 103 6-115 3-105 (167)
29 1bi7_B P16INK4A, MTS1, multipl 99.8 1.8E-20 6.3E-25 110.8 6.6 100 5-112 11-111 (156)
30 1ihb_A P18-INK4C(INK6), cyclin 99.8 1E-19 3.4E-24 107.9 9.8 102 5-114 37-139 (162)
31 1bi7_B P16INK4A, MTS1, multipl 99.8 6E-21 2.1E-25 112.9 4.3 106 4-117 43-149 (156)
32 3v30_A DNA-binding protein rfx 99.8 2.2E-19 7.6E-24 107.4 10.4 103 7-115 3-105 (172)
33 1ikn_D Protein (I-kappa-B-alph 99.8 3.6E-19 1.2E-23 111.3 11.6 110 4-119 76-191 (236)
34 2y1l_E Darpin-8.4; hydrolase-i 99.8 2.6E-19 9E-24 107.0 10.5 103 6-115 14-116 (169)
35 4b93_B Ankyrin repeat domain-c 99.8 8.4E-20 2.9E-24 116.8 8.5 104 5-114 51-187 (269)
36 1yyh_A HN1;, notch 1, ankyrin 99.8 1.8E-19 6E-24 113.9 9.9 104 5-115 123-226 (253)
37 3aji_A 26S proteasome non-ATPa 99.8 1.5E-19 5.1E-24 112.5 9.2 106 5-117 105-210 (231)
38 2xai_A ASB-9, ankyrin repeat a 99.8 3.5E-19 1.2E-23 113.1 11.0 106 6-119 101-206 (261)
39 3f6q_A Integrin-linked protein 99.8 2.4E-19 8.3E-24 108.0 9.5 104 6-115 5-108 (179)
40 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.4E-19 4.7E-24 107.3 8.2 104 4-115 3-106 (162)
41 2jab_A H10-2-G3; HER2, darpin, 99.8 2.7E-19 9.2E-24 103.6 9.3 92 4-102 45-136 (136)
42 2rfa_A Transient receptor pote 99.8 6.8E-19 2.3E-23 109.7 11.6 106 4-115 35-157 (232)
43 1awc_B Protein (GA binding pro 99.8 2.3E-19 8E-24 105.6 8.9 102 6-115 2-103 (153)
44 3aji_A 26S proteasome non-ATPa 99.8 7E-19 2.4E-23 109.5 11.5 107 1-113 1-107 (231)
45 1n0r_A 4ANK, 4 ankyrin repeats 99.8 4.9E-19 1.7E-23 100.6 9.8 94 4-104 33-126 (126)
46 1d9s_A Cyclin-dependent kinase 99.8 3.7E-20 1.3E-24 107.2 5.0 93 4-104 43-136 (136)
47 1s70_B 130 kDa myosin-binding 99.8 2.6E-19 8.7E-24 115.2 9.3 104 6-116 40-143 (299)
48 2f8y_A Notch homolog 1, transl 99.8 8E-19 2.7E-23 108.7 10.9 101 6-113 92-192 (223)
49 3hra_A Ankyrin repeat family p 99.8 6E-19 2.1E-23 107.7 10.2 97 7-109 40-137 (201)
50 3b7b_A Euchromatic histone-lys 99.8 3.5E-19 1.2E-23 111.2 9.3 105 5-116 110-214 (237)
51 2etb_A Transient receptor pote 99.8 9.1E-20 3.1E-24 115.3 6.1 107 4-116 88-225 (256)
52 1dcq_A PYK2-associated protein 99.8 7.2E-19 2.5E-23 113.0 10.1 95 4-105 167-264 (278)
53 2etb_A Transient receptor pote 99.8 8.4E-19 2.9E-23 110.8 10.3 108 3-116 40-176 (256)
54 1bd8_A P19INK4D CDK4/6 inhibit 99.8 5.8E-19 2E-23 104.0 9.0 98 6-112 36-133 (156)
55 3jxi_A Vanilloid receptor-rela 99.8 7.8E-20 2.7E-24 115.7 5.5 105 5-115 92-228 (260)
56 3d9h_A CDNA FLJ77766, highly s 99.8 9.1E-19 3.1E-23 112.6 10.5 106 6-119 157-262 (285)
57 1s70_B 130 kDa myosin-binding 99.8 1.5E-18 5.2E-23 111.6 11.4 75 39-119 198-272 (299)
58 3hra_A Ankyrin repeat family p 99.8 1.2E-18 4E-23 106.4 10.4 107 4-115 70-181 (201)
59 2f8y_A Notch homolog 1, transl 99.8 1.5E-18 5E-23 107.5 10.8 98 6-109 25-122 (223)
60 3utm_A Tankyrase-1; tankyrase, 99.8 1.7E-18 5.8E-23 113.1 11.4 105 4-115 56-160 (351)
61 2xai_A ASB-9, ankyrin repeat a 99.8 8.6E-19 3E-23 111.3 9.7 95 6-107 3-97 (261)
62 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.3E-18 4.4E-23 102.5 9.8 101 7-115 3-104 (156)
63 4hbd_A KN motif and ankyrin re 99.8 1.2E-18 4.2E-23 111.6 10.3 108 3-116 108-254 (276)
64 1yyh_A HN1;, notch 1, ankyrin 99.8 8.7E-19 3E-23 110.8 9.3 69 39-113 123-191 (253)
65 3ljn_A Hypothetical protein; a 99.8 4.6E-19 1.6E-23 117.0 8.3 104 5-115 137-247 (364)
66 1n11_A Ankyrin; clathrin, BAND 99.8 1.2E-18 4E-23 117.5 10.3 104 5-115 277-380 (437)
67 2rfa_A Transient receptor pote 99.8 2.6E-18 9E-23 107.0 10.9 99 6-110 3-106 (232)
68 3lvq_E ARF-GAP with SH3 domain 99.8 8.6E-19 2.9E-23 120.3 9.2 100 4-110 169-271 (497)
69 3kea_A K1L; tropism, ANK repea 99.8 1E-18 3.5E-23 112.4 9.0 100 4-112 29-128 (285)
70 1sw6_A Regulatory protein SWI6 99.8 2.1E-18 7.2E-23 112.8 10.5 115 4-119 129-323 (327)
71 2pnn_A Transient receptor pote 99.8 3.5E-18 1.2E-22 108.9 11.2 108 3-116 51-188 (273)
72 2pnn_A Transient receptor pote 99.8 3.5E-19 1.2E-23 113.6 6.4 98 4-107 99-221 (273)
73 2zgd_A 3 repeat synthetic anky 99.8 1.5E-18 5E-23 97.3 8.2 88 4-98 22-109 (110)
74 3jue_A Arfgap with coiled-coil 99.8 4.4E-19 1.5E-23 117.9 7.0 104 7-116 200-305 (368)
75 2dzn_A Probable 26S proteasome 99.8 2.6E-18 9E-23 106.6 10.1 101 6-113 72-175 (228)
76 1n11_A Ankyrin; clathrin, BAND 99.8 1.6E-18 5.4E-23 116.8 9.7 104 4-114 12-115 (437)
77 3d9h_A CDNA FLJ77766, highly s 99.8 2.8E-18 9.6E-23 110.3 10.4 99 4-109 57-155 (285)
78 1dcq_A PYK2-associated protein 99.8 1.4E-18 4.7E-23 111.6 8.8 106 8-116 132-242 (278)
79 2b0o_E UPLC1; arfgap, structur 99.8 1E-18 3.6E-23 113.3 8.1 106 8-116 153-263 (301)
80 3utm_A Tankyrase-1; tankyrase, 99.8 1.5E-18 5.2E-23 113.3 8.9 106 4-116 209-317 (351)
81 3lvq_E ARF-GAP with SH3 domain 99.8 6.3E-19 2.1E-23 121.0 7.2 104 8-117 134-245 (497)
82 1ikn_D Protein (I-kappa-B-alph 99.8 2.6E-18 8.9E-23 107.4 9.1 106 4-115 43-154 (236)
83 3b7b_A Euchromatic histone-lys 99.8 4.9E-18 1.7E-22 106.0 10.1 97 8-110 46-142 (237)
84 4hbd_A KN motif and ankyrin re 99.8 1.4E-18 4.8E-23 111.3 7.7 93 4-102 181-273 (276)
85 1wdy_A 2-5A-dependent ribonucl 99.8 7.3E-18 2.5E-22 107.2 10.8 96 8-109 7-102 (285)
86 3jxi_A Vanilloid receptor-rela 99.8 3.2E-18 1.1E-22 108.3 9.0 107 4-116 44-180 (260)
87 1wdy_A 2-5A-dependent ribonucl 99.8 6.5E-18 2.2E-22 107.5 10.3 96 7-108 183-282 (285)
88 1oy3_D Transcription factor in 99.8 4.4E-18 1.5E-22 108.4 9.0 98 3-107 6-106 (282)
89 2fo1_E LIN-12 protein; beta-ba 99.8 5.6E-18 1.9E-22 112.5 9.6 107 4-115 233-349 (373)
90 2vge_A RELA-associated inhibit 99.8 2.6E-19 8.8E-24 112.1 2.9 101 4-111 52-155 (229)
91 2b0o_E UPLC1; arfgap, structur 99.7 5E-18 1.7E-22 110.2 8.1 94 4-104 188-284 (301)
92 3eu9_A Huntingtin-interacting 99.7 2.4E-17 8.3E-22 102.6 10.9 102 5-112 41-142 (240)
93 3ljn_A Hypothetical protein; a 99.7 3.5E-17 1.2E-21 108.0 12.1 108 5-116 83-215 (364)
94 1k1a_A B-cell lymphoma 3-encod 99.7 2.1E-17 7E-22 103.2 10.4 93 4-103 7-103 (241)
95 4g8k_A 2-5A-dependent ribonucl 99.7 2.8E-17 9.6E-22 107.5 11.3 101 6-111 25-157 (337)
96 3t8k_A Uncharacterized protein 99.7 1.7E-19 5.8E-24 109.8 0.7 102 8-113 8-115 (186)
97 1ycs_B 53BP2, P53BP2; ankyrin 99.7 1.9E-18 6.4E-23 108.6 4.9 105 4-116 3-107 (239)
98 3t8k_A Uncharacterized protein 99.7 4.5E-18 1.5E-22 103.5 6.1 111 5-117 37-159 (186)
99 3kea_A K1L; tropism, ANK repea 99.7 1.6E-17 5.6E-22 106.8 8.8 97 7-111 96-193 (285)
100 3eu9_A Huntingtin-interacting 99.7 3.3E-17 1.1E-21 102.0 9.5 104 5-114 8-111 (240)
101 3ehr_A Osteoclast-stimulating 99.7 2E-18 6.8E-23 107.2 3.7 104 4-114 104-208 (222)
102 4g8k_A 2-5A-dependent ribonucl 99.7 2E-17 7E-22 108.2 8.7 93 5-109 238-331 (337)
103 3jue_A Arfgap with coiled-coil 99.7 4.1E-17 1.4E-21 108.5 9.0 94 4-104 233-326 (368)
104 1sw6_A Regulatory protein SWI6 99.7 2E-17 6.8E-22 108.2 7.2 101 9-115 100-204 (327)
105 2fo1_E LIN-12 protein; beta-ba 99.7 3.6E-17 1.2E-21 108.7 8.4 93 5-104 278-371 (373)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.7 2.4E-16 8.1E-21 85.6 8.2 72 39-116 1-72 (93)
107 3deo_A Signal recognition part 99.7 2E-16 6.9E-21 95.6 7.8 81 4-90 74-154 (183)
108 3ui2_A Signal recognition part 99.7 2.1E-16 7.1E-21 99.6 8.1 94 4-103 75-184 (244)
109 3c5r_A BARD-1, BRCA1-associate 99.7 1.5E-17 5.1E-22 96.2 1.0 93 4-103 41-133 (137)
110 3aaa_C Myotrophin, protein V-1 99.6 1.4E-15 4.7E-20 86.4 8.0 79 4-89 38-116 (123)
111 2aja_A Ankyrin repeat family p 99.6 6.4E-16 2.2E-20 103.0 4.0 91 7-106 93-190 (376)
112 2aja_A Ankyrin repeat family p 99.6 4.3E-16 1.5E-20 103.8 2.5 89 7-103 129-223 (376)
113 2zgd_A 3 repeat synthetic anky 99.5 2.3E-14 8E-19 79.9 6.9 72 38-115 22-93 (110)
114 2l6b_A NR1C; ankyrin, consensu 99.5 2.7E-14 9.1E-19 80.1 5.5 74 37-116 6-79 (115)
115 1gp8_A Protein (scaffolding pr 83.6 0.96 3.3E-05 19.7 2.0 19 8-26 15-33 (40)
116 3zrh_A Ubiquitin thioesterase 27.8 1.5E+02 0.0052 20.5 5.3 27 76-102 66-92 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=6.2e-23 Score=123.34 Aligned_cols=104 Identities=20% Similarity=0.252 Sum_probs=63.0
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...||||.|+..++.++++.+++.+......+. .|.||||+|+..+ +.+++++|++. +.+++.++..|.||||
T Consensus 36 ~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~-~g~TpLh~A~~~g-----~~~~v~~Ll~~-gadvn~~d~~G~TpLh 108 (169)
T 4gpm_A 36 DGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAENG-----HKEVVKLLISK-GADVNAKDSDGRTPLH 108 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhhhcc-CCCCHHHHHHHcC-----CHHHHHHHHHC-cCCCCCCCCCCCCHHH
Confidence 345666666666666666666665443333333 5666666666665 46666666665 4455556666666666
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
+|+..|+.+++++|+++|++++..+..+.++
T Consensus 109 ~A~~~g~~~~v~~Ll~~gad~~~~d~~G~Tp 139 (169)
T 4gpm_A 109 HAAENGHKEVVKLLISKGADVNTSDSDGRTP 139 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 6666666666666666666666655554443
No 2
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.8e-22 Score=110.09 Aligned_cols=92 Identities=23% Similarity=0.267 Sum_probs=81.6
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..||||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNG-----HLEVVKLLLEA-GADVNAKDKNGRTPLHL 74 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCccCCCCCCHHHH
Confidence 56899999999999999999988655544444 8999999999998 69999999998 66778889999999999
Q ss_pred HHHhCCHHHHHHHHHhCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKS 104 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~ 104 (121)
|+..|+.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999984
No 3
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=2.1e-22 Score=116.78 Aligned_cols=110 Identities=23% Similarity=0.188 Sum_probs=95.8
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcH
Q 044439 3 PVSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTP 82 (121)
Q Consensus 3 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tp 82 (121)
+....++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~~~~Ll~~-g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDH-AGWTPLHEACNHG-----HLKVVELLLQH-KALVNTTGYQNDSP 79 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCGGGCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCcccCcCCCCCCH
Confidence 35678999999999999999999988554444444 7999999999988 69999999998 66778889999999
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCCC
Q 044439 83 LQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 83 L~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 119 (121)
||+|+..|+.+++++|+++|++++..+..+.++..++
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A 116 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYT 116 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999888888776654
No 4
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=1.4e-22 Score=115.67 Aligned_cols=107 Identities=15% Similarity=0.119 Sum_probs=92.1
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
..+++||.|+..|+.+.++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLE-GGRKPLHYAADCG-----QLEILEFLLLK-GADINAPDKHHITPLL 78 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCT-TSSCHHHHHHHTT-----CHHHHHHHHTT-TCCTTCCCTTSCCHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCC-CCCcHHHHHHHcC-----CHHHHHHHHHc-CCCCCcCCCCCCCHHH
Confidence 356899999999999999999988654444444 7999999999988 69999999988 6777888999999999
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKL 118 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~ 118 (121)
+|+..|+.+++++|+++|++++..+..+.++..+
T Consensus 79 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 112 (123)
T 3aaa_C 79 SAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEA 112 (123)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 9999999999999999999999888777665443
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.88 E-value=3.7e-22 Score=119.93 Aligned_cols=97 Identities=21% Similarity=0.252 Sum_probs=68.0
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....||||+|+..|+.++++.|++.+......+. .|+||||+|+..+ +.+++++|++. +.+.+.++..|.|||
T Consensus 68 ~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~-~G~TpLh~A~~~g-----~~~~v~~Ll~~-gad~~~~d~~G~TpL 140 (169)
T 4gpm_A 68 SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAENG-----HKEVVKLLISK-GADVNTSDSDGRTPL 140 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCccccCCCCCCHH
Confidence 3456778888888888888888777554444444 6788888888777 57888888877 556667778888888
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQH 107 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~ 107 (121)
++|+..|+.+++++|+++||+++.
T Consensus 141 ~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 141 DLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHTTCHHHHHHHHTC------
T ss_pred HHHHHcCCHHHHHHHHHCCCCcCC
Confidence 888888888888888888886643
No 6
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=1.8e-21 Score=115.86 Aligned_cols=107 Identities=16% Similarity=0.093 Sum_probs=91.0
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 114 (165)
T 3twr_A 42 QSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK-GGLVPLHNACSYG-----HYEVAELLVKH-GAVVNVADLWKFTPLHE 114 (165)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred CCCHHHHHHHcChHHHHHHHHhcCCCCCccCC-CCCCHHHHHHHcC-----cHHHHHHHHhC-CCCCCCcCCCCCCHHHH
Confidence 45899999999999999999988655444444 7899999999988 59999999998 66777889999999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 119 (121)
|+..|+.+++++|+++|++++..+..+.++..+.
