Query 044464
Match_columns 686
No_of_seqs 159 out of 257
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 05:34:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044464.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044464hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w4s_A Polybromo, polybromo 1 99.9 6.7E-23 2.3E-27 197.4 2.6 131 146-280 2-135 (174)
2 3av4_A DNA (cytosine-5)-methyl 99.6 3.9E-16 1.3E-20 188.0 6.7 148 139-289 438-595 (1330)
3 3swr_A DNA (cytosine-5)-methyl 99.6 5.5E-16 1.9E-20 182.7 6.6 146 139-287 127-281 (1002)
4 3h8z_A FragIle X mental retard 99.5 3E-13 1E-17 125.8 13.7 106 397-533 3-117 (128)
5 4dov_A ORC1, origin recognitio 99.2 5.5E-12 1.9E-16 121.3 6.5 140 143-286 5-161 (163)
6 4ft4_B DNA (cytosine-5)-methyl 98.8 1.3E-09 4.6E-14 124.6 4.4 96 157-252 44-146 (784)
7 3swr_A DNA (cytosine-5)-methyl 98.4 1.8E-07 6.1E-12 111.0 4.8 121 158-279 322-493 (1002)
8 3h8z_A FragIle X mental retard 98.3 1.2E-06 4.2E-11 81.5 8.5 63 393-476 58-121 (128)
9 3av4_A DNA (cytosine-5)-methyl 98.0 8.5E-07 2.9E-11 107.8 1.5 122 158-280 634-805 (1330)
10 1m4z_A Origin recognition comp 97.5 6.2E-05 2.1E-09 76.5 5.1 136 167-305 49-217 (238)
11 1mhn_A SurviVal motor neuron p 97.5 0.00037 1.3E-08 56.1 8.2 54 395-474 3-58 (59)
12 2fl7_A Regulatory protein SIR3 97.3 5.7E-05 1.9E-09 76.5 1.9 135 167-306 49-218 (232)
13 1g5v_A SurviVal motor neuron p 97.0 0.002 6.8E-08 56.4 8.4 56 394-475 9-66 (88)
14 2equ_A PHD finger protein 20-l 97.0 0.0013 4.5E-08 55.8 7.0 54 394-475 8-62 (74)
15 3sd4_A PHD finger protein 20; 97.0 0.0021 7E-08 53.4 7.7 51 392-451 9-61 (69)
16 3db3_A E3 ubiquitin-protein li 97.0 0.0061 2.1E-07 58.6 11.8 89 393-505 8-123 (161)
17 3ask_A E3 ubiquitin-protein li 96.9 0.0038 1.3E-07 63.1 10.5 88 395-506 2-107 (226)
18 4a4f_A SurviVal of motor neuro 96.9 0.0031 1.1E-07 51.6 7.8 49 393-451 6-56 (64)
19 2d9t_A Tudor domain-containing 96.9 0.0024 8.1E-08 54.3 7.1 56 394-475 8-65 (78)
20 3s6w_A Tudor domain-containing 96.7 0.0051 1.7E-07 48.4 7.7 47 395-451 1-49 (54)
21 3pnw_C Tudor domain-containing 96.7 0.0058 2E-07 52.0 8.0 56 394-475 16-73 (77)
22 2eqm_A PHD finger protein 20-l 96.5 0.011 3.9E-07 51.5 9.0 50 393-451 17-68 (88)
23 2biv_A SCML2 protein, sex COMB 96.3 0.12 4.2E-06 52.5 16.9 116 393-520 60-210 (243)
24 2lcc_A AT-rich interactive dom 96.3 0.013 4.5E-07 49.9 8.2 55 394-454 4-62 (76)
25 1oz2_A Lethal(3)malignant brai 96.2 0.094 3.2E-06 55.5 15.5 116 393-520 39-187 (331)
26 2f5k_A MORF-related gene 15 is 96.1 0.01 3.6E-07 53.3 6.6 53 393-455 20-76 (102)
27 3fdr_A Tudor and KH domain-con 96.1 0.013 4.3E-07 50.7 7.0 56 394-475 26-82 (94)
28 3s6w_A Tudor domain-containing 96.0 0.013 4.6E-07 46.0 6.4 51 481-532 1-53 (54)
29 2r58_A Polycomb protein SCM; M 96.0 0.2 7E-06 51.6 16.9 118 393-521 32-183 (265)
30 3dlm_A Histone-lysine N-methyl 96.0 0.049 1.7E-06 54.6 11.6 121 395-546 8-137 (213)
31 2eqk_A Tudor domain-containing 95.8 0.019 6.6E-07 50.1 6.9 57 393-475 19-76 (85)
32 2eko_A Histone acetyltransfera 95.7 0.037 1.3E-06 48.4 8.2 56 393-453 7-66 (87)
33 1mhn_A SurviVal motor neuron p 95.7 0.042 1.4E-06 44.0 7.9 51 481-532 3-55 (59)
34 3mea_A SAGA-associated factor 95.6 0.2 6.9E-06 49.1 14.2 107 393-520 42-157 (180)
35 3qii_A PHD finger protein 20; 95.5 0.027 9.2E-07 49.2 6.6 55 393-475 19-74 (85)
36 4a4f_A SurviVal of motor neuro 95.5 0.059 2E-06 44.0 8.2 53 480-533 7-61 (64)
37 3p8d_A Medulloblastoma antigen 95.4 0.036 1.2E-06 46.4 6.7 54 394-475 5-59 (67)
38 2ro0_A Histone acetyltransfera 95.2 0.051 1.7E-06 47.9 7.6 51 393-453 21-75 (92)
39 3qii_A PHD finger protein 20; 95.2 0.044 1.5E-06 47.9 6.9 52 479-533 19-71 (85)
40 3p8d_A Medulloblastoma antigen 94.9 0.062 2.1E-06 45.0 6.9 50 481-533 6-56 (67)
41 2ldm_A Uncharacterized protein 93.8 0.0048 1.7E-07 53.4 0.0 46 394-451 5-51 (81)
42 3ut1_A Lethal(3)malignant brai 94.8 0.49 1.7E-05 50.0 15.1 115 393-519 34-181 (324)
43 2rnz_A Histone acetyltransfera 94.7 0.07 2.4E-06 47.4 7.1 51 393-453 23-77 (94)
44 2equ_A PHD finger protein 20-l 94.7 0.078 2.7E-06 45.0 7.0 60 480-542 8-69 (74)
45 1g5v_A SurviVal motor neuron p 94.6 0.097 3.3E-06 45.7 7.7 53 480-533 9-63 (88)
46 2diq_A Tudor and KH domain-con 94.6 0.026 8.8E-07 50.1 4.2 47 395-451 32-79 (110)
47 3mp6_A MBP, SGF29, maltose-bin 94.6 0.32 1.1E-05 52.9 13.6 111 391-521 383-497 (522)
48 1oz2_A Lethal(3)malignant brai 94.5 0.57 2E-05 49.5 14.7 117 393-521 146-292 (331)
49 2d9t_A Tudor domain-containing 94.4 0.12 4.1E-06 43.8 7.7 53 480-533 8-62 (78)
50 3feo_A MBT domain-containing p 94.2 0.53 1.8E-05 51.6 14.1 116 393-520 153-294 (437)
51 3f70_A Lethal(3)malignant brai 94.1 0.49 1.7E-05 52.2 13.6 119 394-520 39-192 (456)
52 3pnw_C Tudor domain-containing 94.0 0.12 4.1E-06 43.8 6.8 53 480-533 16-70 (77)
53 3fdr_A Tudor and KH domain-con 93.6 0.17 5.7E-06 43.6 7.0 51 480-532 26-78 (94)
54 1wgs_A MYST histone acetyltran 93.6 0.16 5.5E-06 47.4 7.4 52 393-453 10-67 (133)
55 3m9q_A Protein MALE-specific l 93.1 0.2 6.8E-06 45.0 6.9 59 393-456 17-84 (101)
56 2ldm_A Uncharacterized protein 92.2 0.017 5.8E-07 50.0 0.0 51 480-533 5-56 (81)
57 2lrq_A Protein MRG15, NUA4 com 91.9 0.02 6.8E-07 49.8 0.0 54 393-456 10-67 (85)
58 3feo_A MBT domain-containing p 92.7 1.7 5.8E-05 47.7 14.9 118 394-519 41-193 (437)
59 2eqm_A PHD finger protein 20-l 92.5 0.51 1.7E-05 41.1 8.5 51 468-520 7-58 (88)
60 2wac_A CG7008-PA; unknown func 92.3 0.27 9.1E-06 47.3 7.2 47 395-451 51-97 (218)
61 3dlm_A Histone-lysine N-methyl 91.7 6.7 0.00023 39.4 16.5 110 395-520 68-194 (213)
62 4b9w_A TDRD1, tudor domain-con 91.5 0.4 1.4E-05 46.4 7.5 47 395-451 65-112 (201)
63 3ut1_A Lethal(3)malignant brai 91.3 3.7 0.00013 43.3 15.0 119 393-521 141-287 (324)
64 2diq_A Tudor and KH domain-con 90.9 0.32 1.1E-05 43.0 5.7 52 480-533 31-84 (110)
65 1wjq_A KIAA1798 protein; MBT d 90.8 0.61 2.1E-05 42.2 7.4 52 393-451 11-62 (107)
66 3h6z_A Polycomb protein SFMBT; 90.7 2.8 9.4E-05 46.2 13.9 130 394-532 35-207 (447)
67 4b9x_A TDRD1, tudor domain-con 90.7 0.61 2.1E-05 46.0 8.1 47 395-451 65-112 (226)
68 3m9p_A MALE-specific lethal 3 90.6 0.57 1.9E-05 42.7 7.0 59 393-456 17-84 (110)
69 2eqk_A Tudor domain-containing 90.6 0.85 2.9E-05 39.9 7.8 53 479-533 19-73 (85)
70 2lcd_A AT-rich interactive dom 89.9 0.05 1.7E-06 49.9 0.0 97 394-530 5-103 (118)
71 2l8d_A Lamin-B receptor; DNA b 90.5 0.89 3.1E-05 37.9 7.4 52 480-533 8-61 (66)
72 2hqx_A P100 CO-activator tudor 90.3 0.49 1.7E-05 46.8 7.0 46 395-451 65-111 (246)
73 1ng2_A Neutrophil cytosolic fa 90.2 0.62 2.1E-05 44.8 7.4 93 393-501 27-121 (193)
74 3f70_A Lethal(3)malignant brai 89.5 2.1 7.3E-05 47.2 11.8 119 393-520 151-298 (456)
75 2dig_A Lamin-B receptor; tudor 89.4 1.3 4.5E-05 37.1 7.6 52 480-533 11-64 (68)
76 2bud_A Males-absent on the fir 89.1 0.66 2.2E-05 41.1 6.0 63 398-474 17-87 (92)
77 3db3_A E3 ubiquitin-protein li 89.1 0.74 2.5E-05 44.4 6.8 59 479-537 8-91 (161)
78 3ntk_A Maternal protein tudor; 89.0 0.69 2.4E-05 43.8 6.7 40 395-437 47-87 (169)
79 3sd4_A PHD finger protein 20; 87.8 2 6.7E-05 35.4 7.8 40 479-519 10-50 (69)
80 1ri0_A Hepatoma-derived growth 86.9 1.7 6E-05 38.9 7.5 58 478-535 16-78 (110)
81 2xk0_A Polycomb protein PCL; t 86.4 2.5 8.7E-05 35.6 7.6 58 470-531 4-62 (69)
82 2dig_A Lamin-B receptor; tudor 85.7 3 0.0001 35.0 7.6 55 393-474 10-66 (68)
83 3h6z_A Polycomb protein SFMBT; 85.6 9.1 0.00031 42.1 13.8 116 393-519 154-306 (447)
84 4hcz_A PHD finger protein 1; p 85.4 3.7 0.00013 33.6 7.9 46 394-451 2-49 (58)
85 3llr_A DNA (cytosine-5)-methyl 85.1 1.5 5.1E-05 41.9 6.5 59 478-536 13-77 (154)
86 4fu6_A PC4 and SFRS1-interacti 85.1 0.97 3.3E-05 42.5 5.1 56 479-534 20-80 (153)
87 3qby_A Hepatoma-derived growth 85.0 1.2 4.2E-05 38.8 5.4 56 480-535 4-64 (94)
88 3bdl_A Staphylococcal nuclease 84.6 1.2 4.2E-05 49.6 6.6 46 395-451 411-457 (570)
89 2wac_A CG7008-PA; unknown func 83.9 2.8 9.4E-05 40.2 7.9 50 480-532 50-101 (218)
90 3ask_A E3 ubiquitin-protein li 82.9 2.1 7.2E-05 43.3 6.8 53 482-534 3-67 (226)
91 1khc_A DNA cytosine-5 methyltr 82.6 2.4 8.2E-05 40.0 6.7 57 479-535 9-71 (147)
92 2hqx_A P100 CO-activator tudor 82.6 2.7 9.3E-05 41.4 7.5 101 411-533 14-116 (246)
93 2gfu_A DNA mismatch repair pro 82.5 2.9 0.0001 38.4 7.1 68 467-537 11-88 (134)
94 2daq_A WHSC1L1 protein, isofor 78.5 3.6 0.00012 36.4 6.1 58 479-536 6-73 (110)
95 1wjr_A KIAA1617 protein; MBT d 78.3 3.9 0.00013 37.8 6.4 53 394-451 10-62 (127)
96 2k3y_A Chromatin modification- 78.0 3.5 0.00012 38.8 6.0 52 393-454 7-100 (136)
97 2l89_A PWWP domain-containing 78.0 3.6 0.00012 36.6 6.0 56 479-534 3-68 (108)
98 2xk0_A Polycomb protein PCL; t 78.0 5.5 0.00019 33.5 6.6 47 393-451 13-59 (69)
99 2m0o_A PHD finger protein 1; t 76.6 11 0.00038 32.4 8.1 42 479-521 24-66 (79)
100 2eyz_A V-CRK sarcoma virus CT1 76.1 2.2 7.7E-05 43.7 4.6 24 479-502 255-280 (304)
101 2biv_A SCML2 protein, sex COMB 75.9 6.2 0.00021 40.0 7.7 52 393-451 169-220 (243)
102 3oa6_A MALE-specific lethal 3 75.9 6.6 0.00022 35.8 7.0 57 393-454 17-82 (110)
103 1ssf_A Transformation related 74.3 13 0.00044 35.7 8.9 102 397-536 10-116 (156)
104 1h3z_A Hypothetical 62.8 kDa p 74.2 4.4 0.00015 35.9 5.4 56 479-534 4-71 (109)
105 2f5k_A MORF-related gene 15 is 73.6 6.2 0.00021 35.4 6.2 39 480-518 21-60 (102)
106 2eqj_A Metal-response element- 73.2 17 0.00058 30.4 8.3 51 480-532 12-63 (66)
107 2lj0_A Sorbin and SH3 domain-c 72.2 4.8 0.00016 32.6 4.7 33 471-503 14-48 (65)
108 2eqj_A Metal-response element- 70.8 9 0.00031 32.1 6.1 46 393-450 11-58 (66)
109 4b9w_A TDRD1, tudor domain-con 70.4 8.4 0.00029 37.1 6.9 50 481-532 65-116 (201)
110 2l8d_A Lamin-B receptor; DNA b 69.1 20 0.00068 30.0 7.7 48 393-451 7-56 (66)
111 2r58_A Polycomb protein SCM; M 68.6 11 0.00037 38.8 7.6 52 393-451 141-192 (265)
112 1jo8_A ABP1P, actin binding pr 68.4 7 0.00024 29.9 4.8 25 478-502 15-41 (58)
113 2bz8_A SH3-domain kinase bindi 68.0 7.2 0.00025 29.9 4.8 24 478-501 16-41 (58)
114 4b9x_A TDRD1, tudor domain-con 67.9 8.5 0.00029 37.8 6.4 50 481-532 65-116 (226)
115 2g3r_A Tumor suppressor P53-bi 67.7 78 0.0027 29.3 13.3 97 398-530 7-106 (123)
116 2csi_A RIM-BP2, RIM binding pr 67.2 6.8 0.00023 31.9 4.7 24 478-501 29-55 (76)
117 1w70_A Neutrophil cytosol fact 67.1 7.5 0.00026 30.1 4.7 24 478-501 19-44 (60)
118 1uti_A GRB2-related adaptor pr 66.9 7.8 0.00027 29.6 4.8 24 478-501 16-41 (58)
119 1oot_A Hypothetical 40.4 kDa p 66.9 7.8 0.00027 29.8 4.8 24 478-501 18-45 (60)
120 2ege_A Uncharacterized protein 66.9 5.9 0.0002 32.2 4.3 24 478-501 29-55 (75)
121 3ntk_A Maternal protein tudor; 66.4 11 0.00039 35.4 6.7 48 481-532 47-96 (169)
122 3bdl_A Staphylococcal nuclease 65.5 11 0.00038 42.0 7.5 100 412-533 361-462 (570)
123 1tg0_A BBC1 protein, myosin ta 65.3 8.7 0.0003 30.4 4.9 26 478-503 22-49 (68)
124 1zx6_A YPR154WP; SH3 domain, p 64.8 9.1 0.00031 29.3 4.8 24 478-501 17-42 (58)
125 1zuy_A Myosin-5 isoform; SH3 d 64.6 9.3 0.00032 29.0 4.8 25 478-502 16-42 (58)
126 1k4u_S Phagocyte NADPH oxidase 64.3 7.7 0.00026 30.1 4.3 23 478-500 20-44 (62)
127 2ydl_A SH3 domain-containing k 64.0 8.9 0.0003 30.9 4.8 24 478-501 17-44 (69)
128 2xmf_A Myosin 1E SH3; motor pr 63.6 9.6 0.00033 29.4 4.7 24 478-501 20-45 (60)
129 1sem_A SEM-5; SRC-homology 3 ( 63.5 9.8 0.00033 29.0 4.7 24 478-501 17-42 (58)
130 1y0m_A 1-phosphatidylinositol- 63.4 9.9 0.00034 29.4 4.8 24 478-501 18-43 (61)
131 2qqr_A JMJC domain-containing 63.1 67 0.0023 29.5 10.9 105 394-530 4-110 (118)
132 2k9g_A SH3 domain-containing k 63.0 9.3 0.00032 30.6 4.7 24 478-501 24-51 (73)
133 1ue9_A Intersectin 2; beta bar 62.7 10 0.00036 30.9 5.0 26 478-503 22-49 (80)
134 2g6f_X RHO guanine nucleotide 62.3 11 0.00036 29.0 4.7 24 478-501 19-44 (59)
135 1uj0_A Signal transducing adap 62.2 11 0.00036 29.4 4.8 24 478-501 20-45 (62)
136 2j6f_A CD2-associated protein; 61.9 9.1 0.00031 29.8 4.3 24 478-501 16-42 (62)
137 2oaw_A Spectrin alpha chain, b 61.7 12 0.0004 29.0 4.9 26 478-503 16-43 (65)
138 2jt4_A Cytoskeleton assembly c 61.6 10 0.00035 30.0 4.7 25 478-502 21-48 (71)
139 3rnj_A Brain-specific angiogen 61.5 8.9 0.00031 30.2 4.3 23 480-502 25-50 (67)
140 2fpe_A C-JUN-amino-terminal ki 61.5 9.9 0.00034 29.5 4.5 24 478-501 18-43 (62)
141 2ew3_A SH3-containing GRB2-lik 61.3 11 0.00037 30.3 4.8 24 478-501 18-43 (68)
142 2gnc_A SLIT-ROBO RHO GTPase-ac 60.9 9.7 0.00033 29.4 4.3 24 478-501 21-46 (60)
143 2jte_A CD2-associated protein; 60.8 12 0.00039 29.2 4.8 24 478-501 21-48 (64)
144 1zlm_A Osteoclast stimulating 60.7 12 0.0004 28.7 4.7 24 478-501 18-43 (58)
145 2dl4_A Protein STAC; SH3 domai 60.7 11 0.00038 29.9 4.7 25 477-501 21-47 (68)
146 2rf0_A Mitogen-activated prote 60.7 9.2 0.00031 32.6 4.5 25 478-502 44-75 (89)
147 2vwf_A Growth factor receptor- 60.3 12 0.00042 28.4 4.8 24 478-501 17-42 (58)
148 1wie_A RIM binding protein 2; 60.1 7.9 0.00027 33.1 4.0 24 478-501 38-64 (96)
149 2ak5_A RHO guanine nucleotide 59.3 13 0.00044 28.9 4.8 24 478-501 21-46 (64)
150 2djq_A SH3 domain containing r 59.2 15 0.00052 28.9 5.3 24 478-501 22-47 (68)
151 4hcz_A PHD finger protein 1; p 59.1 29 0.00098 28.4 6.7 40 481-521 3-43 (58)
152 3u23_A CD2-associated protein; 58.9 11 0.00038 29.1 4.3 24 478-501 22-47 (65)
153 2dl3_A Sorbin and SH3 domain-c 58.5 12 0.0004 29.5 4.5 23 478-500 22-46 (68)
154 2ed1_A 130 kDa phosphatidylino 58.4 11 0.00038 30.5 4.4 25 478-502 25-51 (76)
155 2eyx_A V-CRK sarcoma virus CT1 58.4 11 0.00037 29.9 4.3 24 478-501 23-48 (67)
156 2nwm_A Vinexin; cell adhesion; 58.2 11 0.00038 29.9 4.3 24 478-501 16-41 (65)
157 2ct3_A Vinexin; SH3 domian, st 58.1 9.9 0.00034 30.1 4.0 25 478-502 22-48 (70)
158 2v1q_A SLA1, cytoskeleton asse 57.9 14 0.00049 28.1 4.8 25 478-502 17-44 (60)
159 1uff_A Intersectin 2; beta bar 57.4 12 0.00041 31.6 4.6 23 478-500 20-46 (93)
160 1spk_A RSGI RUH-010, riken cDN 57.3 12 0.0004 29.9 4.3 25 478-502 23-50 (72)
161 1x2p_A Protein arginine N-meth 57.0 14 0.00049 29.1 4.8 24 478-501 22-47 (68)
162 2o9s_A Ponsin; SH3 domain, sig 56.9 13 0.00044 29.3 4.5 26 478-503 21-48 (67)
163 2a28_A BZZ1 protein; SH3 domai 56.7 16 0.00054 27.5 4.8 24 478-501 15-41 (54)
164 1x69_A Cortactin isoform A; SH 56.7 15 0.00052 29.9 5.0 24 478-501 32-57 (79)
165 2da9_A SH3-domain kinase bindi 56.7 12 0.0004 29.7 4.2 24 478-501 22-49 (70)
166 2fpf_A C-JUN-amino-terminal ki 56.6 13 0.00044 29.7 4.5 24 478-501 21-46 (71)
167 1wyx_A CRK-associated substrat 56.6 14 0.00049 29.2 4.7 24 478-501 18-46 (69)
168 1csk_A C-SRC SH3 domain; phosp 56.4 13 0.00045 29.6 4.5 23 478-500 26-51 (71)
169 2dl7_A KIAA0769 protein; SH3 d 56.4 12 0.00041 30.0 4.3 24 478-501 23-51 (73)
170 2fei_A CD2-associated protein; 56.4 11 0.00038 30.0 4.0 23 478-500 16-40 (65)
171 4glm_A Dynamin-binding protein 56.4 15 0.00051 29.0 4.8 24 478-501 28-53 (72)
172 1g2b_A Spectrin alpha chain; c 56.2 15 0.00051 28.6 4.7 23 479-501 37-61 (62)
173 1cka_A C-CRK N-terminal SH3 do 55.9 14 0.00049 28.0 4.5 22 479-500 17-40 (57)
174 2cuc_A SH3 domain containing r 55.8 12 0.00041 29.6 4.1 24 478-501 22-47 (70)
175 2yup_A Vinexin; sorbin and SH3 55.7 12 0.0004 31.4 4.3 25 478-502 32-58 (90)
176 2eqi_A Phospholipase C, gamma 55.4 11 0.00038 29.8 3.9 24 478-501 22-47 (69)
177 2cre_A HEF-like protein; SH3 d 55.3 14 0.00047 29.3 4.4 23 478-500 22-49 (71)
178 4f14_A Nebulette; SH3 domain, 55.2 16 0.00056 28.0 4.8 25 478-502 21-47 (64)
179 2d8j_A FYN-related kinase; SH3 54.9 14 0.00047 29.8 4.4 26 478-503 22-49 (77)
180 2e5k_A Suppressor of T-cell re 54.8 11 0.00037 31.9 3.9 24 478-501 31-60 (94)
181 1x2q_A Signal transducing adap 54.6 16 0.00056 30.4 5.0 24 478-501 32-57 (88)
182 2ecz_A Sorbin and SH3 domain-c 54.6 12 0.00039 29.7 3.9 26 478-503 22-49 (70)
183 1x2k_A OSTF1, osteoclast stimu 54.6 16 0.00056 28.8 4.7 24 478-501 22-47 (68)
184 2bzy_A CRK-like protein, CRKL 54.6 14 0.00046 29.3 4.3 24 478-501 18-43 (67)
185 2csq_A RIM-BP2, RIM binding pr 54.5 9.6 0.00033 32.6 3.6 23 479-501 41-66 (97)
186 2dl8_A SLIT-ROBO RHO GTPase-ac 54.5 14 0.00048 29.6 4.4 24 478-501 24-49 (72)
187 3c0c_A Endophilin-A2; endocyto 54.2 16 0.00055 29.3 4.7 24 478-501 28-53 (73)
188 1k1z_A VAV; SH3, proto-oncogen 54.1 15 0.0005 29.9 4.5 25 478-502 33-60 (78)
189 2dil_A Proline-serine-threonin 54.1 18 0.00063 28.5 5.0 24 478-501 23-48 (69)
190 2kxc_A Brain-specific angiogen 54.1 14 0.00047 29.1 4.2 25 478-502 22-49 (67)
191 2dmo_A Neutrophil cytosol fact 53.9 17 0.00058 28.8 4.8 23 478-500 22-46 (68)
192 1x43_A Endophilin B1, SH3 doma 53.7 17 0.00059 29.7 4.9 23 479-501 33-59 (81)
193 2j05_A RAS GTPase-activating p 53.6 17 0.00057 28.5 4.6 25 478-502 21-47 (65)
194 3h0h_A Proto-oncogene tyrosine 53.5 17 0.00058 28.9 4.7 25 478-502 30-56 (73)
195 2ebp_A SAM and SH3 domain-cont 53.3 13 0.00044 30.2 4.0 24 478-501 26-51 (73)
196 1ruw_A Myosin-3 isoform, MYO3; 53.1 16 0.00055 28.8 4.5 25 478-502 18-44 (69)
197 1b07_A Protein (proto-oncogene 53.0 16 0.00055 28.9 4.5 23 478-500 18-42 (65)
198 2dlp_A KIAA1783 protein; SH3 d 52.9 13 0.00045 30.8 4.1 24 478-501 23-50 (85)
199 2dbm_A SH3-containing GRB2-lik 52.8 15 0.00051 29.5 4.3 24 478-501 22-47 (73)
200 2ke9_A Caskin-2; SH3 domain, A 52.4 13 0.00045 31.1 4.1 25 478-502 34-60 (83)
201 2drm_A Acanthamoeba myosin IB; 52.4 20 0.00068 27.2 4.8 24 478-501 18-43 (58)
202 2yuo_A CIP85, RUN and TBC1 dom 52.3 18 0.00061 29.4 4.7 24 478-501 22-47 (78)
203 2ega_A SH3 and PX domain-conta 52.1 16 0.00053 29.0 4.3 24 477-500 22-47 (70)
204 2pqh_A Spectrin alpha chain, b 52.1 18 0.00062 29.6 4.8 24 478-501 17-42 (80)
205 2ekh_A SH3 and PX domain-conta 52.1 19 0.00066 29.5 4.9 24 478-501 23-48 (80)
206 1w1f_A Tyrosine-protein kinase 51.9 19 0.00065 27.9 4.7 25 478-502 22-47 (65)
207 2e5p_A Protein PHF1, PHD finge 51.6 31 0.0011 29.0 6.0 47 393-451 7-55 (68)
208 4e6r_A Cytoplasmic protein NCK 51.5 18 0.0006 27.3 4.3 22 478-499 16-39 (58)
209 2ed0_A ABL interactor 2; coile 51.4 18 0.00062 29.4 4.7 23 479-501 33-57 (78)
210 2rnz_A Histone acetyltransfera 51.3 30 0.001 30.6 6.3 42 478-519 22-64 (94)
211 2ysq_A RHO guanine nucleotide 51.2 21 0.00071 29.2 5.0 24 478-501 25-50 (81)
212 1yn8_A NBP2, NAP1-binding prot 51.0 17 0.00057 27.6 4.1 24 479-502 17-42 (59)
213 1i1j_A Melanoma derived growth 50.9 13 0.00043 33.1 3.8 25 478-502 37-66 (108)
214 2dnu_A RUH-061, SH3 multiple d 50.8 17 0.00059 28.8 4.3 25 478-502 23-49 (71)
215 1u5s_A Cytoplasmic protein NCK 50.6 18 0.00062 28.6 4.4 23 478-500 21-47 (71)
216 2cub_A Cytoplasmic protein NCK 50.1 18 0.00062 30.3 4.5 24 478-501 32-57 (88)
217 1gl5_A Tyrosine-protein kinase 50.0 19 0.00067 28.3 4.5 23 478-500 17-41 (67)
218 2kxd_A 11-MER peptide, SH3 dom 49.9 22 0.00075 28.5 4.8 23 478-500 14-38 (73)
219 4esr_A Jouberin; AHI-1, AHI1, 49.8 19 0.00064 28.4 4.4 24 478-501 21-46 (69)
220 2g3r_A Tumor suppressor P53-bi 49.8 31 0.001 32.0 6.2 34 484-519 7-42 (123)
221 2lqn_A CRK-like protein; SH2, 55.3 3.5 0.00012 42.3 0.0 25 479-503 255-281 (303)
222 3qwy_A Cell death abnormality 49.6 4 0.00014 41.8 0.5 94 387-501 157-289 (308)
223 2yun_A Nostrin; nitric oxide s 49.6 18 0.0006 29.5 4.3 23 478-500 22-46 (79)
224 1gcq_C VAV proto-oncogene; SH3 49.4 12 0.00042 29.5 3.3 23 479-501 26-51 (70)
225 1z9q_A Neutrophil cytosol fact 49.0 10 0.00036 31.7 2.9 23 479-501 34-58 (79)
226 1bb9_A Amphiphysin 2; transfer 48.9 18 0.00062 32.2 4.6 25 478-502 59-90 (115)
227 3ulr_B SRC substrate cortactin 48.8 26 0.0009 27.0 5.0 24 478-501 24-49 (65)
228 2l1t_A Uncharacterized protein 48.8 94 0.0032 28.2 9.2 86 391-519 8-99 (109)
229 2e5p_A Protein PHF1, PHD finge 48.7 65 0.0022 27.1 7.4 41 480-521 8-49 (68)
230 1ujy_A RHO guanine nucleotide 48.6 15 0.00053 29.6 3.8 24 478-501 25-50 (76)
231 1ssf_A Transformation related 48.5 27 0.00092 33.6 5.8 44 483-529 10-55 (156)
232 3i5r_A Phosphatidylinositol 3- 48.4 11 0.00037 31.1 2.9 25 477-501 19-60 (83)
233 3eg3_A Proto-oncogene tyrosine 47.8 26 0.00088 26.9 4.8 24 478-501 20-46 (63)
234 1x6b_A RHO guanine exchange fa 47.7 19 0.00064 29.4 4.2 25 478-502 32-57 (79)
235 2l0a_A STAM-1, signal transduc 47.7 18 0.00063 29.5 4.1 24 478-501 32-57 (72)
236 2lcc_A AT-rich interactive dom 47.4 22 0.00076 30.0 4.6 39 480-518 4-47 (76)
237 2kgt_A Tyrosine-protein kinase 47.3 19 0.00065 28.6 4.1 25 478-503 25-51 (72)
238 1nm7_A Peroxisomal membrane pr 47.2 24 0.00081 28.8 4.7 23 479-501 24-53 (69)
239 2lx7_A GAS-7, growth arrest-sp 47.1 19 0.00065 28.7 4.0 22 480-501 21-44 (60)
240 2d8h_A SH3YL1 protein; SH3 dom 47.1 15 0.0005 30.0 3.4 23 479-501 33-59 (80)
241 2enm_A Sorting nexin-9; SH3-li 46.9 26 0.00089 28.2 4.9 24 478-501 25-51 (77)
242 2dbk_A CRK-like protein; struc 46.7 19 0.00064 30.1 4.1 24 478-501 33-58 (88)
243 3ngp_A Spectrin alpha chain, b 46.5 27 0.00093 26.6 4.7 24 478-501 21-46 (62)
244 1s1n_A Nephrocystin 1; beta ba 46.4 18 0.00062 28.4 3.8 24 478-501 25-50 (68)
245 3cqt_A P59-FYN, proto-oncogene 46.2 25 0.00086 28.9 4.8 25 478-502 20-46 (79)
246 1zuu_A BZZ1 protein; SH3 domai 45.7 26 0.00089 26.5 4.4 25 478-502 16-43 (58)
247 1uhc_A KIAA1010 protein; beta 45.4 25 0.00085 28.6 4.6 23 478-500 28-56 (79)
248 1wjq_A KIAA1798 protein; MBT d 45.1 30 0.001 31.1 5.4 38 481-521 13-53 (107)
249 1wi7_A SH3-domain kinase bindi 44.8 12 0.00042 29.5 2.6 23 478-500 22-46 (68)
250 3thk_A Spectrin alpha chain, b 44.3 29 0.001 27.5 4.7 23 478-500 20-44 (73)
251 2i0n_A Class VII unconventiona 44.2 25 0.00087 28.8 4.5 24 478-501 25-51 (80)
252 1neg_A Spectrin alpha chain, b 44.1 23 0.00079 29.7 4.2 23 478-500 32-56 (83)
253 2epd_A RHO GTPase-activating p 43.8 15 0.00053 29.7 3.1 24 478-501 25-50 (76)
254 1wx6_A Cytoplasmic protein NCK 43.8 28 0.00097 29.0 4.8 23 478-500 32-58 (91)
255 2iim_A Proto-oncogene tyrosine 43.5 29 0.001 26.7 4.5 24 478-501 21-45 (62)
