Query 044448
Match_columns 308
No_of_seqs 254 out of 1578
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 05:20:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044448.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044448hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 6.5E-83 2.2E-87 596.7 30.8 290 4-308 55-361 (363)
2 3qj3_A Cathepsin L-like protei 100.0 3.8E-82 1.3E-86 587.7 28.9 288 8-308 15-330 (331)
3 1pci_A Procaricain; zymogen, h 100.0 1.2E-81 4.3E-86 582.5 28.3 292 5-308 12-320 (322)
4 3qt4_A Cathepsin-L-like midgut 100.0 4.9E-81 1.7E-85 579.2 25.9 283 9-308 21-328 (329)
5 1by8_A Protein (procathepsin K 100.0 1.1E-80 3.8E-85 574.6 27.7 286 9-308 5-313 (314)
6 2c0y_A Procathepsin S; proenzy 100.0 1E-80 3.6E-85 575.0 24.3 286 7-308 4-314 (315)
7 1cs8_A Human procathepsin L; p 100.0 5.7E-80 1.9E-84 570.3 26.2 282 9-308 6-315 (316)
8 2o6x_A Procathepsin L1, secret 100.0 3.5E-79 1.2E-83 563.7 24.5 278 13-308 3-305 (310)
9 1xkg_A DER P I, major mite fec 100.0 9E-77 3.1E-81 547.2 21.1 277 14-308 7-301 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 1.2E-68 4.1E-73 512.3 21.8 264 30-307 135-433 (441)
11 1cqd_A Protein (protease II); 100.0 9.6E-67 3.3E-71 459.7 21.6 210 91-308 2-216 (221)
12 1ppo_A Protease omega; hydrola 100.0 1.3E-66 4.3E-71 457.5 20.6 209 92-308 1-214 (216)
13 3p5u_A Actinidin; SAD, cystein 100.0 1E-66 3.5E-71 459.4 20.0 210 92-308 1-216 (220)
14 1yal_A Chymopapain; hydrolase, 100.0 2.5E-66 8.6E-71 456.2 20.8 209 92-308 1-214 (218)
15 1iwd_A Ervatamin B; cysteine p 100.0 2.8E-66 9.6E-71 454.9 20.7 208 92-308 1-213 (215)
16 3hhi_A Cathepsin B-like cystei 100.0 8.7E-67 3E-71 483.5 15.9 246 46-307 28-310 (325)
17 3kwz_A Cathepsin K; enzyme inh 100.0 5.3E-66 1.8E-70 453.3 20.1 207 92-308 1-214 (215)
18 1s4v_A Cysteine endopeptidase; 100.0 7.6E-66 2.6E-70 456.3 20.1 212 91-308 1-218 (229)
19 2fo5_A Cysteine proteinase EP- 100.0 1.2E-65 4E-70 462.6 19.1 212 91-308 3-223 (262)
20 3ovx_A Cathepsin S; hydrolase, 100.0 1.2E-65 4E-70 452.0 18.1 207 92-308 2-217 (218)
21 2cio_A Papain; hydrolase/inhib 100.0 6.1E-65 2.1E-69 445.5 22.1 205 92-308 1-210 (212)
22 3u8e_A Papain-like cysteine pr 100.0 1.7E-65 5.9E-70 452.1 17.9 208 92-308 1-218 (222)
23 3ioq_A CMS1MS2; caricaceae, cy 100.0 5.8E-65 2E-69 446.0 20.3 205 92-308 1-210 (213)
24 2xu3_A Cathepsin L1; hydrolase 100.0 5.9E-65 2E-69 448.1 19.7 209 92-308 1-219 (220)
25 3i06_A Cruzipain; autocatalyti 100.0 1.5E-64 5E-69 444.1 21.8 205 92-308 1-213 (215)
26 2bdz_A Mexicain; cysteine prot 100.0 1.4E-64 4.8E-69 443.8 21.5 205 92-308 1-210 (214)
27 8pch_A Cathepsin H; hydrolase, 100.0 3.3E-65 1.1E-69 449.8 17.3 206 92-308 1-217 (220)
28 2b1m_A SPE31; papain-like, sug 100.0 1E-64 3.5E-69 453.4 20.6 210 91-308 1-223 (246)
29 1o0e_A Ervatamin C; plant cyst 100.0 1.9E-64 6.4E-69 441.1 21.5 202 92-308 1-206 (208)
30 1m6d_A Cathepsin F, catsf; pap 100.0 7.5E-65 2.6E-69 445.6 18.4 205 92-308 1-212 (214)
31 3f75_A Toxopain-2, cathepsin L 100.0 5.8E-65 2E-69 449.4 16.5 212 91-308 6-223 (224)
32 3bwk_A Cysteine protease falci 100.0 3.2E-64 1.1E-68 449.6 18.9 211 91-308 19-241 (243)
33 2oul_A Falcipain 2; cysteine p 100.0 4.2E-64 1.4E-68 448.3 18.9 211 91-308 17-239 (241)
34 3f5v_A DER P 1 allergen; aller 100.0 4.2E-64 1.4E-68 443.3 15.8 205 91-308 9-221 (222)
35 3pbh_A Procathepsin B; thiol p 100.0 5E-63 1.7E-67 457.3 20.0 244 46-307 27-312 (317)
36 1deu_A Procathepsin X; cystein 100.0 3.5E-60 1.2E-64 430.9 18.0 209 90-308 34-274 (277)
37 3cbj_A Cathepsin B; cathepsin 100.0 1.2E-59 4.2E-64 425.4 16.8 209 91-308 6-256 (266)
38 3qsd_A Cathepsin B-like peptid 100.0 1.6E-59 5.6E-64 421.9 15.2 206 91-306 2-250 (254)
39 2wbf_X Serine-repeat antigen p 100.0 2.5E-54 8.7E-59 390.5 17.9 209 94-307 9-259 (265)
40 3ois_A Cysteine protease; alph 100.0 5.3E-53 1.8E-57 386.5 8.5 225 47-292 17-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 6.5E-41 2.2E-45 319.0 14.1 195 92-291 48-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 1.1E-39 3.8E-44 310.8 18.1 194 92-291 53-413 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 2.8E-34 9.5E-39 268.2 16.8 74 103-177 21-108 (383)
44 3f75_P Toxopain-2, cathepsin L 99.6 2.6E-15 8.9E-20 115.7 8.5 63 7-69 17-91 (106)
45 2l95_A Crammer, LP06209P; cyst 99.5 3.3E-14 1.1E-18 104.5 6.5 56 11-68 6-77 (80)
46 1pxv_A Cysteine protease; hydr 96.8 0.018 6.2E-07 47.3 11.7 127 109-291 26-162 (183)
47 1x9y_A Cysteine proteinase; ha 96.5 0.023 8E-07 51.5 11.4 128 108-291 201-338 (367)
48 1cv8_A Staphopain; cysteine pr 96.3 0.069 2.4E-06 43.7 12.0 118 109-277 17-144 (174)
49 3erv_A Putative C39-like pepti 90.1 0.72 2.5E-05 39.9 7.0 54 204-260 125-188 (236)
50 3bb7_A Interpain A; cysteine p 39.9 55 0.0019 29.3 6.4 59 212-290 239-298 (321)
51 2vwa_A Putative uncharacterize 34.5 6.7 0.00023 28.2 -0.5 31 32-62 20-50 (101)
52 4d8b_A Streptopain; papain fol 28.4 79 0.0027 27.4 5.3 52 212-290 172-226 (261)
53 1dki_A Pyrogenic exotoxin B zy 27.6 1.3E+02 0.0044 27.4 6.8 52 212-290 290-344 (371)
54 3lys_A Prophage PI2 protein 01 22.4 2E+02 0.007 20.0 7.3 56 8-64 5-61 (112)
55 2nqa_A Calpain 8; calpain, cal 20.7 44 0.0015 29.8 2.2 63 211-278 205-270 (326)
56 2r9f_A Calpain-1 catalytic sub 20.4 46 0.0016 30.0 2.2 63 211-278 210-275 (339)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=6.5e-83 Score=596.69 Aligned_cols=290 Identities=39% Similarity=0.743 Sum_probs=253.9
Q ss_pred ccCChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH------------hcCCCCCCCCHHHHHhhhcCCCCCCC
Q 044448 4 TSHKTGNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF------------LRLNKFADLTREKFLASYTGYKPPPT 71 (308)
Q Consensus 4 ~~~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~------------~g~N~fsDlt~eEf~~~~~~~~~~~~ 71 (308)
.+..++.+.++|++||++|+|.|.+.+|+.+|++||++|+++ +|+|+|+|||.|||++++++..+...
T Consensus 55 dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~ 134 (363)
T 3tnx_A 55 DLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNY 134 (363)
T ss_dssp CSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHHHHHHHSCSSCSCC
T ss_pred hhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHHHHHHhcccccccc
Confidence 355567899999999999999999999999999999999998 89999999999999999987655332
Q ss_pred CCCCCCCCCccccCCCCCCCCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-C
Q 044448 72 DHPHSNRSNWFKNLNSSKMSFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-L 149 (308)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~ 149 (308)
......... . ......+||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +
T Consensus 135 ~~~~~~~~~-~--~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~~ 211 (363)
T 3tnx_A 135 TTTELSYEE-V--LNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRRS 211 (363)
T ss_dssp CCSSSSSSC-C--CCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTS
T ss_pred ccccccccc-c--cCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCCC
Confidence 211100011 1 1111236999999999999999999999 999999999999999999999999999999999999 8
Q ss_pred CCCCCCcHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEec
Q 044448 150 NGCAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDA 229 (308)
Q Consensus 150 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~ 229 (308)
.||+||++..|++|+.++ ||++|++|||.+ ..+.|. .........++.++..++..++..|+.+|++|||+|+|++
T Consensus 212 ~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~-~~~~c~--~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a 287 (363)
T 3tnx_A 212 YGCNGGYPWSALQLVAQY-GIHYRNTYPYEG-VQRYCR--SREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEA 287 (363)
T ss_dssp CTTBCCCHHHHHHHHHHT-CBCBTTTSCCCS-SCCCCC--GGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECC
T ss_pred CCCCCCChHHHHhHHHhc-CccccccCCCcC-cCCCcc--cCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEe
Confidence 899999999999999887 999999999999 888787 4434455677888888988899999999999999999997
Q ss_pred C--cccccCCceEeCCCCCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccc
Q 044448 230 T--WFNFYHGGVFTGPCGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAY 306 (308)
Q Consensus 230 ~--~f~~y~~Giy~~~c~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~y 306 (308)
. +|++|++|||..+|++.++|||+|||||+ +|||||||||++|||+|||||+|+.+. .|+|||++.|+|
T Consensus 288 ~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~--------~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~y 359 (363)
T 3tnx_A 288 AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP--------NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFY 359 (363)
T ss_dssp CSHHHHTEEEEEECCCCCSCCCEEEEEEEEET--------TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEE
T ss_pred cchhhhCCCCCEECCCCCCCCCeEEEEEEcCC--------CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeee
Confidence 6 89999999999999888999999999975 499999999999999999999999865 578999999999
Q ss_pred cC
Q 044448 307 PL 308 (308)
Q Consensus 307 p~ 308 (308)
|+
T Consensus 360 Pi 361 (363)
T 3tnx_A 360 PV 361 (363)
T ss_dssp EE
T ss_pred cc
Confidence 96
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=3.8e-82 Score=587.71 Aligned_cols=288 Identities=37% Similarity=0.658 Sum_probs=255.3
Q ss_pred hhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH----------------hcCCCCCCCCHHHHHhhhcCCCCCCC
Q 044448 8 TGNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF----------------LRLNKFADLTREKFLASYTGYKPPPT 71 (308)
Q Consensus 8 ~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~----------------~g~N~fsDlt~eEf~~~~~~~~~~~~ 71 (308)
|..++.+|++||++|+|.|.+.+|+.+|++||++|+++ ||+|+|+|||.|||++++++.+++..
T Consensus 15 ~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~~ 94 (331)
T 3qj3_A 15 STFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPAD 94 (331)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCSS
T ss_pred CHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccccc
Confidence 47789999999999999999988999999999999987 79999999999999999887665322
Q ss_pred CCCCCCCCCccccCC----CCCCCCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCC--cccCCHHHHh
Q 044448 72 DHPHSNRSNWFKNLN----SSKMSFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQ--LVTRSKHQLV 144 (308)
Q Consensus 72 ~~~~~~~~~~~~~~~----~~~~~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~--~~~lS~q~l~ 144 (308)
..... .. +.... ....+||++||||++|+||||||||. |||||||++++||++++|+++. ++.||+|+|+
T Consensus 95 ~~~~~--~~-~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~Lv 171 (331)
T 3qj3_A 95 LHKNG--IP-IKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLV 171 (331)
T ss_dssp TTTTC--EE-ECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHH
T ss_pred ccccC--cc-cccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHh
Confidence 11100 11 21110 01126999999999999999999999 9999999999999999999998 8999999999
Q ss_pred hcCC-CCCCCCCcHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc-CC
Q 044448 145 DCST-LNGCAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR-QP 222 (308)
Q Consensus 145 dc~~-~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gP 222 (308)
||+. +.||+||++..|++|+.+++||++|++|||.+ ..+.|. .. .....++|.+|..++..++++||++|++ ||
T Consensus 172 dC~~~~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~GP 247 (331)
T 3qj3_A 172 DCVPNALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEM-ADGNCH--YD-PNQVAARLSGYVYLSGPDENMLADMVATKGP 247 (331)
T ss_dssp HHCTTSCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCS-SCCCCC--CC-TTSEEECCSEEEEESSCCHHHHHHHHHHHCC
T ss_pred hhccCCCCCCCCCHHHHHHHHHHcCCcCcccccCccC-CCCCCC--CC-cccceeEeeEEEEeCCCCHHHHHHHHHhCCC
Confidence 9998 89999999999999999888999999999999 899999 65 5566788999999997899999999995 99
Q ss_pred eEEEEecC-cccccCCceEeCC-CC-CCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCcc
Q 044448 223 VSVAIDAT-WFNFYHGGVFTGP-CG-NTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCN 299 (308)
Q Consensus 223 V~v~i~~~-~f~~y~~Giy~~~-c~-~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cg 299 (308)
|+|+|++. +|++|++|||..+ |+ ..++|||+|||||++ + |++|||||||||++|||+|||||+|+.+ |.||
T Consensus 248 V~v~i~a~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~Cg 321 (331)
T 3qj3_A 248 VAVAFDADDPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE---N-GQDYWLVKNSWGDGWGLDGYFKIARNAN--NHCG 321 (331)
T ss_dssp EEEEECCCTTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSSS--SGGG
T ss_pred EEEEEEcccccccccCceEeCCCCCCCcCCEEEEEEEEecc---C-CceEEEEEcCCCCCcCCCCEEEEEcCCC--CccC
Confidence 99999999 8999999999987 86 569999999999987 5 8999999999999999999999999974 7899
Q ss_pred ccccccccC
Q 044448 300 IAANAAYPL 308 (308)
Q Consensus 300 i~~~~~yp~ 308 (308)
|++.++||+
T Consensus 322 I~~~~~~p~ 330 (331)
T 3qj3_A 322 IAGVASVPT 330 (331)
T ss_dssp TTTSCEEEE
T ss_pred cCCceeeee
Confidence 999999995
No 3
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=1.2e-81 Score=582.55 Aligned_cols=292 Identities=39% Similarity=0.750 Sum_probs=255.4
Q ss_pred cCChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH------------hcCCCCCCCCHHHHHhhhcCCCCCCCC
Q 044448 5 SHKTGNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF------------LRLNKFADLTREKFLASYTGYKPPPTD 72 (308)
Q Consensus 5 ~~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~------------~g~N~fsDlt~eEf~~~~~~~~~~~~~ 72 (308)
+..+.++..+|++||++|+|.|.+.+|+.+|+.||++|+++ +|+|+|+|||.+||++++++.++....
T Consensus 12 ~~~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 91 (322)
T 1pci_A 12 LTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATI 91 (322)
T ss_dssp CTHHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSCTTTTSCHHHHHHHHCCCBCCCSS
T ss_pred ccchHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCceEEecCccccCCHHHHHHHhcCCCCcccc
Confidence 33446788899999999999999988999999999999998 899999999999999988876542211
Q ss_pred CCCCCCCCccccCCCCCCCCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CC
Q 044448 73 HPHSNRSNWFKNLNSSKMSFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LN 150 (308)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~ 150 (308)
..... .. +..... .+||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.
T Consensus 92 ~~~~~-~~-~~~~~~--~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~~~~ 167 (322)
T 1pci_A 92 EQSYD-EE-FINEDI--VNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSH 167 (322)
T ss_dssp CCCCS-EE-CCCCCC--CCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCTTSC
T ss_pred ccccc-cc-cccccc--cCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcCCCC
Confidence 10000 11 211111 25999999999999999999999 999999999999999999999999999999999997 88
Q ss_pred CCCCCcHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC
Q 044448 151 GCAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT 230 (308)
Q Consensus 151 gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~ 230 (308)
||+||++..|++|+.++ ||++|++|||.+ ..+.|+ ........++|.+|..|+..++++|+++|++|||+|+|+++
T Consensus 168 gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~-~~~~C~--~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~ 243 (322)
T 1pci_A 168 GCKGGYPPYALEYVAKN-GIHLRSKYPYKA-KQGTCR--AKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESK 243 (322)
T ss_dssp GGGCBCHHHHHHHHHHH-CBCBTTTSCCCS-SCCCCT--TTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTT
T ss_pred CCCCCCHHHHHHHHHHh-CCCchhhCCCCC-CCCCCC--CCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEecc
Confidence 99999999999999998 899999999999 889999 54233456789999999877899999999999999999996
Q ss_pred --cccccCCceEeCCCCCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCcccccccccc
Q 044448 231 --WFNFYHGGVFTGPCGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYP 307 (308)
Q Consensus 231 --~f~~y~~Giy~~~c~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp 307 (308)
+|++|++|||..+|++.++|||+|||||++ + |++|||||||||++|||+|||||+|+.+. .|.|||++.++||
T Consensus 244 ~~~f~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp 319 (322)
T 1pci_A 244 GRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKS---G-GKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYP 319 (322)
T ss_dssp CHHHHTEEEEEECCSCCSCCCEEEEEEEEEEE---T-TEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEE
T ss_pred cccccccCCeEeCCCCCCCCCEEEEEEEEecc---C-CccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEE
Confidence 899999999988898889999999999998 5 89999999999999999999999999632 3889999999999
Q ss_pred C
Q 044448 308 L 308 (308)
Q Consensus 308 ~ 308 (308)
+
T Consensus 320 ~ 320 (322)
T 1pci_A 320 T 320 (322)
T ss_dssp C
T ss_pred E
Confidence 6
No 4
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=4.9e-81 Score=579.15 Aligned_cols=283 Identities=36% Similarity=0.700 Sum_probs=249.5
Q ss_pred hHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH----------------hcCCCCCCCCHHHHHhhhcCCCCCCCC
Q 044448 9 GNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF----------------LRLNKFADLTREKFLASYTGYKPPPTD 72 (308)
Q Consensus 9 ~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~----------------~g~N~fsDlt~eEf~~~~~~~~~~~~~ 72 (308)
..+..+|++||++|+|.|.+.+|+.+|+.||++|+++ ||+|+|+|||.|||++ +++.+++...
