Query 044449
Match_columns 200
No_of_seqs 141 out of 1755
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 05:22:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044449.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044449hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nxu_A Cytochrome P450 3A4; al 100.0 1.1E-28 3.9E-33 192.4 13.5 154 42-200 14-168 (485)
2 3swz_A Steroid 17-alpha-hydrox 99.9 1.1E-27 3.9E-32 187.2 12.6 160 38-200 4-167 (494)
3 3pm0_A Cypib1, cytochrome P450 99.9 1.3E-27 4.6E-32 187.3 12.0 161 38-200 5-171 (507)
4 3s79_A Cytochrome P450 19A1; o 99.9 1.1E-27 3.9E-32 187.5 10.6 158 40-200 43-205 (503)
5 3k9v_A 1,25-dihydroxyvitamin D 99.9 5.2E-27 1.8E-31 182.8 11.8 162 36-200 18-189 (482)
6 2hi4_A Cytochrome P450 1A2; CY 99.9 4.3E-26 1.5E-30 178.4 14.6 161 38-200 12-182 (495)
7 3tbg_A Cytochrome P450 2D6; mo 99.9 4.9E-26 1.7E-30 177.2 14.5 158 40-200 8-170 (479)
8 3e6i_A CYPIIE1, P450-J, cytoch 99.9 6.7E-26 2.3E-30 176.3 15.2 156 39-200 7-165 (476)
9 3qz1_A Steroid 21-hydroxylase; 99.9 4.7E-27 1.6E-31 183.8 8.4 155 37-200 24-179 (496)
10 1po5_A Cytochrome P450 2B4; ox 99.9 8.9E-26 3E-30 175.8 15.4 155 41-200 9-166 (476)
11 2fdv_A Cytochrome P450 2A6; CY 99.9 1.5E-25 5.1E-30 174.6 12.9 154 42-200 10-166 (476)
12 1r9o_A Cytochrome P450 2C9; mo 99.9 1.8E-25 6.3E-30 174.1 11.3 154 42-200 11-167 (477)
13 3ld6_A Lanosterol 14-alpha dem 99.9 6.7E-26 2.3E-30 175.9 8.6 154 40-200 9-164 (461)
14 2ve3_A Putative cytochrome P45 99.9 3.4E-25 1.2E-29 171.2 11.9 154 38-200 8-161 (444)
15 3czh_A Cytochrome P450 2R1; vi 99.9 2.9E-25 9.9E-30 173.2 11.4 158 39-200 9-171 (481)
16 3gw9_A Sterol 14alpha-demethyl 99.9 2E-25 6.8E-30 172.5 10.2 154 41-200 2-158 (450)
17 2ij2_A Cytochrome P450 BM3; mo 99.9 2.5E-24 8.5E-29 167.5 14.2 154 42-200 3-159 (470)
18 3n9y_A Cholesterol SIDE-chain 99.9 1.5E-24 5.2E-29 169.2 12.0 160 37-200 4-176 (487)
19 3i3k_A Lanosterol 14-alpha dem 99.9 9.8E-25 3.4E-29 169.3 8.5 156 38-200 7-164 (461)
20 2cib_A Cytochrome P450 51; hem 99.9 4.4E-24 1.5E-28 165.5 11.4 150 42-200 4-154 (455)
21 3dbg_A Putative cytochrome P45 99.9 3.4E-24 1.2E-28 166.6 8.4 149 41-200 22-172 (467)
22 2cd8_A Cytochrome P450 monooxy 99.9 5.6E-23 1.9E-27 158.5 12.5 152 41-200 25-182 (436)
23 3v8d_A Cholesterol 7-alpha-mon 99.9 1E-23 3.5E-28 164.8 6.5 161 36-200 7-172 (491)
24 1n97_A CYP175A1; electron tran 99.9 6E-23 2E-27 156.2 5.4 143 46-200 3-146 (389)
25 1jfb_A Nitric-oxide reductase 99.9 7E-21 2.4E-25 145.4 14.0 152 43-200 2-159 (404)
26 3mdm_A Cholesterol 24-hydroxyl 99.9 8.5E-21 2.9E-25 147.0 13.7 138 60-200 9-150 (456)
27 1izo_A P450bsbeta, cytochrome 99.9 4.3E-21 1.5E-25 147.2 11.7 141 50-200 8-151 (417)
28 3awm_A Fatty acid alpha-hydrox 99.8 6.9E-21 2.4E-25 145.9 10.9 143 44-200 4-150 (415)
29 3dax_A Cytochrome P450 7A1; ch 99.8 2.9E-21 9.8E-26 150.8 8.1 159 38-200 9-172 (491)
30 3dsk_A Cytochrome P450 74A, ch 99.8 6.3E-21 2.1E-25 149.1 9.3 161 37-200 23-200 (495)
31 1ued_A P450 OXYC, P450 monooxy 99.8 5E-20 1.7E-24 140.8 12.6 146 41-200 9-166 (406)
32 2zbx_A Cytochrome P450-SU1; be 99.8 3.8E-19 1.3E-23 136.2 14.3 151 41-200 4-164 (412)
33 3b6h_A Prostacyclin synthase; 99.8 1.3E-19 4.6E-24 141.7 10.7 156 38-200 14-172 (498)
34 3dan_A Cytochrome P450 74A2; A 99.8 2E-19 6.9E-24 139.8 9.9 159 39-200 6-182 (473)
35 3ivy_A Cytochrome P450 CYP125; 99.8 7.7E-19 2.6E-23 135.3 12.9 150 42-200 18-184 (433)
36 1s1f_A Putative cytochrome P45 99.8 1.3E-18 4.5E-23 132.9 13.7 147 42-200 8-162 (406)
37 3b98_A Prostaglandin I2 syntha 99.8 6.7E-20 2.3E-24 142.6 5.8 155 38-200 14-172 (475)
38 3abb_A CYP105D6, cytochrome P4 99.8 3.4E-18 1.2E-22 130.7 12.9 135 57-200 20-163 (408)
39 2jjn_A Cytochrome P450 113A1; 99.8 2.3E-18 8E-23 131.8 10.6 143 33-200 10-153 (411)
40 3oo3_A OXY protein; cytochrome 99.8 5.8E-18 2E-22 128.4 12.5 135 59-200 10-148 (384)
41 3aba_A Cytochrome P450; oxidor 99.8 1.4E-17 4.9E-22 127.1 13.9 133 59-200 17-156 (403)
42 1cpt_A Cytochrome P450-TERP; o 99.8 3.4E-18 1.2E-22 131.5 10.5 146 42-200 6-171 (428)
43 3a4g_A Vitamin D hydroxylase; 99.7 1.5E-17 5.3E-22 127.2 12.9 132 59-200 18-155 (411)
44 2zwu_A Camphor 5-monooxygenase 99.7 5.9E-18 2E-22 129.7 10.1 151 38-200 7-169 (415)
45 3tyw_A Putative cytochrome P45 99.7 4.1E-17 1.4E-21 125.1 14.5 133 59-200 27-168 (417)
46 1odo_A Putative cytochrome P45 99.7 8.7E-18 3E-22 128.5 10.5 136 58-200 12-158 (408)
47 2y5n_A MYCG, P-450-like protei 99.7 2E-17 6.7E-22 126.9 12.1 133 59-200 35-172 (417)
48 1z8o_A 6-deoxyerythronolide B 99.7 2.5E-17 8.6E-22 125.8 11.9 132 59-200 12-158 (404)
49 2xbk_A PIMD protein; epoxidati 99.7 9.4E-17 3.2E-21 122.6 14.6 132 59-200 24-166 (404)
50 3ejb_B Biotin biosynthesis cyt 99.7 2.2E-17 7.6E-22 126.1 10.1 133 59-200 11-148 (404)
51 2wm5_A CYP124, putative cytoch 99.7 3E-17 1E-21 126.5 10.6 134 61-200 44-188 (435)
52 4fb2_A P450CIN; heme, monooxyg 99.7 1.7E-17 5.9E-22 126.4 9.0 134 58-200 16-152 (398)
53 2z36_A MOXA, cytochrome P450 t 99.7 8.9E-17 3E-21 123.1 12.8 147 42-200 7-165 (413)
54 2dkk_A Cytochrome P450; CYP158 99.7 9.8E-17 3.4E-21 122.8 12.9 132 60-200 26-165 (411)
55 2uuq_A CYP130, cytochrome P450 99.7 9.3E-17 3.2E-21 123.0 11.3 130 60-200 24-164 (414)
56 1gwi_A CYP154C1, cytochrome P4 99.7 9.7E-17 3.3E-21 122.8 10.7 134 58-200 14-161 (411)
57 3tkt_A Cytochrome P450; aromat 99.7 1E-16 3.5E-21 124.0 10.8 130 63-200 47-193 (450)
58 2xkr_A CYP142, putative cytoch 99.7 1.5E-16 5.1E-21 121.3 10.4 126 60-200 17-143 (398)
59 2z3t_A Cytochrome P450; monoxy 99.7 3.1E-16 1.1E-20 120.5 11.4 131 60-200 19-166 (425)
60 3mgx_A Putative P450 monooxyge 99.7 1E-16 3.4E-21 122.9 8.4 133 60-200 36-174 (415)
61 1q5d_A P450 epoxidase; cytochr 99.7 8.8E-17 3E-21 123.3 6.8 130 59-200 24-163 (419)
62 3nc3_A Cytochrome P450 CYPX; c 99.6 1.9E-16 6.6E-21 122.2 7.0 129 60-200 52-181 (441)
63 3r9b_A Cytochrome P450 164A2; 99.6 6.5E-16 2.2E-20 118.4 9.6 130 58-200 26-164 (418)
64 3buj_A CALO2; heme, iron, meta 99.6 6.7E-16 2.3E-20 117.6 9.1 128 60-200 12-147 (397)
65 1n40_A P450 MT2, cytochrome P4 99.6 6.7E-16 2.3E-20 117.6 7.3 129 59-200 14-151 (396)
66 3oft_A Cytochrome P450, CYP101 99.6 8.8E-16 3E-20 116.9 8.0 133 58-200 21-154 (396)
67 1lfk_A OXYB, P450 monooxygenas 99.6 1.6E-15 5.4E-20 115.6 9.3 129 64-200 16-157 (398)
68 3rwl_A Cytochrome P450 alkane 99.6 7E-15 2.4E-19 113.0 12.6 132 60-200 37-179 (426)
69 3lxh_A Cytochrome P450; heme, 99.6 1.7E-15 5.7E-20 116.3 8.7 132 60-200 37-170 (421)
70 1io7_A Cytochrome P450 CYP119; 99.6 3.5E-15 1.2E-19 112.6 10.4 124 63-200 1-135 (368)
71 3b4x_A 367AA long hypothetical 99.5 2.2E-14 7.7E-19 108.1 9.4 121 63-200 1-132 (367)
72 2rfb_A Cytochrome P450; heme, 99.5 7E-15 2.4E-19 109.9 6.5 110 72-200 2-112 (343)
73 2wiy_A XPLA-heme, cytochrome P 99.5 2.3E-14 7.7E-19 109.1 8.6 129 60-200 19-147 (394)
74 4dnj_A Putative cytochrome P45 99.5 2.2E-13 7.7E-18 104.2 8.9 143 48-198 18-167 (412)
75 3p3o_A Cytochrome P450; monoox 99.5 2.8E-14 9.6E-19 109.3 3.6 128 60-200 32-167 (416)
76 4dxy_A Cytochrome P450, CYP101 99.2 9.3E-11 3.2E-15 89.8 12.0 130 60-197 36-167 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 98.6 1.3E-10 4.5E-15 87.7 -8.9 128 44-200 36-176 (381)
78 2krb_A Eukaryotic translation 75.4 8.2 0.00028 21.3 6.8 38 64-101 21-65 (81)
79 2diu_A KIAA0430 protein; struc 75.2 3.8 0.00013 24.1 3.5 59 52-111 13-75 (96)
80 1s79_A Lupus LA protein; RRM, 66.7 17 0.00058 21.3 6.0 41 63-103 24-72 (103)
81 1iqt_A AUF1, heterogeneous nuc 62.2 16 0.00055 19.5 4.9 41 63-103 12-61 (75)
82 3v4m_A Splicing factor U2AF 65 61.7 22 0.00076 20.9 5.8 47 65-111 30-88 (105)
83 2nlw_A Eukaryotic translation 58.1 25 0.00086 20.4 6.6 53 50-102 17-80 (105)
84 3d2w_A TAR DNA-binding protein 57.7 23 0.0008 19.9 5.6 49 49-99 12-64 (89)
85 3ue2_A Poly(U)-binding-splicin 57.3 30 0.001 21.0 5.6 63 49-111 21-100 (118)
86 2pe8_A Splicing factor 45; RRM 56.8 28 0.00095 20.5 5.4 64 47-110 7-84 (105)
87 1whv_A Poly(A)-specific ribonu 56.8 28 0.00096 20.6 5.3 39 63-101 28-67 (100)
88 3s6e_A RNA-binding protein 39; 56.0 14 0.00048 22.3 3.5 67 44-110 3-83 (114)
89 3lqv_A PRE-mRNA branch site pr 55.9 29 0.00099 20.4 7.9 57 43-101 3-65 (115)
90 2a3j_A U1 small nuclear ribonu 51.7 39 0.0013 20.7 5.6 37 66-102 49-91 (127)
91 2mss_A Protein (musashi1); RNA 50.8 27 0.00092 18.6 5.0 40 63-102 12-60 (75)
92 3s7r_A Heterogeneous nuclear r 46.8 35 0.0012 18.7 4.3 51 51-103 14-73 (87)
93 2d9o_A DNAJ (HSP40) homolog, s 41.3 52 0.0018 19.2 6.6 40 63-102 30-73 (100)
94 3fgx_A Rbstp2171; structural g 40.3 22 0.00075 21.6 2.5 16 67-82 10-25 (114)
95 1nu4_A U1A RNA binding domain; 40.1 50 0.0017 18.5 5.7 37 66-102 28-70 (97)
96 3beg_B Splicing factor, argini 39.6 58 0.002 19.2 5.7 57 51-109 19-78 (115)
97 2cqc_A Arginine/serine-rich sp 37.5 54 0.0019 18.2 6.9 55 46-102 13-76 (95)
98 2jwn_A Embryonic polyadenylate 36.4 68 0.0023 19.1 5.2 45 63-107 49-102 (124)
99 2do4_A Squamous cell carcinoma 36.1 60 0.0021 18.4 4.8 50 51-102 20-77 (100)
100 2bz2_A Negative elongation fac 35.7 72 0.0025 19.1 4.5 41 62-102 49-92 (121)
101 2dgx_A KIAA0430 protein; RRM d 35.1 62 0.0021 18.2 6.1 35 67-101 30-70 (96)
102 3ctr_A Poly(A)-specific ribonu 34.8 22 0.00074 21.1 1.8 48 64-111 19-69 (101)
103 1sjq_A Polypyrimidine tract-bi 33.6 75 0.0026 18.8 7.0 55 45-101 13-70 (105)
104 4f25_A Polyadenylate-binding p 33.5 75 0.0026 18.7 5.3 49 52-102 9-64 (115)
105 2cpf_A RNA binding motif prote 33.4 66 0.0023 18.1 5.6 49 52-102 9-69 (98)
106 2p22_C Protein SRN2; endosome, 33.1 1E+02 0.0034 20.7 5.1 57 132-189 110-167 (192)
107 2cq4_A RNA binding motif prote 33.0 74 0.0025 18.5 4.2 42 63-104 38-88 (114)
108 2dh8_A DAZ-associated protein 32.9 71 0.0024 18.3 4.4 56 51-108 19-83 (105)
109 2voo_A Lupus LA protein; RNA-b 32.3 86 0.0029 20.7 4.8 42 62-103 121-170 (193)
110 2err_A Ataxin-2-binding protei 32.1 59 0.002 18.9 3.6 40 63-102 42-88 (109)
111 2dgs_A DAZ-associated protein 32.0 71 0.0024 18.0 6.0 57 51-109 13-78 (99)
112 1x4c_A Splicing factor, argini 31.9 77 0.0026 18.3 7.5 50 51-102 18-69 (108)
113 2cpi_A CCR4-NOT transcription 31.9 48 0.0017 19.4 3.2 58 51-110 18-91 (111)
114 3s8s_A Histone-lysine N-methyl 31.9 80 0.0027 18.5 5.8 50 51-102 9-67 (110)
115 1x4d_A Matrin 3; structural ge 31.6 80 0.0027 18.4 4.1 54 47-101 14-70 (102)
116 1jmt_A Splicing factor U2AF 35 31.4 80 0.0027 18.4 6.2 44 67-110 43-96 (104)
117 3ns6_A Eukaryotic translation 31.4 76 0.0026 18.1 5.9 37 65-101 27-72 (100)
118 2cjk_A Nuclear polyadenylated 31.3 94 0.0032 19.3 4.8 41 63-103 100-149 (167)
119 1sjr_A Polypyrimidine tract-bi 30.9 1.1E+02 0.0038 19.8 6.0 48 53-102 51-103 (164)
120 1p27_B RNA-binding protein 8A; 30.9 78 0.0027 18.1 6.2 40 63-102 36-84 (106)
121 2dnh_A Bruno-like 5, RNA bindi 30.7 78 0.0027 18.0 4.8 49 51-101 18-74 (105)
122 3ulh_A THO complex subunit 4; 30.4 80 0.0027 18.1 5.6 40 63-102 42-89 (107)
123 2wbr_A GW182, gawky, LD47780P; 29.8 83 0.0028 18.1 6.3 49 50-100 9-60 (89)
124 2ad9_A Polypyrimidine tract-bi 29.2 98 0.0034 18.7 6.2 53 47-101 30-85 (119)
125 2ywk_A Putative RNA-binding pr 29.1 78 0.0027 17.6 4.9 48 52-101 20-75 (95)
126 1x4f_A Matrin 3; structural ge 29.0 96 0.0033 18.5 4.4 54 47-101 24-80 (112)
127 1x4e_A RNA binding motif, sing 29.0 74 0.0025 17.2 4.9 49 51-101 8-65 (85)
128 3zzy_A Polypyrimidine tract-bi 28.9 1.1E+02 0.0036 19.0 4.8 48 52-101 32-84 (130)
129 2kxn_B Transformer-2 protein h 28.5 1E+02 0.0035 18.7 7.7 51 50-102 48-107 (129)
130 2dit_A HIV TAT specific factor 28.5 92 0.0032 18.2 4.2 45 65-109 41-91 (112)
131 1x4b_A Heterogeneous nuclear r 28.0 80 0.0027 18.5 3.7 41 63-103 40-89 (116)
132 2huj_A LIN2004 protein; hypoth 28.0 1E+02 0.0035 19.5 4.2 44 147-190 17-60 (140)
133 2dgv_A HnRNP M, heterogeneous 27.9 81 0.0028 17.3 6.2 49 52-102 12-67 (92)
134 3md1_A Nuclear and cytoplasmic 27.8 76 0.0026 17.0 5.0 39 64-102 15-62 (83)
135 1x5p_A Negative elongation fac 27.7 86 0.003 17.6 6.9 48 51-102 18-68 (97)
136 2hvz_A Splicing factor, argini 27.6 88 0.003 17.7 5.5 39 63-101 13-55 (101)
137 2rs2_A Musashi-1, RNA-binding 27.5 96 0.0033 18.0 5.0 50 52-103 29-87 (109)
138 3ex7_B RNA-binding protein 8A; 27.4 1E+02 0.0035 18.3 6.6 48 63-110 35-92 (126)
139 2dnm_A SRP46 splicing factor; 27.4 90 0.0031 17.7 4.9 57 51-109 16-82 (103)
140 3mdf_A Peptidyl-prolyl CIS-tra 27.1 80 0.0027 17.0 5.7 49 51-101 10-67 (85)
141 2cqb_A Peptidyl-prolyl CIS-tra 26.9 77 0.0026 17.9 3.4 51 50-102 14-73 (102)
142 1whw_A Hypothetical protein ri 26.6 91 0.0031 17.5 5.9 40 63-102 21-69 (99)
143 1oo0_B CG8781-PA, drosophila Y 26.3 99 0.0034 17.8 5.7 39 63-101 39-86 (110)
144 2dnr_A Synaptojanin-1; RRM dom 26.2 1E+02 0.0034 17.8 5.3 43 65-107 30-73 (91)
145 2kvi_A Nuclear polyadenylated 25.9 94 0.0032 17.4 5.9 50 52-102 14-64 (96)
146 2x1f_A MRNA 3'-END-processing 25.7 94 0.0032 17.3 5.9 39 63-101 15-62 (96)
147 1whx_A Hypothetical protein ri 25.6 1.1E+02 0.0036 17.9 5.7 48 63-110 23-74 (111)
148 2jvo_A Nucleolar protein 3; nu 25.0 1.1E+02 0.0037 17.8 4.8 40 63-102 44-84 (108)
149 2div_A TRNA selenocysteine ass 24.9 99 0.0034 17.3 4.9 51 50-102 11-71 (99)
150 2cph_A RNA binding motif prote 24.9 1E+02 0.0035 17.5 6.8 58 51-110 18-87 (107)
151 2dgu_A Heterogeneous nuclear r 24.8 1E+02 0.0035 17.5 6.1 50 51-102 14-64 (103)
152 1uaw_A Mouse-musashi-1; RNP-ty 24.7 85 0.0029 16.5 3.5 40 64-103 14-62 (77)
153 3ucg_A Polyadenylate-binding p 24.5 93 0.0032 16.9 4.8 45 63-107 19-72 (89)
154 1l3k_A Heterogeneous nuclear r 24.1 1.5E+02 0.005 19.0 5.3 56 51-108 16-80 (196)
155 1u6f_A Tcubp1, RNA-binding pro 24.1 1.3E+02 0.0043 18.3 5.7 40 63-102 55-103 (139)
156 2cq1_A PTB-like protein L; RRM 23.9 1.1E+02 0.0039 17.6 6.0 51 49-101 16-69 (101)
157 2cpj_A Non-POU domain-containi 23.8 85 0.0029 17.7 3.2 50 51-102 18-70 (99)
158 2xnq_A Nuclear polyadenylated 23.7 1.1E+02 0.0037 17.3 5.9 40 63-102 36-76 (97)
159 1p1t_A Cleavage stimulation fa 23.7 1.1E+02 0.0037 17.3 4.5 40 63-102 21-69 (104)
160 4a8x_A RNA-binding protein wit 23.2 99 0.0034 16.7 6.1 45 63-107 17-72 (88)
161 3tyt_A Heterogeneous nuclear r 23.0 1.7E+02 0.0058 19.4 5.2 50 51-101 7-60 (205)
162 1ufw_A Synaptojanin 2; RNP dom 22.9 1.2E+02 0.0042 17.7 4.3 47 64-110 38-85 (95)
163 4fxv_A ELAV-like protein 1; RN 22.8 1.1E+02 0.0039 17.3 5.4 49 52-102 23-80 (99)
164 2cqd_A RNA-binding region cont 22.8 1.2E+02 0.0042 17.6 5.6 51 51-103 20-79 (116)
165 2fy1_A RNA-binding motif prote 22.5 1.3E+02 0.0044 17.7 5.7 56 52-109 11-75 (116)
166 2khc_A Testis-specific RNP-typ 22.4 1E+02 0.0035 18.0 3.5 40 63-102 53-101 (118)
167 2la6_A RNA-binding protein FUS 22.4 1.1E+02 0.0039 17.1 6.8 49 51-101 16-81 (99)
168 2ghp_A U4/U6 snRNA-associated 22.2 1.8E+02 0.0062 20.3 5.3 58 51-110 44-108 (292)
169 2cpz_A CUG triplet repeat RNA- 22.2 1.3E+02 0.0043 17.5 4.3 50 51-102 28-86 (115)
170 3md3_A Nuclear and cytoplasmic 22.2 1.4E+02 0.005 18.3 5.4 39 63-101 13-59 (166)
171 2cqi_A Nucleolysin TIAR; RNA r 22.1 1.2E+02 0.004 17.2 6.1 49 51-101 18-73 (103)
172 4f02_A Polyadenylate-binding p 22.0 1.8E+02 0.0061 19.2 5.8 54 47-102 14-76 (213)
173 1ghh_A DINI, DNA-damage-induci 21.9 1.2E+02 0.004 17.1 3.9 38 64-101 23-68 (81)
174 1wg5_A Heterogeneous nuclear r 21.8 1.2E+02 0.0042 17.3 4.8 58 51-110 18-84 (104)
175 1b35_D CRPV, protein (cricket 21.7 54 0.0018 16.4 1.6 26 49-74 30-55 (57)
176 2xs2_A Deleted in azoospermia- 21.6 67 0.0023 18.2 2.5 39 63-101 22-68 (102)
177 2ku7_A MLL1 PHD3-CYP33 RRM chi 21.0 1.5E+02 0.005 17.9 5.8 40 63-102 76-124 (140)
178 1x4g_A Nucleolysin TIAR; struc 20.9 1.3E+02 0.0045 17.3 6.3 49 52-102 29-80 (109)
179 2d9p_A Polyadenylate-binding p 20.6 1.3E+02 0.0044 17.0 6.9 54 47-102 14-74 (103)
180 2qfj_A FBP-interacting repress 20.6 1.9E+02 0.0063 18.9 6.6 39 63-101 41-88 (216)
181 2dgo_A Cytotoxic granule-assoc 20.5 1.4E+02 0.0047 17.3 5.2 50 51-102 18-76 (115)
182 2dnq_A RNA-binding protein 4B; 20.3 1.2E+02 0.0041 16.6 5.9 49 51-101 11-60 (90)
183 2adc_A Polypyrimidine tract-bi 20.1 2.1E+02 0.007 19.2 7.1 39 63-101 48-90 (229)
No 1
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.96 E-value=1.1e-28 Score=192.41 Aligned_cols=154 Identities=24% Similarity=0.332 Sum_probs=133.5
Q ss_pred CCCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhC-CCcccCCcccccccccc
Q 044449 42 PLPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDH-DSSFYNRMVKDAIFPHQ 120 (200)
Q Consensus 42 ~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~-~~~~~~~~~~~~~~~~~ 120 (200)
+.+|||+++|++||++.+..+++.++.+++++||+++++++|+.+.++++||+++++++.++ ...|.+++......
