Your job contains 1 sequence.
>044464
MSGSGHCFVEWKEEFISQERGNRVVHYFLKDSAGESVLAVVGTERSVRHMFYVVAEEFVR
VYGAENSMHAGYKWRSRREVVDWLTSMLSKQHHQGDWSKSPKHDLAQASGSPECPMNGVS
ARKVQVADEMQGHLSRNINGQSSDIVWSGVAWTCGKQLKHFPAFCRNGTTISIQSFVFVM
AKGENHYVAYLEDMYEDKRGQKKVKVRWFHHNQEVKGVVSLRNPHPKEVFITPHSQVISA
ECVDGSASVLTREHFSKCLAAFPNALLARVHLCTRQFRSNRLKPFDLSKLHGYHDQPILS
LLNSNTLQETNSSGHLITGVGDETTAGENVKLGIKRTRRAKGSQTFLTDNSTVGIGRGSQ
LMTYKPSYKKLKCGLSGMSLLSLKHIEFLPWYSAMYKVNAKIELLCQDSGIRGCWFRCIV
LQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPTPPDNREDL
SLGIGTAVDAWWSDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRISRDWAGDQ
WVDIEDKPDILSVISDTISPENKISLSSTIANDVKSDGLDSCIEVPITTKLDTVEEGKPN
LASLTCSDTLPEDLDCVNEEKAPSLEQGSGQGVDHVNASGDEVHDARGNDEHEDDDDNGG
KVDAEVFETSGHNDSRTTEVLMEVTA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044464
(686 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2162117 - symbol:AT5G55600 species:3702 "Arabi... 1859 7.5e-192 1
TAIR|locus:2026874 - symbol:AT1G68580 species:3702 "Arabi... 684 4.1e-73 2
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 183 3.1e-10 1
TAIR|locus:2197985 - symbol:AT1G26540 species:3702 "Arabi... 166 1.2e-08 1
TAIR|locus:2130878 - symbol:G2484-1 "G2484-1 protein" spe... 160 2.1e-06 2
TAIR|locus:2200146 - symbol:DUF2 "DOMAIN OF UNKNOWN FUNCT... 144 2.4e-06 1
TAIR|locus:2014505 - symbol:ATDUF1 "DOMAIN OF UNKNOWN FUN... 131 7.1e-05 1
TAIR|locus:2203018 - symbol:AT1G09320 species:3702 "Arabi... 136 8.3e-05 2
TAIR|locus:2084309 - symbol:AT3G06520 species:3702 "Arabi... 122 0.00040 1
TAIR|locus:2097134 - symbol:AT3G43990 species:3702 "Arabi... 119 0.00060 1
>TAIR|locus:2162117 [details] [associations]
symbol:AT5G55600 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0003677 Pfam:PF05641
InterPro:IPR014002 SMART:SM00743 UniGene:At.29433 UniGene:At.6552
EMBL:AF462815 EMBL:BT001005 IPI:IPI00518132 RefSeq:NP_001119443.1
RefSeq:NP_001190547.1 RefSeq:NP_200371.2 ProteinModelPortal:Q8W109
PRIDE:Q8W109 EnsemblPlants:AT5G55600.1 EnsemblPlants:AT5G55600.2
EnsemblPlants:AT5G55600.3 GeneID:835654 KEGG:ath:AT5G55600
TAIR:At5g55600 InParanoid:Q8W109 OMA:VPKQELA PhylomeDB:Q8W109
ProtClustDB:CLSN2690242 ArrayExpress:Q8W109 Genevestigator:Q8W109
Uniprot:Q8W109
Length = 663
Score = 1859 (659.5 bits), Expect = 7.5e-192, P = 7.5e-192
Identities = 345/577 (59%), Positives = 447/577 (77%)