T Consensus 21 ~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~~~~ 99 (329)
T 3qt4_A 21 SLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKAQKP 99 (329)
T ss_dssp CHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCCC--
T ss_pred HHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCcccccc
Confidence 6788999999999999999988999999999999987 7999999999999999 7765532111
Q ss_pred CCCC-CCCCccccCCCCCCCCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC--
Q 044448 73 HPHS-NRSNWFKNLNSSKMSFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-- 148 (308)
Q Consensus 73 ~~~~-~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-- 148 (308)
.... .... +.... .+||++||||++ +||||||||. |||||||++++||++++++++.++.||+|+|+||+.
T Consensus 100 ~~~~~~~~~-~~~~~---~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~ 174 (329)
T 3qt4_A 100 KHPENLRMP-YVSSK---KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSY 174 (329)
T ss_dssp ----CCEEE-CCCCC---SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGG
T ss_pred ccccccccc-ccCCc---cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhcccc
Confidence 1000 0011 22222 269999999999 9999999999 999999999999999999999999999999999997
Q ss_pred -CCCCCCCcHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc-CCeEEE
Q 044448 149 -LNGCAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR-QPVSVA 226 (308)
Q Consensus 149 -~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gPV~v~ 226 (308)
+.||+||++..|++|+.++ ||++|++|||.+ ..+.|. .. .....++|++|..++..++++||++|++ |||+|+
T Consensus 175 g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~ 249 (329)
T 3qt4_A 175 GNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEA-QGDYCR--FD-SSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVA 249 (329)
T ss_dssp TCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCS-SCCCCC--CC-GGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCCCChhHHHHHHHHc-CCCcHHHeeeec-CCCCCC--CC-cccceEEeceEEEecCCCHHHHHHHHHhCCCEEEE
Confidence 7799999999999999999 999999999999 889999 55 4456678999999998899999999995 999999
Q ss_pred EecC-cccccCCceEeCC-CC-CCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCcccccc
Q 044448 227 IDAT-WFNFYHGGVFTGP-CG-NTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAAN 303 (308)
Q Consensus 227 i~~~-~f~~y~~Giy~~~-c~-~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~ 303 (308)
|++. +|++|++|||..+ |. ..++|||+|||||++ + |++|||||||||++||++|||||+|+.+ |+|||++.
T Consensus 250 i~a~~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~CgI~~~ 323 (329)
T 3qt4_A 250 IDATDELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD---N-GQDYWILKNSWGSGWGESGYWRQVRNYG--NNCGIATA 323 (329)
T ss_dssp ECCCGGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEESSSS--SGGGTTTT
T ss_pred EecChhhhhccCceeecCCCCCCcCCEEEEEEEEEee---C-CccEEEEEeCCCCcccCCcEEEEEeCCC--CccCCCCc
Confidence 9999 9999999999986 86 579999999999987 5 8999999999999999999999999974 78999999
Q ss_pred ccccC
Q 044448 304 AAYPL 308 (308)
Q Consensus 304 ~~yp~ 308 (308)
++||+
T Consensus 324 ~~yp~ 328 (329)
T 3qt4_A 324 ASYPA 328 (329)
T ss_dssp CEEEE
T ss_pred eeEee
Confidence 99995
No 5
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.1e-80 Score=574.64 Aligned_cols=286 Identities=36% Similarity=0.684 Sum_probs=251.3
Q ss_pred hHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH----------------hcCCCCCCCCHHHHHhhhcCCCCCCCC
Q 044448 9 GNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF----------------LRLNKFADLTREKFLASYTGYKPPPTD 72 (308)
Q Consensus 9 ~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~----------------~g~N~fsDlt~eEf~~~~~~~~~~~~~ 72 (308)
.++..+|++||++|+|.|.+.+|+.+|+.||++|+++ +|+|+|+|||.+||++++++.+++...
T Consensus 5 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 84 (314)
T 1by8_A 5 EILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSH 84 (314)
T ss_dssp CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCccc
Confidence 4678899999999999999988999999999999987 799999999999999988876543221
Q ss_pred CCCCCCCCccccCCCCCCCCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CC
Q 044448 73 HPHSNRSNWFKNLNSSKMSFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LN 150 (308)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~ 150 (308)
.. .. .. +... .....||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.
T Consensus 85 ~~-~~-~~-~~~~-~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~ 160 (314)
T 1by8_A 85 SR-SN-DT-LYIP-EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 160 (314)
T ss_dssp CC-SS-SS-SBCC-CCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCTTSC
T ss_pred cc-CC-cc-cccc-ccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCC
Confidence 10 00 11 2211 11113999999999999999999999 999999999999999999999999999999999997 89
Q ss_pred CCCCCcHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc-CCeEEEEec
Q 044448 151 GCAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR-QPVSVAIDA 229 (308)
Q Consensus 151 gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gPV~v~i~~ 229 (308)
||+||++..|++|+.++.||++|++|||.+ ..+.|. .. .....++|.+|..|+..++++||++|++ |||+|+|++
T Consensus 161 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~ 236 (314)
T 1by8_A 161 GCGGGYMTNAFQYVQKNRGIDSEDAYPYVG-QEESCM--YN-PTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDA 236 (314)
T ss_dssp GGGCCCSHHHHHHHHHTTCBCBTTTSCCCS-SCCCCC--CC-GGGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECC
T ss_pred CCcCCCHHHHHHHHHHcCCcCcHhhCCCCC-CCCCcC--CC-CccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEe
Confidence 999999999999998666999999999999 889998 54 3345678999999987799999999995 999999999
Q ss_pred C--cccccCCceEeCC-CCC-CCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCcccccccc
Q 044448 230 T--WFNFYHGGVFTGP-CGN-TPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAA 305 (308)
Q Consensus 230 ~--~f~~y~~Giy~~~-c~~-~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~ 305 (308)
. +|++|++|||..+ |+. .++|||+|||||++ + |++|||||||||++|||+|||||+|+.+ |+|||++.++
T Consensus 237 ~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~CgI~~~~~ 310 (314)
T 1by8_A 237 SLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ---K-GNKHWIIKNSWGENWGNKGYILMARNKN--NACGIANLAS 310 (314)
T ss_dssp CSHHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEE---T-TEEEEEEECSBTTTSTBTTEEEECCSSS--CGGGTTSSCE
T ss_pred ChHHhhhccCceecCCCCCCCCCCeEEEEEEEecc---C-CceEEEEEcCCCCCcCcCCEEEEEcCCC--CcCCccCeeE
Confidence 8 8999999999988 986 69999999999987 5 8999999999999999999999999863 7899999999
Q ss_pred ccC
Q 044448 306 YPL 308 (308)
Q Consensus 306 yp~ 308 (308)
||+
T Consensus 311 ~p~ 313 (314)
T 1by8_A 311 FPK 313 (314)
T ss_dssp EEC
T ss_pred Eee
Confidence 996
No 6
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1e-80 Score=575.03 Aligned_cols=286 Identities=36% Similarity=0.687 Sum_probs=250.6
Q ss_pred ChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH----------------hcCCCCCCCCHHHHHhhhcCCCCCC
Q 044448 7 KTGNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF----------------LRLNKFADLTREKFLASYTGYKPPP 70 (308)
Q Consensus 7 ~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~----------------~g~N~fsDlt~eEf~~~~~~~~~~~ 70 (308)
.+..+..+|++||++|+|.|.+.+|+.+|+.||++|+++ +|+|+|+|||.+||++++++.+++.
T Consensus 4 ~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~ 83 (315)
T 2c0y_A 4 KDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPS 83 (315)
T ss_dssp CCGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCc
Confidence 335788999999999999999888999999999999987 7999999999999998888765422
Q ss_pred CCCCCCCCCCccccCCCCCCCCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcC-C
Q 044448 71 TDHPHSNRSNWFKNLNSSKMSFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCS-T 148 (308)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~-~ 148 (308)
.... . .. +... . ..+||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+ .
T Consensus 84 ~~~~--~-~~-~~~~-~-~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~ 157 (315)
T 2c0y_A 84 QWQR--N-IT-YKSN-P-NRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTE 157 (315)
T ss_dssp GGGS--C-BC-C--------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCG
T ss_pred cccC--C-cc-ccCc-c-cCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhccc
Confidence 1100 0 11 2211 1 125999999999999999999999 99999999999999999999999999999999998 3
Q ss_pred ---CCCCCCCcHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc-CCeE
Q 044448 149 ---LNGCAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR-QPVS 224 (308)
Q Consensus 149 ---~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gPV~ 224 (308)
+.||+||++..|++|+.++.||++|++|||.+ ..+.|+ .. .....++|++|..|+..++++||++|++ |||+
T Consensus 158 ~~~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~ 233 (315)
T 2c0y_A 158 KYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKA-MDQKCQ--YD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVS 233 (315)
T ss_dssp GGTCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCS-SCCCCC--CC-GGGEEECCCEEEECCTTCHHHHHHHHHHTCCEE
T ss_pred ccCCCCCCCCCHHHHHHHHHHhCCcCchhcCCCcc-CCCCcc--cC-CcccccccCCeEEeCCCCHHHHHHHHHHcCCEE
Confidence 88999999999999998656999999999999 889999 54 3345678999999987799999999995 9999
Q ss_pred EEEecC--cccccCCceEeCC-CCCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCcccc
Q 044448 225 VAIDAT--WFNFYHGGVFTGP-CGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIA 301 (308)
Q Consensus 225 v~i~~~--~f~~y~~Giy~~~-c~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~ 301 (308)
|+|++. +|++|++|||..+ |++.++|||+|||||++ + |++|||||||||++||++|||||+|+.+ |+|||+
T Consensus 234 v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~CgI~ 307 (315)
T 2c0y_A 234 VGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL---N-GKEYWLVKNSWGHNFGEEGYIRMARNKG--NHCGIA 307 (315)
T ss_dssp EEECCCSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSSS--SGGGTT
T ss_pred EEEecCchhhhccCCCcccCCCCCCcCCEEEEEEEEeec---C-CCcEEEEEcCCCCCcCCCcEEEEEcCCC--CccCcC
Confidence 999998 8999999999988 98889999999999987 5 8999999999999999999999999863 789999
Q ss_pred ccccccC
Q 044448 302 ANAAYPL 308 (308)
Q Consensus 302 ~~~~yp~ 308 (308)
+.++||+
T Consensus 308 ~~~~~p~ 314 (315)
T 2c0y_A 308 SFPSYPE 314 (315)
T ss_dssp TSCEEEE
T ss_pred ceeEEee
Confidence 9999995
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=5.7e-80 Score=570.35 Aligned_cols=282 Identities=35% Similarity=0.689 Sum_probs=247.7
Q ss_pred hHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH----------------hcCCCCCCCCHHHHHhhhcCCCCCCCC
Q 044448 9 GNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF----------------LRLNKFADLTREKFLASYTGYKPPPTD 72 (308)
Q Consensus 9 ~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~----------------~g~N~fsDlt~eEf~~~~~~~~~~~~~ 72 (308)
..+..+|++||++|+|.| +.+|+.+|+.||++|+++ +|+|+|+|||.+||++++++.++....
T Consensus 6 ~~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~ 84 (316)
T 1cs8_A 6 HSLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR 84 (316)
T ss_dssp GGGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS
T ss_pred HHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc
Confidence 457889999999999999 778999999999999987 799999999999999888876542211
Q ss_pred CCCCCCCCccccCCCCCCCCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC---
Q 044448 73 HPHSNRSNWFKNLNSSKMSFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST--- 148 (308)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~--- 148 (308)
.. .. +... . ..+||++||||++|+|+||||||. |||||||++++||++++|++++++.||+|+|+||+.
T Consensus 85 ~~----~~-~~~~-~-~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g 157 (316)
T 1cs8_A 85 KG----KV-FQEP-L-FYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG 157 (316)
T ss_dssp CC----EE-CCCC-T-TCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGT
T ss_pred cC----cc-ccCc-c-ccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccC
Confidence 10 11 2211 1 125999999999999999999999 999999999999999999999999999999999986
Q ss_pred CCCCCCCcHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc-CCeEEEE
Q 044448 149 LNGCAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR-QPVSVAI 227 (308)
Q Consensus 149 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gPV~v~i 227 (308)
+.||+||++..|++|+.++.||++|++|||.+ ..+.|. .. .....++|.+|..|+. ++++||++|++ |||+|+|
T Consensus 158 ~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i 232 (316)
T 1cs8_A 158 NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEA-TEESCK--YN-PKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAI 232 (316)
T ss_dssp CCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCS-SCCCCC--CC-GGGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHhCCcCchhccCCCC-CCCCcC--CC-CccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEE
Confidence 78999999999999997556999999999999 889999 54 3445678999999986 89999999995 9999999
Q ss_pred ecC--cccccCCceEeCC-CCC-CCCeEEEEEEeC---CcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccc
Q 044448 228 DAT--WFNFYHGGVFTGP-CGN-TPNHGVTIVGYG---TTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNI 300 (308)
Q Consensus 228 ~~~--~f~~y~~Giy~~~-c~~-~~~Hav~iVGyg---~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi 300 (308)
++. +|++|++|||..+ |+. .++|||+||||| ++. + |++|||||||||++|||+|||||+|+.+ |+|||
T Consensus 233 ~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~--~-g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~CgI 307 (316)
T 1cs8_A 233 DAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTES--D-NNKYWLVKNSWGEEWGMGGYVKMAKDRR--NHCGI 307 (316)
T ss_dssp CCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSS--C-CEEEEEEECSBCTTSTBTTEEEEECSSS--SGGGT
T ss_pred ecCChhhccccCceECCCCCCCCCCCEEEEEEEecCCcccC--C-CCcEEEEEcCCCCCcccCCEEEEECCCC--CccCc
Confidence 997 7999999999987 986 699999999999 542 5 8899999999999999999999999963 78999
Q ss_pred cccccccC
Q 044448 301 AANAAYPL 308 (308)
Q Consensus 301 ~~~~~yp~ 308 (308)
++.++||+
T Consensus 308 ~~~~~~p~ 315 (316)
T 1cs8_A 308 ASAASYPT 315 (316)
T ss_dssp TTSCEEEC
T ss_pred cceeeEee
Confidence 99999996
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=3.5e-79 Score=563.70 Aligned_cols=278 Identities=35% Similarity=0.665 Sum_probs=243.5
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH----------------hcCCCCCCCCHHHHHhhhcC-CCCCCCCCCC
Q 044448 13 AKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF----------------LRLNKFADLTREKFLASYTG-YKPPPTDHPH 75 (308)
Q Consensus 13 ~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~----------------~g~N~fsDlt~eEf~~~~~~-~~~~~~~~~~ 75 (308)
.+|++||++|+|.|.+.+|+.+| .||++|+++ +|+|+|+|||.+||++++++ .+.+......
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 81 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSH 81 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccccc
Confidence 58999999999999988899999 999999987 78999999999999988877 4432111100
Q ss_pred CCCCCccccCCCCCCCCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC---CCC
Q 044448 76 SNRSNWFKNLNSSKMSFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST---LNG 151 (308)
Q Consensus 76 ~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~---~~g 151 (308)
. .. +..... +||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.|
T Consensus 82 -~-~~-~~~~~~---~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~g 155 (310)
T 2o6x_A 82 -G-VP-YEANNR---AVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNG 155 (310)
T ss_dssp -S-EE-CCC-------CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCG
T ss_pred -C-Cc-cccccC---CCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCC
Confidence 0 11 211112 5999999999999999999999 999999999999999999999999999999999985 789
Q ss_pred CCCCcHHHHHHHHHHcCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc-CCeEEEEecC
Q 044448 152 CAKNFLENAFEYIRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR-QPVSVAIDAT 230 (308)
Q Consensus 152 C~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gPV~v~i~~~ 230 (308)
|+||++..|++|+.. .||++|++|||.+ ..+.|. .+ .....++|.+|..|+..++++||++|++ |||+|+|++.
T Consensus 156 C~GG~~~~a~~yi~~-~Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~ 230 (310)
T 2o6x_A 156 CGGGLMENAYQYLKQ-FGLETESSYPYTA-VEGQCR--YN-KQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE 230 (310)
T ss_dssp GGCCCHHHHHHHHTT-SCBCBTTTSCCCS-SCCCCC--CC-GGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC
T ss_pred CCCCCHHHHHHHHHH-CCcCchhcCCCCC-CCCCcc--CC-CCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc
Confidence 999999999999984 5999999999999 889999 54 3445789999999987799999999995 9999999999
Q ss_pred -cccccCCceEeCC-CCC-CCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCcccccccccc
Q 044448 231 -WFNFYHGGVFTGP-CGN-TPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYP 307 (308)
Q Consensus 231 -~f~~y~~Giy~~~-c~~-~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp 307 (308)
+|++|++|||..+ |+. .++|||+|||||++ + |++|||||||||++|||+|||||+|+.+ |+|||++.++||
T Consensus 231 ~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~GY~~i~r~~~--n~Cgi~~~~~~p 304 (310)
T 2o6x_A 231 SDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQ---G-GTDYWIVKNSWGLSWGERGYIRMVRNRG--NMCGIASLASLP 304 (310)
T ss_dssp HHHHTEEEEEECCSSCCTTCCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSSS--SGGGTTTSEEEE
T ss_pred hhhhhCCCceecCCCCCCCCCCEEEEEEEEecc---C-CceEEEEEeCCCCccCCCcEEEEEcCCC--CcCCccceeeEE
Confidence 9999999999876 874 68999999999998 5 8999999999999999999999999964 789999999999
Q ss_pred C
Q 044448 308 L 308 (308)
Q Consensus 308 ~ 308 (308)
+
T Consensus 305 ~ 305 (310)
T 2o6x_A 305 M 305 (310)
T ss_dssp E
T ss_pred E
Confidence 5
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=9e-77 Score=547.20 Aligned_cols=277 Identities=23% Similarity=0.450 Sum_probs=239.7
Q ss_pred HHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHh-----cCCCCCCCCHHHHHhhhcCCCCCCCCCCCCCCCCccccC---
Q 044448 14 KHEQWMVEFARTYKDQAEKEMRFKIFKKNHEFL-----RLNKFADLTREKFLASYTGYKPPPTDHPHSNRSNWFKNL--- 85 (308)
Q Consensus 14 ~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~~-----g~N~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~--- 85 (308)
+|++||++|+|.|.+.+|+.+|+.||++|+++. |+|+|+|||.|||++++++.+........ . .. +...