T Consensus 14 ~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~--- 90 (485)
T 3nxu_A 14 LGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG--- 90 (485)
T ss_dssp HTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCG---
T ss_pred CCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccc---
Confidence 66899999999999999988889999999999999999999999999999999999999876 56676665432222
Q ss_pred cCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHhcC
Q 044449 121 HNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 121 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG 200 (200)
..+.++++. +|+.|+++|+++ .++|+.++++.+.+.+.++++++++.+.+...+++++|+.+.+..+++|+|+.++||
T Consensus 91 ~~~~~l~~~-~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG 168 (485)
T 3nxu_A 91 FMKSAISIA-EDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFG 168 (485)
T ss_dssp GGGGSTTTC-CHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred ccccCcccc-CCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcC
Confidence 124455444 599999999999 599999999999999999999999999765556788999999999999999999998
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.95 E-value=1.1e-27 Score=187.21 Aligned_cols=160 Identities=26% Similarity=0.391 Sum_probs=131.0
Q ss_pred CCCCCCCCCCCCccccccccccC--CCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccc
Q 044449 38 GRKKPLPPGPTPYPVIGNLLELG--EKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDA 115 (200)
Q Consensus 38 ~~~~~~~p~p~~~p~~g~~~~~~--~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~ 115 (200)
+++.+.||||+++|++||++.+. ++++..+.+|+++||+|+++++|+.++++++||+++++++.+++..|++++....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 34557899999999999999883 3578899999999999999999999999999999999999988888988876544
Q ss_pred ccccccCCcceeeccCCcchHHHHhhhhhcccch--hhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHH
Q 044449 116 IFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTT--QKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNL 193 (200)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~v 193 (200)
.......+.++++.++|+.|+++|+++ .+.|+. ..+..+.+.+.++++.+++.+.+ .+++++|+.+.+..+++|+
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~t~dv 160 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLAT--HNGQSIDISFPVFVAVTNV 160 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHH--TTTEEECCHHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHH--cCCCcccHHHHHHHHHHHH
Confidence 443443456777777799999999999 599874 45677889999999999999964 3567899999999999999
Q ss_pred HHHHhcC
Q 044449 194 LSNTIFS 200 (200)
Q Consensus 194 i~~~~fG 200 (200)
|+.++||
T Consensus 161 i~~~~fG 167 (494)
T 3swz_A 161 ISLICFN 167 (494)
T ss_dssp HHHHHHS
T ss_pred HHHHHcC
Confidence 9999997
No 3
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=187.25 Aligned_cols=161 Identities=22% Similarity=0.346 Sum_probs=116.0
Q ss_pred CCCCCCCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccccc
Q 044449 38 GRKKPLPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIF 117 (200)
Q Consensus 38 ~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~ 117 (200)
.++.+.||||+++|++||++.+.++++..+.+++++||+||++++|+.++++++||+++++|+.+++..|++++......
T Consensus 5 ~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~ 84 (507)
T 3pm0_A 5 TSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFR 84 (507)
T ss_dssp -----------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHH
T ss_pred cCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHH
Confidence 34557899999999999999998899999999999999999999999999999999999999988778888776544332
Q ss_pred ccccCCcceeeccCCcchHHHHhhhhhcccchhhHh------hhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHH
Q 044449 118 PHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLD------ANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSL 191 (200)
Q Consensus 118 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~------~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~ 191 (200)
... .+.++++..+|+.|+++|+++ .+.|+..... .+.+.+.++++++++.+.+...+++++|+.+.+..+++
T Consensus 85 ~~~-~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~ 162 (507)
T 3pm0_A 85 VVS-GGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVA 162 (507)
T ss_dssp HGG-GGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHH
T ss_pred hhc-CCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHH
Confidence 222 356676776799999999999 5877654333 38899999999999999765556778999999999999
Q ss_pred HHHHHHhcC
Q 044449 192 NLLSNTIFS 200 (200)
Q Consensus 192 ~vi~~~~fG 200 (200)
|+++.++||
T Consensus 163 dvi~~~~fG 171 (507)
T 3pm0_A 163 NVMSAVCFG 171 (507)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHcc
Confidence 999999998
No 4
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.95 E-value=1.1e-27 Score=187.53 Aligned_cols=158 Identities=16% Similarity=0.218 Sum_probs=130.2
Q ss_pred CCCCCCCCCCccccccccccC----CCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccc
Q 044449 40 KKPLPPGPTPYPVIGNLLELG----EKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDA 115 (200)
Q Consensus 40 ~~~~~p~p~~~p~~g~~~~~~----~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~ 115 (200)
+.+.||||+++|++||++.+. .+.+..+.+++++||+|+++++|+.+.++++||+++++++.+ ..|++++....
T Consensus 43 ~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~ 120 (503)
T 3s79_A 43 GTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKL 120 (503)
T ss_dssp --CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHH
T ss_pred ccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhh
Confidence 447899999999999998873 245568889999999999999999999999999999999964 35666644322
Q ss_pred c-cccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHH
Q 044449 116 I-FPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLL 194 (200)
Q Consensus 116 ~-~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi 194 (200)
. ......+.++++..+|+.|+++|+++ .++|+..+++++.+.+.++++++++.|.+..++++.+|+.+.++.+++|++
T Consensus 121 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi 199 (503)
T 3s79_A 121 GLQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTS 199 (503)
T ss_dssp HHHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHH
T ss_pred hhhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHH
Confidence 1 11223356777777799999999999 599999999999999999999999988654456678999999999999999
Q ss_pred HHHhcC
Q 044449 195 SNTIFS 200 (200)
Q Consensus 195 ~~~~fG 200 (200)
+.++||
T Consensus 200 ~~~~fG 205 (503)
T 3s79_A 200 NTLFLR 205 (503)
T ss_dssp HHHHTC
T ss_pred HHHHcC
Confidence 999998
No 5
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.94 E-value=5.2e-27 Score=182.80 Aligned_cols=162 Identities=23% Similarity=0.440 Sum_probs=132.5
Q ss_pred CCCCCCCCCCCCCCcccccccccc-----CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCC
Q 044449 36 SRGRKKPLPPGPTPYPVIGNLLEL-----GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR 110 (200)
Q Consensus 36 ~~~~~~~~~p~p~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~ 110 (200)
...++.+.+|||+++|++||++.+ .++++..+.+++++||+|+++++|+.+.|+++||+++++|+.++ ..|.++
T Consensus 18 ~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r 96 (482)
T 3k9v_A 18 GETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQR 96 (482)
T ss_dssp -CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCC
T ss_pred cccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCC
Confidence 345677889999999999999887 24678899999999999999999999999999999999999874 567776
Q ss_pred cccccc---cccccCCcceeeccCCcchHHHHhhhhhccc-chhhHhhhHHHHHHHHHHHHHHHHHHhh-CCCceeHHHH
Q 044449 111 MVKDAI---FPHQHNEFGMVLLPVSTTWKNLRKLCNLHIF-TTQKLDANQELRRKKIKNLLSYVEENCR-AGKAIDISQV 185 (200)
Q Consensus 111 ~~~~~~---~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~~d~~~~ 185 (200)
+..... ......+.++++.+ |+.|+++||.+ .+.| +.+.++.+.+.+.++++++++.+.+... +++++|+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~~-~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~ 174 (482)
T 3k9v_A 97 LEIKPWKAYRDHRNEAYGLMILE-GQEWQRVRSAF-QKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSE 174 (482)
T ss_dssp CCCHHHHHHHHHHTCCCCTTTCC-HHHHHHHHHHH-HHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHH
T ss_pred CCchHHHHHHHhcCCCCCceeCC-CchHHHHHHHh-hHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHH
Confidence 543211 11112355665554 99999999999 4875 7888999999999999999999976443 4668999999
Q ss_pred HHHHHHHHHHHHhcC
Q 044449 186 VFNTSLNLLSNTIFS 200 (200)
Q Consensus 186 ~~~~~~~vi~~~~fG 200 (200)
+..+++|+|+.++||
T Consensus 175 ~~~~t~dvi~~~~fG 189 (482)
T 3k9v_A 175 LNKWSFESICLVLYE 189 (482)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcc
Confidence 999999999999997
No 6
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.94 E-value=4.3e-26 Score=178.42 Aligned_cols=161 Identities=21% Similarity=0.338 Sum_probs=130.7
Q ss_pred CCCCCCCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccccc
Q 044449 38 GRKKPLPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIF 117 (200)
Q Consensus 38 ~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~ 117 (200)
.++.+.+|||+++|++|+++.+.++++..+.+++++||||+++++|+.++++++||+++++++.+++..|++++......
T Consensus 12 ~~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~ 91 (495)
T 2hi4_A 12 PKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTST 91 (495)
T ss_dssp CTTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHH
T ss_pred CCCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHH
Confidence 34455669999999999999887789999999999999999999999999999999999999987666787765432222
Q ss_pred ccccCCcceeec-cCCcchHHHHhhhhhcccch---hhH---h---hhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHH
Q 044449 118 PHQHNEFGMVLL-PVSTTWKNLRKLCNLHIFTT---QKL---D---ANQELRRKKIKNLLSYVEENCRAGKAIDISQVVF 187 (200)
Q Consensus 118 ~~~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~---~~l---~---~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~ 187 (200)
.. ..+.++++. ++|+.|+++|+++ .++|+. .+. + .+.+.+.++++++++.|.+...+++++|+.+.+.
T Consensus 92 ~~-~~~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~ 169 (495)
T 2hi4_A 92 LI-TDGQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVV 169 (495)
T ss_dssp TS-TTSCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHH
T ss_pred Hh-cCCCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHH
Confidence 22 124566666 4599999999999 588653 222 2 6889999999999999975445667899999999
Q ss_pred HHHHHHHHHHhcC
Q 044449 188 NTSLNLLSNTIFS 200 (200)
Q Consensus 188 ~~~~~vi~~~~fG 200 (200)
.+++|+|+.++||
T Consensus 170 ~~~~dvi~~~~fG 182 (495)
T 2hi4_A 170 VSVANVIGAMCFG 182 (495)
T ss_dssp HHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999997
No 7
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.94 E-value=4.9e-26 Score=177.20 Aligned_cols=158 Identities=19% Similarity=0.310 Sum_probs=128.2
Q ss_pred CCCCCCCCCCcccccccccc-CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccc
Q 044449 40 KKPLPPGPTPYPVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFP 118 (200)
Q Consensus 40 ~~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~ 118 (200)
+.+.||||+++|++||++++ .++++..+.+++++|||||++++|+.++|+|+||++++++|.+++..|++++.......
T Consensus 8 ~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~ 87 (479)
T 3tbg_A 8 KGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQI 87 (479)
T ss_dssp -CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGG
T ss_pred CCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHH
Confidence 34689999999999999988 57888999999999999999999999999999999999999888888888776554433
Q ss_pred cc--cCCcceeeccCCcchHHHHhhhhhcccchhhHhh--hHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHH
Q 044449 119 HQ--HNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDA--NQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLL 194 (200)
Q Consensus 119 ~~--~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi 194 (200)
.. ..+.++++..+|+.|+++|+.+ .+.|+...+.. +...+......+.+.+. ...++.+|+.+.+..+++|++
T Consensus 88 ~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~ 164 (479)
T 3tbg_A 88 LGFGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFA--NHSGRPFRPNGLLDKAVSNVI 164 (479)
T ss_dssp GTCBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHH--TTTTCCBCTHHHHHHHHHHHH
T ss_pred hccCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHH--hccCCcccHHHHHHHHHHHHH
Confidence 32 2245666777799999999999 59988776653 44555556666666554 335678999999999999999
Q ss_pred HHHhcC
Q 044449 195 SNTIFS 200 (200)
Q Consensus 195 ~~~~fG 200 (200)
+.++||
T Consensus 165 ~~~~fg 170 (479)
T 3tbg_A 165 ASLTCG 170 (479)
T ss_dssp HHHHHS
T ss_pred HHhhcC
Confidence 999987
No 8
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.94 E-value=6.7e-26 Score=176.33 Aligned_cols=156 Identities=28% Similarity=0.501 Sum_probs=128.1
Q ss_pred CCCCCCCCCCCcccccccccc-CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccccc
Q 044449 39 RKKPLPPGPTPYPVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIF 117 (200)
Q Consensus 39 ~~~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~ 117 (200)
++.+.||||+++|++||++.+ ..+++..+.+++++||+|+++++|+.+.++++||+++++++.++...|++++......
T Consensus 7 ~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~ 86 (476)
T 3e6i_A 7 SKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFH 86 (476)
T ss_dssp ---CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGG
T ss_pred CCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhh
Confidence 445789999999999999998 5788999999999999999999999999999999999999998877888776544333
Q ss_pred ccccCCcceeeccCCcchHHHHhhhhhcccchhhH--hhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHH
Q 044449 118 PHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKL--DANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLS 195 (200)
Q Consensus 118 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~ 195 (200)
... +.++++.+ |+.|+++|++. .+.|+...+ ..+.+.+.++++++++.|.+ ..++++|+.+.+..+++|+|+
T Consensus 87 ~~~--~~~l~~~~-g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~~d~~~~~~~~~~dvi~ 160 (476)
T 3e6i_A 87 AHR--DRGIIFNN-GPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRK--TQGQPFDPTFLIGCAPCNVIA 160 (476)
T ss_dssp GGT--TSSSTTCC-STTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHT--TTTSCBCTHHHHTHHHHHHHH
T ss_pred eec--CCCEEecC-CcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHH--hCCCCcChHHHHHHHHHHHHH
Confidence 332 23555555 99999999998 488776544 34678899999999999963 246789999999999999999
Q ss_pred HHhcC
Q 044449 196 NTIFS 200 (200)
Q Consensus 196 ~~~fG 200 (200)
.++||
T Consensus 161 ~~~fG 165 (476)
T 3e6i_A 161 DILFR 165 (476)
T ss_dssp HHHHS
T ss_pred HHHcC
Confidence 99997
No 9
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.94 E-value=4.7e-27 Score=183.77 Aligned_cols=155 Identities=18% Similarity=0.180 Sum_probs=124.4
Q ss_pred CCCCCCCCCCCCCcccccccccc-CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccc
Q 044449 37 RGRKKPLPPGPTPYPVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDA 115 (200)
Q Consensus 37 ~~~~~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~ 115 (200)
..++.+.||||++ ++++ .++++..+.+++++||||+++++|+.+.++++||+++++++.+++..|++++....
T Consensus 24 ~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~ 97 (496)
T 3qz1_A 24 KLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPS 97 (496)
T ss_dssp -----CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTT
T ss_pred hccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcch
Confidence 4455678899986 3444 67899999999999999999999999999999999999999888778888765543
Q ss_pred ccccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHH
Q 044449 116 IFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLS 195 (200)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~ 195 (200)
.........++++.++|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.+.+ .+++++|+.+.+..+++|+|+
T Consensus 98 ~~~~~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~dvi~ 174 (496)
T 3qz1_A 98 YKLVSQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRV--QAGAPVTIQKEFSLLTCSIIC 174 (496)
T ss_dssp TTTSCTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHT--TCSCCCHHHHHHTHHHHHHTT
T ss_pred HHHhcCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHh--cCCCccCHHHHHHHHHHHHHH
Confidence 332222223666665599999999999 59999777778999999999999999974 356789999999999999999
Q ss_pred HHhcC
Q 044449 196 NTIFS 200 (200)
Q Consensus 196 ~~~fG 200 (200)
.++||
T Consensus 175 ~~~fG 179 (496)
T 3qz1_A 175 YLTFG 179 (496)
T ss_dssp TTSTT
T ss_pred HHhcC
Confidence 99998
No 10
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.94 E-value=8.9e-26 Score=175.84 Aligned_cols=155 Identities=23% Similarity=0.464 Sum_probs=129.7
Q ss_pred CCCCCCCCCcccccccccc-CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccccccc
Q 044449 41 KPLPPGPTPYPVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPH 119 (200)
Q Consensus 41 ~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~ 119 (200)
.+.||||+++|++|+++.+ .++++..+.+++++|||++++++|+.+.++++||+++++|+.++...|++++........
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 1po5_A 9 GKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPI 88 (476)
T ss_dssp CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSC
T ss_pred CCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhh
Confidence 3678999999999999998 678899999999999999999999999999999999999997766677765543222222
Q ss_pred ccCCcceeeccCCcchHHHHhhhhhcccchh--hHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHH
Q 044449 120 QHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQ--KLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNT 197 (200)
Q Consensus 120 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~ 197 (200)
. .+.++++. +|+.|+++|+++ .+.|+.. ..+.+.+.+.++++++++.|.+. .++++|+.+.+..+++|+|+++
T Consensus 89 ~-~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~ 163 (476)
T 1po5_A 89 F-QGYGVIFA-NGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKS--KGALLDNTLLFHSITSNIICSI 163 (476)
T ss_dssp C-SSCCCCCS-SHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHH
T ss_pred c-CCCceEec-CCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHHHHHHH
Confidence 1 24566666 599999999999 5999887 45778899999999999999642 4568999999999999999999
Q ss_pred hcC
Q 044449 198 IFS 200 (200)
Q Consensus 198 ~fG 200 (200)
+||
T Consensus 164 ~fG 166 (476)
T 1po5_A 164 VFG 166 (476)
T ss_dssp HHS
T ss_pred HcC
Confidence 998
No 11
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.93 E-value=1.5e-25 Score=174.60 Aligned_cols=154 Identities=27% Similarity=0.427 Sum_probs=128.9
Q ss_pred CCCCCCCCcccccccccc-CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccc
Q 044449 42 PLPPGPTPYPVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQ 120 (200)
Q Consensus 42 ~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~ 120 (200)
+.||||+++|++|+++.+ .++++..+.+++++||||+++++++.+.++++||+++++|+.++...|++++.........
T Consensus 10 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~ 89 (476)
T 2fdv_A 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF 89 (476)
T ss_dssp BCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHHH
T ss_pred CCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhhc
Confidence 578999999999999998 5778999999999999999999999999999999999999976666777654332221111
Q ss_pred cCCcceeeccCCcchHHHHhhhhhcccchhhH--hhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHh
Q 044449 121 HNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKL--DANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTI 198 (200)
Q Consensus 121 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~ 198 (200)
.+.++++. +|+.|+++|+++ .++|+...+ +.+.+.+.++++++++.|.+ .+++++|+.+.+..+++|+|++++
T Consensus 90 -~~~~l~~~-~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~~ 164 (476)
T 2fdv_A 90 -KGYGVVFS-NGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRG--TGGANIDPTFFLSRTVSNVISSIV 164 (476)
T ss_dssp -TTCSSSSC-CHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHH--TTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred -CCCCeEec-CchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHh--cCCCccChHHHHHHHHHHHHHHHH
Confidence 24566665 499999999999 599988766 77899999999999999964 245689999999999999999999
Q ss_pred cC
Q 044449 199 FS 200 (200)
Q Consensus 199 fG 200 (200)
||
T Consensus 165 fG 166 (476)
T 2fdv_A 165 FG 166 (476)
T ss_dssp HS
T ss_pred cC
Confidence 98
No 12
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.93 E-value=1.8e-25 Score=174.09 Aligned_cols=154 Identities=27% Similarity=0.462 Sum_probs=122.6
Q ss_pred CCCCCCCCcccccccccc-CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccc
Q 044449 42 PLPPGPTPYPVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQ 120 (200)
Q Consensus 42 ~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~ 120 (200)
+.||||+++|++|+++.+ .++++..+.+++++||+|+++++++.+.++++||+++++|+.++...|++++........
T Consensus 11 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~- 89 (477)
T 1r9o_A 11 KLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERA- 89 (477)
T ss_dssp BCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTT-
T ss_pred CCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhc-
Confidence 578999999999999988 467889999999999999999998889999999999999997666677765533222222
Q ss_pred cCCcceeeccCCcchHHHHhhhhhcccchh--hHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHh
Q 044449 121 HNEFGMVLLPVSTTWKNLRKLCNLHIFTTQ--KLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTI 198 (200)
Q Consensus 121 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~ 198 (200)
..+.++++. +|+.|+++|+++ .+.|+.. .++.+.+.+.++++++++.|.+ ..++++|+.+.+..+++|+|++++
T Consensus 90 ~~~~~l~~~-~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~vi~~~~ 165 (477)
T 1r9o_A 90 NRGFGIVFS-NGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRK--TKASPCDPTFILGCAPCNVICSII 165 (477)
T ss_dssp TCTTSSTTC-CHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHT--TTTSCBCTHHHHHHHHHHHHHHHH
T ss_pred cCCCceEec-CChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHh--cCCCccChHHHHHHHHHHHHHHHH
Confidence 124566555 599999999999 5999887 4567889999999999999963 235679999999999999999999
Q ss_pred cC
Q 044449 199 FS 200 (200)
Q Consensus 199 fG 200 (200)
||
T Consensus 166 fG 167 (477)
T 1r9o_A 166 FH 167 (477)
T ss_dssp HS
T ss_pred cc
Confidence 97
No 13
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.93 E-value=6.7e-26 Score=175.89 Aligned_cols=154 Identities=14% Similarity=0.204 Sum_probs=132.0
Q ss_pred CCCCCCCCC-CccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccc-c
Q 044449 40 KKPLPPGPT-PYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAI-F 117 (200)
Q Consensus 40 ~~~~~p~p~-~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~-~ 117 (200)
+.+.||+|+ ++|++||++.+.++++.++.++++||||||++++++++.|+++||+++++++.+++..|++++..... .
T Consensus 9 g~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~ 88 (461)
T 3ld6_A 9 GVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT 88 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred CCCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh
Confidence 346678877 49999999999889999999999999999999999999999999999999999887778776543222 1
Q ss_pred ccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHH
Q 044449 118 PHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNT 197 (200)
Q Consensus 118 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~ 197 (200)
.. .|.++++..+|+.|+++|+++ .++|+.++++++.+.+.++++++++.|. .+..+|+.+.+..+++++++.+
T Consensus 89 ~~--~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~ 161 (461)
T 3ld6_A 89 PV--FGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWG----ESGEKNVFEALSELIILTASHC 161 (461)
T ss_dssp HH--HCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGC----SEEEEEHHHHHHHHHHHHHHHH
T ss_pred cc--CCCccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHh----hcCCccHHHHHHHHHHHHHHHH
Confidence 12 256777777799999999999 5999999999999999999999988885 4567899999999999999999
Q ss_pred hcC
Q 044449 198 IFS 200 (200)
Q Consensus 198 ~fG 200 (200)
+||
T Consensus 162 ~fG 164 (461)
T 3ld6_A 162 LHG 164 (461)
T ss_dssp HTC
T ss_pred HcC
Confidence 998
No 14
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.92 E-value=3.4e-25 Score=171.17 Aligned_cols=154 Identities=13% Similarity=0.199 Sum_probs=125.6
Q ss_pred CCCCCCCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccccc
Q 044449 38 GRKKPLPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIF 117 (200)
Q Consensus 38 ~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~ 117 (200)
.++.+.||||+++|++|+++.+..+++ ++.+++++||++++++++|.+.++++||+++++++.+++..|+.+... ...
T Consensus 8 ~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~-~~~ 85 (444)
T 2ve3_A 8 LNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPL-STR 85 (444)
T ss_dssp -CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCH-HHH
T ss_pred CCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhH-HHH
Confidence 445578999999999999988855666 788999999999999988889999999999999998765556532211 111
Q ss_pred ccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHH
Q 044449 118 PHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNT 197 (200)
Q Consensus 118 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~ 197 (200)
... +..++++ .+|+.|+++|+++ .++|++++++.+.+.+.++++++++.|. +++++|+.+.+..+++|+++++
T Consensus 86 ~~~-g~~~l~~-~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~----~~~~vd~~~~~~~~~~~vi~~~ 158 (444)
T 2ve3_A 86 ILL-GPNALAT-QMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWG----KANEVIWYPQLRRMTFDVAATL 158 (444)
T ss_dssp HHH-CTTSGGG-CCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHH----HSSEEEHHHHHHHHHHHHHHHH
T ss_pred HHh-Ccccccc-CCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhc----CCCcEeHHHHHHHHHHHHHHHH
Confidence 111 1225544 4599999999999 5999999999999999999999999995 3568999999999999999999
Q ss_pred hcC
Q 044449 198 IFS 200 (200)
Q Consensus 198 ~fG 200 (200)
+||
T Consensus 159 ~fG 161 (444)
T 2ve3_A 159 FMG 161 (444)
T ss_dssp HTC
T ss_pred HcC
Confidence 998
No 15
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.92 E-value=2.9e-25 Score=173.20 Aligned_cols=158 Identities=25% Similarity=0.417 Sum_probs=127.4
Q ss_pred CCCCCCCCCCCccccccccccCCC---chHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccc
Q 044449 39 RKKPLPPGPTPYPVIGNLLELGEK---PHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDA 115 (200)
Q Consensus 39 ~~~~~~p~p~~~p~~g~~~~~~~~---~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~ 115 (200)
++.+.||||+++|++|+++.+..+ ++..+.+++++||||+++++++.+.++++||+++++++.+++..|++++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 345678999999999999887333 78999999999999999999999999999999999999877667877654322
Q ss_pred ccccccCCcceeeccCCcchHHHHhhhhhcccchhhH--hhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHH
Q 044449 116 IFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKL--DANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNL 193 (200)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~v 193 (200)
..... .+.++++..+|+.|+++|+++ .++|+...+ ..+.+.+.++++++++.+.+ .+++++|+.+.+..+++|+
T Consensus 89 ~~~~~-~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~~d~~~~~~~~~~~v 164 (481)
T 3czh_A 89 FMKMT-KMGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIET--YKGRPFDFKQLITNAVSNI 164 (481)
T ss_dssp HHHHH-TTCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHT--TTTCCBCCHHHHHHHHHHH
T ss_pred HHhhc-CCCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHH--cCCCCcCHHHHHHHHHHHH
Confidence 22221 133555556699999999999 599987654 56889999999999999963 2456799999999999999
Q ss_pred HHHHhcC
Q 044449 194 LSNTIFS 200 (200)
Q Consensus 194 i~~~~fG 200 (200)
|+.++||
T Consensus 165 i~~~~fG 171 (481)
T 3czh_A 165 TNLIIFG 171 (481)
T ss_dssp HHHHHHS
T ss_pred HHHHHcC
Confidence 9999998
No 16
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.92 E-value=2e-25 Score=172.50 Aligned_cols=154 Identities=12% Similarity=0.214 Sum_probs=131.1
Q ss_pred CCCCCCCC-CccccccccccCCCchHHHHHHHHHhC-CeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccc
Q 044449 41 KPLPPGPT-PYPVIGNLLELGEKPHKSLAELAKIYG-PILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFP 118 (200)
Q Consensus 41 ~~~~p~p~-~~p~~g~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~ 118 (200)
.+.||||+ ++|++||++.+..+++.++.+++++|| ++|++++++.+.++++||+++++++.++...|++++.......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 36788855 599999999997789999999999999 9999999999999999999999999887777877654333222
Q ss_pred cccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHH-HHHHHhhCCCceeHHHHHHHHHHHHHHHH
Q 044449 119 HQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLS-YVEENCRAGKAIDISQVVFNTSLNLLSNT 197 (200)
Q Consensus 119 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~-~l~~~~~~~~~~d~~~~~~~~~~~vi~~~ 197 (200)
.. |.++++..+|+.|+++|+++ .++|+.++++.+.+.+.++++++++ .|.+ .++.+|+.+.+..+++++++.+
T Consensus 82 ~~--g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~---~~~~vd~~~~~~~~~~~~i~~~ 155 (450)
T 3gw9_A 82 VF--GEGVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWDK---DEGEINLLEDCSTMIINTACQC 155 (450)
T ss_dssp HH--CTTSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSCS---SEEEEEHHHHHHHHHHHHHHHH
T ss_pred Hh--cCCcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHHHHHHH
Confidence 22 55666665699999999999 5999999999999999999999998 6632 4457999999999999999999
Q ss_pred hcC
Q 044449 198 IFS 200 (200)
Q Consensus 198 ~fG 200 (200)
+||
T Consensus 156 ~fG 158 (450)
T 3gw9_A 156 LFG 158 (450)
T ss_dssp HSC
T ss_pred HcC
Confidence 998
No 17
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.92 E-value=2.5e-24 Score=167.48 Aligned_cols=154 Identities=19% Similarity=0.254 Sum_probs=125.2
Q ss_pred CCCCCCCCcccccccccc-CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccccccc-
Q 044449 42 PLPPGPTPYPVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPH- 119 (200)
Q Consensus 42 ~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~- 119 (200)
+.+|||+++|++||++.+ .++++..+.+++++||||+++++++.+.++++||+++++++.+ ..|.+... ......