256 1ugv_A KIAA0621, olygophrenin- 43.3 17 0.00057 29.2 3.1 23 478-500 25-50 (72)
257 2lcs_A NAP1-binding protein 2; 43.3 27 0.00093 28.3 4.5 25 478-502 20-46 (73)
258 2ro0_A Histone acetyltransfera 43.1 47 0.0016 29.1 6.1 41 479-519 21-62 (92)
259 2kbt_A Chimera of proto-oncoge 42.7 28 0.00097 32.0 5.0 24 478-501 20-46 (142)
260 1uhf_A Intersectin 2; beta bar 42.6 21 0.00072 28.4 3.6 23 478-500 23-46 (69)
261 2e5q_A PHD finger protein 19; 42.4 82 0.0028 26.1 7.0 43 478-521 4-47 (63)
262 2egc_A SH3 and PX domain-conta 42.3 31 0.0011 27.9 4.6 25 479-503 25-51 (75)
263 2dm1_A Protein VAV-2; RHO fami 42.2 23 0.00078 28.4 3.8 24 478-501 22-49 (73)
264 1j3t_A Intersectin 2; beta bar 42.1 30 0.001 27.8 4.5 24 478-501 25-49 (74)
265 2m0o_A PHD finger protein 1; t 42.1 29 0.00098 29.9 4.4 47 393-451 24-72 (79)
266 2xdp_A Lysine-specific demethy 42.1 16 0.00055 33.8 3.2 105 394-530 5-111 (123)
267 2x3w_D Syndapin I, protein kin 41.6 28 0.00097 26.5 4.1 24 478-501 18-44 (60)
268 2e5q_A PHD finger protein 19; 41.3 66 0.0022 26.7 6.3 47 393-451 5-53 (63)
269 2yt6_A Adult MALE urinary blad 41.2 34 0.0011 29.4 5.0 24 479-502 43-68 (109)
270 4ag1_C Fynomer; hydrolase-de n 39.9 32 0.0011 28.6 4.5 25 478-502 21-47 (84)
271 1tuc_A Alpha-spectrin; capping 39.7 29 0.00099 27.1 4.0 22 479-500 5-28 (63)
272 2o2o_A SH3-domain kinase-bindi 39.6 16 0.00054 31.3 2.6 25 477-501 32-58 (92)
273 2lrq_A Protein MRG15, NUA4 com 45.8 6.2 0.00021 34.1 0.0 39 480-518 11-50 (85)
274 1wgs_A MYST histone acetyltran 39.4 36 0.0012 31.5 5.1 39 480-518 11-53 (133)
275 1aww_A ATK, AMGX1, BPK, bruton 38.7 18 0.00062 28.4 2.6 24 478-501 23-48 (67)
276 2gqi_A RAS GTPase-activating p 38.5 19 0.00066 28.7 2.8 25 477-501 22-48 (71)
277 2lcd_A AT-rich interactive dom 44.2 6.8 0.00023 36.0 0.0 49 482-532 7-55 (118)
278 1mv3_A MYC box dependent inter 37.9 30 0.001 34.5 4.6 24 479-502 158-188 (213)
279 1i07_A Epidermal growth factor 37.8 32 0.0011 26.3 3.9 22 479-500 17-39 (60)
280 2jw4_A Cytoplasmic protein NCK 37.6 41 0.0014 26.8 4.7 24 478-501 22-46 (72)
281 3o5z_A Phosphatidylinositol 3- 37.0 22 0.00077 29.9 3.1 25 477-501 25-66 (90)
282 1x6g_A Megakaryocyte-associate 36.5 43 0.0015 27.5 4.7 23 479-501 33-58 (81)
283 2dl5_A KIAA0769 protein; SH3 d 36.2 33 0.0011 27.8 3.9 24 479-502 29-55 (78)
284 3mea_A SAGA-associated factor 35.9 97 0.0033 30.3 7.7 51 393-446 114-167 (180)
285 3reb_B Tyrosine-protein kinase 35.4 41 0.0014 27.9 4.5 32 469-500 9-41 (90)
286 1gbq_A GRB2; complex (signal t 35.0 36 0.0012 27.3 3.9 24 478-501 24-50 (74)
287 2ct4_A CDC42-interacting prote 34.7 51 0.0018 25.9 4.7 24 478-501 22-48 (70)
288 3m9q_A Protein MALE-specific l 34.5 63 0.0022 28.9 5.7 39 480-518 18-67 (101)
289 2rqr_A CED-12 homolog, engulfm 34.1 39 0.0013 30.1 4.4 33 469-501 65-98 (119)
290 2oi3_A Tyrosine-protein kinase 33.7 54 0.0019 26.8 4.9 24 479-502 41-65 (86)
291 2vkn_A Protein SSU81; membrane 33.6 32 0.0011 27.2 3.3 20 481-500 25-45 (70)
292 2k2m_A EPS8-like protein 1; al 32.8 54 0.0018 25.9 4.6 32 469-500 14-46 (68)
293 1hsq_A Phospholipase C-gamma ( 31.9 16 0.00056 29.0 1.4 25 477-501 20-46 (71)
294 2jmc_A Spectrin alpha chain, b 31.8 24 0.00082 28.7 2.3 22 479-500 7-30 (77)
295 2eko_A Histone acetyltransfera 31.5 58 0.002 28.3 4.8 42 479-520 7-54 (87)
296 2jxb_A T-cell surface glycopro 30.9 51 0.0017 27.3 4.3 22 479-500 47-69 (86)
297 2m0y_A Dedicator of cytokinesi 30.9 28 0.00097 27.6 2.6 26 478-503 26-52 (74)
298 2v1r_A Peroxisomal membrane pr 30.8 35 0.0012 27.6 3.2 23 479-501 31-60 (80)
299 3qwx_X Cell death abnormality 30.3 48 0.0016 30.8 4.5 23 479-501 134-158 (174)
300 2iim_A Proto-oncogene tyrosine 29.8 58 0.002 25.0 4.2 24 393-420 22-45 (62)
301 1jqq_A PEX13P, peroxisomal mem 29.8 36 0.0012 28.4 3.2 23 479-501 31-60 (92)
302 3jv3_A Intersectin-1; SH3 doma 29.4 51 0.0017 32.4 4.7 24 478-501 17-42 (283)
303 2b86_A Cytoplasmic protein NCK 29.3 47 0.0016 26.6 3.7 27 474-500 15-42 (67)
304 3m9p_A MALE-specific lethal 3 29.2 83 0.0028 28.6 5.6 39 480-518 18-67 (110)
305 2pd0_A Hypothetical protein; s 28.9 11 0.00038 37.9 -0.2 29 271-303 26-54 (223)
306 2kym_A BUD emergence protein 1 28.7 69 0.0024 28.5 5.0 25 478-502 18-44 (120)
307 1wxb_A Epidermal growth factor 28.6 68 0.0023 25.2 4.5 32 469-500 13-45 (68)
308 1w1f_A Tyrosine-protein kinase 28.5 57 0.0019 25.2 4.0 24 393-420 23-46 (65)
309 1gri_A Growth factor bound pro 28.4 52 0.0018 31.3 4.4 23 479-501 174-198 (217)
310 2yuq_A Tyrosine-protein kinase 27.6 59 0.002 26.8 4.1 23 479-501 35-59 (85)
311 1cka_A C-CRK N-terminal SH3 do 27.6 61 0.0021 24.4 3.9 24 393-419 17-40 (57)
312 3mp6_A MBP, SGF29, maltose-bin 27.5 1.1E+02 0.0038 32.9 7.4 40 392-434 454-494 (522)
313 1wxt_A Hypothetical protein FL 27.4 75 0.0026 24.9 4.6 32 469-500 13-45 (68)
314 1ng2_A Neutrophil cytosolic fa 27.1 53 0.0018 31.2 4.3 24 478-501 26-51 (193)
315 2oaw_A Spectrin alpha chain, b 26.8 74 0.0025 24.3 4.3 27 393-422 17-43 (65)
316 1b07_A Protein (proto-oncogene 26.7 62 0.0021 25.5 3.9 24 393-419 19-42 (65)
317 2cud_A SRC-like-adapter; SH3 d 26.3 79 0.0027 25.7 4.6 24 479-502 33-57 (79)
318 1udl_A Intersectin 2, KIAA1256 26.1 50 0.0017 27.9 3.5 23 478-500 49-73 (98)
319 2jte_A CD2-associated protein; 25.9 73 0.0025 24.5 4.2 26 393-419 22-47 (64)
320 2dl7_A KIAA0769 protein; SH3 d 25.8 63 0.0021 25.7 3.8 27 393-419 24-50 (73)
321 1j3t_A Intersectin 2; beta bar 25.3 72 0.0025 25.5 4.1 23 393-419 26-48 (74)
322 1jo8_A ABP1P, actin binding pr 25.1 77 0.0026 23.9 4.1 26 393-421 16-41 (58)
323 2pz1_A RHO guanine nucleotide 24.9 64 0.0022 34.4 4.8 24 478-501 45-70 (466)
324 2bz8_A SH3-domain kinase bindi 24.8 72 0.0025 24.1 3.9 25 393-420 17-41 (58)
325 1zuu_A BZZ1 protein; SH3 domai 24.7 71 0.0024 24.0 3.8 26 393-420 17-42 (58)
326 2g6f_X RHO guanine nucleotide 24.2 78 0.0027 24.0 4.0 25 393-420 20-44 (59)
327 2ydl_A SH3 domain-containing k 24.2 89 0.0031 24.9 4.5 26 393-419 18-43 (69)
328 1y0m_A 1-phosphatidylinositol- 24.0 89 0.0031 23.8 4.3 25 393-420 19-43 (61)
329 1ue9_A Intersectin 2; beta bar 24.0 77 0.0026 25.6 4.1 26 393-421 23-48 (80)
330 1uj0_A Signal transducing adap 23.7 84 0.0029 24.1 4.1 25 393-420 21-45 (62)
331 2do3_A Transcription elongatio 23.7 2.2E+02 0.0076 23.9 6.8 52 479-533 15-67 (69)
332 1wyx_A CRK-associated substrat 23.5 72 0.0025 25.0 3.7 27 393-419 19-45 (69)
333 3eg3_A Proto-oncogene tyrosine 23.4 89 0.003 23.7 4.2 26 393-420 21-46 (63)
334 2fpe_A C-JUN-amino-terminal ki 23.2 75 0.0026 24.3 3.7 25 393-420 19-43 (62)
335 1uti_A GRB2-related adaptor pr 23.2 89 0.0031 23.5 4.1 25 393-420 17-41 (58)
336 2a28_A BZZ1 protein; SH3 domai 22.7 1.2E+02 0.0041 22.5 4.7 26 393-420 16-41 (54)
337 2m0y_A Dedicator of cytokinesi 22.5 56 0.0019 25.8 2.9 26 393-422 27-52 (74)
338 1zuy_A Myosin-5 isoform; SH3 d 22.4 90 0.0031 23.3 4.0 26 393-421 17-42 (58)
339 1oot_A Hypothetical 40.4 kDa p 22.2 1.1E+02 0.0037 23.2 4.5 27 393-420 19-45 (60)
340 1g2b_A Spectrin alpha chain; c 22.2 89 0.003 24.0 4.0 25 393-420 37-61 (62)
341 2vwf_A Growth factor receptor- 22.2 96 0.0033 23.2 4.1 25 393-420 18-42 (58)
342 1sem_A SEM-5; SRC-homology 3 ( 22.0 99 0.0034 23.2 4.1 25 393-420 18-42 (58)
343 1wxu_A Peroxisomal biogenesis 21.9 59 0.002 27.2 3.1 23 478-500 32-60 (93)
344 1zx6_A YPR154WP; SH3 domain, p 21.6 98 0.0033 23.3 4.0 25 393-420 18-42 (58)
345 2v1q_A SLA1, cytoskeleton asse 21.2 1.2E+02 0.004 22.8 4.4 26 393-420 18-43 (60)
346 2de0_X Alpha-(1,6)-fucosyltran 21.1 62 0.0021 36.2 3.9 26 477-502 456-483 (526)
347 2oi3_A Tyrosine-protein kinase 21.0 89 0.0031 25.5 4.0 25 393-421 41-65 (86)
348 2dyb_A Neutrophil cytosol fact 20.9 88 0.003 32.4 4.8 23 479-501 190-214 (341)
349 3c0c_A Endophilin-A2; endocyto 20.9 97 0.0033 24.6 4.1 25 393-420 29-53 (73)
350 3cqt_A P59-FYN, proto-oncogene 20.9 97 0.0033 25.3 4.1 26 393-421 21-46 (79)
351 2djq_A SH3 domain containing r 20.8 1E+02 0.0036 23.9 4.2 24 393-419 23-46 (68)
352 1b8k_A NT3, protein (neurotrop 20.6 51 0.0017 30.4 2.5 31 154-189 67-98 (119)
353 2cud_A SRC-like-adapter; SH3 d 20.6 87 0.003 25.5 3.8 25 393-421 33-57 (79)
354 1x6g_A Megakaryocyte-associate 20.6 94 0.0032 25.4 4.0 25 393-419 33-57 (81)
355 1w70_A Neutrophil cytosol fact 20.4 1E+02 0.0035 23.5 3.9 25 393-420 20-44 (60)
356 2k9g_A SH3 domain-containing k 20.4 1.2E+02 0.004 24.0 4.5 26 393-419 25-50 (73)
357 2fpf_A C-JUN-amino-terminal ki 20.4 90 0.0031 24.6 3.7 25 393-420 22-46 (71)
358 2lj0_A Sorbin and SH3 domain-c 20.3 1E+02 0.0034 24.7 4.0 25 393-420 22-46 (65)
359 2k3y_A Chromatin modification- 20.2 1.5E+02 0.005 27.9 5.6 27 480-506 8-34 (136)
360 2ew3_A SH3-containing GRB2-lik 20.1 1.1E+02 0.0038 24.2 4.3 25 393-420 19-43 (68)
361 1vq8_Q 50S ribosomal protein L 20.1 1.6E+02 0.0056 26.1 5.6 53 480-533 32-95 (96)
362 3h0h_A Proto-oncogene tyrosine 20.1 1.1E+02 0.0037 24.1 4.1 26 393-421 31-56 (73)
No 1
>1w4s_A Polybromo, polybromo 1 protein; BAH, bromo-associated homology domain, chromatin remodelling, PBAF, SWI/SNF-B, RSC, nuclear protein; 1.55A {Gallus gallus}
Probab=99.85 E-value=6.7e-23 Score=197.37 Aligned_cols=131 Identities=18% Similarity=0.257 Sum_probs=92.9
Q ss_pred EEeccccccccccccccccccCCeEEEEeeEEEEEecC--CceeEeeehhhhcccCCCeeEEEEeeeccceeeeeecCCC
Q 044464 146 VWSGVAWTCGKQLKHFPAFCRNGTTISIQSFVFVMAKG--ENHYVAYLEDMYEDKRGQKKVKVRWFHHNQEVKGVVSLRN 223 (686)
Q Consensus 146 ~W~G~~W~C~Kr~kHY~sF~RnG~tIsVh~FVyv~aee--~~~~vAYlEDmYED~kg~k~V~VRWFh~~~Ev~~~lp~~~ 223 (686)
||.|.+|.|+|+++||++|.++|.+|.|+|||||.+++ ++.|||.||+||||..|++||+|+||-+..|+... +.+.
T Consensus 2 ~~~g~~~~~~~~r~~y~~~~~~g~~~~vGD~V~v~~~~~~~~p~I~rI~~i~~~~~g~~~v~v~WfyRPeet~~~-~~~~ 80 (174)
T 1w4s_A 2 MSSGSAGLSSLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHL-ATRK 80 (174)
T ss_dssp ------------------------CCCTTCEEEECCSSTTSCCEEEEEEEEEECTTCCEEEEEEEEECGGGSCCC-TTCE
T ss_pred CccCCccccCCCcEEeEEEEECCEEEECCCEEEEeCCCCCCCCEEEEEEEEEEcCCCCEEEEEEEecCHHHcccc-cCCc
Confidence 79999999999999999999999999999999999987 56899999999999999999999999999997653 3356
Q ss_pred CCCceEEEcCCceeeeeeeeeccccccChHHHHHHHhhccccc-eeeEEEEEeeccCC
Q 044464 224 PHPKEVFITPHSQVISAECVDGSASVLTREHFSKCLAAFPNAL-LARVHLCTRQFRSN 280 (686)
Q Consensus 224 ~~~rEvf~s~~~Q~isvECiDG~AtVLtp~H~ek~~~~~~~~~-~~~~~~C~rq~~n~ 280 (686)
++++|||+|.+..+++++||.|.++||+.+.|.++. |... ....|+|.+.|+..
T Consensus 81 ~~~~EvF~S~~~d~~~~~~I~gkC~V~~~~~~~~~~---p~~~~~~dvF~c~~~Yd~~ 135 (174)
T 1w4s_A 81 FLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLC---PENFRDEDVYVCESRYSAK 135 (174)
T ss_dssp EETTEEEEEEEEEEEEGGGEEEEEEEEEHHHHTTEE---ETTCCGGGEEEEEEEEETT
T ss_pred CCCCeeEEeCCcceecHHHeeeeEEEEECchhhhcC---cCCCCCCCEEEEeEEEccc
Confidence 789999999999999999999999999999998752 2211 23569999999865
No 2
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=99.60 E-value=3.9e-16 Score=187.96 Aligned_cols=148 Identities=16% Similarity=0.296 Sum_probs=120.6
Q ss_pred cCCCCceEEeccccccccccccccccccCCeEEEEeeEEEEEecCCc--eeEeeehhhhcccCCCeeEEEEeeeccceee
Q 044464 139 NGQSSDIVWSGVAWTCGKQLKHFPAFCRNGTTISIQSFVFVMAKGEN--HYVAYLEDMYEDKRGQKKVKVRWFHHNQEVK 216 (686)
Q Consensus 139 ~~~s~~f~W~G~~W~C~Kr~kHY~sF~RnG~tIsVh~FVyv~aee~~--~~vAYlEDmYED~kg~k~V~VRWFh~~~Ev~ 216 (686)
...+++|.|+|.+|.+..++.||+++..+|.+|.|.|||||.+++.+ .|||.||.|||+..|++||+||||.+..|.
T Consensus 438 ~~~~~~i~W~G~p~k~~~~~~~Y~~~~v~g~~~~vGD~V~v~~~d~~~p~yiarIe~iwe~~dg~~~~~~~WfyRp~ET- 516 (1330)
T 3av4_A 438 KQNKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQMMFHAHWFCAGTDT- 516 (1330)
T ss_dssp CCCCSCEEEESSCSCCC--CEEECSEEEESSEEETTCEEEECBCCSSCCCEEEEEEEEEEETTCCEEEEEEEEEEGGGS-
T ss_pred hcccCCceEccCceeccCCceeeeEEEECCEEEecCCEEEEeCCCCCCCCEEEEEeeeeecCCCCEEEEEEEEEchHHc-
Confidence 35688999999999999999999999999999999999999988733 699999999999999999999999999995
Q ss_pred eeecCCCCCCceEEEcCCceeeeeeeeeccccccC---hHHHHHHHhh-----ccccceeeEEEEEeeccCCCccceeec
Q 044464 217 GVVSLRNPHPKEVFITPHSQVISAECVDGSASVLT---REHFSKCLAA-----FPNALLARVHLCTRQFRSNRLKPFDLS 288 (686)
Q Consensus 217 ~~lp~~~~~~rEvf~s~~~Q~isvECiDG~AtVLt---p~H~ek~~~~-----~~~~~~~~~~~C~rq~~n~~vKpFdit 288 (686)
++. ..+++||||+|.+..+++++||-|.++|+. +++|.+--+. .+.+.....|+|...|+...-+-|+|.
T Consensus 517 -vlg-~~~~~rElFlS~~~d~~~l~~I~gKC~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~C~~~Yd~~~~~F~~lp 594 (1330)
T 3av4_A 517 -VLG-ATSDPLELFLVGECENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFESPP 594 (1330)
T ss_dssp -TTG-GGSCTTEEEEEEEEEEEEGGGEEEEECEEECCCCTTSTTCCC-------------CCEEEEEEEETTTTEEECCC
T ss_pred -ccc-cccCCCeEEEecccccCcHHHhcceeEEEEeccchhhhhhcccCccccccccccCCceEEEeEECCccCccCCcC
Confidence 233 458999999999999999999999999996 5555321000 011122335999999999988888887
Q ss_pred c
Q 044464 289 K 289 (686)
Q Consensus 289 q 289 (686)
+
T Consensus 595 ~ 595 (1330)
T 3av4_A 595 K 595 (1330)
T ss_dssp C
T ss_pred c
Confidence 7
No 3
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=99.59 E-value=5.5e-16 Score=182.66 Aligned_cols=146 Identities=13% Similarity=0.237 Sum_probs=118.9
Q ss_pred cCCCCceEEeccccccccccccccccccCCeEEEEeeEEEEEecCCce--eEeeehhhhcccCCCeeEEEEeeeccceee
Q 044464 139 NGQSSDIVWSGVAWTCGKQLKHFPAFCRNGTTISIQSFVFVMAKGENH--YVAYLEDMYEDKRGQKKVKVRWFHHNQEVK 216 (686)
Q Consensus 139 ~~~s~~f~W~G~~W~C~Kr~kHY~sF~RnG~tIsVh~FVyv~aee~~~--~vAYlEDmYED~kg~k~V~VRWFh~~~Ev~ 216 (686)
....++|.|.|.++.+..+.++|+++..+|.+|+|.|||||.+++.+. |||+||.||||..|.|||.||||.+..|-
T Consensus 127 ~~~~~~~~W~G~p~k~~~~~~~Y~s~~v~g~~i~VGD~V~v~~~d~~~ppyIarIe~m~ed~~g~k~~~v~Wf~rp~ET- 205 (1002)
T 3swr_A 127 KQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT- 205 (1002)
T ss_dssp CCCCSCEEEESCCCCCBTTEEECSEEEETTEEEETTCEEEECBSSTTSCCEEEEEEEEEEETTTEEEEEEEEEEEGGGS-
T ss_pred ccccccccccCcccccccCceeeeEEEECCEEEecCCEEEEecCCCCCCceEEEEEEEeecCCCCeEEEEEEEecchhc-
Confidence 357789999999998888899999999999999999999999987553 89999999999999999999999999993
Q ss_pred eeecCCCCCCceEEEcCCceeeeeeeeeccccccC--h----HHHHHHHhhccc-cceeeEEEEEeeccCCCccceee
Q 044464 217 GVVSLRNPHPKEVFITPHSQVISAECVDGSASVLT--R----EHFSKCLAAFPN-ALLARVHLCTRQFRSNRLKPFDL 287 (686)
Q Consensus 217 ~~lp~~~~~~rEvf~s~~~Q~isvECiDG~AtVLt--p----~H~ek~~~~~~~-~~~~~~~~C~rq~~n~~vKpFdi 287 (686)
++. ..+++||||+|.+-.+++++||.|.++|+. | .|+.......+. ......|+|...|+...-.-|+|
T Consensus 206 -~lg-~~~~~~ElFlsd~cd~~~l~~I~gkc~V~~~~~~~~w~~~~~~~~~~~~~~~~~~~ffc~~~Y~~~~~~F~~l 281 (1002)
T 3swr_A 206 -VLG-ATSDPLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMDPESLLEGDDGKTYFYQLWYDQDYARFESP 281 (1002)
T ss_dssp -TTG-GGSCTTEEEEEEEEEEEEGGGEEEEECEEECCCCTTGGGCTTCCCCCSCCCCCCTSEEEEEEEETTTTEEECC
T ss_pred -ccc-cCCCCCceEeeccccCCcHHHhceeeEEEEccCCcchhhhcccccccccccCCCCeEEEEEEECCCCCcccCC
Confidence 344 458999999999999999999999999995 2 111111111111 11134699999999998777777
No 4
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=99.48 E-value=3e-13 Score=125.75 Aligned_cols=106 Identities=19% Similarity=0.312 Sum_probs=83.2
Q ss_pred CCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCCCCCC
Q 044464 397 KVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPTPPDN 476 (686)
Q Consensus 397 kvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~PP~~ 476 (686)
-.+..|||+... |+||.|+|.++..+.+.|.|.+.. . .+++|+.+ .|||.||+.
T Consensus 3 ~~~~~VEV~~~~----G~~y~a~V~~v~~d~~~V~f~n~w-----~-~~~~vp~~----------------~vRlpP~~~ 56 (128)
T 3h8z_A 3 FQGLPVEVRGSN----GAFYKGFVKDVHEDSVTIFFENNW-----Q-SERQIPFG----------------DVRLPPPAD 56 (128)
T ss_dssp TTTCEEEEECTT----SCEEEEEEEEECSSEEEEEETTCT-----T-CCEEEEGG----------------GEECCCCC-
T ss_pred ccccEEEEecCC----CCEEEEEEEEEeCCcEEEEEcccc-----C-cceEechh----------------hEEcCCCcc
Confidence 368899999853 899999999999999999997642 2 26899986 799998874
Q ss_pred CCCCCcCCCCEEEEeeCC------CeeEEEEEEEecCCCCeEEEEECC---cceEEEeecCCCcce
Q 044464 477 REDLSLGIGTAVDAWWSD------GWWEGVVIGVDSSSTDNLQVYLSG---ESLFLNVNKNDLRIS 533 (686)
Q Consensus 477 ~~~~~~~vGD~VDAw~~D------GWWeGVV~kv~~~g~~ky~VyFpG---e~del~f~~sdLRps 533 (686)
. ...|.+||.||||+.. |||.|+|+++. ++.|.|++.| +-.+ .+....|||.
T Consensus 57 ~-~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~k---g~f~~V~y~~~~~~~~E-iV~~~rlR~~ 117 (128)
T 3h8z_A 57 Y-NKEITEGDEVEVYSRANEQEPCGWWLARVRMMK---GDFYVIEYAACDATYNE-IVTLERLRPV 117 (128)
T ss_dssp ----CCCTTCEEEEEECC---CCCEEEEEEEEEEE---TTEEEEEETTC----CE-EECGGGEEEC
T ss_pred c-ccCCCCCCEEEEEecCCCCCcCccEEEEEEEee---CCEEEEEEcCCCCCcce-EEehhheEeC
Confidence 3 4789999999999974 99999999985 6899999887 2233 3457777775
No 5
>4dov_A ORC1, origin recognition complex subunit 1; DNA replication, replication; 1.70A {Mus musculus} PDB: 4dow_A*
Probab=99.25 E-value=5.5e-12 Score=121.29 Aligned_cols=140 Identities=21% Similarity=0.365 Sum_probs=110.7
Q ss_pred CceEEeccccccccc-ccccccccc--CC---eEEEEeeEEEEEecC-CceeEeeehhhhcc---cCCCeeEEEEeeecc
Q 044464 143 SDIVWSGVAWTCGKQ-LKHFPAFCR--NG---TTISIQSFVFVMAKG-ENHYVAYLEDMYED---KRGQKKVKVRWFHHN 212 (686)
Q Consensus 143 ~~f~W~G~~W~C~Kr-~kHY~sF~R--nG---~tIsVh~FVyv~aee-~~~~vAYlEDmYED---~kg~k~V~VRWFh~~ 212 (686)
..++|.|-+=.=+|- -.+|++++= +| ++|.|.|||+|-.+. ++-|||=|+.|||| .+.+|.+.|+||.+.
T Consensus 5 ~~ysW~g~~l~drkl~~~~Y~~~~v~~~~~~~~~i~vGd~VLI~~~D~~~PyVAki~~lye~~~e~~~~k~A~VQWy~R~ 84 (163)
T 4dov_A 5 QTFSWVGRPLPNRKQFQQMYREICMKINDGSEIHIKVGQFVLIQGEDNKKPYVAKLIELFQNGAEVPPKKCARVQWFVRF 84 (163)
T ss_dssp CEEEEESCCCCCCCTTEEEESEEEEECTTSCEEEEETTCEEEECCSSSSCCEEEEEEEEEEETTSSSCEEEEEEEEEEEG
T ss_pred EEEEEeccCcCCCcccceeeeEEEEecCCCCCeEEeeCCEEEEeCCcccCChhHHHHHHHhccccCCCceEEEEEeeech
Confidence 368999888533332 457999887 67 999999999998775 78899999999996 668999999999999
Q ss_pred ceeeeee---cCCCCCCceEEEcCCc---eeeeeeeeeccccccChHHHHHHHhhcccc-ceeeEEEEEeeccCCCccce
Q 044464 213 QEVKGVV---SLRNPHPKEVFITPHS---QVISAECVDGSASVLTREHFSKCLAAFPNA-LLARVHLCTRQFRSNRLKPF 285 (686)
Q Consensus 213 ~Ev~~~l---p~~~~~~rEvf~s~~~---Q~isvECiDG~AtVLtp~H~ek~~~~~~~~-~~~~~~~C~rq~~n~~vKpF 285 (686)
.|+-..- -...|++.|||++.+. -+|+||+|-|+++|++=.-+|. +|.. -....++=.--|+..++||.
T Consensus 85 ~EiP~~k~~l~g~~~~~qEIF~~d~~~~d~~I~aeTIi~~c~V~~~~~~e~----~p~~~~~e~t~FvklsWd~k~f~pl 160 (163)
T 4dov_A 85 LEIPVSKRHLLGRSPPAQEIFWYDCSDWDNKINVETIIGPVQVVALAPEEV----IPVDQKSEETLFVKLSWNKKDFAPL 160 (163)
T ss_dssp GGSCTTTGGGGCSCCCTTEEEEECCSCSCCEEEGGGEEEEEEEEECCTTCC----CCSSCCCCSEEEEEEEECSSCEEEC
T ss_pred hhccccchhhccCCCCCCeEEEecCCCCcccccHHHeeeceEEEEcCCccc----cCCCcccceEEEEEEEecCCcceeC
Confidence 9983332 2233778999997776 4899999999999998777777 4444 34557777777888888885
Q ss_pred e
Q 044464 286 D 286 (686)
Q Consensus 286 d 286 (686)
.
T Consensus 161 ~ 161 (163)
T 4dov_A 161 P 161 (163)
T ss_dssp C
T ss_pred C
Confidence 4
No 6
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=98.82 E-value=1.3e-09 Score=124.65 Aligned_cols=96 Identities=14% Similarity=0.300 Sum_probs=82.3
Q ss_pred ccccccccccCCeEEEEeeEEEEEecCC-ceeEeeehhhhcccCCCeeEEEEeeeccceeee-eecCCC-----CCCceE
Q 044464 157 QLKHFPAFCRNGTTISIQSFVFVMAKGE-NHYVAYLEDMYEDKRGQKKVKVRWFHHNQEVKG-VVSLRN-----PHPKEV 229 (686)
Q Consensus 157 r~kHY~sF~RnG~tIsVh~FVyv~aee~-~~~vAYlEDmYED~kg~k~V~VRWFh~~~Ev~~-~lp~~~-----~~~rEv 229 (686)
-+.||++..-.|+++.|||||||.+++. -.||++|..|||..+|..++.||||.+.++.-+ .++.+. ..+|||
T Consensus 44 ~~~~~~~~~~~~~~~~~~d~~~v~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~d~~~~ 123 (784)
T 4ft4_B 44 ARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRV 123 (784)
T ss_dssp EEEECSEEEETTEEEETTCEEEECCSTTSCCEEEEEEEEEEETTSCEEEEEEEEEEGGGSTTGGGGGCCBTTBCCCTTBE
T ss_pred cceeeeeeeECCEEEeCCCeEEEeCCCCCCCEEEEEEEEEEcCCCCEEEEEEEeeChhhhcccccccccccccccccceE
Confidence 3679999999999999999999999775 479999999999999999999999999987532 222122 247999
Q ss_pred EEcCCceeeeeeeeeccccccCh
Q 044464 230 FITPHSQVISAECVDGSASVLTR 252 (686)
Q Consensus 230 f~s~~~Q~isvECiDG~AtVLtp 252 (686)
|+|...-+++++||.|.++|+-.
T Consensus 124 ~~s~~~~~~~~~~i~~k~~v~~~ 146 (784)
T 4ft4_B 124 FLSEEKNDNVLDCIISKVKIVHV 146 (784)
T ss_dssp EEEEEEEEEEGGGEEEECCEEEC
T ss_pred EEeCcEEEechHHeeeeEEEEee
Confidence 99999999999999999999743
No 7
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=98.36 E-value=1.8e-07 Score=110.97 Aligned_cols=121 Identities=12% Similarity=0.224 Sum_probs=95.0
Q ss_pred cccccccccCCeEEEEeeEEEEEecCC-------------------------------------------ceeEeeehhh
Q 044464 158 LKHFPAFCRNGTTISIQSFVFVMAKGE-------------------------------------------NHYVAYLEDM 194 (686)
Q Consensus 158 ~kHY~sF~RnG~tIsVh~FVyv~aee~-------------------------------------------~~~vAYlEDm 194 (686)
...|.+|+-+|++..|+|||||..+.- --+|+||+++
T Consensus 322 ~~~~~~~~~~g~~y~vgD~Vyl~p~~~~f~~~~~~~~~~~~~~~vd~~~ype~yrk~~~~~kg~n~~~~~P~~IgrI~~i 401 (1002)
T 3swr_A 322 RVLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEI 401 (1002)
T ss_dssp CEEESEEEETTEEEETTCEEEECTTSCCCSSCCCCCCCCSCSCCCCTTTCTTSGGGHHHHHTCCCCCCCCCCEEEEEEEE
T ss_pred cEEEEEEEECCEEEecCCEEEECCcccccccccccccccccccccccccchhhhhccchhccccccCCCCCceeeEEeEE
Confidence 358999999999999999999998331 1369999999
Q ss_pred hcccCCC-------eeEEEEeeeccceeeeeecC-CCCCCceEEEcCCceeeeeeeeeccccccChHHHHHHHhhccccc
Q 044464 195 YEDKRGQ-------KKVKVRWFHHNQEVKGVVSL-RNPHPKEVFITPHSQVISAECVDGSASVLTREHFSKCLAAFPNAL 266 (686)
Q Consensus 195 YED~kg~-------k~V~VRWFh~~~Ev~~~lp~-~~~~~rEvf~s~~~Q~isvECiDG~AtVLtp~H~ek~~~~~~~~~ 266 (686)
|-++.++ -+|+||||-+..++...... .....||||.|...-.+++++|-|-.+|+.-+.|.++........
T Consensus 402 ~~~~~~~~~~~~~~~~v~v~~fyRPed~~~~~~~~~~~D~~elf~S~~~~~~~~~~i~GkC~V~~~~d~~~~~~~~~~~~ 481 (1002)
T 3swr_A 402 FCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGG 481 (1002)
T ss_dssp EECCCSSSSCCSSCCEEEEEECBCGGGSTTCGGGGSSSCTTEEEECCCEEEEEGGGCCEEEEEEEGGGCSSCHHHHHHTS
T ss_pred EecCCccccCCCccEEEEEEEEECcccccccccccccCCcceEEEecceeccCHHHcceEEEEEEeccccccchhhccCC
Confidence 9988887 79999999999988432221 222459999999999999999999999999888877655322222
Q ss_pred eeeEEEEEeeccC
Q 044464 267 LARVHLCTRQFRS 279 (686)
Q Consensus 267 ~~~~~~C~rq~~n 279 (686)
.-++|+| ..|+.