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~N~~g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~-~-~~-~~~~~~~ 83 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQSNGGAINHLSDLSLDEFKNRFLMSAEAFEHLKT-Q-FD-LNAETNA 83 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHCCCCCTTTTSCHHHHHHHHSBCHHHHHHHHH-H-HC------CB
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCHHHHHHHhcCCCCccccccC-C-cc-ccccccc
Confidence 599999999999999889999999999999993 99999999999999977663211100000 0 00 1100
Q ss_pred -CCCCCCCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCCCCCCCCCcHHHHHHH
Q 044448 86 -NSSKMSFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCSTLNGCAKNFLENAFEY 163 (308)
Q Consensus 86 -~~~~~~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~ 163 (308)
... .+||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+...||+||++..|++|
T Consensus 84 ~~~~-~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~GC~GG~~~~a~~y 162 (312)
T 1xkg_A 84 CSIN-GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCASQHGCHGDTIPRGIEY 162 (312)
T ss_dssp CCCC-SCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTCSSTTBCCCHHHHHHH
T ss_pred cccc-ccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccCCCCCCCCCHHHHHHH
Confidence 001 25999999999999999999999 999999999999999999999999999999999993289999999999999
Q ss_pred HHHcCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc--CCeEEEEecC---cccccCCc
Q 044448 164 IRQYQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR--QPVSVAIDAT---WFNFYHGG 238 (308)
Q Consensus 164 ~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~--gPV~v~i~~~---~f~~y~~G 238 (308)
+.+. ||++|++|||.+ ..+.|+ . .....++|++|..|+..++++||++|++ |||+|+|+++ +|++|++|
T Consensus 163 i~~~-Gi~~e~~yPY~~-~~~~C~--~--~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~~G 236 (312)
T 1xkg_A 163 IQHN-GVVQESYYRYVA-REQSCR--R--PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGR 236 (312)
T ss_dssp HHHH-CEEBGGGSCCCS-SCCCCC--C--CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSS
T ss_pred HHHc-CCCccccCCccC-CCCCCC--C--CCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccCCc
Confidence 9986 999999999999 889998 3 2345788999999987799999999985 9999999998 59999999
Q ss_pred eEeCC-CC-C-CCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 239 VFTGP-CG-N-TPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 239 iy~~~-c~-~-~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
||..+ |+ . . +|||+|||||++ + |++|||||||||++|||+|||||+|+. |.|||++.++||+
T Consensus 237 Vy~~~~c~~~~~-~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~GY~~i~r~~---n~CgI~~~~~~~~ 301 (312)
T 1xkg_A 237 TIIQRDNGYQPN-YHAVNIVGYSNA---Q-GVDYWIVRNSWDTNWGDNGYGYFAANI---DLMMIEEYPYVVI 301 (312)
T ss_dssp SCBCCCCSSCCE-EEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTTCCEEEE
T ss_pred EEcCCCCCCCcC-ceEEEEEEEecc---C-CceEEEEEeCCCCcccCCcEEEEEcCC---CcccccceeEEee
Confidence 99986 87 4 6 999999999987 5 899999999999999999999999994 8899999999985
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.2e-68 Score=512.32 Aligned_cols=264 Identities=27% Similarity=0.487 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHHHH------------hc-CCCCCCCCHHHHHhhhcCCCCCCCC-CCCCCCCCccccCCCCCCCCCce
Q 044448 30 AEKEMRFKIFKKNHEF------------LR-LNKFADLTREKFLASYTGYKPPPTD-HPHSNRSNWFKNLNSSKMSFYDS 95 (308)
Q Consensus 30 ~e~~~R~~iF~~N~~~------------~g-~N~fsDlt~eEf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lP~~ 95 (308)
.++.+|++||++|+++ ++ +|+|+|||.+||++++++.+++... .+... .. ..... ..+||++
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~-~~-~~~~~--~~~lP~s 210 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPL-TA-EIQQK--ILFLPTS 210 (441)
T ss_dssp ---------------------------------------------------------------------------CCCSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCCceEeecccccccCCHHHHHHHhCCCcccccccccCcc-cc-ccccc--cccCCCC
Confidence 4678999999999988 66 8999999999999988775432211 10000 00 10111 1269999
Q ss_pred eecCCCC---CCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcc--cCCHHHHhhcCC-CCCCCCCcHHHH-HHHHHHc
Q 044448 96 IDWNERG---AVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLV--TRSKHQLVDCST-LNGCAKNFLENA-FEYIRQY 167 (308)
Q Consensus 96 ~Dwr~~g---~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~--~lS~q~l~dc~~-~~gC~GG~~~~a-~~~~~~~ 167 (308)
||||+++ +|+||||||. |||||||++++||++++|+++.++ .||+|+|+||+. +.||+||++..+ ++|+.++
T Consensus 211 ~DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~~~GC~GG~~~~aa~~yi~~~ 290 (441)
T 3pdf_A 211 WDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDF 290 (441)
T ss_dssp EETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTTSCTTBCCCHHHHTTHHHHHT
T ss_pred EECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccCCCCCCCCchhHHHHHHHHhc
Confidence 9999964 8999999999 999999999999999999998764 499999999998 899999999987 8999887
Q ss_pred CCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCC----CCHHHHHHHHh-cCCeEEEEecC-cccccCCceEe
Q 044448 168 QRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQP----ATEEGLQDVVS-RQPVSVAIDAT-WFNFYHGGVFT 241 (308)
Q Consensus 168 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~----~~~~~lk~~l~-~gPV~v~i~~~-~f~~y~~Giy~ 241 (308)
||++|++|||.+ ..+.|. .. .....+.+.+|..++. .++++|+++|+ +|||+|+|++. +|++|++|||.
T Consensus 291 -Gi~tE~~yPY~~-~~~~C~--~~-~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~~~F~~Y~sGVy~ 365 (441)
T 3pdf_A 291 -GLVEEACFPYTG-TDSPCK--MK-EDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYH 365 (441)
T ss_dssp -CBCBGGGSCCCS-SCCCSC--CC-SSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCCGGGGGCCSSEEC
T ss_pred -CCCcHHHeeecc-cCCCCC--Cc-cccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEecccccccCCceEe
Confidence 999999999999 999999 54 4455677888988863 58999999988 59999999999 99999999998
Q ss_pred CC-CC------CCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCcccccccccc
Q 044448 242 GP-CG------NTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYP 307 (308)
Q Consensus 242 ~~-c~------~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp 307 (308)
.+ |. ..++|||+|||||++. .+ |++|||||||||++|||+|||||+|+. |.|||+++++++
T Consensus 366 ~~~~~~~~~~~~~~~HaV~iVGyG~~~-~~-G~~YWIVkNSWG~~WGe~GYfri~rg~---n~CGI~s~~~a~ 433 (441)
T 3pdf_A 366 HTGLRDPFNPFELTNHAVLLVGYGTDS-AS-GMDYWIVKNSWGTGWGENGYFRIRRGT---DECAIESIAVAA 433 (441)
T ss_dssp CC---CCCCCCCCCCEEEEEEEEEECT-TT-CCEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTSCCEEE
T ss_pred cCCCCcccCCCCcCCeEEEEEEecccC-CC-CceEEEEEcCCCCCcCCCeEEEEEcCC---CccCCCCceEEe
Confidence 76 32 2489999999999852 15 889999999999999999999999997 789999998753
No 11
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=9.6e-67 Score=459.73 Aligned_cols=210 Identities=46% Similarity=0.896 Sum_probs=195.4
Q ss_pred CCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcC
Q 044448 91 SFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQ 168 (308)
Q Consensus 91 ~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~ 168 (308)
+||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.+++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~ 81 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNG 81 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCCCCCCCCCCHHHHHHHHHHhC
Confidence 5999999999999999999999 999999999999999999999999999999999998 88999999999999999877
Q ss_pred CCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeCCCCC
Q 044448 169 RLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTGPCGN 246 (308)
Q Consensus 169 Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~~c~~ 246 (308)
||++|++|||.+ ..+.|+ .. .....++|.+|..++..++++||++|++|||+|+|++. +|++|++|||+.+|++
T Consensus 82 Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~ 157 (221)
T 1cqd_A 82 GINSEETYPYRG-QDGICN--ST-VNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNI 157 (221)
T ss_dssp SBCBTTTSCCCS-SCCCCC--SS-SCCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCC
T ss_pred CccccccCCccC-CCCCcC--CC-CCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCC
Confidence 999999999999 889999 55 34567889999999877899999999999999999997 8999999999988988
Q ss_pred CCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 247 TPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 247 ~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
.++|||+|||||++ + |++|||||||||++|||+|||||+|+.+. .|+|||+++++||+
T Consensus 158 ~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~ 216 (221)
T 1cqd_A 158 SANHALTVVGYGTE---N-DKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPV 216 (221)
T ss_dssp CCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEE
T ss_pred cCCeEEEEEEEccc---C-CCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEE
Confidence 89999999999997 5 89999999999999999999999998643 38899999999995
No 12
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=1.3e-66 Score=457.48 Aligned_cols=209 Identities=43% Similarity=0.858 Sum_probs=194.2
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcCC
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 169 (308)
||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-G 79 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-G 79 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999 999999999999999999999999999999999996 8899999999999999998 8
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeCCCCCC
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTGPCGNT 247 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~~c~~~ 247 (308)
|++|++|||.. ..+.|+ ........++|.+|..++..++++||++|++|||+|+|+++ +|++|++|||+.+|++.
T Consensus 80 i~~e~~yPY~~-~~~~C~--~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~ 156 (216)
T 1ppo_A 80 IHLRSKYPYKA-KQGTCR--AKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTK 156 (216)
T ss_dssp BCBTTTSCCCS-SCCCCC--GGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSC
T ss_pred cCccccCCccC-CCCCcC--CCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCC
Confidence 99999999999 889998 54233567889999999877899999999999999999995 89999999999889888
Q ss_pred CCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 248 PNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 248 ~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
.+|||+|||||++ + |++|||||||||++|||+|||||+|+.+. .|+|||+++++||+
T Consensus 157 ~~HaV~iVGyg~~---~-g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~ 214 (216)
T 1ppo_A 157 VDHAVTAVGYGKS---G-GKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPT 214 (216)
T ss_dssp CCEEEEEEEEEEE---T-TEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEE
T ss_pred CCEEEEEEEeecc---C-CccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEe
Confidence 8999999999998 5 89999999999999999999999999643 38899999999995
No 13
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=1e-66 Score=459.36 Aligned_cols=210 Identities=46% Similarity=0.882 Sum_probs=193.9
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC---CCCCCCCcHHHHHHHHHHc
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST---LNGCAKNFLENAFEYIRQY 167 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~~ 167 (308)
||++||||++|+|+||||||. |||||||++++||++++|+++++++||+|+|+||+. +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999 999999999999999999999999999999999997 6799999999999999988
Q ss_pred CCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeCCCC
Q 044448 168 QRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTGPCG 245 (308)
Q Consensus 168 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~~c~ 245 (308)
+||++|++|||.. ..+.|+ ........++|.+|..++..++++|+++|.+|||+|+|++. +|++|++|||+.+|+
T Consensus 81 ~Gi~~e~~yPY~~-~~~~C~--~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~ 157 (220)
T 3p5u_A 81 GGINTEANYPYTA-EEGQCN--LDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCG 157 (220)
T ss_dssp TCBCBTTTSCCCS-SCCCCC--HHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred CCcCccccccccc-CCCCcC--cCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCC
Confidence 7999999999999 889998 54233446789999999878999999999889999999996 899999999998898
Q ss_pred CCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 246 NTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 246 ~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
+..+|||+|||||++ + |++|||||||||++|||+|||||+|+.+..++|||+++++||+
T Consensus 158 ~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~ 216 (220)
T 3p5u_A 158 TAVDHAVTIVGYGTE---G-GIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPV 216 (220)
T ss_dssp CSCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEE
T ss_pred CccceEEEEEEEecC---C-CceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEE
Confidence 889999999999977 5 8999999999999999999999999974224899999999995
No 14
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=2.5e-66 Score=456.16 Aligned_cols=209 Identities=42% Similarity=0.861 Sum_probs=193.9
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcCC
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 169 (308)
||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|++++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-G 79 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-G 79 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHc-C
Confidence 699999999999999999999 999999999999999999999999999999999996 8899999999999999998 8
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeCCCCCC
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTGPCGNT 247 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~~c~~~ 247 (308)
|++|++|||.. ..+.|+ ........++|.+|..++..++++||++|++|||+|+|++. +|++|++|||+.+|++.
T Consensus 80 i~~e~~yPY~~-~~~~C~--~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~ 156 (218)
T 1yal_A 80 VHTSKVYPYQA-KQYKCR--ATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTK 156 (218)
T ss_dssp BCBTTTSCCCS-SCCCCC--GGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSC
T ss_pred CCccccccccC-CCCCcc--cCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCC
Confidence 99999999999 889999 54233467889999999877899999999999999999996 89999999999889888
Q ss_pred CCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 248 PNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 248 ~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
++|||+|||||++ + |++|||||||||++|||+|||||+|+.+. .|+|||+++++||+
T Consensus 157 ~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 214 (218)
T 1yal_A 157 LDHAVTAVGYGTS---D-GKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPF 214 (218)
T ss_dssp CCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEE
T ss_pred CCEEEEEEEeecc---C-CccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEE
Confidence 9999999999998 5 89999999999999999999999999632 38899999999995
No 15
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=2.8e-66 Score=454.86 Aligned_cols=208 Identities=44% Similarity=0.861 Sum_probs=194.0
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcCC
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 169 (308)
||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 80 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASHGCNGGWMNNAFQYIITNGG 80 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 799999999999999999999 999999999999999999999999999999999998 889999999999999988779
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeCCCCCC
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTGPCGNT 247 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~~c~~~ 247 (308)
|++|++|||.. ..+.|+ .. ....++|.+|..++..++++||++|++|||+|+|++. +|+.|++|||+.+|++.
T Consensus 81 i~~e~~yPY~~-~~~~C~--~~--~~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~ 155 (215)
T 1iwd_A 81 IDTQQNYPYSA-VQGSCK--PY--RLRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTA 155 (215)
T ss_dssp BCBTTTSCCCS-SCCCCC--TT--CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCC
T ss_pred cccccccCccC-CCCCCC--CC--CCceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCc
Confidence 99999999999 889999 54 2467889999999877899999999999999999998 69999999999889888
Q ss_pred CCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 248 PNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 248 ~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
++|||+|||||++ + |++|||||||||++|||+|||||+|+.+. .|+|||+++++||+
T Consensus 156 ~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 213 (215)
T 1iwd_A 156 QNHGVVIVGYGTQ---S-GKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPT 213 (215)
T ss_dssp CCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEE
T ss_pred CCEEEEEEEEecc---C-CccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeee
Confidence 9999999999997 5 89999999999999999999999999643 37899999999995
No 16
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=8.7e-67 Score=483.47 Aligned_cols=246 Identities=24% Similarity=0.415 Sum_probs=180.8
Q ss_pred hcCC-CCCCCCHHHHHhhhcCCCCCCCC-CCCCCCCCccccCCCCCCCCCceeecCCC----CCCCccCCCCC-CchHHH
Q 044448 46 LRLN-KFADLTREKFLASYTGYKPPPTD-HPHSNRSNWFKNLNSSKMSFYDSIDWNER----GAVTPVKDQGS-YCCWAF 118 (308)
Q Consensus 46 ~g~N-~fsDlt~eEf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~pv~dQg~-gsCwAf 118 (308)
+|+| +|+|||.|||++++ +..+.... ..... .. +..... ..+||++||||++ |.|+||||||. ||||||
T Consensus 28 ~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~~~~~-~~-~~~~~~-~~~lP~s~DwR~~w~~~g~vtpVkdQg~CGSCWAF 103 (325)
T 3hhi_A 28 AKYDGVMQNITLREAKRLN-GVIKKNNNASILPK-RR-FTEEEA-RAPLPSSFDSAEAWPNCPTIPQIADQSACGSCWAV 103 (325)
T ss_dssp -----------------------------CCSCB-CC-CCHHHH-HCCCCSCEEHHHHSTTCTTTTCCCBCCSSBCHHHH
T ss_pred EecccccccCCHHHHHHHh-CCCCCCcccccccC-cc-cccccc-ccCCCCcEehhHhcCCCCccccccCCCCccccHHH
Confidence 8999 89999999999875 43321111 00000 11 211111 1259999999998 89999999999 999999
Q ss_pred HHHHHHHHHHHHhcCC-cccCCHHHHhhcCC--CCCCCCCcHHHHHHHHHHcCCCCCCCCcCCC-CCC----------CC
Q 044448 119 TAVATVEGLNKIRTGQ-LVTRSKHQLVDCST--LNGCAKNFLENAFEYIRQYQRLASECVYPYQ-GRQ----------DY 184 (308)
Q Consensus 119 a~~~~~e~~~~i~~~~-~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~-~~~----------~~ 184 (308)
|++++||++++|+++. ++.||+|+|+||+. +.||+||++..|++|+.++ ||++|++|||. + . .+
T Consensus 104 sa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~-~c~~~~~~~~~~~ 181 (325)
T 3hhi_A 104 AAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST-GLVSDYCQPYPFP-HCSHHSKSKNGYP 181 (325)
T ss_dssp HHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-CBCBTTTSCCSSC-CCBSSSCCTTCCC
T ss_pred HHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-CCCcccccCCccc-cccccccccccCC
Confidence 9999999999999997 89999999999987 7899999999999999988 99999999998 3 2 24
Q ss_pred CCcc--c------ccC-----CCCccEEEeeeEEcCCCCHHHHHHHHh-cCCeEEEEecC-cccccCCceEeCCCCC-CC
Q 044448 185 YCDW--W------RSS-----ASGKYGAIRGYQYVQPATEEGLQDVVS-RQPVSVAIDAT-WFNFYHGGVFTGPCGN-TP 248 (308)
Q Consensus 185 ~C~~--~------~~~-----~~~~~~~i~~~~~v~~~~~~~lk~~l~-~gPV~v~i~~~-~f~~y~~Giy~~~c~~-~~ 248 (308)
.|.. . ..+ .......+.+|. + .++++||++|+ +|||+|+|+++ +|++|++|||..+|+. .+
T Consensus 182 ~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GVy~~~~~~~~~ 258 (325)
T 3hhi_A 182 PCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLG 258 (325)
T ss_dssp BGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEEEEEEHHHHTCCSSEECCCSCCEEE
T ss_pred CCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEEEEeccccccccCceecCCCCCCCC
Confidence 5640 0 000 112234567776 5 58999999998 69999999999 9999999999988655 46
Q ss_pred CeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCcccccccccc
Q 044448 249 NHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYP 307 (308)
Q Consensus 249 ~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp 307 (308)
+|||+|||||++ + |++|||||||||++|||+|||||+|+. |.|||+++++++
T Consensus 259 ~HaV~iVGyG~~---~-g~~YWivkNSWG~~WGe~GY~~i~rg~---n~CGI~~~~~~g 310 (325)
T 3hhi_A 259 GHAVRLVGWGTS---N-GVPYWKIANSWNTEWGMDGYFLIRRGS---SECGIEDGGSAG 310 (325)
T ss_dssp EEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTSCEEEE
T ss_pred CEEEEEEEEEec---C-CceEEEEEeCCCCCcccCCEEEEEcCC---CeecCccceEEe
Confidence 999999999987 5 899999999999999999999999996 789999998764
No 17
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=5.3e-66 Score=453.32 Aligned_cols=207 Identities=41% Similarity=0.794 Sum_probs=192.8
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcCC
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 169 (308)
||++||||++|+|+||||||. |||||||++++||++++++++.++.||+|+|+||+. +.||+||++..|++|+.+++|
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 80 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG 80 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 799999999999999999999 999999999999999999999999999999999997 899999999999999988879
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHh-cCCeEEEEecC--cccccCCceEeCC-CC
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVS-RQPVSVAIDAT--WFNFYHGGVFTGP-CG 245 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~gPV~v~i~~~--~f~~y~~Giy~~~-c~ 245 (308)
|++|++|||.. ..+.|+ .. ......++++|..++..++++||++|+ +|||+|+|++. +|++|++|||..+ |.