Query: 1 MSGSGHCFVEWKEEFISQERGNRVVHYFLKDSAGESVLAVVGTERSVRHMFYVVAEEFVR 60
M + H FVEWKE F+SQERGNRVVHYFLKDSAGES+LAV+GTERSVRHMFYVV+EEFVR
Sbjct: 1 MCENDHHFVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVR 60
Query: 61 VYGAENSMHAGYKWRSRREVVDWLTSMLSKQHHQGDWSKSPKHDLAQASGSPECPMNGVS 120
++G ENS+H+G+KWRSRREVVDWLTSMLSKQ QG+WSKSPK + +++GSPE P NG +
Sbjct: 61 IHGPENSIHSGFKWRSRREVVDWLTSMLSKQSTQGNWSKSPKCESGESNGSPEFPSNGFT 120
Query: 121 ARKVQVADEMQGHLSRNINGQSSDIVWSGVAWTCGKQLKHFPAFCRNGTTISIQSFVFVM 180
A++ Q ++E++ L N+ S +I+WSG W CGKQLKH+P+FCRNGTTI +QSFVFV+
Sbjct: 121 AQRAQASEEVR--LPINLIIHSWEIMWSGAPWMCGKQLKHYPSFCRNGTTIGVQSFVFVL 178
Query: 181 AKGENHYVAYLEDMYEDKRGQKKVKVRWFHHNQEVKGVVSLRNPHPKEVFITPHSQVISA 240
+KGE+ YVAYLEDMYEDKRG KKVKVRWFH+ +EVKG V+L+NP+PKEVFITPHSQVISA
Sbjct: 179 SKGEDRYVAYLEDMYEDKRGLKKVKVRWFHYTKEVKGAVALKNPNPKEVFITPHSQVISA 238
Query: 241 ECVDGSASVLTREHFSKCLAAFPNALLARVHLCTRQFRSNRLKPFDLSKLHGYHDQPILS 300
ECVDG A+VLTREH+ +C+A+FPN+LLARVH+C RQ R++++KPFDLSKL GY DQPI+S
Sbjct: 239 ECVDGPATVLTREHYEECVASFPNSLLARVHMCYRQLRNSKVKPFDLSKLRGYLDQPIMS 298
Query: 301 LLNSNTLQETNSSGHLITGVGDETTAGENVKLGIKRTRRAKGSQTFLTDNSTVGIGRGSQ 360
L+S + + ++ +E + GENV +G +R+ + + ++D+
Sbjct: 299 CLSSMEAGPVDCAMNIEED--EEWSEGENVMVGAERSMKKRAR--IMSDHL--------- 345
Query: 361 LMTYKPSYKKLKCGLSGMSLLSLKHIEFLPWYSAMYKVNAKIELLCQDSGIRGCWFRCIV 420
L TY+ S K+LK SG S +++ P Y+ + K +AKIE LCQDSGIRGCWFRC V
Sbjct: 346 LTTYESSCKRLKLNASGKRFPSPTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFRCTV 405
Query: 421 LQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPTPPDNRED- 479
L VS+KQ+K++YDD++DEDG GNLEEW+P +K A PDKLG+R S+RPTIRP P D +
Sbjct: 406 LDVSRKQVKLQYDDIEDEDGYGNLEEWVPAFKSAMPDKLGIRLSNRPTIRPAPRDVKTAY 465
Query: 480 LSLGIGTAVDAWWSDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRISRDWAGD 539
L IG AVDAWW+DGWWEGVVI T++L++Y+ GE+L L V + D+RISRDW GD
Sbjct: 466 FDLTIGEAVDAWWNDGWWEGVVIATGKPDTEDLKIYIPGENLCLTVLRKDIRISRDWVGD 525
Query: 540 QWVDIEDKPDILSVISDTISPENKISLSSTIANDVKS 576
WVDI+ KP+IL+++S S E+K+S+ ST++ D K+
Sbjct: 526 SWVDIDPKPEILAIVSSDSSSESKLSMLSTLSKDTKA 562
>TAIR|locus:2026874 [details] [associations]
symbol:AT1G68580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0006333 "chromatin assembly or
disassembly" evidence=RCA] InterPro:IPR001025 Pfam:PF01426