T Consensus 482 p~~fyf~-~~Yd~ 493 (1002)
T 3swr_A 482 PNRFYFL-EAYNA 493 (1002)
T ss_dssp SSEEEEE-EEEET
T ss_pred CCeEEEE-EEEeC
Confidence 3578888 55653
No 8
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=98.33 E-value=1.2e-06 Score=81.54 Aligned_cols=63 Identities=14% Similarity=0.354 Sum_probs=49.1
Q ss_pred ccCCCCCCEEEEEecCCcceee-EEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGC-WFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRP 471 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGs-WF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP 471 (686)
...|.+|++|||.+.......| |++|+|+++.++.|.|+|..+- ....|||... +|||
T Consensus 58 ~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg~f~~V~y~~~~-----~~~~EiV~~~----------------rlR~ 116 (128)
T 3h8z_A 58 NKEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACD-----ATYNEIVTLE----------------RLRP 116 (128)
T ss_dssp --CCCTTCEEEEEECC---CCCEEEEEEEEEEETTEEEEEETTC---------CEEECGG----------------GEEE
T ss_pred ccCCCCCCEEEEEecCCCCCcCccEEEEEEEeeCCEEEEEEcCCC-----CCcceEEehh----------------heEe
Confidence 4679999999999988777777 9999999999999999999984 2568999964 7999
Q ss_pred CCCCC
Q 044464 472 TPPDN 476 (686)
Q Consensus 472 ~PP~~ 476 (686)
+||..
T Consensus 117 ~n~~~ 121 (128)
T 3h8z_A 117 VNPNP 121 (128)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 98853
No 9
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=98.05 E-value=8.5e-07 Score=107.76 Aligned_cols=122 Identities=11% Similarity=0.136 Sum_probs=92.4
Q ss_pred cccccccccCCeEEEEeeEEEEEecC-------------------------------------------CceeEeeehhh
Q 044464 158 LKHFPAFCRNGTTISIQSFVFVMAKG-------------------------------------------ENHYVAYLEDM 194 (686)
Q Consensus 158 ~kHY~sF~RnG~tIsVh~FVyv~aee-------------------------------------------~~~~vAYlEDm 194 (686)
..+|.+|.-||++..|+|||||-.+. +-.+||+|.++
T Consensus 634 ~~~Y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~~~~~ype~yrk~~~~~kg~~~~~~~Py~IgqI~eI 713 (1330)
T 3av4_A 634 RVYCSSITKNGVVYRLGDSVYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEI 713 (1330)
T ss_dssp SEEEEEEEETTEEEETTCEEEECTTSCCCCCCC-------CCCCCCTTTCSSGGGGGC-------CCCCCCCEEEEEEEC
T ss_pred ceeeeEEEECCEEEecCCEEEECcccccccccccccccccccccccccccchhhhcccccccccccCCCCCceEEEEEEE
Confidence 45799999999999999999997651 11379999999
Q ss_pred hcccC------CCeeEEEEeeeccceeeeeecCC-CCCCceEEEcCCceeeeeeeeeccccccChHHHHHHHhhccccce
Q 044464 195 YEDKR------GQKKVKVRWFHHNQEVKGVVSLR-NPHPKEVFITPHSQVISAECVDGSASVLTREHFSKCLAAFPNALL 267 (686)
Q Consensus 195 YED~k------g~k~V~VRWFh~~~Ev~~~lp~~-~~~~rEvf~s~~~Q~isvECiDG~AtVLtp~H~ek~~~~~~~~~~ 267 (686)
|++++ +..+|+||||-+..|+....+.. ....||||.|.....+++++|-|-..|.--+.+..+... ....-
T Consensus 714 ~~~~~s~~~~~~~~~vrV~wFyRPedt~~~~~~~~~~D~nELf~S~~~~~vp~~~I~GKC~V~~~~d~~~~i~~-y~~~g 792 (1330)
T 3av4_A 714 HCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGRCTVEYGEDLLESIQD-YSQGG 792 (1330)
T ss_dssp CCCEETTEECSSCCEEEEEEEECTTTSTTGGGTTTTSCTTBCEEEEEEEEEEGGGCCEEEEEEESTTCSSCHHH-HHHTS
T ss_pred EecCCccccCCCceEEEEEEeeChhhcccccccccccCcceEEeeccceecCHHHcCceEEEEecccccccccc-cccCC
Confidence 99876 57899999999999876443322 457799999999999999999999999754444332111 00011
Q ss_pred eeEEEEEeeccCC
Q 044464 268 ARVHLCTRQFRSN 280 (686)
Q Consensus 268 ~~~~~C~rq~~n~ 280 (686)
...|+|...|+..
T Consensus 793 ~d~Fy~~~~Yd~~ 805 (1330)
T 3av4_A 793 PDRFYFLEAYNSK 805 (1330)
T ss_dssp TTEEEESCEEETT
T ss_pred CCeEEEEEEeccc
Confidence 2469998888765
No 10
>1m4z_A Origin recognition complex subunit 1; DNA replication, transcriptional silencing, chromatin, BAH D gene regulation; 2.20A {Saccharomyces cerevisiae} SCOP: b.34.12.1 PDB: 1zhi_A 1zbx_A
Probab=97.53 E-value=6.2e-05 Score=76.48 Aligned_cols=136 Identities=13% Similarity=0.103 Sum_probs=103.1
Q ss_pred CCeEEEEeeEEEEEecCCceeEeeehhhhcccCCCee--EEEEeeeccceeeee------ecCCC---------------
Q 044464 167 NGTTISIQSFVFVMAKGENHYVAYLEDMYEDKRGQKK--VKVRWFHHNQEVKGV------VSLRN--------------- 223 (686)
Q Consensus 167 nG~tIsVh~FVyv~aee~~~~vAYlEDmYED~kg~k~--V~VRWFh~~~Ev~~~------lp~~~--------------- 223 (686)
+|+.|++.|-|.|-.+..+-|.+||=--.-=.-+++- +.|-||.+-.|+... +|...
T Consensus 49 Dg~~~~~GDsVlv~~~~~~sysv~LI~eIrl~t~~n~vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~~~~ 128 (238)
T 1m4z_A 49 DGIKLGRGDSVVMHNEAAGTYSVYMIQELRLNTLNNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYNKLFSE 128 (238)
T ss_dssp TCCEECTTCEEEEEETTTTEEEEEEEEEEEEETTTTEEEEEEEEEECGGGSCHHHHHHHHCHHHHHSCCCHHHHHHHHHH
T ss_pred CCcEEeCCCEEEEecCCCCceEEEEEEEEEecCCCceEEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhhhhc
Confidence 7999999999999887777777776443322222334 456999999999873 56211
Q ss_pred -CCCceEEEcCCceeeeeeeeeccccccChHHHHHHHhhccccceeeEEEEEeeccCC--Cccceeeccccccch-----
Q 044464 224 -PHPKEVFITPHSQVISAECVDGSASVLTREHFSKCLAAFPNALLARVHLCTRQFRSN--RLKPFDLSKLHGYHD----- 295 (686)
Q Consensus 224 -~~~rEvf~s~~~Q~isvECiDG~AtVLtp~H~ek~~~~~~~~~~~~~~~C~rq~~n~--~vKpFditql~GY~~----- 295 (686)
.+.-|||+|+++-.|-+++|-++|.|||...|+..-. +......|+|++-++.+ ++-+||+..++-...
T Consensus 129 ~~~~nELflTa~l~eI~l~diI~~anVls~~Ef~~i~~---d~~~~~tFf~R~~cd~~~~~f~~iD~~~~~~~i~~~~p~ 205 (238)
T 1m4z_A 129 TANKNELYLTAELAELQLFNFIRVANVMDGSKWEVLKG---NVDPERDFTVRYICEPTGEKFVDINIEDVKAYIKKVEPR 205 (238)
T ss_dssp HSCTTEEEEEEEEEEECGGGEEEEEEEECHHHHHHHGG---GCCTTTEEEEEEECCTTSCCCEECCHHHHHHHHTTSCHH
T ss_pred ccccceEEEeccHHHHhHHhhhhheEeccHHHHhhhcc---ccccCceEEEEEEEcCCcCccccccHHHHHHHHHhcCHH
Confidence 6999999999999999999999999999999997322 23334789999999765 577999998877654
Q ss_pred --hhHhhhcCCC
Q 044464 296 --QPILSLLNSN 305 (686)
Q Consensus 296 --QeIl~~l~~~ 305 (686)
.+.|+-|.++
T Consensus 206 ~~~e~lk~lt~~ 217 (238)
T 1m4z_A 206 EAQEYLKDLTLP 217 (238)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHhccc
Confidence 4566666543
No 11
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=97.50 E-value=0.00037 Score=56.09 Aligned_cols=54 Identities=15% Similarity=0.273 Sum_probs=44.9
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCC
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPT 472 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~ 472 (686)
.|++|+.+-..-.++ |.||||+|+++. .+++.|.|.|+-+ .|.|+.+ .|||.
T Consensus 3 ~~~~G~~c~A~~s~D---g~wYrA~I~~i~~~~~~~~V~f~DYGn-------~e~v~~~----------------~Lr~~ 56 (59)
T 1mhn_A 3 QWKVGDKCSAIWSED---GCIYPATIASIDFKRETCVVVYTGYGN-------REEQNLS----------------DLLSP 56 (59)
T ss_dssp CCCTTCEEEEECTTT---SCEEEEEEEEEETTTTEEEEEETTTTE-------EEEEEGG----------------GCBCT
T ss_pred cCCcCCEEEEEECCC---CCEEEEEEEEEcCCCCEEEEEEEcCCC-------EEEEcHH----------------HeeCC
Confidence 589999999986555 579999999986 4899999999843 5889875 78998
Q ss_pred CC
Q 044464 473 PP 474 (686)
Q Consensus 473 PP 474 (686)
||
T Consensus 57 ~~ 58 (59)
T 1mhn_A 57 IC 58 (59)
T ss_dssp TC
T ss_pred CC
Confidence 86
No 12
>2fl7_A Regulatory protein SIR3; ORC, silencing, chromatin, transcription; 1.85A {Saccharomyces cerevisiae} PDB: 2fvu_A 3tu4_K*
Probab=97.33 E-value=5.7e-05 Score=76.53 Aligned_cols=135 Identities=13% Similarity=0.123 Sum_probs=98.5
Q ss_pred CCeEEEEeeEEEEEecCCceeEeeehhhhcccCCC--e--eEEEEeeeccceeeee------ecCCC-------------
Q 044464 167 NGTTISIQSFVFVMAKGENHYVAYLEDMYEDKRGQ--K--KVKVRWFHHNQEVKGV------VSLRN------------- 223 (686)
Q Consensus 167 nG~tIsVh~FVyv~aee~~~~vAYlEDmYED~kg~--k--~V~VRWFh~~~Ev~~~------lp~~~------------- 223 (686)
+|+.|++.|-|.|-.+..+-|.+||=--. +.|. + -+.|-||.+-.|+... +|.-.
T Consensus 49 Dg~~~~~GDsVlv~~~~~~sysv~LI~eI--rl~t~~n~vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~~ 126 (232)
T 2fl7_A 49 DGLSFGKGESVIFNDNVTETYSVYLIHEI--RLNTLNNVVEIWVFSYLRWFELKPKLYYEQFRPDLIKEDHPLEFYKDKF 126 (232)
T ss_dssp TCCEECTTCEEEEEETTTTEEEEEEEEEE--EC-----CCEEEEEEEECGGGSCHHHHHHHHCHHHHHTTCCHHHHHHHH
T ss_pred CCcEEeCCCEEEEecCCCCceEEEEEEEE--EecCCCceEEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhhh
Confidence 79999999999998877777777764333 2222 2 3567999999999773 55211
Q ss_pred ---CCCceEEEcCCceeeeeeeeeccccccChHHHHHHHhhccccceeeEEEEEeeccCC--Cccceeeccccccc----
Q 044464 224 ---PHPKEVFITPHSQVISAECVDGSASVLTREHFSKCLAAFPNALLARVHLCTRQFRSN--RLKPFDLSKLHGYH---- 294 (686)
Q Consensus 224 ---~~~rEvf~s~~~Q~isvECiDG~AtVLtp~H~ek~~~~~~~~~~~~~~~C~rq~~n~--~vKpFditql~GY~---- 294 (686)
.+.-|||+|+++-.|-+++|-++|.|||...|+..-. +......|+|++-++.+ ++-+||+..++-..
T Consensus 127 ~~~~~~nELflTa~l~eI~l~diI~~anVls~~Ef~~l~~---d~~~~~tFf~R~~cd~~~~~f~~iD~~~~~~~i~~~~ 203 (232)
T 2fl7_A 127 FNEVNKSELYLTAELSEIWLKDFIAVGQILPESQWNDSSI---DKIEDRDFLVRYACEPTAEKFVPIDIFQIIRRVKEME 203 (232)
T ss_dssp HHHSCTTEEEEEEEEEEECGGGEEEECEEECTTTC----------CTTTEEEEEEECCTTSCSCEECCHHHHHHHHHHSC
T ss_pred hcccccceEEEeccHHHHHHHhhhhheEeccHHHHHHhcc---cccCCceEEEEEEEcCCcCccccccHHHHHHHHHhcC
Confidence 6999999999999999999999999999999997311 12224679999999765 57799999987765
Q ss_pred ---hhhHhhhcCCCC
Q 044464 295 ---DQPILSLLNSNT 306 (686)
Q Consensus 295 ---~QeIl~~l~~~~ 306 (686)
..|-|+-|.++.
T Consensus 204 p~~~~e~lk~lt~~~ 218 (232)
T 2fl7_A 204 PKQSDEYLKRVSVPV 218 (232)
T ss_dssp HHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhcccC
Confidence 345566665543
No 13
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=97.04 E-value=0.002 Score=56.41 Aligned_cols=56 Identities=14% Similarity=0.253 Sum_probs=45.3
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeC--CeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCC
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ--KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRP 471 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~--~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP 471 (686)
..+++|+.+-.+--++ |.||||+|.++.. ++|.|.|.++-+ .|.|+++ .|||
T Consensus 9 ~~~kvGd~C~A~ys~D---g~wYrA~I~~i~~~~~~~~V~fiDYGN-------~E~V~~~----------------~Lrp 62 (88)
T 1g5v_A 9 QQWKVGDKCSAIWSED---GCIYPATIASIDFKRETCVVVYTGYGN-------REEQNLS----------------DLLS 62 (88)
T ss_dssp CCCCSSCEEEEECTTT---CCEEEEEEEEEETTTTEEEEEETTTCC-------EEEEEGG----------------GCBC
T ss_pred CCCCCCCEEEEEECCC---CCEEEEEEEEecCCCCEEEEEEecCCC-------EEEEcHH----------------Hccc
Confidence 4689999999997665 5799999999874 899999999844 5889875 6899
Q ss_pred CCCC
Q 044464 472 TPPD 475 (686)
Q Consensus 472 ~PP~ 475 (686)
.|+.
T Consensus 63 ~~~~ 66 (88)
T 1g5v_A 63 PICE 66 (88)
T ss_dssp CC--
T ss_pred CChh
Confidence 8874
No 14
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.04 E-value=0.0013 Score=55.83 Aligned_cols=54 Identities=11% Similarity=0.188 Sum_probs=45.1
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeC-CeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCC
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPT 472 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~ 472 (686)
..|++|+.|..+-. + |.||+|+|.++.. ++|.|.|.|+ + .|.|+.+ .|||.
T Consensus 8 ~~~kvGd~clA~ws-D---g~~Y~A~I~~v~~~~~~~V~f~Dy-n-------~e~v~~~----------------~lrpl 59 (74)
T 2equ_A 8 FDFKAGEEVLARWT-D---CRYYPAKIEAINKEGTFTVQFYDG-V-------IRCLKRM----------------HIKAM 59 (74)
T ss_dssp CCCCTTCEEEEECS-S---SSEEEEEEEEESTTSSEEEEETTS-C-------EEEECGG----------------GEECC
T ss_pred CCCCCCCEEEEECC-C---CCEEEEEEEEECCCCEEEEEEecC-C-------eEEecHH----------------HCeeC
Confidence 57899999999965 3 6899999999865 7899999986 3 5788764 79999
Q ss_pred CCC
Q 044464 473 PPD 475 (686)
Q Consensus 473 PP~ 475 (686)
|+.
T Consensus 60 p~~ 62 (74)
T 2equ_A 60 PED 62 (74)
T ss_dssp CGG
T ss_pred Chh
Confidence 884
No 15
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=96.99 E-value=0.0021 Score=53.43 Aligned_cols=51 Identities=12% Similarity=0.330 Sum_probs=40.8
Q ss_pred cccCCCCCCEEEEEecCCcceeeEEEEEEEEe--eCCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 392 YSAMYKVNAKIELLCQDSGIRGCWFRCIVLQV--SQKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 392 ~~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~--~~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
....|++|.++|+... ++-|+.|||+++ .+.+++|.|+.... ..-||++..
T Consensus 9 ~~~~F~vGmkLEa~d~----~~p~~~AtV~~v~~~~~~~~VhfdGw~~-----~~D~W~~~d 61 (69)
T 3sd4_A 9 RGISFEVGAQLEARDR----LKNWYPAHIEDIDYEEGKVLIHFKRWNH-----RYDEWFCWD 61 (69)
T ss_dssp TTCCCSTTCEEEEECT----TSCEEEEEEEEEETTTTEEEEEETTSCG-----GGCEEEETT
T ss_pred CCCCcCCCCEEEEEEC----CCCccccEEEEEeccCCEEEEEeCCCCC-----CCCEEEcCC
Confidence 3568999999999964 456799999997 67899999998732 345999964
No 16
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=96.98 E-value=0.0061 Score=58.62 Aligned_cols=89 Identities=20% Similarity=0.343 Sum_probs=64.6
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeC--------------------CeEEEEeCcccCCCCCCcceEEEeccc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ--------------------KQMKVRYDDVQDEDGSGNLEEWIPVYK 452 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~--------------------~ky~VeY~dL~deDgs~~L~EwV~~sr 452 (686)
...|++|+.|.++-. ..||||.|+|+++.+ --|.|+|+++.... . -.+.+
T Consensus 8 ~glYKinelVDarD~---~~GAWFEA~Iv~Vtr~~~~~~~p~~s~~~~~~~edviYhVkyddype~g---v--v~~~~-- 77 (161)
T 3db3_A 8 LGLYKVNEYVDARDT---NMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEEDVIYHVKYDDYPENG---V--VQMNS-- 77 (161)
T ss_dssp CCSSCTTCEEEEECT---TTCCEEEEEEEEEEEC-----------------CCEEEEEEESSCGGGC---E--EEEEG--
T ss_pred cceEEecceeeeecc---CCCcceEEEEEEEEecCCCCCCcccccccCCCcCceEEEEEeccCccCC---e--Eecch--
Confidence 368999999999854 368999999998532 24899999985431 1 12332
Q ss_pred ccCCCccCCCCCCCCCcCCCCCCCCCCCCcCCCCEEEEeeC-------CCeeEEEEEEEe
Q 044464 453 VAKPDKLGMRCSDRPTIRPTPPDNREDLSLGIGTAVDAWWS-------DGWWEGVVIGVD 505 (686)
Q Consensus 453 ~a~pd~~g~R~~~R~~IRP~PP~~~~~~~~~vGD~VDAw~~-------DGWWeGVV~kv~ 505 (686)
..|||..-....-..+++|+.|=+-|| |=|.-+.|+++.
T Consensus 78 --------------~~iRpRARt~l~w~~L~vGqvVMvNYN~d~PkerGfWYDaeI~~~~ 123 (161)
T 3db3_A 78 --------------RDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKR 123 (161)
T ss_dssp --------------GGEECCCCCBCCGGGCCTTCEEEEEECSSSTTSCCEEEEEEEEEEE
T ss_pred --------------hccccceEEeccHHHCCcCcEEEEecCCCCccccceeEEEEEeeeh
Confidence 268888654333356899999999998 446689998875
No 17
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=96.93 E-value=0.0038 Score=63.08 Aligned_cols=88 Identities=20% Similarity=0.365 Sum_probs=61.7
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEeeC-----------CeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCC
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-----------KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRC 463 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-----------~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~ 463 (686)
.|++|+.|+++-.. .||||.|+|+++.+ --|.|+|+++.... . -.+...
T Consensus 2 ~yki~~~vd~~d~~---~Gawfea~i~~v~~~~~~~~~~~d~~~y~v~y~~~~~~~---~--~~~~~~------------ 61 (226)
T 3ask_A 2 LYKVNEYVDARDTN---MGAWFEAQVVRVTRKAPSRPALEEDVIYHVKYDDYPENG---V--VQMNSR------------ 61 (226)
T ss_dssp CSCTTCEEEEECTT---TCCEEEEEEEEEEECC------CCCEEEEEEETTCGGGC---E--EEEEGG------------
T ss_pred ccccCceEEeeecC---CCceeEEEEEEEeccccccCCCCCceEEEeecccCcccC---c--eecccc------------
Confidence 58999999998643 58999999998743 24889999986431 1 112211
Q ss_pred CCCCCcCCCCCCCCCCCCcCCCCEEEEee-------CCCeeEEEEEEEec
Q 044464 464 SDRPTIRPTPPDNREDLSLGIGTAVDAWW-------SDGWWEGVVIGVDS 506 (686)
Q Consensus 464 ~~R~~IRP~PP~~~~~~~~~vGD~VDAw~-------~DGWWeGVV~kv~~ 506 (686)
.|||.--....-..+.+|+.|=+.| .|-||-+.|+++..
T Consensus 62 ----~irprar~~~~~~~l~~g~~vm~nyn~~~~~~~G~~y~~~I~~~~~ 107 (226)
T 3ask_A 62 ----DVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRE 107 (226)
T ss_dssp ----GEEECCCCBCCGGGCCTTCEEEEEECTTSTTSCCEEEEEEEEEEEE
T ss_pred ----cccccccccCCccccccCcEEEEecccCCccccCceeehhhhhhhh
Confidence 3444432111124688999999999 78999999999863
No 18
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=96.88 E-value=0.0031 Score=51.57 Aligned_cols=49 Identities=12% Similarity=0.291 Sum_probs=40.5
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeC--CeEEEEeCcccCCCCCCcceEEEecc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ--KQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~--~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
...+++|+.+-++-.++| .||+|+|+++.. +.+.|.|.++-+ +|.|+++
T Consensus 6 ~~~~~vGd~c~A~~s~Dg---~wYrA~I~~v~~~~~~~~V~fvdYGn-------~e~V~~~ 56 (64)
T 4a4f_A 6 THSWKVGDKCMAVWSEDG---QCYEAEIEEIDEENGTAAITFAGYGN-------AEVTPLL 56 (64)
T ss_dssp SSCCCTTCEEEEECTTTS---SEEEEEEEEEETTTTEEEEEETTTTE-------EEEEEGG
T ss_pred CCCCCCCCEEEEEECCCC---CEEEEEEEEEcCCCCEEEEEEEecCC-------EEEEeHH
Confidence 357899999999976664 799999999874 789999999843 5889875
No 19
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=96.85 E-value=0.0024 Score=54.30 Aligned_cols=56 Identities=16% Similarity=0.262 Sum_probs=46.0
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeC--CeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCC
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ--KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRP 471 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~--~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP 471 (686)
..+++|+.+-..-.++ |.||||+|+++.. +++.|.|.|+-+ .|.|+.+ .|||
T Consensus 8 ~~~~~G~~c~A~~s~D---g~wYRA~I~~i~~~~~~~~V~fiDYGN-------~e~V~~~----------------~Lr~ 61 (78)
T 2d9t_A 8 KVWKPGDECFALYWED---NKFYRAEVEALHSSGMTAVVKFTDYGN-------YEEVLLS----------------NIKP 61 (78)
T ss_dssp CCCCTTCEEEEECTTT---CCEEEEEEEEECSSSSEEEEEETTTTE-------EEEEEGG----------------GEEE
T ss_pred cCCCcCCEEEEEECCC---CCEEEEEEEEEeCCCCEEEEEEEcCCC-------eEEEcHH----------------HeEe
Confidence 4578999999987655 5899999999864 789999999843 5889875 7899
Q ss_pred CCCC
Q 044464 472 TPPD 475 (686)
Q Consensus 472 ~PP~ 475 (686)
.|+.
T Consensus 62 l~~~ 65 (78)
T 2d9t_A 62 VQTE 65 (78)
T ss_dssp CCCC
T ss_pred CCHH
Confidence 9884
No 20
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=96.74 E-value=0.0051 Score=48.42 Aligned_cols=47 Identities=17% Similarity=0.175 Sum_probs=37.8
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
.+++|+.+-..-.++| .||||+|+++. ++.+.|.|.|+-+ .|.|+.+
T Consensus 1 ~wk~G~~c~A~~s~Dg---~wYrA~I~~i~~~~~~~~V~fvDYGn-------~e~v~~~ 49 (54)
T 3s6w_A 1 MWKPGDECFALYWEDN---KFYRAEVEALHSSGMTAVVKFIDYGN-------YEEVLLS 49 (54)
T ss_dssp CCCTTCEEEEEETTTT---EEEEEEEEEC--CCSEEEEEETTTCC-------EEEEEGG
T ss_pred CCCCCCEEEEEECCCC---CEEEEEEEEEeCCCCEEEEEEEccCC-------eEEEeHH
Confidence 3789999999975554 79999999974 4789999999843 5888875
No 21
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=96.65 E-value=0.0058 Score=51.96 Aligned_cols=56 Identities=18% Similarity=0.245 Sum_probs=43.8
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCC
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRP 471 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP 471 (686)
..+++|+.+-.+-.++ |.||||+|+++. ++.+.|.|.|+-+ .|.|+.+ .|||
T Consensus 16 ~~~kvGd~C~A~ys~D---g~wYRA~I~~i~~~~~~~~V~fvDYGN-------~e~V~~~----------------~Lr~ 69 (77)
T 3pnw_C 16 KMWKPGDECFALYWED---NKFYRAEVEALHSSGMTAVVKFIDYGN-------YEEVLLS----------------NIKP 69 (77)
T ss_dssp TTCCTTCEEEEEETTT---TEEEEEEEEEECTTSSEEEEEETTTCC-------EEEEEGG----------------GEEC
T ss_pred CCCCcCCEEEEEECCC---CCEEEEEEEEEeCCCCEEEEEEEcCCC-------eEEEeHH----------------HeEE
Confidence 4689999999997555 489999999985 4689999999833 6889875 7999
Q ss_pred CCCC
Q 044464 472 TPPD 475 (686)
Q Consensus 472 ~PP~ 475 (686)
.|+.
T Consensus 70 l~~~ 73 (77)
T 3pnw_C 70 IQTE 73 (77)
T ss_dssp C---
T ss_pred CChh
Confidence 9873
No 22
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=96.50 E-value=0.011 Score=51.55 Aligned_cols=50 Identities=18% Similarity=0.426 Sum_probs=40.9
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
...|++|.+||+... ++.|+.|+|+.+. +.+|+|.|+.... .--||++..
T Consensus 17 ~~~F~vGmkLEA~D~----~~~~~~a~i~~v~~~~~~v~VHfdGW~~-----~yDeWv~~d 68 (88)
T 2eqm_A 17 GITFEIGARLEALDY----LQKWYPSRIEKIDYEEGKMLVHFERWSH-----RYDEWIYWD 68 (88)
T ss_dssp SCCCCSSCEEEEECT----TSCEEEEEEEEEETTTTEEEEEESSSTT-----TEEEEEETT
T ss_pred cCcCCCCCEEEEEcC----CCCeeEEEEEEEeccCCEEEEEECCCCC-----cccEEeeCC
Confidence 568999999999974 5689999999865 6899999998732 346999964
No 23
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=96.33 E-value=0.12 Score=52.53 Aligned_cols=116 Identities=16% Similarity=0.196 Sum_probs=77.3
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEeccc---------------ccCCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYK---------------VAKPD 457 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr---------------~a~pd 457 (686)
...|++|.++|+.-... -+.+..|||+++.+.+++|+|+...+. -..|+.+.. +..|
T Consensus 60 ~~~f~vGmKLEa~D~~~--~~~~~vATV~~v~g~~l~l~~dG~d~~-----~DfW~~~~S~~I~PvGwc~~~g~~L~pP- 131 (243)
T 2biv_A 60 VNDFKVGMKLEARDPRN--ATSVCIATVIGITGARLRLRLDGSDNR-----NDFWRLVDSPDIQPVGTCEKEGDLLQPP- 131 (243)
T ss_dssp CCCCCTTCEEEEEETTE--EEEEEEEEEEEEETTEEEEEETTSCSS-----SCEEEETTCTTEECTTHHHHTTCCCCCC-
T ss_pred cccccCCCEEEEecCCC--CCcEEEEEEEEEeCCEEEEEECCCCCC-----CCEeecCCCCccccChhHHhcCCccCCC-
Confidence 35799999999986443 368999999999999999999876321 147887631 1111
Q ss_pred ccCCCCCC--------C--CCcCCCCCCC-------CCCCCcCCCCEEEEeeCC---CeeEEEEEEEecCCCCeEEEEEC
Q 044464 458 KLGMRCSD--------R--PTIRPTPPDN-------REDLSLGIGTAVDAWWSD---GWWEGVVIGVDSSSTDNLQVYLS 517 (686)
Q Consensus 458 ~~g~R~~~--------R--~~IRP~PP~~-------~~~~~~~vGD~VDAw~~D---GWWeGVV~kv~~~g~~ky~VyFp 517 (686)
.|++... + .--+++|+.. .....|++|..+||-..- -+|.++|++|. +.++.|.|.
T Consensus 132 -~g~~~~~f~W~~yL~~tl~ga~~aP~~lF~~~~~~~~~~~F~~GmKLEavD~~~p~~icvATV~~v~---g~rl~v~fD 207 (243)
T 2biv_A 132 -LGYQMNTSSWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVK---GDEVHITFD 207 (243)
T ss_dssp -TTCSSCGGGHHHHHHHHHTTCCBCCGGGSCCCCCCCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEE---TTEEEEEET
T ss_pred -cccccccchHHHHHHHhccCCccCCHHHhccCCCCCccccccCCCEEEEEccCCCCeEEEEEEEEec---CCEEEEEEC
Confidence 1222100 0 0112233211 112579999999997544 79999999996 678999999
Q ss_pred Ccc
Q 044464 518 GES 520 (686)
Q Consensus 518 Ge~ 520 (686)
|-.
T Consensus 208 gw~ 210 (243)
T 2biv_A 208 GWS 210 (243)
T ss_dssp TSC
T ss_pred CCC
Confidence 854
No 24
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=96.32 E-value=0.013 Score=49.88 Aligned_cols=55 Identities=11% Similarity=0.170 Sum_probs=43.8
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeC----CeEEEEeCcccCCCCCCcceEEEeccccc
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ----KQMKVRYDDVQDEDGSGNLEEWIPVYKVA 454 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~----~ky~VeY~dL~deDgs~~L~EwV~~sr~a 454 (686)
..|.+|++|.|...+ |-.|.|++|+|+++.. .+|+|-|...- ..+-|||+.+++.
T Consensus 4 ~~~~vGekV~~~~~d-~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gwn-----kr~DEWV~~~ri~ 62 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGR-GKTQKIYEASIKSTEIDDGEVLYLVHYYGWN-----VRYDEWVKADRII 62 (76)
T ss_dssp CCSSTTCEEEEEEEE-TTEEEEEEEEEEEEEEETTEEEEEEEETTSC-----CSSCEEEEGGGEE
T ss_pred cccCCCCEEEEEeCC-CCCCCEEEEEEEEEEccCCceEEEEEeCCcC-----CCceEecChhhcc
Confidence 479999999999753 5568999999999742 36999999873 3578999987653
No 25
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=96.16 E-value=0.094 Score=55.49 Aligned_cols=116 Identities=15% Similarity=0.230 Sum_probs=76.8
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEeccc---------------ccCCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYK---------------VAKPD 457 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr---------------~a~pd 457 (686)
...|++|.++|+.-.. --..+.-|||+++.+.+++|+|+...+. ..-|+.+.. +..|.
T Consensus 39 ~~~f~~GmklE~~D~~--~~~~~~vAtV~~v~G~rl~l~~dg~~~~-----~dFW~~~~S~~IhPvGwc~~~g~~L~pP~ 111 (331)
T 1oz2_A 39 KNGFKLGMKLEGIDPQ--HPSMYFILTVAEVCGYRLRLHFDGYSEC-----HDFWVNANSPDIHPAGWFEKTGHKLQPPK 111 (331)
T ss_dssp CCCCCTTCEEEEEETT--EEEEEEEEEEEEEETTEEEEEETTSCGG-----GCEEEETTCTTEECTTHHHHHTCCEECCT
T ss_pred ccccCCCCEEEEEeCC--CCCcEEEEEEEEecCCEEEEEECCCCCC-----CCEEEcCCCCCcccCchHHhcCCcccCcc
Confidence 4579999999998443 3558999999999999999999987531 236776531 01111
Q ss_pred ccCCCCCC--------CCCcCCCCCCC-------CCCCCcCCCCEEEEee---CCCeeEEEEEEEecCCCCeEEEEECCc
Q 044464 458 KLGMRCSD--------RPTIRPTPPDN-------REDLSLGIGTAVDAWW---SDGWWEGVVIGVDSSSTDNLQVYLSGE 519 (686)
Q Consensus 458 ~~g~R~~~--------R~~IRP~PP~~-------~~~~~~~vGD~VDAw~---~DGWWeGVV~kv~~~g~~ky~VyFpGe 519 (686)
|.+... ...-+++|... .....|++|..+||.. ...+|.++|+++. +.++.|.|.|.
T Consensus 112 --~~~~~~f~W~~yL~~t~a~~aP~~lF~~~~~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~---g~r~~v~~Dg~ 186 (331)
T 1oz2_A 112 --GYKEEEFSWSQYLRSTRAQAAPKHLFVSQSHSPPPLGFQVGMKLEAVDRMNPSLVCVASVTDVV---DSRFLVHFDNW 186 (331)
T ss_dssp --TCCGGGCCHHHHHHHHTCCBCCGGGCSCSSCSCCCTTCCTTCEEEEECTTSTTCEEEEEEEEEE---TTEEEEEETTS
T ss_pred --ccccccCcHHHHHHhcCCCCCChHHhcccCCCCCccccccccEEEeccCCCCCcEEEEEEEEee---CCEEEEEeCCC
Confidence 111000 00011222210 1134699999999987 4699999999996 56899999985
Q ss_pred c
Q 044464 520 S 520 (686)
Q Consensus 520 ~ 520 (686)
.