T Consensus 81 i~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 156 (215)
T 3kwz_A 81 IDSEDAYPYVG-QEESCM--YN-PTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 156 (215)
T ss_dssp EEBTTTSCCCS-SCCCCC--CC-GGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCC
T ss_pred ccccccCCCcc-CCCccc--cC-CCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCC
Confidence 99999999999 889998 54 445567889999998779999999999 59999999997 8999999999876 85
Q ss_pred -CCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 246 -NTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 246 -~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
..++|||+|||||++ + +++|||||||||++|||+|||||+|+.+ |+|||+++++||+
T Consensus 157 ~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WG~~Gy~~i~r~~~--n~Cgi~~~~~~p~ 214 (215)
T 3kwz_A 157 SDNLNHAVLAVGYGIQ---K-GNKHWIIKNSWGENWGNKGYILMARNKN--NACGIANLASFPK 214 (215)
T ss_dssp TTCCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEESSSS--SGGGTTSSCEEEC
T ss_pred CChhhCEEEEEEEecc---C-CceEEEEECCcCcccccCCEEEEecCCC--CccCcCCceeeee
Confidence 469999999999987 5 8999999999999999999999999974 7899999999996
No 18
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=7.6e-66 Score=456.26 Aligned_cols=212 Identities=48% Similarity=0.899 Sum_probs=194.8
Q ss_pred CCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC--CCCCCCCcHHHHHHHHHHc
Q 044448 91 SFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST--LNGCAKNFLENAFEYIRQY 167 (308)
Q Consensus 91 ~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~~ 167 (308)
+||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 3899999999999999999999 999999999999999999999999999999999996 7899999999999999887
Q ss_pred CCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEec-C-cccccCCceEeCCCC
Q 044448 168 QRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDA-T-WFNFYHGGVFTGPCG 245 (308)
Q Consensus 168 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~-~-~f~~y~~Giy~~~c~ 245 (308)
+||++|++|||.. ..+.|. ........++|.+|..++..+++.|+++|++|||+|+|++ . +|++|++|||+.+|+
T Consensus 81 ~Gi~~e~~yPY~~-~~~~C~--~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~ 157 (229)
T 1s4v_A 81 GGITTEANYPYEA-YDGTCD--VSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCG 157 (229)
T ss_dssp TCBCBTTTSCCCS-SCCCCC--HHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred CCccccccCCccC-CCCCCC--CCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCC
Confidence 7999999999999 889998 5422345678999999987789999999999999999999 4 899999999998898
Q ss_pred CCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 246 NTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 246 ~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
+..+|||+|||||++. + |++|||||||||++|||+|||||+|+.+. .|+|||+++++||+
T Consensus 158 ~~~~HaV~iVGyg~~~--~-g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~ 218 (229)
T 1s4v_A 158 TELDHGVAIVGYGTTI--D-GTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPI 218 (229)
T ss_dssp CCCCEEEEEEEEEECT--T-SCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEE
T ss_pred CCCCeEEEEEEecccc--C-CCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeE
Confidence 8899999999999874 5 78999999999999999999999999643 48999999999995
No 19
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=1.2e-65 Score=462.57 Aligned_cols=212 Identities=46% Similarity=0.899 Sum_probs=195.8
Q ss_pred CCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC--CCCCCCCcHHHHHHHHHHc
Q 044448 91 SFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST--LNGCAKNFLENAFEYIRQY 167 (308)
Q Consensus 91 ~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~~ 167 (308)
+||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.++
T Consensus 3 ~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~~ 82 (262)
T 2fo5_A 3 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNN 82 (262)
T ss_dssp CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHHT
T ss_pred CCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 5999999999999999999999 999999999999999999999999999999999996 8899999999999999987
Q ss_pred CCCCCCCCcCCCCCCCCCCcccccC--CCCc-cEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeC
Q 044448 168 QRLASECVYPYQGRQDYYCDWWRSS--ASGK-YGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTG 242 (308)
Q Consensus 168 ~Gi~~e~~yPY~~~~~~~C~~~~~~--~~~~-~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~ 242 (308)
+||++|++|||.. ..+.|+ ... .... .++|.+|..++..++++|+++|++|||+|+|+++ +|++|++|||+.
T Consensus 83 ~Gi~~e~~yPY~~-~~~~C~--~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~ 159 (262)
T 2fo5_A 83 GGLITEAAYPYRA-ARGTCN--VARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTG 159 (262)
T ss_dssp TCEEBTTTSCCCS-SCCCCC--HHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECC
T ss_pred CCcCchhcCCCcC-ccCccC--CcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECC
Confidence 7999999999999 889998 541 1344 6889999999877899999999999999999997 899999999998
Q ss_pred CCCCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 243 PCGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 243 ~c~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
+|++..+|||+|||||++. + |++|||||||||++|||+|||||+|+.+. .|+|||++.++||+
T Consensus 160 ~c~~~~~HaV~IVGyg~~~--~-G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~ 223 (262)
T 2fo5_A 160 ECGTELDHGVAVVGYGVAE--D-GKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPV 223 (262)
T ss_dssp CCCCCCCEEEEEEEEEECT--T-SCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEE
T ss_pred CCCCcCCEEEEEEEEcccC--C-CceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEE
Confidence 8988889999999999874 5 88999999999999999999999999764 57899999999985
No 20
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=1.2e-65 Score=452.01 Aligned_cols=207 Identities=42% Similarity=0.797 Sum_probs=192.4
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcC-C---CCCCCCCcHHHHHHHHHH
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCS-T---LNGCAKNFLENAFEYIRQ 166 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~-~---~~gC~GG~~~~a~~~~~~ 166 (308)
||++||||++|+|+||||||. |||||||++++||++++++++++++||+|+|+||+ . +.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 899999999999999999999 99999999999999999999999999999999999 3 789999999999999987
Q ss_pred cCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc-CCeEEEEecC--cccccCCceEeCC
Q 044448 167 YQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR-QPVSVAIDAT--WFNFYHGGVFTGP 243 (308)
Q Consensus 167 ~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gPV~v~i~~~--~f~~y~~Giy~~~ 243 (308)
+.||++|++|||.. ..+.|. .. .....+++.+|..++..++++||++|++ |||+++|++. +|++|++|||..+
T Consensus 82 ~~Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~ 157 (218)
T 3ovx_A 82 NKGIDSDASYPYKA-MDQKCQ--YD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEP 157 (218)
T ss_dssp HTCEEBTTTSCCCS-SCCCCC--CC-GGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCT
T ss_pred hCCcCcccccCccC-CCCccc--CC-CccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCC
Confidence 66999999999999 889999 54 4456678899999987799999999995 9999999997 7999999999987
Q ss_pred -CCCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 244 -CGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 244 -c~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
|...++|||+|||||++ + |++|||||||||++|||+|||||+|+.+ |+|||+++++||+
T Consensus 158 ~~~~~~~HaV~iVGyg~~---~-g~~ywivkNSWG~~WG~~Gy~~i~~~~~--n~cgi~~~~~~p~ 217 (218)
T 3ovx_A 158 SCTQNVNHGVLVVGYGDL---N-GKEYWLVKNSWGHNFGEEGYIRMARNKG--NHCGIASFPSYPE 217 (218)
T ss_dssp TCCSCCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSSS--SGGGTTTSCEEEE
T ss_pred CCCcccCcEEEEEEEecc---C-CceEEEEECCCCCccccCCEEEEecCCC--CcccccCceeeee
Confidence 87789999999999988 5 8999999999999999999999999963 7899999999995
No 21
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=6.1e-65 Score=445.51 Aligned_cols=205 Identities=43% Similarity=0.863 Sum_probs=190.2
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcCC
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 169 (308)
||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|++++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-G 79 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRSYGCNGGYPWSALQLVAQY-G 79 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHT-C
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999 999999999999999999999999999999999997 8899999999999999988 8
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeCCCCCC
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTGPCGNT 247 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~~c~~~ 247 (308)
|++|++|||.. ..+.|+ ........++|++|..++..++++||++|++|||+|+|++. +|++|++|||+.+|++.
T Consensus 80 i~~e~~yPY~~-~~~~C~--~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~ 156 (212)
T 2cio_A 80 IHYRNTYPYEG-VQRYCR--SREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNK 156 (212)
T ss_dssp BCBTTTSCCCS-SCCCCC--TTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSC
T ss_pred cCcccccCCcC-CCCCcC--CCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCC
Confidence 99999999999 889999 55223567889999999877899999999999999999997 79999999999889888
Q ss_pred CCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 248 PNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 248 ~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
++|||+|||||+ +|||||||||++|||+|||||+|+.+. .|+|||+++++||+
T Consensus 157 ~~HaV~iVGyg~--------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 210 (212)
T 2cio_A 157 VDHAVAAVGYGP--------NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 210 (212)
T ss_dssp CCEEEEEEEEET--------TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEE
T ss_pred CCEEEEEEEecC--------CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEE
Confidence 899999999975 499999999999999999999999643 48899999999995
No 22
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.7e-65 Score=452.09 Aligned_cols=208 Identities=42% Similarity=0.792 Sum_probs=187.7
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcCC
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 169 (308)
||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 80 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTXXXXXXGGDADDAFRWVITNGG 80 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC------CCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCcccccCCCCHHHHHHHHHHcCC
Confidence 799999999999999999999 999999999999999999999999999999999998 899999999999999998889
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCC-ceEeC-CCC
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHG-GVFTG-PCG 245 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~-Giy~~-~c~ 245 (308)
|++|++|||.+ ..+.|. .. .. ..++|.+|..++ .++++||++|++|||+|+|++. +|++|++ |||.. +|.
T Consensus 81 i~~e~~yPY~~-~~~~C~--~~-~~-~~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~ 154 (222)
T 3u8e_A 81 IASDANYPYTG-VDGTCD--LN-KP-IAARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCS 154 (222)
T ss_dssp BCBTTTSCCCS-SCCCCC--CC-SC-CCBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCC
T ss_pred ccchhcCCCcc-cCCccc--cC-CC-CeEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCccc
Confidence 99999999999 899999 54 22 278899999998 7899999999889999999997 8999999 99998 587
Q ss_pred C---CCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 246 N---TPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 246 ~---~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
. .++|||+|||||++. + +++|||||||||++|||+|||||+|+.+. .++|||+++++||+
T Consensus 155 ~~~~~~~HaV~iVGyg~~~--~-g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~ 218 (222)
T 3u8e_A 155 DDPATVDHTVLIVGYGSNG--T-NADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPT 218 (222)
T ss_dssp CCGGGCCEEEEEEEEEESS--T-TCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEE
T ss_pred CCCCcCCEEEEEEEEeecC--C-CCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEE
Confidence 6 689999999999874 4 78999999999999999999999999852 35999999999995
No 23
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=5.8e-65 Score=446.02 Aligned_cols=205 Identities=42% Similarity=0.845 Sum_probs=190.6
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcCC
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 169 (308)
||++||||++|+|+||||||. |||||||++++||++++++++.+++||+|+|+||+. +.||+||++..|++|++++ |
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-G 79 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERRSYGCRGGFPLYALQYVANS-G 79 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCCCCCCCCCCHHHHHHHHHHc-C
Confidence 799999999999999999999 999999999999999999999999999999999998 8899999999999999998 9
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeCCCCCC
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTGPCGNT 247 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~~c~~~ 247 (308)
|++|++|||.+ ..+.|. ........++|.+|..++..+++.|+++|++|||+|+|+++ +|+.|++|||..+|.+.
T Consensus 80 i~~e~~yPY~~-~~~~C~--~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 156 (213)
T 3ioq_A 80 IHLRQYYPYEG-VQRQCR--ASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTS 156 (213)
T ss_dssp EEBGGGSCCCS-SCCCCC--GGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSC
T ss_pred CCchhccCcCC-CCCCCC--CCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCc
Confidence 99999999999 889998 54345677889999999877888888888899999999997 89999999999888888
Q ss_pred CCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 248 PNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 248 ~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
++|||+|||||+ +|||||||||++|||+|||||+|+.+. .|+|||+++++||+
T Consensus 157 ~~HaV~iVGyg~--------~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~ 210 (213)
T 3ioq_A 157 IDHAVAAVGYGN--------DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPT 210 (213)
T ss_dssp CCEEEEEEEEET--------TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEE
T ss_pred cCceEEEEecCC--------CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeE
Confidence 999999999975 599999999999999999999999743 48999999999995
No 24
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=5.9e-65 Score=448.14 Aligned_cols=209 Identities=39% Similarity=0.779 Sum_probs=189.5
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC---CCCCCCCcHHHHHHHHHHc
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST---LNGCAKNFLENAFEYIRQY 167 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~~ 167 (308)
||++||||++|+|+||||||. |||||||++++||++++|++++++.||+|+|+||+. +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999 999999999999999999999999999999999986 7899999999999999744
Q ss_pred CCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc-CCeEEEEecC--cccccCCceEeCC-
Q 044448 168 QRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR-QPVSVAIDAT--WFNFYHGGVFTGP- 243 (308)
Q Consensus 168 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gPV~v~i~~~--~f~~y~~Giy~~~- 243 (308)
.||++|++|||.. ..+.|+ .. .....++|++|..++. ++++||++|++ |||+|+|++. +|++|++|||..+
T Consensus 81 ~Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~ 155 (220)
T 2xu3_A 81 GGLDSEESYPYEA-TEESCK--YN-PKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPD 155 (220)
T ss_dssp TCEEBTTTSCCCS-SCCCCC--CC-GGGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTT
T ss_pred CCcccccccCCcc-cCcCcc--CC-CCCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCC
Confidence 5999999999999 889998 54 3345678999999986 89999999995 9999999997 7999999999987
Q ss_pred CCC-CCCeEEEEEEeCCcCC-CCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 244 CGN-TPNHGVTIVGYGTTTE-AEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 244 c~~-~~~Hav~iVGyg~~~~-~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
|+. .++|||+|||||++.. .+ |++|||||||||++|||+|||||+|+.+ |+|||+++++||+
T Consensus 156 c~~~~~~HaV~iVGygd~~~~~~-g~~yWivkNSWG~~WG~~Gy~~i~~~~~--n~Cgi~~~~~~p~ 219 (220)
T 2xu3_A 156 CSSEDMDHGVLVVGYGFESTESD-NNKYWLVKNSWGEEWGMGGYVKMAKDRR--NHCGIASAASYPT 219 (220)
T ss_dssp CCSSCCCEEEEEEEEEECCCSSS-CCEEEEEECSBCTTSTBTTEEEEECSSS--SGGGTTTSCEEEE
T ss_pred CCCCCCCeEEEEEEcCCccccCC-CCcEEEEEeCCCCCcccCcEEEEecCCC--CcCCccccceeee
Confidence 875 6899999999994210 15 8899999999999999999999999964 7899999999995
No 25
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.5e-64 Score=444.11 Aligned_cols=205 Identities=36% Similarity=0.649 Sum_probs=185.3
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHc--
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQY-- 167 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~-- 167 (308)
||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~~ 80 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENN 80 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSSSCGGGCCCHHHHHHHHHHHST
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCCCCCCCCCCHHHHHHHHHHhcc
Confidence 699999999999999999999 999999999999999999999999999999999998 8899999999999999875
Q ss_pred CCCCCCCCcCCCCCCC---CCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHh-cCCeEEEEecCcccccCCceEeCC
Q 044448 168 QRLASECVYPYQGRQD---YYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVS-RQPVSVAIDATWFNFYHGGVFTGP 243 (308)
Q Consensus 168 ~Gi~~e~~yPY~~~~~---~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~gPV~v~i~~~~f~~y~~Giy~~~ 243 (308)
+||++|++|||.. .. +.|. .. .....++|.+|..++ .++++||++|+ +|||+|+|++.+|++|++|||...