T Consensus 115 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a 148 (165)
T 3twr_A 115 AAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV 148 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGS
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhH
Confidence 9999999999999999999998888877776553
No 7
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=3e-21 Score=111.87 Aligned_cols=105 Identities=22% Similarity=0.248 Sum_probs=90.6
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...++||+|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~d~~g~t~L~ 85 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDE-YGLTPLYLATAHG-----HLEIVEVLLKN-GADVNAVDAIGFTPLH 85 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTCCCHHH
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCcCCCCCCCHHH
Confidence 356889999999999999999998654444444 7999999999998 69999999998 6677788999999999
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
+|+..|+.+++++|+++|++++..+..+.+..
T Consensus 86 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl 117 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLKHGADVNAQDKFGKTAF 117 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHH
Confidence 99999999999999999999988777665543
No 8
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.86 E-value=4.1e-21 Score=115.80 Aligned_cols=109 Identities=17% Similarity=0.224 Sum_probs=93.0
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....++||.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 37 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~d~~g~t~L 109 (179)
T 3f6q_A 37 DHGFSPLHWACREGRSAVVEMLIMRGARINVMNR-GDDTPLHLAASHG-----HRDIVQKLLQY-KADINAVNEHGNVPL 109 (179)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCccCCCCCCHH
Confidence 3466899999999999999999988655544444 7899999999988 59999999998 667778899999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 119 (121)
|+|+..|+.+++++|+++|++++..+..+..+..++
T Consensus 110 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A 145 (179)
T 3f6q_A 110 HYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKA 145 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGS
T ss_pred HHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHH
Confidence 999999999999999999999998888887766543
No 9
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=1.5e-21 Score=113.09 Aligned_cols=105 Identities=17% Similarity=0.101 Sum_probs=90.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCC-CCcH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAK-GDTP 82 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~-~~tp 82 (121)
....++||.|+..|+.++++.|++.+........ .|.||||+|+. + +.+++++|++. +...+..+.. |.||
T Consensus 10 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~-~-----~~~~v~~Ll~~-g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 10 GSSDAGLATAAARGQVETVRQLLEAGADPNALNR-FGRRPIQVMMM-G-----SAQVAELLLLH-GAEPNCADPATLTRP 81 (136)
T ss_dssp CCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCTTTTTSTT-S-----CHHHHHHHHHH-TCCSSCCBTTTTBCH
T ss_pred CCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCC-CCCCHHHHHHc-C-----CHHHHHHHHHC-CCCCCCcCCCCCCCH
Confidence 4577899999999999999999988654444444 89999999998 7 69999999998 6667778888 9999
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 83 LQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 83 L~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
||+|+..|+.+++++|+++|++++..+..+.++.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 115 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPV 115 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 9999999999999999999999988777665543
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.86 E-value=4.3e-21 Score=122.36 Aligned_cols=110 Identities=15% Similarity=0.052 Sum_probs=89.2
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....+|||.|+..|+.++++.|++.+..........|.||||+|+..+ +.+++++|++. +...+.++..|.|||
T Consensus 156 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~-----~~~~v~~Ll~~-gad~~~~d~~g~tpL 229 (282)
T 1oy3_D 156 YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ-----AASVLELLLKA-GADPTARMYGGRTPL 229 (282)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC-----CHHHHHHHHHc-CCCCcccccCCCCHH
Confidence 356789999999999999999999866555544435999999999988 69999999998 777888899999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 119 (121)
|+|+..|+.+++++|+++|++++..+..+.++....
T Consensus 230 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 230 GSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSS 265 (282)
T ss_dssp HHHHTSSCHHHHHHHHHTTCCCCCCC----------
T ss_pred HHHHHcCCcHHHHHHHHcCCCcCcCCCccccccccc
Confidence 999999999999999999999999988887776543
No 11
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=4.4e-22 Score=112.24 Aligned_cols=106 Identities=22% Similarity=0.240 Sum_probs=90.4
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcH
Q 044439 3 PVSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTP 82 (121)
Q Consensus 3 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tp 82 (121)
+....++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~-----~~~~~~~Ll~~-g~~~~~~d~~g~tp 78 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSK-DGNTPLHLAAKNG-----HAEIVKLLLAK-GADVNARSKDGNTP 78 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCS-SSCCTTHHHHTTT-----CHHHHHHHTTT-TCCTTCCCTTCCCT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC-----cHHHHHHHHHc-CCCCcccCCCCCCH
Confidence 45678999999999999999999988654444444 8999999999988 69999999998 66777889999999
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 83 LQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 83 L~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|++|+..|+.+++++|+++|++++..+..+..+
T Consensus 79 l~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp THHHHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 999999999999999999999998776655443
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=6.6e-21 Score=112.29 Aligned_cols=105 Identities=18% Similarity=0.136 Sum_probs=87.5
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....++||.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 32 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L 104 (153)
T 1awc_B 32 WLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK-VDRTPLHMAASEG-----HANIVEVLLKH-GADVNAKDMLKMTAL 104 (153)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHHT-----CHHHHHHHHTT-TCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC-----hHHHHHHHHHc-CCCCCCCCCCCCCHH
Confidence 3467899999999999999999987554444444 7899999999888 58999999987 666777889999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+|+..|+.+++++|+++|++++..+..+.++
T Consensus 105 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 136 (153)
T 1awc_B 105 HWATEHNHQEVVELLIKYGADVHTQSKFCKTA 136 (153)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 99999999999999999999988877666554
No 13
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=1.1e-21 Score=121.96 Aligned_cols=108 Identities=24% Similarity=0.216 Sum_probs=93.5
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|+...+...+..+..|.||||
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~~g~~~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDK-AGSTALYWACHGG-----HKDIVEMLFTQPNIELNQQNKLGDTALH 145 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHTTSTTCCCCCCCTTSCCHHH
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCC-CCCCHHHHHHHcC-----CHHHHHHHHcCCCCCccccCCCCCCHHH
Confidence 356899999999999999999987654444444 8999999999998 6999999998756777888999999999
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKL 118 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~ 118 (121)
+|+..|+.+++++|+++|++++..+..+..+..+
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 179 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDM 179 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHH
Confidence 9999999999999999999999988877765443
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.85 E-value=5.7e-21 Score=122.18 Aligned_cols=109 Identities=19% Similarity=0.148 Sum_probs=87.1
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhh---------------------------------hHhhhhcCCCCCHHHHHHhc
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDE---------------------------------IESLLTAQTKNTILHINITS 50 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~---------------------------------~~~~~~~~~g~t~lh~a~~~ 50 (121)
..+.||||+|+..|+.++++.|++.+. ..... +..|.||||+|+..
T Consensus 84 ~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~-d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 84 QDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKK-DLSGNTPLIYACSG 162 (269)
T ss_dssp TTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCC-CTTCCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHC
Confidence 345677777777777777777765321 11111 24689999999998
Q ss_pred CCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCCC
Q 044439 51 RKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 51 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 119 (121)
+ +.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++..+..+.+++.++
T Consensus 163 g-----~~~~v~~Ll~~-gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 163 G-----HHELVALLLQH-GASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp T-----CGGGHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGS
T ss_pred C-----CHHHHHHHHHC-CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 8 58999999998 667788899999999999999999999999999999999998888877665
No 15
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=1.6e-20 Score=112.45 Aligned_cols=105 Identities=18% Similarity=0.149 Sum_probs=83.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....+|||.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L 106 (172)
T 3v30_A 34 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAK-ERESALSLASTGG-----YTDIVGLLLER-DVDINIYDWNGGTPL 106 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTT-----CHHHHHHHHTT-TCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcc-cCCCHHHHHHHCC-----CHHHHHHHHHc-CCCCCCCCCCCCCHH
Confidence 3456889999999999999888887554444444 7888999988887 58888888887 666777788889999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+|+..|+.+++++|+++|++++..+..+.++
T Consensus 107 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 138 (172)
T 3v30_A 107 LYAVRGNHVKCVEALLARGADLTTEADSGYTP 138 (172)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 99999999999999999998888777665544
No 16
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.84 E-value=2.4e-20 Score=111.21 Aligned_cols=104 Identities=17% Similarity=0.176 Sum_probs=80.1
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...+|||.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.||||
T Consensus 35 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 107 (167)
T 3v31_A 35 EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK-GRESALSLACSKG-----YTDIVKMLLDC-GVDVNEYDWNGGTPLL 107 (167)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT-----CHHHHHHHHHH-TCCTTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcC-----CHHHHHHHHHC-CCCCCcCCCCCCCHHH
Confidence 456788888888888888888877544444344 7788888888877 58888888887 5666777888888888
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
+|+..|+.+++++|+++|++++..+..+.++
T Consensus 108 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 138 (167)
T 3v31_A 108 YAVHGNHVKCVKMLLESGADPTIETDSGYNS 138 (167)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 8888888888888888888887776655543
No 17
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=2.1e-20 Score=113.23 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=88.4
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhccc-CCCCcHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVN-AKGDTPLQ 84 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~-~~~~tpL~ 84 (121)
..+|||.|+..|+.++++.|++ +......+. .|.||||+|+..+ +.+++++|++. +...+..+ ..|.||||
T Consensus 44 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 44 YETPWWTAARKADEQALSQLLE-DRDVDAVDE-NGRTALLFVAGLG-----SDKCVRLLAEA-GADLDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCT-TSCCHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCSSSSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCcCCCCCCCCHHH
Confidence 4689999999999999999998 444444444 8999999999998 69999999998 55666666 88999999
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
+|+..|+.+++++|+++|++++..+..+.++.
T Consensus 116 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 147 (183)
T 3deo_A 116 MAAGYVRPEVVEALVELGADIEVEDERGLTAL 147 (183)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHH
Confidence 99999999999999999999998887776543
No 18
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.84 E-value=3.8e-20 Score=110.70 Aligned_cols=104 Identities=23% Similarity=0.246 Sum_probs=76.4
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||
T Consensus 46 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~~~~Ll~~-g~~~~~~~~~g~t~L~ 118 (169)
T 2y1l_E 46 SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH-AGMTPLRLAALFG-----HLEIVEVLLKN-GADVNANDMEGHTPLH 118 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCCCCCCCCHHH
Confidence 456778888888888888888776444333333 6788888888777 57888888877 5556667778888888
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
+|+..|+.+++++|+++|++++..+..+...
T Consensus 119 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 149 (169)
T 2y1l_E 119 LAAMFGHLEIVEVLLKNGADVNAQDKFGKTA 149 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 8888888888888888888777666555443
No 19
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.84 E-value=2e-20 Score=111.35 Aligned_cols=109 Identities=20% Similarity=0.237 Sum_probs=90.3
Q ss_pred CCCCCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCC
Q 044439 1 MNPVSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGD 80 (121)
Q Consensus 1 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (121)
|.+...+++||.|+..|+.+.++.|++.........+..|.||||+|+..+ +.+++++|++. +...+..+..|.
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~ 76 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYN-----RVSVVEYLLQH-GADVHAKDKGGL 76 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSC
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcC-----hHHHHHHHHhc-CCCCCccCCCCC
Confidence 345567789999999999999999998644333333347889999999998 69999999998 667788899999
Q ss_pred cHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 81 TPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 81 tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
||||+|+..|+.+++++|+++|++++..+..+..+
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 111 (165)
T 3twr_A 77 VPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTP 111 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCH
Confidence 99999999999999999999999998877665544
No 20
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.84 E-value=4.6e-20 Score=104.90 Aligned_cols=103 Identities=20% Similarity=0.247 Sum_probs=85.9
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
+.|+||.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~~-----~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNG-----HLEVVKLLLEA-GADVNAKDKNGRTPLHL 74 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcC-----cHHHHHHHHHc-CCCCcccCCCCCcHHHH
Confidence 56889999999999999999987544444444 7899999999888 59999999988 66677788899999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+..|+.+++++|++.|++++..+..+.++
T Consensus 75 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 104 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGADVNAKDKNGRTP 104 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHcChHHHHHHHHHcCCCCcccCCCCCCH
Confidence 999999999999999999888777665544
No 21
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.84 E-value=2.9e-20 Score=116.44 Aligned_cols=107 Identities=17% Similarity=0.161 Sum_probs=91.5
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +.+.+..+..|.||||+
T Consensus 21 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~tpLh~A~~~g-----~~~~v~~Ll~~-ga~~n~~d~~g~tpLh~ 93 (229)
T 2vge_A 21 PLVLLLDAALTGELEVVQQAVKEMNDPSQPNE-EGITALHNAICGA-----NYSIVDFLITA-GANVNSPDSHGWTPLHC 93 (229)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred hhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHcC-----CHHHHHHHHHC-CCCCCCCCCCCCCHHHH
Confidence 44789999999999999999987655444444 8999999999998 69999999998 67778889999999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCC-CCCCcCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGN-EEPERGLKLP 119 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~-~~~~~~~~~~ 119 (121)
|+..|+.+++++|++.|++++... ..+..+..++
T Consensus 94 A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 94 AASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp HHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred HHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 999999999999999999998764 4666665543
No 22
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.83 E-value=3.7e-20 Score=115.00 Aligned_cols=110 Identities=19% Similarity=0.081 Sum_probs=90.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....+|||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++.+....+..+..|.|||
T Consensus 105 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~g~~~~~~~d~~g~t~L 178 (228)
T 2dzn_A 105 NQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK-FNQIPLHRAASVG-----SLKLIELLCGLGKSAVNWQDKQGWTPL 178 (228)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTT-----CHHHHHHHHTTTCCCSCCCCTTSCCHH
T ss_pred cCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCC-CCCCHHHHHHHcC-----CHHHHHHHHhcCcccccCcCCCCCCHH
Confidence 3466889999999999999888887554444444 7899999999888 589999999885477788899999999
Q ss_pred HHHHHhCCHHHHHHHH-HhCCCCCCCCCCCCcCCCCC
Q 044439 84 QVAAKFGHSDIVSVLI-KEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll-~~ga~~~~~~~~~~~~~~~~ 119 (121)
|+|+..|+.+++++|+ ++|++++..+..+.++..++
T Consensus 179 ~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A 215 (228)
T 2dzn_A 179 FHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVA 215 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGC
T ss_pred HHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHH
Confidence 9999999999999999 88999998888888776654
No 23
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.83 E-value=5.2e-20 Score=112.01 Aligned_cols=101 Identities=21% Similarity=0.147 Sum_probs=56.6
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..+|||+|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 68 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 140 (192)
T 2rfm_A 68 GSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF-SGKTPLMWSIIFG-----YSEMSYFLLEH-GANVNDRNLEGETPLIV 140 (192)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHHT-----CHHHHHHHHHT-TCCSSCCCTTCCCHHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcC-----CHHHHHHHHHC-CCCCCCCCCCCCCHHHH
Confidence 44556666666666666665555333222222 4566666666555 35666666655 44445555666666666
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPE 113 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~ 113 (121)
|+..|+.+++++|+++|++++..+..+.
T Consensus 141 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 168 (192)
T 2rfm_A 141 ASKYGRSEIVKKLLELGADISARDLTGL 168 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 6666666666666666666555544443
No 24
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.83 E-value=1e-19 Score=113.79 Aligned_cols=110 Identities=14% Similarity=0.110 Sum_probs=94.2
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....++||.|+..|+.++++.|++.+..........|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 114 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L 187 (241)
T 1k1a_A 114 YDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN-----SLSMVQLLLQH-GANVNAQMYSGSSAL 187 (241)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCBCTTSCBHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcC-----CHHHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 346688999999999999999998865544444247999999999988 69999999998 677788899999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 119 (121)
|+|+..|+.+++++|+++|++++..+..+.++..++
T Consensus 188 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A 223 (241)
T 1k1a_A 188 HSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA 223 (241)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTC
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHH
Confidence 999999999999999999999999888888877765
No 25
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.83 E-value=4.1e-20 Score=116.15 Aligned_cols=101 Identities=16% Similarity=0.162 Sum_probs=88.3
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..|..|.||||+
T Consensus 37 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g-----~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~ 109 (239)
T 1ycs_B 37 PLALLLDSSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVCAG-----HTEIVKFLVQF-GVNVNAADSDGWTPLHC 109 (239)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT-TSCCHHHHHHHHT-----CHHHHHHHHHH-TCCTTCCCTTCCCHHHH
T ss_pred hhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCccCCCCCCHHHH
Confidence 35889999999999999999988664444444 8999999999998 69999999998 67788889999999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPE 113 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~ 113 (121)
|+..|+.+++++|+++|++++..+..+.