T Consensus 187 ~ 187 (331)
T 1oz2_A 187 D 187 (331)
T ss_dssp C
T ss_pred C
Confidence 4
No 26
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=96.08 E-value=0.01 Score=53.31 Aligned_cols=53 Identities=17% Similarity=0.378 Sum_probs=42.7
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee----CCeEEEEeCcccCCCCCCcceEEEecccccC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS----QKQMKVRYDDVQDEDGSGNLEEWIPVYKVAK 455 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~----~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~ 455 (686)
.+.|.+|++|.|.. .|.||.|+||++. ..+|+|-|...- ..+-|||+..|+..
T Consensus 20 ~~~f~vGekVl~~~-----~~~~YeAkIl~v~~~~~~~~Y~VHY~GwN-----kR~DEWV~~~Rl~k 76 (102)
T 2f5k_A 20 KPKFQEGERVLCFH-----GPLLYEAKCVKVAIKDKQVKYFIHYSGWN-----KNWDEWVPESRVLK 76 (102)
T ss_dssp SCSCCTTCEEEEES-----SSSEEEEEEEEEEEETTEEEEEEEETTSC-----GGGCEEEEGGGEEE
T ss_pred CcccCCCCEEEEEE-----CCEEEEEEEEEEEEcCCCcEEEEEeCCcC-----CCceeeccHhhccc
Confidence 56899999999986 3789999999975 247999999873 35789999875433
No 27
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=96.07 E-value=0.013 Score=50.66 Aligned_cols=56 Identities=20% Similarity=0.347 Sum_probs=44.4
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeC-CeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCC
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPT 472 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~ 472 (686)
...++|+.+-+...++ |.||||+|+++.. +.+.|.|-|+-+ .|.|+.+ .|||.
T Consensus 26 ~~~~~G~~c~a~~~~d---~~wyRA~I~~~~~~~~~~V~fvDyGn-------~e~v~~~----------------~lr~l 79 (94)
T 3fdr_A 26 LTVHVGDIVAAPLPTN---GSWYRARVLGTLENGNLDLYFVDFGD-------NGDCPLK----------------DLRAL 79 (94)
T ss_dssp CCCCTTCEEEEEETTT---TEEEEEEEEEECTTSCEEEEETTTCC-------EEEECGG----------------GCEEC
T ss_pred CCCCCCCEEEEEECCC---CeEEEEEEEEECCCCeEEEEEEcCCC-------eEEEEHH----------------Hhhhc
Confidence 3578999999986444 6899999999864 689999999843 5888865 67888
Q ss_pred CCC
Q 044464 473 PPD 475 (686)
Q Consensus 473 PP~ 475 (686)
|+.
T Consensus 80 ~~~ 82 (94)
T 3fdr_A 80 RSD 82 (94)
T ss_dssp CGG
T ss_pred CHH
Confidence 763
No 28
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=96.05 E-value=0.013 Score=45.97 Aligned_cols=51 Identities=14% Similarity=0.105 Sum_probs=42.7
Q ss_pred CcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcc
Q 044464 481 SLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRI 532 (686)
Q Consensus 481 ~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRp 532 (686)
.|++|+.+=|-+ ++.|..++|+++. ..++.+.|+|-+=|..-.++.++|||
T Consensus 1 ~wk~G~~c~A~~s~Dg~wYrA~I~~i~-~~~~~~~V~fvDYGn~e~v~~~~lrp 53 (54)
T 3s6w_A 1 MWKPGDECFALYWEDNKFYRAEVEALH-SSGMTAVVKFIDYGNYEEVLLSNIKP 53 (54)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEC---CCSEEEEEETTTCCEEEEEGGGEEC
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEEe-CCCCEEEEEEEccCCeEEEeHHHEEE
Confidence 389999999987 5679999999985 24578999999877778889999998
No 29
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=96.04 E-value=0.2 Score=51.58 Aligned_cols=118 Identities=18% Similarity=0.244 Sum_probs=76.8
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEeccc---------------ccCCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYK---------------VAKPD 457 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr---------------~a~pd 457 (686)
...|++|.++|+.-... -..+..|||+++.+.++.|+|+...+ ....|+.+.. +..|.
T Consensus 32 ~~~F~vGMKLEavDp~~--~~~icvATV~~v~g~~l~l~~DG~d~-----~~DfW~~~~S~~I~PvGwc~~~g~~L~pP~ 104 (265)
T 2r58_A 32 NNDFKIGMKLEALDPRN--VTSTCIATVVGVLGSRLRLRLDGSDS-----QNDFWRLVDSTEIHAIGHCEKNGGMLQPPL 104 (265)
T ss_dssp CCCCCTTCEEEEEETTE--EEEEEEEEEEEEETTEEEEEETTSCS-----SCCEEEETTCTTEECTTHHHHTTCCCCCCT
T ss_pred ccccccCCEeEEecCCC--CCCEEEEEEEEEeCCEEEEEeCCCCC-----cCCEeEeCCCCCeeccccHHhcCCcccCcc
Confidence 35799999999986544 45789999999999999999986421 1236877631 11121
Q ss_pred cc----------------CCCCCCCCCcCCCCCCCCCCCCcCCCCEEEEee---CCCeeEEEEEEEecCCCCeEEEEECC
Q 044464 458 KL----------------GMRCSDRPTIRPTPPDNREDLSLGIGTAVDAWW---SDGWWEGVVIGVDSSSTDNLQVYLSG 518 (686)
Q Consensus 458 ~~----------------g~R~~~R~~IRP~PP~~~~~~~~~vGD~VDAw~---~DGWWeGVV~kv~~~g~~ky~VyFpG 518 (686)
.. |.+.......++.+|. .....|++|..+||-. ..-+|.++|+++. +.++.|.|.|
T Consensus 105 g~~~~~f~W~~yL~ktl~ga~~aP~~lF~~~~~~-~~~~~F~vGMKLEavD~~np~~icvATV~~v~---g~rl~v~fDG 180 (265)
T 2r58_A 105 GFCMNASSWPGYLCKILNNAMVAPEEIFQPEPPE-PEENLFKVGQKLEAVDKKNPQLICCATVDAIK---DDQIHVTFDG 180 (265)
T ss_dssp TCSSCGGGHHHHHHHHHTTCCBCCGGGSCCCCCC-CSSCCCCTTCEEEEECTTSTTCEEEEEEEEEE---TTEEEEEETT
T ss_pred ccccCcCCHHHHHHHhhcCCccCCHHHhcccCCC-CcccccccCcEEEeccCCCCCCEEEEEEEEec---CCEEEEEeCC
Confidence 00 1111111122222221 1234699999999964 3469999999996 6899999998
Q ss_pred cce
Q 044464 519 ESL 521 (686)
Q Consensus 519 e~d 521 (686)
-.+
T Consensus 181 w~~ 183 (265)
T 2r58_A 181 WRG 183 (265)
T ss_dssp SCG
T ss_pred CCC
Confidence 543
No 30
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=95.97 E-value=0.049 Score=54.61 Aligned_cols=121 Identities=19% Similarity=0.287 Sum_probs=87.8
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEee----CCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcC
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVS----QKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIR 470 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~----~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IR 470 (686)
.+++|+.|=.+... +.|++|+|+++. +.+|+|+|++- -+..|++..+ ..
T Consensus 8 ~l~Vg~~vlg~k~~----~~W~rg~v~~I~~~~~g~~YkVkF~~~--------g~~ivs~~hi---------------A~ 60 (213)
T 3dlm_A 8 DLIVSMRILGKKRT----KTWHKGTLIAIQTVGPGKKYKVKFDNK--------GKSLLSGNHI---------------AY 60 (213)
T ss_dssp TEETTCEEEEECTT----SBEEEEEEEEEEEETTEEEEEEEESSS--------CEEEECGGGE---------------EE
T ss_pred cEEEccEEEEEecC----CcEEEEEEEEEEECCCCeEEEEEEcCC--------CCEEeecceE---------------EE
Confidence 56799999988753 899999999952 46799999861 1356766533 23
Q ss_pred CCCCCCCCCCCcCCCCEEEEeeCCC----eeEEEEEEEec-CCCCeEEEEECCcceEEEeecCCCcceeeecCCceeeCC
Q 044464 471 PTPPDNREDLSLGIGTAVDAWWSDG----WWEGVVIGVDS-SSTDNLQVYLSGESLFLNVNKNDLRISRDWAGDQWVDIE 545 (686)
Q Consensus 471 P~PP~~~~~~~~~vGD~VDAw~~DG----WWeGVV~kv~~-~g~~ky~VyFpGe~del~f~~sdLRpsldW~dG~Wv~~~ 545 (686)
...|. ...+.+|..|=|.+.|+ ...|+|.+... .+..+|.|+|.. |-..=+.+.++|+-.+=....|..+.
T Consensus 61 ~~~p~---~~~l~vG~RVVA~~~~~~~~~fY~GiVaE~p~~~N~~RyLVFFDD-G~~~Yv~~~~V~~Vc~~s~~vW~di~ 136 (213)
T 3dlm_A 61 DYHPP---ADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDD-GYASYVTQSELYPICRPLKKTWEDIE 136 (213)
T ss_dssp SSCCC---GGGCCTTCEEEEEEECSSCEEEEEEEEEECCCTTTTSCEEEEETT-SCEEEECGGGEEEBSSCCSSGGGGCS
T ss_pred ecCCC---ccEEeEEEEEEEEecCCCCcceeeeEEEECCccCCCceEEEEEeC-CCcceecCceEEEEEEcccchhhhcC
Confidence 32222 13478999999999886 89999999854 245599999985 33344778888876666678999887
Q ss_pred C
Q 044464 546 D 546 (686)
Q Consensus 546 ~ 546 (686)
.
T Consensus 137 ~ 137 (213)
T 3dlm_A 137 D 137 (213)
T ss_dssp C
T ss_pred c
Confidence 4
No 31
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.82 E-value=0.019 Score=50.11 Aligned_cols=57 Identities=18% Similarity=0.231 Sum_probs=47.4
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee-CCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS-QKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRP 471 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~-~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP 471 (686)
....++|+.|-+...+.+ .||||+|+++. .+++.|.|-|+-+ +|+|++. .|||
T Consensus 19 ~~~~k~g~~vaak~~d~n---~WyRakV~~v~~~~~veVl~~DyGn-------~~~V~~~----------------~LR~ 72 (85)
T 2eqk_A 19 PVKWENDMHCAVKIQDKN---QWRRGQIIRMVTDTLVEVLLYDVGV-------ELVVNVD----------------CLRK 72 (85)
T ss_dssp CCCCCSSCEEEEECSSSC---CEEEEEEEEECSSSEEEEECTTTCC-------EEEEETT----------------TEEE
T ss_pred ccCccCCCEEEEEeCCCC---eEEEEEEEEecCCCeEEEEEEccCC-------EEEEEcc----------------cccc
Confidence 456799999999988765 99999999985 4789999999833 6899974 6899
Q ss_pred CCCC
Q 044464 472 TPPD 475 (686)
Q Consensus 472 ~PP~ 475 (686)
.||.
T Consensus 73 L~~~ 76 (85)
T 2eqk_A 73 LEEN 76 (85)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 9884
No 32
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.67 E-value=0.037 Score=48.42 Aligned_cols=56 Identities=20% Similarity=0.367 Sum_probs=44.7
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeC----CeEEEEeCcccCCCCCCcceEEEecccc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ----KQMKVRYDDVQDEDGSGNLEEWIPVYKV 453 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~----~ky~VeY~dL~deDgs~~L~EwV~~sr~ 453 (686)
...|.+|++|.|.-...+..|.|+.|+|+++.. ..|+|-|..+- ..|-|||+..++
T Consensus 7 ~~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~N-----kRlDEWV~~~rl 66 (87)
T 2eko_A 7 GGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFN-----RRLDEWVTHERL 66 (87)
T ss_dssp SCSCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSC-----SCCCEEECTTTB
T ss_pred cccccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCC-----cccccccCHhHc
Confidence 468999999999874444467999999999753 57999999982 368899998754
No 33
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=95.66 E-value=0.042 Score=44.03 Aligned_cols=51 Identities=18% Similarity=0.247 Sum_probs=44.3
Q ss_pred CcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcc
Q 044464 481 SLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRI 532 (686)
Q Consensus 481 ~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRp 532 (686)
.|++|+.+=|-| ++.|..++|+++. ...+.+.|+|.+=|..-++..++|||
T Consensus 3 ~~~~G~~c~A~~s~Dg~wYrA~I~~i~-~~~~~~~V~f~DYGn~e~v~~~~Lr~ 55 (59)
T 1mhn_A 3 QWKVGDKCSAIWSEDGCIYPATIASID-FKRETCVVVYTGYGNREEQNLSDLLS 55 (59)
T ss_dssp CCCTTCEEEEECTTTSCEEEEEEEEEE-TTTTEEEEEETTTTEEEEEEGGGCBC
T ss_pred cCCcCCEEEEEECCCCCEEEEEEEEEc-CCCCEEEEEEEcCCCEEEEcHHHeeC
Confidence 589999999987 5689999999995 33589999999877888899999998
No 34
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=95.64 E-value=0.2 Score=49.09 Aligned_cols=107 Identities=17% Similarity=0.221 Sum_probs=77.2
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIR 470 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IR 470 (686)
+..+++|+.|=.+-...+-.+.|+-|.|++.. +++|.|+=.+ ++ ++ +...++ +..|-
T Consensus 42 ~~~~~~G~~VAakvk~~~~~~~WILa~Vv~~~~~~~rYeV~D~d---~e--g~--~~~~~s--------------~~~II 100 (180)
T 3mea_A 42 DYVARPGDKVAARVKAVDGDEQWILAEVVSYSHATNKYEVDDID---EE--GK--ERHTLS--------------RRRVI 100 (180)
T ss_dssp TCCCCTTCEEEEEEECCC--EEEEEEEEEEEETTTTEEEEEECC---TT--CC--EEEEEE--------------GGGEE
T ss_pred CcccCCCCEEEEEcCCCCCCccEEEEEEEEEcCCCCEEEEecCC---CC--Cc--eeEEeC--------------HHHEE
Confidence 56899999999997654445899999999975 4788887443 22 22 333332 24788
Q ss_pred CCCCC--C---CCCCCcCCCCEEEEeeCC--CeeEEEEEEEecCCCCeEEEEECCcc
Q 044464 471 PTPPD--N---REDLSLGIGTAVDAWWSD--GWWEGVVIGVDSSSTDNLQVYLSGES 520 (686)
Q Consensus 471 P~PP~--~---~~~~~~~vGD~VDAw~~D--GWWeGVV~kv~~~g~~ky~VyFpGe~ 520 (686)
|.|.. . .....|..|+.|=|.|=+ +...++|...-....+.|.|.|.|+.
T Consensus 101 PLP~~~a~p~t~~~~~f~~G~~VLAlYP~TT~FY~A~V~~~p~~~~~~y~L~FEdde 157 (180)
T 3mea_A 101 PLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDTS 157 (180)
T ss_dssp ECCSBBCCTTTCGGGSCCTTCEEEEECTTSSEEEEEEEEECCSSTTCCEEEEEBCTT
T ss_pred ECCCcCCCcccCccccCCCCCEEEEeCCCCceeeEEEEecCCCCCCCcEEEEEcCCC
Confidence 88852 1 123579999999999988 99999999975434478999999864
No 35
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=95.49 E-value=0.027 Score=49.23 Aligned_cols=55 Identities=13% Similarity=0.242 Sum_probs=42.4
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeC-CeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRP 471 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP 471 (686)
...|++|++|..+- . -|.||+|+|.++.+ .+|.|.|.| - -.|.|... .|||
T Consensus 19 ~~~f~vGd~VlArW-~---D~~yYPAkI~sV~~~~~YtV~F~D-G-------~~etvk~~----------------~IKp 70 (85)
T 3qii_A 19 SSEFQINEQVLACW-S---DCRFYPAKVTAVNKDGTYTVKFYD-G-------VVQTVKHI----------------HVKA 70 (85)
T ss_dssp --CCCTTCEEEEEC-T---TSCEEEEEEEEECTTSEEEEEETT-S-------CEEEEEGG----------------GEEE
T ss_pred CcccccCCEEEEEe-C---CCCEeeEEEEEECCCCeEEEEEeC-C-------CeEEecHH----------------Hccc
Confidence 46899999999998 2 47999999999865 689999977 1 15788764 7899
Q ss_pred CCCC
Q 044464 472 TPPD 475 (686)
Q Consensus 472 ~PP~ 475 (686)
.|..
T Consensus 71 ~~~~ 74 (85)
T 3qii_A 71 FSKD 74 (85)
T ss_dssp CC--
T ss_pred CChh
Confidence 8763
No 36
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=95.45 E-value=0.059 Score=43.95 Aligned_cols=53 Identities=15% Similarity=0.183 Sum_probs=44.9
Q ss_pred CCcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 480 LSLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 480 ~~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
..|++||.+=|-| ++.|..++|.++. ...+.+.|+|-+=|..-.+..++|||-
T Consensus 7 ~~~~vGd~c~A~~s~Dg~wYrA~I~~v~-~~~~~~~V~fvdYGn~e~V~~~~Lrpl 61 (64)
T 4a4f_A 7 HSWKVGDKCMAVWSEDGQCYEAEIEEID-EENGTAAITFAGYGNAEVTPLLNLKPV 61 (64)
T ss_dssp SCCCTTCEEEEECTTTSSEEEEEEEEEE-TTTTEEEEEETTTTEEEEEEGGGEECC
T ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEEc-CCCCEEEEEEEecCCEEEEeHHHcEeC
Confidence 5699999999987 5679999999996 335789999997777777899999984
No 37
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=95.35 E-value=0.036 Score=46.42 Aligned_cols=54 Identities=11% Similarity=0.190 Sum_probs=42.8
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeC-CeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCC
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPT 472 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~ 472 (686)
+.|++|++|-.+. -.|.||+|+|.++.+ ..|.|.|.+ -. .|.|... .|||.
T Consensus 5 ~~~~vGd~vmArW----~D~~yYpA~I~si~~~~~Y~V~F~d-G~-------~etvk~~----------------~ikp~ 56 (67)
T 3p8d_A 5 SEFQINEQVLACW----SDCRFYPAKVTAVNKDGTYTVKFYD-GV-------VQTVKHI----------------HVKAF 56 (67)
T ss_dssp CCCCTTCEEEEEC----TTSCEEEEEEEEECTTSEEEEEETT-SC-------EEEEEGG----------------GEEEC
T ss_pred cccccCCEEEEEc----CCCCEeeEEEEEECCCCeEEEEEeC-Cc-------eEEEeHH----------------HcccC
Confidence 5799999999998 247999999999865 689999977 21 5788864 78998
Q ss_pred CCC
Q 044464 473 PPD 475 (686)
Q Consensus 473 PP~ 475 (686)
|..
T Consensus 57 ~~~ 59 (67)
T 3p8d_A 57 SKD 59 (67)
T ss_dssp C--
T ss_pred Ccc
Confidence 763
No 38
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=95.22 E-value=0.051 Score=47.95 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=42.2
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee----CCeEEEEeCcccCCCCCCcceEEEecccc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS----QKQMKVRYDDVQDEDGSGNLEEWIPVYKV 453 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~----~~ky~VeY~dL~deDgs~~L~EwV~~sr~ 453 (686)
...|.+|++|-|.. .|.|+.|+||++. ...|+|-|..+- ..|-|||+.+|+
T Consensus 21 ~~~~~vG~kv~v~~-----~~~~y~AkIl~ir~~~~~~~YyVHY~g~N-----kRlDEWV~~~rl 75 (92)
T 2ro0_A 21 VDDIIIKCQCWVQK-----NDEERLAEILSINTRKAPPKFYVHYVNYN-----KRLDEWITTDRI 75 (92)
T ss_dssp TTSCCTTCEEEEEE-----TTEEEEEEEEEEECSSSSCEEEEEETTSC-----TTSCEEEEGGGE
T ss_pred cccccCCCEEEEEE-----CCEEEEEEEEEEEEcCCCcEEEEEeCCcC-----cccccccCHhHc
Confidence 35799999999985 5799999999975 257999999983 368899998765
No 39
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=95.15 E-value=0.044 Score=47.86 Aligned_cols=52 Identities=19% Similarity=0.298 Sum_probs=43.9
Q ss_pred CCCcCCCCEEEEeeCC-CeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 479 DLSLGIGTAVDAWWSD-GWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D-GWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
...|.+|+.|-|-|.| .|.+|.|+.+. ++..|.|.|.+ +...++...+|||-
T Consensus 19 ~~~f~vGd~VlArW~D~~yYPAkI~sV~--~~~~YtV~F~D-G~~etvk~~~IKp~ 71 (85)
T 3qii_A 19 SSEFQINEQVLACWSDCRFYPAKVTAVN--KDGTYTVKFYD-GVVQTVKHIHVKAF 71 (85)
T ss_dssp --CCCTTCEEEEECTTSCEEEEEEEEEC--TTSEEEEEETT-SCEEEEEGGGEEEC
T ss_pred CcccccCCEEEEEeCCCCEeeEEEEEEC--CCCeEEEEEeC-CCeEEecHHHcccC
Confidence 4679999999996655 79999999996 56799999998 88888999999883
No 40
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=94.92 E-value=0.062 Score=45.00 Aligned_cols=50 Identities=20% Similarity=0.320 Sum_probs=43.7
Q ss_pred CcCCCCEEEEeeCC-CeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 481 SLGIGTAVDAWWSD-GWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 481 ~~~vGD~VDAw~~D-GWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
.|++||.|=|-|.| .|.+|+|+.+. ++..|.|.|.+ +...++...+|||.
T Consensus 6 ~~~vGd~vmArW~D~~yYpA~I~si~--~~~~Y~V~F~d-G~~etvk~~~ikp~ 56 (67)
T 3p8d_A 6 EFQINEQVLACWSDCRFYPAKVTAVN--KDGTYTVKFYD-GVVQTVKHIHVKAF 56 (67)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEEC--TTSEEEEEETT-SCEEEEEGGGEEEC
T ss_pred ccccCCEEEEEcCCCCEeeEEEEEEC--CCCeEEEEEeC-CceEEEeHHHcccC
Confidence 59999999996655 79999999996 55789999998 88889999999984
No 41
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=93.85 E-value=0.0048 Score=53.41 Aligned_cols=46 Identities=11% Similarity=0.187 Sum_probs=36.1
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEee-CCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVS-QKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~-~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
..|++|+.|-.+.. -|.||+|+|.++. ..+|.|.|.+ -+ .|.|+++
T Consensus 5 ~~~kvGd~clAkws----Dg~wY~A~I~~v~~~~~y~V~F~D-Gn-------~E~V~~s 51 (81)
T 2ldm_A 5 SEFQINEQVLASWS----DSRFYPAKVTAVNKDGTYTVKFYD-GV-------VQTVKHI 51 (81)
Confidence 46899999999865 3689999999985 4689999987 32 4677764
No 42
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=94.81 E-value=0.49 Score=50.00 Aligned_cols=115 Identities=15% Similarity=0.197 Sum_probs=74.5
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccc---------------cCCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKV---------------AKPD 457 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~---------------a~pd 457 (686)
...|++|.++||.... --..+..|||+++.+.+++|+|+.+.+. ..=|+.+... ..|.
T Consensus 34 ~~~F~~GMKLE~~D~~--~~~~~~vAtV~~v~G~rl~l~~dg~~~~-----~dFW~~~~S~~IhPvGwc~~~g~~L~pP~ 106 (324)
T 3ut1_A 34 KNGFKVGMKLEGVDPE--HQSVYCVLTVAEVCGYRIKLHFDGYSDC-----YDFWVNADALDIHPVGWCEKTGHKLHPPK 106 (324)
T ss_dssp CCCCCTTCEEEEEETT--EEEEEEEEEEEEEETTEEEEEETTSCGG-----GCEEEETTCSSEECTTHHHHHTCCEECCT
T ss_pred CCcccCCCEEEEecCC--CCCcEEEEEEEEEECCEEEEEECCCCCC-----CCEEEeCCCCCeeccchhHhcCeeccCCC
Confidence 4679999999998543 2368999999999999999999987431 2357765311 1111
Q ss_pred ccCCCCCC--------CCCcCCCCCCC-------CCCCCcCCCCEEEEeeCC---CeeEEEEEEEecCCCCeEEEEECCc
Q 044464 458 KLGMRCSD--------RPTIRPTPPDN-------REDLSLGIGTAVDAWWSD---GWWEGVVIGVDSSSTDNLQVYLSGE 519 (686)
Q Consensus 458 ~~g~R~~~--------R~~IRP~PP~~-------~~~~~~~vGD~VDAw~~D---GWWeGVV~kv~~~g~~ky~VyFpGe 519 (686)
|.+... ...-+++|... .....|++|..+||-.-- -.+.++|++|. +.++.|.|.|.
T Consensus 107 --g~~~~~f~W~~yL~~~~a~~aP~~lF~~~~~~~~~~~F~vGMKLEavDp~~p~~icvATV~~V~---g~~l~v~~Dg~ 181 (324)
T 3ut1_A 107 --GYKEEEFNWQTYLKTCKAQAAPKSLFENQNITVIPSGFRVGMKLEAVDKKNPSFICVATVTDMV---DNRFLVHFDNW 181 (324)
T ss_dssp --TCCTTTCCHHHHHHHTTCCBCCGGGCTTTTCCCCCCSCCTTCEEEEEETTEEEEEEEEEEEEEE---TTEEEEEETTS
T ss_pred --CCcCCCCCHHHHHHHhCcccCChHHcccCCCccCccccccCCEEEEecCCCCCcEEEEEEEEEE---CCEEEEEECCC
Confidence 111000 00011222210 112569999999997543 58999999996 56899999874
No 43
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=94.74 E-value=0.07 Score=47.37 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=42.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee----CCeEEEEeCcccCCCCCCcceEEEecccc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS----QKQMKVRYDDVQDEDGSGNLEEWIPVYKV 453 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~----~~ky~VeY~dL~deDgs~~L~EwV~~sr~ 453 (686)
...|.+|++|-|.. .|.|+.|+||++. ...|+|-|..+- ..|-|||+.+|+
T Consensus 23 ~~~~~vG~kv~v~~-----~~~~yeAeIl~ir~~~g~~~YYVHY~g~N-----kRlDEWV~~~RI 77 (94)
T 2rnz_A 23 VDDIIIKCQCWVQK-----NDEERLAEILSINTRKAPPKFYVHYVNYN-----KRLDEWITTDRI 77 (94)
T ss_dssp GGGCCTTEEEEEEC-----SSCEEEEEEEEEECSSSSCEEEEECTTSC-----STTCEEEETTTB
T ss_pred cccccCCCEEEEEE-----CCEEEEEEEEEEEEcCCCcEEEEEeCCcC-----cccccccCHHHc
Confidence 35799999999985 5799999999975 257999999982 468899998764
No 44
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.69 E-value=0.078 Score=44.99 Aligned_cols=60 Identities=12% Similarity=0.364 Sum_probs=46.2
Q ss_pred CCcCCCCEEEEee-CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcceee-ecCCcee
Q 044464 480 LSLGIGTAVDAWW-SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRISRD-WAGDQWV 542 (686)
Q Consensus 480 ~~~~vGD~VDAw~-~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRpsld-W~dG~Wv 542 (686)
..|++||.|=|-| ++.|..|+|.++. +.+.|.|.|.+- ..-++..++|||--. +.+..|.
T Consensus 8 ~~~kvGd~clA~wsDg~~Y~A~I~~v~--~~~~~~V~f~Dy-n~e~v~~~~lrplp~~~k~~~~~ 69 (74)
T 2equ_A 8 FDFKAGEEVLARWTDCRYYPAKIEAIN--KEGTFTVQFYDG-VIRCLKRMHIKAMPEDAKGQDWI 69 (74)
T ss_dssp CCCCTTCEEEEECSSSSEEEEEEEEES--TTSSEEEEETTS-CEEEECGGGEECCCGGGTCCCCT
T ss_pred CCCCCCCEEEEECCCCCEEEEEEEEEC--CCCEEEEEEecC-CeEEecHHHCeeCChhHhhchHH
Confidence 5699999999977 5689999999995 347899999865 667788889987543 3344444
No 45
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=94.65 E-value=0.097 Score=45.72 Aligned_cols=53 Identities=17% Similarity=0.230 Sum_probs=44.9
Q ss_pred CCcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 480 LSLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 480 ~~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
..|++|+.+=|-| ++.|..++|..+. ...+.|.|+|.+=|..-++..++|||-
T Consensus 9 ~~~kvGd~C~A~ys~Dg~wYrA~I~~i~-~~~~~~~V~fiDYGN~E~V~~~~Lrp~ 63 (88)
T 1g5v_A 9 QQWKVGDKCSAIWSEDGCIYPATIASID-FKRETCVVVYTGYGNREEQNLSDLLSP 63 (88)
T ss_dssp CCCCSSCEEEEECTTTCCEEEEEEEEEE-TTTTEEEEEETTTCCEEEEEGGGCBCC
T ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEec-CCCCEEEEEEecCCCEEEEcHHHcccC
Confidence 3599999999987 6789999999996 335899999998777777889999983
No 46
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=94.65 E-value=0.026 Score=50.13 Aligned_cols=47 Identities=19% Similarity=0.346 Sum_probs=37.9
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEeeC-CeEEEEeCcccCCCCCCcceEEEecc
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-KQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
.+++|+.+-+...++ |.||||+|+++.. +++.|.|-|+-+ .|.|+.+
T Consensus 32 ~~~~G~~c~a~~~~d---~~wyRA~V~~~~~~~~~~V~fvDyGn-------~e~v~~~ 79 (110)
T 2diq_A 32 TVHVGDIVAAPLPTN---GSWYRARVLGTLENGNLDLYFVDFGD-------NGDCPLK 79 (110)
T ss_dssp CCCTTCEEEECCTTT---CSCEEEEECCCCSSSCEEEEETTTCC-------EEEECGG
T ss_pred CCCCCCEEEEEECCC---CeEEEEEEEEECCCCeEEEEEEeCCC-------eEEEehH
Confidence 568999998876544 5899999999864 789999999843 5788865
No 47
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=94.62 E-value=0.32 Score=52.93 Aligned_cols=111 Identities=23% Similarity=0.315 Sum_probs=76.9
Q ss_pred ccccCCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCC
Q 044464 391 WYSAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPT 468 (686)
Q Consensus 391 ~~~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~ 468 (686)
..++..++|+.|-.+..-..-.+.|.-|+|++.. .++|.|+=.+- ++++.....=.++ |..
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~y~v~d~~~-~~~~~~~~~~~~~----------------~~~ 445 (522)
T 3mp6_A 383 NPNAPILVGSEVAYKPRRGSADGEWIQCEVLKVVADGTRFEVRDPEP-DELGNSGKVYKCN----------------RKE 445 (522)
T ss_dssp SCCCCBCTTCEEEECCC-----CCEEEEEEEEEETTTTEEEEEECSC-BTTBTTCEEEEEC----------------GGG
T ss_pred ccccccCCCCEEEEecCCCCCCCCEEEEEEEEEeCCCCEEEEeCCCC-CCCCCCCeeEEcc----------------HHH
Confidence 3467899999999985544445899999999975 57899885542 1222111122233 347
Q ss_pred cCCCCCCCCCCCCcCCCCEEEEeeCC--CeeEEEEEEEecCCCCeEEEEECCcce
Q 044464 469 IRPTPPDNREDLSLGIGTAVDAWWSD--GWWEGVVIGVDSSSTDNLQVYLSGESL 521 (686)
Q Consensus 469 IRP~PP~~~~~~~~~vGD~VDAw~~D--GWWeGVV~kv~~~g~~ky~VyFpGe~d 521 (686)
|-|.||... ...|..|+.|=|.|-+ +...++|.+.. ..+.|.|.|.|+.+
T Consensus 446 ~~~~p~~~~-~~~~~~~~~v~a~~p~tt~fy~a~v~~~~--~~~~~~~~f~~~~~ 497 (522)
T 3mp6_A 446 LLLIPPGFP-TKNYPPGTKVLARYPETTTFYPAIVIGTK--RDGTCRLRFDGEEE 497 (522)
T ss_dssp EEEECSSCC-CCCCCTTCEEEEECTTCSEEEEEEEEEEC--TTSCEEEEETTC--
T ss_pred EEECCCCCc-ccCCCCCCEEEEECCCCcceEeEEEecCC--CCCeEEEEecCCCC
Confidence 889987433 4679999999999988 99999999974 45689999998754
No 48
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=94.47 E-value=0.57 Score=49.53 Aligned_cols=117 Identities=16% Similarity=0.162 Sum_probs=75.6
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccc---------------cCCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKV---------------AKPD 457 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~---------------a~pd 457 (686)
...|++|.++|+.-...- ..+..|||+++.+.+++|+|+...+. ...|+.+... ..|.
T Consensus 146 ~~~F~vGmKLEavD~~np--~~icvATV~~v~g~r~~v~~Dg~~~~-----~D~w~~~~S~~I~PVGwc~~~g~~L~pP~ 218 (331)
T 1oz2_A 146 PLGFQVGMKLEAVDRMNP--SLVCVASVTDVVDSRFLVHFDNWDDT-----YDYWCDPSSPYIHPVGWCQKQGKPLTPPQ 218 (331)
T ss_dssp CTTCCTTCEEEEECTTST--TCEEEEEEEEEETTEEEEEETTSCGG-----GCEEECTTCTTEECTTHHHHHTCCEECST
T ss_pred ccccccccEEEeccCCCC--CcEEEEEEEEeeCCEEEEEeCCCCCc-----cCEEEecCCCCccCCchHHhcCCCCCCCC
Confidence 457999999999855443 57999999999999999999987431 2467765310 0110
Q ss_pred ccCCCCCC---------CCCcCCCCCCC---CCCCCcCCCCEEEEeeC---CCeeEEEEEEEecCCCCeEEEEECCcce
Q 044464 458 KLGMRCSD---------RPTIRPTPPDN---REDLSLGIGTAVDAWWS---DGWWEGVVIGVDSSSTDNLQVYLSGESL 521 (686)
Q Consensus 458 ~~g~R~~~---------R~~IRP~PP~~---~~~~~~~vGD~VDAw~~---DGWWeGVV~kv~~~g~~ky~VyFpGe~d 521 (686)
|.+... ...-.|+|... .....|++|..+||-.. .-.+.++|++|. +.++.|.|.|-..