T Consensus 81 gGi~~e~~yPY~~-~~~~~~~C~--~~-~~~~~~~i~~~~~v~-~~~~~ik~~l~~~gPV~v~~~~~~f~~Y~~Giy~~~ 155 (215)
T 3i06_A 81 GAVYTEDSYPYAS-GEGISPPCT--TS-GHTVGATITGHVELP-QDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSC 155 (215)
T ss_dssp TEEEC-CCSCCCC-TTSCCCCCC--CS-SCCEEEEEEEEEECC-SCHHHHHHHHHHHCCEEEEECCTTGGGCCSSEECSC
T ss_pred ccccccCccCCcC-CCCCCCccc--cC-CcccceEecceEEeC-ChHHHHHHHHHHCCCEEEEEEchHHhcCCCCcccCC
Confidence 5799999999997 44 3788 54 344567899999998 48999999998 599999999889999999999753
Q ss_pred CCCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 244 CGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 244 c~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
+...++|||+|||||++ + +++|||||||||++|||+|||||+|+. |+|||+++++||+
T Consensus 156 ~~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~Gy~~i~rg~---n~cgi~~~~~~~~ 213 (215)
T 3i06_A 156 VSEQLDHGVLLVGYNDS---A-AVPYWIIKNSWTTQWGEEGYIRIAKGS---NQCLVKEEASSAV 213 (215)
T ss_dssp CCSCCCEEEEEEEEESS---S-SSCEEEEECSBCTTSTBTTEEEEESSS---CGGGTTSSEEEEE
T ss_pred CCCccCcEEEEEEEecc---C-CcEEEEEECCCCCCcccCceEEEecCC---CeecCCCceeEEe
Confidence 34568999999999987 5 899999999999999999999999996 7899999999985
No 26
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=1.4e-64 Score=443.77 Aligned_cols=205 Identities=43% Similarity=0.881 Sum_probs=190.4
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcCC
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 169 (308)
||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|++++ |
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~-G 79 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERRSHGCDGGYQTTSLQYVVDN-G 79 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999 999999999999999999999999999999999997 8899999999999999998 9
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeCCCCCC
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTGPCGNT 247 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~~c~~~ 247 (308)
|++|++|||.. ..+.|+ ........++|.+|..++..++++||++|++|||+|+|++. +|++|++|||..+|++.
T Consensus 80 i~~e~~yPY~~-~~~~C~--~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~ 156 (214)
T 2bdz_A 80 VHTEREYPYEK-KQGRCR--AKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTN 156 (214)
T ss_dssp EEBTTTSCCCS-SCCCCC--TTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSC
T ss_pred CCccccCCCCC-CCCCCC--CCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCC
Confidence 99999999999 889999 55233467889999999877899999999999999999998 89999999999889888
Q ss_pred CCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 248 PNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 248 ~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
++|||+|||||+ +|||||||||++|||+|||||+|+.+. .|+|||+++++||+
T Consensus 157 ~~HaV~iVGyg~--------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 210 (214)
T 2bdz_A 157 TDHAVTAVGYGK--------TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPI 210 (214)
T ss_dssp CCEEEEEEEECS--------SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEE
T ss_pred CCeEEEEEEcCC--------CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEE
Confidence 999999999976 499999999999999999999999643 37899999999995
No 27
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=3.3e-65 Score=449.79 Aligned_cols=206 Identities=37% Similarity=0.771 Sum_probs=191.8
Q ss_pred CCceeecCCCC-CCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC---CCCCCCCcHHHHHHHHHH
Q 044448 92 FYDSIDWNERG-AVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST---LNGCAKNFLENAFEYIRQ 166 (308)
Q Consensus 92 lP~~~Dwr~~g-~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~ 166 (308)
||++||||++| +|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 8999999999 999999999999999999999999999999999986 789999999999999998
Q ss_pred cCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHh-cCCeEEEEecC-cccccCCceEeCC-
Q 044448 167 YQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVS-RQPVSVAIDAT-WFNFYHGGVFTGP- 243 (308)
Q Consensus 167 ~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~gPV~v~i~~~-~f~~y~~Giy~~~- 243 (308)
+.||++|++|||.. ..+.|+ .. .....+++.+|..++..++++||++|+ +|||+++|++. +|+.|++|||..+
T Consensus 81 ~~Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~Y~~Giy~~~~ 156 (220)
T 8pch_A 81 NKGIMGEDTYPYKG-QDDHCK--FQ-PDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTS 156 (220)
T ss_dssp HTCEEBTTTSCCCS-SCCCCC--CC-GGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCCHHHHTCCSSEECCSS
T ss_pred cCCcCcccccCccC-CCCCCC--CC-CCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCCcccCCc
Confidence 77999999999999 889998 54 445667899999998889999999998 59999999999 9999999999876
Q ss_pred CCC---CCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 244 CGN---TPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 244 c~~---~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
|.. .++|||+|||||++ + |++|||||||||++|||+|||||+|+. |+|||+++++||+
T Consensus 157 ~~~~~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~Gy~~i~r~~---n~cgi~~~~~~~~ 217 (220)
T 8pch_A 157 CHKTPDKVNHAVLAVGYGEE---N-GIPYWIVKNSWGPQWGMNGYFLIERGK---NMCGLAACASYPI 217 (220)
T ss_dssp CCCSTTTCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTTSCEEEE
T ss_pred CCCCCCcCCcEEEEEEEEcc---C-CeeEEEEECCCCcCcccCCEEEEEcCC---CccccCCCceeEe
Confidence 754 58999999999987 5 899999999999999999999999996 7899999999985
No 28
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1e-64 Score=453.39 Aligned_cols=210 Identities=37% Similarity=0.730 Sum_probs=192.8
Q ss_pred CCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcC
Q 044448 91 SFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQ 168 (308)
Q Consensus 91 ~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~ 168 (308)
+||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.+++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~~~~gC~GG~~~~a~~y~~~~~ 80 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVDESEGCYNGWHYQSFEWVVKHG 80 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSBTTTBCCHHHHHHHHHHTT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHhC
Confidence 3899999999999999999999 999999999999999999999999999999999997 88999999999999999877
Q ss_pred CCCCCCCcCCCCCCCCCCcccccCCCCccEEEeee---EEcCCCCHHHHHHHHhc----CCeEEEEecCcccccCCceEe
Q 044448 169 RLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGY---QYVQPATEEGLQDVVSR----QPVSVAIDATWFNFYHGGVFT 241 (308)
Q Consensus 169 Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~---~~v~~~~~~~lk~~l~~----gPV~v~i~~~~f~~y~~Giy~ 241 (308)
||++|++|||.+ ..+.|+ .. .....++|++| ..++..++++||++|++ |||+|+|++.+|++|++|||.
T Consensus 81 Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~~~f~~Y~~Giy~ 156 (246)
T 2b1m_A 81 GIASEADYPYKA-RDGKCK--AN-EIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDAKDFHFYSGGIYD 156 (246)
T ss_dssp CBCBTTTSCCCS-SCCCCC--GG-GCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECCTTGGGCCSSEEC
T ss_pred CcCccccccccC-CCCcCc--CC-CCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEcchhhcccceeec
Confidence 999999999999 889999 55 34556789999 88887789999999997 999999998889999999999
Q ss_pred CC-CCCC--CCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 242 GP-CGNT--PNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 242 ~~-c~~~--~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
.+ |++. ++|||+|||||++ + |++|||||||||++|||+|||||+|+.+. .|+|||++.++||+
T Consensus 157 ~~~c~~~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~ 223 (246)
T 2b1m_A 157 GGNCSSPYGINHFVLIVGYGSE---D-GVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPI 223 (246)
T ss_dssp CTTCCSSCCCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEE
T ss_pred CCCCCCCCcCceEEEEEEEecc---C-CceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEE
Confidence 84 8865 8999999999997 5 89999999999999999999999999633 37899999999985
No 29
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=1.9e-64 Score=441.12 Aligned_cols=202 Identities=46% Similarity=0.877 Sum_probs=188.3
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcCC
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 169 (308)
||++||||++|+|+||||||. |||||||++++||++++|+++..+.||+|+|+||+. +.||+||++..|++|+.++.|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~G 80 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKNHGCLGGAFVFAYQYIINNGG 80 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 799999999999999999999 999999999999999999999999999999999997 889999999999999988779
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeCCCCCC
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTGPCGNT 247 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~~c~~~ 247 (308)
|++|++|||.. ..+.|+ . ..+.++|.+|..++..++++||++|++|||+|+|++. +|++|++|||+.+|++.
T Consensus 81 i~~e~~yPY~~-~~~~C~--~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~ 154 (208)
T 1o0e_A 81 IDTQANYPYKA-VQGPCQ--A---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTK 154 (208)
T ss_dssp BCBTTTSCCCS-SCCCCC--C---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSC
T ss_pred cCcccccCccC-CCCcCC--C---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCc
Confidence 99999999999 889999 5 3456789999999877899999999999999999997 79999999999889888
Q ss_pred CCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 248 PNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 248 ~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
++|||+|||||+ +|||||||||++|||+|||||+|+.+ .|.|||+++++||+
T Consensus 155 ~~HaV~iVGyg~--------~yWivkNSWG~~WGe~Gy~~i~~~~~-~~~Cgi~~~~~~p~ 206 (208)
T 1o0e_A 155 LNHGVTIVGYQA--------NYWIVRNSWGRYWGEKGYIRMLRVGG-CGLCGIARLPYYPT 206 (208)
T ss_dssp CCEEEEEEEECS--------SEEEEECSBCTTSTBTTEEEEECCST-TCGGGTTSSCEEEE
T ss_pred CCEEEEEEEeCC--------CeEEEEcCCCCcccCCcEEEEEcCCC-CCcCCCcccceeee
Confidence 999999999976 49999999999999999999999962 27899999999995
No 30
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=7.5e-65 Score=445.64 Aligned_cols=205 Identities=35% Similarity=0.642 Sum_probs=188.2
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcCC
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~G 169 (308)
||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~i~~~~G 80 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGG 80 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcC
Confidence 799999999999999999999 999999999999999999999999999999999998 889999999999999988779
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHh-cCCeEEEEecCcccccCCceEeCC---CC
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVS-RQPVSVAIDATWFNFYHGGVFTGP---CG 245 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~gPV~v~i~~~~f~~y~~Giy~~~---c~ 245 (308)
|++|++|||.+ ..+.|+ .. .....+++.++..++ .++++||++|+ +|||+|+|++..|++|++|||..+ |+
T Consensus 81 i~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~i~-~~~~~ik~~l~~~GPV~v~i~~~~f~~Y~~Giy~~~~~~c~ 155 (214)
T 1m6d_A 81 LETEDDYSYQG-HMQSCQ--FS-AEKAKVYIQDSVELS-QNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCS 155 (214)
T ss_dssp BCBTTTSCCCS-SCCCCC--CC-GGGCCBCCSEEEECC-SCHHHHHHHHHHHCCEEEEECTHHHHHCCSSEECCCGGGSC
T ss_pred cccccCcCcCC-CCCcCC--CC-cccceEEecCEEEeC-hHHHHHHHHHHhCCCEEEEEEechhhhcCCceecCCCCcCC
Confidence 99999999999 889998 54 333456788999887 48999999998 599999999888999999999863 76
Q ss_pred C-CCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 246 N-TPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 246 ~-~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
. .++|||+|||||++ + |++|||||||||++|||+|||||+|+. |.|||+++++||+
T Consensus 156 ~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~Gy~~i~r~~---n~Cgi~~~~~~~~ 212 (214)
T 1m6d_A 156 PWLIDHAVLLVGYGQR---S-DVPFWAIKNSWGTDWGEKGYYYLHRGS---GACGVNTMASSAV 212 (214)
T ss_dssp TTCCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEESSS---CGGGTTTTCEEEE
T ss_pred CCcCCEEEEEEEEeec---C-CcEEEEEEeCCCCCcccCcEEEEEcCC---CccccCceeEEEE
Confidence 5 58999999999997 5 899999999999999999999999996 7899999999985
No 31
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=5.8e-65 Score=449.36 Aligned_cols=212 Identities=37% Similarity=0.785 Sum_probs=193.8
Q ss_pred CCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC---CCCCCCCcHHHHHHHHHH
Q 044448 91 SFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST---LNGCAKNFLENAFEYIRQ 166 (308)
Q Consensus 91 ~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~ 166 (308)
+||++||||++|+|+||||||. |||||||++++||+++++++++.+.||+|+|+||+. +.||+||++..|++|+.+
T Consensus 6 ~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~~ 85 (224)
T 3f75_A 6 ELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLD 85 (224)
T ss_dssp GSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHH
T ss_pred CCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHHH
Confidence 5999999999999999999999 999999999999999999999999999999999997 789999999999999998
Q ss_pred cCCCCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC--cccccCCceEeCCC
Q 044448 167 YQRLASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT--WFNFYHGGVFTGPC 244 (308)
Q Consensus 167 ~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~--~f~~y~~Giy~~~c 244 (308)
+.||++|++|||.+ ..+.|+ .. .....++|.+|..++..++++|+++|++|||+|+|++. +|++|++|||+..|
T Consensus 86 ~~Gi~~e~~yPY~~-~~~~C~--~~-~~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~ 161 (224)
T 3f75_A 86 SGGICSEDAYPYLA-RDEECR--AQ-SCEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASC 161 (224)
T ss_dssp HTCBCBTTTSCCCS-SCCCCC--GG-GSCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCC
T ss_pred hCCccccccCCCcC-CCCCCC--cC-CCCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCC
Confidence 55999999999999 889998 55 34456779999999878999999999999999999997 79999999999669
Q ss_pred CCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 245 GNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 245 ~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
+..++|||+|||||++. .+ +++|||||||||++||++|||||+|+....|.|||+++++||+
T Consensus 162 ~~~~~Hav~iVGyg~~~-~~-g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~ 223 (224)
T 3f75_A 162 GTDLDHGVLLVGYGTDK-ES-KKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPV 223 (224)
T ss_dssp CCCCCEEEEEEEEEEET-TT-TEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEE
T ss_pred CCccCeEEEEEEEeccc-CC-CCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeee
Confidence 88899999999999873 13 7899999999999999999999999962227899999999995
No 32
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=3.2e-64 Score=449.60 Aligned_cols=211 Identities=36% Similarity=0.673 Sum_probs=191.6
Q ss_pred CCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcC
Q 044448 91 SFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQ 168 (308)
Q Consensus 91 ~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~ 168 (308)
+||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.++.
T Consensus 19 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~~~gC~GG~~~~a~~y~~~~~ 98 (243)
T 3bwk_A 19 LDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVKNNGCYGGYITNAFDDMIDLG 98 (243)
T ss_dssp CCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTTSCGGGCCCHHHHHHHHHHTT
T ss_pred cCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhC
Confidence 5999999999999999999999 999999999999999999999999999999999998 88999999999999999856
Q ss_pred CCCCCCCcCCCCCCCCC-CcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC-cccccCCceEeCCCCC
Q 044448 169 RLASECVYPYQGRQDYY-CDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT-WFNFYHGGVFTGPCGN 246 (308)
Q Consensus 169 Gi~~e~~yPY~~~~~~~-C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~-~f~~y~~Giy~~~c~~ 246 (308)
||++|++|||.. ..+. |+ .+ .....++|++|..++..++++||++| |||+|+|++. +|+.|++|||+.+|+.
T Consensus 99 Gi~~e~~yPY~~-~~~~~C~--~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~~~f~~Y~~Giy~~~c~~ 172 (243)
T 3bwk_A 99 GLCSQDDYPYVS-NLPETCN--LK-RCNERYTIKSYVSIPDDKFKEALRYL--GPISISIAASDDFAFYRGGFYDGECGA 172 (243)
T ss_dssp SBCBTTTSCCCT-TSCCCCC--GG-GCSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCCHHHHTCCSSSCCCCCCS
T ss_pred CcccccccCCcC-CCCCcCC--CC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecChhHHhcCCceecCCCCC
Confidence 999999999999 8788 98 54 34567889999999877899999999 9999999999 9999999999888876
Q ss_pred CCCeEEEEEEeCCcCC-------CCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 247 TPNHGVTIVGYGTTTE-------AEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 247 ~~~Hav~iVGyg~~~~-------~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
.++|||+|||||++.. +. |++|||||||||++|||+|||||+|+.+. .+.|||+++++||+
T Consensus 173 ~~~HaV~iVGyg~~~~~~~~~~~~~-g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~ 241 (243)
T 3bwk_A 173 APNHAVILVGYGMKDIYNEDTGRME-KFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPL 241 (243)
T ss_dssp SCCEEEEEEEEEEEEEECTTTCSEE-EEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEE
T ss_pred cCCeEEEEEEecCccccccccccCC-CCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEe
Confidence 6999999999998630 12 57899999999999999999999999742 23499999999995
No 33
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=4.2e-64 Score=448.31 Aligned_cols=211 Identities=33% Similarity=0.647 Sum_probs=191.6
Q ss_pred CCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-CCCCCCCcHHHHHHHHHHcC
Q 044448 91 SFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-LNGCAKNFLENAFEYIRQYQ 168 (308)
Q Consensus 91 ~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~~ 168 (308)
+||++||||++|+|+||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||++..|++|+.++.
T Consensus 17 ~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~~~gC~GG~~~~a~~yi~~~~ 96 (241)
T 2oul_A 17 FDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFKNYGCNGGLINNAFEDMIELG 96 (241)
T ss_dssp CCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTTSCTTBCBCHHHHHHHHHHTT
T ss_pred cCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHhC
Confidence 5999999999999999999999 999999999999999999999999999999999998 88999999999999999856
Q ss_pred CCCCCCCcCCCCCCCCC-CcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhcCCeEEEEecC-cccccCCceEeCCCCC
Q 044448 169 RLASECVYPYQGRQDYY-CDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSRQPVSVAIDAT-WFNFYHGGVFTGPCGN 246 (308)
Q Consensus 169 Gi~~e~~yPY~~~~~~~-C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~gPV~v~i~~~-~f~~y~~Giy~~~c~~ 246 (308)
||++|++|||.. ..+. |+ .+ .....++|++|..++..++++||++| |||+|+|++. +|++|++|||+.+|+.