PROSITE:PS51038 SMART:SM00439 INTERPRO:IPR008395 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0003677 Pfam:PF05641
InterPro:IPR014002 SMART:SM00743 EMBL:AY128327 EMBL:BT008396
IPI:IPI00516313 RefSeq:NP_177025.2 UniGene:At.47248
ProteinModelPortal:Q8L7Q0 PaxDb:Q8L7Q0 PRIDE:Q8L7Q0
EnsemblPlants:AT1G68580.2 GeneID:843187 KEGG:ath:AT1G68580
TAIR:At1g68580 eggNOG:NOG246853 HOGENOM:HOG000242436
InParanoid:Q8L7Q0 OMA:DLYEDSK PhylomeDB:Q8L7Q0
ProtClustDB:CLSN2680593 ArrayExpress:Q8L7Q0 Genevestigator:Q8L7Q0
Uniprot:Q8L7Q0
Length = 648
Score = 684 (245.8 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 173/506 (34%), Positives = 263/506 (51%)
Query: 86 SMLSKQHHQGD---WSKS-PKHDLAQASGSPECPMNGVSARKVQVADEMQGHLSRNINGQ 141
S+L K + + D W S ++ + P M A ++ M I Q
Sbjct: 63 SVLKKLNSKDDVALWLDSIVSGEIPHVADVPATVMTEKDAGGFNMSTFMNRKFQEPIQ-Q 121
Query: 142 SSDIVWSGVAWTCGKQLKHFPAFCRNGTTISIQSFVFVMAKGENHYVAYLEDMYEDKRGQ 201
W G +WTC K+ KH+ ++ RNG IS+ FV+V+A+ VAY+ED+YED +G+
Sbjct: 122 IKTFSWMGFSWTCRKRRKHYQSYLRNGVRISVNDFVYVLAEQHKRLVAYIEDLYEDSKGK 181
Query: 202 KKVKVRWFHHNQEVKGVVSLRNPHPKEVFITPHSQVISAECVDGSASVLTREHFSKCLAA 261
K V VRWFH +EV V+S + + +E+F + + Q IS EC+D A+VL+ +H+ K L
Sbjct: 182 KMVVVRWFHKTEEVGSVLS-DDDNDREIFFSLNRQDISIECIDYLATVLSPQHYEKFLKV 240
Query: 262 FPNALLARVHLCTRQFRSNRLKPFDLSKLHGYHDQPILSLLNSNTLQETNSSGHLITGVG 321
P + C + + + LKP+D+++L GY Q +L LN + L+ + G G
Sbjct: 241 -PMHVQTVAFFCQKLYGDDGLKPYDITQLEGYWRQEMLRYLNVSILK--SFEGAQAPGTD 297
Query: 322 DETTAGENVKLGIKRTRRAKGSQTFLTDNSTVGIGRGSQLMTYKPSYKKLKCGLSGMSLL 381
A +GI+ +R + S + S G +G K S + ++ S+
Sbjct: 298 PGLKAPLVGCVGIRSRKRRRPSPVGTLNVSYAGDMKGD----CKSSPDSV-LAVTDASIF 352
Query: 382 SLKHIEFLPWYSAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQD-EDG 440
K E S K + IE+L +DSGIRGCWF+ +VL+ + ++KV+Y D+QD +D
Sbjct: 353 --KGDE--DGSSHHIKKGSLIEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQDADDE 408
Query: 441 SGNLEEWIPVYKVAKPDKLG-MRCSDRPTIRPT-PPDNREDLS-LGIGTAVDAWWSDGWW 497
S LEEWI +VA D LG +R R +RP P D+ +G+G VD WW DGWW
Sbjct: 409 SKKLEEWILTSRVAAGDHLGDLRIKGRKVVRPMLKPSKENDVCVIGVGMPVDVWWCDGWW 468
Query: 498 EGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRISRDWAGDQWVDIEDKPDILS-VISD 556
EG+V V S + +VYL GE ++NDLR SR+W D+W++I + DI+S V+S
Sbjct: 469 EGIV--VQEVSEEKFEVYLPGEKKMSAFHRNDLRQSREWLDDEWLNIRSRSDIVSSVLSL 526
Query: 557 TISPENKISLSSTIANDVKSDGLDSC 582
T E ++ +D KS + C
Sbjct: 527 TKKKEMEVK------HDEKSSDVGVC 546