T Consensus 219 --gy~~~~~f~W~~yL~~~ga~~aP~~~F~~~~~~~F~~gmKLEavD~~~p~~ic~AtV~~v~---~~~l~v~fDgw~~ 292 (331)
T 1oz2_A 219 --DYPDPDNFCWEKYLEETGASAVPTWAFKVRPPHSFLVNMKLEAVDRRNPALIRVASVEDVE---DHRIKIHFDGWSH 292 (331)
T ss_dssp --TCSSGGGCCHHHHHHHHTCCBCCGGGCCCCCCCCCCTTCEEEEECSSSTTCEEEEEEEEEC---SSEEEEEETTBCG
T ss_pred --CCCcCCcccHHHHHHhcCCCcCCHHHcccccccccccCceeEeecccCCCcEEeeEEEEEc---CCEEEEEeCCCCC
Confidence 110000 00011222210 11356999999988654 358999999995 6789999998543
No 49
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=94.44 E-value=0.12 Score=43.77 Aligned_cols=53 Identities=13% Similarity=0.105 Sum_probs=45.6
Q ss_pred CCcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 480 LSLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 480 ~~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
..|++|+.|=|-+ ++.|.-++|+++. .....+.|+|-+=+..-++..++|||-
T Consensus 8 ~~~~~G~~c~A~~s~Dg~wYRA~I~~i~-~~~~~~~V~fiDYGN~e~V~~~~Lr~l 62 (78)
T 2d9t_A 8 KVWKPGDECFALYWEDNKFYRAEVEALH-SSGMTAVVKFTDYGNYEEVLLSNIKPV 62 (78)
T ss_dssp CCCCTTCEEEEECTTTCCEEEEEEEEEC-SSSSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred cCCCcCCEEEEEECCCCCEEEEEEEEEe-CCCCEEEEEEEcCCCeEEEcHHHeEeC
Confidence 5689999999988 6789999999985 235899999998888888999999975
No 50
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=94.18 E-value=0.53 Score=51.61 Aligned_cols=116 Identities=14% Similarity=0.152 Sum_probs=72.7
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccc---------------cCCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKV---------------AKPD 457 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~---------------a~pd 457 (686)
...|++|.++||..... -.....|+|+++.+.+++++|....+. +. .=|+..... ..|+
T Consensus 153 ~~~F~~GmkLEv~d~~~--~~~~~vAtV~~v~G~rl~Lry~g~~d~--~~--dFW~~~~S~~IhPvGWc~~~g~~L~pP~ 226 (437)
T 3feo_A 153 QYPFKPCMRVEVVDKRH--LCRTRVAVVESVIGGRLRLVYEESEDR--TD--DFWCHMHSPLIHHIGWSRSIGHRFKRSD 226 (437)
T ss_dssp CCSCCTTEEEEEEETTE--EEEEEEEEEEEEETTEEEEEESSCSST--TC--EEEEETTCTTEECTTHHHHHTCCBC---
T ss_pred CCCCCCCCEEEEecCCC--CcceEEEEEEEEECCEEEEEEeCCCCC--CC--CeEEeCCCCCccccchHHhcCCcccCch
Confidence 35699999999985443 345667999999999999999987432 11 347665310 1111
Q ss_pred ccCCCCCCCCCcCCCCCCC--------CCCCCcCCCCEEEEeeC---CCeeEEEEEEEecCCCCeEEEEECCcc
Q 044464 458 KLGMRCSDRPTIRPTPPDN--------REDLSLGIGTAVDAWWS---DGWWEGVVIGVDSSSTDNLQVYLSGES 520 (686)
Q Consensus 458 ~~g~R~~~R~~IRP~PP~~--------~~~~~~~vGD~VDAw~~---DGWWeGVV~kv~~~g~~ky~VyFpGe~ 520 (686)
.. .+..+ -+++|+.. .....|++|..+||-.- ..-|.++|+++. +++++.|.|.|..
T Consensus 227 ~~-~~~~g---a~~aP~~lF~~~~~~~~~~~~F~~GMKLEavDp~~p~~icvATV~~v~--~~g~l~l~~Dg~~ 294 (437)
T 3feo_A 227 IT-KKQDG---HFDTPPHLFAKVKEVDQSGEWFKEGMKLEAIDPLNLSTICVATIRKVL--ADGFLMIGIDGSE 294 (437)
T ss_dssp -------C---CEECCGGGSCCCCCCCCSSSCCCTTCEEEEEETTEEEEEEEEEEEEEC--GGGEEEEEETTCC
T ss_pred hh-hhccc---ccCCCHHHhccccccCCCccccccCCEEEEEcCCCCceEEEEEEEEEc--cCCEEEEEeCCCC
Confidence 00 00000 11223311 11234999998888644 479999999985 5678889999854
No 51
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=94.09 E-value=0.49 Score=52.16 Aligned_cols=119 Identities=16% Similarity=0.198 Sum_probs=76.7
Q ss_pred cCCCCCCEEEEEecCCcce-eeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccc---------------cCCC
Q 044464 394 AMYKVNAKIELLCQDSGIR-GCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKV---------------AKPD 457 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfr-GsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~---------------a~pd 457 (686)
..|++|.++||.-.+.... .++.-|+|+++.+.+++++|+.+.+++.. .=|+.+... ..|.
T Consensus 39 ~~~~~GmklEv~d~~~~~~~~~~WvAtV~~~~G~rL~Lry~G~~~d~~~---DFW~~~~s~~ihPvGWc~~~g~~L~PP~ 115 (456)
T 3f70_A 39 EDVMKGMKVEVLNSDAVLPSRVYWIASVIQTAGYRVLLRYEGFENDASH---DFWCNLGTVDVHPIGWCAINSKILVPPR 115 (456)
T ss_dssp GGCCTTCEEEEECCSCCC--CCEEEEEEEEEETTEEEEEETTCTTCCTT---CEEEETTSTTEECTTHHHHTTCCBCCCT
T ss_pred ccccCCCEEEEecCCCCCCccceEEEEEeeecceeEEEEecccCCCCcC---CcceeCCCCceeecccHHhcCcEecCCc
Confidence 4699999999997655432 57788999999999999999998644322 358776311 1111
Q ss_pred ccCCCCCCC----------CCcCCCCCCC------CCCCCcCCCCEEEEeeCC---CeeEEEEEEEecCCCCeEEEEECC
Q 044464 458 KLGMRCSDR----------PTIRPTPPDN------REDLSLGIGTAVDAWWSD---GWWEGVVIGVDSSSTDNLQVYLSG 518 (686)
Q Consensus 458 ~~g~R~~~R----------~~IRP~PP~~------~~~~~~~vGD~VDAw~~D---GWWeGVV~kv~~~g~~ky~VyFpG 518 (686)
++|..-. .--++.|+.. .....|++|..|||-... .-|..+|.++. ++++.|.|.|
T Consensus 116 --~i~~~~~~W~~~L~k~l~ga~~~P~~f~~~~~~~~~~~F~~GmkLE~vD~~~~~~~~vAtV~~v~---g~rl~l~~~~ 190 (456)
T 3f70_A 116 --TIHAKFTDWKGYLMKRLVGSRTLPVDFHIKMVESMKYPFRQGMRLEVVDKSQVSRTRMAVVDTVI---GGRLRLLYED 190 (456)
T ss_dssp --TTGGGCSCHHHHHHHHHTTCCBCCTTHHHHHHHHTSCSSCTTCEEEEECTTCTTCEEEEEEEEEE---TTEEEEEECC
T ss_pred --ccccCcccHHHHHHHHhccCccCCHHHhhccccccCCCCCCCCEEEEECCCCCcceEEEEEEEEE---CCEEEEEEcC
Confidence 1110000 0012333321 123579999999997554 68999999985 6889988886
Q ss_pred cc
Q 044464 519 ES 520 (686)
Q Consensus 519 e~ 520 (686)
..
T Consensus 191 ~~ 192 (456)
T 3f70_A 191 GD 192 (456)
T ss_dssp --
T ss_pred CC
Confidence 43
No 52
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=94.02 E-value=0.12 Score=43.84 Aligned_cols=53 Identities=13% Similarity=0.077 Sum_probs=44.9
Q ss_pred CCcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 480 LSLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 480 ~~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
..|++|+.+=|-+ ++.|..++|+++. ..++.+.|+|-+=|..-.+..++|||-
T Consensus 16 ~~~kvGd~C~A~ys~Dg~wYRA~I~~i~-~~~~~~~V~fvDYGN~e~V~~~~Lr~l 70 (77)
T 3pnw_C 16 KMWKPGDECFALYWEDNKFYRAEVEALH-SSGMTAVVKFIDYGNYEEVLLSNIKPI 70 (77)
T ss_dssp TTCCTTCEEEEEETTTTEEEEEEEEEEC-TTSSEEEEEETTTCCEEEEEGGGEECC
T ss_pred CCCCcCCEEEEEECCCCCEEEEEEEEEe-CCCCEEEEEEEcCCCeEEEeHHHeEEC
Confidence 5699999999988 5679999999995 345789999998777888899999973
No 53
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=93.57 E-value=0.17 Score=43.59 Aligned_cols=51 Identities=25% Similarity=0.392 Sum_probs=45.2
Q ss_pred CCcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcc
Q 044464 480 LSLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRI 532 (686)
Q Consensus 480 ~~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRp 532 (686)
..+++|+.+=|.+ ++.|.-++|+++. +++.+.|+|-+-|....+..++||+
T Consensus 26 ~~~~~G~~c~a~~~~d~~wyRA~I~~~~--~~~~~~V~fvDyGn~e~v~~~~lr~ 78 (94)
T 3fdr_A 26 LTVHVGDIVAAPLPTNGSWYRARVLGTL--ENGNLDLYFVDFGDNGDCPLKDLRA 78 (94)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEEC--TTSCEEEEETTTCCEEEECGGGCEE
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEEC--CCCeEEEEEEcCCCeEEEEHHHhhh
Confidence 5688999999977 8899999999985 4578999999989999999999996
No 54
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=93.57 E-value=0.16 Score=47.37 Aligned_cols=52 Identities=15% Similarity=0.329 Sum_probs=41.4
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeC------CeEEEEeCcccCCCCCCcceEEEecccc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ------KQMKVRYDDVQDEDGSGNLEEWIPVYKV 453 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~------~ky~VeY~dL~deDgs~~L~EwV~~sr~ 453 (686)
...|.+|++|-|+-. .|.||.|+||++.. ..|+|-|..+- ..|-|||+..|+
T Consensus 10 ~~~~~vGe~v~~~~~----d~~~y~AkIl~i~~~~~~~~~~YyVHY~gwN-----kR~DEWV~~~ri 67 (133)
T 1wgs_A 10 EVTVEIGETYLCRRP----DSTWHSAEVIQSRVNDQEGREEFYVHYVGFN-----RRLDEWVDKNRL 67 (133)
T ss_dssp CCCCCTTSEEEEEET----TTEEEEEEEEEEEEETTTTEEEEEEECTTTC-----SSCCEEECTTTS
T ss_pred ccccCCCCEEEEEeC----CCCEEEEEEEEEEeccCCCceEEEEeccCcC-----CCceeecChhhc
Confidence 457999999999863 36999999999641 37999999873 357899998754
No 55
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=93.09 E-value=0.2 Score=44.99 Aligned_cols=59 Identities=10% Similarity=0.163 Sum_probs=45.6
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeC---------CeEEEEeCcccCCCCCCcceEEEecccccCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ---------KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKP 456 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~---------~ky~VeY~dL~deDgs~~L~EwV~~sr~a~p 456 (686)
.+.|.+|++|-+.-.+.+-.+.||.|+|+++.. ..|+|-|...- ....|||+.+|+...
T Consensus 17 ~~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn-----~rwDEWV~edRilk~ 84 (101)
T 3m9q_A 17 TPLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWR-----PSYDRAVRATVLLKD 84 (101)
T ss_dssp CCCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSC-----GGGCEEECGGGEEEC
T ss_pred CCcccCCCEEEEEecCCCCCCcceEeEEEEEEecCCccccCceEEEEEeCCCC-----cCceeecCHHHcccC
Confidence 468999999999877766778999999999742 26999997653 246699998765433
No 56
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=92.21 E-value=0.017 Score=50.01 Aligned_cols=51 Identities=16% Similarity=0.247 Sum_probs=44.1
Q ss_pred CCcCCCCEEEEee-CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 480 LSLGIGTAVDAWW-SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 480 ~~~~vGD~VDAw~-~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
..|++||.|=|-| ++.|..++|+.+. +++.|.|.|.+ +...++..++|||-
T Consensus 5 ~~~kvGd~clAkwsDg~wY~A~I~~v~--~~~~y~V~F~D-Gn~E~V~~s~LrPl 56 (81)
T 2ldm_A 5 SEFQINEQVLASWSDSRFYPAKVTAVN--KDGTYTVKFYD-GVVQTVKHIHVKAF 56 (81)
Confidence 4699999999955 6699999999995 45689999988 88888999999987
No 57
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=91.94 E-value=0.02 Score=49.76 Aligned_cols=54 Identities=17% Similarity=0.345 Sum_probs=42.7
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee----CCeEEEEeCcccCCCCCCcceEEEecccccCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS----QKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKP 456 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~----~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~p 456 (686)
.+.|.+|++|.|.- .+.|+.|+||++. ...|+|-|..+- ..+-|||+..|+.+.
T Consensus 10 ~~~~~~Gekv~~~~-----~~~~y~AkIl~i~~~~~~~~YyVHY~GwN-----kR~DEWV~~~Rl~k~ 67 (85)
T 2lrq_A 10 NTLFVDGERVLCFH-----GPLIYEAKVLKTKPDATPVEYYIHYAGWS-----KNWDEWVPENRVLKY 67 (85)
Confidence 46899999999986 3589999999974 357999999873 357899998755433
No 58
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=92.66 E-value=1.7 Score=47.66 Aligned_cols=118 Identities=15% Similarity=0.235 Sum_probs=76.3
Q ss_pred cCCCCCCEEEEEecCCcc-eeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccccCCCccCC-CCCCCCCcCC
Q 044464 394 AMYKVNAKIELLCQDSGI-RGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGM-RCSDRPTIRP 471 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGf-rGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~-R~~~R~~IRP 471 (686)
..|++|.+|||...+... ..++--|+|+++.+.+++++|..+.++... .=|+.+... .-...|. ...+ ..++|
T Consensus 41 ~~~~~GmklEv~~~~~~~~~~~yWvA~V~~~~G~rllLry~G~~~d~~~---DFW~~~~s~-~ihpvGwc~~~~-~~l~P 115 (437)
T 3feo_A 41 GDISENVRVEVPNTDCSLPTKVFWIAGIVKLAGYNALLRYEGFENDSGL---DFWCNICGS-DIHPVGWCAASG-KPLVP 115 (437)
T ss_dssp TTCCTTCEEEEECSCC----CCEEEEEEEEEETTEEEEEETTCTTCCTT---CEEEETTST-TCEETTHHHHHT-CCBCC
T ss_pred cccCCCCEEEEecCCCCCCcCceEEEEEeeecceEEEEEecccCCCCCC---CcceeCCCc-cccccccHhhcC-CEecC
Confidence 579999999999665543 256778999999999999999998654332 358876411 0000111 0001 12222
Q ss_pred ------------------------CCCCC------CCCCCcCCCCEEEEeeCC---CeeEEEEEEEecCCCCeEEEEECC
Q 044464 472 ------------------------TPPDN------REDLSLGIGTAVDAWWSD---GWWEGVVIGVDSSSTDNLQVYLSG 518 (686)
Q Consensus 472 ------------------------~PP~~------~~~~~~~vGD~VDAw~~D---GWWeGVV~kv~~~g~~ky~VyFpG 518 (686)
.|+.. .....|++|..||+-... ..|...|+++. +.++.+.|.|
T Consensus 116 P~~i~~~~~~W~~yL~~~ltga~t~P~~~f~~~~~~~~~~F~~GmkLEv~d~~~~~~~~vAtV~~v~---G~rl~Lry~g 192 (437)
T 3feo_A 116 PRTIQHKYTNWKAFLVKRLTGAKTLPPDFSQKVSESMQYPFKPCMRVEVVDKRHLCRTRVAVVESVI---GGRLRLVYEE 192 (437)
T ss_dssp CGGGTTTCSCHHHHHHHHHTTCCCCCTTHHHHHHHHTCCSCCTTEEEEEEETTEEEEEEEEEEEEEE---TTEEEEEESS
T ss_pred CcccccccccHHHHHHHHhhcCccCChhHhhccccccCCCCCCCCEEEEecCCCCcceEEEEEEEEE---CCEEEEEEeC
Confidence 22210 113469999999997654 69999999986 6888888877
Q ss_pred c
Q 044464 519 E 519 (686)
Q Consensus 519 e 519 (686)
.
T Consensus 193 ~ 193 (437)
T 3feo_A 193 S 193 (437)
T ss_dssp C
T ss_pred C
Confidence 4
No 59
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=92.50 E-value=0.51 Score=41.11 Aligned_cols=51 Identities=18% Similarity=0.372 Sum_probs=38.9
Q ss_pred CcCCCCCCCCCCCCcCCCCEEEEee-CCCeeEEEEEEEecCCCCeEEEEECCcc
Q 044464 468 TIRPTPPDNREDLSLGIGTAVDAWW-SDGWWEGVVIGVDSSSTDNLQVYLSGES 520 (686)
Q Consensus 468 ~IRP~PP~~~~~~~~~vGD~VDAw~-~DGWWeGVV~kv~~~g~~ky~VyFpGe~ 520 (686)
...+.||.. ....|++|+.|||.. .+-|.+++|+.+. ..+.+|.|.|.|-.
T Consensus 7 ~~~~~~~~~-~~~~F~vGmkLEA~D~~~~~~~a~i~~v~-~~~~~v~VHfdGW~ 58 (88)
T 2eqm_A 7 GMSKKPPNR-PGITFEIGARLEALDYLQKWYPSRIEKID-YEEGKMLVHFERWS 58 (88)
T ss_dssp SCTTSCCSC-SSCCCCSSCEEEEECTTSCEEEEEEEEEE-TTTTEEEEEESSST
T ss_pred CcccCCCCC-CcCcCCCCCEEEEEcCCCCeeEEEEEEEe-ccCCEEEEEECCCC
Confidence 344555542 246799999999988 4679999999986 45779999999844
No 60
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=92.27 E-value=0.27 Score=47.34 Aligned_cols=47 Identities=21% Similarity=0.265 Sum_probs=38.6
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
..++|+.+-+...++ |.||||+|+++.++.+.|.|.|+-+ .|.|+.+
T Consensus 51 ~~~~g~~c~a~~~~d---~~wyRa~V~~v~~~~~~V~~vDyG~-------~~~v~~~ 97 (218)
T 2wac_A 51 TPKRGDLVAAQFTLD---NQWYRAKVERVQGSNATVLYIDYGN-------KETLPTN 97 (218)
T ss_dssp CCCTTCEEEEECTTT---CCEEEEEEEEEETTEEEEEETTTCC-------EEEEEGG
T ss_pred cCCcCCEEEEEECCC---CeEEEEEEEEecCCeEEEEEEecCC-------eEEEchH
Confidence 367999999986544 6899999999988999999999743 5778865
No 61
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=91.71 E-value=6.7 Score=39.39 Aligned_cols=110 Identities=19% Similarity=0.367 Sum_probs=69.3
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEe----eCCeEEEEeCcccCCCCCCcceEEEecccc---cCCCcc---CCCC-
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQV----SQKQMKVRYDDVQDEDGSGNLEEWIPVYKV---AKPDKL---GMRC- 463 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~----~~~ky~VeY~dL~deDgs~~L~EwV~~sr~---a~pd~~---g~R~- 463 (686)
.+-+|++|=....+.+ +-+.|++.|... ++.+|+|-|+|= ...+|....+ -.|.+. -+..
T Consensus 68 ~l~vG~RVVA~~~~~~-~~~fY~GiVaE~p~~~N~~RyLVFFDDG--------~~~Yv~~~~V~~Vc~~s~~vW~di~~~ 138 (213)
T 3dlm_A 68 KLYVGSRVVAKYKDGN-QVWLYAGIVAETPNVKNKLRFLIFFDDG--------YASYVTQSELYPICRPLKKTWEDIEDI 138 (213)
T ss_dssp GCCTTCEEEEEEECSS-CEEEEEEEEEECCCTTTTSCEEEEETTS--------CEEEECGGGEEEBSSCCSSGGGGCSCH
T ss_pred EEeEEEEEEEEecCCC-CcceeeeEEEECCccCCCceEEEEEeCC--------CcceecCceEEEEEEcccchhhhcCcc
Confidence 5789999999987653 335556666554 346899988762 1244443221 011110 0000
Q ss_pred CCCCCcC------CCCCCCCCCCCcCCCCEEEEeeCCCeeEEEEEEEecCCCCeEEEEECCcc
Q 044464 464 SDRPTIR------PTPPDNREDLSLGIGTAVDAWWSDGWWEGVVIGVDSSSTDNLQVYLSGES 520 (686)
Q Consensus 464 ~~R~~IR------P~PP~~~~~~~~~vGD~VDAw~~DGWWeGVV~kv~~~g~~ky~VyFpGe~ 520 (686)
+.|.+|+ |-+|- ..+++|+.+-+=++|-||-++|.++. ..-++|+|++.+
T Consensus 139 ~~r~FIk~YL~~yP~rpm----v~~~~GQ~i~~E~~g~w~~~~V~~vD---~SLv~v~f~~dk 194 (213)
T 3dlm_A 139 SCRDFIEEYVTAYPNRPM----VLLKSGQLIKTEWEGTWWKSRVEEVD---GSLVRILFLDDK 194 (213)
T ss_dssp HHHHHHHHHHHHTTCCCC----CCCCTTCEEEEEETTEEEEEEEEEEE---TTEEEEEETTTT
T ss_pred hhHHHHHHHHHhCCCCce----EEcCCCCEEEEEecCcEEEEEEEEEc---ceeEEEEEcCCC
Confidence 0122232 54442 45889999999999999999999995 678999999653
No 62
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=91.46 E-value=0.4 Score=46.42 Aligned_cols=47 Identities=17% Similarity=0.328 Sum_probs=37.5
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEee-CCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVS-QKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~-~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
..++|+.+=+...++ |.||||+|+++. .+.+.|.|-|+-+ .|+|+.+
T Consensus 65 ~~~~G~~c~a~~~~d---~~wyRa~V~~~~~~~~~~V~~vDyG~-------~~~v~~~ 112 (201)
T 4b9w_A 65 KAEIGRPCCAFFSGD---GNWYRALVKEILPSGNVKVHFVDYGN-------VEEVTTD 112 (201)
T ss_dssp CCCTTCEEEEEETTT---TEEEEEEEEEECTTSCEEEEETTTCC-------EEEECGG
T ss_pred CCCCCCEEEEEECCC---CeEEEEEEEEECCCCeEEEEEEccCC-------EEEEEHH
Confidence 457899998887665 489999999974 5689999999843 5788865
No 63
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=91.25 E-value=3.7 Score=43.35 Aligned_cols=119 Identities=13% Similarity=0.182 Sum_probs=74.3
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccc-cCC------------Ccc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKV-AKP------------DKL 459 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~-a~p------------d~~ 459 (686)
...|++|.++|+.--.. -.....|||.++.+.++.|.|+...+ .-.-|+.+... .-| ...
T Consensus 141 ~~~F~vGMKLEavDp~~--p~~icvATV~~V~g~~l~v~~Dg~~~-----~~d~w~~~~Sp~I~PVGWCe~~g~~L~pP~ 213 (324)
T 3ut1_A 141 PSGFRVGMKLEAVDKKN--PSFICVATVTDMVDNRFLVHFDNWDE-----SYDYWCEASSPHIHPVGWCKEHRRTLITPP 213 (324)
T ss_dssp CCSCCTTCEEEEEETTE--EEEEEEEEEEEEETTEEEEEETTSCG-----GGCEEECTTCTTEECTTHHHHTTCCEECCT
T ss_pred ccccccCCEEEEecCCC--CCcEEEEEEEEEECCEEEEEECCCCC-----cCCEEEECCCCCcccCcHHHhcCCCCCCCC
Confidence 35799999999985544 35677999999999999999988732 12356665311 000 001
Q ss_pred CCCCCC---------CCCcCCCCCCC---CCCCCcCCCCEEEEe---eCCCeeEEEEEEEecCCCCeEEEEECCcce
Q 044464 460 GMRCSD---------RPTIRPTPPDN---REDLSLGIGTAVDAW---WSDGWWEGVVIGVDSSSTDNLQVYLSGESL 521 (686)
Q Consensus 460 g~R~~~---------R~~IRP~PP~~---~~~~~~~vGD~VDAw---~~DGWWeGVV~kv~~~g~~ky~VyFpGe~d 521 (686)
|.+..+ ...-.++|+.. .....|++|..+||- ...--+.++|+++. +.++.|.|.|-.+
T Consensus 214 gy~~~~~f~W~~YL~~t~a~aaP~~~F~~~~~~~F~~gmkLEAvD~~~p~licvATV~~v~---g~~l~v~fDgw~~ 287 (324)
T 3ut1_A 214 GYPNVKHFSWDKYLEETNSLPAPARAFKVKPPHGFQKKMKLEVVDKRNPMFIRVATVADTD---DHRVKVHFDGWNN 287 (324)
T ss_dssp TC--CCSCCHHHHHHHTTCCBCCGGGCCCCCCCCCCTTCEEEEECSSSTTCEEEEEEEEEC---SSEEEEEETTSCG
T ss_pred CCCCCCcccHHHHHHhhCCCCCCHHHhcccccccCCCCCeeeccCCCCCCceeEEEEEEec---CCEEEEEeCCCCC
Confidence 111000 00001222210 112469999999997 44468999999984 7899999998543
No 64
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=90.93 E-value=0.32 Score=43.00 Aligned_cols=52 Identities=25% Similarity=0.371 Sum_probs=45.2
Q ss_pred CCcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 480 LSLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 480 ~~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
..+++|+.|=|.+ ++.|.-++|+++. +++.+.|+|-+-|....+..++||+-
T Consensus 31 ~~~~~G~~c~a~~~~d~~wyRA~V~~~~--~~~~~~V~fvDyGn~e~v~~~~Lr~l 84 (110)
T 2diq_A 31 LTVHVGDIVAAPLPTNGSWYRARVLGTL--ENGNLDLYFVDFGDNGDCPLKDLRAL 84 (110)
T ss_dssp CCCCTTCEEEECCTTTCSCEEEEECCCC--SSSCEEEEETTTCCEEEECGGGCEEC
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEEC--CCCeEEEEEEeCCCeEEEehHHhhcC
Confidence 4578999999976 6899999999985 35789999999999999999999975
No 65
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=90.79 E-value=0.61 Score=42.17 Aligned_cols=52 Identities=15% Similarity=0.289 Sum_probs=41.3
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
...|++|.++|+.-...-. .+..|||+++.+.+++|.|+...+ ...+|+++.
T Consensus 11 ~~~F~~GMKLEAvD~~~p~--~icvATV~~v~g~rl~v~fDGw~~-----~~D~W~~~d 62 (107)
T 1wjq_A 11 PHGFQKKMKLEVVDKRNPM--FIRVATVADTDDHRVKVHFDGWNN-----CYDYWIDAD 62 (107)
T ss_dssp SSSCCSSCEEEEECTTCTT--CEEEEEEEEECSSCEEEECSSSCG-----GGCEEECTT
T ss_pred cccCCCCCEEEEEcCCCCC--cEEeEEEEEecCCEEEEEeCCCCC-----cCCEEEECC
Confidence 4679999999999655433 488999999999999999998743 235898863
No 66
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=90.74 E-value=2.8 Score=46.18 Aligned_cols=130 Identities=13% Similarity=0.179 Sum_probs=77.2
Q ss_pred cCCCCCCEEEEEecC---------CcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccc-----------
Q 044464 394 AMYKVNAKIELLCQD---------SGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKV----------- 453 (686)
Q Consensus 394 ~~FkvG~~VEV~S~E---------eGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~----------- 453 (686)
..|++|.++||...+ ++--.++.-|+|+++.+.+++++|+.+.++. ..=|+.+...
T Consensus 35 ~~~~~GMklEv~~~~~~~~~~~~~~~~p~~~WvAtV~~~~G~rLlLry~G~~~d~----~DFW~~~~S~~ihPvGWc~~~ 110 (447)
T 3h6z_A 35 DNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKALMSYEGFDTDS----HDFWVNLCNAEVHSVGWCATR 110 (447)
T ss_dssp TTCCTTCEEEEC----------------CCBEEEEEEEEETTEEEEEETTCSSGG----GCEEEETTTSSCBCTTHHHHH
T ss_pred hhcCCCCEEEEecCCcccccccccccCCCcEEEEEEhhhcccEEEEEEccCCCCC----CCccccCCCCceecCchHhhc
Confidence 579999999997432 2233467789999999999999999886432 2468876311
Q ss_pred ----cCCCccCCCCC--CC--------CCcCCCCCCC------CCCCCcCCCCEEEEeeCC---CeeEEEEEEEecCCCC
Q 044464 454 ----AKPDKLGMRCS--DR--------PTIRPTPPDN------REDLSLGIGTAVDAWWSD---GWWEGVVIGVDSSSTD 510 (686)
Q Consensus 454 ----a~pd~~g~R~~--~R--------~~IRP~PP~~------~~~~~~~vGD~VDAw~~D---GWWeGVV~kv~~~g~~ 510 (686)
..|. ++|.. .- .--++.|+.. .....|++|..|||-... .-|..+|+++. ++
T Consensus 111 g~~L~PP~--~i~~~~~dW~~~L~~~l~ga~~~P~~lf~~~~~~~~~~F~~GmkLE~vD~~~~~~i~vAtV~~v~---g~ 185 (447)
T 3h6z_A 111 GKPLIPPR--TIEHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQSRFRLGLNLECVDKDRISQVRLATVTKIV---GD 185 (447)
T ss_dssp TCCBCCCG--GGGGGCSCCHHHHHHHHTTCCCSCTTHHHHHHHHTSCSSCTTCEEEEECTTCTTEEEEEEEEEEE---TT
T ss_pred CceecCCc--cccccccCHHHHHHHHhcCCcCCCHHHhhhcccccccccCCCCEEEEEcCCCCccEEEEEEEEEE---CC
Confidence 1111 11100 00 0013344321 123579999999997653 67999999996 56
Q ss_pred eEEEEECCcceEEEeecCCCcc
Q 044464 511 NLQVYLSGESLFLNVNKNDLRI 532 (686)
Q Consensus 511 ky~VyFpGe~del~f~~sdLRp 532 (686)
++.|.|.+....+-++...-++
T Consensus 186 rl~l~~~d~~~dfwc~~~Sp~I 207 (447)
T 3h6z_A 186 RLFLRYFDSDDGFWCHEDSPII 207 (447)
T ss_dssp EEEEEETTCSCEEEEETTCTTE
T ss_pred cEEEEEECCCCCEEEeCCCCCc
Confidence 7777775543333334333333
No 67
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=90.74 E-value=0.61 Score=46.00 Aligned_cols=47 Identities=17% Similarity=0.328 Sum_probs=37.4
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEee-CCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVS-QKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~-~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
..++|+.+=+...++ |.||||+|+++. .+.+.|.|-|+-+ .|.|+.+
T Consensus 65 ~~~~G~~c~a~~~~d---~~WyRa~V~~~~~~~~~~V~~vDyGn-------~~~v~~~ 112 (226)
T 4b9x_A 65 KAEIGRPCCAFFSGD---GNWYRALVKEILPSGNVKVHFVDYGN-------VEEVTTD 112 (226)
T ss_dssp CCCTTCEEEEEETTT---TEEEEEEEEEECSSSEEEEECTTTCC-------EEEEEGG
T ss_pred CCCCCCEEEEEECCC---CeEEEEEEEEECCCCeEEEEEEecCC-------EEEEEHH
Confidence 457899998886555 489999999974 5689999999833 5888865
No 68
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=90.62 E-value=0.57 Score=42.70 Aligned_cols=59 Identities=8% Similarity=0.200 Sum_probs=43.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeC---------CeEEEEeCcccCCCCCCcceEEEecccccCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ---------KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKP 456 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~---------~ky~VeY~dL~deDgs~~L~EwV~~sr~a~p 456 (686)
.+.|.+|++|-+.-.+.+=...||.|+||++.. ..|+|-|...- ..+.|||+.+++...