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~-~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNLS-QALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCT--TTEEECCC-HHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhh--cCcCcCch-hHHHHHH
Confidence 568999999999999988 4578889999999999999999999999999999999999954 23533221 111111
Q ss_pred ccCCcceeec-cCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHh
Q 044449 120 QHNEFGMVLL-PVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTI 198 (200)
Q Consensus 120 ~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~ 198 (200)
...+.++++. .+|+.|+++|+++ .++|+.++++.+.+.+.++++++++.|.+. .+++++|+.+.+..+++|+|+.++
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~ 157 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCG 157 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEHHHHHHHHHHHHHHHHH
Confidence 1124556555 4699999999999 599999999999999999999999999642 235679999999999999999999
Q ss_pred cC
Q 044449 199 FS 200 (200)
Q Consensus 199 fG 200 (200)
||
T Consensus 158 fG 159 (470)
T 2ij2_A 158 FN 159 (470)
T ss_dssp HS
T ss_pred cC
Confidence 87
No 18
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.92 E-value=1.5e-24 Score=169.21 Aligned_cols=160 Identities=21% Similarity=0.272 Sum_probs=127.8
Q ss_pred CCCCCCCCCCCCCcccccccccc-----CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCc
Q 044449 37 RGRKKPLPPGPTPYPVIGNLLEL-----GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRM 111 (200)
Q Consensus 37 ~~~~~~~~p~p~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~ 111 (200)
..++.+.+|||+..++. +++.+ ..+++..+.+++++||||+++++|+.+.|+++||+++++|+.++ ..|++++
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~ 81 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERF 81 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCC
Confidence 45667889999987775 66655 23677889999999999999999999999999999999999765 4677765
Q ss_pred cccccc---ccccCCcceeeccCCcchHHHHhhhhhc-ccchhhHhhhHHHHHHHHHHHHHHHHHHh----hCCCceeHH
Q 044449 112 VKDAIF---PHQHNEFGMVLLPVSTTWKNLRKLCNLH-IFTTQKLDANQELRRKKIKNLLSYVEENC----RAGKAIDIS 183 (200)
Q Consensus 112 ~~~~~~---~~~~~~~~~~~~~~g~~w~~~R~~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~l~~~~----~~~~~~d~~ 183 (200)
....+. .....+.+++. .+|+.|+++|+++ .+ +|+.++++.+.+.+.++++++++.|.+.. +++.++|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~-~~g~~w~~~Rr~l-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~ 159 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIGVLL-KKSAAWKKDRVAL-NQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDIS 159 (487)
T ss_dssp CCHHHHHHHHHTTCCCCGGG-CCHHHHHHHHHHH-HHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCH
T ss_pred CCcHHHHHHHHccccCCCcc-CCcHHHHHHHHhc-CcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHH
Confidence 433211 11122445544 4599999999999 48 59999999999999999999999996432 234579999
Q ss_pred HHHHHHHHHHHHHHhcC
Q 044449 184 QVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 184 ~~~~~~~~~vi~~~~fG 200 (200)
+.+..+++|+|+.++||
T Consensus 160 ~~~~~~t~dvi~~~~fG 176 (487)
T 3n9y_A 160 DDLFRFAFESITNVIFG 176 (487)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999998
No 19
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.91 E-value=9.8e-25 Score=169.28 Aligned_cols=156 Identities=13% Similarity=0.194 Sum_probs=129.6
Q ss_pred CCCCCCCCC-CCCccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccc-c
Q 044449 38 GRKKPLPPG-PTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKD-A 115 (200)
Q Consensus 38 ~~~~~~~p~-p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~-~ 115 (200)
.++.+.||| |+++|++||++.+..+++.++.+++++||+|+++++++++.+++++|+.+++++.++...+.++.... .
T Consensus 7 ~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3i3k_A 7 PAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp ---CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence 345578999 88999999999998889999999999999999999999999999999999999987766665543211 1
Q ss_pred ccccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHH
Q 044449 116 IFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLS 195 (200)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~ 195 (200)
.... .|.++.+..+|+.|+++|+++ .+.|+.++++.+.+.+.++++++++.|. .+..+|+.+.+..+++++++
T Consensus 87 ~~~~--~g~g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~~~ 159 (461)
T 3i3k_A 87 TTPV--FGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWG----ESGEKNVFEALSELIILTAS 159 (461)
T ss_dssp HHHH--HCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGC----SEEEEEHHHHHHHHHHHHHH
T ss_pred hhhh--cCCeeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhh----hcCCcCHHHHHHHHHHHHHH
Confidence 1111 256666666699999999999 5999999999999999999999998885 34468999999999999999
Q ss_pred HHhcC
Q 044449 196 NTIFS 200 (200)
Q Consensus 196 ~~~fG 200 (200)
.++||
T Consensus 160 ~~~~G 164 (461)
T 3i3k_A 160 HCLHG 164 (461)
T ss_dssp HHHTC
T ss_pred HHHcc
Confidence 99987
No 20
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.91 E-value=4.4e-24 Score=165.46 Aligned_cols=150 Identities=11% Similarity=0.154 Sum_probs=109.9
Q ss_pred CCCCC-CCCccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccc
Q 044449 42 PLPPG-PTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQ 120 (200)
Q Consensus 42 ~~~p~-p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~ 120 (200)
+.||| |+++|++||++.+..+++..+.+++++||+++++++++.++++++||+++++++.++...|++++.........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 56787 88899999999988889999999999999999999999999999999999999987666677664322111111
Q ss_pred cCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHhcC
Q 044449 121 HNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 121 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG 200 (200)
+.++ +. +|+.|+++|+++ .++|+.++++.+.+.+.++++++++.|. .++++|+.+.+..+++|+++.++||
T Consensus 84 --g~~~-~~-~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~----~~~~vd~~~~~~~~~~~vi~~~~fG 154 (455)
T 2cib_A 84 --GEGV-VF-DASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWG----EAGEIDLLDFFAELTIYTSSACLIG 154 (455)
T ss_dssp --C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCC----SEEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred --CCcc-cc-CcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhC----CCCcEeHHHHHHHHHHHHHHHHHcC
Confidence 3343 34 499999999999 5999999999999999999999998874 2457999999999999999999998
No 21
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.90 E-value=3.4e-24 Score=166.57 Aligned_cols=149 Identities=14% Similarity=0.236 Sum_probs=111.2
Q ss_pred CCCCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcc-cCCccccccccc
Q 044449 41 KPLPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSF-YNRMVKDAIFPH 119 (200)
Q Consensus 41 ~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~-~~~~~~~~~~~~ 119 (200)
..+||||+++|++||++.+..+++.++.++++ ||||+++++++.+.++++||+++++++.++ .| .+.+........
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~ 98 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL 98 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-------------
T ss_pred CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh
Confidence 35688999999999999997889999999988 999999999999999999999999999865 45 332221111111
Q ss_pred ccCC-cceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHh
Q 044449 120 QHNE-FGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTI 198 (200)
Q Consensus 120 ~~~~-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~ 198 (200)
.+ .+++.. +|+.|+++|+++ .++|+.++++.+.+.+.++++++++.|. +++++|+.+.+..+++++++.++
T Consensus 99 --~g~~~l~~~-dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~vi~~~~ 170 (467)
T 3dbg_A 99 --LGKEGVATA-NGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQ----PGKTVDATSESFRVAVRVAARCL 170 (467)
T ss_dssp --------------------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSC----TTSCEEHHHHHHHHHHHHHHHHH
T ss_pred --cCCCCcccC-CcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhc----cCCcCcHHHHHHHHHHHHHHHHH
Confidence 23 455444 599999999999 5999999999999999999999999985 46789999999999999999999
Q ss_pred cC
Q 044449 199 FS 200 (200)
Q Consensus 199 fG 200 (200)
||
T Consensus 171 ~g 172 (467)
T 3dbg_A 171 LR 172 (467)
T ss_dssp SC
T ss_pred hC
Confidence 87
No 22
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.89 E-value=5.6e-23 Score=158.47 Aligned_cols=152 Identities=15% Similarity=0.213 Sum_probs=115.1
Q ss_pred CCCCCCCCCcccccccc-ccCCCchHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccc
Q 044449 41 KPLPPGPTPYPVIGNLL-ELGEKPHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFP 118 (200)
Q Consensus 41 ~~~~p~p~~~p~~g~~~-~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~ 118 (200)
.+.+|||+++|++|++. .+..+++..+.++ ++||||+++++ ++.+.++++||+++++++.++ .|++++.......
T Consensus 25 ~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~ 101 (436)
T 2cd8_A 25 QQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPL 101 (436)
T ss_dssp ---------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCC
T ss_pred ccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccccc
Confidence 46789999999999986 4567899999999 99999999998 678899999999999999865 5776653211111
Q ss_pred c---ccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHH
Q 044449 119 H---QHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLL 194 (200)
Q Consensus 119 ~---~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi 194 (200)
. ...+.++++ .+|+.|+++|+++ .++|+.++++.+.+.+.++++++++.|.+ ..++++|+.+.+ ..+++|+|
T Consensus 102 ~~~~~~~~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~vi 177 (436)
T 2cd8_A 102 TEAEAALNHNMLE-SDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLA--APDGRADLMESLAWPLPITVI 177 (436)
T ss_dssp CTTGGGTCCSGGG-CCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHT--CTTSCEEHHHHTTTHHHHHHH
T ss_pred ccccccccccccc-cCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCcchHHHHHHHHHHHHH
Confidence 0 112445544 4599999999999 59999999999999999999999999963 235689999876 57999999
Q ss_pred HHHhcC
Q 044449 195 SNTIFS 200 (200)
Q Consensus 195 ~~~~fG 200 (200)
+. +||
T Consensus 178 ~~-~~G 182 (436)
T 2cd8_A 178 SE-LLG 182 (436)
T ss_dssp HH-HHT
T ss_pred HH-HhC
Confidence 97 576
No 23
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.89 E-value=1e-23 Score=164.77 Aligned_cols=161 Identities=14% Similarity=0.123 Sum_probs=127.5
Q ss_pred CCCCCCCCCCCCCC-ccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCC-cccCCccc
Q 044449 36 SRGRKKPLPPGPTP-YPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDS-SFYNRMVK 113 (200)
Q Consensus 36 ~~~~~~~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~-~~~~~~~~ 113 (200)
.++++.+.||||++ +|++||++.+..+++.++.+++++||||+++++++.++++++||+++++++.++.. .+..++..
T Consensus 7 ~~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~ 86 (491)
T 3v8d_A 7 SRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA 86 (491)
T ss_dssp CCCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHH
T ss_pred hhccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHH
Confidence 34455678999998 69999999999999999999999999999999999999999999999999965431 22222211
Q ss_pred ccccccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhh---CCCceeHHHHHHHHH
Q 044449 114 DAIFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCR---AGKAIDISQVVFNTS 190 (200)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~---~~~~~d~~~~~~~~~ 190 (200)
...... +.+.+...+|+.|+++|+.+ .++|++++++.+.+.+.++++++++.+..... .+...|+.+++..++
T Consensus 87 ~~~~~~---g~~~~~~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~ 162 (491)
T 3v8d_A 87 LSAKAF---GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM 162 (491)
T ss_dssp HHHHHH---TCCCCCGGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHH
T ss_pred HHHHhc---CCcccccccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHH
Confidence 111112 33444444599999999999 59999999999999999999999886521111 345689999999999
Q ss_pred HHHHHHHhcC
Q 044449 191 LNLLSNTIFS 200 (200)
Q Consensus 191 ~~vi~~~~fG 200 (200)
+++++.++||
T Consensus 163 ~~~~~~~~fG 172 (491)
T 3v8d_A 163 FEAGYLTIFG 172 (491)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHcC
Confidence 9999999987
No 24
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.87 E-value=6e-23 Score=156.17 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=120.6
Q ss_pred CCCCccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCc-ccccccccccCCc
Q 044449 46 GPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRM-VKDAIFPHQHNEF 124 (200)
Q Consensus 46 ~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~-~~~~~~~~~~~~~ 124 (200)
++..+|++||++.+..+++.++.+++++|||+++ ++++.+.++++||+++++++.++ .|++++ ......... +.
T Consensus 3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g~ 77 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--GR 77 (389)
T ss_dssp ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--CS
T ss_pred ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--CC
Confidence 4556899999998877899999999999999999 89888999999999999999865 677765 211111121 45
Q ss_pred ceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHhcC
Q 044449 125 GMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 125 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG 200 (200)
++++. +|+.|+++|+++ .++|++++++.+.+.+.++++++++.|. ++++|+.+.+..+++|+++.++||
T Consensus 78 ~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~fG 146 (389)
T 1n97_A 78 GLLTD-WGESWKEARKAL-KDPFLPKNVRGYREAMEEEARAFFGEWR-----GEERDLDHEMLALSLRLLGRALFG 146 (389)
T ss_dssp STTTC-CHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred ccccC-CcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHcC
Confidence 55554 599999999999 5999999999999999999999998884 568999999999999999999998
No 25
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.86 E-value=7e-21 Score=145.44 Aligned_cols=152 Identities=14% Similarity=0.159 Sum_probs=114.3
Q ss_pred CCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEeec-CeeEEEeCCHHHHHHHHHhCC-CcccCCcccccccc--
Q 044449 43 LPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG-EVTTVVVSSAPMAKYILQDHD-SSFYNRMVKDAIFP-- 118 (200)
Q Consensus 43 ~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~v~v~~p~~~~~il~~~~-~~~~~~~~~~~~~~-- 118 (200)
.||||+++|++|++.. +++..+.+++ +||||+++.++ |.+.+++++++.+++++.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 4899999999999764 8999999995 69999998874 566778999999999998652 22333332211110
Q ss_pred --cccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHH
Q 044449 119 --HQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSN 196 (200)
Q Consensus 119 --~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~ 196 (200)
....+.++++ .+|+.|+++|+++ .++|+.++++.+.+.+.++++++++.|.+...+++++|+.+.+...+.++++.
T Consensus 78 ~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~ 155 (404)
T 1jfb_A 78 KQAAKAKPTFVD-MDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIY 155 (404)
T ss_dssp HHHTTSCCCGGG-CCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHH
T ss_pred cchhcccCcccc-cCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHH
Confidence 0111234444 4599999999999 59999999999999999999999999975444456899999999999999998
Q ss_pred HhcC
Q 044449 197 TIFS 200 (200)
Q Consensus 197 ~~fG 200 (200)
.+||
T Consensus 156 ~~~G 159 (404)
T 1jfb_A 156 TLLG 159 (404)
T ss_dssp HHHT
T ss_pred HHcC
Confidence 8887
No 26
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.85 E-value=8.5e-21 Score=146.95 Aligned_cols=138 Identities=18% Similarity=0.272 Sum_probs=113.4
Q ss_pred CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccc--cccc--ccCCcceeeccCCcch
Q 044449 60 GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDA--IFPH--QHNEFGMVLLPVSTTW 135 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~g~~w 135 (200)
++.++..+.+|+++||||+++++++.+.|+++||+++++++.+ ..|.+++.... .... ...+.++++..+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 3567888999999999999999999999999999999999964 34444432111 0011 1125566666679999
Q ss_pred HHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHhcC
Q 044449 136 KNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 136 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG 200 (200)
+++|+++ +++|+.++++.+.+.+.++++++++.+.+..++++++|+.+.+..+++|+++.++||
T Consensus 87 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG 150 (456)
T 3mdm_A 87 HKQRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFG 150 (456)
T ss_dssp HHHHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcC
Confidence 9999999 599999999999999999999999999765556678999999999999999999998
No 27
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.85 E-value=4.3e-21 Score=147.18 Aligned_cols=141 Identities=12% Similarity=0.043 Sum_probs=113.4
Q ss_pred ccccccccccCCCchHHHHHHHHHhC-CeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccc--cccccccCCcce
Q 044449 50 YPVIGNLLELGEKPHKSLAELAKIYG-PILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKD--AIFPHQHNEFGM 126 (200)
Q Consensus 50 ~p~~g~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~--~~~~~~~~~~~~ 126 (200)
.|++|++..+..+++.++.+++++|| ||+++..++.+.++++||++++.++ + ...|++..... ..... .|.+.
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~--~g~~~ 83 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-D-TDRFQRQNALPKRVQKSL--FGVNA 83 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-C-TTTEECTTCSCHHHHTTT--TCTTC
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-c-ccccccccccccchhhhh--ccccc
Confidence 38999999987789999999999998 9999998889999999999998654 3 23455432211 11111 13333
Q ss_pred eeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHhcC
Q 044449 127 VLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 127 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG 200 (200)
++..+|+.|+++|+++ .++|++++++.+.+.+.+.++++++.|. .++++|+.+.+..+++++|+++ ||
T Consensus 84 l~~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~----~~~~~dl~~~~~~~~~~vi~~~-~G 151 (417)
T 1izo_A 84 IQGMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAAVTRWE----KADEVVLFEEAKEILCRVACYW-AG 151 (417)
T ss_dssp GGGCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHT----TSSEEEHHHHHHHHHHHHHHHH-HT
T ss_pred eeecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHh----cCCCeeHHHHHHHHHHHHHHHH-cC
Confidence 3445699999999999 5999999999999999999999999996 3568999999999999999997 46
No 28
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.84 E-value=6.9e-21 Score=145.92 Aligned_cols=143 Identities=11% Similarity=0.044 Sum_probs=112.4
Q ss_pred CCCCCCccccccccccCCCchHHHHHHHHHh-CCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccc--cccccc
Q 044449 44 PPGPTPYPVIGNLLELGEKPHKSLAELAKIY-GPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKD--AIFPHQ 120 (200)
Q Consensus 44 ~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~y-G~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~--~~~~~~ 120 (200)
|||| |++|+++.+..+++.++.+++++| |||+++..++.+.+++++|+.++ ++.+. ..|++++... .....
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~- 77 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTL- 77 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTT-
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhc-
Confidence 5665 899999988778999999999999 79999998888999999999986 66543 4566543211 11111
Q ss_pred cCC-cceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHhc
Q 044449 121 HNE-FGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIF 199 (200)
Q Consensus 121 ~~~-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~f 199 (200)
.+ .++ +..+|+.|+++|+++ .++|++++++.+.+.+.+.++++++.|.+ ++++|+.+.+..+++++++++ |
T Consensus 78 -~g~~~l-~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~-~ 149 (415)
T 3awm_A 78 -LGQGGV-QGLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRAVPGWTR----KGEIVFYDELHEPLTRAVCAW-A 149 (415)
T ss_dssp -SCSSSG-GGCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH-H
T ss_pred -cCCcce-eecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH-c
Confidence 13 344 445699999999999 59999999999999999999999999963 457999999999999999998 6
Q ss_pred C
Q 044449 200 S 200 (200)
Q Consensus 200 G 200 (200)
|
T Consensus 150 G 150 (415)
T 3awm_A 150 G 150 (415)
T ss_dssp T
T ss_pred C
Confidence 6
No 29
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.84 E-value=2.9e-21 Score=150.83 Aligned_cols=159 Identities=14% Similarity=0.111 Sum_probs=118.2
Q ss_pred CCCCCCCCCCCC-ccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccc-c
Q 044449 38 GRKKPLPPGPTP-YPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKD-A 115 (200)
Q Consensus 38 ~~~~~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~-~ 115 (200)
++..+.||||++ +|++||++.+..+++.++.+++++||++|++++++.++++++||+++++++.++.. ++.++... .
T Consensus 9 ~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~~ 87 (491)
T 3dax_A 9 RRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFAT 87 (491)
T ss_dssp CCCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHHH
T ss_pred ccCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHHH
Confidence 334567899887 89999999998889999999999999999999999999999999999999975432 32222111 1
Q ss_pred ccccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHH---hhCCCceeHHHHHHHHHHH
Q 044449 116 IFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEEN---CRAGKAIDISQVVFNTSLN 192 (200)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~~~~~d~~~~~~~~~~~ 192 (200)
..... +.+.+...+|+.|+++|+.+ .++|+.++++.+.+.+.+++.+.+++.... ......+|+.+.+..++++
T Consensus 88 ~~~~~--g~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 164 (491)
T 3dax_A 88 SAKAF--GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFE 164 (491)
T ss_dssp HHHHH--TCCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHH
T ss_pred HHHHc--CCCcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHH
Confidence 11111 34444233489999999999 489999999988888888877777655321 1123468899999999999
Q ss_pred HHHHHhcC
Q 044449 193 LLSNTIFS 200 (200)
Q Consensus 193 vi~~~~fG 200 (200)
+++.++||
T Consensus 165 ~~~~~~fG 172 (491)
T 3dax_A 165 AGYLTIFG 172 (491)
T ss_dssp HHHHHHHC
T ss_pred HhHHHHcC
Confidence 99999887
No 30
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.84 E-value=6.3e-21 Score=149.13 Aligned_cols=161 Identities=10% Similarity=0.139 Sum_probs=120.7
Q ss_pred CCCCCCCCCCCCCcccccccccc-----CCCchHHHHHHHHHhCC-eEEEeecCeeE-------EEeCCHHHHHHHHHhC
Q 044449 37 RGRKKPLPPGPTPYPVIGNLLEL-----GEKPHKSLAELAKIYGP-ILSLKLGEVTT-------VVVSSAPMAKYILQDH 103 (200)
Q Consensus 37 ~~~~~~~~p~p~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------v~v~~p~~~~~il~~~ 103 (200)
...+.+.||||.++|++|+++.+ .++++.++.++++|||+ ||++++++.++ +++.+++..+.++.++
T Consensus 23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~ 102 (495)
T 3dsk_A 23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD 102 (495)
T ss_dssp -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence 33456789999999999999877 57899999999999999 99999988877 6677777666665332
Q ss_pred C----CcccCCcccccccccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCc
Q 044449 104 D----SSFYNRMVKDAIFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKA 179 (200)
Q Consensus 104 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (200)
. ..+..... ......+..+...++..+|+.|+++|+++ .+.|+... +.+.+.+++.++++++.|.+...++++
T Consensus 103 ~v~k~~~~~~~~~-~~~~l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~ 179 (495)
T 3dsk_A 103 KVEKKDLLTGTYM-PSTELTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGK 179 (495)
T ss_dssp TEECSSCTTSSSC-CCGGGGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccCC-CCccccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 1 11111111 11122221123334444699999999999 59998754 889999999999999999754444668
Q ss_pred eeHHHHHHHHHHHHHHHHhcC
Q 044449 180 IDISQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 180 ~d~~~~~~~~~~~vi~~~~fG 200 (200)
+|+.+.+..+++++++.++||
T Consensus 180 vdl~~~~~~~~~~~i~~~~~G 200 (495)
T 3dsk_A 180 ADFGGSSDGTAFNFLARAFYG 200 (495)
T ss_dssp EESHHHHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999997
No 31
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.83 E-value=5e-20 Score=140.80 Aligned_cols=146 Identities=16% Similarity=0.185 Sum_probs=113.3
Q ss_pred CCCCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEe----e-cC-eeEEEeCCHHHHHHHH-HhCCCcccCCccc
Q 044449 41 KPLPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLK----L-GE-VTTVVVSSAPMAKYIL-QDHDSSFYNRMVK 113 (200)
Q Consensus 41 ~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~----~-~~-~~~v~v~~p~~~~~il-~~~~~~~~~~~~~ 113 (200)
.+.||||+++|+. +..+++..+.++ ++||||++++ + ++ .+.++++||+++++++ .++ .|++++..
T Consensus 9 ~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~~ 80 (406)
T 1ued_A 9 APLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQF 80 (406)
T ss_dssp CCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCCC
T ss_pred CCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccccccc
Confidence 3568889988876 557899999999 9999999999 6 78 8999999999999999 543 35554321
Q ss_pred cccc-ccc---cCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHH-
Q 044449 114 DAIF-PHQ---HNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFN- 188 (200)
Q Consensus 114 ~~~~-~~~---~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~- 188 (200)
.... ... ..+.++++ .+|+.|+++|+++ .++|+.++++.+.+.+.++++++++.|.+ .++++|+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~l~~-~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~ 155 (406)
T 1ued_A 81 TQSKSGAHVEAQFVGQIST-YDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEA---EGPSADLQGLFADP 155 (406)
T ss_dssp ---------CGGGTTCGGG-CCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCTTEEHHHHTHHH
T ss_pred ccccccccccccccccccc-CCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHHH
Confidence 1100 011 01334444 4699999999999 59999999999999999999999999963 3568999988765
Q ss_pred HHHHHHHHHhcC
Q 044449 189 TSLNLLSNTIFS 200 (200)
Q Consensus 189 ~~~~vi~~~~fG 200 (200)
+++|+++. +||
T Consensus 156 ~~~~vi~~-~~G 166 (406)
T 1ued_A 156 VGAHALCE-LLG 166 (406)
T ss_dssp HHHHHHHH-HHT
T ss_pred hHHHHHHH-HcC
Confidence 99999994 676
No 32
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.81 E-value=3.8e-19 Score=136.18 Aligned_cols=151 Identities=14% Similarity=0.170 Sum_probs=113.0
Q ss_pred CCCCCCCCCccccccccccCCCchHHHHHHHHHh-CCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccc
Q 044449 41 KPLPPGPTPYPVIGNLLELGEKPHKSLAELAKIY-GPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFP 118 (200)
Q Consensus 41 ~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~y-G~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~ 118 (200)
...+|+|+++|.+.....+..+++..+.++ ++| |||+++++ ++.+.++++||+++++++.++ .|++++....+..