Score = 73 (30.8 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 11 WKEEFISQERGNRVVHYFLKDSAGESVLAVVGTERSVRHMFYVVAEEFVRVYGAENSMHA 70
W E + + VHY+L+ G + LAV+G ++ + M + R Y + +
Sbjct: 13 WNERHVKNTKEKMEVHYYLERKDGIADLAVIGRLKNSKRMSF-------R-YALKKNRSV 64
Query: 71 GYKWRSRREVVDWLTSMLSKQ-HHQGD 96
K S+ +V WL S++S + H D
Sbjct: 65 LKKLNSKDDVALWLDSIVSGEIPHVAD 91
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 183 (69.5 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 43/140 (30%), Positives = 74/140 (52%)
Query: 408 DSGIRGCWFRCIVLQVSQKQMK-VRYDDVQDEDGSGNLEEWIPVYKVAK--PDKLGMRCS 464
+ G G W+ V +++ + +RYD++ +DGSGNL E + V + + D + +
Sbjct: 29 EEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVETVDVSDIVEGLDDCTDVSDT 88
Query: 465 DRPTIRPTPPD-NREDLSLGIGTAVDAWWSDGWWEGVVIGVDSSSTDNLQVYLSGESLFL 523
R +RP PP + L+L G VD ++SD WWEGV+ ++ S + +V+ L
Sbjct: 89 FRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFDHENGS-EKRRVFFPDLGDEL 147
Query: 524 NVNKNDLRISRDW--AGDQW 541
+ + LRI++DW A + W
Sbjct: 148 DADLQSLRITQDWNEATETW 167
>TAIR|locus:2197985 [details] [associations]
symbol:AT1G26540 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005773 "vacuole" evidence=IDA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
INTERPRO:IPR008395 EMBL:CP002684 EMBL:AC013427 GO:GO:0005773
Pfam:PF05641 InterPro:IPR014002 SMART:SM00743 InterPro:IPR007930
Pfam:PF05266 HOGENOM:HOG000114080 EMBL:AK117551 IPI:IPI00540262
PIR:D86392 RefSeq:NP_173976.1 UniGene:At.41229
ProteinModelPortal:Q9FZD9 PRIDE:Q9FZD9 ProMEX:Q9FZD9
EnsemblPlants:AT1G26540.1 GeneID:839194 KEGG:ath:AT1G26540
TAIR:At1g26540 InParanoid:Q9FZD9 OMA:WINIPTV PhylomeDB:Q9FZD9
ProtClustDB:CLSN2679655 Genevestigator:Q9FZD9 Uniprot:Q9FZD9
Length = 695
Score = 166 (63.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 50/173 (28%), Positives = 75/173 (43%)
Query: 402 IELLCQDSGIRGCWFRCIVLQ----VSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPD 457
+E+ ++ G G WFR ++ + S+++++VRY + D DGS L E I
Sbjct: 14 VEVSSEEEGFEGAWFRAVLEENPGNSSRRKLRVRYSTLLDMDGSSPLIEHI--------- 64
Query: 458 KLGMRCSDRPTIRPTPPDNRE--DLSLGIGTAVDAWWSDGWWEGVVIGVDSSSTDNLQVY 515
++ IRP PP+ + D+ L G VDA DGWW GVV V DN VY
Sbjct: 65 -------EQRFIRPVPPEENQQKDVVLEEGLLVDADHKDGWWTGVV--VKKMEDDNYLVY 115
Query: 516 LSGESLFLNVNKNDLRISRDWAGDQWVDIEDKPDILSVISDTISPENKISLSS 568
+ + LR W G W+ +P+I SP + + S