T Consensus 17 ~~~F~~GEkVLc~hgd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GWn-----~~wDEWV~e~rllk~ 84 (110)
T 3m9p_A 17 KFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWN-----RSWDRWAAEDHVLRD 84 (110)
T ss_dssp -CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSC-----GGGCEEEEGGGEEEC
T ss_pred CCcccCCCEEEEEcCCCCCCCCceeeEEEEEEeccCcccccceEEEEEECCCC-----cchhhccCHhhhhcC
Confidence 478999999988754444456899999999731 36999997653 256799998765443
No 69
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.58 E-value=0.85 Score=39.86 Aligned_cols=53 Identities=21% Similarity=0.201 Sum_probs=45.6
Q ss_pred CCCcCCCCEEEEeeCC--CeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 479 DLSLGIGTAVDAWWSD--GWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D--GWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
...|++|+.|=|-..+ .|.-|.|.++. +++++.|.|-+=|.+.++...+|||-
T Consensus 19 ~~~~k~g~~vaak~~d~n~WyRakV~~v~--~~~~veVl~~DyGn~~~V~~~~LR~L 73 (85)
T 2eqk_A 19 PVKWENDMHCAVKIQDKNQWRRGQIIRMV--TDTLVEVLLYDVGVELVVNVDCLRKL 73 (85)
T ss_dssp CCCCCSSCEEEEECSSSCCEEEEEEEEEC--SSSEEEEECTTTCCEEEEETTTEEEC
T ss_pred ccCccCCCEEEEEeCCCCeEEEEEEEEec--CCCeEEEEEEccCCEEEEEccccccC
Confidence 4679999999998555 59999999985 67889999998888888999999983
No 70
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=89.91 E-value=0.05 Score=49.90 Aligned_cols=97 Identities=14% Similarity=0.211 Sum_probs=66.2
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeC-CeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCC
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPT 472 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~ 472 (686)
+.+.+|+.|-. -|+|||..|+|.++.+ -+++|.|..= .... .|.-
T Consensus 5 p~L~VGTeVSA-----KyrGAFCEAkIk~V~r~vKcKV~~k~~---~~~~----~v~d---------------------- 50 (118)
T 2lcd_A 5 AYLTVGTDVSA-----KYRGAFCEAKIKTVKRLVKVKVLLKQD---NTTQ----LVQD---------------------- 50 (118)
Confidence 45678876644 4899999999999764 5788888741 1110 1110
Q ss_pred CCCCCCCCCcCCCCEEEEeeC-CCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCC
Q 044464 473 PPDNREDLSLGIGTAVDAWWS-DGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDL 530 (686)
Q Consensus 473 PP~~~~~~~~~vGD~VDAw~~-DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdL 530 (686)
......+++|..|++-.. +.|-+|+|.++. ....|+|-|.. |++-++.+.+|
T Consensus 51 ---~~ikG~l~vG~~ve~~~~~~~~~~~~I~~i~--D~S~YtVVFdD-GD~ktLrRt~l 103 (118)
T 2lcd_A 51 ---DQVKGPLRVGAIVETRTSDGSFQEAIISKLT--DASWYTVVFDD-GDERTLRRTSL 103 (118)
Confidence 011246889999999887 459999999996 46789999984 55544444444
No 71
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=90.45 E-value=0.89 Score=37.95 Aligned_cols=52 Identities=19% Similarity=0.293 Sum_probs=46.1
Q ss_pred CCcCCCCEEEEeeCC--CeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 480 LSLGIGTAVDAWWSD--GWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 480 ~~~~vGD~VDAw~~D--GWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
..|.+||.|=|-|-| ++.++.|+.+. ....-|.|-|.. +-++++..++|||-
T Consensus 8 ~~~~vgd~VmaRW~Gd~~yYparI~Si~-s~~~~Y~V~fKd-gT~e~L~~kDIkp~ 61 (66)
T 2l8d_A 8 RKYADGEVVMGRWPGSVLYYEVQVTSYD-DASHLYTVKYKD-GTELALKESDIRLQ 61 (66)
T ss_dssp SSSCSSCEEEEECTTSSCEEEEEEEEEE-TTTTEEEEEETT-SCEEEEEGGGEECS
T ss_pred eEeecCCEEEEEcCCCccceEEEEEEec-cCCceEEEEecC-CCEEeechhccccc
Confidence 459999999998866 89999999997 678899999998 88889999999985
No 72
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=90.29 E-value=0.49 Score=46.83 Aligned_cols=46 Identities=22% Similarity=0.280 Sum_probs=37.1
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEee-CCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVS-QKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~-~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
..++|+.+-+... + |.||||+|+++. ++.+.|.|-|+-+ .|+|+.+
T Consensus 65 ~~~~G~~c~a~~~-d---~~wyRa~V~~~~~~~~~~V~~vDyGn-------~~~v~~~ 111 (246)
T 2hqx_A 65 APRRGEFCIAKFV-D---GEWYRARVEKVESPAKIHVFYIDYGN-------REVLPST 111 (246)
T ss_dssp CCCTTCEEEEECT-T---SCEEEEEEEEEEETTEEEEEETTTCC-------EEEECGG
T ss_pred CCCCCCEEEEEcC-C---CCEEEEEEEEEcCCCeEEEEEEeCCC-------eEEEeHH
Confidence 4579999999864 2 689999999985 5899999999843 5788765
No 73
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=90.24 E-value=0.62 Score=44.83 Aligned_cols=93 Identities=18% Similarity=0.343 Sum_probs=47.8
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPT 472 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~ 472 (686)
.+.|++|+.|+|+..++ .-|+.+. .....+-+=..|-...+..... . ...|...+.. -..+...
T Consensus 27 eLs~~~Gd~i~vl~~~~---~gWw~g~-~~g~~G~~P~~yv~~~~~~~~~--~-------~~~p~~~~~~---~~al~dy 90 (193)
T 1ng2_A 27 EMALSTGDVVEVVEKSE---SGWWFCQ-MKAKRGWIPASFLEPLDSPDET--E-------DPEPNYAGEP---YVAIKAY 90 (193)
T ss_dssp CCCBCTTCEEEEEECCT---TSCCEEE-ECCCCCCCCGGGCCCSSCSSCS--C-------CCCCCTTCEE---EEESSCB
T ss_pred cCCCCCCCEEEEEEecC---CCeEEEE-ECCeeeEechheEEeecccccc--c-------hhhcccccee---eeecccc
Confidence 58899999999998754 4588887 2111111222233222211000 0 0011100000 0012222
Q ss_pred CCCCCCCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 473 PPDNREDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 473 PP~~~~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
.+.......|..||.|.+.. ++|||.|..
T Consensus 91 ~a~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~ 121 (193)
T 1ng2_A 91 TAVEGDEVSLLEGEAVEVIHKLLDGWWVIRK 121 (193)
T ss_dssp CCCSTTBCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred CCCCCCcccccCCCEEEEEEecCCCeEEEEE
Confidence 22222346799999999988 489999983
No 74
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=89.49 E-value=2.1 Score=47.15 Aligned_cols=119 Identities=14% Similarity=0.134 Sum_probs=66.5
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccc-cCC----CccCCC-----
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKV-AKP----DKLGMR----- 462 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~-a~p----d~~g~R----- 462 (686)
...|++|.++|+.....-+ .-..|+|.++-+++++|.|++..+ ...-|+..... .-| .+.|..
T Consensus 151 ~~~F~~GmkLE~vD~~~~~--~~~vAtV~~v~g~rl~l~~~~~~~-----~~dfWc~~~Sp~IhPVGW~~~~G~~L~pP~ 223 (456)
T 3f70_A 151 KYPFRQGMRLEVVDKSQVS--RTRMAVVDTVIGGRLRLLYEDGDS-----DDDFWCHMWSPLIHPVGWSRRVGHGIKMSE 223 (456)
T ss_dssp SCSSCTTCEEEEECTTCTT--CEEEEEEEEEETTEEEEEECC---------CCEEEETTCTTEEETTHHHHHTC------
T ss_pred CCCCCCCCEEEEECCCCCc--ceEEEEEEEEECCEEEEEEcCCCC-----CCceEEeCCCCCeeccccHhhcCCccCCCc
Confidence 3579999999998655533 334899999999999999986532 12356654310 000 000100
Q ss_pred --------CCCCCCcCCCCCCCC--------CCCCcCCCCEEEEe---eCCCeeEEEEEEEecCCCCeEEEEECCcc
Q 044464 463 --------CSDRPTIRPTPPDNR--------EDLSLGIGTAVDAW---WSDGWWEGVVIGVDSSSTDNLQVYLSGES 520 (686)
Q Consensus 463 --------~~~R~~IRP~PP~~~--------~~~~~~vGD~VDAw---~~DGWWeGVV~kv~~~g~~ky~VyFpGe~ 520 (686)
.....-..+.|+... ....|++|..+||- .-..-..++|++|. +++.+.|+|.|..
T Consensus 224 ~~~dw~~~~~~~~~~~~ap~~lF~~~~~~~~~~~~Fk~GMKLEavDP~~~~~icvATV~~V~--~~~~l~l~~Dg~~ 298 (456)
T 3f70_A 224 RRSDMAHHPTFRKIYCDAVPYLFKKVRAVYTEGGWFEEGMKLEAIDPLNLGNICVATVCKVL--LDGYLMICVDGGP 298 (456)
T ss_dssp --------------------------CEEECCSCCCCTTCEEEEEETTEEEEEEEEEEEEEC--STTEEEEEEC---
T ss_pred cchhHHHHHHhhcccccCCHHHhccccccccccccccCCCEEEEEcCCCCCcEEEEEEEEEe--cCCEEEEEecCCC
Confidence 000001122233111 01239999998885 44578899999995 5788999999853
No 75
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=89.35 E-value=1.3 Score=37.10 Aligned_cols=52 Identities=19% Similarity=0.336 Sum_probs=45.8
Q ss_pred CCcCCCCEEEEeeCC--CeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 480 LSLGIGTAVDAWWSD--GWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 480 ~~~~vGD~VDAw~~D--GWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
..|.+||.|=|-|-| ++.++.|+.+. ..+.-|.|-|.. +-++++..++|||-
T Consensus 11 ~~f~vgd~VmaRW~Gd~~yYparItSit-s~~~~Y~VkfKd-gT~e~L~~kDIKp~ 64 (68)
T 2dig_A 11 RKFADGEVVRGRWPGSSLYYEVEILSHD-STSQLYTVKYKD-GTELELKENDIKSG 64 (68)
T ss_dssp CSSCSSCEEEEECTTTCCEEEEEEEEEE-TTTTEEEEECTT-SCEEEEETTTEECC
T ss_pred eEeecCCEEEEEccCCccceEEEEEEec-cCCceEEEEecC-CCEEEechhccccC
Confidence 459999999998765 89999999997 678899999998 88889999999984
No 76
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=89.13 E-value=0.66 Score=41.08 Aligned_cols=63 Identities=24% Similarity=0.384 Sum_probs=44.2
Q ss_pred CCCEEEEEecCCcceeeEEEEEEEEeeC-------CeEEEEeCcccCCCCCCcceEEEecccccCCC-ccCCCCCCCCCc
Q 044464 398 VNAKIELLCQDSGIRGCWFRCIVLQVSQ-------KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPD-KLGMRCSDRPTI 469 (686)
Q Consensus 398 vG~~VEV~S~EeGfrGsWF~AtVIk~~~-------~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd-~~g~R~~~R~~I 469 (686)
.|++|-|.-. .|.|++|+||++.. ..|+|-|..+- ..|-|||+.+|+.... ++|- ..+
T Consensus 17 ~~e~vlc~~~----dg~~yeAeIl~ir~~~~~~~~~~YYVHY~g~N-----kRlDEWV~~~RL~~~~~~~g~-----~~~ 82 (92)
T 2bud_A 17 PDKIYFIRRE----DGTVHRGQVLQSRTTENAAAPDEYYVHYVGLN-----RRLDGWVGRHRISDNADDLGG-----ITV 82 (92)
T ss_dssp TTSCEEEECT----TSCEEEEEEEEEECTTTCSSCCEEEEECSSSC-----TTTCEEEETTTEESCHHHHHT-----TTC
T ss_pred CCCEEEEEeC----CCCEEEEEEEEEeeccCCCCCcEEEEEeCCcc-----cccccccCHHHhchhcccCCC-----eEe
Confidence 4778777752 47999999999642 37999999873 3688999998875443 2232 355
Q ss_pred CCCCC
Q 044464 470 RPTPP 474 (686)
Q Consensus 470 RP~PP 474 (686)
-|.||
T Consensus 83 ~~~~~ 87 (92)
T 2bud_A 83 LPAPP 87 (92)
T ss_dssp CCCCC
T ss_pred ecCCc
Confidence 56555
No 77
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=89.08 E-value=0.74 Score=44.37 Aligned_cols=59 Identities=22% Similarity=0.285 Sum_probs=46.8
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEEEEEecC-----------------CCCeEEEEECC--cceEEEeecCCCcce----
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVVIGVDSS-----------------STDNLQVYLSG--ESLFLNVNKNDLRIS---- 533 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV~kv~~~-----------------g~~ky~VyFpG--e~del~f~~sdLRps---- 533 (686)
..-+++|+.|||-. -|+|-|+.|.+|... .+--|.|.|.+ +...+++..+++||+
T Consensus 8 ~glYKinelVDarD~~~GAWFEA~Iv~Vtr~~~~~~~p~~s~~~~~~~edviYhVkyddype~gvv~~~~~~iRpRARt~ 87 (161)
T 3db3_A 8 LGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARARTI 87 (161)
T ss_dssp CCSSCTTCEEEEECTTTCCEEEEEEEEEEEC-----------------CCEEEEEEESSCGGGCEEEEEGGGEECCCCCB
T ss_pred cceEEecceeeeeccCCCcceEEEEEEEEecCCCCCCcccccccCCCcCceEEEEEeccCccCCeEecchhccccceEEe
Confidence 35589999999998 789999999997532 23479999874 667788889999986
Q ss_pred eeec
Q 044464 534 RDWA 537 (686)
Q Consensus 534 ldW~ 537 (686)
+.|.
T Consensus 88 l~w~ 91 (161)
T 3db3_A 88 IKWQ 91 (161)
T ss_dssp CCGG
T ss_pred ccHH
Confidence 5565
No 78
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=89.04 E-value=0.69 Score=43.78 Aligned_cols=40 Identities=15% Similarity=0.195 Sum_probs=32.9
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEeeC-CeEEEEeCcccC
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-KQMKVRYDDVQD 437 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-~ky~VeY~dL~d 437 (686)
..++|+.+-+...++ |.||||+|+++.. +++.|.|-|+-+
T Consensus 47 ~~~~G~~c~A~~~~d---~~wyRa~I~~~~~~~~~~V~fvDyGn 87 (169)
T 3ntk_A 47 DLKEGALCVAQFPED---EVFYRAQIRKVLDDGKCEVHFIDFGN 87 (169)
T ss_dssp CCCTTCEEEEEETTT---TEEEEEEEEEECSTTCEEEEETTTTE
T ss_pred CCCCCCEEEEEECCC---CcEEEEEEEEECCCCEEEEEEEecCC
Confidence 578999999886444 5899999999864 579999999844
No 79
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=87.83 E-value=2 Score=35.42 Aligned_cols=40 Identities=13% Similarity=0.325 Sum_probs=32.6
Q ss_pred CCCcCCCCEEEEeeC-CCeeEEEEEEEecCCCCeEEEEECCc
Q 044464 479 DLSLGIGTAVDAWWS-DGWWEGVVIGVDSSSTDNLQVYLSGE 519 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~-DGWWeGVV~kv~~~g~~ky~VyFpGe 519 (686)
...|++|..+||... +-|+++.|++|. ..+.++.|.|.|-
T Consensus 10 ~~~F~vGmkLEa~d~~~p~~~AtV~~v~-~~~~~~~VhfdGw 50 (69)
T 3sd4_A 10 GISFEVGAQLEARDRLKNWYPAHIEDID-YEEGKVLIHFKRW 50 (69)
T ss_dssp TCCCSTTCEEEEECTTSCEEEEEEEEEE-TTTTEEEEEETTS
T ss_pred CCCcCCCCEEEEEECCCCccccEEEEEe-ccCCEEEEEeCCC
Confidence 466999999999764 458999999984 3578899999874
No 80
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=86.90 E-value=1.7 Score=38.93 Aligned_cols=58 Identities=17% Similarity=0.176 Sum_probs=45.7
Q ss_pred CCCCcCCCCEEEEeeCC-CeeEEEEEEEec----CCCCeEEEEECCcceEEEeecCCCcceee
Q 044464 478 EDLSLGIGTAVDAWWSD-GWWEGVVIGVDS----SSTDNLQVYLSGESLFLNVNKNDLRISRD 535 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~D-GWWeGVV~kv~~----~g~~ky~VyFpGe~del~f~~sdLRpsld 535 (686)
....|.+||.|=|-..+ .||.|+|..+-. ...+.|.|+|-|+.+..-+..++|.|-.+
T Consensus 16 ~~~~~~~GdlVwaK~kGyP~WPa~V~~~p~~~~k~~~~~~~V~FFGt~~~awv~~~~l~pf~~ 78 (110)
T 1ri0_A 16 RQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEE 78 (110)
T ss_dssp CSSSCCTTCEEEEEETTEEEEEEEEECCCSSSSCCCSSCEEEEETTTTEEEEECSTTEECHHH
T ss_pred ccCCCCCCCEEEEEeCCCCCCCEEEecccHhhcCCCCCEEEEEEecCCCEEEECHHHccchhh
Confidence 34679999999886665 899999997531 13578999999998888888888887654
No 81
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=86.38 E-value=2.5 Score=35.57 Aligned_cols=58 Identities=14% Similarity=0.213 Sum_probs=40.1
Q ss_pred CCCCCCCCCCCCcCCCCEEEEeeC-CCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCc
Q 044464 470 RPTPPDNREDLSLGIGTAVDAWWS-DGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLR 531 (686)
Q Consensus 470 RP~PP~~~~~~~~~vGD~VDAw~~-DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLR 531 (686)
-|.||.......|.+|+-|=|-|+ |....|.|++. ...++.|.|....+. -+..++||
T Consensus 4 ~pp~~a~~pa~~~~~geDVL~rw~DG~fYLGtIVd~---~~~~ClV~FeD~S~~-Wv~~kdi~ 62 (69)
T 2xk0_A 4 APPVAAPSPAVTYALQEDVFIKCNDGRFYLGTIIDQ---TSDQYLIRFDDQSEQ-WCEPDKLR 62 (69)
T ss_dssp SCSSSSSCCCCCCCTTCEEEEECTTSCEEEEEEEEE---CSSCEEEEETTCCEE-EECTTTEE
T ss_pred CCCCCCCCcccccccCCeEEEEecCCCEEEEEEEec---CCceEEEEecCCcce-eeeHHHHH
Confidence 455553333488999999977555 56999999775 478999999875553 23444444
No 82
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=85.70 E-value=3 Score=34.99 Aligned_cols=55 Identities=16% Similarity=0.265 Sum_probs=42.8
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIR 470 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IR 470 (686)
...|.+|+.|--+-- | -..+|+|.|.++. ..-|.|.|.+ +. +|.+.. ..||
T Consensus 10 ~~~f~vgd~VmaRW~--G-d~~yYparItSits~~~~Y~VkfKd--gT------~e~L~~----------------kDIK 62 (68)
T 2dig_A 10 SRKFADGEVVRGRWP--G-SSLYYEVEILSHDSTSQLYTVKYKD--GT------ELELKE----------------NDIK 62 (68)
T ss_dssp CCSSCSSCEEEEECT--T-TCCEEEEEEEEEETTTTEEEEECTT--SC------EEEEET----------------TTEE
T ss_pred ceEeecCCEEEEEcc--C-CccceEEEEEEeccCCceEEEEecC--CC------EEEech----------------hccc
Confidence 468999999999976 2 2578999999986 3579999998 21 466765 3899
Q ss_pred CCCC
Q 044464 471 PTPP 474 (686)
Q Consensus 471 P~PP 474 (686)
|.|.
T Consensus 63 p~~~ 66 (68)
T 2dig_A 63 SGPS 66 (68)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9985
No 83
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=85.59 E-value=9.1 Score=42.10 Aligned_cols=116 Identities=14% Similarity=0.110 Sum_probs=70.4
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccc---------------cCCC
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKV---------------AKPD 457 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~---------------a~pd 457 (686)
...|++|.++|+.-...-. .=..|||+++.+++++|.|.+. .-.-|+..... ..|.
T Consensus 154 ~~~F~~GmkLE~vD~~~~~--~i~vAtV~~v~g~rl~l~~~d~-------~~dfwc~~~Sp~I~PVGW~~~~g~~L~pP~ 224 (447)
T 3h6z_A 154 QSRFRLGLNLECVDKDRIS--QVRLATVTKIVGDRLFLRYFDS-------DDGFWCHEDSPIIHPVGWATTVGHNLAAPQ 224 (447)
T ss_dssp SCSSCTTCEEEEECTTCTT--EEEEEEEEEEETTEEEEEETTC-------SCEEEEETTCTTEECTTHHHHHTCEEECCH
T ss_pred ccccCCCCEEEEEcCCCCc--cEEEEEEEEEECCcEEEEEECC-------CCCEEEeCCCCCccccchHHhcCccccCCh
Confidence 4579999999999655433 4589999999999999999653 11346654310 1110
Q ss_pred ccCCCC-CC-CCCcC----CCCC-------------CCCCCCCcCCCCEEEEee---CCCeeEEEEEEEecCCCCeEEEE
Q 044464 458 KLGMRC-SD-RPTIR----PTPP-------------DNREDLSLGIGTAVDAWW---SDGWWEGVVIGVDSSSTDNLQVY 515 (686)
Q Consensus 458 ~~g~R~-~~-R~~IR----P~PP-------------~~~~~~~~~vGD~VDAw~---~DGWWeGVV~kv~~~g~~ky~Vy 515 (686)
....+. .. ...++ ++|. .......|++|..+||-. -..-..++|++|. ++..+.|.
T Consensus 225 ~y~~~~~~~~~~ll~~~~~~ap~~LF~~~~~~~~~~~~~~~~~F~~GMKLEavDp~~~~~icvATV~~V~--~~~~~~v~ 302 (447)
T 3h6z_A 225 DYLERMLAGREAMIEVHEDDATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVL--KFGYMMIR 302 (447)
T ss_dssp HHHHHHHTTTTTCCCCCTTBCCGGGSCCSSCTHHHHTSCCCCCCCTTCEEEEEETTEEEEEEEEEEEEEC--STTEEEEE
T ss_pred hhhccchhHHHHHHhhcccCCCHHHccCccccccccccccccccccccEEEeeccCCCCcEEEEEEEEec--cCCEEEEE
Confidence 000000 00 00000 1111 012235799999988854 4567889999985 56788999
Q ss_pred ECCc
Q 044464 516 LSGE 519 (686)
Q Consensus 516 FpGe 519 (686)
|.|.
T Consensus 303 ~Dg~ 306 (447)
T 3h6z_A 303 IDSY 306 (447)
T ss_dssp ETTS
T ss_pred ECCC
Confidence 9874
No 84
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=85.44 E-value=3.7 Score=33.55 Aligned_cols=46 Identities=11% Similarity=0.061 Sum_probs=37.2
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeC--CeEEEEeCcccCCCCCCcceEEEecc
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ--KQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~--~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
+.|.+|+.|=++..+ |-.|.|||++++. .+|+|++.|= -+-|+...
T Consensus 2 ~~f~~GedVLarwsD----G~fYlGtI~~V~~~~~~clV~F~D~--------s~~W~~~k 49 (58)
T 4hcz_A 2 PRLWEGQDVLARWTD----GLLYLGTIKKVDSAREVCLVQFEDD--------SQFLVLWK 49 (58)
T ss_dssp CSCCTTCEEEEECTT----SCEEEEEEEEEETTTTEEEEEETTS--------CEEEEEGG
T ss_pred CccccCCEEEEEecC----CCEEeEEEEEEecCCCEEEEEEcCC--------CeEEEEhH
Confidence 579999999998765 7899999999864 5899998762 25688764
No 85
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=85.08 E-value=1.5 Score=41.88 Aligned_cols=59 Identities=20% Similarity=0.308 Sum_probs=48.6
Q ss_pred CCCCcCCCCEEEEeeCC-CeeEEEEEEEec-----CCCCeEEEEECCcceEEEeecCCCcceeee
Q 044464 478 EDLSLGIGTAVDAWWSD-GWWEGVVIGVDS-----SSTDNLQVYLSGESLFLNVNKNDLRISRDW 536 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~D-GWWeGVV~kv~~-----~g~~ky~VyFpGe~del~f~~sdLRpsldW 536 (686)
....|.+||.|=|-..+ .||.|+|..... ...+.|.|+|=|+.+..-+..++|.|-.+-
T Consensus 13 dg~~f~~GDLVWaKvkG~PwWPa~V~~~~~~~k~~~~~~~~~V~FFG~~~~awv~~~~L~pf~e~ 77 (154)
T 3llr_A 13 DGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTRWVMWFGDGKFSVVCVEKLMPLSSF 77 (154)
T ss_dssp SSCCCCTTCEEEECCTTSCCEEEEEECGGGTTSCCCCTTEEEEEETTTCCEEEEEGGGEEEGGGH
T ss_pred cCCCCccCCEEEEecCCCCCCCEEEecccccccccCCCCEEEEEEeCCCCEEEEcHHHCcchhhh
Confidence 34679999999997666 999999998641 134689999999999999999999887664
No 86
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=85.06 E-value=0.97 Score=42.46 Aligned_cols=56 Identities=16% Similarity=0.163 Sum_probs=44.1
Q ss_pred CCCcCCCCEEEEeeCC-CeeEEEEEEEec----CCCCeEEEEECCcceEEEeecCCCccee
Q 044464 479 DLSLGIGTAVDAWWSD-GWWEGVVIGVDS----SSTDNLQVYLSGESLFLNVNKNDLRISR 534 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D-GWWeGVV~kv~~----~g~~ky~VyFpGe~del~f~~sdLRpsl 534 (686)
...|.+||.|=|-..+ -||.|.|+.... ...+.|.|+|-|+.+..-+...+|.|-.
T Consensus 20 ~~~f~~GdlVwaK~~g~p~WPa~V~~~~~~~~~~~~~~~~V~FfG~~~~awv~~~~l~~f~ 80 (153)
T 4fu6_A 20 TRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYS 80 (153)
T ss_dssp GGGCCTTCEEEECCTTSCCEEEEECCCC---CCCCTTCEEEEETTTCCEEEECGGGEEEHH
T ss_pred ccCCCCCCEEEEeCCCCCCCCEEEeEchhhccCCCCCEEEEEecCCCCeEEeCHHHccChH
Confidence 3569999999887765 799999987532 1346899999999988888888887764
No 87
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=85.04 E-value=1.2 Score=38.80 Aligned_cols=56 Identities=13% Similarity=0.146 Sum_probs=45.1
Q ss_pred CCcCCCCEEEEeeCC-CeeEEEEEEEec----CCCCeEEEEECCcceEEEeecCCCcceee
Q 044464 480 LSLGIGTAVDAWWSD-GWWEGVVIGVDS----SSTDNLQVYLSGESLFLNVNKNDLRISRD 535 (686)
Q Consensus 480 ~~~~vGD~VDAw~~D-GWWeGVV~kv~~----~g~~ky~VyFpGe~del~f~~sdLRpsld 535 (686)
..|++||.|=|-..+ -||.|+|..+.+ ...+.|.|+|-|+.+..-+..++|.|-.+
T Consensus 4 ~~f~~GdlVwaK~~g~p~WPa~V~~~~~~~~k~~~~~~~V~FFGt~~~awv~~~~l~pf~~ 64 (94)
T 3qby_A 4 HAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDK 64 (94)
T ss_dssp CCCCTTCEEEECCTTSCCEEEEECCCCTTSBCCCTTCEEEEETTTCCEEEECGGGEEEHHH
T ss_pred CcCccCCEEEEecCCCCCCCEEEeecccccccCCCCEEEEEEEcCCCcceEchhHeeEHHH
Confidence 458999999886665 999999998742 12468999999999998888888887664
No 88
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=84.65 E-value=1.2 Score=49.64 Aligned_cols=46 Identities=22% Similarity=0.277 Sum_probs=37.7
Q ss_pred CCCCCCEEEEEecCCcceeeEEEEEEEEeeC-CeEEEEeCcccCCCCCCcceEEEecc
Q 044464 395 MYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-KQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 395 ~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
..++|+.+-+... -|.||||+|+++.. +.+.|.|-|+-+ .|.|+.+
T Consensus 411 ~~~~G~~c~a~~~----d~~wyRa~I~~v~~~~~~~V~fvDyGn-------~e~v~~~ 457 (570)
T 3bdl_A 411 APRRGEFCIAKFV----DGEWYRARVEKVESPAKIHVFYIDYGN-------REVLPST 457 (570)
T ss_dssp CCCTTCEEEEECT----TSCEEEEEEEEEEETTEEEEEETTTCC-------EEEECGG
T ss_pred CCCcCCEEEEEEC----CCCEEEEEEEEEcCCCeEEEEEEeCCC-------eEEEEHH
Confidence 4679999999864 37899999999865 899999999843 5788865
No 89
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=83.95 E-value=2.8 Score=40.18 Aligned_cols=50 Identities=20% Similarity=0.206 Sum_probs=43.2
Q ss_pred CCcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcc
Q 044464 480 LSLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRI 532 (686)
Q Consensus 480 ~~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRp 532 (686)
..+++|+.+=|.+ ++.|.-|+|+++. ++.+.|+|-+-|....+..++||+
T Consensus 50 ~~~~~g~~c~a~~~~d~~wyRa~V~~v~---~~~~~V~~vDyG~~~~v~~~~l~~ 101 (218)
T 2wac_A 50 YTPKRGDLVAAQFTLDNQWYRAKVERVQ---GSNATVLYIDYGNKETLPTNRLAA 101 (218)
T ss_dssp CCCCTTCEEEEECTTTCCEEEEEEEEEE---TTEEEEEETTTCCEEEEEGGGEEE
T ss_pred ccCCcCCEEEEEECCCCeEEEEEEEEec---CCeEEEEEEecCCeEEEchHHccc
Confidence 4578999999987 4799999999995 389999999888888888888886
No 90
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=82.87 E-value=2.1 Score=43.31 Aligned_cols=53 Identities=23% Similarity=0.303 Sum_probs=42.5
Q ss_pred cCCCCEEEEee--CCCeeEEEEEEEecC--------CCCeEEEEECC--cceEEEeecCCCccee
Q 044464 482 LGIGTAVDAWW--SDGWWEGVVIGVDSS--------STDNLQVYLSG--ESLFLNVNKNDLRISR 534 (686)
Q Consensus 482 ~~vGD~VDAw~--~DGWWeGVV~kv~~~--------g~~ky~VyFpG--e~del~f~~sdLRpsl 534 (686)
+++|+.|||-. .|+|-+|.|+.|... .+-.|.|-|.+ +.....+..++|||+-
T Consensus 3 yki~~~vd~~d~~~Gawfea~i~~v~~~~~~~~~~~d~~~y~v~y~~~~~~~~~~~~~~~irpra 67 (226)
T 3ask_A 3 YKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARA 67 (226)
T ss_dssp SCTTCEEEEECTTTCCEEEEEEEEEEECC------CCCEEEEEEETTCGGGCEEEEEGGGEEECC
T ss_pred cccCceEEeeecCCCceeEEEEEEEeccccccCCCCCceEEEeecccCcccCceecccccccccc
Confidence 78999999987 679999999999742 23468888874 6677888889999876
No 91
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=82.64 E-value=2.4 Score=40.01 Aligned_cols=57 Identities=21% Similarity=0.329 Sum_probs=45.6
Q ss_pred CCCcCCCCEEEEeeCC-CeeEEEEEEEecC-----CCCeEEEEECCcceEEEeecCCCcceee
Q 044464 479 DLSLGIGTAVDAWWSD-GWWEGVVIGVDSS-----STDNLQVYLSGESLFLNVNKNDLRISRD 535 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D-GWWeGVV~kv~~~-----g~~ky~VyFpGe~del~f~~sdLRpsld 535 (686)
...|.+||.|=|-..+ .||.|+|+..... ..+.|.|+|-|+++..-+..++|.|--+
T Consensus 9 ~~~~~~GDlVWaKvkGyPwWPa~V~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~L~p~~~ 71 (147)
T 1khc_A 9 DKEFGIGDLVWGKIKGFSWWPAMVVSWKATSKRQAMPGMRWVQWFGDGKFSEISADKLVALGL 71 (147)
T ss_dssp SSSCCTTCEEEEEETTTEEEEEEEECGGGTTSCCCCTTEEEEEETTTCCEEEEEGGGCEETTS
T ss_pred CccCcCCCEEEEecCCcCCCCEEeccchhhhcccCCCCeEEEEEecCCCEEEEcHHHCccchH
Confidence 4679999999776554 8999999986431 2468999999999999999999998543
No 92
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=82.59 E-value=2.7 Score=41.45 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=48.0
Q ss_pred ceeeEEEEEEEEe-eCCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCCCCCCCCCCCcCCCCEEE
Q 044464 411 IRGCWFRCIVLQV-SQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPTPPDNREDLSLGIGTAVD 489 (686)
Q Consensus 411 frGsWF~AtVIk~-~~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~PP~~~~~~~~~vGD~VD 489 (686)
-.|.++...|..+ +...++|+..+-.. .-..|.+.+... ..-.||. .....+.+|+.+=
T Consensus 14 ~~~~~~~V~Vt~v~~p~~f~vq~~~~~~--~l~~l~~~l~~~-----------------~~~~~~~-~~~~~~~~G~~c~ 73 (246)
T 2hqx_A 14 RSASYKPVFVTEITDDLHFYVQDVETGT--QFQKLMENMRND-----------------IASHPPV-EGSYAPRRGEFCI 73 (246)
T ss_dssp ---------------------------C--HHHHHHHHHHHH-----------------HHHSCCC-TTTCCCCTTCEEE
T ss_pred CCCCEEEEEEEEECCCCEEEEEECCcHH--HHHHHHHHHHHH-----------------HhhCCCC-CCCCCCCCCCEEE
Confidence 3578888888886 45788888654210 001112211110 1101111 1134578999999
Q ss_pred Eee-CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 490 AWW-SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 490 Aw~-~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
|.+ ++.|.-|+|+++. .++.+.|+|-+-|....+..++||+-
T Consensus 74 a~~~d~~wyRa~V~~~~--~~~~~~V~~vDyGn~~~v~~~~lr~l 116 (246)
T 2hqx_A 74 AKFVDGEWYRARVEKVE--SPAKIHVFYIDYGNREVLPSTRLGTL 116 (246)
T ss_dssp EECTTSCEEEEEEEEEE--ETTEEEEEETTTCCEEEECGGGEECC
T ss_pred EEcCCCCEEEEEEEEEc--CCCeEEEEEEeCCCeEEEeHHHhhcC
Confidence 988 6899999999986 35799999998888888888888874
No 93
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=82.52 E-value=2.9 Score=38.39 Aligned_cols=68 Identities=19% Similarity=0.217 Sum_probs=45.8
Q ss_pred CCcCCCCCCCCCCCCcCCCCEEEEeeCC-CeeEEEEEEEecC--------CCCeEEEEECCcc-eEEEeecCCCcceeee
Q 044464 467 PTIRPTPPDNREDLSLGIGTAVDAWWSD-GWWEGVVIGVDSS--------STDNLQVYLSGES-LFLNVNKNDLRISRDW 536 (686)
Q Consensus 467 ~~IRP~PP~~~~~~~~~vGD~VDAw~~D-GWWeGVV~kv~~~--------g~~ky~VyFpGe~-del~f~~sdLRpsldW 536 (686)
.+.|+..|. ...|.+||.|=|-..+ -||.|.|+..... ....|.|+|-|+. +..-+..++|.|-.+-
T Consensus 11 r~~~~~~~~---~~~~~~GdlVwaK~~g~P~WPa~V~~~~~~~~~~~~~~~~~~~~V~FFg~~~~~aWv~~~~l~pf~~~ 87 (134)
T 2gfu_A 11 RSVAPAAPT---SSDFSPGDLVWAKMEGYPWWPSLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGS 87 (134)
T ss_dssp SSCCCCCCS---SCCCCTTSEEEECCTTSCCEEEECCCCSSTTCCEEESSSCEEEEEEECSSSCEEEEECGGGEEESCCT
T ss_pred cccccccCc---CCCCCCCCEEEEeecCCCCCCeeecchhhhhhhhhccCCCceEEEEECCCCCceEEECHHHcccCcch
Confidence 345555553 4679999999775554 8999999985211 1357999888874 5555666666665544
Q ss_pred c
Q 044464 537 A 537 (686)
Q Consensus 537 ~ 537 (686)
.