T Consensus 4 ~~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~ 80 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNFPA 80 (412)
T ss_dssp ----CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTSCC
T ss_pred CCCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCcccccccc
Confidence 355677777776543444567899999999 888 99999997 788999999999999999754 3444432111111
Q ss_pred cc-----c--CCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHH-HHH
Q 044449 119 HQ-----H--NEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVF-NTS 190 (200)
Q Consensus 119 ~~-----~--~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~-~~~ 190 (200)
.. . .+.++++ .+|+.|+++|+++ .++|+.++++.+.+.+.++++++++.|.+ .++++|+.+.+. .++
T Consensus 81 ~~~~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~ 155 (412)
T 2zbx_A 81 TSPRFEAVRESPQAFIG-LDPPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLA---AGPTADLVSQFALPVP 155 (412)
T ss_dssp CSGGGC----CCCCGGG-CCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHH
T ss_pred ccccccccccccccccc-CCcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHH
Confidence 10 0 1334444 4699999999999 59999999999999999999999999963 356899998876 599
Q ss_pred HHHHHHHhcC
Q 044449 191 LNLLSNTIFS 200 (200)
Q Consensus 191 ~~vi~~~~fG 200 (200)
+++++. +||
T Consensus 156 ~~vi~~-~~G 164 (412)
T 2zbx_A 156 SMVICR-LLG 164 (412)
T ss_dssp HHHHHH-HHT
T ss_pred HHHHHH-HcC
Confidence 999997 576
No 33
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.81 E-value=1.3e-19 Score=141.70 Aligned_cols=156 Identities=12% Similarity=0.097 Sum_probs=114.8
Q ss_pred CCCCCCCCCCCC-ccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccc-c
Q 044449 38 GRKKPLPPGPTP-YPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKD-A 115 (200)
Q Consensus 38 ~~~~~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~-~ 115 (200)
+++.+.||||++ +|++||++.+..+++.++.+++++||+||++++++.++++++||+++++++.++...++.++... .
T Consensus 14 ~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~ 93 (498)
T 3b6h_A 14 TRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFL 93 (498)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHH
T ss_pred ccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHH
Confidence 344577899987 89999999887778999999999999999999999999999999999999976543233332211 1
Q ss_pred ccccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHH-hhCCCceeHHHHHHHHHHHHH
Q 044449 116 IFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEEN-CRAGKAIDISQVVFNTSLNLL 194 (200)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~~~d~~~~~~~~~~~vi 194 (200)
.... .+.+.+.. +|+.| |+++ .++|+.++++.+.+.+.+++.+.++..... ......+++.+.+..++++++
T Consensus 94 ~~~~--~g~~~~~~-~~~~~---rr~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~ 166 (498)
T 3b6h_A 94 MERI--FDVQLPHY-SPSDE---KARM-KLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAG 166 (498)
T ss_dssp HHHT--SCCCCTTC-CHHHH---HHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHH
T ss_pred HHHH--cCCCcccc-CHHHH---HHHH-HHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHH
Confidence 1111 13444433 36655 5666 478888888888777777777766655321 123345899999999999999
Q ss_pred HHHhcC
Q 044449 195 SNTIFS 200 (200)
Q Consensus 195 ~~~~fG 200 (200)
+.++||
T Consensus 167 ~~~~fG 172 (498)
T 3b6h_A 167 YLTLYG 172 (498)
T ss_dssp HHHHHC
T ss_pred HHhhcC
Confidence 998887
No 34
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.80 E-value=2e-19 Score=139.80 Aligned_cols=159 Identities=11% Similarity=0.123 Sum_probs=115.7
Q ss_pred CCCCCCCCCCCcccccccccc-----CC-CchHHHHHHHHHhCC-eEEEeecC-------eeEEEeCCHHHHHHHHHh--
Q 044449 39 RKKPLPPGPTPYPVIGNLLEL-----GE-KPHKSLAELAKIYGP-ILSLKLGE-------VTTVVVSSAPMAKYILQD-- 102 (200)
Q Consensus 39 ~~~~~~p~p~~~p~~g~~~~~-----~~-~~~~~~~~~~~~yG~-v~~~~~~~-------~~~v~v~~p~~~~~il~~-- 102 (200)
.+.+.+|||.++|++|+++.+ .. +++.++.+++++||+ ||++++++ ...+++.+.+..+.++..
T Consensus 6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~ 85 (473)
T 3dan_A 6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK 85 (473)
T ss_dssp SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence 456889999999999999875 45 789999999999999 99999863 344555666544444421
Q ss_pred --CCCcccCCcccccccccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCce
Q 044449 103 --HDSSFYNRMVKDAIFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAI 180 (200)
Q Consensus 103 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 180 (200)
+...+..... ......+......+...+|+.|+++|+++ .+.|+++ ++.+.+.+++.++++++.|.+...+++++
T Consensus 86 ~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~~v 162 (473)
T 3dan_A 86 VEKKDLFTGTYM-PSTKLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKNS-SNRVIPQFETTYTELFEGLEAELAKNGKA 162 (473)
T ss_dssp EECSSCTTSSSC-CCGGGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred eecccccccccc-CCccccCCCcceeeeCCCcHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 1111111110 11111221123334445699999999999 5999994 89999999999999999997544446689
Q ss_pred eHHHHHHHHHHHHHHHHhcC
Q 044449 181 DISQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 181 d~~~~~~~~~~~vi~~~~fG 200 (200)
|+.+.+..+++++++.++||
T Consensus 163 dl~~~~~~~~~~~i~~~~~G 182 (473)
T 3dan_A 163 AFNDVGEQAAFRFLGRAYFN 182 (473)
T ss_dssp ECHHHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999998
No 35
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.80 E-value=7.7e-19 Score=135.31 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=115.7
Q ss_pred CCCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEe--------ecCeeEEEeCCHHHHHHHHHhCCCcccCCccc
Q 044449 42 PLPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLK--------LGEVTTVVVSSAPMAKYILQDHDSSFYNRMVK 113 (200)
Q Consensus 42 ~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~--------~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~ 113 (200)
..||.|..+++++.......+++..+.++ ++||||+++. +|+.+.+++++++++++++.+. ..|++++..
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~ 95 (433)
T 3ivy_A 18 PSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYENG 95 (433)
T ss_dssp --CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTTC
T ss_pred CCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCccc
Confidence 45666766776665544456799999999 8899999998 4557999999999999999654 567776543
Q ss_pred cccc--------ccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHH
Q 044449 114 DAIF--------PHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQV 185 (200)
Q Consensus 114 ~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~ 185 (200)
.... .....+.+++ ..+|+.|+++|+++ .++|++++++.+.+.+.+.++++++.|.+ ++++|+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~ 169 (433)
T 3ivy_A 96 VIPRFKNDIAREDIEVQRFVML-NMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAA----AGSGDFVEQ 169 (433)
T ss_dssp SCCCCCTTCCHHHHHGGGGSGG-GCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHH----HCEEEHHHH
T ss_pred ccccccccccccccccccCCcc-ccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh----CCCeeHHHH
Confidence 3221 1111244554 44599999999999 59999999999999999999999999962 456998888
Q ss_pred H-HHHHHHHHHHHhcC
Q 044449 186 V-FNTSLNLLSNTIFS 200 (200)
Q Consensus 186 ~-~~~~~~vi~~~~fG 200 (200)
+ ..+++++|+.+ ||
T Consensus 170 ~~~~~~~~vi~~l-~G 184 (433)
T 3ivy_A 170 VSCELPLQAIAGL-LG 184 (433)
T ss_dssp TTSHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHH-cC
Confidence 7 99999999996 66
No 36
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.79 E-value=1.3e-18 Score=132.94 Aligned_cols=147 Identities=18% Similarity=0.268 Sum_probs=114.4
Q ss_pred CCCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEee-cCee-EEEeCCHHHHHHHHHhCCCcccCCccccccc--
Q 044449 42 PLPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKL-GEVT-TVVVSSAPMAKYILQDHDSSFYNRMVKDAIF-- 117 (200)
Q Consensus 42 ~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~-~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~-- 117 (200)
+.+|+|+++|+.++ ...+++.++.+++ +||||+++.+ ++.+ .++++||+++++++.+ ..|++++......
T Consensus 8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~ 81 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVTR 81 (406)
T ss_dssp CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBCB
T ss_pred hhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCccc
Confidence 56677777788766 4578999999985 7999999986 5665 9999999999999975 3577664322111
Q ss_pred --c-cccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHH
Q 044449 118 --P-HQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNL 193 (200)
Q Consensus 118 --~-~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~v 193 (200)
. ....+.++++. +|+.|+++|+++ .++|++++++.+.+.+.++++++++.|.+ .++++|+.+.+ ..+++|+
T Consensus 82 ~~~~~~~~~~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v 156 (406)
T 1s1f_A 82 LAPHFIPARGAVGFL-DPPDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLR---AGPPADLTEAVLSPFPIAV 156 (406)
T ss_dssp SSSSCSSCTTSGGGC-CTTHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTHHHHHH
T ss_pred ccccccccccccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHhhHhHHHH
Confidence 1 11124556555 599999999999 59999999999999999999999999963 24589988665 5799999
Q ss_pred HHHHhcC
Q 044449 194 LSNTIFS 200 (200)
Q Consensus 194 i~~~~fG 200 (200)
++. +||
T Consensus 157 i~~-~~G 162 (406)
T 1s1f_A 157 ICE-LMG 162 (406)
T ss_dssp HHH-HHT
T ss_pred HHH-HhC
Confidence 998 476
No 37
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.79 E-value=6.7e-20 Score=142.57 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=115.6
Q ss_pred CCCCCCCCCCCC-ccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccc-c
Q 044449 38 GRKKPLPPGPTP-YPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKD-A 115 (200)
Q Consensus 38 ~~~~~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~-~ 115 (200)
+++.+.||||++ +|++||++.+..+++.++.+++++||||+++++++.++++++||+++++++.++.. ++.++... .
T Consensus 14 ~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~ 92 (475)
T 3b98_A 14 TRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVL 92 (475)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHH
T ss_pred ccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHH
Confidence 344578899987 89999999887789999999999999999999999999999999999999976432 43322111 1
Q ss_pred ccccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHh--hCCCceeHHHHHHHHHHHH
Q 044449 116 IFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENC--RAGKAIDISQVVFNTSLNL 193 (200)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~--~~~~~~d~~~~~~~~~~~v 193 (200)
.... .+.+.+.. +|+.| |+++ .++|+.++++.+.+.+.+++.++++.+.... .....+++.+.+..+++++
T Consensus 93 ~~~~--~g~~~~~~-~~~~~---R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (475)
T 3b98_A 93 MKRI--FNMILPSH-NPESE---KKRA-EMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKT 165 (475)
T ss_dssp HHHT--TCCCCTTC-CHHHH---HHHH-HHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHH
T ss_pred HHHH--hCCCCCCC-ChHHH---HHHH-HHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHH
Confidence 1111 13444433 36544 6778 4899999999999999998888887764211 1223578899999999999
Q ss_pred HHHHhcC
Q 044449 194 LSNTIFS 200 (200)
Q Consensus 194 i~~~~fG 200 (200)
++...||
T Consensus 166 ~~~~~~g 172 (475)
T 3b98_A 166 GYLTVFG 172 (475)
T ss_dssp HHHHHHC
T ss_pred hhhheeC
Confidence 8888776
No 38
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.77 E-value=3.4e-18 Score=130.74 Aligned_cols=135 Identities=11% Similarity=0.142 Sum_probs=104.5
Q ss_pred cccCCCchHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccc---ccc----CCcceee
Q 044449 57 LELGEKPHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFP---HQH----NEFGMVL 128 (200)
Q Consensus 57 ~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~ 128 (200)
..+..+++..+.++ ++||||+++++ ++.+.++++||+++++++.++ .|++++....+.. ... .+.++++
T Consensus 20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (408)
T 3abb_A 20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLIG 96 (408)
T ss_dssp CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTTT
T ss_pred cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCcccccccccccc
Confidence 34567899999999 89999999998 788999999999999999754 2444432111110 110 1234444
Q ss_pred ccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHH-HHHHHHHHHHhcC
Q 044449 129 LPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVF-NTSLNLLSNTIFS 200 (200)
Q Consensus 129 ~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG 200 (200)
.+|+.|+++|+++ .++|+.++++.+.+.+.++++++++.|.+ .++++|+.+.+. .+++++++. +||
T Consensus 97 -~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G 163 (408)
T 3abb_A 97 -VDDPVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLG 163 (408)
T ss_dssp -CCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHT
T ss_pred -CCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhC
Confidence 4699999999999 59999999999999999999999999963 456899988776 599999997 576
No 39
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.77 E-value=2.3e-18 Score=131.76 Aligned_cols=143 Identities=14% Similarity=0.135 Sum_probs=105.5
Q ss_pred hcCCCCCCCCCCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcc
Q 044449 33 SSFSRGRKKPLPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMV 112 (200)
Q Consensus 33 ~~~~~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~ 112 (200)
.+++..++.+.+|||.. ..+++.++.++++ |||| +.++.+.++++|++++++++.+. ..|++++.
T Consensus 10 iyr~~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~ 74 (411)
T 2jjn_A 10 CARRTLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPT 74 (411)
T ss_dssp -------CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGG
T ss_pred hhhcccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCccc
Confidence 44456666788888882 2467888999976 9999 45667899999999999999864 46877754
Q ss_pred cccccccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHH
Q 044449 113 KDAIFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDIS-QVVFNTSL 191 (200)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~-~~~~~~~~ 191 (200)
... ......+.++++. +|+.|+++|+++ .++|++++++.+.+.+.++++++++. .++++|+. +....+++
T Consensus 75 ~~~-~~~~~~~~~~~~~-~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~------~~~~~d~~~~~~~~~~~ 145 (411)
T 2jjn_A 75 RVI-EGASPTPGMIHEI-DPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSLLAD------AGESFDLVDVLAFPLPV 145 (411)
T ss_dssp GGS-TTCCCCTTCGGGC-CTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHT------SCSEEEHHHHTTTHHHH
T ss_pred ccC-CcccccccccccC-CchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHhc------CCCceeHHHHHHHHHHH
Confidence 221 1111224455444 599999999999 59999999999999999999999877 24579998 45568999
Q ss_pred HHHHHHhcC
Q 044449 192 NLLSNTIFS 200 (200)
Q Consensus 192 ~vi~~~~fG 200 (200)
|+|+.+ ||
T Consensus 146 ~vi~~~-fG 153 (411)
T 2jjn_A 146 TIVAEL-LG 153 (411)
T ss_dssp HHHHHH-HT
T ss_pred HHHHHH-cC
Confidence 999998 87
No 40
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.76 E-value=5.8e-18 Score=128.44 Aligned_cols=135 Identities=13% Similarity=0.149 Sum_probs=106.4
Q ss_pred cCCCchHHHHHHHHHhCCeEEEeecC----eeEEEeCCHHHHHHHHHhCCCcccCCcccccccccccCCcceeeccCCcc
Q 044449 59 LGEKPHKSLAELAKIYGPILSLKLGE----VTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVLLPVSTT 134 (200)
Q Consensus 59 ~~~~~~~~~~~~~~~yG~v~~~~~~~----~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 134 (200)
+..+++.++.++ ++||||++++.++ .+.++++||+++++++. +...|++++......... ...+.++..+|+.
T Consensus 10 ~~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~ 86 (384)
T 3oo3_A 10 LRLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADRA-LLPGILQAYDPPD 86 (384)
T ss_dssp ETTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC-----C-CCTTCGGGCCTTH
T ss_pred cccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCcccccccccc-ccccccccCCChh
Confidence 457899999999 5999999999876 89999999999999995 456788776543222111 1234445556999
Q ss_pred hHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHhcC
Q 044449 135 WKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 135 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG 200 (200)
|+++|+.+ .++|++++++.+.+.+.+.++++++.|.+ .++++|+.+.+...+.++++..+||
T Consensus 87 ~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G 148 (384)
T 3oo3_A 87 HTRLRRTV-APAYSARRMERLRPRIEEIVEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLG 148 (384)
T ss_dssp HHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHT
T ss_pred HHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcC
Confidence 99999999 59999999999999999999999999963 5678999999988777777766777
No 41
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.76 E-value=1.4e-17 Score=127.12 Aligned_cols=133 Identities=15% Similarity=0.197 Sum_probs=105.3
Q ss_pred cCCCchHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCcccCCcc--c-cccccccc--CCcceeeccCC
Q 044449 59 LGEKPHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFYNRMV--K-DAIFPHQH--NEFGMVLLPVS 132 (200)
Q Consensus 59 ~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~--~-~~~~~~~~--~~~~~~~~~~g 132 (200)
+..+++..+.++ ++||||+++++ ++.+.++++||+++++++.++ .|++++. . ........ .+.++++ .+|
T Consensus 17 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g 92 (403)
T 3aba_A 17 CPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLW-QDE 92 (403)
T ss_dssp STTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTT-CCT
T ss_pred cccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccc-CCc
Confidence 457889999999 89999999997 789999999999999999864 4666532 1 11101111 2445544 469
Q ss_pred cchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 133 TTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 133 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
+.|+++|+++ .++|++++++.+.+.+.++++++++.|.+ .++++|+.+.+ ..+++++++. +||
T Consensus 93 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G 156 (403)
T 3aba_A 93 PEHTSDRKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFG 156 (403)
T ss_dssp THHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHT
T ss_pred hhHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcC
Confidence 9999999999 59999999999999999999999999974 35679998665 5799999997 576
No 42
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.76 E-value=3.4e-18 Score=131.53 Aligned_cols=146 Identities=12% Similarity=0.077 Sum_probs=111.9
Q ss_pred CCCCCCCCccccccccccC-----CCchHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCcccCCcc-cc
Q 044449 42 PLPPGPTPYPVIGNLLELG-----EKPHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFYNRMV-KD 114 (200)
Q Consensus 42 ~~~p~p~~~p~~g~~~~~~-----~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~-~~ 114 (200)
+.||| ++|++.... .+++..+.++++ ||||++++. |+.+.+++++++.+++++.+. ..|++++. ..
T Consensus 6 ~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~~ 78 (428)
T 1cpt_A 6 TIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSEI 78 (428)
T ss_dssp CSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCSS
T ss_pred ccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccccc
Confidence 55666 778765442 457888988876 799999998 678999999999999999754 56877764 22
Q ss_pred cc---c---c---cc---cCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeH
Q 044449 115 AI---F---P---HQ---HNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDI 182 (200)
Q Consensus 115 ~~---~---~---~~---~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~ 182 (200)
.. . . .+ ..+.++++. +|+.|+++|+++ .++|+.++++.+.+.+.++++++++.|.+ .++++|+
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~~~~l~~~-~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~ 153 (428)
T 1cpt_A 79 LYDQNNEAFMRSISGGCPHVIDSLTSM-DPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLD---FDGECDF 153 (428)
T ss_dssp CCCHHHHHHHHHHTTTSSCSSCCGGGC-CTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHT---SSSEEEH
T ss_pred CCcccccchhccccccccccccccccC-ChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHH---hCCCeeh
Confidence 11 1 1 11 012345444 599999999999 59999999999999999999999999963 2357999
Q ss_pred HH-HHHHHHHHHHHHHhcC
Q 044449 183 SQ-VVFNTSLNLLSNTIFS 200 (200)
Q Consensus 183 ~~-~~~~~~~~vi~~~~fG 200 (200)
.+ ....+++|+|+.+ ||
T Consensus 154 ~~~~~~~~~~~vi~~~-fG 171 (428)
T 1cpt_A 154 MTDCALYYPLHVVMTA-LG 171 (428)
T ss_dssp HHHTTTTHHHHHHHHH-HT
T ss_pred HHHHHhhhHHHHHHHH-cC
Confidence 75 4567999999998 87
No 43
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.75 E-value=1.5e-17 Score=127.23 Aligned_cols=132 Identities=15% Similarity=0.186 Sum_probs=105.7
Q ss_pred cCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccc-----cccccCCcceeeccCCc
Q 044449 59 LGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAI-----FPHQHNEFGMVLLPVST 133 (200)
Q Consensus 59 ~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~ 133 (200)
+..+++..+.++ ++||||+++++++.+.++++||+++++++.++ .|++++..... ......+.++++ .+|+
T Consensus 18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~ 93 (411)
T 3a4g_A 18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDP--RLSKDWRHTLPEDQRADMPATPTPMMIL-MDPP 93 (411)
T ss_dssp GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCT--TEESCGGGGSCGGGCTTCCSCSSCCGGG-CCTT
T ss_pred hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCC--CcccccccccccccccccCccccccccc-CCch
Confidence 467899999999 99999999999999999999999999999765 27776532211 111112455544 4599
Q ss_pred chHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHH-HHHHHHHHHHHHHhcC
Q 044449 134 TWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQ-VVFNTSLNLLSNTIFS 200 (200)
Q Consensus 134 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~-~~~~~~~~vi~~~~fG 200 (200)
.|+++|+++ .++|++++++.+.+.+.++++++++.|. .++++|+.+ ....+++++|+.+ ||
T Consensus 94 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~vd~~~~~~~~~~~~vi~~~-~G 155 (411)
T 3a4g_A 94 DHTRLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLP----TDGPVDLMREYAFQIPVQVICEL-LG 155 (411)
T ss_dssp HHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSC----SSSCEEHHHHTTTTHHHHHHHHH-HT
T ss_pred HHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHH----hcCCccHHHHHHHHhHHHHHHHH-hC
Confidence 999999999 5999999999999999999999999995 235799964 5578999999975 76
No 44
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.75 E-value=5.9e-18 Score=129.69 Aligned_cols=151 Identities=9% Similarity=0.013 Sum_probs=112.4
Q ss_pred CCCCCCCCCCCCcccc--ccccc-----cCCCchHHHHHHHHHhC--CeEEEeecCeeEEEeCCHHHHHHHHHhCCCccc
Q 044449 38 GRKKPLPPGPTPYPVI--GNLLE-----LGEKPHKSLAELAKIYG--PILSLKLGEVTTVVVSSAPMAKYILQDHDSSFY 108 (200)
Q Consensus 38 ~~~~~~~p~p~~~p~~--g~~~~-----~~~~~~~~~~~~~~~yG--~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~ 108 (200)
.++.+.||+|.+.|.. +.+-. +..+++..+.+++ +|| ||+++...| +.++++|++++++++.+ ...|+
T Consensus 7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f~ 83 (415)
T 2zwu_A 7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHFS 83 (415)
T ss_dssp ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTEE
T ss_pred cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccccC
Confidence 3456788999988764 32211 2357888999995 799 999998333 68999999999999974 45687
Q ss_pred CCc-ccccccccccCCcc-eeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH
Q 044449 109 NRM-VKDAIFPHQHNEFG-MVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV 186 (200)
Q Consensus 109 ~~~-~~~~~~~~~~~~~~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~ 186 (200)
+++ ...... ...+.+ +++. +|+.|+++|+++ .++|+.++++.+.+.+.++++++++.|.+ ++++|+.+.+
T Consensus 84 ~~~~~~~~~~--~~~~~~~l~~~-~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~ 155 (415)
T 2zwu_A 84 SECPFIPREA--GEAYDFIPTSM-DPPEQRQFRALA-NQVVGMPVVDKLENRIQELACSLIESLRP----QGQCNFTEDY 155 (415)
T ss_dssp TTSCSSSHHH--HHHCCCTTTTC-CTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGG----GTEEEHHHHT
T ss_pred CCcccCCCCc--cccccccCccC-CCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccHHHHH
Confidence 765 111111 111344 5544 599999999999 59999999999999999999999999963 2379999755
Q ss_pred -HHHHHHHHHHHhcC
Q 044449 187 -FNTSLNLLSNTIFS 200 (200)
Q Consensus 187 -~~~~~~vi~~~~fG 200 (200)
..+++++++.+ ||
T Consensus 156 ~~~~~~~vi~~~-~G 169 (415)
T 2zwu_A 156 AEPFPIRIFMLL-AG 169 (415)
T ss_dssp TTHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHH-cC
Confidence 78999999998 87
No 45
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.74 E-value=4.1e-17 Score=125.12 Aligned_cols=133 Identities=14% Similarity=0.147 Sum_probs=106.6
Q ss_pred cCCCchHHHHHHHHHhCCeEEEeec-CeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccc-------cCCcceeecc
Q 044449 59 LGEKPHKSLAELAKIYGPILSLKLG-EVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQ-------HNEFGMVLLP 130 (200)
Q Consensus 59 ~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 130 (200)
+..+++..+.+++++ |||++++++ |.+.++++||+++++++.++ .|++++......... ..+.++++.
T Consensus 27 ~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 102 (417)
T 3tyw_A 27 CPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRT- 102 (417)
T ss_dssp STTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGC-
T ss_pred cccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhc-
Confidence 457999999999988 999999986 58999999999999999865 576653221111111 124455444
Q ss_pred CCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 131 VSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 131 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
+|+.|+++|+++ .++|+.++++.+.+.+.+.++++++.|.+ .++++|+.+.+ ..+++++++.+ ||
T Consensus 103 dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G 168 (417)
T 3tyw_A 103 DAPEHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LG 168 (417)
T ss_dssp CHHHHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HT
T ss_pred CCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hC
Confidence 599999999999 59999999999999999999999999964 45679998877 58999999987 76
No 46
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.74 E-value=8.7e-18 Score=128.51 Aligned_cols=136 Identities=18% Similarity=0.233 Sum_probs=105.6
Q ss_pred ccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcc--cccc-cc-----ccc--CCccee
Q 044449 58 ELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMV--KDAI-FP-----HQH--NEFGMV 127 (200)
Q Consensus 58 ~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~--~~~~-~~-----~~~--~~~~~~ 127 (200)
.+..+++..+.++ ++||||+++++++.+.++++||+++++++.++. +++++. .... .. ... .+.++
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 87 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENM- 87 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSG-
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccccc-
Confidence 4567899999999 999999999998899999999999999997542 444331 1100 00 000 13344
Q ss_pred eccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHH-HHHHHHHHHHhcC
Q 044449 128 LLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVF-NTSLNLLSNTIFS 200 (200)
Q Consensus 128 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG 200 (200)
+..+|+.|+++|+++ .++|++++++.+.+.+.++++++++.|.+. .+++++|+.+.+. .+++|+|+. +||
T Consensus 88 ~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G 158 (408)
T 1odo_A 88 FTAYGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMG 158 (408)
T ss_dssp GGCCHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHT
T ss_pred cccCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhC
Confidence 445699999999999 599999999999999999999999999642 2366899998876 599999996 576
No 47
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.74 E-value=2e-17 Score=126.86 Aligned_cols=133 Identities=14% Similarity=0.177 Sum_probs=104.9
Q ss_pred cCCCchHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCcccCCccc-cccccccc--CCcceeeccCCcc
Q 044449 59 LGEKPHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFYNRMVK-DAIFPHQH--NEFGMVLLPVSTT 134 (200)
Q Consensus 59 ~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~g~~ 134 (200)
+..+++..+.++ ++||||+++++ ++.+.++++||+++++++.++ .|++++.. ........ .+.++++ .+|+.
T Consensus 35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~-~dg~~ 110 (417)
T 2y5n_A 35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLS-MDPPE 110 (417)
T ss_dssp SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGG-CCTTH
T ss_pred hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCcc-CCchH
Confidence 457899999999 89999999997 789999999999999999754 46665432 11111111 2445544 46999
Q ss_pred hHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 135 WKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 135 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
|+++|+++ .++|++++++.+.+.+.++++++++.|.+ ++.++|+.+.+ ..+++++|+. +||
T Consensus 111 h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G 172 (417)
T 2y5n_A 111 HSRLRRLV-VKAFTARRAESLRPRAREIAHELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLG 172 (417)
T ss_dssp HHHHHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHT
T ss_pred HHHHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcC
Confidence 99999999 59999999999999999999999999973 22279998766 5699999998 576
No 48
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.73 E-value=2.5e-17 Score=125.78 Aligned_cols=132 Identities=18% Similarity=0.169 Sum_probs=105.7
Q ss_pred cCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccc--c----ccc---cc-cc----CCc
Q 044449 59 LGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVK--D----AIF---PH-QH----NEF 124 (200)
Q Consensus 59 ~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~--~----~~~---~~-~~----~~~ 124 (200)
+..+++..+.++ ++||||++++.++.+.++++||+++++++.++ .|++++.. . ... .. .. .+.