Sbjct: 116 FDLPPDIIQFERKQLRTHLIWTGGTWI----QPEIEESNKSMFSPGTMVEVFS 164
>TAIR|locus:2130878 [details] [associations]
symbol:G2484-1 "G2484-1 protein" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
INTERPRO:IPR008395 GO:GO:0009506 EMBL:CP002687 Pfam:PF05641
InterPro:IPR014002 SMART:SM00743 IPI:IPI00518294 RefSeq:NP_193464.5
UniGene:At.23026 PRIDE:F4JP43 EnsemblPlants:AT4G17330.1
GeneID:827445 KEGG:ath:AT4G17330 OMA:VAWFSAK Uniprot:F4JP43
Length = 2037
Score = 160 (61.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 55/232 (23%), Positives = 98/232 (42%)
Query: 397 KVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKP 456
K + +E+ ++ G+R W+ VL + + V + D+ E G+ L+EW+ + K
Sbjct: 1574 KEGSNVEVFKEEPGLRTAWYSANVLSLEDDKAYVLFSDLSVEQGTDKLKEWVAL-KGEGD 1632
Query: 457 DKLGMRCSDRPTIRPTPPDN-REDLSLG-----IGTAVDAWWSDGWWEGVVIGVDSSSTD 510
+R + T P R +LG IG VD+W D W EGV+ + +
Sbjct: 1633 QAPKIRPARSVTALPYEGTRKRRRAALGDHIWKIGDRVDSWVHDSWLEGVITEKNKKDEN 1692
Query: 511 NLQVYLSGESLFLNVNKNDLRISRDWAGDQWVDIEDKPDILSVISDTISPENKISLSST- 569
+ V+ E L + +LR S W +W++ + +S + +P+ K T
Sbjct: 1693 TVTVHFPAEEETLTIKAWNLRPSLVWKDGKWIECSSSGETISSSHEGDTPKEKRPRLGTP 1752
Query: 570 -IANDVKSDGL----DSCI-EVPITTKLDT-VEEGKPNLASLTCSDTLPEDL 614
+ +VK + D + + P T L+ V E N+ T + P+ L
Sbjct: 1753 ALVAEVKDTSMKIVDDPDLGKPPQTGVLNLGVSENTFNIGKSTREENKPDPL 1804
Score = 43 (20.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 16/78 (20%), Positives = 35/78 (44%)
Query: 177 VFVMAKGENHYVAYLEDMYEDKRG--QKKVKVRWFHHNQEVKGVVSLR-NPHPKEVFITP 233
+ V E+ Y++ ++ M E + G KK ++ + L N + ++ +
Sbjct: 433 IHVFETSESVYISTMDSMVEAREGGVSKKSDNEGSARTSNLEQSMELPVNANDRDQDVK- 491
Query: 234 HSQVISAECVDGSASVLT 251
+SQ++S V GS ++
Sbjct: 492 NSQILSESVVSGSVGYVS 509
>TAIR|locus:2200146 [details] [associations]
symbol:DUF2 "DOMAIN OF UNKNOWN FUNCTION 724 2"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] INTERPRO:IPR008395
EMBL:CP002684 Pfam:PF05641 InterPro:IPR014002 SMART:SM00743
IPI:IPI00536326 RefSeq:NP_172609.1 UniGene:At.51568
ProteinModelPortal:F4I8W1 PRIDE:F4I8W1 EnsemblPlants:AT1G11420.1
GeneID:837684 KEGG:ath:AT1G11420 OMA:MESCAKD InterPro:IPR007930
Pfam:PF05266 Uniprot:F4I8W1
Length = 604
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 43/160 (26%), Positives = 73/160 (45%)
Query: 401 KIELLCQDSGIRGCWFRCIV----LQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKP 456