T Consensus 88 ~ 88 (134)
T 2gfu_A 88 K 88 (134)
T ss_dssp T
T ss_pred h
Confidence 3
No 94
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=78.50 E-value=3.6 Score=36.38 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=45.1
Q ss_pred CCCcCCCCEEEEeeCC-CeeEEEEEEEecC---------CCCeEEEEECCcceEEEeecCCCcceeee
Q 044464 479 DLSLGIGTAVDAWWSD-GWWEGVVIGVDSS---------STDNLQVYLSGESLFLNVNKNDLRISRDW 536 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D-GWWeGVV~kv~~~---------g~~ky~VyFpGe~del~f~~sdLRpsldW 536 (686)
...+.+||.|=|-..+ -||.|.|+..... ....|.|+|-|+.+..-+...+|.|-.+-
T Consensus 6 g~~~~~GdlVwaK~~g~p~WPa~V~~~~~~p~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~p~~~~ 73 (110)
T 2daq_A 6 SGKLHYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEG 73 (110)
T ss_dssp CCSCCSSEEEEEECSSSCEEEEEECCTTTSCHHHHTSCCCSSCEEEEETTTTEEEEECSSSSEECCSS
T ss_pred CCCCCCCCEEEEEeCCCCCCceeeCChhhCCHHHhhccCCCCcEEEEEecCCCEEEEcHHHCcCcchh
Confidence 3567899999776554 7999999986211 24679999999999888888888887653
No 95
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=78.33 E-value=3.9 Score=37.77 Aligned_cols=53 Identities=17% Similarity=0.357 Sum_probs=41.4
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
..|++|.++|+.-...- ..-..|||+++.+.+++|+|+-..+++. -.-|+...
T Consensus 10 ~~f~~GmKLEa~D~~~p--~~~~vAtV~~v~g~rl~l~~dG~~~~~~---~D~W~~~~ 62 (127)
T 1wjr_A 10 DLITVGSLIELQDSQNP--FQYWIVSVIENVGGRLRLRYVGLEDTES---YDQWLFYL 62 (127)
T ss_dssp HHCCTTCEEEEECSSCS--SCEEEEECCCEETTEEEECBTTCSSCCS---SCEEEETT
T ss_pred hhccCCCEeEEecCCCC--CcEEEEEEeeeeCCEEEEEecCCCCCCC---CCEeEeCC
Confidence 47999999999855443 6677899999999999999998865332 24788863
No 96
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=78.02 E-value=3.5 Score=38.80 Aligned_cols=52 Identities=8% Similarity=0.324 Sum_probs=39.6
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeC-------------------------------C-----------eEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-------------------------------K-----------QMKV 430 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-------------------------------~-----------ky~V 430 (686)
.+.|.+|++|-+.- .+.||.|+||++.. + .|+|
T Consensus 7 ~~~f~~gekvl~~h-----g~llYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~V 81 (136)
T 2k3y_A 7 EQEFALGGRVLAFH-----GPLMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFFI 81 (136)
T ss_dssp GGSCCTTSEEEEEC-----SSCEEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEEE
T ss_pred ccccCCCCEEEEEE-----CCeeEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEEE
Confidence 46899999998876 35699999998641 1 6888
Q ss_pred EeCcccCCCCCCcceEEEeccccc
Q 044464 431 RYDDVQDEDGSGNLEEWIPVYKVA 454 (686)
Q Consensus 431 eY~dL~deDgs~~L~EwV~~sr~a 454 (686)
-|...- ..+-|||+..|+.
T Consensus 82 HY~GWn-----~rwDEWV~~dRil 100 (136)
T 2k3y_A 82 HYQGWK-----SSWDEWVGYDRIR 100 (136)
T ss_dssp CCTTSC-----GGGCEEEETTTEE
T ss_pred EeCCcC-----CcceeeecHhhhh
Confidence 888763 2567999987653
No 97
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=78.02 E-value=3.6 Score=36.62 Aligned_cols=56 Identities=18% Similarity=0.239 Sum_probs=41.9
Q ss_pred CCCcCCCCEEEEeeCC-CeeEEEEEEEec---------CCCCeEEEEECCcceEEEeecCCCccee
Q 044464 479 DLSLGIGTAVDAWWSD-GWWEGVVIGVDS---------SSTDNLQVYLSGESLFLNVNKNDLRISR 534 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D-GWWeGVV~kv~~---------~g~~ky~VyFpGe~del~f~~sdLRpsl 534 (686)
+..|.+||.|=|-..+ -||.|.|+.-.. .....|.|+|=|+.+..=+...+|.|-.
T Consensus 3 ~~~~~~GdlVwaK~~gyP~WPa~V~~~~~~p~~v~~~~~~~~~~~V~FFg~~~~aWv~~~~l~p~~ 68 (108)
T 2l89_A 3 DDRLNFGDRILVKAPGYPWWPALLLRRKETKDSLNTNSSFNVLYKVLFFPDFNFAWVKRNSVKPLL 68 (108)
T ss_dssp SCCCCTTEEEEEECSSSCEEEEEEEEEEEEESSSCSSSCEEEEEEEEETTTTEEEEECGGGEEECC
T ss_pred CCcccCCCEEEEEeCCcCCCceEecCcccCcHHHhhccCCCCeEEEEECCCCCEEEEchhhceeCC
Confidence 4578999999776654 899999976321 1246899999998887777777777644
No 98
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=77.98 E-value=5.5 Score=33.55 Aligned_cols=47 Identities=21% Similarity=0.540 Sum_probs=39.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
...|..|+-|=++..+ |-.|.+||++..+.+++|+|.|- -+-||...
T Consensus 13 a~~~~~geDVL~rw~D----G~fYLGtIVd~~~~~ClV~FeD~--------S~~Wv~~k 59 (69)
T 2xk0_A 13 AVTYALQEDVFIKCND----GRFYLGTIIDQTSDQYLIRFDDQ--------SEQWCEPD 59 (69)
T ss_dssp CCCCCTTCEEEEECTT----SCEEEEEEEEECSSCEEEEETTC--------CEEEECTT
T ss_pred ccccccCCeEEEEecC----CCEEEEEEEecCCceEEEEecCC--------cceeeeHH
Confidence 3689999999999776 67899999999999999999873 24688754
No 99
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=76.62 E-value=11 Score=32.43 Aligned_cols=42 Identities=26% Similarity=0.260 Sum_probs=34.4
Q ss_pred CCCcCCCCEEEE-eeCCCeeEEEEEEEecCCCCeEEEEECCcce
Q 044464 479 DLSLGIGTAVDA-WWSDGWWEGVVIGVDSSSTDNLQVYLSGESL 521 (686)
Q Consensus 479 ~~~~~vGD~VDA-w~~DGWWeGVV~kv~~~g~~ky~VyFpGe~d 521 (686)
...|.+|+-|=| |.+|-...|.|++|. ....+|.|.|....+
T Consensus 24 ~~~f~eGeDVLarwsDGlfYLGTI~kV~-~~~e~ClV~F~D~S~ 66 (79)
T 2m0o_A 24 RPRLWEGQDVLARWTDGLLYLGTIKKVD-SAREVCLVQFEDDSQ 66 (79)
T ss_dssp CCCCCTTCEEEBCCTTSCCCEEEEEEEE-TTTTEEEEEETTSCE
T ss_pred cceeccCCEEEEEecCCCEEeEEEEEec-cCCCEEEEEEcCCCe
Confidence 468999999999 555569999999996 568899999986444
No 100
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=76.11 E-value=2.2 Score=43.74 Aligned_cols=24 Identities=33% Similarity=0.508 Sum_probs=19.9
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
.-.|+.||.|.+.. ++|||.|.+-
T Consensus 255 eL~~~~Gd~i~v~~~~~~gWw~g~~~ 280 (304)
T 2eyz_A 255 ALALEVGELVKVTKINVSGQWEGECN 280 (304)
T ss_dssp CCCBCTTSCCEEEEECTTSCEEEEET
T ss_pred eecccCCCEEEEEEecCCCeEEEEEC
Confidence 45789999999987 5899999853
No 101
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=75.90 E-value=6.2 Score=40.04 Aligned_cols=52 Identities=13% Similarity=0.226 Sum_probs=41.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
...|++|.++|+.-.-. -..+..|||.++.+.+++|.|+...+ ....|++..
T Consensus 169 ~~~F~~GmKLEavD~~~--p~~icvATV~~v~g~rl~v~fDgw~~-----~~D~W~~~d 220 (243)
T 2biv_A 169 LNNFKVGMKLEAIDKKN--PYLICPATIGDVKGDEVHITFDGWSG-----AFDYWCKYD 220 (243)
T ss_dssp SCCCCTTCEEEEECTTS--TTCEEEEEEEEEETTEEEEEETTSCG-----GGCEEEETT
T ss_pred cccccCCCEEEEEccCC--CCeEEEEEEEEecCCEEEEEECCCCC-----cCCEEEeCC
Confidence 35899999999985543 24778999999999999999988743 235899863
No 102
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=75.85 E-value=6.6 Score=35.76 Aligned_cols=57 Identities=9% Similarity=0.211 Sum_probs=41.7
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee---C--C----eEEEEeCcccCCCCCCcceEEEeccccc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS---Q--K----QMKVRYDDVQDEDGSGNLEEWIPVYKVA 454 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~---~--~----ky~VeY~dL~deDgs~~L~EwV~~sr~a 454 (686)
.+.|.+|++|=+.=.+..-..-+|.|+||++. + + .|+|-|.---. ...|||+.+|+.
T Consensus 17 k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~-----~WDEWV~~drll 82 (110)
T 3oa6_A 17 KFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNR-----SWDRWAAEDHVL 82 (110)
T ss_dssp -CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCG-----GGCEEEEGGGEE
T ss_pred CcccCCCCEEEEEecCCCCCcccEEEEEEEEEeccCCcCCcccEEEEEECCcCc-----chhhccChhhhh
Confidence 57899999998866555445678999999863 1 1 49999987632 456999987653
No 103
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=74.27 E-value=13 Score=35.73 Aligned_cols=102 Identities=20% Similarity=0.202 Sum_probs=65.3
Q ss_pred CCCCEEEEEecCCcceeeEEEEEEEEe-eCCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCc--CCCC
Q 044464 397 KVNAKIELLCQDSGIRGCWFRCIVLQV-SQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTI--RPTP 473 (686)
Q Consensus 397 kvG~~VEV~S~EeGfrGsWF~AtVIk~-~~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~I--RP~P 473 (686)
.+|.+|=.+-.+.+ =||+++|.+. .+++|.|.++| |. +-.|... .+| .|.|
T Consensus 10 ~iG~rVfArWsd~~---yyYpG~V~~~~~~~~Y~V~FdD-----G~---~k~v~~~---------------divv~~~LP 63 (156)
T 1ssf_A 10 FVGLRVVAKWSSNG---YFYSGKITRDVGAGKYKLLFDD-----GY---ECDVLGK---------------DILLCDPIP 63 (156)
T ss_dssp STTCEEEECSSCSS---EEEEEEEEECCTTTEEEEECTT-----SC---EEEEETT---------------TEEEECCSC
T ss_pred hhccEEEEEcCCCC---cccccEEEEeccCCEEEEEEcC-----CC---eeEeecc---------------ceEEEeccC
Confidence 58999988877664 4889999985 56889999876 21 1223211 122 4544
Q ss_pred CCCCCCCCcCCCCEEEEeeCCCee-EEEEEEEec-CCCCeEEEEECCcceEEEeecCCCcceeee
Q 044464 474 PDNREDLSLGIGTAVDAWWSDGWW-EGVVIGVDS-SSTDNLQVYLSGESLFLNVNKNDLRISRDW 536 (686)
Q Consensus 474 P~~~~~~~~~vGD~VDAw~~DGWW-eGVV~kv~~-~g~~ky~VyFpGe~del~f~~sdLRpsldW 536 (686)
. +..|=|--.+.+| .|+|..+.+ .++..|.|.+ ++..+.+..++++.+.+-
T Consensus 64 ~----------~~~V~A~~~ddy~s~giI~~h~~~~~e~~Y~Ve~--~G~t~~~~~~dI~LS~eQ 116 (156)
T 1ssf_A 64 L----------DTEVTALSEDEYFSAGVVKGHRKESGELYYSIEK--EGQRKWYKRMAVILSLEQ 116 (156)
T ss_dssp S----------SEEEEESSCTTTCEEEEEEEEEEETTEEEEEEEE--TTEEEEECGGGEEEEHHH
T ss_pred C----------CcEEEEccCCccccccEEEeecCCCCcEEEEEEe--CCcEEEEEeeeEEECHHH
Confidence 3 3555555555544 567765443 3466899998 455566888888887654
No 104
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=74.19 E-value=4.4 Score=35.90 Aligned_cols=56 Identities=16% Similarity=0.219 Sum_probs=41.0
Q ss_pred CCCcCCCCEEEEeeCC-CeeEEEEEEE---e----c----CCCCeEEEEECCcceEEEeecCCCccee
Q 044464 479 DLSLGIGTAVDAWWSD-GWWEGVVIGV---D----S----SSTDNLQVYLSGESLFLNVNKNDLRISR 534 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D-GWWeGVV~kv---~----~----~g~~ky~VyFpGe~del~f~~sdLRpsl 534 (686)
...|.+||.|=|-..+ -||.|.|..- . . .....|.|+|-|+.+..-+...+|.|-.
T Consensus 4 ~~~~~~GdlVwaK~~gyP~WPa~V~~p~~~~~~~~~~~~~~~~~~~~V~FFg~~~~aWv~~~~l~p~~ 71 (109)
T 1h3z_A 4 RVNYKPGMRVLTKMSGFPWWPSMVVTESKMTSVARKSKPKRAGTFYPVIFFPNKEYLWTGSDSLTPLT 71 (109)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEECCGGGCCHHHHHTCCCSSSCEEEEEETTTTCCEEEEGGGEEECC
T ss_pred cccCCCCCEEEEEeCCcCCCCEEEcccHHHhHHhhccCCCCCCCEEEEEEcCCCCEEEECHHHeeeCC
Confidence 3568899999887665 8999999941 0 0 0257899999998776666777776654
No 105
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=73.55 E-value=6.2 Score=35.40 Aligned_cols=39 Identities=15% Similarity=0.128 Sum_probs=32.9
Q ss_pred CCcCCCCEEEEeeCCCeeEEEEEEEec-CCCCeEEEEECC
Q 044464 480 LSLGIGTAVDAWWSDGWWEGVVIGVDS-SSTDNLQVYLSG 518 (686)
Q Consensus 480 ~~~~vGD~VDAw~~DGWWeGVV~kv~~-~g~~ky~VyFpG 518 (686)
..|.+|+.|-+++.+-|+++.|+++.. .+...|.|.|.|
T Consensus 21 ~~f~vGekVl~~~~~~~YeAkIl~v~~~~~~~~Y~VHY~G 60 (102)
T 2f5k_A 21 PKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSG 60 (102)
T ss_dssp CSCCTTCEEEEESSSSEEEEEEEEEEEETTEEEEEEEETT
T ss_pred cccCCCCEEEEEECCEEEEEEEEEEEEcCCCcEEEEEeCC
Confidence 469999999999999999999999863 234478998888
No 106
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=73.24 E-value=17 Score=30.41 Aligned_cols=51 Identities=22% Similarity=0.311 Sum_probs=37.7
Q ss_pred CCcCCCCEEEEeeCCC-eeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcc
Q 044464 480 LSLGIGTAVDAWWSDG-WWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRI 532 (686)
Q Consensus 480 ~~~~vGD~VDAw~~DG-WWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRp 532 (686)
..|++|+-|=|-|.|| ..+|.|++|+ .....|.|.|....+ .-+.-++|++
T Consensus 12 ~~f~vGddVLA~wtDGl~Y~gtI~~V~-~~~gtC~V~F~D~s~-~w~~~kdi~~ 63 (66)
T 2eqj_A 12 CKFEEGQDVLARWSDGLFYLGTIKKIN-ILKQSCFIIFEDSSK-SWVLWKDIQT 63 (66)
T ss_dssp CCSCTTCEEEEECTTSCEEEEEEEEEE-TTTTEEEEEETTTEE-EEEETTTEEC
T ss_pred ccccCCCEEEEEEccCcEEEeEEEEEc-cCCcEEEEEEccCCE-EEEEeecccc
Confidence 5699999999976665 8999999997 456899999986433 2334455543
No 107
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=72.18 E-value=4.8 Score=32.62 Aligned_cols=33 Identities=33% Similarity=0.559 Sum_probs=23.9
Q ss_pred CCCCCCCCCCCcCCCCEEEEee--CCCeeEEEEEE
Q 044464 471 PTPPDNREDLSLGIGTAVDAWW--SDGWWEGVVIG 503 (686)
Q Consensus 471 P~PP~~~~~~~~~vGD~VDAw~--~DGWWeGVV~k 503 (686)
+..|.....-.|+.||.|.+.. ++|||.|.+..
T Consensus 14 dy~a~~~~ELs~~~Gd~i~v~~~~~~gWw~g~~~~ 48 (65)
T 2lj0_A 14 SYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRR 48 (65)
T ss_dssp CBCCSSTTBCCBCTTCEEEEEEECTTSEEEEEETT
T ss_pred eECCCCcCCcCCCCCCEEEEeEeCCCCEEEEEECC
Confidence 3334333457899999999975 67999998743
No 108
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=70.81 E-value=9 Score=32.06 Aligned_cols=46 Identities=7% Similarity=0.279 Sum_probs=36.2
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeC--CeEEEEeCcccCCCCCCcceEEEec
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ--KQMKVRYDDVQDEDGSGNLEEWIPV 450 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~--~ky~VeY~dL~deDgs~~L~EwV~~ 450 (686)
...|++|+-|-.+- . -|-.|+|+|++++. .+|.|+|.| ..+-||.-
T Consensus 11 ~~~f~vGddVLA~w-t---DGl~Y~gtI~~V~~~~gtC~V~F~D--------~s~~w~~~ 58 (66)
T 2eqj_A 11 ACKFEEGQDVLARW-S---DGLFYLGTIKKINILKQSCFIIFED--------SSKSWVLW 58 (66)
T ss_dssp CCCSCTTCEEEEEC-T---TSCEEEEEEEEEETTTTEEEEEETT--------TEEEEEET
T ss_pred cccccCCCEEEEEE-c---cCcEEEeEEEEEccCCcEEEEEEcc--------CCEEEEEe
Confidence 45799999998874 2 26789999999974 789999977 23568874
No 109
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=70.45 E-value=8.4 Score=37.10 Aligned_cols=50 Identities=18% Similarity=0.354 Sum_probs=41.9
Q ss_pred CcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcc
Q 044464 481 SLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRI 532 (686)
Q Consensus 481 ~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRp 532 (686)
..++|+.+=|.+ ++.|.-|+|+++. .++.+.|+|-+-|....+..++||+
T Consensus 65 ~~~~G~~c~a~~~~d~~wyRa~V~~~~--~~~~~~V~~vDyG~~~~v~~~~l~~ 116 (201)
T 4b9w_A 65 KAEIGRPCCAFFSGDGNWYRALVKEIL--PSGNVKVHFVDYGNVEEVTTDQLQA 116 (201)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEEC--TTSCEEEEETTTCCEEEECGGGEEE
T ss_pred CCCCCCEEEEEECCCCeEEEEEEEEEC--CCCeEEEEEEccCCEEEEEHHHhcc
Confidence 357899998876 4469999999985 4678999999888888899999986
No 110
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=69.10 E-value=20 Score=29.99 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=37.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
...|.+|+.|--+- .|- ...|+|.|.++. ..-|.|.|.+ +. +|.+...
T Consensus 7 ~~~~~vgd~VmaRW--~Gd-~~yYparI~Si~s~~~~Y~V~fKd--gT------~e~L~~k 56 (66)
T 2l8d_A 7 NRKYADGEVVMGRW--PGS-VLYYEVQVTSYDDASHLYTVKYKD--GT------ELALKES 56 (66)
T ss_dssp SSSSCSSCEEEEEC--TTS-SCEEEEEEEEEETTTTEEEEEETT--SC------EEEEEGG
T ss_pred ceEeecCCEEEEEc--CCC-ccceEEEEEEeccCCceEEEEecC--CC------EEeechh
Confidence 46899999999997 443 468999999986 3579999998 21 4677753
No 111
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=68.56 E-value=11 Score=38.82 Aligned_cols=52 Identities=17% Similarity=0.315 Sum_probs=40.5
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
...|++|.++|+.-... -..+..|||.++.+++++|.|+...+ .-..|++..
T Consensus 141 ~~~F~vGMKLEavD~~n--p~~icvATV~~v~g~rl~v~fDGw~~-----~~D~W~~~~ 192 (265)
T 2r58_A 141 ENLFKVGQKLEAVDKKN--PQLICCATVDAIKDDQIHVTFDGWRG-----AFDYWCNYR 192 (265)
T ss_dssp SCCCCTTCEEEEECTTS--TTCEEEEEEEEEETTEEEEEETTSCG-----GGCEEEETT
T ss_pred ccccccCcEEEeccCCC--CCCEEEEEEEEecCCEEEEEeCCCCC-----cCCEEEECC
Confidence 34699999999975443 24678999999999999999987743 235899863
No 112
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=68.45 E-value=7 Score=29.95 Aligned_cols=25 Identities=20% Similarity=0.437 Sum_probs=20.9
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. +++||.|...
T Consensus 15 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 41 (58)
T 1jo8_A 15 NELTFVENDKIINIEFVDDDWWLGELE 41 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred CCcccCCCCEEEEEEecCCCcEEEEEC
Confidence 346799999999987 5899999865
No 113
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=67.95 E-value=7.2 Score=29.87 Aligned_cols=24 Identities=29% Similarity=0.968 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (58)
T 2bz8_A 16 DELTISVGEIITNIRKEDGGWWEGQI 41 (58)
T ss_dssp TBCCBCTTCEEEEEECCTTTEEEEEE
T ss_pred CEeeECCCCEEEEEEeCCCCEEEEEE
Confidence 356799999999987 589999985
No 114
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=67.92 E-value=8.5 Score=37.79 Aligned_cols=50 Identities=18% Similarity=0.354 Sum_probs=41.7
Q ss_pred CcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcc
Q 044464 481 SLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRI 532 (686)
Q Consensus 481 ~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRp 532 (686)
..++|+.+=|.+ ++.|.-|+|+++. .++.+.|+|-+-|....+..++||+
T Consensus 65 ~~~~G~~c~a~~~~d~~WyRa~V~~~~--~~~~~~V~~vDyGn~~~v~~~~l~~ 116 (226)
T 4b9x_A 65 KAEIGRPCCAFFSGDGNWYRALVKEIL--PSGNVKVHFVDYGNVEEVTTDQLQA 116 (226)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEEC--SSSEEEEECTTTCCEEEEEGGGEEC
T ss_pred CCCCCCEEEEEECCCCeEEEEEEEEEC--CCCeEEEEEEecCCEEEEEHHHhcc
Confidence 356899998876 4569999999985 4678999999888888888898886
No 115
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=67.68 E-value=78 Score=29.33 Aligned_cols=97 Identities=18% Similarity=0.165 Sum_probs=60.9
Q ss_pred CCCEEEEEecCCcceeeEEEEEEEE-eeCCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCCCCCC
Q 044464 398 VNAKIELLCQDSGIRGCWFRCIVLQ-VSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPTPPDN 476 (686)
Q Consensus 398 vG~~VEV~S~EeGfrGsWF~AtVIk-~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~PP~~ 476 (686)
.|.+|=.+--+. |-||+++|.+ ..+++|+|.++|= . +-.|.+. +|=
T Consensus 7 ~G~rV~AkWsdn---~~yYpG~V~~~~~~~ky~V~FdDg-----~---~~~v~~k----------------~ii------ 53 (123)
T 2g3r_A 7 VGLRVVAKWSSN---GYFYSGKITRDVGAGKYKLLFDDG-----Y---ECDVLGK----------------DIL------ 53 (123)
T ss_dssp TTCEEEEECTTT---CCEEEEEEEEEEETTEEEEEETTS-----C---EEEEEGG----------------GEE------
T ss_pred cceEEEEEeccC---CcCcccEEEEeccCCeEEEEEcCC-----C---eeEeecc----------------eEE------
Confidence 677787776544 4699999988 5789999998872 1 1123321 111
Q ss_pred CCCCCcCCCCEEEEeeCCCee-EEEEEEEecC-CCCeEEEEECCcceEEEeecCCC
Q 044464 477 REDLSLGIGTAVDAWWSDGWW-EGVVIGVDSS-STDNLQVYLSGESLFLNVNKNDL 530 (686)
Q Consensus 477 ~~~~~~~vGD~VDAw~~DGWW-eGVV~kv~~~-g~~ky~VyFpGe~del~f~~sdL 530 (686)
...++.+|..|=|.-.|.+. .|+|..+... ++..|.|...|+ ...+.++++
T Consensus 54 -v~d~ip~g~~V~A~teddy~~~GiI~~~k~~~~e~~Y~Ve~dG~--~~~~~~~~v 106 (123)
T 2g3r_A 54 -LCDPIPLDTEVTALSEDEYFSAGVVKGHRKESGELYYSIEKEGQ--RKWYKRMAV 106 (123)
T ss_dssp -CCSSCCTTCEEEEECTTSCEEEEEEEEEEEETTEEEEEEEETTE--EEEEEGGGE
T ss_pred -EecccCCCcEEEEeecCccccceEEEEEecCCCeEEEEEEeCCc--EEEEEeeeE
Confidence 01223368888888877655 6888866532 445789997544 444555544
No 116
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.18 E-value=6.8 Score=31.90 Aligned_cols=24 Identities=21% Similarity=0.545 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEeeC---CCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWWS---DGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~---DGWWeGVV 501 (686)
..-.|+.||.|.+... +|||.|.+
T Consensus 29 ~eLsf~~Gd~i~v~~~~~~~gWw~g~~ 55 (76)
T 2csi_A 29 AELTFCTGDIITVFGEIDEDGFYYGEL 55 (76)
T ss_dssp TSCCCCTTCEEEEESSCCSSSEEEEEE
T ss_pred CcccCCCCCEEEEeEecCCCCeEEEEE
Confidence 4567999999999875 48999975
No 117
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=67.08 E-value=7.5 Score=30.06 Aligned_cols=24 Identities=25% Similarity=0.468 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 19 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 44 (60)
T 1w70_A 19 LELNFKAGDVIFLLSRINKDWLEGTV 44 (60)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CCccCCCCCEEEEEEeCCCCeEEEEE
Confidence 346799999999977 689999984
No 118
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=66.90 E-value=7.8 Score=29.58 Aligned_cols=24 Identities=25% Similarity=0.712 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (58)
T 1uti_A 16 DELGFRSGEVVEVLDSSNPSWWTGRL 41 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCCCCCCCCEEEEEEECCCCEEEEEE
Confidence 346799999999987 579999986
No 119
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=66.89 E-value=7.8 Score=29.81 Aligned_cols=24 Identities=29% Similarity=0.706 Sum_probs=20.1
Q ss_pred CCCCcCCCCEEEEee----CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW----SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~----~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 45 (60)
T 1oot_A 18 GDLPFRKGDVITILKKSDSQNDWWTGRV 45 (60)
T ss_dssp TBCCBCTTCEEEEEECCSCTTSEEEEEE
T ss_pred CEeeEcCCCEEEEEEeCCCCCCeEEEEE
Confidence 346799999999986 479999986
No 120
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.87 E-value=5.9 Score=32.23 Aligned_cols=24 Identities=25% Similarity=0.459 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee---CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW---SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~---~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|.+
T Consensus 29 ~eLsf~~Gd~i~v~~~~~~~gWw~g~~ 55 (75)
T 2ege_A 29 GRLALRAGDVVMVYGPMDDQGFYYGEL 55 (75)
T ss_dssp CBCCBCTTCEEEEESCCCTTCEEEEES
T ss_pred CcceECCCCEEEEeEccCCCCEEEEEE
Confidence 356799999999984 689999986
No 121
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=66.40 E-value=11 Score=35.39 Aligned_cols=48 Identities=13% Similarity=0.069 Sum_probs=37.4
Q ss_pred CcCCCCEEEEee--CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcc
Q 044464 481 SLGIGTAVDAWW--SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRI 532 (686)
Q Consensus 481 ~~~vGD~VDAw~--~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRp 532 (686)
.+++|+.+=|.+ ++.|.-|+|+++. +++.+.|+|-+-|....+ ++||+
T Consensus 47 ~~~~G~~c~A~~~~d~~wyRa~I~~~~--~~~~~~V~fvDyGn~~~v--~~lr~ 96 (169)
T 3ntk_A 47 DLKEGALCVAQFPEDEVFYRAQIRKVL--DDGKCEVHFIDFGNNAVT--QQFRQ 96 (169)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEEC--STTCEEEEETTTTEEEEE--SCEEC
T ss_pred CCCCCCEEEEEECCCCcEEEEEEEEEC--CCCEEEEEEEecCCeEEh--hhhhc
Confidence 588999999976 6789999999985 455899999865555443 67775
No 122
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=65.49 E-value=11 Score=42.00 Aligned_cols=100 Identities=13% Similarity=0.117 Sum_probs=67.4
Q ss_pred eeeEEEEEEEEee-CCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCCCCCCCCCCCcCCCCEEEE
Q 044464 412 RGCWFRCIVLQVS-QKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPTPPDNREDLSLGIGTAVDA 490 (686)
Q Consensus 412 rGsWF~AtVIk~~-~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~PP~~~~~~~~~vGD~VDA 490 (686)
.+..+.+.|..+. ...++|+..+-... -..|.+.+...- + ..-|.|+ ...+.+|+.+=|
T Consensus 361 ~~~~~~V~Vt~V~sp~~Fyvq~~~~~~~--l~~l~~~l~~~~-----------~---~~~~l~~----~~~~~~G~~c~a 420 (570)
T 3bdl_A 361 SASYKPVFVTEITDDLHFYVQDVETGTQ--LEKLMENMRNDI-----------A---SHPPVEG----SYAPRRGEFCIA 420 (570)
T ss_dssp CCCCEEEEEEEECTTSEEEEEEGGGHHH--HHHHHHHHHHHH-----------H---HSCCCTT----CCCCCTTCEEEE
T ss_pred CCcEEEEEEEEEECCCeEEEEECCcHHH--HHHHHHHHHHHH-----------h---cCCCCCC----CcCCCcCCEEEE
Confidence 4678888888874 58899997663210 001111111100 0 0111111 245789999999
Q ss_pred ee-CCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 491 WW-SDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 491 w~-~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
.+ ++.|.-++|+++. ..+.+.|+|-+-|....+..++||+-
T Consensus 421 ~~~d~~wyRa~I~~v~--~~~~~~V~fvDyGn~e~v~~~~Lr~l 462 (570)
T 3bdl_A 421 KFVDGEWYRARVEKVE--SPAKIHVFYIDYGNREVLPSTRLGTL 462 (570)
T ss_dssp ECTTSCEEEEEEEEEE--ETTEEEEEETTTCCEEEECGGGEECC
T ss_pred EECCCCEEEEEEEEEc--CCCeEEEEEEeCCCeEEEEHHHCccC
Confidence 88 7899999999996 36899999998888888999999874
No 123
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=65.25 E-value=8.7 Score=30.44 Aligned_cols=26 Identities=15% Similarity=0.254 Sum_probs=21.5
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVIG 503 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~k 503 (686)
..-.|+.||.|.+.. +++||.|....
T Consensus 22 ~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~ 49 (68)
T 1tg0_A 22 DDLNFEKDQEIIVTSVEDAEWYFGEYQD 49 (68)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEEEC
T ss_pred CCCCCCCCCEEEEEEecCCCeEEEEECC
Confidence 346799999999976 67999998865
No 124
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=64.75 E-value=9.1 Score=29.28 Aligned_cols=24 Identities=33% Similarity=0.539 Sum_probs=20.1
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 1zx6_A 17 GDLGLKPGDKVQLLEKLSPEWYKGSC 42 (58)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CCccCCCCCEEEEEEecCCCEEEEEE
Confidence 346799999999976 689999985
No 125
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=64.65 E-value=9.3 Score=29.01 Aligned_cols=25 Identities=24% Similarity=0.458 Sum_probs=20.6
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. ++|||.|...
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~gW~~g~~~ 42 (58)
T 1zuy_A 16 SELPLKKGDVIYITREEPSGWSLGKLL 42 (58)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEES
T ss_pred CcCCCCCCCEEEEEEecCCCeEEEEEC
Confidence 346799999999976 5899999876
No 126
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=64.28 E-value=7.7 Score=30.12 Aligned_cols=23 Identities=30% Similarity=0.528 Sum_probs=19.8
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
..-.|+.||.|.+.. +++||.|.