T Consensus 12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (404)
T 1z8o_A 12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT 88 (404)
T ss_dssp GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence 457899999999 99999999999889999999999999999865 57766532 1 000 11 10 244
Q ss_pred ceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 125 GMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 125 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
++++. +|+.|+++|+++ .++|++++++.+.+.+.++++++++.|. .++++|+.+.+ ..+++++|+.+ ||
T Consensus 89 ~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~~vi~~~-~G 158 (404)
T 1z8o_A 89 NMGTS-DPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVG----DSGVVDIVDRFAHPLPIKVICEL-LG 158 (404)
T ss_dssp SGGGC-CTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSC----SSSEEEHHHHTTTHHHHHHHHHH-TT
T ss_pred ccccC-CCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhh----hcCCcchHHHHhHHHHHHHHHHH-hC
Confidence 55444 599999999999 5999999999999999999999999985 35689998655 68999999984 76
No 49
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.73 E-value=9.4e-17 Score=122.61 Aligned_cols=132 Identities=15% Similarity=0.125 Sum_probs=104.8
Q ss_pred cCCCchHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCcccCCccccc-ccccccCCcc--eeeccCC--
Q 044449 59 LGEKPHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDA-IFPHQHNEFG--MVLLPVS-- 132 (200)
Q Consensus 59 ~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~g-- 132 (200)
+..+++.++.++ ++||||+++++ ++.+.++++||+++++++.++ .|++++.... ..... .+.+ +++. +|
T Consensus 24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~-~g~~ 98 (404)
T 2xbk_A 24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLIS-DADA 98 (404)
T ss_dssp BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCB-CSCH
T ss_pred cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceee-CCCC
Confidence 356889999999 89999999997 789999999999999999754 4666543221 11111 2344 4444 59
Q ss_pred ----cchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 133 ----TTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 133 ----~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
+.|+++|+++ .++|++++++.+.+.+.+.++++++.|.+ .++++|+.+.+ ..+++++++. +||
T Consensus 99 ~~~~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G 166 (404)
T 2xbk_A 99 ESGRRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIG 166 (404)
T ss_dssp HHHHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHT
T ss_pred CCCCchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhC
Confidence 9999999999 59999999999999999999999999963 45689998655 5799999997 576
No 50
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.72 E-value=2.2e-17 Score=126.05 Aligned_cols=133 Identities=16% Similarity=0.166 Sum_probs=105.0
Q ss_pred cCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccccc----ccccCCcceeeccCCcc
Q 044449 59 LGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIF----PHQHNEFGMVLLPVSTT 134 (200)
Q Consensus 59 ~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 134 (200)
+..+++.++.++ ++||||++++.++.+.++++|++++++++.++ ..|++++...... .....+.++++. +|+.
T Consensus 11 ~~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~ 87 (404)
T 3ejb_B 11 FLKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQ-NQPD 87 (404)
T ss_dssp HHHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGC-CTTH
T ss_pred cccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhc-CCch
Confidence 346889999988 68999999999999999999999999999866 5677665322110 011124455444 5999
Q ss_pred hHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHhcC
Q 044449 135 WKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDIS-QVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 135 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG 200 (200)
|+++|+++ .++|++++++.+.+.+.++++++++.|. +++.+|+. +....+++++++.+ ||
T Consensus 88 h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~d~~~~~~~~~~~~vi~~~-~G 148 (404)
T 3ejb_B 88 HRRLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQ----GKKKMEVISDFAFPLASFVIANI-IG 148 (404)
T ss_dssp HHHHHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTT----TTSEEEHHHHTHHHHHHHHHHHH-HT
T ss_pred HHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhh----hcCCcchHHHHHHHHHHHHHHHH-cC
Confidence 99999999 5999999999999999999999999986 45679975 55567999999985 65
No 51
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.72 E-value=3e-17 Score=126.46 Aligned_cols=134 Identities=13% Similarity=0.096 Sum_probs=105.7
Q ss_pred CCchHHHHHHHHHhCCeEEEeec-------CeeEEEeCCHHHHHHHHHhCCCcccCCccc--c-cccccccCCcceeecc
Q 044449 61 EKPHKSLAELAKIYGPILSLKLG-------EVTTVVVSSAPMAKYILQDHDSSFYNRMVK--D-AIFPHQHNEFGMVLLP 130 (200)
Q Consensus 61 ~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~~~~il~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 130 (200)
.+++..+.+++ +||||+++..+ +.+.++++||+++++++.++ ..|++++.. . ........+.++++.
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~- 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVL- 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGC-
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccC-
Confidence 46888899995 68999999886 67899999999999999864 468777532 1 111111114455555
Q ss_pred CCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 131 VSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 131 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
+|+.|+++|+++ .++|++++++.+.+.+.++++++++.|.+. .+++++|+.+.+ ..+++++++++ ||
T Consensus 121 dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vd~~~~~~~~~~~~vi~~~-~G 188 (435)
T 2wm5_A 121 DDPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIAN-NPDRQADLVSELAGPLPLQIICDM-MG 188 (435)
T ss_dssp CTTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEHHHHTTTHHHHHHHHHH-HT
T ss_pred CcHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcEehHHHHHHHHHHHHHHHH-cC
Confidence 599999999999 599999999999999999999999999642 234579998765 78999999998 87
No 52
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.72 E-value=1.7e-17 Score=126.45 Aligned_cols=134 Identities=16% Similarity=0.083 Sum_probs=105.1
Q ss_pred ccCCCchHHHHHHHHHh--CCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccccCCcceeeccCCcch
Q 044449 58 ELGEKPHKSLAELAKIY--GPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVLLPVSTTW 135 (200)
Q Consensus 58 ~~~~~~~~~~~~~~~~y--G~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 135 (200)
.+..+++.++.+++++| |||+++..++ +.++++||+.+++++. +...|++++......... .+...++..+|+.|
T Consensus 16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 92 (398)
T 4fb2_A 16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYETG-EFELMMAGQDDPVH 92 (398)
T ss_dssp CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC-----CCCTTTTCCTTHH
T ss_pred hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCCc-ccccCcccCCchHH
Confidence 34578999999999999 9999998876 5899999999999994 456787766433211111 22333455569999
Q ss_pred HHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHhcC
Q 044449 136 KNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDIS-QVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 136 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG 200 (200)
+++|+++ .++|+.++++.+.+.+.++++++++.|. .+..+|+. +....+++++++. +||
T Consensus 93 ~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~~vi~~-~~G 152 (398)
T 4fb2_A 93 KKYRQLV-AKPFSPEATDLFTEQLRQSTNDLIDARI----ELGEGDAATWLANEIPARLTAI-LLG 152 (398)
T ss_dssp HHHHHHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTT----TTTEEEHCCCCCTTHHHHHHHH-HTT
T ss_pred HHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHh----hcCCccHHHHHHHHHHHHHHHH-HcC
Confidence 9999999 5999999999999999999999999985 23468874 4557899999998 576
No 53
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.72 E-value=8.9e-17 Score=123.09 Aligned_cols=147 Identities=16% Similarity=0.150 Sum_probs=109.4
Q ss_pred CCCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCcccCCccccccc---
Q 044449 42 PLPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIF--- 117 (200)
Q Consensus 42 ~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~--- 117 (200)
...+||.. |+- ..+..+++.++.+++ +||||+++++ ++.+.++++||+++++++.++ .|++++......
T Consensus 7 ~~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~ 79 (413)
T 2z36_A 7 DELAGLEL-PVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFT 79 (413)
T ss_dssp ---CCCEE-CCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSS
T ss_pred HHhccccC-CCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccc
Confidence 44566653 432 234578999999997 7899999997 789999999999999999863 577654321111
Q ss_pred cc-cc-----CCcc-eeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHH
Q 044449 118 PH-QH-----NEFG-MVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNT 189 (200)
Q Consensus 118 ~~-~~-----~~~~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~ 189 (200)
.. .. .+.+ +++ .+|+.|+++|+++ .++|++++++.+.+.+.++++++++.|.+ .+++++|+.+.+ ..+
T Consensus 80 ~~~~~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~~~d~~~~~~~~~ 155 (413)
T 2z36_A 80 LDAATLQQLRSQPPLMLG-MDGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLA--TDQRPVDLVQALSLPV 155 (413)
T ss_dssp CCHHHHHHHTTSCCCGGG-CCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTT--CSCSSEEHHHHTTTHH
T ss_pred cccccccccccccccccc-cCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCccHHHHHhhhh
Confidence 01 11 2455 444 4599999999999 59999999999999999999999999962 136689988655 579
Q ss_pred HHHHHHHHhcC
Q 044449 190 SLNLLSNTIFS 200 (200)
Q Consensus 190 ~~~vi~~~~fG 200 (200)
++++++.+ ||
T Consensus 156 ~~~vi~~~-~G 165 (413)
T 2z36_A 156 PSLVICEL-LG 165 (413)
T ss_dssp HHHHHHHH-HT
T ss_pred HHHHHHHH-hC
Confidence 99999984 76
No 54
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.72 E-value=9.8e-17 Score=122.77 Aligned_cols=132 Identities=18% Similarity=0.226 Sum_probs=102.8
Q ss_pred CCCchHHHHHHHHHhCCeEEEeecC--eeEEEeCCHHHHHHHHHhCCCcccCCccccc----ccccccC-CcceeeccCC
Q 044449 60 GEKPHKSLAELAKIYGPILSLKLGE--VTTVVVSSAPMAKYILQDHDSSFYNRMVKDA----IFPHQHN-EFGMVLLPVS 132 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~~~~~~~--~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~g 132 (200)
+++++..+.+++ +||||+++.+++ .+.+++++|+++++++.+ ..|++++.... ....... +.++++ .+|
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~dg 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLAF-ADQ 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCSTT-CCT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhcccccccc-CCc
Confidence 456779999987 899999998754 789999999999999975 35766543211 1111111 445544 469
Q ss_pred cchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHH-HHHHHHHHHHhcC
Q 044449 133 TTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVF-NTSLNLLSNTIFS 200 (200)
Q Consensus 133 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG 200 (200)
+.|+++|+++ .++|++++++.+.+.+.+.++++++.|.+ .++++|+.+.+. .+++|+|+. +||
T Consensus 102 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G 165 (411)
T 2dkk_A 102 PDHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMG 165 (411)
T ss_dssp THHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHT
T ss_pred hHHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhC
Confidence 9999999999 59999999999999999999999999964 345799987775 799999998 476
No 55
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.70 E-value=9.3e-17 Score=123.03 Aligned_cols=130 Identities=16% Similarity=0.119 Sum_probs=103.2
Q ss_pred CCCchHHHHHHHHHhCCeE-----EEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccc-ccc--cc-c-cCCcceeec
Q 044449 60 GEKPHKSLAELAKIYGPIL-----SLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKD-AIF--PH-Q-HNEFGMVLL 129 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~-----~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~-~~~--~~-~-~~~~~~~~~ 129 (200)
..+++.++.++ ++||||+ +++. .+.++++||+++++++.++ ..|++++... ... .. . ..+.++++.
T Consensus 24 ~~~p~~~~~~l-~~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~ 99 (414)
T 2uuq_A 24 WPNPWPMYRAL-RDHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ 99 (414)
T ss_dssp TTCCHHHHHHH-HHHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred ccCchHHHHHH-HhcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC
Confidence 36889999998 4789999 7765 5789999999999999865 5687775432 111 11 1 225566555
Q ss_pred cCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHhcC
Q 044449 130 PVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDIS-QVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 130 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG 200 (200)
+|+.|+++|+++ .++|++++++.+.+.+.++++++++.|.+ ++++|+. +++..+++|+++. +||
T Consensus 100 -~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~vdl~~~~~~~~~~~vi~~-~~G 164 (414)
T 2uuq_A 100 -DPPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRA----NGGGDIVTELFKPLPSMVVAH-YLG 164 (414)
T ss_dssp -CTTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHH----TTEEEHHHHTTTHHHHHHHHH-HTT
T ss_pred -CchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccHHHHHHHHhHHHHHHH-HhC
Confidence 599999999999 59999999999999999999999999973 2469996 5678999999998 576
No 56
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.70 E-value=9.7e-17 Score=122.81 Aligned_cols=134 Identities=19% Similarity=0.244 Sum_probs=103.7
Q ss_pred ccCCCchHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCcccCCc-ccccc--ccccc--------C-Cc
Q 044449 58 ELGEKPHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFYNRM-VKDAI--FPHQH--------N-EF 124 (200)
Q Consensus 58 ~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~-~~~~~--~~~~~--------~-~~ 124 (200)
.+..+++..+.++ ++||||+++++ ++.+.++++||+++++++.++. +++++ ..... ..... . +.
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR 90 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence 4457899999999 99999999997 7899999999999999997542 44433 11100 00000 1 33
Q ss_pred ceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHH-HHHHHHHHHHhcC
Q 044449 125 GMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVF-NTSLNLLSNTIFS 200 (200)
Q Consensus 125 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG 200 (200)
++ +..+|+.|+++|+++ .++|++++++.+.+.+.++++++++.|.+ +++++|+.+.+. .+++++++. +||
T Consensus 91 ~l-~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G 161 (411)
T 1gwi_A 91 SM-LTVDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMG 161 (411)
T ss_dssp SG-GGCCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHT
T ss_pred cc-ccCCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhC
Confidence 44 444699999999999 59999999999999999999999999852 356899988776 599999996 576
No 57
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.70 E-value=1e-16 Score=124.03 Aligned_cols=130 Identities=17% Similarity=0.118 Sum_probs=103.9
Q ss_pred chHHHHHHHHHhCCeE--EEe-ecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccc-------------cCCcce
Q 044449 63 PHKSLAELAKIYGPIL--SLK-LGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQ-------------HNEFGM 126 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~--~~~-~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 126 (200)
++..+.++ ++||||+ ++. .++.+.+++++++++++++.+. ..|++++......... ..+.++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 88888888 6789999 887 6778999999999999999765 6787765432211100 012344
Q ss_pred eeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 127 VLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 127 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
+ ..+|+.|+++|+++ .++|++++++.+.+.+.++++++++.|.+ .++++|+.+.+ ..+++++|+.+ ||
T Consensus 125 ~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-~G 193 (450)
T 3tkt_A 125 V-QMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-LG 193 (450)
T ss_dssp G-GCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-TT
T ss_pred c-cCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-cC
Confidence 4 44599999999999 59999999999999999999999999963 36789987777 69999999985 76
No 58
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.69 E-value=1.5e-16 Score=121.26 Aligned_cols=126 Identities=11% Similarity=0.024 Sum_probs=100.9
Q ss_pred CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccccCCcceeeccCCcchHHHH
Q 044449 60 GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVLLPVSTTWKNLR 139 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 139 (200)
..+++.++.++++ ||||+++. .+.++++||+++++++.++ ..|++++... .... .+.++++. +|+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~--~~~~l~~~-~g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQP--ALPMMIDM-DDPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSC--CCSSGGGC-CTTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCc-ccccCccccC-Cccc--cccccccc-CchHHHHHH
Confidence 4688999999987 99999764 3789999999999999764 3677765322 1111 24455444 599999999
Q ss_pred hhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHhcC
Q 044449 140 KLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDIS-QVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 140 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG 200 (200)
+++ .++|++++++.+.+.+.+.++++++.|.+ ++++|+. +....+++|+|+.+ ||
T Consensus 88 ~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG 143 (398)
T 2xkr_A 88 KLV-NAGFTRKRVKDKEASIAALCDTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LG 143 (398)
T ss_dssp HHH-GGGSCHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HT
T ss_pred HHh-hhhhCHHHHHHHHHHHHHHHHHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hC
Confidence 999 59999999999999999999999999862 3479998 55678999999998 87
No 59
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.68 E-value=3.1e-16 Score=120.50 Aligned_cols=131 Identities=14% Similarity=0.068 Sum_probs=102.9
Q ss_pred CCCchHHHHHHHHHhCCeEEEeec--CeeEEEeCCHHHHHHHHHhCCCcccCCccc--------c-cccc----c-ccCC
Q 044449 60 GEKPHKSLAELAKIYGPILSLKLG--EVTTVVVSSAPMAKYILQDHDSSFYNRMVK--------D-AIFP----H-QHNE 123 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~~~~~~--~~~~v~v~~p~~~~~il~~~~~~~~~~~~~--------~-~~~~----~-~~~~ 123 (200)
..+++.++.+++ +||||+++++| +.+.++++||+.+++++.++ .|++++.. . .... . ...+
T Consensus 19 ~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 467899999986 59999999987 67899999999999999864 67776531 0 0000 0 1113
Q ss_pred cceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHH-HHHHHHHHHHHHhcC
Q 044449 124 FGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQV-VFNTSLNLLSNTIFS 200 (200)
Q Consensus 124 ~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG 200 (200)
.++++. +|+.|+++|+++ .++|++++++.+.+.+.+.++++++.|.+ . +++|+.+. ...+++|+|+.+ ||
T Consensus 96 ~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~-g~~dl~~~~~~~~~~~vi~~~-~G 166 (425)
T 2z3t_A 96 NWLVFL-DPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRA---Q-RRPDLVEGFAAPLPILVISAL-LG 166 (425)
T ss_dssp TCGGGC-CHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTT---S-SSCBHHHHTTTHHHHHHHHHH-HT
T ss_pred cccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh---c-CCccHHHHHHHHHHHHHHHHH-hC
Confidence 555555 599999999999 59999999999999999999999999962 2 37998764 578999999998 77
No 60
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.68 E-value=1e-16 Score=122.86 Aligned_cols=133 Identities=16% Similarity=0.140 Sum_probs=102.2
Q ss_pred CCCchHHHHHHHHHhCCeEEEeecC--eeEEEeCCHHHHHHHHHhCCCcccCCcccccccccccC--C-cceeeccCCcc
Q 044449 60 GEKPHKSLAELAKIYGPILSLKLGE--VTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHN--E-FGMVLLPVSTT 134 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~~~~~~~--~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~g~~ 134 (200)
..+++..+.++++ ||||+++...| .+.+++++++++++++.+ ...|++++........... . .+.++..+|+.
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 113 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAP-SAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ 113 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCT-TSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhC-hhhhcCCccccccccccccccccCCCccccCcHH
Confidence 4689999999977 89999986445 789999999999999954 3567776543222111100 1 22344456999
Q ss_pred hHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 135 WKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 135 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
|+++|+++ .++|++++++.+.+.+.+.++++++.|. .++++|+.+.+ ..+++++|+.+ ||
T Consensus 114 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~l-~G 174 (415)
T 3mgx_A 114 HRKLRKLV-GPLLSRAAARKLAERVRIEVGDVLGRVL----DGEVCDAATAIGPRIPAAVVCEI-LG 174 (415)
T ss_dssp HHHHHHHH-GGGSSHHHHHHSHHHHHHHHHHHTTTSS----SSSCEESTTTTTTHHHHHHHHHH-HT
T ss_pred HHHHHHHh-HhhhCHHHHHHHHHHHHHHHHHHHHHHH----hcCCcchHHHHHHHHHHHHHHHH-cC
Confidence 99999999 5999999999999999999999999885 23479998776 67999999984 65
No 61
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.66 E-value=8.8e-17 Score=123.35 Aligned_cols=130 Identities=17% Similarity=0.229 Sum_probs=102.2
Q ss_pred cCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcc-----cc-c--ccccccC-Ccceeec
Q 044449 59 LGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMV-----KD-A--IFPHQHN-EFGMVLL 129 (200)
Q Consensus 59 ~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~-----~~-~--~~~~~~~-~~~~~~~ 129 (200)
+..+++..+.++ ++||||++ + ++.+.++++||+++++++.++. |++++. .. . ....... +.++++.
T Consensus 24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (419)
T 1q5d_A 24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGL 98 (419)
T ss_dssp TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS
T ss_pred hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccC
Confidence 457899999999 78999999 5 6778999999999999998653 887751 11 1 1111101 3344444
Q ss_pred cCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHH-HHHHHHHHHHHHHhcC
Q 044449 130 PVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQ-VVFNTSLNLLSNTIFS 200 (200)
Q Consensus 130 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~-~~~~~~~~vi~~~~fG 200 (200)
+|+.|+++|+++ .++|++++++.+.+.+.++++++++.|.+ ++++|+.+ ....+++|+|+.+ ||
T Consensus 99 -~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG 163 (419)
T 1q5d_A 99 -PPEDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSG----QEEFDVVRDYAEGIPMRAISAL-LK 163 (419)
T ss_dssp -CHHHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTT----SSCEETTTTTGGGSHHHHHHHH-TT
T ss_pred -CchHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH-hC
Confidence 599999999999 59999999999999999999999999962 34799875 5589999999998 87
No 62
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.65 E-value=1.9e-16 Score=122.20 Aligned_cols=129 Identities=16% Similarity=0.176 Sum_probs=92.5
Q ss_pred CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccccCCcceeeccCCcchHHHH
Q 044449 60 GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVLLPVSTTWKNLR 139 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 139 (200)
..+++.++.++ ++||||+++..++ .+++++|+++++++.+.. .|++++........ .+.+.++..+|+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~--~~~~~l~~~dg~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPV--MRGPVLAQMHGKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCS--CC-------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-cccccccccccccc--cCCCccccCCcHHHHHHH
Confidence 46888888887 6899999987655 899999999999998764 47776543322222 233334455599999999
Q ss_pred hhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeH-HHHHHHHHHHHHHHHhcC
Q 044449 140 KLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDI-SQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 140 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~-~~~~~~~~~~vi~~~~fG 200 (200)
+++ .++|++++++.+.+.+.+.++++++.|. +++.+|+ .+....+++++++. +||
T Consensus 126 r~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G 181 (441)
T 3nc3_A 126 RIV-VRSFIGDALDHLSPLIKQNAENLLAPYL----ERGKSDLVNDFGKTFAVCVTMD-MLG 181 (441)
T ss_dssp HHH-HHHHHHTHHHHHHHHHHHHHHHHHTTTT----TTTEEECCCCCHHHHHHHHHHH-HTT
T ss_pred HHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHH----hcCCCcHHHHHHHHHHHHHHHH-HcC
Confidence 999 5999999999999999999999999886 3567886 56667799999998 466
No 63
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.64 E-value=6.5e-16 Score=118.44 Aligned_cols=130 Identities=14% Similarity=0.203 Sum_probs=98.7
Q ss_pred ccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCccccccccc--------ccCCcceeec
Q 044449 58 ELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPH--------QHNEFGMVLL 129 (200)
Q Consensus 58 ~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 129 (200)
.+..+++.++.++ ++||||+++..| .++++||+++++++.+. ..+++++........ ...+.++++.
T Consensus 26 ~~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (418)
T 3r9b_A 26 ATRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFL 100 (418)
T ss_dssp GGTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGC
T ss_pred hhccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhc
Confidence 3468999999998 678999998765 89999999999999753 444444432211111 1123455544
Q ss_pred cCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHhcC
Q 044449 130 PVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDIS-QVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 130 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG 200 (200)
+|+.|+++|+++ .++|++++++.+.+.+.+.++++++ +. .++.+|+. +....+++++++. +||
T Consensus 101 -dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~-l~----~~~~~d~~~~~~~~~~~~vi~~-~~G 164 (418)
T 3r9b_A 101 -DPPDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLD-AV----DGPEFNLIDNLAYPLPVAVICR-LLG 164 (418)
T ss_dssp -CTTHHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHH-TC----CSSEEEHHHHTTTHHHHHHHHH-HHT
T ss_pred -CCchHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHh-hh----ccCCeehHHHHhCcCCHHHHHH-HcC
Confidence 499999999999 5999999999999999999999999 74 34589975 5557899999999 676
No 64
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.64 E-value=6.7e-16 Score=117.64 Aligned_cols=128 Identities=15% Similarity=0.097 Sum_probs=99.2
Q ss_pred CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccc------cccccC-CcceeeccCC
Q 044449 60 GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAI------FPHQHN-EFGMVLLPVS 132 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~g 132 (200)
..+++.++.++ ++||||++ + |.+.++++||+++++++.+ ..|++++..... ...... +.++++. +|
T Consensus 12 ~~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g 84 (397)
T 3buj_A 12 RRDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQ-DE 84 (397)
T ss_dssp HHCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGC-CT
T ss_pred ccCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccC-Cc
Confidence 35788888877 68999999 6 5789999999999999975 356655321100 011111 4455544 59
Q ss_pred cchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHhcC
Q 044449 133 TTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDIS-QVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 133 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG 200 (200)
+.|+++|+++ .++|++++++.+.+.+.++++++++.|. .++++|+. +....+++++++.+ ||
T Consensus 85 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~dl~~~~~~~~~~~vi~~~-~G 147 (397)
T 3buj_A 85 PDHGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPAL----ARGAMDVVDELAYPLALRAVLGL-LG 147 (397)
T ss_dssp THHHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHH----TTTEEEHHHHTHHHHHHHHHHHH-HT
T ss_pred hhHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHh----hcCCeehHHHHHHHhHHHHHHHH-hC
Confidence 9999999999 5999999999999999999999999997 34579986 45578999999998 77
No 65
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.62 E-value=6.7e-16 Score=117.62 Aligned_cols=129 Identities=18% Similarity=0.214 Sum_probs=100.7
Q ss_pred cCCCchHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCccc-C-Cccc--cccc--cccc-CCcceeecc
Q 044449 59 LGEKPHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFY-N-RMVK--DAIF--PHQH-NEFGMVLLP 130 (200)
Q Consensus 59 ~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~~~~~~ 130 (200)
+..+++..+.++ ++||||+++++ ++.+.++++||+++++++.++ .|+ + ++.. .... .... .+.++++.