T Consensus 97 Gi~~e~~yPY~~-~~~~~C~--~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~~~f~~Y~~Giy~~~c~~ 170 (241)
T 2oul_A 97 GICPDGDYPYVS-DAPNLCN--ID-RCTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVSDDFAFYKEGIFDGECGD 170 (241)
T ss_dssp SBCBTTSSCCCT-TSCCCCC--TT-SSSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBCHHHHTCCSSBCCSCBCS
T ss_pred CcCccccCCCcC-CCCCcCC--CC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecCcchhhcCCcEEcCcCCC
Confidence 999999999999 8888 99 54 34567889999999877899999999 9999999999 9999999999888876
Q ss_pred CCCeEEEEEEeCCcCC-------CCCCCCeEEEecCCCCCcCCCceEEEEeCCCC-CCCccccccccccC
Q 044448 247 TPNHGVTIVGYGTTTE-------AEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG-SGLCNIAANAAYPL 308 (308)
Q Consensus 247 ~~~Hav~iVGyg~~~~-------~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~-~~~Cgi~~~~~yp~ 308 (308)
.++|||+|||||++.. +. |++|||||||||++|||+|||||+|+.+. .+.|||+++++||+
T Consensus 171 ~~~HaV~iVGyg~~~~~~~~~~~~~-g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~ 239 (241)
T 2oul_A 171 QLNHAVMLVGFGMKEIVNPLTKKGE-KHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPL 239 (241)
T ss_dssp SCCEEEEEEEEEEEEEECTTTCSEE-EEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEE
T ss_pred CCCEEEEEEEeccccccccccccCC-CCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEe
Confidence 6999999999998630 12 57899999999999999999999999742 23399999999995
No 34
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=4.2e-64 Score=443.30 Aligned_cols=205 Identities=26% Similarity=0.501 Sum_probs=189.6
Q ss_pred CCCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCCCCCCCCCcHHHHHHHHHHcCC
Q 044448 91 SFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCSTLNGCAKNFLENAFEYIRQYQR 169 (308)
Q Consensus 91 ~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~~~~~~G 169 (308)
+||++||||++|+|+||||||. |||||||++++||++++++++.++.||+|+|+||+.+.||+||++..|++|++++ |
T Consensus 9 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~~~~~-G 87 (222)
T 3f5v_A 9 NAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCASQHGCHGDTIPRGIEYIQHN-G 87 (222)
T ss_dssp CCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTCSSTTBCCCHHHHHHHHHHH-C
T ss_pred CCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcCCCCCCCCCHHHHHHHHHHc-C
Confidence 6999999999999999999999 9999999999999999999999999999999999988899999999999999998 9
Q ss_pred CCCCCCcCCCCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc--CCeEEEEecC---cccccCCceEeCC-
Q 044448 170 LASECVYPYQGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR--QPVSVAIDAT---WFNFYHGGVFTGP- 243 (308)
Q Consensus 170 i~~e~~yPY~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~--gPV~v~i~~~---~f~~y~~Giy~~~- 243 (308)
|++|++|||.+ ..+.|+ . .....+++++|..++..++++||++|++ |||+|+|++. +|++|++|||..+
T Consensus 88 i~~e~~yPY~~-~~~~C~--~--~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~ 162 (222)
T 3f5v_A 88 VVQESYYRYVA-REQSCR--R--PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRD 162 (222)
T ss_dssp EEBGGGSCCCS-SCCCCC--C--CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCC
T ss_pred CCchhhCCCcc-cCCCcc--C--CcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCC
Confidence 99999999999 888998 4 3456788999999987899999999995 8999999983 7999999987554
Q ss_pred C-CCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCccccccccccC
Q 044448 244 C-GNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 244 c-~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp~ 308 (308)
| ...++|||+|||||++ + |++|||||||||++|||+|||||+|+. |+|||+++++||+
T Consensus 163 ~~~~~~~HaV~iVGyg~~---~-g~~ywivkNSWG~~WGe~Gy~~i~r~~---n~cgi~~~~~~p~ 221 (222)
T 3f5v_A 163 NGYQPNYHAVNIVGYSNA---Q-GVDYWIVRNSWDTNWGDNGYGYFAANI---DLMMIEEYPYVVI 221 (222)
T ss_dssp CSSSCEEEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTTSCEEEE
T ss_pred CCCCccCcEEEEEEEecc---C-CCEEEEEEcCCCCCcccCCEEEEEcCC---CeecCCCceeEEe
Confidence 4 4569999999999987 5 899999999999999999999999996 8899999999995
No 35
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=5e-63 Score=457.30 Aligned_cols=244 Identities=25% Similarity=0.446 Sum_probs=193.7
Q ss_pred hcCCCCCCCCHHHHHhhhcCCCCCCCCCCCCCCCCccccCCCCCCCCCceeecCCC----CCCCccCCCCC-CchHHHHH
Q 044448 46 LRLNKFADLTREKFLASYTGYKPPPTDHPHSNRSNWFKNLNSSKMSFYDSIDWNER----GAVTPVKDQGS-YCCWAFTA 120 (308)
Q Consensus 46 ~g~N~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~pv~dQg~-gsCwAfa~ 120 (308)
+|+| |+|++.||++. ++|.++...... .+ +..... .+||++||||++ +.|+||||||. |||||||+
T Consensus 27 ~~~n-f~~~~~e~~~~-~lg~~~~~~~~~----~~-~~~~~~--~~lP~s~DwR~~~~~c~~vtpVkdQg~CGSCWAFsa 97 (317)
T 3pbh_A 27 AGHN-FYNVDMSYLKR-LCGTFLGGPKPP----QR-VMFTED--LKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGA 97 (317)
T ss_dssp ECCC-CSSCCHHHHHH-TCCBCTTCCCCS----EE-ECCCSC--CCCCSSEEHHHHCTTCGGGTCCCBCCSSCCHHHHHH
T ss_pred Eeec-cccCCHHHHHH-HcCCCCCccccC----cc-cccccc--cCCCCCEechhccCCCCCcCCccccCCccchHHHHH
Confidence 8999 99988877765 455544222111 11 211111 369999999987 68999999999 99999999
Q ss_pred HHHHHHHHHHhcCC--cccCCHHHHhhcCC---CCCCCCCcHHHHHHHHHHcCCCCCCCCc-------CCCCC-------
Q 044448 121 VATVEGLNKIRTGQ--LVTRSKHQLVDCST---LNGCAKNFLENAFEYIRQYQRLASECVY-------PYQGR------- 181 (308)
Q Consensus 121 ~~~~e~~~~i~~~~--~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~~~Gi~~e~~y-------PY~~~------- 181 (308)
+++||++++|+++. ++.||+|+|+||+. +.||+||++..|++|++++ ||++|.+| ||...
T Consensus 98 ~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~~~c~PY~~~~c~~~~~ 176 (317)
T 3pbh_A 98 VEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEHHVN 176 (317)
T ss_dssp HHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCCCBSSCCCSCCCCCCCT
T ss_pred HHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCCCCCcCcccCccccccc
Confidence 99999999999874 79999999999986 6899999999999999988 99999998 99841
Q ss_pred -CCCCCccc-------ccCCC-Cc--c----EEEeeeEEcCCCCHHHHHHHHh-cCCeEEEEecC-cccccCCceEeCCC
Q 044448 182 -QDYYCDWW-------RSSAS-GK--Y----GAIRGYQYVQPATEEGLQDVVS-RQPVSVAIDAT-WFNFYHGGVFTGPC 244 (308)
Q Consensus 182 -~~~~C~~~-------~~~~~-~~--~----~~i~~~~~v~~~~~~~lk~~l~-~gPV~v~i~~~-~f~~y~~Giy~~~c 244 (308)
..+.|... ..+.. .. . ........++ .++++||++|+ +|||+|+|+++ +|++|++|||..+|
T Consensus 177 ~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GVy~~~~ 255 (317)
T 3pbh_A 177 GSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVT 255 (317)
T ss_dssp TCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEEEEGGGGGEEEEEECCCS
T ss_pred CcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEEecccccCCCCcEEccCC
Confidence 34455410 11000 00 0 0112223555 58999999998 69999999999 99999999999887
Q ss_pred CCC-CCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCCCCCcccccccccc
Q 044448 245 GNT-PNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGGSGLCNIAANAAYP 307 (308)
Q Consensus 245 ~~~-~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~~~~Cgi~~~~~yp 307 (308)
+.. ++|||+|||||++ + |++|||||||||++|||+|||||+|+. |.|||++.++..
T Consensus 256 ~~~~~~HaV~iVGyG~~---~-g~~YWivkNSWG~~WGe~GY~ri~rg~---n~CgI~~~~~a~ 312 (317)
T 3pbh_A 256 GEMMGGHAIRILGWGVE---N-GTPYWLVANSWNTDWGDNGFFKILRGQ---DHCGIESEVVAG 312 (317)
T ss_dssp CCEEEEEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECSS---CGGGTTTSCEEC
T ss_pred CCCCCCEEEEEEEEEEe---C-CeeEEEEEcCCCCCcCCCcEEEEEcCC---CcccCCCceEee
Confidence 764 6999999999987 5 899999999999999999999999997 789999998754
No 36
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=3.5e-60 Score=430.90 Aligned_cols=209 Identities=22% Similarity=0.435 Sum_probs=183.4
Q ss_pred CCCCceeecCCC---CCCCccCCCC---C-CchHHHHHHHHHHHHHHHhcC-C--cccCCHHHHhhcCCCCCCCCCcHHH
Q 044448 90 MSFYDSIDWNER---GAVTPVKDQG---S-YCCWAFTAVATVEGLNKIRTG-Q--LVTRSKHQLVDCSTLNGCAKNFLEN 159 (308)
Q Consensus 90 ~~lP~~~Dwr~~---g~v~pv~dQg---~-gsCwAfa~~~~~e~~~~i~~~-~--~~~lS~q~l~dc~~~~gC~GG~~~~ 159 (308)
.+||++||||++ ++|+|||||| . |||||||++++||++++|+++ . .+.||+|+|+||+.+.||+||++..
T Consensus 34 ~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~~~gC~GG~~~~ 113 (277)
T 1deu_A 34 ADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGNAGSCEGGNDLS 113 (277)
T ss_dssp GGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSSSEETBEECHHH
T ss_pred ccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcCCCCCCCCCHHH
Confidence 369999999998 6899999999 8 999999999999999999875 3 4799999999999778999999999
Q ss_pred HHHHHHHcCCCCCCCCcCCCCCCCCCCcccc-c-------------CCCCccEEEeeeEEcCCCCHHHHHHHHh-cCCeE
Q 044448 160 AFEYIRQYQRLASECVYPYQGRQDYYCDWWR-S-------------SASGKYGAIRGYQYVQPATEEGLQDVVS-RQPVS 224 (308)
Q Consensus 160 a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~-~-------------~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~gPV~ 224 (308)
|++|+.++ ||++|++|||.. ..+.|. . + ......+++.+|..++ ++++||++|+ +|||+
T Consensus 114 a~~yi~~~-Gi~~e~~yPY~~-~~~~C~--~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV~ 187 (277)
T 1deu_A 114 VWDYAHQH-GIPDETCNNYQA-KDQECD--KFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPIS 187 (277)
T ss_dssp HHHHHHHT-CBCBGGGSCCCS-SCCCCC--HHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCEE
T ss_pred HHHHHHHc-CCCcCccCCCcC-CCCCcc--ccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCEE
Confidence 99999987 999999999999 878887 3 1 0122456788898886 5889999988 59999
Q ss_pred EEEecC-cccccCCceEeCC-CCCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCCCC---CC--C
Q 044448 225 VAIDAT-WFNFYHGGVFTGP-CGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGVGG---SG--L 297 (308)
Q Consensus 225 v~i~~~-~f~~y~~Giy~~~-c~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~---~~--~ 297 (308)
|+|++. +|++|++|||..+ |...++|||+|||||++ + |++|||||||||++|||+|||||+|+.+. .+ .
T Consensus 188 v~i~~~~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~---~-g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~ 263 (277)
T 1deu_A 188 CGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGIS---D-GTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYN 263 (277)
T ss_dssp EEECCCHHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTB
T ss_pred EEEecccccccCcCcEECCCCCCCcCCeEEEEEEeccc---C-CccEEEEEeCCCCccCCCcEEEEEcCCCccccccccc
Confidence 999999 9999999999887 55569999999999987 5 89999999999999999999999999730 01 7
Q ss_pred ccccccccccC
Q 044448 298 CNIAANAAYPL 308 (308)
Q Consensus 298 Cgi~~~~~yp~ 308 (308)
|||+++++|++
T Consensus 264 cgIe~~~~~~~ 274 (277)
T 1deu_A 264 LAIEEHCTFGD 274 (277)
T ss_dssp TTTTSCEEEEE
T ss_pred ceeccccEeec
Confidence 99999998863
No 37
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=1.2e-59 Score=425.40 Aligned_cols=209 Identities=26% Similarity=0.467 Sum_probs=175.7
Q ss_pred CCCceeecCCC----CCCCccCCCCC-CchHHHHHHHHHHHHHHHhcC--CcccCCHHHHhhcCC---CCCCCCCcHHHH
Q 044448 91 SFYDSIDWNER----GAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTG--QLVTRSKHQLVDCST---LNGCAKNFLENA 160 (308)
Q Consensus 91 ~lP~~~Dwr~~----g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~--~~~~lS~q~l~dc~~---~~gC~GG~~~~a 160 (308)
+||++||||++ +.|+||||||. |||||||++++||++++|+++ .++.||+|+|+||+. +.||+||++..|
T Consensus 6 ~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a 85 (266)
T 3cbj_A 6 KLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEA 85 (266)
T ss_dssp CCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHHH
T ss_pred CCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHHH
Confidence 59999999886 78999999999 999999999999999999875 478999999999985 689999999999
Q ss_pred HHHHHHcCCCCC-------CCCcCCCCC--------CCCCCccc-------ccCCC--C-----ccEEEeeeEEcCCCCH
Q 044448 161 FEYIRQYQRLAS-------ECVYPYQGR--------QDYYCDWW-------RSSAS--G-----KYGAIRGYQYVQPATE 211 (308)
Q Consensus 161 ~~~~~~~~Gi~~-------e~~yPY~~~--------~~~~C~~~-------~~~~~--~-----~~~~i~~~~~v~~~~~ 211 (308)
++|+.++ ||++ |++|||... ..+.|... ..+.. . .......+..++ .++
T Consensus 86 ~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~~ 163 (266)
T 3cbj_A 86 WNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSE 163 (266)
T ss_dssp HHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECC-SCH
T ss_pred HHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeC-CCH
Confidence 9999987 9999 999999830 44556410 11100 0 001122334565 589
Q ss_pred HHHHHHHh-cCCeEEEEecC-cccccCCceEeCCCCCC-CCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEE
Q 044448 212 EGLQDVVS-RQPVSVAIDAT-WFNFYHGGVFTGPCGNT-PNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRI 288 (308)
Q Consensus 212 ~~lk~~l~-~gPV~v~i~~~-~f~~y~~Giy~~~c~~~-~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i 288 (308)
++||++|+ +|||+|+|++. +|++|++|||..+|+.. ++|||+|||||++ + |++|||||||||++|||+|||||
T Consensus 164 ~~i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~---~-g~~yWivkNSWG~~WGe~Gy~~i 239 (266)
T 3cbj_A 164 KDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE---N-GTPYWLVANSWNTDWGDNGFFKI 239 (266)
T ss_dssp HHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEEE
T ss_pred HHHHHHHHhcCCEEEEEEeccchhhcCCeEEecCCCCccCCeEEEEEEeccc---C-CceEEEEEcCCCCccCCCCEEEE
Confidence 99999998 59999999998 99999999999876654 6999999999997 5 89999999999999999999999
Q ss_pred EeCCCCCCCccccccccccC
Q 044448 289 FRGVGGSGLCNIAANAAYPL 308 (308)
Q Consensus 289 ~~~~~~~~~Cgi~~~~~yp~ 308 (308)
+|+. |.|||++.+++++
T Consensus 240 ~rg~---n~cgI~~~~~~~~ 256 (266)
T 3cbj_A 240 LRGQ---DHCGIESEVVAGI 256 (266)
T ss_dssp ECSS---CGGGTTTSCEECC
T ss_pred EcCC---CcccccCceEEEE
Confidence 9996 7899999998874
No 38
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=1.6e-59 Score=421.90 Aligned_cols=206 Identities=27% Similarity=0.533 Sum_probs=173.0
Q ss_pred CCCceeecCCC----CCCCccCCCCC-CchHHHHHHHHHHHHHHHhcC--CcccCCHHHHhhcCC--CCCCCCCcHHHHH
Q 044448 91 SFYDSIDWNER----GAVTPVKDQGS-YCCWAFTAVATVEGLNKIRTG--QLVTRSKHQLVDCST--LNGCAKNFLENAF 161 (308)
Q Consensus 91 ~lP~~~Dwr~~----g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~--~~~~lS~q~l~dc~~--~~gC~GG~~~~a~ 161 (308)
+||++||||++ +.|+||||||. |||||||++++||++++|+++ .++.||+|+|+||+. +.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 59999999997 68999999999 999999999999999999976 689999999999986 7899999999999
Q ss_pred HHHHHcCCCCCCCCc-------CCC---------CCCCCCCccc--------ccCCCC---cc----EEEeeeEEcCCCC
Q 044448 162 EYIRQYQRLASECVY-------PYQ---------GRQDYYCDWW--------RSSASG---KY----GAIRGYQYVQPAT 210 (308)
Q Consensus 162 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~~C~~~--------~~~~~~---~~----~~i~~~~~v~~~~ 210 (308)
+|++++ ||++|++| ||. + ..+.|... ..+... .. ........++ .+
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~-~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~ 158 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKG-KYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-ND 158 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCS-SSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SC
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccC-cCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-Cc
Confidence 999988 99999988 997 3 44455310 111000 00 0111223455 58
Q ss_pred HHHHHHHHh-cCCeEEEEecC-cccccCCceEeCCCCC-CCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEE
Q 044448 211 EEGLQDVVS-RQPVSVAIDAT-WFNFYHGGVFTGPCGN-TPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMR 287 (308)
Q Consensus 211 ~~~lk~~l~-~gPV~v~i~~~-~f~~y~~Giy~~~c~~-~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~ 287 (308)
+++||++|+ +|||+|+|++. +|++|++|||..+|.. .++|||+|||||++ + +++|||||||||++|||+||||
T Consensus 159 ~~~i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~---~-g~~ywivkNSWG~~WG~~Gy~~ 234 (254)
T 3qsd_A 159 EKAIQKEIMKYGPVEAGFTVYEDFLNYKSGIYKHITGETLGGHAIRIIGWGVE---N-KAPYWLIANSWNEDWGENGYFR 234 (254)
T ss_dssp HHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE---T-TEEEEEEECSBCTTSTBTTEEE
T ss_pred HHHHHHHHHHcCCEEEEEEeccccccccCCeeccCCCCCCCCeEEEEEEEeec---C-CeeEEEEEeCCCCCcccCCeEE
Confidence 999999998 59999999998 9999999999988654 46999999999987 5 8999999999999999999999
Q ss_pred EEeCCCCCCCccccccccc
Q 044448 288 IFRGVGGSGLCNIAANAAY 306 (308)
Q Consensus 288 i~~~~~~~~~Cgi~~~~~y 306 (308)
|+|+. |+|||++.++.