K+E+ ++ ++G ++R I+ + ++KVRY +E L E++
Sbjct: 12 KVEVFSEEEELKGSYYRAILEDNPTKSGHNKLKVRYLTQLNEHRLAPLTEFV-------- 63
Query: 457 DKLGMRCSDRPTIRPTPPDNREDLSLGI-GTAVDAWWSDGWWEGVVIGVDSSSTDNLQVY 515
D+ IRP P ++ D + + G VDA+ DGWW GVV V + + VY
Sbjct: 64 --------DQRFIRPVPSEDVNDGVVFVEGLMVDAYLKDGWWTGVV--VKTMEDEKFLVY 113
Query: 516 LSGESLFLNVNKNDLRISRDWAGDQWVDIEDKPDILSVIS 555
+ K LR+ DW G +W+ ++K + SV S
Sbjct: 114 FDCPPDIIQFEKKKLRVHLDWTGFKWIRPDNKELVKSVFS 153
>TAIR|locus:2014505 [details] [associations]
symbol:ATDUF1 "DOMAIN OF UNKNOWN FUNCTION 724 1"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR008395 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC005278 Pfam:PF05641
InterPro:IPR014002 SMART:SM00743 InterPro:IPR007930 Pfam:PF05266
HOGENOM:HOG000114080 ProtClustDB:CLSN2679655 IPI:IPI00521919
PIR:E86164 RefSeq:NP_171829.1 UniGene:At.42551
ProteinModelPortal:Q9ZVT1 EnsemblPlants:AT1G03300.1 GeneID:838627
KEGG:ath:AT1G03300 TAIR:At1g03300 eggNOG:NOG245760
InParanoid:Q9ZVT1 OMA:KDCEVEI PhylomeDB:Q9ZVT1
Genevestigator:Q9ZVT1 Uniprot:Q9ZVT1
Length = 670
Score = 131 (51.2 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 69/267 (25%), Positives = 108/267 (40%)
Query: 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQV----SQKQMKVRYDDVQDEDGSGNLEEWIP 449
A++K + ++E+ ++ G R W+R I+ + + + K+R+ + S N E
Sbjct: 2 AIFK-DCEVEIFSEEDGFRNAWYRAILEETPTNPTSESKKLRFSYMTK---SLNKEG--- 54
Query: 450 VYKVAKPDKLGMRCSDRPTIRPTPPDNRED-LSLGIGTAVDAWWSDGWWEGVVIGVDSSS 508
+ P + R IRP PP+N + + GT VDA + W GVVI +
Sbjct: 55 ---SSSPPTVEQRF-----IRPVPPENLYNGVVFEEGTMVDADYKHRWRTGVVI--NKME 104
Query: 509 TDNLQVYLSGESLFLNVNKNDLRISRDWAGDQWVDIEDK--------PDILSVISDTISP 560
D+ V + LR DW G +WV E + P L +S I
Sbjct: 105 NDSYLVLFDCPPDIIQFETKHLRAHLDWTGSEWVQPEVRELSKSMFSPGTLVEVSCVIDK 164
Query: 561 ENKISLSSTIANDVKSDGLDSCIEVPITTK-LDT-VEEGKPNLA-SLTCSDTLPE----- 612
+++ I +++ G I V + K L V+E KPN+ C P
Sbjct: 165 VEVSWVTAMIVKEIEESGEKKFI-VKVCNKHLSCRVDEAKPNMTVDSCCVRPRPPLFFVE 223
Query: 613 --DL-DCVNEEKAPSLEQGSGQGVDHV 636
DL DCV S QG +GV H+
Sbjct: 224 EYDLRDCVEVFHGSSWRQGVVKGV-HI 249
>TAIR|locus:2203018 [details] [associations]
symbol:AT1G09320 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0009688 "abscisic acid biosynthetic process" evidence=RCA]
INTERPRO:IPR008395 EMBL:CP002684 GenomeReviews:CT485782_GR