T Consensus 110 A~~~~~~~~v~~Ll~~ga~~~~~~~~~~ 137 (239)
T 1ycs_B 110 AASCNNVQVCKFLVESGAAVFAMTYSDM 137 (239)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCSSSC
T ss_pred HHHcCCHHHHHHHHHcCCCcceecCCCC
Confidence 9999999999999999999987765443
No 26
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=4.3e-20 Score=116.51 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=88.2
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhccc-CCCCcHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVN-AKGDTPLQ 84 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~-~~~~tpL~ 84 (121)
..||||.|+..|+.++++.|++ +......+. .|.||||+|+..+ +.+++++|++. +...+..+ ..|.||||
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-~g~t~L~~A~~~g-----~~~~v~~Ll~~-ga~~~~~~~~~g~t~L~ 116 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DRDVDAVDE-NGRTALLFVAGLG-----SDKCVRLLAEA-GADLDHRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCT-TSCBHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCSSSCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCC-CCCCHHHHHHHCC-----CHHHHHHHHHc-CCCCCcCCCCCCCCHHH
Confidence 4689999999999999999998 444444444 8999999999998 69999999998 56666666 88999999
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
+|+..|+.+++++|+++|++++..+..+.++.
T Consensus 117 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l 148 (244)
T 3ui2_A 117 MAAGYVRPEVVEALVELGADIEVEDERGLTAL 148 (244)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 99999999999999999999998877766543
No 27
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.83 E-value=8e-20 Score=111.19 Aligned_cols=105 Identities=19% Similarity=0.159 Sum_probs=91.1
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....||||.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 33 SYNRTPLMVACMLGMENAIDKLVENFDKLEDKDI-EGSTALIWAVKNN-----RLGIAEKLLSK-GSNVNTKDFSGKTPL 105 (192)
T ss_dssp TTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHH-TCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhccccccccc-cCccHHHHHHHcC-----CHHHHHHHHHC-CCCCCCCCCCCCcHH
Confidence 4577999999999999999999998554444444 7999999999998 69999999999 666778899999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+|+..|+.+++++|+++|++++..+..+.++
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 137 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLEHGANVNDRNLEGETP 137 (192)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 99999999999999999999998877666554
No 28
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.82 E-value=9e-20 Score=108.67 Aligned_cols=103 Identities=15% Similarity=0.097 Sum_probs=89.3
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 75 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDE-EGFTPLMWAAAHG-----QIAVVEFLLQN-GADPQLLGKGRESALSL 75 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCC-CCCCHHHHHHHCC-----CHHHHHHHHHc-CCCCCCcCCCCCcHHHH
Confidence 46889999999999999999988554444444 8999999999998 69999999998 66777889999999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+..|+.+++++|+++|++++..+..+..+
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 105 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGVDVNEYDWNGGTP 105 (167)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTSCCH
T ss_pred HHHcCCHHHHHHHHHCCCCCCcCCCCCCCH
Confidence 999999999999999999998877666544
No 29
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.82 E-value=1.8e-20 Score=110.81 Aligned_cols=100 Identities=17% Similarity=0.087 Sum_probs=54.8
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCc-HH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDT-PL 83 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~t-pL 83 (121)
...++||.|+..|+.++++.|++.+........ .|.||||+|+ .+ +.+++++|++. +...+..+..|.| ||
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~-~~-----~~~~v~~Ll~~-g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNS-YGRRPIQVMM-MG-----SARVAELLLLH-GAEPNCADPATLTRPV 82 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCS-SSCCTTTSSC-TT-----CHHHHHHHHTT-TCCCCCCCTTTCCCHH
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH-cC-----CHHHHHHHHHc-CCCCCCcCCCCCcHHH
Confidence 456788888888888888888876433222222 4555555542 33 35555555554 3344444555555 55
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEP 112 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~ 112 (121)
|+|+..|+.+++++|+++|++++..+..+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 111 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARLDVRDAWG 111 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSSCCCTTC
T ss_pred HHHHHCCCHHHHHHHHHcCCCCcccCCCC
Confidence 55555555555555555555554444333
No 30
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.82 E-value=1e-19 Score=107.86 Aligned_cols=102 Identities=24% Similarity=0.271 Sum_probs=70.2
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...++||.|+. |+.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.||||
T Consensus 37 ~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 108 (162)
T 1ihb_A 37 FGRTALQVMKL-GNPEIARRLLLRGANPDLKDR-TGFAVIHDAARAG-----FLDTLQTLLEF-QADVNIEDNEGNLPLH 108 (162)
T ss_dssp TSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred cCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCcCCCCCCHHH
Confidence 45577777777 777777777776443333333 6777777777776 47777777776 5556666777777777
Q ss_pred HHHHhCCHHHHHHHHHhCCC-CCCCCCCCCc
Q 044439 85 VAAKFGHSDIVSVLIKEAKS-AQHGNEEPER 114 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~-~~~~~~~~~~ 114 (121)
+|+..|+.+++++|+++|++ ++..+..+.+
T Consensus 109 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t 139 (162)
T 1ihb_A 109 LAAKEGHLRVVEFLVKHTASNVGHRNHKGDT 139 (162)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred HHHHcCCHHHHHHHHHccCCCCCCcCCCCCc
Confidence 77777777777777777776 3555554443
No 31
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.82 E-value=6e-21 Score=112.90 Aligned_cols=106 Identities=14% Similarity=0.066 Sum_probs=79.6
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCC-HHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNT-ILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTP 82 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t-~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tp 82 (121)
....+|||.|+ .|+.++++.|++.+........ .|.| |||+|+..+ +.+++++|++. +...+..+..|.||
T Consensus 43 ~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~-~g~ttpL~~A~~~~-----~~~~v~~Ll~~-ga~~~~~d~~g~tp 114 (156)
T 1bi7_B 43 SYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP-ATLTRPVHDAAREG-----FLDTLVVLHRA-GARLDVRDAWGRLP 114 (156)
T ss_dssp SSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT-TTCCCHHHHHHHHT-----CHHHHHHHHHH-TCCSSCCCTTCCCH
T ss_pred CCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHHCC-----CHHHHHHHHHc-CCCCcccCCCCCCH
Confidence 45678999985 9999999999998655444444 7888 999999998 69999999999 67778889999999
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCC
Q 044439 83 LQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLK 117 (121)
Q Consensus 83 L~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~ 117 (121)
||+|+..|+.+++++|+++|++++..+..+.....
T Consensus 115 l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 115 VDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 99999999999999999999999888776655543
No 32
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.81 E-value=2.2e-19 Score=107.42 Aligned_cols=103 Identities=16% Similarity=0.119 Sum_probs=88.2
Q ss_pred CHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHH
Q 044439 7 HPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVA 86 (121)
Q Consensus 7 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a 86 (121)
.++||.|+..|+.+.++.+++.+.......+..|.||||+|+..+ +.+++++|++. +...+..+..|.||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A 76 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFG-----EIETVRFLLEW-GADPHILAKERESALSLA 76 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTT-----CHHHHHHHHHH-TCCTTCCCTTCCCHHHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcC-----CHHHHHHHHHc-CCCchhhcccCCCHHHHH
Confidence 367999999999999999999855433333448999999999998 69999999998 667778899999999999
Q ss_pred HHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 87 AKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 87 ~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
+..|+.+++++|+++|++++..+..+..+
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 105 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVDINIYDWNGGTP 105 (172)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCCTTSCCH
T ss_pred HHCCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 99999999999999999998877666544
No 33
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.81 E-value=3.6e-19 Score=111.32 Aligned_cols=110 Identities=16% Similarity=0.135 Sum_probs=87.5
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhH-----hhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccC-
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIE-----SLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNA- 77 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~-----~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~- 77 (121)
....+|||+|+..|+.++++.|++.+... ....+..|.||||+|+..+ +.+++++|++. +...+..+.
T Consensus 76 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~ 149 (236)
T 1ikn_D 76 FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG-----YLGIVELLVSL-GADVNAQEPC 149 (236)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTT-----CHHHHHHHHHH-TCCTTCCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCCCCC
Confidence 34568899999999999998888764321 1122246899999999888 59999999998 556666676
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCCC
Q 044439 78 KGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 78 ~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 119 (121)
.|.||||+|+..|+.+++++|+++|++++..+..+.++..++
T Consensus 150 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A 191 (236)
T 1ikn_D 150 NGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT 191 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHH
Confidence 899999999999999999999999999998888777766544
No 34
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.81 E-value=2.6e-19 Score=107.02 Aligned_cols=103 Identities=26% Similarity=0.323 Sum_probs=89.1
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..++|++|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 86 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDA-SGWTPLHLAAFNG-----HLEIVEVLLKN-GADVNAVDHAGMTPLRL 86 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCccCCCCCCHHHH
Confidence 45789999999999999999998654444444 8999999999998 69999999998 66777889999999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+..|+.+++++|+++|++++..+..+...
T Consensus 87 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 116 (169)
T 2y1l_E 87 AALFGHLEIVEVLLKNGADVNANDMEGHTP 116 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 999999999999999999998877665543
No 35
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.81 E-value=8.4e-20 Score=116.77 Aligned_cols=104 Identities=18% Similarity=0.216 Sum_probs=50.4
Q ss_pred CCCHHHHHHHHcCChH-HHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhC---------------
Q 044439 5 SIHPNLFKAAAAGNAE-PFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEIC--------------- 68 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~-~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~--------------- 68 (121)
...+||+.|+..+..+ .++.|++.+......+. .|+||||+|+..+ +.+++++|+..+
T Consensus 51 ~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~-~G~TpLh~A~~~g-----~~~~v~~Ll~~~a~~~~~~~~g~t~l~ 124 (269)
T 4b93_B 51 EFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQ-DGSSPLHVAALHG-----RADLIPLLLKHGANAGARNADQAVPLH 124 (269)
T ss_dssp ------------------------CCCCTTCCCT-TSCCHHHHHHHTT-----CTTHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC-----cHHHHHHHHhcCCCcCccCCCCCCccc
Confidence 4568899999887764 67777777555444444 8999999999888 356666665542
Q ss_pred -----------------ChhhhcccCCCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCc
Q 044439 69 -----------------PSLLLKVNAKGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPER 114 (121)
Q Consensus 69 -----------------~~~~~~~~~~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~ 114 (121)
+..++..+..|.||||+|+..|+.+++++|+++|++++..+..+..
T Consensus 125 ~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t 187 (269)
T 4b93_B 125 LACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNT 187 (269)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCB
T ss_pred cccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCc
Confidence 2333445556666666666666666666666666666655544443
No 36
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.81 E-value=1.8e-19 Score=113.95 Aligned_cols=104 Identities=15% Similarity=0.078 Sum_probs=75.6
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||
T Consensus 123 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-ga~~~~~~~~g~tpL~ 195 (253)
T 1yyh_A 123 DGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWAAAVN-----NVDAAVVLLKN-GANKDMQNNREETPLF 195 (253)
T ss_dssp TCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCT-TSCBHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCcCCCCCCHHH
Confidence 355677777777777777777766444333333 6788888888777 57888888877 5566677888888888
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
+|+..|+.+++++|+++|++++..+..+.++
T Consensus 196 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tp 226 (253)
T 1yyh_A 196 LAAREGSYETAKVLLDHFANRDITDHMDRLP 226 (253)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred HHHHCCCHHHHHHHHHcCCCccccccCCCCH
Confidence 8888888888888888888877776665544
No 37
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.81 E-value=1.5e-19 Score=112.50 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=77.3
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...+|||.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.||||
T Consensus 105 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 177 (231)
T 3aji_A 105 NGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH-YDATAMHRAAAKG-----NLKMVHILLFY-KASTNIQDTEGNTPLH 177 (231)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT-----CHHHHHHHHHT-TCCSCCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcC-----CHHHHHHHHhc-CCCccccCCCCCCHHH
Confidence 345677777777777777777766443333333 6778888888777 58888888877 5566677888888888
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLK 117 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~ 117 (121)
+|+..|+.+++++|+++|++++..+..+.++..
T Consensus 178 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 210 (231)
T 3aji_A 178 LACDEERVEEAKFLVTQGASIYIENKEEKTPLQ 210 (231)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHH
T ss_pred HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 888888888888888888888777766665543
No 38
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.81 E-value=3.5e-19 Score=113.08 Aligned_cols=106 Identities=18% Similarity=0.213 Sum_probs=85.0
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..+|||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+. +..|.||||+
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~-~~~g~t~Lh~ 172 (261)
T 2xai_A 101 LASPIHEAARRGHVECVNSLIAYGGNIDHKIS-HLGTPLYLACENQ-----QRACVKKLLES-GADVNQ-GKGQDSPLHA 172 (261)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBT-TTBCHHHHHHHTT-----CHHHHHHHHHH-TCCTTC-CBTTBCHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHhC-----CHHHHHHHHHc-CCCCCC-CCCCCChHHH
Confidence 56788888888888888888877554444444 7889999999887 58999999988 455554 7888999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 119 (121)
|+..|+.+++++|+++|++++..+..+.++..++
T Consensus 173 A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A 206 (261)
T 2xai_A 173 VARTASEELACLLMDFGADTQAKNAEGKRPVELV 206 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGS
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhc
Confidence 9999999999999999999998888887776554
No 39
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.81 E-value=2.4e-19 Score=108.01 Aligned_cols=104 Identities=22% Similarity=0.249 Sum_probs=87.9
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..++||.|+..|+.+.++.|++.........+..|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREG-----RSAVVEMLIMR-GARINVMNRGDDTPLHL 78 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcC-----cHHHHHHHHHc-CCCCCCcCCCCCCHHHH
Confidence 4567999999999999999998744333333448999999999998 69999999998 67778889999999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+..|+.+++++|+++|++++..+..+..+
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~ 108 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKADINAVNEHGNVP 108 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCH
Confidence 999999999999999999998877666554
No 40
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.81 E-value=1.4e-19 Score=107.26 Aligned_cols=104 Identities=15% Similarity=0.089 Sum_probs=88.5
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....++||.|+..|+.++++.|++.+........ .|.||||+|+. + +.+++++|++. +...+..+..|.|||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~-~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L 74 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNG-FGRTALQVMKL-G-----NPEIARRLLLR-GANPDLKDRTGFAVI 74 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCT-TSCCHHHHCCS-S-----CHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCc-cCccHHHHHHc-C-----cHHHHHHHHHc-CCCCCCCCCCCCCHH
Confidence 3467899999999999999999987554444444 89999999988 6 69999999998 667778899999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+|+..|+.+++++|+++|++++..+..+..+
T Consensus 75 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 106 (162)
T 1ihb_A 75 HDAARAGFLDTLQTLLEFQADVNIEDNEGNLP 106 (162)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 99999999999999999999998877766554
No 41
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.81 E-value=2.7e-19 Score=103.56 Aligned_cols=92 Identities=18% Similarity=0.151 Sum_probs=80.3
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 45 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~tpl 117 (136)
T 2jab_A 45 EYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDA-IGFTPLHLAAFIG-----HLEIAEVLLKH-GADVNAQDKFGKTAF 117 (136)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCcCcCCCCCCHH
Confidence 4467899999999999999999988655444444 8999999999998 69999999998 666778899999999
Q ss_pred HHHHHhCCHHHHHHHHHhC
Q 044439 84 QVAAKFGHSDIVSVLIKEA 102 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~g 102 (121)
++|+..|+.+++++|+++|
T Consensus 118 ~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 118 DISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999876
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.81 E-value=6.8e-19 Score=109.68 Aligned_cols=106 Identities=19% Similarity=0.181 Sum_probs=76.0
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhh----hhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccC--
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESL----LTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNA-- 77 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~----~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~-- 77 (121)
....||||.|+..|+.++++.|++.+..... ..+..|.||||+|+..+ +.+++++|++. +...+..+.
T Consensus 35 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~~ 108 (232)
T 2rfa_A 35 AMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQ-----NVNLVRALLAR-GASVSARATGS 108 (232)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCCSG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcC-----CHHHHHHHHhC-CCCCCcccCCc
Confidence 3456788888888888888888876443211 11236788888888877 58888888887 444444433
Q ss_pred -----------CCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 78 -----------KGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 78 -----------~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
.|.||||+|+..|+.+++++|+++|++++..+..+.++
T Consensus 109 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~ 157 (232)
T 2rfa_A 109 VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTV 157 (232)
T ss_dssp GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 68888888888888888888888888887776665544
No 43
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.81 E-value=2.3e-19 Score=105.62 Aligned_cols=102 Identities=22% Similarity=0.203 Sum_probs=87.9
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
+.++|+.|+..|+.++++.|++.+.... .+..|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 73 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYG-----HFSTTEVLLRA-GVSRDARTKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHT-----CHHHHHHHHTT-TCCTTCCCTTCCCHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCCCCCCCCHHHH
Confidence 4578999999999999999998854322 3447999999999998 69999999988 66677889999999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+..|+.+++++|+++|++++..+..+..+
T Consensus 74 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 103 (153)
T 1awc_B 74 AASEGHANIVEVLLKHGADVNAKDMLKMTA 103 (153)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCTTSCCH
T ss_pred HHHcChHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 999999999999999999998877666544
No 44
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.80 E-value=7e-19 Score=109.47 Aligned_cols=107 Identities=22% Similarity=0.268 Sum_probs=71.0
Q ss_pred CCCCCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCC
Q 044439 1 MNPVSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGD 80 (121)
Q Consensus 1 ~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (121)
|+....+++||.|+..|+.+.++.++..........+..|.||||+|+..+ +.+++++|++. +...+..+..|.