T Consensus 235 i~rg~---n~CgI~~~~~~ 250 (254)
T 3qsd_A 235 IVRGR---DECSIESEVTA 250 (254)
T ss_dssp EECSS---CGGGTTSSEEE
T ss_pred EEcCC---CeecCCCceEe
Confidence 99996 78999999864
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=2.5e-54 Score=390.47 Aligned_cols=209 Identities=22% Similarity=0.404 Sum_probs=165.4
Q ss_pred ceeecCCC-CCCC--ccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC---CCCCCCCc-HHHHHHHHH
Q 044448 94 DSIDWNER-GAVT--PVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST---LNGCAKNF-LENAFEYIR 165 (308)
Q Consensus 94 ~~~Dwr~~-g~v~--pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~---~~gC~GG~-~~~a~~~~~ 165 (308)
...|||++ |+++ ||||||. |||||||++++||++++|+++.++.||+|+|+||+. +.||+||. +..++.++.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 46899999 6887 9999999 999999999999999999999999999999999986 68999996 556678888
Q ss_pred HcCCCCCCCCcCCCCC-CCCCCcccccCC----------------CCccEEEeeeEEcCC----CC----HHHHHHHHh-
Q 044448 166 QYQRLASECVYPYQGR-QDYYCDWWRSSA----------------SGKYGAIRGYQYVQP----AT----EEGLQDVVS- 219 (308)
Q Consensus 166 ~~~Gi~~e~~yPY~~~-~~~~C~~~~~~~----------------~~~~~~i~~~~~v~~----~~----~~~lk~~l~- 219 (308)
+++||++|++|||... ..+.|+ .... ....+++.+|..++. .+ +++||++|+
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~ 166 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCP--KVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMN 166 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCC--CCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHH
T ss_pred HcCCCCCccccCCcCCCCCCCCC--CccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHh
Confidence 8845999999999861 246787 4311 112356778887764 24 478999998
Q ss_pred cCCeEEEEecCcccccC-CceE-eCCCCC-CCCeEEEEEEeCCcCCCCCC--CCeEEEecCCCCCcCCCceEEEEeCCCC
Q 044448 220 RQPVSVAIDATWFNFYH-GGVF-TGPCGN-TPNHGVTIVGYGTTTEAEGQ--QPYWLVKNRWGTNWDEGGSMRIFRGVGG 294 (308)
Q Consensus 220 ~gPV~v~i~~~~f~~y~-~Giy-~~~c~~-~~~Hav~iVGyg~~~~~~~g--~~ywivkNSWG~~WGe~Gy~~i~~~~~~ 294 (308)
+|||+|+|++.+|+.|+ +|++ ..+|+. .++|||+|||||++...+ | ++|||||||||++|||+|||||+|+..
T Consensus 167 ~GPV~v~i~~~~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~-g~~~~YWivkNSWG~~WGe~GY~ri~~~g~- 244 (265)
T 2wbf_X 167 KGSVIAYIKAENVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSE-GEKKSYWIVRNSWGPYWGDEGYFKVDMYGP- 244 (265)
T ss_dssp HSCEEEEECGGGGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTT-SCEEEEEEEECSBCTTSTBTTEEEEESSCC-
T ss_pred cCCEEEEEEcccccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccC-CCcCCEEEEEcCCCCccCCCCEEEEEecCC-
Confidence 59999999987776664 4433 335875 589999999999851113 5 689999999999999999999998643
Q ss_pred CCCccccc---ccccc
Q 044448 295 SGLCNIAA---NAAYP 307 (308)
Q Consensus 295 ~~~Cgi~~---~~~yp 307 (308)
|.|||+. .++||
T Consensus 245 -n~Cgi~~~~~~~~~~ 259 (265)
T 2wbf_X 245 -THCHFNFIHSVVIFN 259 (265)
T ss_dssp -TTCSSCSCCEEEEEC
T ss_pred -CccCcceeEEEEecc
Confidence 7899555 55555
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=5.3e-53 Score=386.54 Aligned_cols=225 Identities=17% Similarity=0.207 Sum_probs=174.5
Q ss_pred cCCCCCCCCHHHHHhhhcCCCCCCCC-CCCCCCCCccccCCCCCCCCCceeecCCCCCCCccCCCCC-CchHHHHHHHHH
Q 044448 47 RLNKFADLTREKFLASYTGYKPPPTD-HPHSNRSNWFKNLNSSKMSFYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATV 124 (308)
Q Consensus 47 g~N~fsDlt~eEf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~ 124 (308)
.+|++.++..|.|+..+ |..++.+. +.. . +........+||++||||+++ ||||||. |||||||++++|
T Consensus 17 ~~~~~~~~~~~~~~~~l-G~~p~~~d~rd~----~-~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~al 87 (291)
T 3ois_A 17 RGSHMQTVLKRRKKSGY-GYIPDIADIRDF----S-YTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAAI 87 (291)
T ss_dssp ------CCCCCCCCTTC-CEECCCCCTTCC----B-CCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHHH
T ss_pred chhhHhHhhhccccccC-CCCCCCCccccc----c-cCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHHHH
Confidence 56788888888887754 55554433 221 1 111111012599999999984 9999999 999999999999
Q ss_pred HHHHHHhcCCcccCCHHHHh--hcCC----C-CCCCCCcHHHHHHHHHHcCCCCCCCCcCCCCCCC---CCCccccc---
Q 044448 125 EGLNKIRTGQLVTRSKHQLV--DCST----L-NGCAKNFLENAFEYIRQYQRLASECVYPYQGRQD---YYCDWWRS--- 191 (308)
Q Consensus 125 e~~~~i~~~~~~~lS~q~l~--dc~~----~-~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~---~~C~~~~~--- 191 (308)
|++++ +++..+.||+|+|+ +|.. + .+|.||++..|++|++++ ||++|++|||.+ .. +.|. ..
T Consensus 88 E~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~-~~~~~~~C~--~~~~~ 162 (291)
T 3ois_A 88 QFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGD-TPADPRTEE--FPPGA 162 (291)
T ss_dssp HHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCC-CCCCTTTCS--CCTTC
T ss_pred HHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCC-Ccccccccc--ccccc
Confidence 99885 46777899999998 6763 3 468899999999999988 999999999998 53 4565 21
Q ss_pred ---C-------CCCccEEEeeeEEcCCCCHHHHHHHHhc-CCeEEEEecC-cccccCC--ceEeCC-CCCC--CCeEEEE
Q 044448 192 ---S-------ASGKYGAIRGYQYVQPATEEGLQDVVSR-QPVSVAIDAT-WFNFYHG--GVFTGP-CGNT--PNHGVTI 254 (308)
Q Consensus 192 ---~-------~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gPV~v~i~~~-~f~~y~~--Giy~~~-c~~~--~~Hav~i 254 (308)
. .....++|.+|..|+. ++++|+++|++ |||+|+|+++ +|+.|++ |||..+ |... ++|||+|
T Consensus 163 ~~~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~i 241 (291)
T 3ois_A 163 PASKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLPTKNDTLEGGHAVLC 241 (291)
T ss_dssp GGGSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCCCTTSCEEEEEEEEE
T ss_pred cccCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCCCCCCCCcCCeEEEE
Confidence 0 0124578999999985 89999999995 8999999999 9999998 999887 5432 5999999
Q ss_pred EEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeCC
Q 044448 255 VGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRGV 292 (308)
Q Consensus 255 VGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~ 292 (308)
||||+ +++|||||||||++|||+|||||+|+.
T Consensus 242 VGy~~------~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 242 VGYDD------EIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp EEEET------TTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred EEEeC------CCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 99974 678999999999999999999999984
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=6.5e-41 Score=319.04 Aligned_cols=195 Identities=12% Similarity=0.130 Sum_probs=151.4
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHh-cCCcccCCH----------------HHHhhcCC-----
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIR-TGQLVTRSK----------------HQLVDCST----- 148 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~-~~~~~~lS~----------------q~l~dc~~----- 148 (308)
.|..|+++....++||+|||. |+|||||+++++|+.++++ ++..+.||+ |+|+||+.
T Consensus 48 ~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~~ 127 (453)
T 2cb5_A 48 AQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPE 127 (453)
T ss_dssp CCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred CCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCCc
Confidence 677898888888999999999 9999999999999999998 578899999 99999962
Q ss_pred ----------CCCCCCCcHHHHHHHHHHcCCCCCCCCcCCCCCCC---------------------------C------C
Q 044448 149 ----------LNGCAKNFLENAFEYIRQYQRLASECVYPYQGRQD---------------------------Y------Y 185 (308)
Q Consensus 149 ----------~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~---------------------------~------~ 185 (308)
+.+|+||.+..|+.++.+. ||+++++|||+. .. + .
T Consensus 128 d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~-~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 128 DGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESY-TTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCT-GGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred chhhHHHhcCCCCCCCCChHHHHHHHHHc-Cccchhhccccc-cccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 6799999999999999876 999999999987 31 2 1
Q ss_pred ----------------Ccc-------c-c-cC-----------C-----CCccE--EEeeeEEc---CCC----------
Q 044448 186 ----------------CDW-------W-R-SS-----------A-----SGKYG--AIRGYQYV---QPA---------- 209 (308)
Q Consensus 186 ----------------C~~-------~-~-~~-----------~-----~~~~~--~i~~~~~v---~~~---------- 209 (308)
|.- | . +. + ..... .+.+|..+ |..
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 510 0 1 00 0 00001 33444432 110
Q ss_pred -----------------CHHH----HHHHHhc-CCeEEEEecCcccccCCceEeCC-C----------------------
Q 044448 210 -----------------TEEG----LQDVVSR-QPVSVAIDATWFNFYHGGVFTGP-C---------------------- 244 (308)
Q Consensus 210 -----------------~~~~----lk~~l~~-gPV~v~i~~~~f~~y~~Giy~~~-c---------------------- 244 (308)
.++. ++.+|+. |||+++++++.+.++++|||+.+ |
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~~~ 365 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFG 365 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTTTEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHHTT
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeChhhccCCcEEcCccccchhhcCccccccCHHHHhhcc
Confidence 1334 4467775 89999999995556699999876 4
Q ss_pred CCCCCeEEEEEEeC--CcCCCCCCC-CeEEEecCCCCCcCCCceEEEEeC
Q 044448 245 GNTPNHGVTIVGYG--TTTEAEGQQ-PYWLVKNRWGTNWDEGGSMRIFRG 291 (308)
Q Consensus 245 ~~~~~Hav~iVGyg--~~~~~~~g~-~ywivkNSWG~~WGe~Gy~~i~~~ 291 (308)
.+..+|||+||||| .+. + |+ +|||||||||++||++|||+|+++
T Consensus 366 ~s~~~HAmlivGyg~~~d~--~-G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 366 ESLMTHAMTFTAVSEKDDQ--D-GAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp SCCCCEEEEEEEEEECTTS--C-SCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred CCCCCeEEEEEEecccccc--C-CCccEEEEEcCcCCCcCcCceEEechh
Confidence 23579999999999 653 5 77 999999999999999999999985
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=1.1e-39 Score=310.83 Aligned_cols=194 Identities=16% Similarity=0.130 Sum_probs=139.3
Q ss_pred CCceeecCCCCCCCccCCCCC-CchHHHHHHHHHHHHHHHh-cCCcccCCH----------------HHHhhcCC-----
Q 044448 92 FYDSIDWNERGAVTPVKDQGS-YCCWAFTAVATVEGLNKIR-TGQLVTRSK----------------HQLVDCST----- 148 (308)
Q Consensus 92 lP~~~Dwr~~g~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~-~~~~~~lS~----------------q~l~dc~~----- 148 (308)
.|..|+++....+|||||||. |+|||||+++++|+.++++ ++..+.||+ |+|+||+.
T Consensus 53 ~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~~ 132 (457)
T 2e01_A 53 DNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDS 132 (457)
T ss_dssp CCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTS
T ss_pred CCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCcccc
Confidence 677888888888999999999 9999999999999999998 788999999 78899974
Q ss_pred --------CCCCCCCcHHHHHHHHHHcCCCCCCCCcCC-CCC--------------------------------CC----
Q 044448 149 --------LNGCAKNFLENAFEYIRQYQRLASECVYPY-QGR--------------------------------QD---- 183 (308)
Q Consensus 149 --------~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~--------------------------------~~---- 183 (308)
+.+|+||.+..++.++.+. ||+++++||| +.. ..
T Consensus 133 r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~~ 211 (457)
T 2e01_A 133 RLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVT 211 (457)
T ss_dssp HHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHHH
T ss_pred hhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHHH
Confidence 6799999999999999887 9999999999 320 00
Q ss_pred -----------------CCCcccc----cC------------------------------------------CCCccEEE
Q 044448 184 -----------------YYCDWWR----SS------------------------------------------ASGKYGAI 200 (308)
Q Consensus 184 -----------------~~C~~~~----~~------------------------------------------~~~~~~~i 200 (308)
|.|+ . .. +-...+.+
T Consensus 212 ~~~~~l~~iy~il~~~LG~pP--~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~v 289 (457)
T 2e01_A 212 LREQMQREIFRLMSLFMDIPP--VQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKI 289 (457)
T ss_dssp HHHHHHHHHHHHHHHHSCCCS--SCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCC--CCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEE
Confidence 0111 1 00 00000000
Q ss_pred e-----------eeEEcCCCC-HHHHHHHHhc-CCeEEEEecCcccccCCceEeCCC--------------------C-C
Q 044448 201 R-----------GYQYVQPAT-EEGLQDVVSR-QPVSVAIDATWFNFYHGGVFTGPC--------------------G-N 246 (308)
Q Consensus 201 ~-----------~~~~v~~~~-~~~lk~~l~~-gPV~v~i~~~~f~~y~~Giy~~~c--------------------~-~ 246 (308)
. .|..+|... .+.++.+|+. |||++++++..|++|++|||+.+| . +
T Consensus 290 e~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s 369 (457)
T 2e01_A 290 DRLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTPKFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHES 369 (457)
T ss_dssp TTCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTTTTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSC
T ss_pred eccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcCHhHcccCceecccccchhhcCcccccCHHHhhccCCC
Confidence 0 133343111 1344556775 899999999977788999997665 2 3
Q ss_pred CCCeEEEEEEeCCcCCCCCCC--CeEEEecCCCCCcCCCceEEEEeC
Q 044448 247 TPNHGVTIVGYGTTTEAEGQQ--PYWLVKNRWGTNWDEGGSMRIFRG 291 (308)
Q Consensus 247 ~~~Hav~iVGyg~~~~~~~g~--~ywivkNSWG~~WGe~Gy~~i~~~ 291 (308)
..+|||+|||||.+. + |+ +|||||||||++||++|||+|+++
T Consensus 370 ~~~HAmlivGyg~d~--~-G~~p~yW~VkNSWG~~wG~~GY~~ms~~ 413 (457)
T 2e01_A 370 LMTAAMLITGCHVDE--T-SKLPLRYRVENSWGKDSGKDGLYVMTQK 413 (457)
T ss_dssp CCCEEEEEEEEEECT--T-TCCEEEEEEECSSCTTSTBTTEEEEEHH
T ss_pred CCCeEEEEEEEEecc--C-CCccCEEEEEeCccCCcCCCceEEeehh
Confidence 589999999999864 5 77 899999999999999999999985
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=2.8e-34 Score=268.19 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=70.1
Q ss_pred CCCccCCCCC-CchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhcCC-------------CCCCCCCcHHHHHHHHHHcC
Q 044448 103 AVTPVKDQGS-YCCWAFTAVATVEGLNKIRTGQLVTRSKHQLVDCST-------------LNGCAKNFLENAFEYIRQYQ 168 (308)
Q Consensus 103 ~v~pv~dQg~-gsCwAfa~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-------------~~gC~GG~~~~a~~~~~~~~ 168 (308)
.++||||||. |||||||+++++|+.++++++..+.||+|+|++|+. +.||+||.+..|+.|+.++
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 4899999999 999999999999999999999999999999999973 4799999999999999987
Q ss_pred CCCCCCCcC
Q 044448 169 RLASECVYP 177 (308)
Q Consensus 169 Gi~~e~~yP 177 (308)
||+++++||
T Consensus 100 Givpe~~YP 108 (383)
T 3pw3_A 100 GLVPEEEMR 108 (383)
T ss_dssp CCCBGGGSC
T ss_pred CcCcHHhCC
Confidence 999999999
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.59 E-value=2.6e-15 Score=115.70 Aligned_cols=63 Identities=32% Similarity=0.681 Sum_probs=57.6
Q ss_pred ChhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH------------hcCCCCCCCCHHHHHhhhcCCCCC
Q 044448 7 KTGNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF------------LRLNKFADLTREKFLASYTGYKPP 69 (308)
Q Consensus 7 ~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~------------~g~N~fsDlt~eEf~~~~~~~~~~ 69 (308)
.+..+...|++|+++|+|.|.+.+|+..|+.||++|+++ +|+|+|||||.+||+++++|++++
T Consensus 17 ~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 17 KEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp CHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTSCCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred CcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 447788999999999999999988999999999999998 899999999999999999987653
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.49 E-value=3.3e-14 Score=104.47 Aligned_cols=56 Identities=25% Similarity=0.462 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH----------------hcCCCCCCCCHHHHHhhhcCCCC
Q 044448 11 IAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF----------------LRLNKFADLTREKFLASYTGYKP 68 (308)
Q Consensus 11 ~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~----------------~g~N~fsDlt~eEf~~~~~~~~~ 68 (308)
.+..|++|+.+|+|.|.+.+|+..| .||++|++. +|+|+|+|||.+|| +.++|.++
T Consensus 6 ~~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~ 77 (80)
T 2l95_A 6 SDEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKV 77 (80)
T ss_dssp CHHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCC
Confidence 3468999999999999988899999 999999987 79999999999999 88887654
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=96.81 E-value=0.018 Score=47.28 Aligned_cols=127 Identities=15% Similarity=0.156 Sum_probs=87.0
Q ss_pred CCCC-CchHHHHHHHHHHHHHH--------HhcCCcccCCHHHHhhcCCCCCCCCCcHHHHHHHHHHcCCCCCCCCcCCC
Q 044448 109 DQGS-YCCWAFTAVATVEGLNK--------IRTGQLVTRSKHQLVDCSTLNGCAKNFLENAFEYIRQYQRLASECVYPYQ 179 (308)
Q Consensus 109 dQg~-gsCwAfa~~~~~e~~~~--------i~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 179 (308)
.||. +=|-+|+.++.|-+... |.+.-.+.+|+|+|.++ |..+...++|++.. |...