T Consensus 14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 89 (396)
T 1n40_A 14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI- 89 (396)
T ss_dssp CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH-
T ss_pred cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH-
Confidence 457899999999 99999999997 788999999999999999754 465 4 4321 1110 1111 13444433
Q ss_pred CCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 131 VSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 131 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
.|+++|+++ .+.|+++ ++.+.+.+.++++++++.|.+ +++++|+.+.+ ..+++++++. +||
T Consensus 90 ---~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G 151 (396)
T 1n40_A 90 ---ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLIT---EGAPADLRNDFADPLATALHCK-VLG 151 (396)
T ss_dssp ---HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHH---HCSCEETTTTTHHHHHHHHHHH-HHT
T ss_pred ---HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHhHHHHHHH-HhC
Confidence 999999999 5999999 999999999999999999973 25689998555 5899999998 677
No 66
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.62 E-value=8.8e-16 Score=116.92 Aligned_cols=133 Identities=8% Similarity=0.003 Sum_probs=100.9
Q ss_pred ccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccccCCcceeeccCCcchHH
Q 044449 58 ELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVLLPVSTTWKN 137 (200)
Q Consensus 58 ~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 137 (200)
.+..+++.++.+++++ |||+++..++ +.++++||+++++++.+. +.|++++.... ..........++..+|+.|++
T Consensus 21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~~~~~~~~~~~~~~~g~~h~~ 96 (396)
T 3oft_A 21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVT-PGLGKVMQFIPLQQDGAEHKA 96 (396)
T ss_dssp TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSS-TTHHHHHCCTTTTCCHHHHHH
T ss_pred hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCC-CccccccccCccccCCcHHHH
Confidence 3457899999999999 9999998874 588999999999999654 57777653211 111111122334456999999
Q ss_pred HHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 138 LRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 138 ~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
+|+++ .++|++++++.+.+.+.+.++++++.|.+ ++.+|+...+ ..++.++++. +||
T Consensus 97 ~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G 154 (396)
T 3oft_A 97 FRTPV-MKGLASRFVVALEPKVQAVARKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LID 154 (396)
T ss_dssp HHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTT
T ss_pred HHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcC
Confidence 99999 59999999999999999999999999962 3468875544 6688888876 455
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.62 E-value=1.6e-15 Score=115.63 Aligned_cols=129 Identities=16% Similarity=0.194 Sum_probs=93.8
Q ss_pred hHHHHHHHHHhCCeEEEeec-Ce---eEEEeCCHHHHHHHHHhCCCcccCCcc------ccccccc--ccCCcceeeccC
Q 044449 64 HKSLAELAKIYGPILSLKLG-EV---TTVVVSSAPMAKYILQDHDSSFYNRMV------KDAIFPH--QHNEFGMVLLPV 131 (200)
Q Consensus 64 ~~~~~~~~~~yG~v~~~~~~-~~---~~v~v~~p~~~~~il~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~ 131 (200)
+..+.+++++ |||+++.++ |. +.++++||+++++++.++ ..|++++. ....... ...+.++++. +
T Consensus 16 ~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~ 92 (398)
T 1lfk_A 16 LDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDY-D 92 (398)
T ss_dssp TEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGGC-C
T ss_pred CChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCcccc-C
Confidence 3345557666 999999875 45 899999999999999433 34666543 1101101 1124455554 5
Q ss_pred CcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHH-HHHHHHHHHhcC
Q 044449 132 STTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFN-TSLNLLSNTIFS 200 (200)
Q Consensus 132 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~-~~~~vi~~~~fG 200 (200)
|+.|+++|+++ .+.|++++++.+.+.+.++++++++.|.+ .++++|+.+.+.. +++++++. +||
T Consensus 93 g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G 157 (398)
T 1lfk_A 93 PPEHTRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVG 157 (398)
T ss_dssp TTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHT
T ss_pred CHHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcC
Confidence 99999999999 59999999999999999999999999963 3567999998886 99999997 466
No 68
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.61 E-value=7e-15 Score=113.03 Aligned_cols=132 Identities=13% Similarity=0.060 Sum_probs=100.6
Q ss_pred CCCchHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHhCCCcccCCcc---ccccc-----c-cccCCcceeec
Q 044449 60 GEKPHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQDHDSSFYNRMV---KDAIF-----P-HQHNEFGMVLL 129 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~~~~~~~~~~~---~~~~~-----~-~~~~~~~~~~~ 129 (200)
..+++..+.+++++ |||+++.. ++.+.+++++++.+++++.+. ..|++++. ..... . ....+.++ +.
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~ 113 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNF-IA 113 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCG-GG
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcc-cc
Confidence 46799999999876 99999977 456799999999999999765 45665441 11111 0 11112333 44
Q ss_pred cCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 130 PVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 130 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
.+|+.|+++|+++ .++|++++++.+.+.+.+.++++++.|. .++++|+.+.+ ..+++++++. +||
T Consensus 114 ~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G 179 (426)
T 3rwl_A 114 MDRPRHDEQRKAV-SPIVAPANLAALEGTIRERVSKTLDGLP----VGEEFDWVDRVSIEITTQMLAT-LFD 179 (426)
T ss_dssp CCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHTSC----SSSCEEHHHHTHHHHHHHHHHH-HHT
T ss_pred cCchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhh----cCCCcchHHHHHHHHHHHHHHH-HcC
Confidence 4699999999999 5999999999999999999999999884 56789976655 7899999886 666
No 69
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.61 E-value=1.7e-15 Score=116.30 Aligned_cols=132 Identities=6% Similarity=0.003 Sum_probs=99.8
Q ss_pred CCCchHHHHHHHHHhC-CeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccccCCcceeeccCCcchHHH
Q 044449 60 GEKPHKSLAELAKIYG-PILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVLLPVSTTWKNL 138 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 138 (200)
..+++.++.++++++| ||+++..++ +.++++||+.+++++. +...|++++...........+.++ +..+|+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~-~~~dg~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYDMVP-TKLDPPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCCCTT-TTCCTTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccccccCC-ccCCcHHHHHH
Confidence 4689999999987765 899998766 5899999999999995 446787765322111111112333 44459999999
Q ss_pred HhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHH-HHHHHHHHHHHHHHhcC
Q 044449 139 RKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDIS-QVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 139 R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG 200 (200)
|+++ .++|++++++.+.+.+.+.++++++.|. .++.+|+. +....++.++++.+ ||
T Consensus 114 R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~~v~~~~-~G 170 (421)
T 3lxh_A 114 RKAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFA----DRGHCEFGSEFSTVFPVRVFLAL-AG 170 (421)
T ss_dssp HHHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTT----TTSEEEHHHHTTTTHHHHHHHHH-HT
T ss_pred HHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHh----hcCCeehHHHHHHHHHHHHHHHH-cC
Confidence 9999 5999999999999999999999999986 34578975 45567888888864 55
No 70
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.61 E-value=3.5e-15 Score=112.58 Aligned_cols=124 Identities=18% Similarity=0.241 Sum_probs=95.9
Q ss_pred chHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcc-----cccc--cc--ccc-CCcceeeccCC
Q 044449 63 PHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMV-----KDAI--FP--HQH-NEFGMVLLPVS 132 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~-----~~~~--~~--~~~-~~~~~~~~~~g 132 (200)
++..+.++ ++||||+++ | +.++++|++++++++.+. ..|++++. .... .. ... .|.++++. +|
T Consensus 1 p~~~~~~l-r~~Gpv~~~---g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~g 73 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD---G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTS-DP 73 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC---S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGC-CT
T ss_pred CCHHHHHH-HhcCCeEeE---C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccC-CC
Confidence 45677788 589999987 3 589999999999999864 46877753 1100 01 111 12445444 59
Q ss_pred cchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 133 TTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 133 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
+.|+++|+++ .++|++++++.+.+.+.+.++++++.| + .+ ++|+.+.+ ..+++|+|+.+ ||
T Consensus 74 ~~h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l-~---~g-~~d~~~~~~~~~~~~vi~~~-~G 135 (368)
T 1io7_A 74 PLHDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSI-D---PR-EDDIVKKLAVPLPIIVISKI-LG 135 (368)
T ss_dssp THHHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTC-C---TT-SEEHHHHTTTHHHHHHHHHH-HT
T ss_pred hHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHh-h---cC-CccHHHHHHHHHHHHHHHHH-hC
Confidence 9999999999 599999999999999999999999998 3 23 69998866 78999999998 87
No 71
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.54 E-value=2.2e-14 Score=108.15 Aligned_cols=121 Identities=15% Similarity=0.209 Sum_probs=92.1
Q ss_pred chHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcc-cc-cc-----c-ccccC--CcceeeccCC
Q 044449 63 PHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMV-KD-AI-----F-PHQHN--EFGMVLLPVS 132 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~-~~-~~-----~-~~~~~--~~~~~~~~~g 132 (200)
++..+.++ ++||||+++. | .++++||+++++++.++ ..|++++. .. .. . ..... +.++++. +|
T Consensus 1 p~~~~~~l-r~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg 73 (367)
T 3b4x_A 1 MYDWFKQM-RKESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS-DP 73 (367)
T ss_dssp CHHHHHHH-HHHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC-CT
T ss_pred CCHHHHHH-HHcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccC-Cc
Confidence 35677777 5799999987 3 79999999999999865 46777642 11 11 1 11110 2555555 59
Q ss_pred cchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 133 TTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 133 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
+.|+++|+++ .++|++++++. +.+.+.++++++.|. + .+|+.+.+ ..+++|+|+. +||
T Consensus 74 ~~h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G 132 (367)
T 3b4x_A 74 PLHDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLG 132 (367)
T ss_dssp THHHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHT
T ss_pred hhHHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcC
Confidence 9999999999 59999999988 889999999998884 3 49998655 8999999999 677
No 72
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.54 E-value=7e-15 Score=109.95 Aligned_cols=110 Identities=13% Similarity=0.206 Sum_probs=87.6
Q ss_pred HHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccccCCcceeeccCCcchHHHHhhhhhcccchhh
Q 044449 72 KIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQK 151 (200)
Q Consensus 72 ~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~ 151 (200)
++||||+++ | .++++||+++++++.++ ..|++++..... ...+.++++. +|+.|+++|+++ .++|++++
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~---~~~~~~l~~~-~g~~~~~~R~~~-~~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYS---NAGGISFITM-DNPEHKEFRDIS-APYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGGGC-CHHHHHHHHHHH-HHHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCC---CccccccccC-CchHHHHHHHHh-hhhcCHHH
Confidence 689999986 3 89999999999999865 468776521111 1124555554 599999999999 59999999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHH-HHHHHHHHHHHhcC
Q 044449 152 LDANQELRRKKIKNLLSYVEENCRAGKAIDISQVV-FNTSLNLLSNTIFS 200 (200)
Q Consensus 152 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 200 (200)
++.+.+.+.++++++++.|. ++|+.+.+ ..+++|+++.+ ||
T Consensus 71 l~~~~~~i~~~~~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G 112 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID-------NKDIISEYAVRLPVNIISKI-LG 112 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHHHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cC
Confidence 99999999999999998884 68998755 89999999998 87
No 73
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.53 E-value=2.3e-14 Score=109.12 Aligned_cols=129 Identities=18% Similarity=0.107 Sum_probs=98.8
Q ss_pred CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccccCCcceeeccCCcchHHHH
Q 044449 60 GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVLLPVSTTWKNLR 139 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 139 (200)
..+++..+.+++++ |||+++..| .+++++++.+++++.+. .|+.++...........+.++ +..+|+.|+++|
T Consensus 19 ~~dp~~~~~~lr~~-~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~R 91 (394)
T 2wiy_A 19 RNNPYPWYRRLQQD-HPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTA-LGSDPPHHTVLR 91 (394)
T ss_dssp HHCCHHHHHHHHHH-CSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSG-GGCCTTHHHHHH
T ss_pred ccCccHHHHHHHhc-CCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccchhccccc-ccCCchHHHHHH
Confidence 35788999888665 899987543 68999999999999643 455443211111111113344 445699999999
Q ss_pred hhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHHHHHHHHHhcC
Q 044449 140 KLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 140 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG 200 (200)
+++ .++|++++++.+.+.+.+.++++++.+. .++++|+.+.+..+++++++..+||
T Consensus 92 ~~~-~~~fs~~~~~~~~~~i~~~~~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G 147 (394)
T 2wiy_A 92 RQT-NKWFTPKLVDGWVRTTRELVGDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQ 147 (394)
T ss_dssp HHH-HTTCSHHHHHHHTHHHHHHHHHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHT
T ss_pred HHH-HhccCHHHHHHHHHHHHHHHHHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcC
Confidence 999 5999999999999999999999998885 4567999999999999999998887
No 74
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.46 E-value=2.2e-13 Score=104.20 Aligned_cols=143 Identities=13% Similarity=0.142 Sum_probs=102.2
Q ss_pred CCcccccc---ccccCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccc---ccccc
Q 044449 48 TPYPVIGN---LLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAI---FPHQH 121 (200)
Q Consensus 48 ~~~p~~g~---~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~---~~~~~ 121 (200)
.++|.++- ...+..|++.+++++++ +|||+++ ++.+.++|++++++++++.+. ..|+........ .....
T Consensus 18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~ 93 (412)
T 4dnj_A 18 AGVPHLGIDPFALDYFADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKKEKPW 93 (412)
T ss_dssp TTSCEECCCTTSHHHHHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTTSCCS
T ss_pred CCCCccCCCCCCHHHHhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCC-ccccCCCccccccccccccc
Confidence 34666652 23345789999998865 6999865 456789999999999999754 445443221111 11111
Q ss_pred CCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeH-HHHHHHHHHHHHHHHh
Q 044449 122 NEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDI-SQVVFNTSLNLLSNTI 198 (200)
Q Consensus 122 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~-~~~~~~~~~~vi~~~~ 198 (200)
...+.++..||+.|+++|+++ +++|++++++++.+.+.+.++++++.+.. .++.+|+ .++...+++++++.+.
T Consensus 94 ~~~~~~~~~Dg~~H~r~R~~~-~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~---~~~~~D~v~~~~~~~~~~~i~~l~ 167 (412)
T 4dnj_A 94 RPPSLILEADPPAHTRTRAVL-SKVLSPATMKRLRDGFAAAADAKIDELLA---RGGNIDAIADLAEAYPLSVFPDAM 167 (412)
T ss_dssp SCCCTTTTCCTTHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHHH---TTSEEETCCCCCCHHHHHHHHHHH
T ss_pred cCCCccccCChHHHHHHHhhc-ccccCHHHHHHhhHHHHHHHHHHHHhhhc---cCCCceeHHHHHhhhhHhHHHHHc
Confidence 233444555699999999999 59999999999999999999999999853 4556774 6677778888888764
No 75
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.45 E-value=2.8e-14 Score=109.33 Aligned_cols=128 Identities=13% Similarity=0.079 Sum_probs=93.4
Q ss_pred CCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccc--ccc----cc-ccCCcceeeccCC
Q 044449 60 GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKD--AIF----PH-QHNEFGMVLLPVS 132 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~--~~~----~~-~~~~~~~~~~~~g 132 (200)
..+++.+ . ..++|||++++..++.. +++++++++++++.+.. |....... ... .. ...+.++ +..+|
T Consensus 32 ~~~P~~~-~-~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg 105 (416)
T 3p3o_A 32 PNFSWDS-P-EVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFL-QSLDG 105 (416)
T ss_dssp TTCCTTS-H-HHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSG-GGCCH
T ss_pred ccCCchH-H-HHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCcc-ccCCc
Confidence 5678888 4 44679999999886666 99999999999997653 33221100 000 00 0012334 44459
Q ss_pred cchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeH-HHHHHHHHHHHHHHHhcC
Q 044449 133 TTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDI-SQVVFNTSLNLLSNTIFS 200 (200)
Q Consensus 133 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~-~~~~~~~~~~vi~~~~fG 200 (200)
+.|+++|+++ .++|++++++.+.+.+.+.++++++.+ + ++.+|+ .+....+++++|+.+ ||
T Consensus 106 ~~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l-~----~g~~d~~~~~~~~~~~~vi~~l-~G 167 (416)
T 3p3o_A 106 ADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKL-P----QGDFDFVQHFPHPLPALVMCQL-LG 167 (416)
T ss_dssp HHHHHHHHTT-CGGGSHHHHHHHHHHHHHHHHHHHHTC-C----SSSEEHHHHTTTHHHHHHHHHH-HT
T ss_pred hHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhh-c----cCCccHHHHHHHHHHHHHHHHH-hC
Confidence 9999999999 599999999999999999999999988 2 234995 555667999999984 55
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.25 E-value=9.3e-11 Score=89.84 Aligned_cols=130 Identities=8% Similarity=0.006 Sum_probs=93.4
Q ss_pred CCCchHHHHHHHHHhC-CeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccccccccccCCcceeeccCCcchHHH
Q 044449 60 GEKPHKSLAELAKIYG-PILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVLLPVSTTWKNL 138 (200)
Q Consensus 60 ~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 138 (200)
..+++..+.++++..+ +++..-.+| ..++|++++.+++++.+. ..|+......... ........+...|+++|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~-~~~~~~~~~~~~D~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDP-TRFSSEVIFLPKE-AGEKAQMVPTKMDPPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEESSCCSSSTT-SSCSSCTTTTTCCTTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCc-hhccCCCcccccc-cccccccCcccCCcHHHHHH
Confidence 4678888888877654 465543333 678999999999999753 4576543322111 11123333444469999999
Q ss_pred HhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeH-HHHHHHHHHHHHHHH
Q 044449 139 RKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDI-SQVVFNTSLNLLSNT 197 (200)
Q Consensus 139 R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~-~~~~~~~~~~vi~~~ 197 (200)
|+++ +++|++++++++.+.|++.++++++.+. .++++|+ .+....+++.+++..
T Consensus 113 Rrll-~~~Fs~~~l~~~~~~i~~~~~~lld~l~----~~g~~D~v~~~a~~l~~~vi~~l 167 (417)
T 4dxy_A 113 RKAL-DKGLNLAKIRKVEDKVREVASSLIDSFA----ARGECDFAAEYAELFPVHVFMAL 167 (417)
T ss_dssp HHHH-HHHHCHHHHHTTHHHHHHHHHHHHHHHH----TTSEEEHHHHTTTTHHHHHHHHH
T ss_pred HHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHhh----hcCCeeeHHHHHhhhHHHHHHHH
Confidence 9999 5999999999999999999999999997 4567886 455566777777764
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.59 E-value=1.3e-10 Score=87.72 Aligned_cols=128 Identities=13% Similarity=0.169 Sum_probs=83.6
Q ss_pred CCC-CCCccccccccc-----cCCCchHHHHHHHHHhCCeEEEeecCeeEEEeCCHHHHHHHHHhCCCcccCCcccc-cc
Q 044449 44 PPG-PTPYPVIGNLLE-----LGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKD-AI 116 (200)
Q Consensus 44 ~p~-p~~~p~~g~~~~-----~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~~~~il~~~~~~~~~~~~~~-~~ 116 (200)
||| ++++|++|+... +..+++.++.+++++ ||++.. .+.+++++++.+++++.+ ..|++++... ..
T Consensus 36 ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~~ 108 (381)
T 2yjn_B 36 IRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRTPEW 108 (381)
T ss_dssp HHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCCHH
T ss_pred CCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCccccccc
Confidence 455 446799997644 356899999999876 998864 468999999999999986 3576653211 00
Q ss_pred -----cccccCCcceeeccCCcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHH-HHHHH
Q 044449 117 -----FPHQHNEFGMVLLPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQV-VFNTS 190 (200)
Q Consensus 117 -----~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~-~~~~~ 190 (200)
......+.++++.+ |+.| . ++|+ + .+.+++.++++++.|. +++|+.+. ...++
T Consensus 109 ~~~~~~~~~~~~~~l~~~d-g~~H-------~-~~Ft-----~-~~~i~~~~~~ll~~~~------g~~Dl~~~~a~~l~ 167 (381)
T 2yjn_B 109 MRAAGAPPAEWAQPFRDVH-AASW-------E-GEVP-----D-VGELAESFAGLLPGAG------ARLDLVGDFAWQVP 167 (381)
T ss_dssp HHHHTCCHHHHTHHHHHHH-HCCC-------C-SCCC-----C-CSCHHHHTSTTSCC------------CCCCCCTHHH
T ss_pred ccccccccchhhhhhhhCC-chhh-------h-hccC-----C-hHHHHHHHHHHHHhcc------CcchHHHHHHHHHH
Confidence 00110133455544 8999 3 7887 2 5778888888888884 36888755 47999
Q ss_pred HHHHHHHhcC
Q 044449 191 LNLLSNTIFS 200 (200)
Q Consensus 191 ~~vi~~~~fG 200 (200)
+++|+++ ||
T Consensus 168 ~~vi~~l-~G 176 (381)
T 2yjn_B 168 VQGMTAV-LG 176 (381)
T ss_dssp HHHHHTC---
T ss_pred HHHHHHH-cC
Confidence 9999985 76
No 78
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=75.41 E-value=8.2 Score=21.27 Aligned_cols=38 Identities=11% Similarity=0.046 Sum_probs=29.6
Q ss_pred hHHHHHHHHHhCCeEEEeec-------CeeEEEeCCHHHHHHHHH
Q 044449 64 HKSLAELAKIYGPILSLKLG-------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 64 ~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~~~~il~ 101 (200)
.+.+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 21 ~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~ 65 (81)
T 2krb_A 21 KNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK 65 (81)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHH
Confidence 46678888999999888765 345667789998888875
No 79
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.15 E-value=3.8 Score=24.13 Aligned_cols=59 Identities=15% Similarity=0.169 Sum_probs=39.8
Q ss_pred ccccccccC--CCchHHHHHHHHHhC-CeEEEeecCeeEEEeCCHHHHHHHHHh-CCCcccCCc
Q 044449 52 VIGNLLELG--EKPHKSLAELAKIYG-PILSLKLGEVTTVVVSSAPMAKYILQD-HDSSFYNRM 111 (200)
Q Consensus 52 ~~g~~~~~~--~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~~p~~~~~il~~-~~~~~~~~~ 111 (200)
+++|+..-. ......+.++..+|| +|..+ .+|.-.|...+.+.++..+.+ ++..+-.++
T Consensus 13 YV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~ 75 (96)
T 2diu_A 13 YVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR 75 (96)
T ss_dssp EEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred EEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence 466665541 122345778999995 99998 568999999999998777743 333443443
No 80
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=66.67 E-value=17 Score=21.32 Aligned_cols=41 Identities=20% Similarity=0.232 Sum_probs=31.0
Q ss_pred chHHHHHHHHHhCCeEEEeec--------CeeEEEeCCHHHHHHHHHhC
Q 044449 63 PHKSLAELAKIYGPILSLKLG--------EVTTVVVSSAPMAKYILQDH 103 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~~~~il~~~ 103 (200)
....+.++..+||+|..+.+. |.-.|...+++.++..+..+
T Consensus 24 te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~ 72 (103)
T 1s79_A 24 TLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 72 (103)
T ss_dssp CHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSS
T ss_pred CHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcC
Confidence 446678888999999887764 34567778999998888643
No 81
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=62.19 E-value=16 Score=19.49 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=29.7
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHhC
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQDH 103 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~~ 103 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..+
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 12 PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 345678888999998887663 23456678888888888643
No 82
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=61.69 E-value=22 Score=20.93 Aligned_cols=47 Identities=19% Similarity=0.246 Sum_probs=31.0
Q ss_pred HHHHHHHHHhCCeEEEeec-----------CeeEEEeCCHHHHHHHHHh-CCCcccCCc
Q 044449 65 KSLAELAKIYGPILSLKLG-----------EVTTVVVSSAPMAKYILQD-HDSSFYNRM 111 (200)
Q Consensus 65 ~~~~~~~~~yG~v~~~~~~-----------~~~~v~v~~p~~~~~il~~-~~~~~~~~~ 111 (200)
+-+.+...+||+|..+.+. |.-.|-..+++.++..... ++..|..|.
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~GR~ 88 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRV 88 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCCCE
Confidence 4566677899999998874 2345667888877666533 455555543
No 83
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=58.14 E-value=25 Score=20.44 Aligned_cols=53 Identities=13% Similarity=0.135 Sum_probs=36.5
Q ss_pred ccccccccccCCC----chHHHHHHHHHhCCeEEEeec-------CeeEEEeCCHHHHHHHHHh
Q 044449 50 YPVIGNLLELGEK----PHKSLAELAKIYGPILSLKLG-------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 50 ~p~~g~~~~~~~~----~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~~~~il~~ 102 (200)
.-++|++..-..+ ....+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 3456666543222 346788888999999988775 4456667888878777754
No 84
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=57.74 E-value=23 Score=19.93 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=34.3
Q ss_pred CccccccccccCCCchHHHHHHHHHhCCeEEEeec----CeeEEEeCCHHHHHHH
Q 044449 49 PYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG----EVTTVVVSSAPMAKYI 99 (200)
Q Consensus 49 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~v~v~~p~~~~~i 99 (200)
..-++|++..- -..+.+.++..+||+|..+.+. |.-.|-..+++.++++
T Consensus 12 ~~l~V~~Lp~~--~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 12 SKVFVGRCTED--MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp CEEEEESCCTT--CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 34455655432 3446678888999999998875 4567778999988854
No 85
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=57.26 E-value=30 Score=20.98 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=38.7
Q ss_pred Ccccccccccc---CCCchHHHHHHHHHhCCeEEEeecC-------------eeEEEeCCHHHHHHHHHh-CCCcccCCc
Q 044449 49 PYPVIGNLLEL---GEKPHKSLAELAKIYGPILSLKLGE-------------VTTVVVSSAPMAKYILQD-HDSSFYNRM 111 (200)
Q Consensus 49 ~~p~~g~~~~~---~~~~~~~~~~~~~~yG~v~~~~~~~-------------~~~v~v~~p~~~~~il~~-~~~~~~~~~ 111 (200)
..=.+.|+..- ..+..+-+.+...+||+|..+.+.. .-.|-..+++.++..... ++..|..|.
T Consensus 21 ~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~GR~ 100 (118)
T 3ue2_A 21 TVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRK 100 (118)
T ss_dssp CEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECCcE
Confidence 34455555433 3456667777888999998876632 234455788877666543 555665554
No 86
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=56.85 E-value=28 Score=20.52 Aligned_cols=64 Identities=17% Similarity=0.144 Sum_probs=37.2
Q ss_pred CCCccccccccc---cCCCchHHHHHHHHHhCCeEEEeec----------CeeEEEeCCHHHHHHHHHh-CCCcccCC
Q 044449 47 PTPYPVIGNLLE---LGEKPHKSLAELAKIYGPILSLKLG----------EVTTVVVSSAPMAKYILQD-HDSSFYNR 110 (200)
Q Consensus 47 p~~~p~~g~~~~---~~~~~~~~~~~~~~~yG~v~~~~~~----------~~~~v~v~~p~~~~~il~~-~~~~~~~~ 110 (200)
|...-++.|+.. +..+..+-+.+...+||+|..+.+. |.-.|-..+++.+...... ++..|..+
T Consensus 7 ~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~Gr 84 (105)
T 2pe8_A 7 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGR 84 (105)
T ss_dssp CCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 333445555542 2234566777888999998887653 1234556788877666543 45555544
No 87
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=56.77 E-value=28 Score=20.56 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=30.0
Q ss_pred chHHHHHHHHHhCCeEEEeecC-eeEEEeCCHHHHHHHHH
Q 044449 63 PHKSLAELAKIYGPILSLKLGE-VTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~~-~~~v~v~~p~~~~~il~ 101 (200)
-..-+.++.+.||.+.--|+-. .-.+++.+|+.+++++.