T Consensus 1 me~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g-----~~~~v~~Ll~~-g~~~~~~~~~g~ 74 (231)
T 3aji_A 1 MEGCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAG-----HTEIVEFLLQL-GVPVNDKDDAGW 74 (231)
T ss_dssp --CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHT-----CHHHHHHHHHT-TCCSCCCCTTSC
T ss_pred CCCccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcC-----cHHHHHHHHHh-CCCCCCcCCCCC
Confidence 455556677777777777777777776633322223346777777777776 47777777776 455556677777
Q ss_pred cHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCC
Q 044439 81 TPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPE 113 (121)
Q Consensus 81 tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~ 113 (121)
||||+|+..|+.+++++|++.|++++..+..+.
T Consensus 75 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 107 (231)
T 3aji_A 75 SPLHIAASAGXDEIVKALLVKGAHVNAVNQNGC 107 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCC
Confidence 777777777777777777777777666554443
No 45
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.80 E-value=4.9e-19 Score=100.59 Aligned_cols=94 Identities=22% Similarity=0.258 Sum_probs=82.3
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....++||.|+..++.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 33 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~-----~~~~~~~Ll~~-g~~~~~~~~~g~t~l 105 (126)
T 1n0r_A 33 KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNG-----HLEVVKLLLEA-GADVNAKDKNGRTPL 105 (126)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred CCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcC-----hHHHHHHHHHc-CCCCcccCCCCCCHH
Confidence 3467899999999999999999987554444444 7999999999988 69999999998 667778899999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKS 104 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~ 104 (121)
++|+..|+.+++++|+++|++
T Consensus 106 ~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 106 HLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999984
No 46
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.80 E-value=3.7e-20 Score=107.23 Aligned_cols=93 Identities=14% Similarity=0.049 Sum_probs=81.8
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCC-CCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQT-KNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTP 82 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~-g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tp 82 (121)
....||||.|+. |+.++++.|++.+......+. . |.||||+|+..+ +.+++++|++. +...+..+..|.||
T Consensus 43 ~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~-~~g~t~L~~A~~~~-----~~~~v~~Ll~~-ga~~~~~d~~g~tp 114 (136)
T 1d9s_A 43 RFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADP-ATLTRPVHDAAREG-----FLDTLVVLHRA-GARLDVCDAWGRLP 114 (136)
T ss_dssp TTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBT-TTTBCHHHHHHHHT-----CHHHHHHHHHT-CCCCCCCSSSSSCH
T ss_pred CCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCC-CCCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCccCCCCCCH
Confidence 456789999999 999999999998655444444 6 899999999998 69999999998 66778889999999
Q ss_pred HHHHHHhCCHHHHHHHHHhCCC
Q 044439 83 LQVAAKFGHSDIVSVLIKEAKS 104 (121)
Q Consensus 83 L~~a~~~g~~~~~~~Ll~~ga~ 104 (121)
|++|+..|+.+++++|+++|++
T Consensus 115 l~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 115 VDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999984
No 47
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.80 E-value=2.6e-19 Score=115.22 Aligned_cols=104 Identities=20% Similarity=0.220 Sum_probs=90.2
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g-----~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~ 112 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINYANV-DGLTALHQACIDD-----NVDMVKFLVEN-GANINQPDNEGWIPLHA 112 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCT-TCCBHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcC-----CHHHHHHHHHC-CCCCCCCCCCCCcHHHH
Confidence 35789999999999999999988655444444 7999999999998 69999999998 66778889999999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
|+..|+.+++++|+++|++++..+..+.++.
T Consensus 113 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l 143 (299)
T 1s70_B 113 AASCGYLDIAEYLISQGAHVGAVNSEGDTPL 143 (299)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 9999999999999999999988776665543
No 48
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.80 E-value=8e-19 Score=108.68 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=58.5
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 164 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWAAAVN-----NVDAAVVLLKN-GANKDMQNNREETPLFL 164 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred CCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC-CCCcHHHHHHHcC-----CHHHHHHHHHc-CCCCCCcCCCCcCHHHH
Confidence 34556666666666666655554333222222 5666666666655 46666666665 44555556666666666
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPE 113 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~ 113 (121)
|+..|+.+++++|+++|++++..+..+.
T Consensus 165 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 192 (223)
T 2f8y_A 165 AAREGSYETAKVLLDHFANRDITDHMDR 192 (223)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred HHHcCCHHHHHHHHHcCCCCccccccCC
Confidence 6666666666666666666655544443
No 49
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.80 E-value=6e-19 Score=107.70 Aligned_cols=97 Identities=23% Similarity=0.189 Sum_probs=44.3
Q ss_pred CHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHH
Q 044439 7 HPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVA 86 (121)
Q Consensus 7 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a 86 (121)
.+|||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|+...+...+..+..|.||||+|
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~-----~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A 113 (201)
T 3hra_A 40 NTPLNIAVHNNDIEIAKALIDRGADINLQNS-ISDSPYLYAGAQG-----RTEILAYMLKHATPDLNKHNRYGGNALIPA 113 (201)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHHSCCCTTCCCTTSCCSHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC-----CHHHHHHHHhccCcccccccCCCCcHHHHH
Confidence 3455555555555555555554332222222 4445555555444 344444444333333444444444444444
Q ss_pred HHhCCHHHHHHHHHhC-CCCCCCC
Q 044439 87 AKFGHSDIVSVLIKEA-KSAQHGN 109 (121)
Q Consensus 87 ~~~g~~~~~~~Ll~~g-a~~~~~~ 109 (121)
+..|+.+++++|++.| ++++..+
T Consensus 114 ~~~~~~~~v~~Ll~~g~~~~~~~~ 137 (201)
T 3hra_A 114 AEKGHIDNVKLLLEDGREDIDFQN 137 (201)
T ss_dssp HHTTCHHHHHHHHHHCCCCTTCCC
T ss_pred HHcCCHHHHHHHHHcCCCCcCCCC
Confidence 4444444444444444 4444333
No 50
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.80 E-value=3.5e-19 Score=111.20 Aligned_cols=105 Identities=22% Similarity=0.222 Sum_probs=74.2
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...+|||.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.||||
T Consensus 110 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~~~~Ll~~-g~~~~~~~~~g~t~L~ 182 (237)
T 3b7b_A 110 GGWTPMIWATEYKHVDLVKLLLSKGSDINIRDN-EENICLHWAAFSG-----CVDIAEILLAA-KCDLHAVNIHGDSPLH 182 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHC-----CHHHHHHHHTT-TCCTTCCCTTCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCC-CCCCHHHHHHHCC-----CHHHHHHHHHc-CCCCCCcCCCCCCHHH
Confidence 345677777777777777777766443333333 6777888777776 47777777776 5556666777888888
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
+|+..|+.+++++|+++|++++..+..+.++.
T Consensus 183 ~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l 214 (237)
T 3b7b_A 183 IAARENRYDCVVLFLSRDSDVTLKNKEGETPL 214 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred HHHHhCCHhHHHHHHHcCCCCCccCCCCCCHH
Confidence 88888888888888888887777766665543
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.79 E-value=9.1e-20 Score=115.26 Aligned_cols=107 Identities=15% Similarity=0.108 Sum_probs=89.7
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcC------------CCCCHHHHHHhcCCCccccHHHHHHHHH---hC
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQ------------TKNTILHINITSRKRKNVSTKFIEEILE---IC 68 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~------------~g~t~lh~a~~~~~~~~~~~~~~~~ll~---~~ 68 (121)
....||||.|+..|+.++++.|++.+......... .|.||||+|+..+ +.+++++|++ .
T Consensus 88 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~-----~~~~v~~Ll~~~~~- 161 (256)
T 2etb_A 88 YQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK-----QWDVVTYLLENPHQ- 161 (256)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTT-----CHHHHHHHHHCSSC-
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcC-----CHHHHHHHHhcccc-
Confidence 34779999999999999999999986554444331 1999999999998 6999999999 6
Q ss_pred ChhhhcccCCCCcHHHHHHH--hCCHH-------HHHHHHHhCCCC-------CCCCCCCCcCC
Q 044439 69 PSLLLKVNAKGDTPLQVAAK--FGHSD-------IVSVLIKEAKSA-------QHGNEEPERGL 116 (121)
Q Consensus 69 ~~~~~~~~~~~~tpL~~a~~--~g~~~-------~~~~Ll~~ga~~-------~~~~~~~~~~~ 116 (121)
+.+.+..+..|.||||+|+. .++.+ ++++|+++|+++ +..+..+.++.
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL 225 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPL 225 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHH
Confidence 77788889999999999999 78888 999999999998 66666665543
No 52
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=7.2e-19 Score=112.96 Aligned_cols=95 Identities=16% Similarity=0.158 Sum_probs=84.6
Q ss_pred CCCCHHHHHHHHc---CChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCC
Q 044439 4 VSIHPNLFKAAAA---GNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGD 80 (121)
Q Consensus 4 ~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (121)
....||||.|+.. |+.++++.|++.+......+. .|.||||+|+..+ +.++++.|++. +.+.+..|..|.
T Consensus 167 ~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~-~g~TpLh~A~~~g-----~~~~v~~Ll~~-gad~~~~d~~g~ 239 (278)
T 1dcq_A 167 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG-KGSTALHYCCLTD-----NAECLKLLLRG-KASIEIANESGE 239 (278)
T ss_dssp STTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCT-TCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSC
T ss_pred cCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCccCCCC
Confidence 3467999999999 899999999998665555555 8999999999998 69999999998 677888999999
Q ss_pred cHHHHHHHhCCHHHHHHHHHhCCCC
Q 044439 81 TPLQVAAKFGHSDIVSVLIKEAKSA 105 (121)
Q Consensus 81 tpL~~a~~~g~~~~~~~Ll~~ga~~ 105 (121)
||||+|+..|+.+++++|+++|++.
T Consensus 240 tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 240 TPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999864
No 53
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.79 E-value=8.4e-19 Score=110.82 Aligned_cols=108 Identities=20% Similarity=0.175 Sum_probs=89.8
Q ss_pred CCCCCHHHHHHHHc---CChHHHHHHhhhhhhHhhhh----------cCCCCCHHHHHHhcCCCccccHHHHHHHHHhCC
Q 044439 3 PVSIHPNLFKAAAA---GNAEPFKKDIRRDEIESLLT----------AQTKNTILHINITSRKRKNVSTKFIEEILEICP 69 (121)
Q Consensus 3 ~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~----------~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~ 69 (121)
+....||||+|+.. |+.++++.|++.+....... +..|.||||+|+..+ +.+++++|++. +
T Consensus 40 d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g-----~~~~v~~Ll~~-g 113 (256)
T 2etb_A 40 GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKR-----SLQCVKLLVEN-G 113 (256)
T ss_dssp TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTT-----CHHHHHHHHHT-T
T ss_pred CCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcC-----CHHHHHHHHHc-C
Confidence 34577999999999 99999999998855433211 136999999999998 69999999998 5
Q ss_pred hhhhcccCC-------------CCcHHHHHHHhCCHHHHHHHHH---hCCCCCCCCCCCCcCC
Q 044439 70 SLLLKVNAK-------------GDTPLQVAAKFGHSDIVSVLIK---EAKSAQHGNEEPERGL 116 (121)
Q Consensus 70 ~~~~~~~~~-------------~~tpL~~a~~~g~~~~~~~Ll~---~ga~~~~~~~~~~~~~ 116 (121)
...+..+.. |.||||+|+..|+.+++++|++ .|++++..+..+..++
T Consensus 114 a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpL 176 (256)
T 2etb_A 114 ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVL 176 (256)
T ss_dssp CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred CCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHH
Confidence 666666665 9999999999999999999999 9999998887766543
No 54
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.79 E-value=5.8e-19 Score=104.04 Aligned_cols=98 Identities=13% Similarity=0.153 Sum_probs=47.4
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..||||. +..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 36 g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 107 (156)
T 1bd8_A 36 GKTALQV-MMFGSTAIALELLKQGASPNVQDT-SGTSPVHDAARTG-----FLDTLKVLVEH-GADVNVPDGTGALPIHL 107 (156)
T ss_dssp SCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHT-TCCSCCCCTTSCCHHHH
T ss_pred CCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC-----cHHHHHHHHHc-CCCCCCcCCCCCcHHHH
Confidence 3445555 555555555555544332222222 4555555555554 35555555554 33444445555555555
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEP 112 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~ 112 (121)
|+..|+.+++++|++. ++++..+..+
T Consensus 108 A~~~~~~~~v~~Ll~~-~~~~~~~~~g 133 (156)
T 1bd8_A 108 AVQEGHTAVVSFLAAE-SDLHRRDARG 133 (156)
T ss_dssp HHHHTCHHHHHHHHTT-SCTTCCCTTS
T ss_pred HHHhChHHHHHHHHhc-cCCCCcCCCC
Confidence 5555555555555555 4444444333
No 55
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.79 E-value=7.8e-20 Score=115.72 Aligned_cols=105 Identities=10% Similarity=0.056 Sum_probs=88.7
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhc-------------CCCCCHHHHHHhcCCCccccHHHHHHHHH---hC
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTA-------------QTKNTILHINITSRKRKNVSTKFIEEILE---IC 68 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-------------~~g~t~lh~a~~~~~~~~~~~~~~~~ll~---~~ 68 (121)
...||||+|+..|+.++++.|++.+........ ..|.||||+|+..+ +.+++++|++ .
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g-----~~~~v~~Ll~~~~~- 165 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTN-----QPHIVHYLTENGHK- 165 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTT-----CHHHHHHHHHCSSC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcC-----CHHHHHHHHhcccc-
Confidence 567999999999999999999998655544441 36999999999998 6999999999 6
Q ss_pred ChhhhcccCCCCcHHHHHHHhCC---------HHHHHHHHHhCCCC-------CCCCCCCCcC
Q 044439 69 PSLLLKVNAKGDTPLQVAAKFGH---------SDIVSVLIKEAKSA-------QHGNEEPERG 115 (121)
Q Consensus 69 ~~~~~~~~~~~~tpL~~a~~~g~---------~~~~~~Ll~~ga~~-------~~~~~~~~~~ 115 (121)
+...+.++..|.||||+|+..++ .+++++|+++|+++ +..+..+.++
T Consensus 166 ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tp 228 (260)
T 3jxi_A 166 QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSP 228 (260)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCH
T ss_pred CCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCH
Confidence 77788889999999999999888 79999999999988 4455555544
No 56
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=9.1e-19 Score=112.59 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=85.3
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+. +..|.||||+
T Consensus 157 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-ga~~~~-~~~g~t~L~~ 228 (285)
T 3d9h_A 157 LASPIHEAARRGHVECVNSLIAYGGNIDHKIS-HLGTPLYLACENQ-----QRACVKKLLES-GADVNQ-GKGQDSPLHA 228 (285)
T ss_dssp TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBT-TTBCHHHHHHHTT-----CHHHHHHHHHT-TCCTTC-CBTTBCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC-----cHHHHHHHHHC-CCCCCC-CCCCCCHHHH
Confidence 56788888888888888888877554444444 7889999999888 58999999988 555554 7889999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 119 (121)
|+..|+.+++++|+++|++++..+..+.++..++
T Consensus 229 A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 262 (285)
T 3d9h_A 229 VVRTASEELACLLMDFGADTQAKNAEGKRPVELV 262 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGS
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHh
Confidence 9999999999999999999998888887776554
No 57
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.79 E-value=1.5e-18 Score=111.60 Aligned_cols=75 Identities=17% Similarity=0.274 Sum_probs=66.6
Q ss_pred CCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCC
Q 044439 39 TKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKL 118 (121)
Q Consensus 39 ~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~ 118 (121)
.|.||||+|+..+ +.+++++|++. +...+..+..|.||||+|+..|+.+++++|+++|++++..+..+.++..+
T Consensus 198 ~g~t~L~~A~~~g-----~~~~v~~Ll~~-g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~ 271 (299)
T 1s70_B 198 SGGTALHVAAAKG-----YTEVLKLLIQA-RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV 271 (299)
T ss_dssp TCCCHHHHHHHHT-----CHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTS
T ss_pred CCCCHHHHHHHCC-----cHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 5789999999888 58999999987 66778889999999999999999999999999999999998888888776
Q ss_pred C
Q 044439 119 P 119 (121)
Q Consensus 119 ~ 119 (121)
+
T Consensus 272 A 272 (299)
T 1s70_B 272 A 272 (299)
T ss_dssp C
T ss_pred H
Confidence 5
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.79 E-value=1.2e-18 Score=106.41 Aligned_cols=107 Identities=15% Similarity=0.075 Sum_probs=90.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....+|||.|+..|+.++++.|++.........+..|.||||+|+..+ +.+++++|++.+....+..+..|.|||
T Consensus 70 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-----~~~~v~~Ll~~g~~~~~~~~~~g~t~L 144 (201)
T 3hra_A 70 SISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKG-----HIDNVKLLLEDGREDIDFQNDFGYTAL 144 (201)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTT-----CHHHHHHHHHHCCCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcC-----CHHHHHHHHHcCCCCcCCCCCCCCCHH
Confidence 346789999999999999999996643222333347999999999998 699999999996578888899999999
Q ss_pred HHHHHhCC-----HHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 84 QVAAKFGH-----SDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 84 ~~a~~~g~-----~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+|+..+. .+++++|+++|++++..+..+.++
T Consensus 145 ~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 181 (201)
T 3hra_A 145 IEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTA 181 (201)
T ss_dssp HHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCH
Confidence 99999988 999999999999999887766554
No 59
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.79 E-value=1.5e-18 Score=107.52 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=46.4
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++.++...+..+..|.||||+
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 98 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEASADANIQDN-MGRTPLHAAVSAD-----AQGVFQILIRNRATDLDARMHDGTTPLIL 98 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHBTTSCTTCCCTTCCCHHHH
T ss_pred CCchHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC-----CHHHHHHHHHcCCCCcccCCCCCCcHHHH
Confidence 44555555555555555555554332222222 4455555555544 34555555544332334444444444444
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGN 109 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~ 109 (121)
|+..|+.+++++|++.|++++..+
T Consensus 99 A~~~~~~~~~~~Ll~~g~~~~~~~ 122 (223)
T 2f8y_A 99 AARLAVEGMLEDLINSHADVNAVD 122 (223)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred HHHhCcHHHHHHHHHcCCCCcCcC
Confidence 444444444444444444444333
No 60
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.79 E-value=1.7e-18 Score=113.12 Aligned_cols=105 Identities=14% Similarity=0.029 Sum_probs=82.8
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....||||+|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 56 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g-----~~~iv~~Ll~~-g~~~~~~~~~g~t~L 128 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDK-GGLVPLHNACSYG-----HYEVTELLLKH-GACVNAMDLWQFTPL 128 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTCCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCcHHHHHHHCC-----CHHHHHHHHHC-CCCCCCCCCCCCCHH
Confidence 3456889999999999999888887554444444 7889999998888 58888988888 566677788888999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+|+..|+.+++++|+++|++++..+..+...