T Consensus 26 TQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t-------~~~~~q~Iky~~s~-G~~~------- 90 (183)
T 1pxv_A 26 QQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC-------ATFPNQMIEYGKSQ-GRDI------- 90 (183)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC-------CBCHHHHHHHHHHT-TCCC-------
T ss_pred ccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc-------CCCHHHHHHHHHHc-CcCh-------
Confidence 5999 99999999998876552 22222467888888874 45789999999855 4211
Q ss_pred CCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc-CCeEEEEecCcccccCCceEeCCCCCCCCeEEEEEEeC
Q 044448 180 GRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR-QPVSVAIDATWFNFYHGGVFTGPCGNTPNHGVTIVGYG 258 (308)
Q Consensus 180 ~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gPV~v~i~~~~f~~y~~Giy~~~c~~~~~Hav~iVGyg 258 (308)
+ +.. +. -+.+++++.+.+ -||.+...- ++........+||++||||-
T Consensus 91 -------~----------~~n----r~--ls~neV~~~i~~Nk~I~v~~~~---------v~e~~~~~~~gHA~av~Gya 138 (183)
T 1pxv_A 91 -------H----------YQE----GV--PSYNQVDQLTKDNVGIMILAQS---------VSQNPNDPHLGHALAVVGNA 138 (183)
T ss_dssp -------E----------EEE----SC--CCHHHHHHHHHTTCCEEEEEEC---------CCSSTTSCCCEEEEEEEEEE
T ss_pred -------h----------Hhc----CC--CCHHHHHHHHhcCCcEEEEccc---------cccCCCCccCceeEEEEeee
Confidence 0 000 02 257899999995 699887652 22222334689999999998
Q ss_pred CcCCCCCCCCeEEEecCCCCCcCCCceEEEEeC
Q 044448 259 TTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRG 291 (308)
Q Consensus 259 ~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~ 291 (308)
.- + +.++.+|=|=|- . |++-++.+
T Consensus 139 ~~---~-~~~~y~~WNPW~---~--~~~~~~a~ 162 (183)
T 1pxv_A 139 KI---N-DQEKLIYWNPWD---T--ELSIQDAD 162 (183)
T ss_dssp EE---T-TEEEEEEECTTC---S--SCEEEETT
T ss_pred ec---C-CCeEEEEeCCcc---C--CcEeecCC
Confidence 76 4 778999977773 3 67777654
No 47
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=96.51 E-value=0.023 Score=51.46 Aligned_cols=128 Identities=16% Similarity=0.182 Sum_probs=84.1
Q ss_pred CCCCC-CchHHHHHHHHHHHHH--------HHhcCCcccCCHHHHhhcCCCCCCCCCcHHHHHHHHHHcCCCCCCCCcCC
Q 044448 108 KDQGS-YCCWAFTAVATVEGLN--------KIRTGQLVTRSKHQLVDCSTLNGCAKNFLENAFEYIRQYQRLASECVYPY 178 (308)
Q Consensus 108 ~dQg~-gsCwAfa~~~~~e~~~--------~i~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 178 (308)
..||. +=|-+||.+++|-+.. .|.+.-.+.+|+++|.++ |..+...++|+... |.-.
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t-------s~~~~q~Iky~qsy-G~~~------ 266 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC-------ATFPNQMIEYGKSQ-GRDI------ 266 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC-------CCCHHHHHHHHHHT-TEEE------
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc-------CCCHHHHHHHHHHh-Ccch------
Confidence 35899 9999999999887644 122222467888888874 45788999998754 4311
Q ss_pred CCCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHh-cCCeEEEEecCcccccCCceEeCCCCCCCCeEEEEEEe
Q 044448 179 QGRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVS-RQPVSVAIDATWFNFYHGGVFTGPCGNTPNHGVTIVGY 257 (308)
Q Consensus 179 ~~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~gPV~v~i~~~~f~~y~~Giy~~~c~~~~~Hav~iVGy 257 (308)
.-....+ +.+.+++.+. +-||.|.+... .....+...+|||+||||
T Consensus 267 ----------------------~~~n~~l--s~deVk~~id~Nk~I~v~~~~v---------~~~~n~~~~gHAlavvGy 313 (367)
T 1x9y_A 267 ----------------------HYQEGVP--SYNQVDQLTKDNVGIMILAQSV---------SQNPNDPHLGHALAVVGN 313 (367)
T ss_dssp ----------------------EEEESCC--CHHHHHHHHHTTCCEEEEEEET---------TSCSSSCCCSEEEEEEEE
T ss_pred ----------------------hhhcCCC--CHHHHHHHHhcCCcEEEEcccc---------ccCCCCccCceeEEEEec
Confidence 0011122 5788898888 47999887642 111122367999999999
Q ss_pred CCcCCCCCCCCeEEEecCCCCCcCCCceEEEEeC
Q 044448 258 GTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFRG 291 (308)
Q Consensus 258 g~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~ 291 (308)
-.. + +.+|.++=|=| |.+ ++-++..
T Consensus 314 A~~---~-~~~~y~~WNPW---~~~--~~~~sa~ 338 (367)
T 1x9y_A 314 AKI---N-DQEKLIYWNPW---DTE--LSIQDAD 338 (367)
T ss_dssp EEE---T-TEEEEEEECTT---CSS--CEEEETT
T ss_pred ccc---C-CCcEEEEecCc---cCC--ceeecCC
Confidence 554 4 67899997766 432 6655543
No 48
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=96.30 E-value=0.069 Score=43.69 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=80.6
Q ss_pred CCCC-CchHHHHHHHHHHHHHH--------HhcCCcccCCHHHHhhcCCCCCCCCCcHHHHHHHHHHcCCCCCCCCcCCC
Q 044448 109 DQGS-YCCWAFTAVATVEGLNK--------IRTGQLVTRSKHQLVDCSTLNGCAKNFLENAFEYIRQYQRLASECVYPYQ 179 (308)
Q Consensus 109 dQg~-gsCwAfa~~~~~e~~~~--------i~~~~~~~lS~q~l~dc~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~ 179 (308)
.||. +=|-+|+.+++|-+... +.+.-.+.+|+++|..+ |..+...++|+++. |- + |
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~-------~~t~~e~iky~~s~-g~-~----~-- 81 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT-------GLTPREMIYFGQTQ-GR-S----P-- 81 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC-------CCCHHHHHHHHHHT-TC-C----C--
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc-------CCCHHHHHHHHHHc-CC-C----h--
Confidence 5899 99999999998876552 22223478999999965 34688999998776 32 1 0
Q ss_pred CCCCCCCcccccCCCCccEEEeeeEEcCCCCHHHHHHHHhc-CCeEEEEecCcccccCCceEeCCCCCCCCeEEEEEEeC
Q 044448 180 GRQDYYCDWWRSSASGKYGAIRGYQYVQPATEEGLQDVVSR-QPVSVAIDATWFNFYHGGVFTGPCGNTPNHGVTIVGYG 258 (308)
Q Consensus 180 ~~~~~~C~~~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~-gPV~v~i~~~~f~~y~~Giy~~~c~~~~~Hav~iVGyg 258 (308)
. . .. .. -+.+++++.+.+ -|+.+..+-. ..+.....+||++||||-
T Consensus 82 -------~--~--~n----------~~--ls~~eV~~~~~~nk~i~i~~~~v----------e~~~~~~~gHAlav~Gy~ 128 (174)
T 1cv8_A 82 -------Q--L--LN----------RM--TTYNEVDNLTKNNKGIAILGSRV----------ESRNGMHAGHAMAVVGNA 128 (174)
T ss_dssp -------E--E--ES----------SC--CCHHHHHHHHHTTCCEEEEEEES----------SCBTTBCCEEEEEEEEEE
T ss_pred -------h--h--hc----------CC--CCHHHHHHHHhcCCceEEEcccc----------cCCCCCCCceeEEEEeee
Confidence 0 0 00 01 257899999985 6887766531 111223579999999998
Q ss_pred CcCCCCCCCCeEEEecCCC
Q 044448 259 TTTEAEGQQPYWLVKNRWG 277 (308)
Q Consensus 259 ~~~~~~~g~~ywivkNSWG 277 (308)
.-. + |.+|.++=|=|-
T Consensus 129 ~~~--n-g~~~y~~WNPW~ 144 (174)
T 1cv8_A 129 KLN--N-GQEVIIIWNPWD 144 (174)
T ss_dssp EET--T-SCEEEEEECTTC
T ss_pred eec--C-CceEEEEeCCcc
Confidence 753 5 789999988774
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=90.06 E-value=0.72 Score=39.90 Aligned_cols=54 Identities=24% Similarity=0.335 Sum_probs=35.2
Q ss_pred EEcCCCCHHHHHHHHhcC-CeEEEEecC-c------cccc--CCceEeCCCCCCCCeEEEEEEeCCc
Q 044448 204 QYVQPATEEGLQDVVSRQ-PVSVAIDAT-W------FNFY--HGGVFTGPCGNTPNHGVTIVGYGTT 260 (308)
Q Consensus 204 ~~v~~~~~~~lk~~l~~g-PV~v~i~~~-~------f~~y--~~Giy~~~c~~~~~Hav~iVGyg~~ 260 (308)
..++..+.++|++.|.+| ||.|..... . |..+ .+|-..- ...+|+|+|+||+..
T Consensus 125 ~dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~---~~~~H~VVl~GYd~~ 188 (236)
T 3erv_A 125 VDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI---TYNEHCVVLIGYDQE 188 (236)
T ss_dssp EECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE---CTTEEEEEEEEECSS
T ss_pred eecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee---ccCCeEEEEEEEeCC
Confidence 345656899999999986 999877653 1 1111 1232211 236899999999763
No 50
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=39.92 E-value=55 Score=29.27 Aligned_cols=59 Identities=17% Similarity=0.237 Sum_probs=36.2
Q ss_pred HHHHHHHhc-CCeEEEEecCcccccCCceEeCCCCCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcCCCceEEEEe
Q 044448 212 EGLQDVVSR-QPVSVAIDATWFNFYHGGVFTGPCGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWDEGGSMRIFR 290 (308)
Q Consensus 212 ~~lk~~l~~-gPV~v~i~~~~f~~y~~Giy~~~c~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~ 290 (308)
+.|++.|.+ .||.+.-..... . +..++||.+|=||..+ +||-|==.||-. .+|||.+..
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~~~------~-----~~~~GHafV~DGY~~~-------~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSPGS------M-----GQDAGHAFVIDGYNKA-------GLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC------------------CCCEEEEEEEECTT-------SCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEecCCC------C-----CCCCceEEEEccccCC-------CeEEEecCCCCC--CCceEeccC
Confidence 467778885 698654321111 0 1258999999999753 478775344411 489999874
No 51
>2vwa_A Putative uncharacterized protein PF13_0012; unknown function; HET: PTY; 2.5A {Plasmodium falciparum}
Probab=34.47 E-value=6.7 Score=28.15 Aligned_cols=31 Identities=13% Similarity=0.160 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCHHHHHhh
Q 044448 32 KEMRFKIFKKNHEFLRLNKFADLTREKFLAS 62 (308)
Q Consensus 32 ~~~R~~iF~~N~~~~g~N~fsDlt~eEf~~~ 62 (308)
-.+||.+|..|.+...--+|++||.+.-.-.
T Consensus 20 piKrfN~F~Dn~rla~qhHF~~LSn~Qq~y~ 50 (101)
T 2vwa_A 20 SIKRYNNFVDIARLSIQKHFEHLSNDQKDSH 50 (101)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 3689999999999844457888887765443
No 52
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=28.39 E-value=79 Score=27.36 Aligned_cols=52 Identities=25% Similarity=0.480 Sum_probs=36.7
Q ss_pred HHHHHHHhc-CCeEEEEecCcccccCCceEeCCCCCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcC--CCceEEE
Q 044448 212 EGLQDVVSR-QPVSVAIDATWFNFYHGGVFTGPCGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWD--EGGSMRI 288 (308)
Q Consensus 212 ~~lk~~l~~-gPV~v~i~~~~f~~y~~Giy~~~c~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WG--e~Gy~~i 288 (308)
+.|++.|.+ .||.+.-.. +.+.||.+|=||..+ +|+-|= || || .+|||.+
T Consensus 172 ~~I~~eL~~grPV~~~G~~----------------~~gGHAwViDGY~~~-------~~~H~N--wG--WgG~~nGYy~l 224 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG----------------KVGGHAFVIDGADGR-------NFYHVN--WG--WGGVSDGFFRL 224 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE----------------TTEEEEEEEEEEESS-------SCEEEE--CS--STTTTCEEECT
T ss_pred HHHHHHHHcCCCEEEEeec----------------CCCceEEEEcccccC-------CEEEEE--cC--CCCCCCceeec
Confidence 567778886 699765321 257999999999643 466664 55 54 5899998
Q ss_pred Ee
Q 044448 289 FR 290 (308)
Q Consensus 289 ~~ 290 (308)
..
T Consensus 225 ~~ 226 (261)
T 4d8b_A 225 DA 226 (261)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 53
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=27.63 E-value=1.3e+02 Score=27.39 Aligned_cols=52 Identities=25% Similarity=0.470 Sum_probs=35.6
Q ss_pred HHHHHHHhc-CCeEEEEecCcccccCCceEeCCCCCCCCeEEEEEEeCCcCCCCCCCCeEEEecCCCCCcC--CCceEEE
Q 044448 212 EGLQDVVSR-QPVSVAIDATWFNFYHGGVFTGPCGNTPNHGVTIVGYGTTTEAEGQQPYWLVKNRWGTNWD--EGGSMRI 288 (308)
Q Consensus 212 ~~lk~~l~~-gPV~v~i~~~~f~~y~~Giy~~~c~~~~~Hav~iVGyg~~~~~~~g~~ywivkNSWG~~WG--e~Gy~~i 288 (308)
+.|++.|.+ .||.+.-. . ..++||.+|=||..+ +||-|= || || .+|||.+
T Consensus 290 ~~i~~eL~~~rPV~~~G~------------~----~~gGHAfV~DGy~~~-------~~~H~N--wG--WgG~~nGyy~l 342 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGV------------G----KVGGHAFVIDGADGR-------NFYHVN--WG--WGGVSDGFFRL 342 (371)
T ss_dssp HHHHHHHHTTCCEEEEEE------------E----TTEEEEEEEEEECSS-------SEEEEE--CS--STTTTCEEEES
T ss_pred HHHHHHHHcCCCEEEEee------------c----CCCceEEEECcccCC-------CeEEEE--eC--cCCCCCcceec
Confidence 456777885 69965321 0 127999999999753 477774 55 54 5899998
Q ss_pred Ee
Q 044448 289 FR 290 (308)
Q Consensus 289 ~~ 290 (308)
..
T Consensus 343 ~~ 344 (371)
T 1dki_A 343 DA 344 (371)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 54
>3lys_A Prophage PI2 protein 01, integrase; helical N-terminal domain, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactococcus lactis}
Probab=22.37 E-value=2e+02 Score=20.05 Aligned_cols=56 Identities=11% Similarity=0.172 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHH-hcCCCCCCCCHHHHHhhhc
Q 044448 8 TGNIAAKHEQWMVEFARTYKDQAEKEMRFKIFKKNHEF-LRLNKFADLTREKFLASYT 64 (308)
Q Consensus 8 ~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~iF~~N~~~-~g~N~fsDlt~eEf~~~~~ 64 (308)
+..+.+.|++|...+.+.-..+.-.......+. .+.. +|--...+++..++.+.+.
T Consensus 5 ~~Tf~~~~~~wl~~~~~~~~~~~T~~~y~~~~~-~i~p~~g~~~l~~It~~~i~~~~~ 61 (112)
T 3lys_A 5 KQEISEYFKDWMELYKKNAIDEMTYKGYEQTLK-YLKTYMPNVLISEITASSYQRALN 61 (112)
T ss_dssp CSBHHHHHHHHHHHHTTTTSCHHHHHHHHHHHH-HHHHHSSSCBTTTCCHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHccCCCCHHHHHHHHHHHH-HHHHHhCCCCHHhCCHHHHHHHHH
Confidence 356788999999988753222222111122233 3333 7877889999888876543
No 55
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=20.72 E-value=44 Score=29.83 Aligned_cols=63 Identities=11% Similarity=0.225 Sum_probs=34.2
Q ss_pred HHHHHHHHhcCCe-EEEEecCc-ccccCCceEeCCCCCCCCeEEEEEEeCCcC-CCCCCCCeEEEecCCCC
Q 044448 211 EEGLQDVVSRQPV-SVAIDATW-FNFYHGGVFTGPCGNTPNHGVTIVGYGTTT-EAEGQQPYWLVKNRWGT 278 (308)
Q Consensus 211 ~~~lk~~l~~gPV-~v~i~~~~-f~~y~~Giy~~~c~~~~~Hav~iVGyg~~~-~~~~g~~ywivkNSWG~ 278 (308)
.+.|++++..|.+ ++++.... .. .... ...+-..+||=.|++.-... ... +...-.|||=||.
T Consensus 205 ~~~l~~~~~~g~l~~~~~~~~~~~~---~~~~-~~~GLv~~HaYsVl~v~~v~~~~~-~~~lv~lrNPWg~ 270 (326)
T 2nqa_A 205 YQIIRKALCAGSLLGCSIDVYSAAE---AEAI-TSQKLVKSHAYSVTGVEEVNFQGH-PEKLIRLRNPWGE 270 (326)
T ss_dssp HHHHHHHHHTTCEEEEECCCSSGGG---TTCB-CTTSCBSSCCEEEEEEEEEEETTE-EEEEEEEECTTCC
T ss_pred HHHHHHHHhCCCceEEeecCCCccc---chhh-hccCCccCceEEEEEEEEEecCCC-ceEEEEecCCCcC
Confidence 3567777777755 34332221 10 0000 11222478999998886421 001 3467899999995
No 56
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=20.40 E-value=46 Score=29.96 Aligned_cols=63 Identities=11% Similarity=0.200 Sum_probs=34.2
Q ss_pred HHHHHHHHhcCCe-EEEEecC-cccccCCceEeCCCCCCCCeEEEEEEeCCcC-CCCCCCCeEEEecCCCC
Q 044448 211 EEGLQDVVSRQPV-SVAIDAT-WFNFYHGGVFTGPCGNTPNHGVTIVGYGTTT-EAEGQQPYWLVKNRWGT 278 (308)
Q Consensus 211 ~~~lk~~l~~gPV-~v~i~~~-~f~~y~~Giy~~~c~~~~~Hav~iVGyg~~~-~~~~g~~ywivkNSWG~ 278 (308)
.+.|++++..|.+ ++++.++ .... ... ...+-..+||=.|++.-... ... +...-.|||-||.
T Consensus 210 ~~~l~~~~~~g~l~~~s~~~t~~~~~---~~~-~~~GLv~~HaYsVl~v~~v~~~~~-~~~Lv~LrNPWg~ 275 (339)
T 2r9f_A 210 YQIILKALERGSLLGCSINISDIRDL---EAI-TFKNLVRGHAYSVTDAKQVTYQGQ-RVNLIRMRNPWGE 275 (339)
T ss_dssp HHHHHHHHHHTCEEEEECCCSSSSTT---CSB-CTTSCBTTCCEEEEEEEEEEETTE-EEEEEEEECTTSC
T ss_pred HHHHHHHHHCCCeEEEEecCCCccch---hhh-hccCCcCCceEEEeEEEEEecCCC-ceEEEEEeCCCCC
Confidence 3667777777644 4443322 1100 000 11222478999998886421 001 3567899999995
Done!