T Consensus 28 Kt~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 28 KTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp CHHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred hhHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 3456778888999766656644 47778899999999987
No 88
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=56.01 E-value=14 Score=22.31 Aligned_cols=67 Identities=15% Similarity=0.149 Sum_probs=38.4
Q ss_pred CCCCCCccccccccccCC--------CchHHHHHHHHHhCCeEEEeec-----CeeEEEeCCHHHHHHHHHh-CCCcccC
Q 044449 44 PPGPTPYPVIGNLLELGE--------KPHKSLAELAKIYGPILSLKLG-----EVTTVVVSSAPMAKYILQD-HDSSFYN 109 (200)
Q Consensus 44 ~p~p~~~p~~g~~~~~~~--------~~~~~~~~~~~~yG~v~~~~~~-----~~~~v~v~~p~~~~~il~~-~~~~~~~ 109 (200)
+|.|..+=.+.|+..... +..+-+.+...+||.|..+.+. |.-.|-..+++.++..... ++..|..
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~G 82 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAG 82 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 455555555555544411 1223345566789999888763 3455666788877666543 4555554
Q ss_pred C
Q 044449 110 R 110 (200)
Q Consensus 110 ~ 110 (200)
+
T Consensus 83 R 83 (114)
T 3s6e_A 83 K 83 (114)
T ss_dssp E
T ss_pred E
Confidence 4
No 89
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=55.86 E-value=29 Score=20.45 Aligned_cols=57 Identities=26% Similarity=0.327 Sum_probs=38.7
Q ss_pred CCCCCCCccccccccccCCCchHHHHHHHHHhCCeEEEeec------CeeEEEeCCHHHHHHHHH
Q 044449 43 LPPGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 43 ~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~v~v~~p~~~~~il~ 101 (200)
.+|.|...-++|++..- -....+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 3 ~~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 44555555566666432 3445678888999999888762 346677788888877765
No 90
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=51.70 E-value=39 Score=20.71 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCeEEEeec------CeeEEEeCCHHHHHHHHHh
Q 044449 66 SLAELAKIYGPILSLKLG------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 66 ~~~~~~~~yG~v~~~~~~------~~~~v~v~~p~~~~~il~~ 102 (200)
.+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 49 ~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 49 LLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp HHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred HHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 456788999999887663 3467777888888777753
No 91
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=50.79 E-value=27 Score=18.56 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=28.9
Q ss_pred chHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+.. .-.|-..+++.++..+.-
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 60 (75)
T 2mss_A 12 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 60 (75)
T ss_dssp CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSS
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHC
Confidence 3456778889999988876632 345666889988888753
No 92
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=46.78 E-value=35 Score=18.75 Aligned_cols=51 Identities=14% Similarity=0.285 Sum_probs=33.6
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHhC
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQDH 103 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~~ 103 (200)
-++|++.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+...
T Consensus 14 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 14 MFVGGLSW--DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEEECCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 34555543 23456678888999998887653 12456668888888887543
No 93
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.27 E-value=52 Score=19.16 Aligned_cols=40 Identities=25% Similarity=0.391 Sum_probs=31.3
Q ss_pred chHHHHHHHHHhCCeEEEeec----CeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLG----EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~----~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 356788899999999888774 3456777899988888765
No 94
>3fgx_A Rbstp2171; structural genomics, PSI-2, Pro structure initiative, midwest center for structural genomic structural genomics; 2.90A {Bacillus stearothermophilus}
Probab=40.31 E-value=22 Score=21.56 Aligned_cols=16 Identities=25% Similarity=0.627 Sum_probs=13.3
Q ss_pred HHHHHHHhCCeEEEee
Q 044449 67 LAELAKIYGPILSLKL 82 (200)
Q Consensus 67 ~~~~~~~yG~v~~~~~ 82 (200)
-+++.+|||.+|++.+
T Consensus 10 ~~~lk~kygk~y~v~~ 25 (114)
T 3fgx_A 10 TDELKQKYGRVYEIRI 25 (114)
T ss_dssp HHHHHHHHSSEEEEEE
T ss_pred HHHHHHHhCceEEEEe
Confidence 4678999999999854
No 95
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=40.07 E-value=50 Score=18.55 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=28.2
Q ss_pred HHHHHHHHhCCeEEEeec------CeeEEEeCCHHHHHHHHHh
Q 044449 66 SLAELAKIYGPILSLKLG------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 66 ~~~~~~~~yG~v~~~~~~------~~~~v~v~~p~~~~~il~~ 102 (200)
.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 28 ~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 28 SLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp HHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 344888999999888764 4567778899988887753
No 96
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=39.65 E-value=58 Score=19.24 Aligned_cols=57 Identities=12% Similarity=0.145 Sum_probs=37.4
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec--CeeEEEeCCHHHHHHHHHh-CCCcccC
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG--EVTTVVVSSAPMAKYILQD-HDSSFYN 109 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--~~~~v~v~~p~~~~~il~~-~~~~~~~ 109 (200)
-+++++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.+++.+.. +...+..
T Consensus 19 l~V~nLp~~--~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 78 (115)
T 3beg_B 19 VVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 78 (115)
T ss_dssp EEEEECCSS--CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCC
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 345555432 2345677888999999888774 4567777899888877753 3334433
No 97
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.45 E-value=54 Score=18.24 Aligned_cols=55 Identities=20% Similarity=0.186 Sum_probs=35.5
Q ss_pred CCCCccccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 46 GPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 46 ~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
.|...-+++++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 13 ~~~~~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 13 DPNCCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CGGGCEEEESCCSS--CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 33333445555432 3446688888999999887663 1245666899988888763
No 98
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=36.45 E-value=68 Score=19.06 Aligned_cols=45 Identities=9% Similarity=0.086 Sum_probs=31.0
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHhCCCcc
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQDHDSSF 107 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~~~~~~ 107 (200)
..+.+.++..+||+|..+.+. |.-.|-..+.+.++..+.-++..+
T Consensus 49 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~ 102 (124)
T 2jwn_A 49 TAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVF 102 (124)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEE
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeE
Confidence 456678888999998877652 234566789998888873333333
No 99
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.07 E-value=60 Score=18.36 Aligned_cols=50 Identities=20% Similarity=0.192 Sum_probs=33.5
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec--------CeeEEEeCCHHHHHHHHHh
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG--------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~~~~il~~ 102 (200)
-+++++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 20 l~v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 20 LFISGLPF--SCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp EEEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 34455433 23445678888999998887663 2356667899988888753
No 100
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=35.70 E-value=72 Score=19.15 Aligned_cols=41 Identities=15% Similarity=0.175 Sum_probs=30.0
Q ss_pred CchHHHHHHHHHhCCeEEEeec---CeeEEEeCCHHHHHHHHHh
Q 044449 62 KPHKSLAELAKIYGPILSLKLG---EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 62 ~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~~~~il~~ 102 (200)
-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 49 ~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 49 MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3456778888999998877664 4566677888888777643
No 101
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.08 E-value=62 Score=18.24 Aligned_cols=35 Identities=20% Similarity=0.096 Sum_probs=26.8
Q ss_pred HHHHHHHhCCeEEEeec------CeeEEEeCCHHHHHHHHH
Q 044449 67 LAELAKIYGPILSLKLG------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 67 ~~~~~~~yG~v~~~~~~------~~~~v~v~~p~~~~~il~ 101 (200)
+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 30 l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 30 LQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp HHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred HHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 34888999999988774 335677789988887775
No 102
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=34.82 E-value=22 Score=21.09 Aligned_cols=48 Identities=17% Similarity=0.173 Sum_probs=33.4
Q ss_pred hHHHHHHHHHhCCeEEEeecC-eeEEEeCCHHHHHHHHHh--CCCcccCCc
Q 044449 64 HKSLAELAKIYGPILSLKLGE-VTTVVVSSAPMAKYILQD--HDSSFYNRM 111 (200)
Q Consensus 64 ~~~~~~~~~~yG~v~~~~~~~-~~~v~v~~p~~~~~il~~--~~~~~~~~~ 111 (200)
..-+.++...||++.--|+-. .-.+++.+|+.+++++.. ....|.-+.
T Consensus 19 t~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~i~~~~~y~i~t 69 (101)
T 3ctr_A 19 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNTSKYAESYRIQT 69 (101)
T ss_dssp HHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHHHTTCSSCCCCC
T ss_pred hHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHhcccCCceEEEE
Confidence 445677778888776667655 477788999999999973 234444443
No 103
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.61 E-value=75 Score=18.76 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=37.6
Q ss_pred CCCCCccccccccccCCCchHHHHHHHHHhCCeEEEeec---CeeEEEeCCHHHHHHHHH
Q 044449 45 PGPTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 45 p~p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~~~~il~ 101 (200)
|.|...-++|++..- -..+.+.++..+||+|..+.+. |.-.|-..+++.++....
T Consensus 13 ~~~~~~LfV~nLp~~--vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 13 GVPSRVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCCCCEEEECSCCTT--SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 334444556666442 2345678899999999888764 456777788888877765
No 104
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=33.45 E-value=75 Score=18.70 Aligned_cols=49 Identities=24% Similarity=0.239 Sum_probs=33.5
Q ss_pred ccccccccCCCchHHHHHHHHHhCCeEEEeec-------CeeEEEeCCHHHHHHHHHh
Q 044449 52 VIGNLLELGEKPHKSLAELAKIYGPILSLKLG-------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~~~~il~~ 102 (200)
++|++.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 9 fV~nLp~--~~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 9 FIKNLDK--SIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEESCCT--TCCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCC--CCCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 4455533 22346788888999999877653 2356777999998887754
No 105
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=33.41 E-value=66 Score=18.05 Aligned_cols=49 Identities=20% Similarity=0.153 Sum_probs=33.1
Q ss_pred ccccccccCCCchHHHHHHHHHhCCeEEEeec------------CeeEEEeCCHHHHHHHHHh
Q 044449 52 VIGNLLELGEKPHKSLAELAKIYGPILSLKLG------------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------------~~~~v~v~~p~~~~~il~~ 102 (200)
++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 9 ~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 9 FIKNLNF--STTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 4455432 23446678888999998877664 2345667899999888864
No 106
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=33.10 E-value=1e+02 Score=20.70 Aligned_cols=57 Identities=21% Similarity=0.257 Sum_probs=35.7
Q ss_pred CcchHHHHhhhhhcccchhhHhhhHHHHHHHHHHHHHHHHHHhhCC-CceeHHHHHHHH
Q 044449 132 STTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAG-KAIDISQVVFNT 189 (200)
Q Consensus 132 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~-~~~d~~~~~~~~ 189 (200)
...|.+++..+ +.-|++.++......-..+++.-.+.+.+.-.++ ...|+.+++..+
T Consensus 110 ~~k~q~~~~~l-s~~~sp~~L~~~L~~a~~e~eeeS~~l~~~F~~~~~e~dv~~Fl~~y 167 (192)
T 2p22_C 110 VASWQDYHSEF-SKKYGDIALKKKLEQNTKKLDEESSQLETTTRSIDSADDLDQFIKNY 167 (192)
T ss_dssp HHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchHHHHHHHH
Confidence 34555665677 5789999887655555566666666664322222 357888877654
No 107
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.98 E-value=74 Score=18.55 Aligned_cols=42 Identities=7% Similarity=0.104 Sum_probs=29.0
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHhCC
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQDHD 104 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~~~ 104 (200)
....+.++..+||.|..+.+. |.-.|-..+++.++..+.-+.
T Consensus 38 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g 88 (114)
T 2cq4_A 38 RPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTG 88 (114)
T ss_dssp CHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTT
T ss_pred CHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCC
Confidence 345678888999999888774 234566678887777663333
No 108
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.94 E-value=71 Score=18.25 Aligned_cols=56 Identities=13% Similarity=0.160 Sum_probs=35.8
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHhCCCccc
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQDHDSSFY 108 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~~~~~~~ 108 (200)
-+++++.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++..+..+...+.
T Consensus 19 l~V~nlp~--~~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~~~ 83 (105)
T 2dh8_A 19 LFVGGLDW--STTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLD 83 (105)
T ss_dssp ECCBSCCT--TCCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEEET
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCeEC
Confidence 34455533 234466788889999988776532 245667888888888765433343
No 109
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=32.33 E-value=86 Score=20.71 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=30.9
Q ss_pred CchHHHHHHHHHhCCeEEEeec--------CeeEEEeCCHHHHHHHHHhC
Q 044449 62 KPHKSLAELAKIYGPILSLKLG--------EVTTVVVSSAPMAKYILQDH 103 (200)
Q Consensus 62 ~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~~~~il~~~ 103 (200)
-....+.++..+||+|..+.+. |.-.|-..+++.++..+...
T Consensus 121 ~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~ 170 (193)
T 2voo_A 121 ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 170 (193)
T ss_dssp CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCT
T ss_pred CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhC
Confidence 3456788888999998877653 34556678999998888643
No 110
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.09 E-value=59 Score=18.94 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=28.9
Q ss_pred chHHHHHHHHHhCCeEEEeec-------CeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLG-------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 42 te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~ 88 (109)
T 2err_A 42 RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 88 (109)
T ss_dssp CHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHH
Confidence 446678888999998777663 3456667888888777753
No 111
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.00 E-value=71 Score=17.99 Aligned_cols=57 Identities=11% Similarity=0.123 Sum_probs=36.7
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHhCCCcccC
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQDHDSSFYN 109 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~~~~~~~~ 109 (200)
-++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.-+...+..
T Consensus 13 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g 78 (99)
T 2dgs_A 13 IFVGGIPH--NCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMG 78 (99)
T ss_dssp EEEESCCS--SCCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSS
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECC
Confidence 34455432 23445678888999999887763 23566778999888887644444433
No 112
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=31.89 E-value=77 Score=18.33 Aligned_cols=50 Identities=12% Similarity=0.112 Sum_probs=35.5
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec--CeeEEEeCCHHHHHHHHHh
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG--EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--~~~~v~v~~p~~~~~il~~ 102 (200)
-+++++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 18 l~V~nLp~--~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPP--SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCS--SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 34455542 23456678888999999887764 5677778899988888764
No 113
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=31.89 E-value=48 Score=19.40 Aligned_cols=58 Identities=14% Similarity=0.076 Sum_probs=35.5
Q ss_pred cccccccccCCCchHHHH---HHHHHhCCeEEEeec------------CeeEEEeCCHHHHHHHHHh-CCCcccCC
Q 044449 51 PVIGNLLELGEKPHKSLA---ELAKIYGPILSLKLG------------EVTTVVVSSAPMAKYILQD-HDSSFYNR 110 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~---~~~~~yG~v~~~~~~------------~~~~v~v~~p~~~~~il~~-~~~~~~~~ 110 (200)
-++|++..- -..+.+. ++..+||+|..+.+. |.-.|-..+++.++..+.. +...+..+
T Consensus 18 l~V~nLp~~--~~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~gr 91 (111)
T 2cpi_A 18 VFVVGLSQR--LADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGR 91 (111)
T ss_dssp EEEEEECTT--TCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred EEEECCCCC--CCHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEECCE
Confidence 345555432 2233455 777899999887664 2445667889888888764 44444433
No 114
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=31.88 E-value=80 Score=18.53 Aligned_cols=50 Identities=16% Similarity=0.269 Sum_probs=34.1
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
-++|++.. .-..+.+.++..+||+|..+.+. |.-.|...+++.++..+..
T Consensus 9 lfV~nL~~--~~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 9 VTFARLND--NVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEECCCC--CCCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 34555542 23456688888999999887663 1246777899988888753
No 115
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=31.63 E-value=80 Score=18.43 Aligned_cols=54 Identities=11% Similarity=0.060 Sum_probs=36.2
Q ss_pred CCCccccccccccCCCchHHHHHHHHHhCCeEEEeecC---eeEEEeCCHHHHHHHHH
Q 044449 47 PTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLGE---VTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 47 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---~~~v~v~~p~~~~~il~ 101 (200)
|...=++|++..- .-....+.++..+||.|..+.+.. .-.|-..+.+.+++...
T Consensus 14 p~~~l~V~nLp~~-~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 14 TRRVVHIMDFQRG-KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCEEEEESCCCS-SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 4444456666440 123455778889999999888743 46777789888877765
No 116
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens} SCOP: d.58.7.3
Probab=31.38 E-value=80 Score=18.36 Aligned_cols=44 Identities=14% Similarity=0.142 Sum_probs=27.8
Q ss_pred HHHHH-HHhCCeEEEeec--------CeeEEEeCCHHHHHHHHHh-CCCcccCC
Q 044449 67 LAELA-KIYGPILSLKLG--------EVTTVVVSSAPMAKYILQD-HDSSFYNR 110 (200)
Q Consensus 67 ~~~~~-~~yG~v~~~~~~--------~~~~v~v~~p~~~~~il~~-~~~~~~~~ 110 (200)
+.+.. .+||+|..+.+. |.-.|-..+++.++..... ++..|..+
T Consensus 43 l~~~f~~~~G~V~~v~i~~~~~~~~~G~~fV~f~~~~~A~~A~~~lng~~~~Gr 96 (104)
T 1jmt_A 43 VFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQ 96 (104)
T ss_dssp HHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTE
T ss_pred HHHHhhccCCceEEEEEEeCCCCCccEEEEEEECCHHHHHHHHHHHCCCEECCE
Confidence 34445 899999988774 2344556788877766543 44445444
No 117
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=31.38 E-value=76 Score=18.09 Aligned_cols=37 Identities=24% Similarity=0.271 Sum_probs=28.3
Q ss_pred HHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHH
Q 044449 65 KSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 65 ~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~ 101 (200)
..+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 27 ~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 27 KALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp HHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 5577788999999988764 345677789988887774
No 118
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=31.29 E-value=94 Score=19.32 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=29.7
Q ss_pred chHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHhC
Q 044449 63 PHKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQDH 103 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~~ 103 (200)
..+.+.++..+||+|..+.+.. .-.|-..+++.++..+..+
T Consensus 100 t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 149 (167)
T 2cjk_A 100 RPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNK 149 (167)
T ss_dssp CHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCS
T ss_pred CHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCC
Confidence 3466788889999988776532 3456678999998888643
No 119
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=30.95 E-value=1.1e+02 Score=19.85 Aligned_cols=48 Identities=13% Similarity=0.079 Sum_probs=33.2
Q ss_pred cccccccCCCchHHHHHHHHHhCCeEEEeec-----CeeEEEeCCHHHHHHHHHh
Q 044449 53 IGNLLELGEKPHKSLAELAKIYGPILSLKLG-----EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 53 ~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~~~~v~v~~p~~~~~il~~ 102 (200)
+||+.. .-..+.++++..+||+|-++.+. +.-.|-..|++.+++....
T Consensus 51 VgNL~~--~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 51 VENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp ECSCCS--CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EeCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 455532 23456788899999999887763 2456777898888777653
No 120
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=30.88 E-value=78 Score=18.08 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=29.4
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 36 t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 36 TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 446678888999999887763 2345667899888887753
No 121
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=30.69 E-value=78 Score=18.03 Aligned_cols=49 Identities=18% Similarity=0.185 Sum_probs=33.1
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec--------CeeEEEeCCHHHHHHHHH
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG--------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~~~~il~ 101 (200)
-++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 18 l~v~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 74 (105)
T 2dnh_A 18 LFVGMLNK--QQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 74 (105)
T ss_dssp EEEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHH
Confidence 34555543 22446678888999998887664 234566789988888775
No 122
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=30.35 E-value=80 Score=18.06 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=29.0
Q ss_pred chHHHHHHHHHhCCeEEEeec--------CeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLG--------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 42 t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 42 SDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 345678888999999877653 2345667899888888763
No 123
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=29.84 E-value=83 Score=18.08 Aligned_cols=49 Identities=16% Similarity=0.187 Sum_probs=31.6
Q ss_pred ccccccccccCCCchHHHHHHHHHhCCeEEEeec---CeeEEEeCCHHHHHHHH
Q 044449 50 YPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---EVTTVVVSSAPMAKYIL 100 (200)
Q Consensus 50 ~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~~~~il 100 (200)
|-++||+.. +--...+.++..+||+|..+.+. |.-.|-..+++.+++..
T Consensus 9 wL~VgNL~~--~~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai 60 (89)
T 2wbr_A 9 WLLLKNLTA--QIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQ 60 (89)
T ss_dssp EEEEECCCT--TCCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHH
T ss_pred eEEEeCCCc--cCCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHH
Confidence 344555533 23447789999999999987763 34566667776555544
No 124
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.25 E-value=98 Score=18.72 Aligned_cols=53 Identities=13% Similarity=0.143 Sum_probs=35.9
Q ss_pred CCCccccccccccCCCchHHHHHHHHHhCCeEEEeec---CeeEEEeCCHHHHHHHHH
Q 044449 47 PTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 47 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~~~~il~ 101 (200)
|...-++|++..- -....+.++..+||.|..+.+. |.-.|-..+.+.++..+.
T Consensus 30 ps~~LfVgNLp~~--vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 30 PSRVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp CCSEEEEESCCTT--CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 3334456666542 3446678889999998887664 456677788888877764
No 125
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=29.15 E-value=78 Score=17.56 Aligned_cols=48 Identities=21% Similarity=0.289 Sum_probs=32.5
Q ss_pred ccccccccCCCchHHHHHHHHHhCCeEEEeecC--------eeEEEeCCHHHHHHHHH
Q 044449 52 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGE--------VTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~--------~~~v~v~~p~~~~~il~ 101 (200)
+++++.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++..+.
T Consensus 20 ~v~nlp~--~~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 20 FVGNLEA--RVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp EEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred EEECCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 4444433 234566788889999998876632 34566788888888775
No 126
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.04 E-value=96 Score=18.53 Aligned_cols=54 Identities=17% Similarity=0.122 Sum_probs=35.6
Q ss_pred CCCccccccccccCCCchHHHHHHHHHhCCeEEEeec---CeeEEEeCCHHHHHHHHH
Q 044449 47 PTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 47 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~~~~il~ 101 (200)
|...=++||+..- .-....+.++..+||+|..+.+. +.-.|-..+.+.++....
T Consensus 24 p~~~l~V~NLp~~-~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 24 LGRVIHLSNLPHS-GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp CCCEEEEESCCCS-SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEeCCCCc-cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 3334455666441 02345678888999998888774 346677788888877764
No 127
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.98 E-value=74 Score=17.22 Aligned_cols=49 Identities=24% Similarity=0.215 Sum_probs=31.7
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHH
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~ 101 (200)
-++|++.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 8 l~v~nlp~--~~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 8 LYIRGLQP--GTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEESCCT--TCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 34455432 22345567777889998887653 235567788888887765
No 128
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=28.93 E-value=1.1e+02 Score=18.99 Aligned_cols=48 Identities=13% Similarity=0.123 Sum_probs=32.6
Q ss_pred ccccccccCCCchHHHHHHHHHhCCeEEEeecC-----eeEEEeCCHHHHHHHHH
Q 044449 52 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGE-----VTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~-----~~~v~v~~p~~~~~il~ 101 (200)
++||+.. .-..+.+.++..+||.|-++.+.. +-.|-..+++.++....
T Consensus 32 ~V~NL~~--~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 32 IVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp EEESCCS--CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred EECCCCC--CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 3566532 234566888999999998877643 25677788877766654
No 129
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=28.52 E-value=1e+02 Score=18.69 Aligned_cols=51 Identities=20% Similarity=0.167 Sum_probs=34.4
Q ss_pred ccccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 50 YPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 50 ~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
.-+++++..- -..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 48 ~l~V~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 48 CLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CBCEETCTTS--CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3445555432 3445678888999999887763 2355667899988888763
No 130
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.52 E-value=92 Score=18.18 Aligned_cols=45 Identities=24% Similarity=0.252 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCeEEEeec-----CeeEEEeCCHHHHHHHHHh-CCCcccC
Q 044449 65 KSLAELAKIYGPILSLKLG-----EVTTVVVSSAPMAKYILQD-HDSSFYN 109 (200)
Q Consensus 65 ~~~~~~~~~yG~v~~~~~~-----~~~~v~v~~p~~~~~il~~-~~~~~~~ 109 (200)
+.+.+...+||+|..+.+. |.-.|-..+++.++..+.. ++..+..
T Consensus 41 ~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~g 91 (112)
T 2dit_A 41 EDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGG 91 (112)
T ss_dssp HHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEETT
T ss_pred HHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 4667778899998887653 4456666888888777643 3334433
No 131
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.04 E-value=80 Score=18.47 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=29.8
Q ss_pred chHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHhC
Q 044449 63 PHKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQDH 103 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~~ 103 (200)
....+.++..+||+|..+.+.. .-.|-..+++.++..+..+
T Consensus 40 te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~ 89 (116)
T 1x4b_A 40 TEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAAR 89 (116)
T ss_dssp CHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSC
T ss_pred CHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhC
Confidence 3466788889999987776532 3456678999998888653
No 132
>2huj_A LIN2004 protein; hypothetical protein, structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 1.74A {Listeria innocua} SCOP: a.24.26.1
Probab=28.02 E-value=1e+02 Score=19.47 Aligned_cols=44 Identities=14% Similarity=-0.021 Sum_probs=25.8
Q ss_pred cchhhHhhhHHHHHHHHHHHHHHHHHHhhCCCceeHHHHHHHHH
Q 044449 147 FTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTS 190 (200)
Q Consensus 147 f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~ 190 (200)
|.+..+..++..+-+.+++..+......+.+...|.+..++.++
T Consensus 17 ~~~~~L~~lteqLi~~~~e~~~ry~~~ke~~~e~DFy~eVKPf~ 60 (140)
T 2huj_A 17 FQGMELLIRTEQLLLQNEKNWELYLSNREEEKPFDFYKDMKPFV 60 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTTTHHHHH
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccccchH
Confidence 55666666666666666666666544445566666555554444
No 133
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=27.90 E-value=81 Score=17.35 Aligned_cols=49 Identities=18% Similarity=0.119 Sum_probs=32.8
Q ss_pred ccccccccCCCchHHHHHHHHHhCCeEEEeec-------CeeEEEeCCHHHHHHHHHh
Q 044449 52 VIGNLLELGEKPHKSLAELAKIYGPILSLKLG-------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~~~~il~~ 102 (200)
+++++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 12 ~V~nlp~--~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 12 FVRNLPF--DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EECSCCT--TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 4455442 23456678888999998887653 2345666888888887753
No 134
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=27.76 E-value=76 Score=16.99 Aligned_cols=39 Identities=18% Similarity=0.089 Sum_probs=28.4
Q ss_pred hHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 64 HKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 64 ~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
.+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 15 ~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 15 DETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp HHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 45677788899998887653 2346677899988888763
No 135
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.71 E-value=86 Score=17.59 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=34.3
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec---CeeEEEeCCHHHHHHHHHh
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~~~~il~~ 102 (200)
-++|++ .-..+.+.++..+||+|..+.++ +.-.|-..+++.++..+..
T Consensus 18 l~V~n~----~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 18 LYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEEECS----SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEcCC----CCCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 455662 33456688888999999888774 3456677899988888754
No 136
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=27.65 E-value=88 Score=17.66 Aligned_cols=39 Identities=15% Similarity=0.205 Sum_probs=29.2
Q ss_pred chHHHHHHHHHhCCeEEEeec----CeeEEEeCCHHHHHHHHH
Q 044449 63 PHKSLAELAKIYGPILSLKLG----EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~----~~~~v~v~~p~~~~~il~ 101 (200)
..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 13 t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~ 55 (101)
T 2hvz_A 13 GKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 55 (101)
T ss_dssp SHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHH
Confidence 345678888999998877663 345667789988888775
No 137
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=27.46 E-value=96 Score=18.02 Aligned_cols=50 Identities=16% Similarity=0.167 Sum_probs=34.2
Q ss_pred ccccccccCCCchHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHhC
Q 044449 52 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQDH 103 (200)
Q Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~~ 103 (200)
++|++.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++..+...