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~ 160 (351)
T 3utm_A 129 HEAASKNRVEVCSLLLSHGADPTLVNCHGKSA 160 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCcc
Confidence 99999999999999999988887766555443
No 61
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.79 E-value=8.6e-19 Score=111.29 Aligned_cols=95 Identities=22% Similarity=0.202 Sum_probs=60.9
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
..||||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 75 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITA-DHVSPLHEACLGG-----HLSCVKILLKH-GAQVNGVTADWHTPLFN 75 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC-----CHHHHHHHHHC-CCCCCCCCCCCCCHHHH
Confidence 45667777777777777777665433333333 5667777777666 46777777766 45555666667777777
Q ss_pred HHHhCCHHHHHHHHHhCCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQH 107 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~ 107 (121)
|+..|+.+++++|++.|++++.
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~ 97 (261)
T 2xai_A 76 ACVSGSWDCVNLLLQHGASVQP 97 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSC
T ss_pred HHHcCCHHHHHHHHHCCCCCCC
Confidence 7777777777777777766554
No 62
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.79 E-value=1.3e-18 Score=102.55 Aligned_cols=101 Identities=21% Similarity=0.243 Sum_probs=86.1
Q ss_pred CHHHHHHHHcCChHHHHHHhhhhh-hHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 7 HPNLFKAAAAGNAEPFKKDIRRDE-IESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 7 ~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
.++||.|+..|+.+.++.|++... ...... ..|.||||+ +..+ +.+++++|++. +...+..+..|.||||+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~-~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTALQV-MMFG-----STAIALELLKQ-GASPNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCC-TTSCCHHHH-SCTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccC-CCCCcHHHH-HHcC-----CHHHHHHHHHC-CCCCCCcCCCCCCHHHH
Confidence 478999999999999999998721 233333 479999999 8777 69999999998 66778889999999999
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
|+..|+.+++++|++.|++++..+..+..+
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 104 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHGADVNVPDGTGALP 104 (156)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCCCCTTSCCH
T ss_pred HHHcCcHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 999999999999999999998877766554
No 63
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.79 E-value=1.2e-18 Score=111.62 Aligned_cols=108 Identities=14% Similarity=0.184 Sum_probs=81.9
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHhhhhh-hHhhh-------------------------------------hcCCCCCHH
Q 044439 3 PVSIHPNLFKAAAAGNAEPFKKDIRRDE-IESLL-------------------------------------TAQTKNTIL 44 (121)
Q Consensus 3 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~-------------------------------------~~~~g~t~l 44 (121)
+....||||+|+..|+.++++.|++.+. ..... .+..|.|||
T Consensus 108 d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL 187 (276)
T 4hbd_A 108 DSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTAL 187 (276)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHH
Confidence 3567799999999999999999998653 11111 112477888
Q ss_pred HHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHHHhCCHHHHHHHHH-hCCCCCCCCCCCCcCC
Q 044439 45 HINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAAKFGHSDIVSVLIK-EAKSAQHGNEEPERGL 116 (121)
Q Consensus 45 h~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~~~g~~~~~~~Ll~-~ga~~~~~~~~~~~~~ 116 (121)
|+|+..+ +.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++ .|++++..+..+.++.
T Consensus 188 h~A~~~g-----~~~~v~~Ll~~-gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL 254 (276)
T 4hbd_A 188 MLAVSHG-----RVDVVKALLAC-EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTAL 254 (276)
T ss_dssp HHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred HHHHHcC-----CHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHH
Confidence 8888777 58888888887 66677778888888888888888888888888 7888887776665543
No 64
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.78 E-value=8.7e-19 Score=110.76 Aligned_cols=69 Identities=20% Similarity=0.253 Sum_probs=36.2
Q ss_pred CCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCC
Q 044439 39 TKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPE 113 (121)
Q Consensus 39 ~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~ 113 (121)
.|.||||+|+..+ +.+++++|++. +...+..+..|.||||+|+..|+.+++++|+++|++++..+..+.
T Consensus 123 ~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 191 (253)
T 1yyh_A 123 DGTTPLILAARLA-----VEGMLEDLINS-HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 191 (253)
T ss_dssp TCCCHHHHHHHHT-----CSSHHHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCcHHHHHHHcC-----hHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 3444444444444 24455555554 334444555556666666666666666666666665555444443
No 65
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.78 E-value=4.6e-19 Score=117.03 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=81.2
Q ss_pred CCCHHHHHHHHcC--ChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChh-----hhcccC
Q 044439 5 SIHPNLFKAAAAG--NAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSL-----LLKVNA 77 (121)
Q Consensus 5 ~~~~~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~-----~~~~~~ 77 (121)
...|+||+|+..| +.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +.. .+..+.
T Consensus 137 ~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~A~~~g-----~~~~v~~Ll~~-g~~~~~~~~~~~~~ 209 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDK-ADETPLMRAMEFR-----NREALDLMMDT-VPSKSSLRLDYANK 209 (364)
T ss_dssp SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHH-CSCSSSCCTTCCCT
T ss_pred CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcC-----CHHHHHHHHhc-ccccccccccccCC
Confidence 4568888888888 88888888887554444444 7888888888887 58888888887 334 667788
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 78 KGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 78 ~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
.|.||||+|+..|+.+++++|+++|++++..+..+.++
T Consensus 210 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tp 247 (364)
T 3ljn_A 210 QGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVP 247 (364)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 88888888888888888888888888888777666554
No 66
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.78 E-value=1.2e-18 Score=117.46 Aligned_cols=104 Identities=23% Similarity=0.236 Sum_probs=79.2
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...+|||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +.+.+.++..|.||||
T Consensus 277 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g-----~~~~v~~Ll~~-gad~n~~~~~g~t~L~ 349 (437)
T 1n11_A 277 SGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR-MGYTPLHVASHYG-----NIKLVKFLLQH-QADVNAKTKLGYSPLH 349 (437)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS-SCCCHHHHHHHSS-----CSHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC-CCCCHHHHHHHcC-----cHHHHHHHHhc-CCCCCCCCCCCCCHHH
Confidence 355677777777777777777766443333333 6888888888877 58888888887 6667777888889999
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
+|+..|+.+++++|+++|++++..+..+.++
T Consensus 350 ~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 380 (437)
T 1n11_A 350 QAAQQGHTDIVTLLLKNGASPNEVSSDGTTP 380 (437)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCCCCSSSCCH
T ss_pred HHHHCChHHHHHHHHHCcCCCCCCCCCCCCH
Confidence 9999999999999999998888777666554
No 67
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.78 E-value=2.6e-18 Score=106.99 Aligned_cols=99 Identities=18% Similarity=0.177 Sum_probs=83.4
Q ss_pred CCHHHHHHHHcCChHHHHHHhhh-hhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhh----hcccCCCC
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRR-DEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLL----LKVNAKGD 80 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~----~~~~~~~~ 80 (121)
..||||.|+..|+.++++.|++. +......+ ..|.||||+|+..+ +.+++++|++.+.... ...+..|.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~-~~g~t~L~~A~~~g-----~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 76 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRG-AMGETALHIAALYD-----NLEAAMVLMEAAPELVFEPMTSELYEGQ 76 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCC-TTSCCHHHHHHHTT-----CHHHHHHHHHHCGGGGGCCCCSTTTTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCC-CCCCCHHHHHHHcC-----CHHHHHHHHHcCchhccccccccCCCCc
Confidence 57899999999999999999987 44444444 48999999999998 6999999999854332 45577999
Q ss_pred cHHHHHHHhCCHHHHHHHHHhCCCCCCCCC
Q 044439 81 TPLQVAAKFGHSDIVSVLIKEAKSAQHGNE 110 (121)
Q Consensus 81 tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~ 110 (121)
||||+|+..|+.+++++|+++|++++....
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 106 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARGASVSARAT 106 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCcccC
Confidence 999999999999999999999999887554
No 68
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=8.6e-19 Score=120.34 Aligned_cols=100 Identities=19% Similarity=0.104 Sum_probs=83.8
Q ss_pred CCCCHHHHHHHH---cCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCC
Q 044439 4 VSIHPNLFKAAA---AGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGD 80 (121)
Q Consensus 4 ~~~~~~l~~a~~---~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (121)
....||||+|+. .|+.++++.|++.+......+. .|+||||+|+..+ +.+++++|++. +++.+..|..|.
T Consensus 169 ~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~-~g~TpLh~A~~~g-----~~~~v~~Ll~~-ga~~~~~d~~g~ 241 (497)
T 3lvq_E 169 APEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTALHYAALYN-----QPDCLKLLLKG-RALVGTVNEAGE 241 (497)
T ss_dssp CSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCS-SSCCHHHHHTTTT-----CHHHHHHHHHT-CCCCSCCCTTCC
T ss_pred cccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCC-CCCcHHHHHHHcC-----CHHHHHHHHHc-CCCCCCcCCCCC
Confidence 457799999966 9999999999998766655555 8999999999998 69999999998 777888899999
Q ss_pred cHHHHHHHhCCHHHHHHHHHhCCCCCCCCC
Q 044439 81 TPLQVAAKFGHSDIVSVLIKEAKSAQHGNE 110 (121)
Q Consensus 81 tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~ 110 (121)
||||+|+..|+.+++++|+++|++++..+.
T Consensus 242 tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~ 271 (497)
T 3lvq_E 242 TALDIARKKHHKECEELLEQAQAGTFAFPL 271 (497)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTCC-------
T ss_pred CHHHHHHHcCCHHHHHHHHHhCCCCCCCcc
Confidence 999999999999999999999999876544
No 69
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.78 E-value=1e-18 Score=112.41 Aligned_cols=100 Identities=21% Similarity=0.176 Sum_probs=82.0
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....||||+|+..|+.++++.|++.+...... .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 29 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~g~t~L~~A~~~g-----~~~~v~~Ll~~-ga~~~~~d~~g~t~L 99 (285)
T 3kea_A 29 VHGHSASYYAIADNNVRLVCTLLNAGALKNLL---ENEFPLHQAATLE-----DTKIVKILLFS-GLDDSQFDDKGNTAL 99 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC---TTCCHHHHHTTSS-----SCHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC---CCCCHHHHHHHcC-----CHHHHHHHHHC-CCCCCCcCCCCCcHH
Confidence 45678999999999999999999875433222 5889999999888 58899999988 666777888999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEP 112 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~ 112 (121)
|+|+..|+.+++++|+++|++++..+..+
T Consensus 100 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g 128 (285)
T 3kea_A 100 YYAVDSGNMQTVKLFVKKNWRLMFYGKTG 128 (285)
T ss_dssp HHHHHTTCHHHHHHHHHHCGGGGGCSSSG
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCccCCCC
Confidence 99999999999999999999887766554
No 70
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.78 E-value=2.1e-18 Score=112.85 Aligned_cols=115 Identities=18% Similarity=0.157 Sum_probs=82.0
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCC---------------C---------------
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRK---------------R--------------- 53 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~---------------~--------------- 53 (121)
....||||+|+..|+.++++.|++.+......+. .|.||||+|+..++ .
T Consensus 129 ~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~-~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 207 (327)
T 1sw6_A 129 EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDN-MGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 207 (327)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCT-TCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHH
Confidence 4566788888888888888888876543333332 45555555555432 0
Q ss_pred ------ccccHHHHHHHHHhCCh--------------------------------------------hhhcccCCCCcHH
Q 044439 54 ------KNVSTKFIEEILEICPS--------------------------------------------LLLKVNAKGDTPL 83 (121)
Q Consensus 54 ------~~~~~~~~~~ll~~~~~--------------------------------------------~~~~~~~~~~tpL 83 (121)
..|+.+++++|++.... ..+.++..|.|||
T Consensus 208 A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpL 287 (327)
T 1sw6_A 208 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCL 287 (327)
T ss_dssp HHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHH
T ss_pred HHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHH
Confidence 01256777777665110 3667788999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLKLP 119 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 119 (121)
|+|+..|+.+++++|+++|++++..+..+.+++.++
T Consensus 288 h~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 288 NIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323 (327)
T ss_dssp HHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 999999999999999999999999999888887665
No 71
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.78 E-value=3.5e-18 Score=108.91 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHHHc---CChHHHHHHhhhhhhHh-------hh---hcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCC
Q 044439 3 PVSIHPNLFKAAAA---GNAEPFKKDIRRDEIES-------LL---TAQTKNTILHINITSRKRKNVSTKFIEEILEICP 69 (121)
Q Consensus 3 ~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~-------~~---~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~ 69 (121)
+....||||+|+.. |+.++++.|++.+.... .. .+..|.||||+|+..+ +.+++++|++. +
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g-----~~~~v~~Ll~~-g 124 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERR-----NMTLVTLLVEN-G 124 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTT-----CHHHHHHHHHT-T
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcC-----CHHHHHHHHHC-C
Confidence 34678999999987 99999999999854311 10 1237999999999998 69999999998 6
Q ss_pred hhhhcccC--------------CCCcHHHHHHHhCCHHHHHHHHH---hCCCCCCCCCCCCcCC
Q 044439 70 SLLLKVNA--------------KGDTPLQVAAKFGHSDIVSVLIK---EAKSAQHGNEEPERGL 116 (121)
Q Consensus 70 ~~~~~~~~--------------~~~tpL~~a~~~g~~~~~~~Ll~---~ga~~~~~~~~~~~~~ 116 (121)
...+..+. .|.||||+|+..|+.+++++|++ .|++++..+..+.+++
T Consensus 125 a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpL 188 (273)
T 2pnn_A 125 ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVL 188 (273)
T ss_dssp CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHH
Confidence 66666675 79999999999999999999999 9999998877766543
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.78 E-value=3.5e-19 Score=113.58 Aligned_cols=98 Identities=9% Similarity=0.058 Sum_probs=84.6
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhc-------------CCCCCHHHHHHhcCCCccccHHHHHHHHH---h
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTA-------------QTKNTILHINITSRKRKNVSTKFIEEILE---I 67 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-------------~~g~t~lh~a~~~~~~~~~~~~~~~~ll~---~ 67 (121)
....||||+|+..|+.++++.|++.+........ ..|.||||+|+..+ +.+++++|++ .
T Consensus 99 ~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g-----~~~~v~~Ll~~~~~ 173 (273)
T 2pnn_A 99 YKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTN-----QLAIVKFLLQNSWQ 173 (273)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT-----CHHHHHHHHHCSSC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcC-----CHHHHHHHHhcccC
Confidence 3577999999999999999999998554443332 15999999999998 6999999999 6
Q ss_pred CChhhhcccCCCCcHHHHHHHhCC---------HHHHHHHHHhCCCCCC
Q 044439 68 CPSLLLKVNAKGDTPLQVAAKFGH---------SDIVSVLIKEAKSAQH 107 (121)
Q Consensus 68 ~~~~~~~~~~~~~tpL~~a~~~g~---------~~~~~~Ll~~ga~~~~ 107 (121)
+...+.++..|.||||+|+..|+ .+++++|+++|++++.