Pfam:PF05641 InterPro:IPR014002 SMART:SM00743 EMBL:BT022112
IPI:IPI00538316 RefSeq:NP_172403.3 UniGene:At.42230
ProteinModelPortal:Q500V5 SMR:Q500V5 EnsemblPlants:AT1G09320.1
GeneID:837453 KEGG:ath:AT1G09320 TAIR:At1g09320 eggNOG:NOG262633
HOGENOM:HOG000136721 InParanoid:Q500V5 OMA:AFYNDGW PhylomeDB:Q500V5
ProtClustDB:CLSN2918468 Genevestigator:Q500V5 Uniprot:Q500V5
Length = 517
Score = 136 (52.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 37/147 (25%), Positives = 66/147 (44%)
Query: 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVA 454
M+ +E+ + G +GCWF V++ + + + +D +E P+
Sbjct: 220 MFSSGTVVEVSSDEEGFQGCWFAAKVVEPVGEDKFLV--EYRDLREKDGIE---PL---- 270
Query: 455 KPDKLGMRCSDRPTIRPTPPDNREDLSLGIGTAVDAWWSDGWWEGVVIGVDSSSTDNLQV 514
K + +D IRP PP + ED+ +G ++A+++DGWW GVVI D + +
Sbjct: 271 KEE------TDFLHIRPPPPRD-EDIDFAVGDKINAFYNDGWWVGVVI--DGMKHGTVGI 321
Query: 515 YLSGESLFLNVNKNDLRISRDWAGDQW 541
Y + + LR+ +DW W
Sbjct: 322 YFRQSQEKMRFGRQGLRLHKDWVDGTW 348
Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
Identities = 39/156 (25%), Positives = 65/156 (41%)
Query: 389 LPWYSAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWI 448
LP Y K + +E+ + G RG W+ V+ + K D V+ + E+
Sbjct: 35 LPSY---LKPGSAVEISSDEIGFRGSWYMGKVITIPSSSDK---DSVKCQ------VEYT 82
Query: 449 PVYKVAKPDKLGMRCSDRPTIRP-TPP--DNREDLSLGIGTAVDAWWSDGWWEGVVIGVD 505
++ + K D +RP PP + + + +G VDA+++DGWWEG V V
Sbjct: 83 TLFFDKEGTKPLKEVVDMSQLRPPAPPMSEIEKKKKIVVGEEVDAFYNDGWWEGDVTEVL 142
Query: 506 SSSTDNLQVYLSGESLFLNVNKNDLRISRDWAGDQW 541
V+ + K++LR R+W W
Sbjct: 143 DDG--KFSVFFRSSKEQIRFRKDELRFHREWVDGAW 176
Score = 38 (18.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 194 MYEDKRGQKKVKVRWFHHNQEVKGVVSLRNPHPKEVFITPHSQVISAECVD 244
++ DK G K +K EV + LR P P I +++ E VD
Sbjct: 84 LFFDKEGTKPLK--------EVVDMSQLRPPAPPMSEIEKKKKIVVGEEVD 126
>TAIR|locus:2084309 [details] [associations]
symbol:AT3G06520 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] INTERPRO:IPR008395 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AC020580 Pfam:PF05641
InterPro:IPR014002 SMART:SM00743 IPI:IPI00532691 RefSeq:NP_187304.1
UniGene:At.11886 UniGene:At.48622 ProteinModelPortal:Q9C8Z3
SMR:Q9C8Z3 EnsemblPlants:AT3G06520.1 GeneID:819830
KEGG:ath:AT3G06520 TAIR:At3g06520 eggNOG:NOG319881
HOGENOM:HOG000152220 InParanoid:Q9C8Z3 OMA:YCARILC PhylomeDB:Q9C8Z3