T Consensus 29 fV~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 29 FIGGLSW--QTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp EEESCCT--TCCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred EEeCCCC--CCCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 4454432 233456788889999998877632 3567778999998888654
No 138
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=27.40 E-value=1e+02 Score=18.30 Aligned_cols=48 Identities=15% Similarity=0.222 Sum_probs=33.6
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh-CCCcccCC
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD-HDSSFYNR 110 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~-~~~~~~~~ 110 (200)
....+.++..+||+|..+.+. +.-.|-..+++.++..+.. ++..+..+
T Consensus 35 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 92 (126)
T 3ex7_B 35 TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQ 92 (126)
T ss_dssp CHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSS
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCe
Confidence 446678888999999888763 3456778999988888753 44444433
No 139
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.36 E-value=90 Score=17.69 Aligned_cols=57 Identities=14% Similarity=0.074 Sum_probs=36.4
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh-CCCcccC
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD-HDSSFYN 109 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~-~~~~~~~ 109 (200)
-+++++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.. +...+..
T Consensus 16 l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g 82 (103)
T 2dnm_A 16 LKVDNLTYR--TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDG 82 (103)
T ss_dssp EEEESCCTT--CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCBTT
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 344555432 3456678888999999888764 2356677888888777753 3334433
No 140
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=27.07 E-value=80 Score=17.00 Aligned_cols=49 Identities=22% Similarity=0.210 Sum_probs=33.0
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHH
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~ 101 (200)
-+++++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 10 l~V~nl~~--~~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 67 (85)
T 3mdf_A 10 LYVGGLAE--EVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 67 (85)
T ss_dssp EEEECCCT--TCCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEEECCCC--CCCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHH
Confidence 34455542 22346678888999999888762 235667788988888774
No 141
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.86 E-value=77 Score=17.94 Aligned_cols=51 Identities=20% Similarity=0.167 Sum_probs=33.5
Q ss_pred ccccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 50 YPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 50 ~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
.-+++++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 14 ~l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 2cqb_A 14 VLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 73 (102)
T ss_dssp CEEEESCCSS--CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3445555432 3456678888999998877662 2345566888888888753
No 142
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.59 E-value=91 Score=17.48 Aligned_cols=40 Identities=20% Similarity=0.255 Sum_probs=30.1
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 21 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 21 SEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp CHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 445678888999999888773 2356777899988888743
No 143
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=26.31 E-value=99 Score=17.79 Aligned_cols=39 Identities=18% Similarity=0.127 Sum_probs=29.8
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHH
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~ 101 (200)
....+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 39 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 39 QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp CHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 446678888999999888774 345667789998888775
No 144
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.19 E-value=1e+02 Score=17.84 Aligned_cols=43 Identities=14% Similarity=0.180 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCeEEEeecC-eeEEEeCCHHHHHHHHHhCCCcc
Q 044449 65 KSLAELAKIYGPILSLKLGE-VTTVVVSSAPMAKYILQDHDSSF 107 (200)
Q Consensus 65 ~~~~~~~~~yG~v~~~~~~~-~~~v~v~~p~~~~~il~~~~~~~ 107 (200)
..+.+...+||.|..+++.. +-.|...|.+.+.++..-++...
T Consensus 30 ~~L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~mnG~~v 73 (91)
T 2dnr_A 30 DELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGKEL 73 (91)
T ss_dssp HHHHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHGGGGTTCEE
T ss_pred HHHHHHHHhCCCeEEEEEecCCEEEEECChHHHHHHHhcCCeEe
Confidence 44566667789999888755 45666678888777665443333
No 145
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=25.87 E-value=94 Score=17.40 Aligned_cols=50 Identities=16% Similarity=0.255 Sum_probs=34.5
Q ss_pred ccccccccCCCchHHHHHHHHHhCCeEEEeec-CeeEEEeCCHHHHHHHHHh
Q 044449 52 VIGNLLELGEKPHKSLAELAKIYGPILSLKLG-EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~v~v~~p~~~~~il~~ 102 (200)
++|++..- .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 14 ~V~nlp~~-~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 14 FIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp EEESSTTS-CCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 45555420 22446678888999998887763 4567777999988888764
No 146
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=25.67 E-value=94 Score=17.34 Aligned_cols=39 Identities=13% Similarity=0.264 Sum_probs=29.3
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHH
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~ 101 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 15 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 62 (96)
T 2x1f_A 15 TEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 62 (96)
T ss_dssp CHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 345678888999999888763 335667789988888775
No 147
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.56 E-value=1.1e+02 Score=17.91 Aligned_cols=48 Identities=15% Similarity=0.080 Sum_probs=33.4
Q ss_pred chHHHHHHHHHhCCeEEEeec---CeeEEEeCCHHHHHHHHHh-CCCcccCC
Q 044449 63 PHKSLAELAKIYGPILSLKLG---EVTTVVVSSAPMAKYILQD-HDSSFYNR 110 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~~~~il~~-~~~~~~~~ 110 (200)
....+.++..+||+|..+.+. +.-.|-..+++.++..+.. ++..+..+
T Consensus 23 te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 74 (111)
T 1whx_A 23 LAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHV 74 (111)
T ss_dssp CHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSS
T ss_pred CHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCe
Confidence 456688889999999888763 3466777888888777653 34444444
No 148
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=25.02 E-value=1.1e+02 Score=17.79 Aligned_cols=40 Identities=20% Similarity=0.328 Sum_probs=30.0
Q ss_pred chHHHHHHHHHhCCeEEEee-cCeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKL-GEVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+ -|.-.|-..+.+.++..+..
T Consensus 44 t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 44 QESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp CHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 34567888899999887766 45567777899988887753
No 149
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.95 E-value=99 Score=17.32 Aligned_cols=51 Identities=16% Similarity=0.114 Sum_probs=33.8
Q ss_pred ccccccccccCCCchHHHHHHHHHhCCeE-EEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 50 YPVIGNLLELGEKPHKSLAELAKIYGPIL-SLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 50 ~p~~g~~~~~~~~~~~~~~~~~~~yG~v~-~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
--++|++..- -..+.+.++..+||+|. .+.+. +.-.|-..+++.++..+..
T Consensus 11 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 71 (99)
T 2div_A 11 SLWMGDLEPY--MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 71 (99)
T ss_dssp EEEECSCCTT--CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHT
T ss_pred EEEEeCCCCC--CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHH
Confidence 3455555432 34566788889999988 76553 2345666899988888763
No 150
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.91 E-value=1e+02 Score=17.53 Aligned_cols=58 Identities=19% Similarity=0.323 Sum_probs=37.4
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeecC----------eeEEEeCCHHHHHHHHHh--CCCcccCC
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLGE----------VTTVVVSSAPMAKYILQD--HDSSFYNR 110 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~----------~~~v~v~~p~~~~~il~~--~~~~~~~~ 110 (200)
-++|++.. .-....+.++..+||+|..+.+.. .-.|-..+++.++..+.. +...+..+
T Consensus 18 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~~g~ 87 (107)
T 2cph_A 18 ILVRNIPF--QANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGR 87 (107)
T ss_dssp EEEESCCT--TCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSC
T ss_pred EEEeCCCC--cCCHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHHhccCCeECCC
Confidence 34455543 234566888889999998887733 346667899988888754 34444433
No 151
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=24.79 E-value=1e+02 Score=17.49 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=34.7
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeecC-eeEEEeCCHHHHHHHHHh
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLGE-VTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~-~~~v~v~~p~~~~~il~~ 102 (200)
-+++++.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 14 l~V~nl~~--~~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 14 LFVRNLAN--TVTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp EEEECCCT--TCCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 34455533 234466788889999998887743 466677899988888763
No 152
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.65 E-value=85 Score=16.46 Aligned_cols=40 Identities=13% Similarity=0.120 Sum_probs=26.2
Q ss_pred hHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHhC
Q 044449 64 HKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQDH 103 (200)
Q Consensus 64 ~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~~ 103 (200)
.+.+.++..+||+|..+.+.. .-.|-..+++.++..+...
T Consensus 14 ~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 14 QEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp SHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred HHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 455777888899877665522 2345557788887777543
No 153
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=24.52 E-value=93 Score=16.90 Aligned_cols=45 Identities=13% Similarity=0.076 Sum_probs=29.7
Q ss_pred chHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHhCCCcc
Q 044449 63 PHKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQDHDSSF 107 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~~~~~~ 107 (200)
..+.+.++..+||+|..+.+.. .-.|-..+++.++..+.-++..+
T Consensus 19 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g~~~ 72 (89)
T 3ucg_A 19 TAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 72 (89)
T ss_dssp CHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTTCEE
T ss_pred CHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCCCEE
Confidence 3456778888999988776531 34566688888877764333333
No 154
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=24.15 E-value=1.5e+02 Score=19.02 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=37.0
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHhCCCccc
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQDHDSSFY 108 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~~~~~~~ 108 (200)
=++|++.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+......+.
T Consensus 16 l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~~~~~ 80 (196)
T 1l3k_A 16 LFIGGLSF--ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD 80 (196)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEET
T ss_pred EEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCCCEEC
Confidence 34455543 23456678888999998876652 2356777999999998875443333
No 155
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=24.12 E-value=1.3e+02 Score=18.26 Aligned_cols=40 Identities=28% Similarity=0.304 Sum_probs=29.4
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 55 ~~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 103 (139)
T 1u6f_A 55 DEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAG 103 (139)
T ss_dssp CHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 345688888999998887663 1345667899988888764
No 156
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.92 E-value=1.1e+02 Score=17.63 Aligned_cols=51 Identities=12% Similarity=0.127 Sum_probs=35.1
Q ss_pred CccccccccccCCCchHHHHHHHHHhCCeEEEeec---CeeEEEeCCHHHHHHHHH
Q 044449 49 PYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 49 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~~~~il~ 101 (200)
..-++|++.. .-....+.++..+||.|..+.+. |.-.|-..+.+.++..+.
T Consensus 16 ~~l~V~nLp~--~~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 16 RVLHIRKLPG--EVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp SEEEEESCCT--TCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3455566653 23445677888999999887663 456777788888877765
No 157
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.78 E-value=85 Score=17.67 Aligned_cols=50 Identities=14% Similarity=0.215 Sum_probs=33.0
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec---CeeEEEeCCHHHHHHHHHh
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~~~~il~~ 102 (200)
-++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 18 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~ 70 (99)
T 2cpj_A 18 LFVGNLPP--DITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVE 70 (99)
T ss_dssp EEEESCCT--TCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 34455543 23445678888999998887764 3456666888888777643
No 158
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=23.71 E-value=1.1e+02 Score=17.31 Aligned_cols=40 Identities=10% Similarity=0.262 Sum_probs=30.4
Q ss_pred chHHHHHHHHHhCCeEEEeec-CeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLG-EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~-~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 36 t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 36 SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp CHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 446678888999999888773 4566777899988888753
No 159
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.67 E-value=1.1e+02 Score=17.32 Aligned_cols=40 Identities=15% Similarity=0.227 Sum_probs=28.7
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 21 ~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 21 TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp CHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 345678888999998776653 2345666889988888753
No 160
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=23.16 E-value=99 Score=16.71 Aligned_cols=45 Identities=16% Similarity=0.234 Sum_probs=31.3
Q ss_pred chHHHHHHHHHhCCeEEEeec----------CeeEEEeCCHHHHHHHHHh-CCCcc
Q 044449 63 PHKSLAELAKIYGPILSLKLG----------EVTTVVVSSAPMAKYILQD-HDSSF 107 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~----------~~~~v~v~~p~~~~~il~~-~~~~~ 107 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+.. ++..+
T Consensus 17 t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~ 72 (88)
T 4a8x_A 17 TKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQI 72 (88)
T ss_dssp CHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHHcCCCeE
Confidence 345677888999999877652 2456677899988888763 33333
No 161
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=23.05 E-value=1.7e+02 Score=19.40 Aligned_cols=50 Identities=10% Similarity=0.103 Sum_probs=34.3
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec----CeeEEEeCCHHHHHHHHH
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG----EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~v~v~~p~~~~~il~ 101 (200)
=++|++... .-..+.+.++..+||+|.++.+. |.-.|-..+++.++..+.
T Consensus 7 l~V~nL~~~-~~~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~ 60 (205)
T 3tyt_A 7 LMVYGLDQS-KMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAIT 60 (205)
T ss_dssp EEEECCCTT-TCCHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHH
T ss_pred EEEeCCCcc-cCCHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHH
Confidence 355665411 12335678888999999998763 457788889988877764
No 162
>1ufw_A Synaptojanin 2; RNP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.91 E-value=1.2e+02 Score=17.67 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=29.1
Q ss_pred hHHHHHHHHHhCCeEEEeecC-eeEEEeCCHHHHHHHHHhCCCcccCC
Q 044449 64 HKSLAELAKIYGPILSLKLGE-VTTVVVSSAPMAKYILQDHDSSFYNR 110 (200)
Q Consensus 64 ~~~~~~~~~~yG~v~~~~~~~-~~~v~v~~p~~~~~il~~~~~~~~~~ 110 (200)
...+.+....||.+..+++-. +-.|...|.+.+...+.-++..+..+
T Consensus 38 ~~~L~~~F~~~G~Vilvr~v~d~~fVtF~d~~sAl~AI~ldG~~v~Gr 85 (95)
T 1ufw_A 38 RTELMQTLGSYGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKVKGR 85 (95)
T ss_dssp HHHHHHHHHHHSCCSEEEEETTEEEEECSCSHHHHHHHHGGGSEETTE
T ss_pred HHHHHHHHHHCCCEEEEEEecCcEEEEEcChHHHHHHHhcCCeeeCCe
Confidence 344566667799888887755 45555567777766665444444333
No 163
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=22.85 E-value=1.1e+02 Score=17.34 Aligned_cols=49 Identities=20% Similarity=0.158 Sum_probs=32.2
Q ss_pred ccccccccCCCchHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHh
Q 044449 52 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~ 102 (200)
++|++.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 23 fV~nLp~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 23 IVNYLPQ--NMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 4455433 223466788889999998876531 235667899888877653
No 164
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.84 E-value=1.2e+02 Score=17.62 Aligned_cols=51 Identities=18% Similarity=0.139 Sum_probs=34.9
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHhC
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQDH 103 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~~ 103 (200)
-+++++.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++..+...
T Consensus 20 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 79 (116)
T 2cqd_A 20 IFVGGLPY--HTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDP 79 (116)
T ss_dssp EEEECCCS--SCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCS
T ss_pred EEEeCCCC--CCCHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhC
Confidence 34455433 234566788889999998877643 3466678999998888643
No 165
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=22.47 E-value=1.3e+02 Score=17.72 Aligned_cols=56 Identities=25% Similarity=0.255 Sum_probs=36.0
Q ss_pred ccccccccCCCchHHHHHHHHHhCCeEEEeec--------CeeEEEeCCHHHHHHHHHh-CCCcccC
Q 044449 52 VIGNLLELGEKPHKSLAELAKIYGPILSLKLG--------EVTTVVVSSAPMAKYILQD-HDSSFYN 109 (200)
Q Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~~~~il~~-~~~~~~~ 109 (200)
++|++.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+.. ++..+..
T Consensus 11 ~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g 75 (116)
T 2fy1_A 11 FIGGLNR--ETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHG 75 (116)
T ss_dssp EEECCTT--TCCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCSS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 3454433 23456678888999998877663 3456677899988888753 3333433
No 166
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=22.43 E-value=1e+02 Score=17.99 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=28.6
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 53 t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 101 (118)
T 2khc_A 53 TDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 101 (118)
T ss_dssp CHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 346678888899998887663 2345666888888877754
No 167
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=22.41 E-value=1.1e+02 Score=17.11 Aligned_cols=49 Identities=27% Similarity=0.251 Sum_probs=31.0
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEE--------Eeec---------CeeEEEeCCHHHHHHHHH
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILS--------LKLG---------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~--------~~~~---------~~~~v~v~~p~~~~~il~ 101 (200)
-++|++.. .-..+.+.++..+||.|.. +.+. |.-.|-..+++.++..+.
T Consensus 16 l~V~nLp~--~~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~ 81 (99)
T 2la6_A 16 IFVQGLGE--NVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAID 81 (99)
T ss_dssp EEEECCCS--SCCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHH
Confidence 44455533 2345667888899998766 4432 134566688888887775
No 168
>2ghp_A U4/U6 snRNA-associated splicing factor PRP24; RNA chaperone, RNA binding domain, RNA recognition motif, SP factor, snRNP, spliceosome; 2.70A {Saccharomyces cerevisiae} SCOP: d.58.7.1 d.58.7.1 d.58.7.1 PDB: 2go9_A 2kh9_A
Probab=22.24 E-value=1.8e+02 Score=20.26 Aligned_cols=58 Identities=12% Similarity=0.151 Sum_probs=38.1
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec-------CeeEEEeCCHHHHHHHHHhCCCcccCC
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG-------EVTTVVVSSAPMAKYILQDHDSSFYNR 110 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~~~~il~~~~~~~~~~ 110 (200)
=++|++.. .-....+.++..+||+|..+.+. |.-.|-..+++.++..+..++..+..+
T Consensus 44 l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~A~~A~~~~~~~~~g~ 108 (292)
T 2ghp_A 44 VLVKNLPK--SYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAITKTHKVVGQN 108 (292)
T ss_dssp EEEEEECT--TCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHTTTTCEETTE
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEEECCHHHHHHHHHhCCcEeCCc
Confidence 34455543 23456678888999998887652 346677799999988885444444433
No 169
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=22.23 E-value=1.3e+02 Score=17.53 Aligned_cols=50 Identities=20% Similarity=0.147 Sum_probs=32.6
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHh
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~ 102 (200)
-+++++.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 28 l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 28 LFIYHLPQ--EFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp EEEESCCS--SCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 34455543 234466788889999987766532 245666889888888753
No 170
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=22.22 E-value=1.4e+02 Score=18.27 Aligned_cols=39 Identities=23% Similarity=0.258 Sum_probs=29.1
Q ss_pred chHHHHHHHHHhCCeEEEeec--------CeeEEEeCCHHHHHHHHH
Q 044449 63 PHKSLAELAKIYGPILSLKLG--------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~~~~il~ 101 (200)
..+.+.++.++||+|..+.+. |.-.|-..+++.++..+.
T Consensus 13 t~~~l~~~f~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~ 59 (166)
T 3md3_A 13 TEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQ 59 (166)
T ss_dssp CHHHHHHHHGGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHH
Confidence 345678888999999887763 235667789998888873
No 171
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.08 E-value=1.2e+02 Score=17.17 Aligned_cols=49 Identities=22% Similarity=0.135 Sum_probs=33.6
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec-------CeeEEEeCCHHHHHHHHH
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG-------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~~~~il~ 101 (200)
-++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 18 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 18 LYVGNLSR--DVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEEESCCT--TCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCc--cCCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 44455543 23456678888999999887663 245667789988888775
No 172
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=22.00 E-value=1.8e+02 Score=19.24 Aligned_cols=54 Identities=24% Similarity=0.268 Sum_probs=35.1
Q ss_pred CCCccccccccccCCCchHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 47 PTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 47 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
|..-=++|++.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 14 p~~tlfVgnLp~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 14 PMASLYVGDLHP--DVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp -CCEEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCcEEEEeCCCC--CCCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 333345566543 23356678888999999887652 2356777899888877753
No 173
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=21.92 E-value=1.2e+02 Score=17.12 Aligned_cols=38 Identities=13% Similarity=0.116 Sum_probs=25.6
Q ss_pred hHHHHHHHHHhCCe---EEEeecCeeEEEeCC-----HHHHHHHHH
Q 044449 64 HKSLAELAKIYGPI---LSLKLGEVTTVVVSS-----APMAKYILQ 101 (200)
Q Consensus 64 ~~~~~~~~~~yG~v---~~~~~~~~~~v~v~~-----p~~~~~il~ 101 (200)
.+...++.++|.++ +++..++.+.+-|.+ -+.+.++++
T Consensus 23 ~EL~kRl~~~fpd~~~~V~Vr~~s~n~lsV~g~~k~dKe~i~eiLq 68 (81)
T 1ghh_A 23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKQRISEILQ 68 (81)
T ss_dssp HHHHHHHHHHCSSSCCEEEEEEESSCEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCceEEEeecCCCceeecCCChhHHHHHHHHHH
Confidence 35567788999884 888888877776533 344555554
No 174
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.79 E-value=1.2e+02 Score=17.27 Aligned_cols=58 Identities=14% Similarity=0.105 Sum_probs=36.0
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEE-Eee--------cCeeEEEeCCHHHHHHHHHhCCCcccCC
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILS-LKL--------GEVTTVVVSSAPMAKYILQDHDSSFYNR 110 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~-~~~--------~~~~~v~v~~p~~~~~il~~~~~~~~~~ 110 (200)
-++|++.. .-..+.+.++..+||.|.. +.+ -|.-.|-..+++.++..+..+...+..+
T Consensus 18 l~V~nLp~--~~te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~gr 84 (104)
T 1wg5_A 18 VRLRGLPF--GCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 84 (104)
T ss_dssp EEEESCCT--TCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSS
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhCCc
Confidence 34455433 2334567788888998765 443 1346777799999998886544444333
No 175
>1b35_D CRPV, protein (cricket paralysis virus, VP4); insect picorna-like virus, icosahedral virus; 2.40A {Cricket paralysis virus} SCOP: b.121.4.1
Probab=21.66 E-value=54 Score=16.39 Aligned_cols=26 Identities=31% Similarity=0.505 Sum_probs=14.0
Q ss_pred CccccccccccCCCchHHHHHHHHHh
Q 044449 49 PYPVIGNLLELGEKPHKSLAELAKIY 74 (200)
Q Consensus 49 ~~p~~g~~~~~~~~~~~~~~~~~~~y 74 (200)
.+|++||...-..-......++.+-+
T Consensus 30 ~ipilgn~fs~pawisa~~~~~~k~~ 55 (57)
T 1b35_D 30 HIPVLGNIFSTPAWISAKAADLAKLF 55 (57)
T ss_dssp CCCCSCCSSSSCTTCCCCHHHHHHHT
T ss_pred ccccccccccchHHHHHHHHHHHHHh
Confidence 47888887654333333444444443
No 176
>2xs2_A Deleted in azoospermia-like; RNA binding protein-RNA complex; 1.35A {Mus musculus} PDB: 2xs7_A 2xs5_A 2xsf_A
Probab=21.65 E-value=67 Score=18.23 Aligned_cols=39 Identities=13% Similarity=0.146 Sum_probs=27.7
Q ss_pred chHHHHHHHHHhCCeEEEeec--------CeeEEEeCCHHHHHHHHH
Q 044449 63 PHKSLAELAKIYGPILSLKLG--------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~~~~il~ 101 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 22 t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~Ai~ 68 (102)
T 2xs2_A 22 DETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVE 68 (102)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSCCCHHHHTT
T ss_pred CHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHh
Confidence 445678888999999887663 234556678888877775
No 177
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=21.00 E-value=1.5e+02 Score=17.86 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=29.9
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHHh
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~~ 102 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 76 ~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 124 (140)
T 2ku7_A 76 DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 124 (140)
T ss_dssp CHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 346678888999999888763 2356677899988888753
No 178
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.93 E-value=1.3e+02 Score=17.26 Aligned_cols=49 Identities=12% Similarity=0.156 Sum_probs=33.9
Q ss_pred ccccccccCCCchHHHHHHHHHhCCeEEEeec---CeeEEEeCCHHHHHHHHHh
Q 044449 52 VIGNLLELGEKPHKSLAELAKIYGPILSLKLG---EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 52 ~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~~~~il~~ 102 (200)
++|++.. .-....+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 29 ~V~nl~~--~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 29 YCGGIAS--GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEECCSS--CCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 4444432 23456678888999999888763 4567777899888877743
No 179
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.64 E-value=1.3e+02 Score=17.01 Aligned_cols=54 Identities=20% Similarity=0.109 Sum_probs=35.1
Q ss_pred CCCccccccccccCCCchHHHHHHHHHhCCeEEEeec-------CeeEEEeCCHHHHHHHHHh
Q 044449 47 PTPYPVIGNLLELGEKPHKSLAELAKIYGPILSLKLG-------EVTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 47 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~~~~il~~ 102 (200)
+..--+++++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 14 ~~~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 14 QVVNLYVKNLDDG--IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp SCCCEEEECCCTT--CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 3334455555432 2345677788899998887664 2355667899988888753
No 180
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=20.58 E-value=1.9e+02 Score=18.88 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=30.2
Q ss_pred chHHHHHHHHHhCCeEEEeec---------CeeEEEeCCHHHHHHHHH
Q 044449 63 PHKSLAELAKIYGPILSLKLG---------EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~~~~il~ 101 (200)
..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 41 t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 88 (216)
T 2qfj_A 41 GEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 88 (216)
T ss_dssp CHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHH
Confidence 446678888999999887762 345677789999988876
No 181
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=20.50 E-value=1.4e+02 Score=17.32 Aligned_cols=50 Identities=16% Similarity=0.139 Sum_probs=33.5
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeecC---------eeEEEeCCHHHHHHHHHh
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLGE---------VTTVVVSSAPMAKYILQD 102 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~~~~il~~ 102 (200)
-++|++.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 18 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (115)
T 2dgo_A 18 VFVGDLSP--EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 76 (115)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 34455432 234466788889999988876632 345667899988888753
No 182
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.29 E-value=1.2e+02 Score=16.59 Aligned_cols=49 Identities=22% Similarity=0.318 Sum_probs=33.8
Q ss_pred cccccccccCCCchHHHHHHHHHhCCeEEEeec-CeeEEEeCCHHHHHHHHH
Q 044449 51 PVIGNLLELGEKPHKSLAELAKIYGPILSLKLG-EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 51 p~~g~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~v~v~~p~~~~~il~ 101 (200)
-++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 11 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~ 60 (90)
T 2dnq_A 11 LFIGNLPR--EATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIR 60 (90)
T ss_dssp EEEESCCS--SCCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 34455533 23446678888999998887663 356677789998888774
No 183
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=20.08 E-value=2.1e+02 Score=19.20 Aligned_cols=39 Identities=23% Similarity=0.295 Sum_probs=30.7
Q ss_pred chHHHHHHHHHhCCeEEEeec----CeeEEEeCCHHHHHHHHH
Q 044449 63 PHKSLAELAKIYGPILSLKLG----EVTTVVVSSAPMAKYILQ 101 (200)
Q Consensus 63 ~~~~~~~~~~~yG~v~~~~~~----~~~~v~v~~p~~~~~il~ 101 (200)
..+.+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 48 te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~ 90 (229)
T 2adc_A 48 TPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMS 90 (229)
T ss_dssp CHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 346678888999999888774 456777899998888875
Done!