T Consensus 174 -gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 174 -PADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHP 221 (273)
T ss_dssp -CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred -CCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccc
Confidence 77788889999999999999998 7999999999998864
No 73
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=1.5e-18 Score=97.25 Aligned_cols=88 Identities=17% Similarity=0.257 Sum_probs=76.7
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....++||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|+.. +...+..+..|.|||
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~-~g~tpLh~A~~~~-----~~~~v~~Ll~~-ga~~~~~d~~g~tpl 94 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKDK-NGSTPLHLAARNG-----HLEVVKLLLEA-GADVXAQDKFGKTAF 94 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCccccccCCCcHH
Confidence 3466899999999999999999988554444444 8999999999988 69999999998 667788899999999
Q ss_pred HHHHHhCCHHHHHHH
Q 044439 84 QVAAKFGHSDIVSVL 98 (121)
Q Consensus 84 ~~a~~~g~~~~~~~L 98 (121)
++|+..|+.+++++|
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999986
No 74
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=4.4e-19 Score=117.88 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=83.4
Q ss_pred CHHHHHHHHc-CChHHHHHHhhhhhhHhhhhc-CCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 7 HPNLFKAAAA-GNAEPFKKDIRRDEIESLLTA-QTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 7 ~~~l~~a~~~-g~~~~~~~ll~~~~~~~~~~~-~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
.++||.|+.. |+.++++.|++.+........ ..|.||||+|+..+ +.+++++|++. +.+++..+..|.||||
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g-----~~~iv~~LL~~-Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAAN-----SLLACEFLLQN-GANVNQADSAGRGPLH 273 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCC-----CHHHHHHHHHc-CCCCCCCCCCCCCHHH
Confidence 3578889988 999999988887655544431 37889999999887 58889999888 6677778888999999
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
+|+..|+.+++++|+++|++++..+..+..++
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL 305 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADLGARDSEGRDPL 305 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHH
Confidence 99999999999999999998888777666543
No 75
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.77 E-value=2.6e-18 Score=106.60 Aligned_cols=101 Identities=17% Similarity=0.142 Sum_probs=52.6
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhh--hhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRD--EIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~--~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
..+|||.|+..|+.++++.|++.+ ....... ..|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 72 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-~~g~t~L~~A~~~~-----~~~~~~~Ll~~-g~~~~~~~~~g~t~L 144 (228)
T 2dzn_A 72 GWTPFHIACSVGNLEVVKSLYDRPLKPDLNKIT-NQGVTCLHLAVGKK-----WFEVSQFLIEN-GASVRIKDKFNQIPL 144 (228)
T ss_dssp SCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCC-TTCCCHHHHHHHTT-----CHHHHHHHHHT-TCCSCCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCcccccCC-cCCCCHHHHHHHcC-----CHhHHHHHHHc-CCCccccCCCCCCHH
Confidence 345555555555555555555543 1111112 24555555555555 35555555555 444445555566666
Q ss_pred HHHHHhCCHHHHHHHHHhC-CCCCCCCCCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEA-KSAQHGNEEPE 113 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~g-a~~~~~~~~~~ 113 (121)
|+|+..|+.+++++|++.| ++++..+..+.
T Consensus 145 ~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~ 175 (228)
T 2dzn_A 145 HRAASVGSLKLIELLCGLGKSAVNWQDKQGW 175 (228)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCSCCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHhcCcccccCcCCCCC
Confidence 6666666666666666665 55555444443
No 76
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=1.6e-18 Score=116.81 Aligned_cols=104 Identities=19% Similarity=0.247 Sum_probs=81.8
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....||||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~-~~~t~L~~A~~~g-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L 84 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNV-KVETPLHMAARAG-----HTEVAKYLLQN-KAKVNAKAKDDQTPL 84 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSS-CCCCHHHHHHHHT-----CHHHHHHHHHH-TCCSSCCCTTSCCHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC-----CHHHHHHHHhC-CCCCCCCCCCCCCHH
Confidence 3466889999999999999999887544444344 7889999999888 58899999988 566677788899999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCc
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPER 114 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~ 114 (121)
|+|+..|+.+++++|+++|++++..+..+..
T Consensus 85 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 115 (437)
T 1n11_A 85 HCAARIGHTNMVKLLLENNANPNLATTAGHT 115 (437)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCTTCCC
T ss_pred HHHHHCCCHHHHHHHHhCCCCCCCCCCCCCc
Confidence 9999999999999999999888776655543
No 77
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.77 E-value=2.8e-18 Score=110.30 Aligned_cols=99 Identities=23% Similarity=0.213 Sum_probs=78.9
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....|+||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 57 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g-----~~~~v~~Ll~~-ga~~~~~~~~g~t~L 129 (285)
T 3d9h_A 57 VSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA-DHVSPLHEACLGG-----HLSCVKILLKH-GAQVNGVTADWHTPL 129 (285)
T ss_dssp CCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECT-TCCCHHHHHHHTT-----CHHHHHHHHHT-TCCSSCCCTTCCCHH
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHCC-----cHHHHHHHHHC-CCCCCCCCCCCCCHH
Confidence 4466889999999999999988887544444344 7889999998888 58888888887 566677788888899
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGN 109 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~ 109 (121)
|+|+..|+.+++++|++.|++++.+.
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~ 155 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQHGASVQPES 155 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCSC
T ss_pred HHHHHcCHHHHHHHHHHCCCCCCCCC
Confidence 98888888888888888888776544
No 78
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.77 E-value=1.4e-18 Score=111.63 Aligned_cols=106 Identities=18% Similarity=0.191 Sum_probs=88.0
Q ss_pred HHHHHHHHcCChHHHHHHhhhhhhHhhh-----hcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcH
Q 044439 8 PNLFKAAAAGNAEPFKKDIRRDEIESLL-----TAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTP 82 (121)
Q Consensus 8 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~-----~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tp 82 (121)
.+|+.|+..|+.+.+..+++.+...... .+..|.||||+|+..++ .++.+++++|++. +..++..|..|.||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~--~~~~~~v~~Ll~~-ga~in~~d~~g~Tp 208 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVD--RTSLHIVDFLVQN-SGNLDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCC--TTTHHHHHHHHHH-CSCTTCCCTTCCCH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcc--cchHHHHHHHHHC-CCCccccCCCCCCH
Confidence 4699999999999999998875432211 12479999999999831 1169999999999 67788889999999
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 83 LQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 83 L~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
||+|+..|+.+++++|+++|++++..+..+.+++
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL 242 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEIANESGETPL 242 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHH
Confidence 9999999999999999999999999888776654
No 79
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.77 E-value=1e-18 Score=113.34 Aligned_cols=106 Identities=19% Similarity=0.230 Sum_probs=81.3
Q ss_pred HHHHHHHHcCChHHHHHHhhhhhhHhhh-----hcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcH
Q 044439 8 PNLFKAAAAGNAEPFKKDIRRDEIESLL-----TAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTP 82 (121)
Q Consensus 8 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~-----~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tp 82 (121)
++|+.|+..|+.+.++.++..+...... .+..|.||||+|+..+. .++.+++++|++. +..++..+..|.||
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~--~~~~~iv~~Ll~~-gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVAN--QASLPLVDFIIQN-GGHLDAKAADGNTA 229 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCC--TTTHHHHHHHHHH-SSCTTCCCTTCCCH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcc--cCcHHHHHHHHhc-CCCCCCCCCCCCCH
Confidence 5689999999999888888765443331 23378899999987621 1258889999888 66677788889999
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 83 LQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 83 L~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
||+|+..|+.+++++|+++|++++..+..+.+++
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL 263 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETAL 263 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 9999999999999999999998888777666543
No 80
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.77 E-value=1.5e-18 Score=113.35 Aligned_cols=106 Identities=16% Similarity=0.091 Sum_probs=91.3
Q ss_pred CCCCHHHHHHHHc---CChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCC
Q 044439 4 VSIHPNLFKAAAA---GNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGD 80 (121)
Q Consensus 4 ~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (121)
....++||.|+.. +..++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g-----~~~~v~~Ll~~-ga~~n~~d~~g~ 281 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNK-DFMTPLHVAAERA-----HNDVMEVLHKH-GAKMNALDSLGQ 281 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSC
T ss_pred CCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCC-CCCCHHHHHHHcC-----CHHHHHHHHHC-CCCCCCcCCCCC
Confidence 4467899999999 557899999887655544444 8999999999998 69999999998 677888899999
Q ss_pred cHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 81 TPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 81 tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
||||+|+..|+.+++++|+++|++++..+..+.++.
T Consensus 282 t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal 317 (351)
T 3utm_A 282 TALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAA 317 (351)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChh
Confidence 999999999999999999999999999888776654
No 81
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=6.3e-19 Score=121.02 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=89.1
Q ss_pred HHHHHHHHcCChHHHHHHhhhhhhHhhh-----hcCCCCCHHHHHHh---cCCCccccHHHHHHHHHhCChhhhcccCCC
Q 044439 8 PNLFKAAAAGNAEPFKKDIRRDEIESLL-----TAQTKNTILHINIT---SRKRKNVSTKFIEEILEICPSLLLKVNAKG 79 (121)
Q Consensus 8 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~-----~~~~g~t~lh~a~~---~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 79 (121)
..||.|+..|+.+.++.|++.+...... .+..|.||||+|+. .+ +.+++++|++. +.+++..|..|
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g-----~~~~v~~Ll~~-ga~vn~~d~~g 207 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQA-----SLPLVDFIIQN-GGHLDAKAADG 207 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTT-----THHHHHHHHHH-SCCTTCCCSSS
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccc-----cHHHHHHHHHc-CCCCCccCCCC
Confidence 5799999999999999999986544332 13479999999976 44 69999999999 67788899999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCCC
Q 044439 80 DTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGLK 117 (121)
Q Consensus 80 ~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~~ 117 (121)
.||||+|+..|+.+++++|+++||+++..+..+.+++.
T Consensus 208 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 245 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD 245 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 99999999999999999999999999998887766543
No 82
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.77 E-value=2.6e-18 Score=107.40 Aligned_cols=106 Identities=19% Similarity=0.161 Sum_probs=88.1
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCC-----hhhhcccCC
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICP-----SLLLKVNAK 78 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~-----~~~~~~~~~ 78 (121)
....||||+|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|+..+. ......+..
T Consensus 43 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (236)
T 1ikn_D 43 NLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF-RGNTPLHLACEQG-----CLASVGVLTQSCTTPHLHSILKATNYN 116 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCT-TCCCHHHHHHHHT-----CHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC-----CHHHHHHHHhcccchhHHHHhhccCCC
Confidence 3467899999999999999999988654444444 8999999999998 6999999999743 225677889
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCC-CCCcC
Q 044439 79 GDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNE-EPERG 115 (121)
Q Consensus 79 ~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~-~~~~~ 115 (121)
|.||||+|+..|+.+++++|+++|++++..+. .+..+
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tp 154 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTA 154 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCH
Confidence 99999999999999999999999999887665 55443
No 83
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.76 E-value=4.9e-18 Score=105.98 Aligned_cols=97 Identities=20% Similarity=0.234 Sum_probs=43.4
Q ss_pred HHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHH
Q 044439 8 PNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAA 87 (121)
Q Consensus 8 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~ 87 (121)
+|||.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++.++...+..+..|.||||+|+
T Consensus 46 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~ 119 (237)
T 3b7b_A 46 TPLMEAAENNHLEAVKYLIKAGALVDPKDA-EGSTCLHLAAKKG-----HYEVVQYLLSNGQMDVNCQDDGGWTPMIWAT 119 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCCCCCT-TSCCHHHHHHHTT-----CHHHHHHHHTTTCCCTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHhCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcC-----CHHHHHHHHhCCCCCcccCCCCCCCHHHHHH
Confidence 344444444444444444433222211111 3444444444444 3455555554432344444445555555555
Q ss_pred HhCCHHHHHHHHHhCCCCCCCCC
Q 044439 88 KFGHSDIVSVLIKEAKSAQHGNE 110 (121)
Q Consensus 88 ~~g~~~~~~~Ll~~ga~~~~~~~ 110 (121)
..|+.+++++|++.|++++..+.
T Consensus 120 ~~~~~~~~~~Ll~~g~~~~~~~~ 142 (237)
T 3b7b_A 120 EYKHVDLVKLLLSKGSDINIRDN 142 (237)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HcCCHHHHHHHHHCCCCCCccCC
Confidence 55555555555555555444333
No 84
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.76 E-value=1.4e-18 Score=111.33 Aligned_cols=93 Identities=18% Similarity=0.176 Sum_probs=82.6
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....||||.|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++..+.+.+..|..|.|||
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~-~G~TpLh~A~~~g-----~~~iv~~Ll~~~gad~~~~d~~g~TpL 254 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLACEADVNVQDD-DGSTALMCACEHG-----HKEIAGLLLAVPSCDISLTDRDGSTAL 254 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT-----CHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHCC-----CHHHHHHHHhcCCCCCcCcCCCCCCHH
Confidence 3477999999999999999999998665555555 8999999999998 699999999944778888999999999
Q ss_pred HHHHHhCCHHHHHHHHHhC
Q 044439 84 QVAAKFGHSDIVSVLIKEA 102 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~g 102 (121)
++|+..|+.+++++|++++
T Consensus 255 ~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 255 MVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHhcc
Confidence 9999999999999999885
No 85
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=7.3e-18 Score=107.25 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=47.4
Q ss_pred HHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHH
Q 044439 8 PNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAA 87 (121)
Q Consensus 8 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~ 87 (121)
++||.|+..|+.++++.|++.+.......+..|.||||+|+..+ +.+++++|++. +...+..+..|.||||+|+
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g-----~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~ 80 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS-----REDIVELLLRH-GADPVLRKKNGATPFLLAA 80 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTCCCHHHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcC-----CHHHHHHHHHc-CCCCcccCCCCCCHHHHHH
Confidence 45555555555555555555433222221224455555555554 35555555554 3334444555555555555
Q ss_pred HhCCHHHHHHHHHhCCCCCCCC
Q 044439 88 KFGHSDIVSVLIKEAKSAQHGN 109 (121)
Q Consensus 88 ~~g~~~~~~~Ll~~ga~~~~~~ 109 (121)
..|+.+++++|+++|++++..+
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~~~~ 102 (285)
T 1wdy_A 81 IAGSVKLLKLFLSKGADVNECD 102 (285)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBC
T ss_pred HcCCHHHHHHHHHcCCCCCccC
Confidence 5555555555555555544433
No 86
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.76 E-value=3.2e-18 Score=108.32 Aligned_cols=107 Identities=21% Similarity=0.214 Sum_probs=87.8
Q ss_pred CCCCHHHHHHH---HcCChHHHHHHhhhhhhHhh--------hh--cCCCCCHHHHHHhcCCCccccHHHHHHHHHhCCh
Q 044439 4 VSIHPNLFKAA---AAGNAEPFKKDIRRDEIESL--------LT--AQTKNTILHINITSRKRKNVSTKFIEEILEICPS 70 (121)
Q Consensus 4 ~~~~~~l~~a~---~~g~~~~~~~ll~~~~~~~~--------~~--~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~ 70 (121)
....||||.|+ ..|+.++++.|++.+..... .. +..|.||||+|+..+ +.+++++|++. +.
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g-----~~~~v~~Ll~~-ga 117 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERR-----CKHYVELLVEK-GA 117 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTT-----CHHHHHHHHHT-TC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcC-----CHHHHHHHHhC-CC
Confidence 44779999999 67999999999987543111 11 126899999999998 69999999998 66
Q ss_pred hhhccc--------------CCCCcHHHHHHHhCCHHHHHHHHH---hCCCCCCCCCCCCcCC
Q 044439 71 LLLKVN--------------AKGDTPLQVAAKFGHSDIVSVLIK---EAKSAQHGNEEPERGL 116 (121)
Q Consensus 71 ~~~~~~--------------~~~~tpL~~a~~~g~~~~~~~Ll~---~ga~~~~~~~~~~~~~ 116 (121)
..+..+ ..|.||||+|+..|+.+++++|++ .|++++..+..+.+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpL 180 (260)
T 3jxi_A 118 DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVL 180 (260)
T ss_dssp CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred CcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHH
Confidence 666666 589999999999999999999999 9999998877766543
No 87
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=6.5e-18 Score=107.48 Aligned_cols=96 Identities=16% Similarity=0.184 Sum_probs=51.7
Q ss_pred CHHHHHHHHcCC----hHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcH
Q 044439 7 HPNLFKAAAAGN----AEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTP 82 (121)
Q Consensus 7 ~~~l~~a~~~g~----~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tp 82 (121)
.++||.|+..++ .++++.|++.+......+. .|.||||+|+..+ +.+++++|++..+...+..+..|.||
T Consensus 183 ~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~~g~~~~~~~~~g~t~ 256 (285)
T 1wdy_A 183 RNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE-RGKTPLILAVEKK-----HLGLVQRLLEQEHIEINDTDSDGKTA 256 (285)
T ss_dssp CCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHSSSCCTTCCCTTSCCH
T ss_pred CCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcC-----CHHHHHHHHhccCCCccccCCCCCcH
Confidence 344444444444 4444444443222222222 4566666666655 46666666663355555556666666
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCCCC
Q 044439 83 LQVAAKFGHSDIVSVLIKEAKSAQHG 108 (121)
Q Consensus 83 L~~a~~~g~~~~~~~Ll~~ga~~~~~ 108 (121)
|++|+..|+.+++++|+++|++++..