ProtClustDB:CLSN2684661 Genevestigator:Q9C8Z3 Uniprot:Q9C8Z3
Length = 466
Score = 122 (48.0 bits), Expect = 0.00040, P = 0.00040
Identities = 54/196 (27%), Positives = 84/196 (42%)
Query: 396 YKVNAKIELLCQDSGIRGCWF--RCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKV 453
Y+ A +E+ ++ +G W+ R + L K + V + +DG E IP+ V
Sbjct: 169 YEKGALVEVRSEEKAYKGSWYCARILCLLGDDKYI-VEHLKFSRDDG-----ESIPLRDV 222
Query: 454 AKPDKLGMRCSDRPTIRPTPPDNREDL-SLGIGTAVDAWWSDGWWEGVVIGVDSSSTDNL 512
+ D IRP PP + G VDAW++ WW V V ++
Sbjct: 223 VE-------AKD---IRPVPPSELSPVVCYEPGVIVDAWFNKRWWTSRVSKVLGGGSNKY 272
Query: 513 QVYL--SGE-SLFLNVNKNDLRISRDWAGDQWVDIEDKPDILSVISDTISPENKISLSST 569
V++ +GE + LN N LR +DW QWV I K + V + P K S
Sbjct: 273 SVFIISTGEETTILNFN---LRPHKDWINGQWV-IPSKV-LTDVPEECYKPPLKKLKSCE 327
Query: 570 IANDVKSDGLDSCIEV 585
A V ++G++ +EV
Sbjct: 328 RAEKVFNNGME--VEV 341
>TAIR|locus:2097134 [details] [associations]
symbol:AT3G43990 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001025 InterPro:IPR003618 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.472.30 EMBL:AL163975 HOGENOM:HOG000237923
ProtClustDB:CLSN2683146 IPI:IPI00530281 PIR:T48953
RefSeq:NP_189985.1 UniGene:At.53714 ProteinModelPortal:Q9LXW1
SMR:Q9LXW1 PaxDb:Q9LXW1 PRIDE:Q9LXW1 EnsemblPlants:AT3G43990.1
GeneID:823516 KEGG:ath:AT3G43990 TAIR:At3g43990 eggNOG:NOG279418
OMA:KCERMSS PhylomeDB:Q9LXW1 Genevestigator:Q9LXW1 Uniprot:Q9LXW1
Length = 380
Score = 119 (46.9 bits), Expect = 0.00060, P = 0.00060
Identities = 35/132 (26%), Positives = 67/132 (50%)
Query: 122 RKVQVADEMQGHLSRNINGQSSDIVWS-G--VAWTCGKQLK--HFPAFCRNGTTISIQSF 176
R+V+ + EMQ + SD S G + +T Q K H+ F +G ++ F
Sbjct: 30 RRVEESKEMQVKKKAKFEQRPSDCAKSIGKPIKFTGKGQNKKCHYETFEFHGKQYRLKDF 89
Query: 177 VFVMAKG--ENHYVAYLEDMY-EDKRGQKKVKVRWFHHNQEV--KGVVSLRNPHPKEVFI 231
V + + + Y+A ++D+Y ++K G K++V+WF+ +++ K + +P+E+F
Sbjct: 90 VLLYPEDNKQKEYIAIIKDIYSQEKDGLVKMEVQWFYRREDIEEKHFGKWKTENPREIFF 149
Query: 232 TPHSQVISAECV 243
+ H + AE V
Sbjct: 150 SFHCDEVFAESV 161
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 686 673 0.0010 120 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 631 (67 KB)
Total size of DFA: 403 KB (2194 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.22u 0.13s 58.35t Elapsed: 00:00:07
Total cpu time: 58.23u 0.13s 58.36t Elapsed: 00:00:07
Start: Thu May 9 19:01:12 2013 End: Thu May 9 19:01:19 2013