T Consensus 257 l~~A~~~~~~~i~~~Ll~~Ga~~~~~ 282 (285)
T 1wdy_A 257 LLLAVELKLKKIAELLCKRGASTDCG 282 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHHSSCSCCS
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCcc
Confidence 66666666666666666666655543
No 88
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.76 E-value=4.4e-18 Score=108.40 Aligned_cols=98 Identities=15% Similarity=0.107 Sum_probs=84.3
Q ss_pred CCCCCHHHHHHHHcCChHHHHHHhhhhhh---HhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCC
Q 044439 3 PVSIHPNLFKAAAAGNAEPFKKDIRRDEI---ESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKG 79 (121)
Q Consensus 3 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~---~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 79 (121)
+....||||.|+..|+.++++.|++.+.. ..... ..|.||||+|+..+ +.+++++|++. +...+..+..|
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~~g~t~L~~A~~~g-----~~~~v~~Ll~~-ga~~~~~~~~g 78 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQN-DLGQTALHLAAILG-----EASTVEKLYAA-GAGVLVAERGG 78 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCC-TTSCCHHHHHHHHT-----CHHHHHHHHHT-TCCSSCCCTTS
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccC-CCCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCCCCCC
Confidence 35678999999999999999999987554 22233 47999999999998 69999999998 66777889999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhCCCCCC
Q 044439 80 DTPLQVAAKFGHSDIVSVLIKEAKSAQH 107 (121)
Q Consensus 80 ~tpL~~a~~~g~~~~~~~Ll~~ga~~~~ 107 (121)
.||||+|+..|+.+++++|++.|++.+.
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~ 106 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPR 106 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCC
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCch
Confidence 9999999999999999999999986543
No 89
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.75 E-value=5.6e-18 Score=112.52 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=84.5
Q ss_pred CCCCHHHHHHHHcC---ChHHHHHHhhhhhhHhh-------hhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhh
Q 044439 4 VSIHPNLFKAAAAG---NAEPFKKDIRRDEIESL-------LTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLL 73 (121)
Q Consensus 4 ~~~~~~l~~a~~~g---~~~~~~~ll~~~~~~~~-------~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~ 73 (121)
....++||.|+..+ +.++++.|++.+..... ..+..|.||||+|+..+ +.+++++|+..++...+
T Consensus 233 ~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g-----~~~~v~~Ll~~~~~~~n 307 (373)
T 2fo1_E 233 RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVS-----NMPIVKYLVGEKGSNKD 307 (373)
T ss_dssp TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSC-----CHHHHHHHHHHSCCCTT
T ss_pred CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhC-----CHHHHHHHHHhcCCCcc
Confidence 34556777777776 67777777766433221 11236899999999988 69999999988668888
Q ss_pred cccCCCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 74 KVNAKGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 74 ~~~~~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
..+..|.||||+|+..|+.+++++|+++|++++..+..+.+.
T Consensus 308 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~ 349 (373)
T 2fo1_E 308 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTA 349 (373)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCH
Confidence 899999999999999999999999999999999887766554
No 90
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.75 E-value=2.6e-19 Score=112.11 Aligned_cols=101 Identities=15% Similarity=0.068 Sum_probs=86.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhccc-CCCCcH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVN-AKGDTP 82 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~-~~~~tp 82 (121)
....||||+|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+ ..|.||
T Consensus 52 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~-~g~tpLh~A~~~g-----~~~~v~~Ll~~-ga~~~~~~~~~g~tp 124 (229)
T 2vge_A 52 EEGITALHNAICGANYSIVDFLITAGANVNSPDS-HGWTPLHCAASCN-----DTVICMALVQH-GAAIFATTLSDGATA 124 (229)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT-----CHHHHHHHHTT-TCCTTCCCSSTTCCT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCcccccCCCCCCH
Confidence 4567999999999999999999998655555444 8999999999988 69999999998 55555554 699999
Q ss_pred HHHH--HHhCCHHHHHHHHHhCCCCCCCCCC
Q 044439 83 LQVA--AKFGHSDIVSVLIKEAKSAQHGNEE 111 (121)
Q Consensus 83 L~~a--~~~g~~~~~~~Ll~~ga~~~~~~~~ 111 (121)
|++| +..|+.+++++|++.|++++..+..
T Consensus 125 L~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~ 155 (229)
T 2vge_A 125 FEKCDPYREGYADCATYLADVEQSMGLMNSG 155 (229)
T ss_dssp GGGCCTTSTTHHHHHHHHHHHHHHTTTSGGG
T ss_pred HHHHHHHhcChHHHHHHHHHcCCCcccccCC
Confidence 9999 9999999999999999998876543
No 91
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.75 E-value=5e-18 Score=110.16 Aligned_cols=94 Identities=20% Similarity=0.153 Sum_probs=83.2
Q ss_pred CCCCHHHHHHHHc---CChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCC
Q 044439 4 VSIHPNLFKAAAA---GNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGD 80 (121)
Q Consensus 4 ~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (121)
....|+||+|+.. |+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +.+.+..|..|.
T Consensus 188 ~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-~G~TpLh~A~~~g-----~~~~v~~Ll~~-gad~~~~d~~G~ 260 (301)
T 2b0o_E 188 APEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTALHYAALYN-----QPDCLKLLLKG-RALVGTVNEAGE 260 (301)
T ss_dssp SCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT-TCCCHHHHHHHTT-----CHHHHHHHHHT-TCCCSCCCTTSC
T ss_pred CCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCcCCCCC
Confidence 3466899999997 899999999998665555454 8999999999998 69999999998 677888899999
Q ss_pred cHHHHHHHhCCHHHHHHHHHhCCC
Q 044439 81 TPLQVAAKFGHSDIVSVLIKEAKS 104 (121)
Q Consensus 81 tpL~~a~~~g~~~~~~~Ll~~ga~ 104 (121)
|||++|+..|+.+++++|+++|++
T Consensus 261 TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 261 TALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHhcCC
Confidence 999999999999999999999985
No 92
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.74 E-value=2.4e-17 Score=102.60 Aligned_cols=102 Identities=20% Similarity=0.239 Sum_probs=67.6
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...++||.|+..|+.++++.|++.+..........|.||||+|+..+ +.+++++|++. +...+..+..|.|||+
T Consensus 41 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g~t~l~ 114 (240)
T 3eu9_A 41 ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG-----HLSMVVQLMKY-GADPSLIDGEGCSCIH 114 (240)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC-----CHHHHHHHHHc-CCCCcccCCCCCCHHH
Confidence 34567777777777777777776644333333334677777777766 47777777776 4555566777777777
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCC
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEP 112 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~ 112 (121)
+|+..|+.+++++|++.|++++..+..+
T Consensus 115 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~g 142 (240)
T 3eu9_A 115 LAAQFGHTSIVAYLIAKGQDVDMMDQNG 142 (240)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHcCHHHHHHHHHhcCCCccccCCCC
Confidence 7777777777777777777666555444
No 93
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.74 E-value=3.5e-17 Score=108.02 Aligned_cols=108 Identities=14% Similarity=0.174 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhh----hhhHhhh----------------hcCCCCCHHHHHHhcCCCccccHHHHHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRR----DEIESLL----------------TAQTKNTILHINITSRKRKNVSTKFIEEI 64 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~----~~~~~~~----------------~~~~g~t~lh~a~~~~~~~~~~~~~~~~l 64 (121)
...+|||.|+..|+.++++.|++. +...... .+..|.||||+|+..+.. +.+++++|
T Consensus 83 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~---~~~~v~~L 159 (364)
T 3ljn_A 83 HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPE---YLEMIKIL 159 (364)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGG---GHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCc---hHHHHHHH
Confidence 455677777777777777777765 2222220 223688999999987710 28999999
Q ss_pred HHhCChhhhcccCCCCcHHHHHHHhCCHHHHHHHHHhCCC-----CCCCCCCCCcCC
Q 044439 65 LEICPSLLLKVNAKGDTPLQVAAKFGHSDIVSVLIKEAKS-----AQHGNEEPERGL 116 (121)
Q Consensus 65 l~~~~~~~~~~~~~~~tpL~~a~~~g~~~~~~~Ll~~ga~-----~~~~~~~~~~~~ 116 (121)
++. +...+..+..|.||||+|+..|+.+++++|+++|++ ++..+..+...+
T Consensus 160 l~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L 215 (364)
T 3ljn_A 160 VQL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHL 215 (364)
T ss_dssp HHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTT
T ss_pred HHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHH
Confidence 998 667778899999999999999999999999999998 777666665554
No 94
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.74 E-value=2.1e-17 Score=103.24 Aligned_cols=93 Identities=13% Similarity=0.198 Sum_probs=52.6
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhh----hhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCC
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRR----DEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKG 79 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~----~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 79 (121)
....++||.|+..|+.++++.|++. +......+ ..|.||||+|+..+ +.+++++|++. +...+..+..|
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~~~~~~~g 79 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN-NLRQTPLHLAVITT-----LPSVVRLLVTA-GASPMALDRHG 79 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTS
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCccc-ccCCCHHHHHHHcC-----CHHHHHHHHHc-CCCccccCCCC
Confidence 3455666666666666666666652 11111112 24666666666665 46666666665 44444555666
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhCC
Q 044439 80 DTPLQVAAKFGHSDIVSVLIKEAK 103 (121)
Q Consensus 80 ~tpL~~a~~~g~~~~~~~Ll~~ga 103 (121)
.||||+|+..|+.+++++|++.++
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~ 103 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAA 103 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC
Confidence 666666666666666666666655
No 95
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.74 E-value=2.8e-17 Score=107.52 Aligned_cols=101 Identities=15% Similarity=0.126 Sum_probs=84.5
Q ss_pred CCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCCh---------------
Q 044439 6 IHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPS--------------- 70 (121)
Q Consensus 6 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~--------------- 70 (121)
..++||.|+..|++++|+.|++.+..........|+||||+|+..+ +.+++++|++.+..
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g-----~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS-----REDIVELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT-----CHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcC-----CHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence 3578999999999999999999876555555546899999999998 69999999987432
Q ss_pred -----------------hhhcccCCCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCC
Q 044439 71 -----------------LLLKVNAKGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEE 111 (121)
Q Consensus 71 -----------------~~~~~~~~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~ 111 (121)
..+..+..|.|||++|+..|+.+++++|+++|++++.....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~ 157 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKT 157 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCC
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcc
Confidence 23456788999999999999999999999999998865543
No 96
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.74 E-value=1.7e-19 Score=109.79 Aligned_cols=102 Identities=12% Similarity=0.070 Sum_probs=56.6
Q ss_pred HHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHH
Q 044439 8 PNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAA 87 (121)
Q Consensus 8 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~ 87 (121)
++|+.|+..|+.+.++.++..+. ....+..|+||||+|+..++. .++.+++++|+.. +++++.++..|.||||+|+
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~-~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNND-EARYKISMFLINK-GADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCH-HHHHHHHHHHHHT-TCCSSCCCTTCCCTHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCc-chHHHHHHHHHHC-CCCCCCCCCCCCcHHHHHH
Confidence 34666666666666666655421 122212466666666665520 0013466666665 5555666666666666666
Q ss_pred HhCC------HHHHHHHHHhCCCCCCCCCCCC
Q 044439 88 KFGH------SDIVSVLIKEAKSAQHGNEEPE 113 (121)
Q Consensus 88 ~~g~------~~~~~~Ll~~ga~~~~~~~~~~ 113 (121)
..|+ .+++++|+++|++++..+..+.
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ 115 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYK 115 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence 6655 3556666666666666554443
No 97
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.74 E-value=1.9e-18 Score=108.59 Aligned_cols=105 Identities=14% Similarity=0.077 Sum_probs=63.9
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
..+.||||.|+..++.+.++.+++.+..... +. .+.|+||+|+..+ +.++++.|++. +...+..+..|.|||
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~-~~~t~L~~A~~~g-----~~~~v~~Ll~~-g~~~~~~d~~g~t~L 74 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NP-LPLALLLDSSLEG-----EFDLVQRIIYE-VDDPSLPNDEGITAL 74 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHT-----CHHHHHHHTST-TSSCCCCCTTSCCHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCccc-Cc-hhhHHHHHHHHcC-----CHHHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 3578999999999999999999998655443 34 7899999999998 59999999988 557788899999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
|+|+..|+.+++++|+++|++++..+..+.+++
T Consensus 75 ~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL 107 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPL 107 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 999999999999999999999998877666543
No 98
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.73 E-value=4.5e-18 Score=103.51 Aligned_cols=111 Identities=8% Similarity=-0.049 Sum_probs=91.2
Q ss_pred CCCHHHHHHHHcCCh----HHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCcc-ccHHHHHHHHHhCChhhhcccCCC
Q 044439 5 SIHPNLFKAAAAGNA----EPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKN-VSTKFIEEILEICPSLLLKVNAKG 79 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~----~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~-~~~~~~~~ll~~~~~~~~~~~~~~ 79 (121)
...||||+|+..|+. ++++.|++.+......+. .|+||||+|+..++... ...+++++|+.. +.+++.+|..|
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~-~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~g 114 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTK-EGTTLFFPLFQGGGNDITGTTELCKIFLEK-GADITALYKPY 114 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCT-TCCCTHHHHHHHCTTCHHHHHHHHHHHHHT-TCCSSSCBGGG
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcCCcchhhHHHHHHHHHHC-CCCCCccCCCc
Confidence 467999999999985 489999998776666555 89999999998873210 115789999998 77888899999
Q ss_pred C-cHHHHHHHhCCH-----HHHHHHHH-hCCCCCCCCCCCCcCCC
Q 044439 80 D-TPLQVAAKFGHS-----DIVSVLIK-EAKSAQHGNEEPERGLK 117 (121)
Q Consensus 80 ~-tpL~~a~~~g~~-----~~~~~Ll~-~ga~~~~~~~~~~~~~~ 117 (121)
. ||||+|+..+.. +++++|++ .|++++..+..|.++++
T Consensus 115 ~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE 159 (186)
T ss_dssp TBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred CchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHH
Confidence 9 999999998884 48999999 99999999988876654
No 99
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.73 E-value=1.6e-17 Score=106.78 Aligned_cols=97 Identities=19% Similarity=0.189 Sum_probs=43.4
Q ss_pred CHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCC-CCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHH
Q 044439 7 HPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTK-NTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQV 85 (121)
Q Consensus 7 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g-~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~ 85 (121)
.||||+|+..|+.++++.|++.+........ .| .||||+|+..+ +.+++++|++.+..... ...|.||||+
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~~t~L~~A~~~~-----~~~~v~~Ll~~g~~~~~--~~~g~t~L~~ 167 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAVMLN-----DVSIVSYFLSEIPSTFD--LAILLSCIHI 167 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCSS-SGGGSHHHHHHHTT-----CHHHHHHHHTTSCTTCC--CSTHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCCCHHHHHHHcC-----CHHHHHHHHhCCCcccc--ccCCccHHHH
Confidence 3444444444444444444444332222222 33 34555544444 34444544444221100 1144555555
Q ss_pred HHHhCCHHHHHHHHHhCCCCCCCCCC
Q 044439 86 AAKFGHSDIVSVLIKEAKSAQHGNEE 111 (121)
Q Consensus 86 a~~~g~~~~~~~Ll~~ga~~~~~~~~ 111 (121)
|+..|+.+++++|+++|++++..+..
T Consensus 168 A~~~g~~~~v~~Ll~~gad~n~~~~~ 193 (285)
T 3kea_A 168 TIKNGHVDMMILLLDYMTSTNTNNSL 193 (285)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCTTCCC
T ss_pred HHHcChHHHHHHHHHcCCCCCcccCC
Confidence 55555555555555555555544433
No 100
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.73 E-value=3.3e-17 Score=102.02 Aligned_cols=104 Identities=16% Similarity=0.088 Sum_probs=87.0
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQ 84 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~ 84 (121)
...++|+.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++.+.......+..+.|||+
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVRQPDK-ENVTLLHWAAINN-----RIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT-----CHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcCCCCC-CCCCHHHHHHHhC-----CHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 456789999999999999999998654444444 7999999999998 6999999999865555555666999999
Q ss_pred HHHHhCCHHHHHHHHHhCCCCCCCCCCCCc
Q 044439 85 VAAKFGHSDIVSVLIKEAKSAQHGNEEPER 114 (121)
Q Consensus 85 ~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~ 114 (121)
+|+..|+.+++++|++.|++++..+..+..
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 111 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCS 111 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCC
Confidence 999999999999999999998876665544
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.72 E-value=2e-18 Score=107.18 Aligned_cols=104 Identities=11% Similarity=0.020 Sum_probs=75.7
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhh-hhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRR-DEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTP 82 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tp 82 (121)
....|+||+|+..|+.++++.|++. +......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.||
T Consensus 104 ~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~-~g~tpL~~A~~~~-----~~~~v~~Ll~~-ga~~~~~~~~g~t~ 176 (222)
T 3ehr_A 104 KAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNK-LGDTALHAAAWKG-----YADIVQLLLAK-GARTDLRNIEKKLA 176 (222)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCT-TSCCHHHHHHHHT-----CHHHHHHHHHH-TCCSCCCCTTSCCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCccccCCCCCH
Confidence 4567999999999999999999987 444444444 8999999999998 69999999999 67778889999999
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCc
Q 044439 83 LQVAAKFGHSDIVSVLIKEAKSAQHGNEEPER 114 (121)
Q Consensus 83 L~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~ 114 (121)
|++|+..|+.++++.|++.|+.....+..+.-
T Consensus 177 l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~l 208 (222)
T 3ehr_A 177 FDMATNAACASLLKKKQGTDAVRTLSNAEDYL 208 (222)
T ss_dssp HHHCCSHHHHHHHC------------------
T ss_pred HHHhcchhHHHHHHHHhccchhhhccchhhhc
Confidence 99999999999999999999988776654443
No 102
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.72 E-value=2e-17 Score=108.16 Aligned_cols=93 Identities=11% Similarity=0.039 Sum_probs=72.0
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhh-hhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRD-EIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
...||||.|+..|+.+.++.|+... ......+ ..|.||||+|+..+ +.+++++|++. ++++ ...+||
T Consensus 238 ~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d-~~G~TpL~~A~~~g-----~~~iv~~Ll~~-GAd~-----n~~~~L 305 (337)
T 4g8k_A 238 RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD-SDGKTALLLAVELK-----LKKIAELLCKR-GAST-----DCGDLV 305 (337)
T ss_dssp GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBC-TTSCBHHHHHHHTT-----CHHHHHHHHTT-SCSS-----TTCCHH
T ss_pred CCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcC-CCCCCHHHHHHHcC-----CHHHHHHHHHC-CCCC-----CCCCHH
Confidence 4568999999999999999988763 3333333 47999999999888 59999999988 4433 345699
Q ss_pred HHHHHhCCHHHHHHHHHhCCCCCCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKSAQHGN 109 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~~~~~~ 109 (121)
++|+..|+.+++++|+++||++|..+
T Consensus 306 ~~A~~~~~~~iv~~Ll~~GA~~d~~~ 331 (337)
T 4g8k_A 306 MTARRNYDHSLVKVLLSHGAKEDFHP 331 (337)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCC----
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCCCC
Confidence 99999999999999999999888644
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.71 E-value=4.1e-17 Score=108.47 Aligned_cols=94 Identities=18% Similarity=0.120 Sum_probs=82.7
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....|+||+|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +.+.+..|..|.|||
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~-~G~TpLh~A~~~g-----~~~~v~~LL~~-Gad~~~~d~~G~TpL 305 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADS-AGRGPLHHATILG-----HTGLACLFLKR-GADLGARDSEGRDPL 305 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC-----cHHHHHHHHHC-cCCCCCcCCCCCCHH
Confidence 4467899999999999999999998665555444 8999999999998 69999999998 677788899999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKS 104 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~ 104 (121)
|+|+..|+.+++++|+..+..
T Consensus 306 ~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 306 TIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999988753
No 104
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.71 E-value=2e-17 Score=108.24 Aligned_cols=101 Identities=13% Similarity=-0.025 Sum_probs=76.5
Q ss_pred HHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHHH
Q 044439 9 NLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAAK 88 (121)
Q Consensus 9 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~~ 88 (121)
.+|.++..+..++++.|++.+.......+..|.||||+|+..+ +.+++++|++. +..++..+..|.||||+|+.
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g-----~~~~v~~Ll~~-Gad~n~~d~~g~TpLh~A~~ 173 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIA-----NLELVKHLVKH-GSNRLYGDNMGESCLVKAVK 173 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTBCCTTCCCHHHHHHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcC-----CHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHH
Confidence 3577888888888888887755454423348999999999998 69999999998 67778889999999999999
Q ss_pred hCC---HHHHHHHHHhC-CCCCCCCCCCCcC
Q 044439 89 FGH---SDIVSVLIKEA-KSAQHGNEEPERG 115 (121)
Q Consensus 89 ~g~---~~~~~~Ll~~g-a~~~~~~~~~~~~ 115 (121)
.|+ .+++..|++++ ++++..+..+..+
T Consensus 174 ~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tp 204 (327)
T 1sw6_A 174 SVNNYDSGTFEALLDYLYPCLILEDSMNRTI 204 (327)
T ss_dssp SSHHHHTTCHHHHHHHHGGGGGEECTTCCCH
T ss_pred hcccccHHHHHHHHHhhhccccCCCCCCCCH
Confidence 888 57777777776 6667666655544
No 105
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.71 E-value=3.6e-17 Score=108.66 Aligned_cols=93 Identities=15% Similarity=0.114 Sum_probs=80.6
Q ss_pred CCCHHHHHHHHcCChHHHHHHhhhh-hhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 5 SIHPNLFKAAAAGNAEPFKKDIRRD-EIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 5 ~~~~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
...++||.|+..|+.++++.|++.+ ......+ ..|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 278 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d-~~g~TpL~~A~~~g-----~~~iv~~Ll~~-gad~~~~d~~g~t~l 350 (373)
T 2fo1_E 278 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQD-EDGKTPIMLAAQEG-----RIEVVMYLIQQ-GASVEAVDATDHTAR 350 (373)
T ss_dssp CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCC-TTCCCHHHHHHHHT-----CHHHHHHHHHT-TCCSSCCCSSSCCHH
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcC-CCCCCHHHHHHHcC-----CHHHHHHHHHc-CCCccCCCCCCCCHH
Confidence 5678999999999999999999875 3333334 48999999999998 69999999998 677788899999999
Q ss_pred HHHHHhCCHHHHHHHHHhCCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAKS 104 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga~ 104 (121)
++|+..|+.+++++|++++++
T Consensus 351 ~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 351 QLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHTTCHHHHHHHHTTC--
T ss_pred HHHHHcCCHHHHHHHHhcCcc
Confidence 999999999999999999874
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.68 E-value=2.4e-16 Score=85.56 Aligned_cols=72 Identities=22% Similarity=0.367 Sum_probs=63.2
Q ss_pred CCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 39 TKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 39 ~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
.|+||||+|+..+ +.+++++|++. +...+.++..|.||||+|+..|+.+++++|++.|++++..+..+.++.
T Consensus 1 ~g~t~L~~A~~~~-----~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l 72 (93)
T 1n0q_A 1 NGRTPLHLAARNG-----HLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72 (93)
T ss_dssp --CCHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCcHHHHHHHcC-----CHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 3789999999998 59999999998 667788899999999999999999999999999999988877666543
No 107
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.67 E-value=2e-16 Score=95.60 Aligned_cols=81 Identities=15% Similarity=0.094 Sum_probs=69.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....||||+|+..|+.++++.|++.+..........|+||||+|+..+ +.+++++|++. +...+.++..|.|||
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~-----~~~~v~~Ll~~-ga~~~~~d~~g~tpl 147 (183)
T 3deo_A 74 ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV-----RPEVVEALVEL-GADIEVEDERGLTAL 147 (183)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT-----CHHHHHHHHHH-TCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC-----cHHHHHHHHHc-CCCCcCCCCCCCCHH
Confidence 456799999999999999999999866555555347999999999988 69999999999 677788899999999
Q ss_pred HHHHHhC
Q 044439 84 QVAAKFG 90 (121)
Q Consensus 84 ~~a~~~g 90 (121)
++|+..+
T Consensus 148 ~~A~~~~ 154 (183)
T 3deo_A 148 ELAREIL 154 (183)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9998763
No 108
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.67 E-value=2.1e-16 Score=99.64 Aligned_cols=94 Identities=16% Similarity=0.153 Sum_probs=80.5
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....||||.|+..|+.++++.|++.+......+...|.||||+|+..+ +.+++++|+.. +...+..+..|.|||
T Consensus 75 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g-----~~~~v~~Ll~~-ga~~~~~d~~g~t~l 148 (244)
T 3ui2_A 75 ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV-----RPEVVEALVEL-GADIEVEDERGLTAL 148 (244)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTCCCHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC-----CHHHHHHHHHC-CCCCCCCCCCCCcHH
Confidence 446789999999999999999999866555555347999999999998 69999999998 677788899999999
Q ss_pred HHHH----------------HhCCHHHHHHHHHhCC
Q 044439 84 QVAA----------------KFGHSDIVSVLIKEAK 103 (121)
Q Consensus 84 ~~a~----------------~~g~~~~~~~Ll~~ga 103 (121)
|+|+ ..|+.+++++|++.+.
T Consensus 149 ~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 149 ELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 8887 6688999999998744
No 109
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.65 E-value=1.5e-17 Score=96.19 Aligned_cols=93 Identities=12% Similarity=0.092 Sum_probs=76.6
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....+|||.|+..|+.++++.|++.+........ .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 41 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~-----~~~~v~~Ll~~-ga~~~~~~~~g~tpl 113 (137)
T 3c5r_A 41 HAGWTPLHEACNHGHLKVVELLLQHKALVNTTGY-QNDSPLHDAAKNG-----HVDIVKLLLSY-GASRNAVNIFGLRPV 113 (137)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCG-GGCCHHHHHHHTT-----CHHHHHHHHHT-TCCTTCCCTTSCCGG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCCCCCCCCHH
Confidence 4567899999999999999999988655444444 7899999999988 69999999998 677788899999999
Q ss_pred HHHHHhCCHHHHHHHHHhCC
Q 044439 84 QVAAKFGHSDIVSVLIKEAK 103 (121)
Q Consensus 84 ~~a~~~g~~~~~~~Ll~~ga 103 (121)
++|+..+..+++.+|.+.++
T Consensus 114 ~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 114 DYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp GGCCCHHHHHHHSCC-----
T ss_pred HHHhhccHHHHHhhcccccc
Confidence 99999988899888877654
No 110
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.64 E-value=1.4e-15 Score=86.40 Aligned_cols=79 Identities=13% Similarity=-0.007 Sum_probs=67.4
Q ss_pred CCCCHHHHHHHHcCChHHHHHHhhhhhhHhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHH
Q 044439 4 VSIHPNLFKAAAAGNAEPFKKDIRRDEIESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPL 83 (121)
Q Consensus 4 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL 83 (121)
....||||+|+..|+.++++.|++.+......+. .|.||||+|+..+ +.+++++|++. +...+..+..|.|||
T Consensus 38 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~tpL~~A~~~~-----~~~~v~~Ll~~-ga~~~~~~~~g~t~l 110 (123)
T 3aaa_C 38 EGGRKPLHYAADCGQLEILEFLLLKGADINAPDK-HHITPLLSAVYEG-----HVSCVKLLLSK-GADKTVKGPDGLTAF 110 (123)
T ss_dssp TTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 3567899999999999999999988655544444 8999999999998 69999999998 667788899999999
Q ss_pred HHHHHh
Q 044439 84 QVAAKF 89 (121)
Q Consensus 84 ~~a~~~ 89 (121)
++|...
T Consensus 111 ~~A~~~ 116 (123)
T 3aaa_C 111 EATDNQ 116 (123)
T ss_dssp HHCCCH
T ss_pred HHhCCH
Confidence 999443
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.59 E-value=6.4e-16 Score=103.02 Aligned_cols=91 Identities=15% Similarity=0.225 Sum_probs=60.0
Q ss_pred CHHHHHHHHcCChHHHHHHhhhhhhHh---hhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCCh----hhhcccCCC
Q 044439 7 HPNLFKAAAAGNAEPFKKDIRRDEIES---LLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPS----LLLKVNAKG 79 (121)
Q Consensus 7 ~~~l~~a~~~g~~~~~~~ll~~~~~~~---~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~~~~ 79 (121)
.||||.|+..|+.++++.|++.+.... .... .+.||||+|+..| +.+++++|++.++. .....+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~-~~~tpL~~Aa~~G-----~~eiv~~Ll~~gad~~~~~i~~~~--- 163 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA-ENYQAFRLAAENG-----HLHVLNRLCELAPTEIMAMIQAEN--- 163 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CH-HHHHHHHHHHHTT-----CHHHHHHHHHSCTTTHHHHHSHHH---
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhcc-CCCCHHHHHHHcC-----CHHHHHHHHhCCCCccccccCCCC---
Confidence 477888888888888888877643110 1112 3567888888777 58888888877431 222222
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhCCCCC
Q 044439 80 DTPLQVAAKFGHSDIVSVLIKEAKSAQ 106 (121)
Q Consensus 80 ~tpL~~a~~~g~~~~~~~Ll~~ga~~~ 106 (121)
.||||+|+..|+.+++++|+++|++++
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~~ 190 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTEA 190 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGGH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCccc
Confidence 788888888888888888888887643
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.58 E-value=4.3e-16 Score=103.82 Aligned_cols=89 Identities=11% Similarity=0.150 Sum_probs=72.5
Q ss_pred CHHHHHHHHcCChHHHHHHhhhhhh---HhhhhcCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhc--ccCCCCc
Q 044439 7 HPNLFKAAAAGNAEPFKKDIRRDEI---ESLLTAQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLK--VNAKGDT 81 (121)
Q Consensus 7 ~~~l~~a~~~g~~~~~~~ll~~~~~---~~~~~~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~--~~~~~~t 81 (121)
.+|||.|+..|+.++++.|++.+.. ...... . .||||+|+..| +.+++++|++. +..... .+..|.|
T Consensus 129 ~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~-~-~TpLh~Aa~~G-----~~eiv~~Ll~~-ga~~~~~~~d~~g~T 200 (376)
T 2aja_A 129 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE-N-YHAFRLAAENG-----HLHVLNRLCEL-APTEATAMIQAENYY 200 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHH-H-HHHHHHHHHTT-----CHHHHHHHHHS-CGGGHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCccccccCCC-C-CCHHHHHHHCC-----CHHHHHHHHHc-CCccchhccCCCCCC
Confidence 4699999999999999999988632 122222 2 89999999998 69999999998 545444 6778999
Q ss_pred HHHHHH-HhCCHHHHHHHHHhCC
Q 044439 82 PLQVAA-KFGHSDIVSVLIKEAK 103 (121)
Q Consensus 82 pL~~a~-~~g~~~~~~~Ll~~ga 103 (121)
|||+|+ ..|+.+++++|++.|+
T Consensus 201 pL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 201 AFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHHHHHSTTCCHHHHHHHTTSHH
T ss_pred HHHHHHHHCCCHHHHHHHHhCCC
Confidence 999999 9999999999998764
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.54 E-value=2.3e-14 Score=79.95 Aligned_cols=72 Identities=15% Similarity=0.225 Sum_probs=64.3
Q ss_pred CCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcC
Q 044439 38 QTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERG 115 (121)
Q Consensus 38 ~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~ 115 (121)
..|.|+||+|+..+ +.+++++|+.. +...+..+..|.||||+|+..|+.+++++|+++|++++..+..+.+.
T Consensus 22 ~~g~t~L~~A~~~g-----~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tp 93 (110)
T 2zgd_A 22 SDLGKKLLEAARAG-----QDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTA 93 (110)
T ss_dssp CCHHHHHHHHHHHT-----CHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CccchHHHHHHHcC-----CHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcH
Confidence 37899999999998 59999999998 66777889999999999999999999999999999998877766554
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.51 E-value=2.7e-14 Score=80.06 Aligned_cols=74 Identities=23% Similarity=0.342 Sum_probs=65.3
Q ss_pred cCCCCCHHHHHHhcCCCccccHHHHHHHHHhCChhhhcccCCCCcHHHHHHHhCCHHHHHHHHHhCCCCCCCCCCCCcCC
Q 044439 37 AQTKNTILHINITSRKRKNVSTKFIEEILEICPSLLLKVNAKGDTPLQVAAKFGHSDIVSVLIKEAKSAQHGNEEPERGL 116 (121)
Q Consensus 37 ~~~g~t~lh~a~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~tpL~~a~~~g~~~~~~~Ll~~ga~~~~~~~~~~~~~ 116 (121)
+..|.|+||+|+..+ +.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.|++++..+..+.+..
T Consensus 6 d~~g~t~L~~A~~~~-----~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl 79 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNG-----HAEEVKKLLSK-GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPE 79 (115)
T ss_dssp SCSSCCHHHHHHHHT-----CHHHHHHHTTT-TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTT
T ss_pred CCCCCCHHHHHHHcC-----CHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 348999999999998 59999999998 666778899999999999999999999999999999988777666554
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=83.64 E-value=0.96 Score=19.72 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=15.9
Q ss_pred HHHHHHHHcCChHHHHHHh
Q 044439 8 PNLFKAAAAGNAEPFKKDI 26 (121)
Q Consensus 8 ~~l~~a~~~g~~~~~~~ll 26 (121)
..+..|+..|+++.++.|-
T Consensus 15 QqiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHH
Confidence 4578899999999998773
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=27.83 E-value=1.5e+02 Score=20.49 Aligned_cols=27 Identities=26% Similarity=0.477 Sum_probs=23.5
Q ss_pred cCCCCcHHHHHHHhCCHHHHHHHHHhC
Q 044439 76 NAKGDTPLQVAAKFGHSDIVSVLIKEA 102 (121)
Q Consensus 76 ~~~~~tpL~~a~~~g~~~~~~~Ll~~g 102 (121)
...|.|-+|+|.++.+.++..+|+..+
T Consensus 66 f~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 66 FDVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp CCTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 557899999999999999999998743
Done!