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~Ww~g~ 44 (62)
T 1k4u_S 20 EDLEFQEGDIILVLSKVNEEWLEGE 44 (62)
T ss_dssp SBCCBCSSCEEEEEEESSSSCEEEE
T ss_pred CCccCCCCCEEEEEEeCCCCEEEEE
Confidence 456799999999987 68999998
No 127
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=64.05 E-value=8.9 Score=30.93 Aligned_cols=24 Identities=33% Similarity=0.767 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee----CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW----SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~----~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 17 ~eLs~~~Gd~i~vl~~~~~~~gWw~g~~ 44 (69)
T 2ydl_A 17 DELTIKEGDIVTLINKDCIDVGWWEGEL 44 (69)
T ss_dssp TBCCBCTTCEEEEEESCCSSTTEEEEEE
T ss_pred CccccCCCCEEEEEEcCCCCCCEEEEEE
Confidence 456799999999987 579999985
No 128
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=63.62 E-value=9.6 Score=29.36 Aligned_cols=24 Identities=29% Similarity=0.788 Sum_probs=20.3
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 45 (60)
T 2xmf_A 20 DELSFNANDIIDIIKEDPSGWWTGRL 45 (60)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 346799999999977 589999986
No 129
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=63.52 E-value=9.8 Score=28.96 Aligned_cols=24 Identities=25% Similarity=0.664 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 1sem_A 17 GELAFKRGDVITLINKDDPNWWEGQL 42 (58)
T ss_dssp TBCCBCTTCEEEEEECSSSSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 346799999999977 469999986
No 130
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=63.37 E-value=9.9 Score=29.38 Aligned_cols=24 Identities=21% Similarity=0.630 Sum_probs=20.1
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (61)
T 1y0m_A 18 DELTFTKSAIIQNVEKQDGGWWRGDY 43 (61)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCcCCcCCCEEEEEEecCCCEEEEEE
Confidence 356799999999977 689999965
No 131
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=63.13 E-value=67 Score=29.48 Aligned_cols=105 Identities=19% Similarity=0.338 Sum_probs=60.7
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeC-CeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCC
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPT 472 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~ 472 (686)
+.+++|+.|=.+.. -|-.|+|+|+.+.. ..|.|.++|=.- -..+.+..+ .. +.-.|=-
T Consensus 4 ~~v~vGq~V~akh~----ngryy~~~V~~~~~~~~y~V~F~DgS~-------s~dl~peDI-----vs-----~dc~~~G 62 (118)
T 2qqr_A 4 QSITAGQKVISKHK----NGRFYQCEVVRLTTETFYEVNFDDGSF-------SDNLYPEDI-----VS-----QDCLQFG 62 (118)
T ss_dssp SCCCTTCEEEEECT----TSSEEEEEEEEEEEEEEEEEEETTSCE-------EEEECGGGB-----CS-----SCHHHHC
T ss_pred ceeccCCEEEEECC----CCCEEeEEEEEEeeEEEEEEEcCCCCc-------cCCCCHhhc-----cc-----ccccccC
Confidence 46889999998765 46778999999754 567788875321 112221100 00 0111112
Q ss_pred CCCCCCCCCcCCCCEEEEeeCCCee-EEEEEEEecCCCCeEEEEECCcceEEEeecCCC
Q 044464 473 PPDNREDLSLGIGTAVDAWWSDGWW-EGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDL 530 (686)
Q Consensus 473 PP~~~~~~~~~vGD~VDAw~~DGWW-eGVV~kv~~~g~~ky~VyFpGe~del~f~~sdL 530 (686)
|| .+|+.|-+-|.||== .|+-.+.. ....|+|.|.... .+.+++.++
T Consensus 63 pP--------~~G~~V~V~W~DG~~y~a~f~g~~--~~~~Y~V~feDgs-~~~~kR~~i 110 (118)
T 2qqr_A 63 PP--------AEGEVVQVRWTDGQVYGAKFVASH--PIQMYQVEFEDGS-QLVVKRDDV 110 (118)
T ss_dssp CC--------CTTCEEEEECTTSCEEEEEEEEEE--EEEEEEEEETTSC-EEEECGGGE
T ss_pred CC--------CCCCEEEEEcCCCCEeeeEEecee--EEEEEEEEECCCC-EEEEcHHHe
Confidence 23 378999998877633 33333322 2457999998643 466665543
No 132
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=63.00 E-value=9.3 Score=30.60 Aligned_cols=24 Identities=33% Similarity=0.767 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee----CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW----SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~----~DGWWeGVV 501 (686)
..-.|+.||.|.+.. ++|||.|..
T Consensus 24 ~eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 51 (73)
T 2k9g_A 24 DELTIKEGDIVTLINKDCIDVGWWEGEL 51 (73)
T ss_dssp TBCCBCTTCEEEEEECCSSSTTEEEEEE
T ss_pred CeeeECCCCEEEEEECCCCCCCEEEEEE
Confidence 456799999999986 579999984
No 133
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=62.75 E-value=10 Score=30.85 Aligned_cols=26 Identities=35% Similarity=0.717 Sum_probs=21.5
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVIG 503 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~k 503 (686)
....|+.||.|.+.. +++||.|....
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~gWw~g~~~~ 49 (80)
T 1ue9_A 22 EQLSLAPGQLILILKKNTSGWWQGELQA 49 (80)
T ss_dssp TBCCCCTTCEEEEEEECSSSEEEEEECS
T ss_pred CCCCCCCCCEEEEEEecCCCcEEEEECC
Confidence 346799999999976 58999998763
No 134
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=62.27 E-value=11 Score=29.02 Aligned_cols=24 Identities=33% Similarity=0.842 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 19 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 44 (59)
T 2g6f_X 19 DELSFSKGDVIHVTRVEEGGWWEGTH 44 (59)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 356799999999976 689999974
No 135
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=62.20 E-value=11 Score=29.38 Aligned_cols=24 Identities=21% Similarity=0.606 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 45 (62)
T 1uj0_A 20 NELTFKHGELITVLDDSDANWWQGEN 45 (62)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCcCCCCCCEEEEEEeCCCCEEEEEE
Confidence 346799999999987 579999975
No 136
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=61.87 E-value=9.1 Score=29.77 Aligned_cols=24 Identities=25% Similarity=0.709 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEee---CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW---SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~---~DGWWeGVV 501 (686)
..-.|+.||.|.+.. ++|||.|..
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 42 (62)
T 2j6f_A 16 DELTIRVGEIIRNVKKLQEEGWLEGEL 42 (62)
T ss_dssp TBCCBCTTCEEEEEEECSSTTEEEEEE
T ss_pred CCcCCcCCCEEEEEEecCCCCEEEEEE
Confidence 356799999999976 589999984
No 137
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=61.70 E-value=12 Score=29.04 Aligned_cols=26 Identities=15% Similarity=0.396 Sum_probs=21.7
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVIG 503 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~k 503 (686)
..-.|+.||.|.+.. +++||.|....
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 43 (65)
T 2oaw_A 16 REVTMKKGDILTLLNSTNKDWWKVEVKI 43 (65)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEEEE
T ss_pred CCCCCCCCCEEEEEEcCCCCEEEEEEcc
Confidence 346799999999987 47999999874
No 138
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=61.61 E-value=10 Score=30.04 Aligned_cols=25 Identities=24% Similarity=0.554 Sum_probs=20.8
Q ss_pred CCCCcCCCCEEEEee---CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW---SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~---~DGWWeGVV~ 502 (686)
....|+.||.|.+.. ++|||.|...
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~ 48 (71)
T 2jt4_A 21 DELTIKSGDKVYILDDKKSKDWWMCQLV 48 (71)
T ss_dssp TBCCBCTTCEEEEEESSSCSSEEEEEET
T ss_pred CcccCCCCCEEEEEECCCCCCCEEEEEC
Confidence 346799999999987 6799999874
No 139
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=61.52 E-value=8.9 Score=30.20 Aligned_cols=23 Identities=30% Similarity=0.453 Sum_probs=19.3
Q ss_pred CCcCCCCEEEEee---CCCeeEEEEE
Q 044464 480 LSLGIGTAVDAWW---SDGWWEGVVI 502 (686)
Q Consensus 480 ~~~~vGD~VDAw~---~DGWWeGVV~ 502 (686)
-.|+.||.|.+.. ++|||.|...
T Consensus 25 Lsf~~Gd~i~v~~~~~~~gW~~g~~~ 50 (67)
T 3rnj_A 25 LSFKEGDLITLLVPEARDGWHYGESE 50 (67)
T ss_dssp CCBCTTCEEEECSSSCBTTEEEEEET
T ss_pred ccCCCCCEEEEeeccCCCCCEEEEEC
Confidence 6799999999983 5899999843
No 140
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=61.51 E-value=9.9 Score=29.48 Aligned_cols=24 Identities=21% Similarity=0.407 Sum_probs=19.5
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|.-
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (62)
T 2fpe_A 18 DELELEVDDPLLVELQAEDYWYEAYN 43 (62)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CcCcCCCCCEEEEEEecCCCEEEEEE
Confidence 346799999999964 579999974
No 141
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=61.34 E-value=11 Score=30.30 Aligned_cols=24 Identities=21% Similarity=0.583 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 43 (68)
T 2ew3_A 18 GELGFKEGDIITLTNQIDENWYEGMI 43 (68)
T ss_dssp TBCCBCTTCEEEEEEESSSSEEEEEE
T ss_pred CccCCCCCCEEEEEEecCCCEEEEEE
Confidence 356799999999976 689999985
No 142
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=60.94 E-value=9.7 Score=29.39 Aligned_cols=24 Identities=33% Similarity=0.776 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (60)
T 2gnc_A 21 RELSFKKGASLLLYHRASEDWWEGRH 46 (60)
T ss_dssp TBCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 346799999999977 589999986
No 143
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=60.77 E-value=12 Score=29.20 Aligned_cols=24 Identities=25% Similarity=0.760 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee----CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW----SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~----~DGWWeGVV 501 (686)
..-.|+.||.|.+.. ++|||.|..
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 48 (64)
T 2jte_A 21 DELTFREGEIIHLISKETGEAGWWKGEL 48 (64)
T ss_dssp SBCCBCTTCEEEEEESCSSSTTEEEEEE
T ss_pred CccCCCCCCEEEEEECCCCCCCEEEEEE
Confidence 456799999999985 479999984
No 144
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=60.75 E-value=12 Score=28.66 Aligned_cols=24 Identities=21% Similarity=0.538 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 43 (58)
T 1zlm_A 18 DELYFEEGDIIYITDMSDTNWWKGTS 43 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccCCCCCEEEEEEeCCCCEEEEEE
Confidence 356799999999986 579999975
No 145
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.73 E-value=11 Score=29.87 Aligned_cols=25 Identities=28% Similarity=0.747 Sum_probs=20.5
Q ss_pred CCCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 477 REDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 477 ~~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
...-.|+.||.|.+.. +++||.|..
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 2dl4_A 21 NEDLEMRPGDIITLLEDSNEDWWKGKI 47 (68)
T ss_dssp TTBCCCCTTCEEEEEECCCSSEEEEEC
T ss_pred cCCcCCCCCCEEEEEEeCCCCEEEEEE
Confidence 3456799999999987 589999983
No 146
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=60.72 E-value=9.2 Score=32.61 Aligned_cols=25 Identities=36% Similarity=0.816 Sum_probs=20.8
Q ss_pred CCCCcCCCCEEEEee-------CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW-------SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~-------~DGWWeGVV~ 502 (686)
....|+.||.|.+.. ++|||.|...
T Consensus 44 ~ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~ 75 (89)
T 2rf0_A 44 EELTLRRGDRVQVLSQDCAVSGDEGWWTGQLP 75 (89)
T ss_dssp TBCCBCTTCEEEEEECCHHHHSSTTEEEEECT
T ss_pred CccccCCCCEEEEEeccCCcccCCCEEEEEEC
Confidence 346799999999987 5899999863
No 147
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=60.31 E-value=12 Score=28.37 Aligned_cols=24 Identities=21% Similarity=0.599 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 2vwf_A 17 GELGFRRGDFIHVMDNSDPNWWKGAC 42 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCcCCCCCCEEEEEEcCCCCEEEEEE
Confidence 346799999999987 579999987
No 148
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=60.13 E-value=7.9 Score=33.11 Aligned_cols=24 Identities=29% Similarity=0.570 Sum_probs=20.5
Q ss_pred CCCCcCCCCEEEEe---eCCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAW---WSDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw---~~DGWWeGVV 501 (686)
....|+.||.|.+. .++|||.|.+
T Consensus 38 ~eLsf~~Gd~i~v~~~~~~~gWw~g~~ 64 (96)
T 1wie_A 38 AELPLTAGKYLYVYGDMDEDGFYEGEL 64 (96)
T ss_dssp TBCCCCTTCEEEEESSCCSSSCCEEEE
T ss_pred CeeeECCCCEEEEeEecCCCCEEEEEE
Confidence 34679999999999 5789999985
No 149
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=59.27 E-value=13 Score=28.95 Aligned_cols=24 Identities=33% Similarity=0.842 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (64)
T 2ak5_A 21 DELSFSKGDVIHVTRVEEGGWWEGTH 46 (64)
T ss_dssp TBCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred CcccCCCCCEEEEeEecCCCEEEEEE
Confidence 356799999999986 689999974
No 150
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=59.19 E-value=15 Score=28.92 Aligned_cols=24 Identities=21% Similarity=0.572 Sum_probs=20.1
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 2djq_A 22 GDLKFNKGDVILLRRQLDENWYQGEI 47 (68)
T ss_dssp TCCCCCTTCEEEEEECCCSSEEEEEE
T ss_pred CCccCCCCCEEEEEEecCCCEEEEEE
Confidence 456799999999977 579999984
No 151
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=59.07 E-value=29 Score=28.41 Aligned_cols=40 Identities=28% Similarity=0.294 Sum_probs=32.2
Q ss_pred CcCCCCEEEE-eeCCCeeEEEEEEEecCCCCeEEEEECCcce
Q 044464 481 SLGIGTAVDA-WWSDGWWEGVVIGVDSSSTDNLQVYLSGESL 521 (686)
Q Consensus 481 ~~~vGD~VDA-w~~DGWWeGVV~kv~~~g~~ky~VyFpGe~d 521 (686)
.|.+|+-|=| |.++-...|.|++|. ....+|.|.|....+
T Consensus 3 ~f~~GedVLarwsDG~fYlGtI~~V~-~~~~~clV~F~D~s~ 43 (58)
T 4hcz_A 3 RLWEGQDVLARWTDGLLYLGTIKKVD-SAREVCLVQFEDDSQ 43 (58)
T ss_dssp SCCTTCEEEEECTTSCEEEEEEEEEE-TTTTEEEEEETTSCE
T ss_pred ccccCCEEEEEecCCCEEeEEEEEEe-cCCCEEEEEEcCCCe
Confidence 4889999999 555569999999997 466799999986443
No 152
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=58.88 E-value=11 Score=29.11 Aligned_cols=24 Identities=33% Similarity=0.930 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 47 (65)
T 3u23_A 22 DELELKVGDIIDINEEVEEGWWSGTL 47 (65)
T ss_dssp TBCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 346799999999976 479999994
No 153
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=58.50 E-value=12 Score=29.52 Aligned_cols=23 Identities=30% Similarity=0.635 Sum_probs=19.6
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
....|+.||.|.+.. +++||.|.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~W~~g~ 46 (68)
T 2dl3_A 22 KELPLQKGDIVYIYKQIDQNWYEGE 46 (68)
T ss_dssp TBCCBCTTCEEEEEECCSTTEEEEE
T ss_pred CCccCCCCCEEEEeEecCCCEEEEE
Confidence 346799999999987 58999998
No 154
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=58.40 E-value=11 Score=30.53 Aligned_cols=25 Identities=20% Similarity=0.474 Sum_probs=20.5
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. +++||.|...
T Consensus 25 ~eLsf~~Gd~i~v~~~~~~~Ww~g~~~ 51 (76)
T 2ed1_A 25 DELTFIEGEVIIVTGEEDQEWWIGHIE 51 (76)
T ss_dssp SBCCCCSSCEEEESSCCSSSEEEEEET
T ss_pred CCcCcCCCCEEEEEEecCCCEEEEEEC
Confidence 356799999999976 6799999853
No 155
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=58.39 E-value=11 Score=29.92 Aligned_cols=24 Identities=33% Similarity=0.545 Sum_probs=19.4
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. ++|||.|..
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~gWw~g~~ 48 (67)
T 2eyx_A 23 TALALEVGELVKVTKINVSGQWEGEC 48 (67)
T ss_dssp SBCCBCSSEEEEEEEECTTSEEEEEE
T ss_pred CccccCCCCEEEEEEecCCCEEEEEE
Confidence 356799999999976 579999943
No 156
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=58.17 E-value=11 Score=29.94 Aligned_cols=24 Identities=29% Similarity=0.457 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (65)
T 2nwm_A 16 KELTLQKGDIVYIHKEVDKNWLEGEH 41 (65)
T ss_dssp TBCCBCTTCEEEEEECCTTTCEEEEE
T ss_pred CccCCcCCCEEEEEEecCCCEEEEEE
Confidence 356799999999987 479999983
No 157
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.06 E-value=9.9 Score=30.05 Aligned_cols=25 Identities=40% Similarity=0.730 Sum_probs=20.6
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
....|+.||.|.+.. +++||.|...
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~gW~~g~~~ 48 (70)
T 2ct3_A 22 DELELREGDRVDVMQQCDDGWFVGVSR 48 (70)
T ss_dssp TBCCBCTTEEEEEEEECSSSCEEEEES
T ss_pred CCccCCCCCEEEEEEECCCCEEEEEEC
Confidence 356799999999976 6899999875
No 158
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=57.85 E-value=14 Score=28.14 Aligned_cols=25 Identities=24% Similarity=0.554 Sum_probs=20.4
Q ss_pred CCCCcCCCCEEEEee---CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW---SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~---~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. +++||.|...
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~ 44 (60)
T 2v1q_A 17 DELTIKSGDKVYILDDKKSKDWWMCQLV 44 (60)
T ss_dssp TBCCBCTTCEEEEEESSSCSSEEEEEET
T ss_pred CCccCCCCCEEEEEeCCCCCCCEEEEEC
Confidence 346799999999986 5799999863
No 159
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=57.37 E-value=12 Score=31.63 Aligned_cols=23 Identities=22% Similarity=0.493 Sum_probs=19.7
Q ss_pred CCCCcCCCCEEEEee----CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW----SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~----~DGWWeGV 500 (686)
....|+.||.|.+.. ++|||.|.
T Consensus 20 ~eLsf~~Gd~i~v~~~~~~~~gWw~g~ 46 (93)
T 1uff_A 20 DEMSFNSGDIIQVDEKTVGEPGWLYGS 46 (93)
T ss_dssp SCCCBCTTCEEEECSSCCCSSSEEEEE
T ss_pred CCcCCCCCCEEEEeEccCCCCCEEEEE
Confidence 356799999999986 57999998
No 160
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=57.28 E-value=12 Score=29.93 Aligned_cols=25 Identities=28% Similarity=0.350 Sum_probs=20.7
Q ss_pred CCCCcCCCCEEEEe---eCCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAW---WSDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw---~~DGWWeGVV~ 502 (686)
..-.|+.||.|.+. .+++||.|...
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~~gWw~g~~~ 50 (72)
T 1spk_A 23 TLLSFAQGDVLTLLIPEEKDGWLYGEHD 50 (72)
T ss_dssp SBCCBCTTCEEEECCSSCBTTEEEEEET
T ss_pred CCCcCCCCCEEEEeEccCCCCcEEEEEC
Confidence 34679999999998 46899999764
No 161
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.98 E-value=14 Score=29.08 Aligned_cols=24 Identities=25% Similarity=0.451 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 1x2p_A 22 TQLSFLRGEKILILRQTTADWWWGER 47 (68)
T ss_dssp TBCCCCTTCEEEEEECCSSSEEEEEC
T ss_pred CCcCCCCCCEEEEEEcCCCCEEEEEE
Confidence 346789999999987 589999973
No 162
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=56.89 E-value=13 Score=29.26 Aligned_cols=26 Identities=23% Similarity=0.608 Sum_probs=21.1
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVIG 503 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~k 503 (686)
..-.|+.||.|.+.. +++||.|....
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 48 (67)
T 2o9s_A 21 VEMSFRKGERITLLRQVDENWYEGRIPG 48 (67)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEECTT
T ss_pred CccCCCCCCEEEEEEecCCCEEEEEECC
Confidence 346799999999976 58999997654
No 163
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=56.74 E-value=16 Score=27.47 Aligned_cols=24 Identities=21% Similarity=0.508 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEeeC---CCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWWS---DGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~---DGWWeGVV 501 (686)
..-.|+.||.|.+... ++||.|..
T Consensus 15 ~eLs~~~Gd~i~v~~~~~~~~W~~g~~ 41 (54)
T 2a28_A 15 DEISIDPGDIITVIRGDDGSGWTYGEC 41 (54)
T ss_dssp TBCCBCTTCEEEEEECCCSSSEEEEEE
T ss_pred CCccCCCCCEEEEEEecCCCCEEEEEE
Confidence 3567999999999874 58999987
No 164
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.68 E-value=15 Score=29.90 Aligned_cols=24 Identities=29% Similarity=0.785 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 32 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 57 (79)
T 1x69_A 32 DEISFDPDDIITNIEMIDDGWWRGVC 57 (79)
T ss_dssp SBCCCCTTCEEEEEEECSSSEEEEEE
T ss_pred CCcCcCCCCEEEEeEecCCCeEEEEE
Confidence 356799999999976 689999984
No 165
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=56.66 E-value=12 Score=29.74 Aligned_cols=24 Identities=33% Similarity=0.767 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee----CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW----SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~----~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 49 (70)
T 2da9_A 22 DELTIKEGDIVTLINKDCIDVGWWEGEL 49 (70)
T ss_dssp TBCCCCTTEEEEEEECCCSSTTEEEEEC
T ss_pred CEeeEcCCCEEEEEECCCCCCCeEEEEE
Confidence 456799999999986 579999984
No 166
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=56.63 E-value=13 Score=29.67 Aligned_cols=24 Identities=21% Similarity=0.407 Sum_probs=19.4
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. ++|||.|..
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~gW~~g~~ 46 (71)
T 2fpf_A 21 DELELEVDDPLLVELQAEDYWYEAYN 46 (71)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CcccCcCCcEEEEeEecCCCEEEEEE
Confidence 346799999999964 579999984
No 167
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=56.61 E-value=14 Score=29.18 Aligned_cols=24 Identities=29% Similarity=0.648 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEee-----CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW-----SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~-----~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~ 46 (69)
T 1wyx_A 18 DELSFRKGDIMTVLEQDTQGLDGWWLCSL 46 (69)
T ss_dssp TBCCBCTTCEEEEEETTGGGCTTEEEEEE
T ss_pred CccCCcCCCEEEEeECCCCCCCCcEEEEE
Confidence 346799999999987 479999973
No 168
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=56.44 E-value=13 Score=29.56 Aligned_cols=23 Identities=17% Similarity=0.417 Sum_probs=19.5
Q ss_pred CCCCcCCCCEEEEee---CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW---SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~---~DGWWeGV 500 (686)
..-.|+.||.|.+.. +++||.|.
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~~~Ww~g~ 51 (71)
T 1csk_A 26 QDLPFCKGDVLTIVAVTKDPNWYKAK 51 (71)
T ss_dssp TBCCBCTTCEEEEEEECSSTTEEEEE
T ss_pred CcCCCCCCCEEEEeECCCCCCCEEEE
Confidence 346799999999977 67999998
No 169
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.42 E-value=12 Score=30.03 Aligned_cols=24 Identities=33% Similarity=0.714 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee-----CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW-----SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~-----~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 23 ~eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~ 51 (73)
T 2dl7_A 23 DELSFPEGAIIRILNKENQDDDGFWEGEF 51 (73)
T ss_dssp TBCCBCTTCEEEEEECCCSSSSSCEEEEE
T ss_pred CcCCCCCCCEEEEEECCCCCCCCcEEEEE
Confidence 356799999999986 579999983
No 170
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=56.37 E-value=11 Score=30.03 Aligned_cols=23 Identities=35% Similarity=0.945 Sum_probs=19.3
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
..-.|+.||.|.+.. ++|||.|.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~gWw~g~ 40 (65)
T 2fei_A 16 DELELKVGDIIDINEEVEEGWWSGT 40 (65)
T ss_dssp TBCCCCTTCEEECCCCSSSSEEEEE
T ss_pred CccCCCCCCEEEEEEecCCCEEEEE
Confidence 356789999999987 58999996
No 171
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=56.35 E-value=15 Score=29.02 Aligned_cols=24 Identities=29% Similarity=0.727 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 28 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 53 (72)
T 4glm_A 28 NELDFEVGDKIRILATLEDGWLEGSL 53 (72)
T ss_dssp TBCCBCTTCEEEEEEECSTTEEEEEE
T ss_pred CcCCCCCCCEEEEEEccCCCEEEEEE
Confidence 346799999999976 679999993
No 172
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=56.24 E-value=15 Score=28.58 Aligned_cols=23 Identities=17% Similarity=0.537 Sum_probs=19.4
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
.-.|+.||.|.+.. +++||.|.+
T Consensus 37 eLsf~~Gd~i~v~~~~~~~Ww~g~~ 61 (62)
T 1g2b_A 37 EVTMKKGDILTLLNSTNKDWWKVEV 61 (62)
T ss_dssp BCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEEEEe
Confidence 46789999999987 479999975
No 173
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=55.88 E-value=14 Score=27.97 Aligned_cols=22 Identities=23% Similarity=0.568 Sum_probs=18.9
Q ss_pred CCCcCCCCEEEEee--CCCeeEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
.-.|+.||.|.+.. +++||.|.
T Consensus 17 eLs~~~Gd~i~v~~~~~~~Ww~g~ 40 (57)
T 1cka_A 17 DLPFKKGDILRIRDKPEEQWWNAE 40 (57)
T ss_dssp BCCBCTTCEEEEEECSSSSEEEEE
T ss_pred CCCCCCCCEEEEEEecCCCcEEEE
Confidence 46799999999987 47999997
No 174
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=55.79 E-value=12 Score=29.56 Aligned_cols=24 Identities=33% Similarity=0.702 Sum_probs=19.8
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (70)
T 2cuc_A 22 EELDLQKGEGIRVLGKYQDGWLKGLS 47 (70)
T ss_dssp TBCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred CcCCCCCCCEEEEEEecCCCeEEEEE
Confidence 456799999999977 479999973
No 175
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.68 E-value=12 Score=31.44 Aligned_cols=25 Identities=24% Similarity=0.533 Sum_probs=20.7
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
....|+.||.|.+.. +++||.|...
T Consensus 32 ~eLsf~~Gd~i~v~~~~~~~Ww~g~~~ 58 (90)
T 2yup_A 32 VELSFRKGEHICLIRKVNENWYEGRIT 58 (90)
T ss_dssp SBCCCCTTCEEEESSCCCSSEEEEECT
T ss_pred CcCCCCCCCEEEEEEEcCCCeEEEEEC
Confidence 346799999999987 5899999864
No 176
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=55.42 E-value=11 Score=29.79 Aligned_cols=24 Identities=25% Similarity=0.710 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (69)
T 2eqi_A 22 DELTFCRGALIHNVSKEPGGWWKGDY 47 (69)
T ss_dssp SCCCBCTTCEEESCCCCSSSCEEEEE
T ss_pred CccCCCCCCEEEEEEcCCCCeEEEEE
Confidence 456799999999974 689999984
No 177
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.29 E-value=14 Score=29.30 Aligned_cols=23 Identities=26% Similarity=0.771 Sum_probs=19.6
Q ss_pred CCCCcCCCCEEEEee-----CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW-----SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~-----~DGWWeGV 500 (686)
..-.|+.||.|.+.. +++||.|.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~ 49 (71)
T 2cre_A 22 DELAFSRGDILTILEQHVPESEGWWKCL 49 (71)
T ss_dssp SBCCCCSSCCEEEEESCCTTSTTEEEEE
T ss_pred CCCCCCCCCEEEEeEcCCCCCCCcEEEE
Confidence 356799999999986 58999998
No 178
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=55.22 E-value=16 Score=27.99 Aligned_cols=25 Identities=28% Similarity=0.481 Sum_probs=20.5
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. +++||.|...
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 47 (64)
T 4f14_A 21 DEVSFRDGDYIVNVQPIDDGWMYGTVQ 47 (64)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEET
T ss_pred CcCCCCCCCEEEEEEeCCCCeEEEEEC
Confidence 346799999999876 4799999874
No 179
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=54.92 E-value=14 Score=29.77 Aligned_cols=26 Identities=31% Similarity=0.654 Sum_probs=21.7
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVIG 503 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~k 503 (686)
....|+.||.|.+.. +++||.|....
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 49 (77)
T 2d8j_A 22 EDLSFRAGDKLQVLDTSHEGWWLARHLE 49 (77)
T ss_dssp SBCCBCTTCCEEEEECCSSSEEEEEECS
T ss_pred CccCCCCCCEEEEEECCCCCeEEEEECC
Confidence 356799999999987 57999998774
No 180
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.75 E-value=11 Score=31.88 Aligned_cols=24 Identities=25% Similarity=0.346 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEeeC------CCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWWS------DGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~------DGWWeGVV 501 (686)
....|+.||.|.+... +|||.|..
T Consensus 31 ~eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~ 60 (94)
T 2e5k_A 31 DELELVPGDFIFMSPMEQTSTSEGWIYGTS 60 (94)
T ss_dssp SBCCBCTTCEEEECGGGCCSTTTTEEEEEE
T ss_pred CCcCCCCCCEEEEEECcCCCCCCCcEEEEE
Confidence 3467999999999865 89999984
No 181
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.60 E-value=16 Score=30.40 Aligned_cols=24 Identities=21% Similarity=0.552 Sum_probs=20.1
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 32 ~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 57 (88)
T 1x2q_A 32 NELTFKHGEIIIVLDDSDANWWKGEN 57 (88)
T ss_dssp SCCCCCSSCEEEEEECSCSSSEEEEE
T ss_pred CccCCCCCCEEEEEEeCCCCEEEEEE
Confidence 356799999999987 479999975
No 182
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=54.60 E-value=12 Score=29.74 Aligned_cols=26 Identities=23% Similarity=0.608 Sum_probs=21.0
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVIG 503 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~k 503 (686)
....|+.||.|.+.. +++||.|....
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 49 (70)
T 2ecz_A 22 VEMSFRKGERITLLRQVDENWYEGRIPG 49 (70)
T ss_dssp TBCCCCTTCBCEEEEEEETTEEEEEETT
T ss_pred CCcCCCCCCEEEEEEecCCCeEEEEECC
Confidence 356789999999976 58999998653
No 183
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.57 E-value=16 Score=28.81 Aligned_cols=24 Identities=21% Similarity=0.538 Sum_probs=19.8
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 1x2k_A 22 DELYFEEGDIIYITDMSDTNWWKGTS 47 (68)
T ss_dssp TBCCCCSSCEEEEEECSCSSEEEEES
T ss_pred CcccCCCCCEEEEEEcCCCCEEEEEE
Confidence 356799999999986 579999974
No 184
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=54.55 E-value=14 Score=29.27 Aligned_cols=24 Identities=38% Similarity=0.638 Sum_probs=19.4
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. ++|||.|..
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 43 (67)
T 2bzy_A 18 TALALEVGDIVKVTRMNINGQWEGEV 43 (67)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CccccCCCCEEEEEEecCCCeEEEEe
Confidence 346799999999976 589999954
No 185
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.54 E-value=9.6 Score=32.57 Aligned_cols=23 Identities=22% Similarity=0.582 Sum_probs=19.3
Q ss_pred CCCcCCCCEEEEee---CCCeeEEEE
Q 044464 479 DLSLGIGTAVDAWW---SDGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~---~DGWWeGVV 501 (686)
.-.|+.||.|.+.. .+|||.|.+
T Consensus 41 eLsf~~Gd~i~vl~~~~~~gWw~g~~ 66 (97)
T 2csq_A 41 ELPFKEGQIIKVYGDKDADGFYRGET 66 (97)
T ss_dssp BCCBCTTCEEEEEEEECTTCEEEEEE
T ss_pred ccCCCCCCEEEEEEecCCCCeEEEEE
Confidence 46799999999983 478999986
No 186
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.48 E-value=14 Score=29.61 Aligned_cols=24 Identities=38% Similarity=0.778 Sum_probs=20.3
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 24 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 49 (72)
T 2dl8_A 24 RELSFKKGASLLLYQRASDDWWEGRH 49 (72)
T ss_dssp SBCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred CEeccCCCCEEEEEeecCCCEEEEEE
Confidence 346799999999976 589999987
No 187
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=54.21 E-value=16 Score=29.31 Aligned_cols=24 Identities=21% Similarity=0.561 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 28 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 53 (73)
T 3c0c_A 28 GELGFREGDLITLTNQIDENWYEGML 53 (73)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CCccCcCCCEEEEEEecCCCEEEEEE
Confidence 346799999999976 689999975
No 188
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=54.11 E-value=15 Score=29.88 Aligned_cols=25 Identities=32% Similarity=0.530 Sum_probs=20.7
Q ss_pred CCCCcCCCCEEEEeeC---CCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWWS---DGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~---DGWWeGVV~ 502 (686)
..-.|+.||.|.+... +|||.|...
T Consensus 33 ~eLsf~~Gd~i~v~~~~~~~gWw~g~~~ 60 (78)
T 1k1z_A 33 GFLRLNPGDIVELTKAEAEHNWWEGRNT 60 (78)
T ss_dssp CCCCBCTTCEEEEEECCSSCSCEEEEET
T ss_pred CccCCCCCCEEEEEEcCCCCCeEEEEEC
Confidence 4567999999999864 799999864
No 189
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=54.11 E-value=18 Score=28.53 Aligned_cols=24 Identities=29% Similarity=0.750 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 48 (69)
T 2dil_A 23 DELDLSAGDILEVILEGEDGWWTVER 48 (69)
T ss_dssp SSCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CccCCCCCCEEEEEECCCCCEEEEEE
Confidence 456799999999987 579999975
No 190
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=54.10 E-value=14 Score=29.08 Aligned_cols=25 Identities=28% Similarity=0.400 Sum_probs=20.7
Q ss_pred CCCCcCCCCEEEEee---CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW---SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~---~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. +++||.|...
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~ 49 (67)
T 2kxc_A 22 TLLSFAQGDVITLLIPEEKDGWLYGEHD 49 (67)
T ss_dssp SBCCBCTTCEEEESSSSCBTTEEEEEES
T ss_pred CCCcCCCCCEEEEeECCCCCCcEEEEEC
Confidence 346799999999984 6899999865
No 191
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.88 E-value=17 Score=28.76 Aligned_cols=23 Identities=26% Similarity=0.322 Sum_probs=18.9
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
..-.|+.||.|.+.. +++||.|.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~ 46 (68)
T 2dmo_A 22 EELQVMPGNIVFVLKKGNDNWATVM 46 (68)
T ss_dssp SSCCCCTTCEEEECEECSSSCEEEE
T ss_pred CCCCCCCCCEEEEEEeCCCCEEEEE
Confidence 456799999999965 57999995
No 192
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=53.69 E-value=17 Score=29.75 Aligned_cols=23 Identities=22% Similarity=0.365 Sum_probs=19.5
Q ss_pred CCCcCCCCEEEEeeC----CCeeEEEE
Q 044464 479 DLSLGIGTAVDAWWS----DGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~----DGWWeGVV 501 (686)
...|+.||.|.+... ++||.|..
T Consensus 33 eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 59 (81)
T 1x43_A 33 ELSLLADEVITVFSVVGMDSDWLMGER 59 (81)
T ss_dssp BCCCCTTCEEEEECCTTCCTTEEEEEE
T ss_pred cCCCCCCCEEEEEEcCCCCCCcEEEEE
Confidence 457899999999876 89999973
No 193
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=53.60 E-value=17 Score=28.51 Aligned_cols=25 Identities=20% Similarity=0.289 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. ++|||.|...
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~gW~~g~~~ 47 (65)
T 2j05_A 21 DEISFLKGDMFIVHNELEDGWMWVTNL 47 (65)
T ss_dssp SBCCBCTTCEEEEEEECTTSEEEEEET
T ss_pred CcCcCCCCCEEEEeEecCCCEEEEEEC
Confidence 356799999999975 6899999753
No 194
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=53.49 E-value=17 Score=28.89 Aligned_cols=25 Identities=28% Similarity=0.625 Sum_probs=20.7
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
....|+.||.|.+.. +++||.|...
T Consensus 30 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 56 (73)
T 3h0h_A 30 DDLSFHKGEKFQILNSSEGDWWEARSL 56 (73)
T ss_dssp TBCCBCTTCEEEEEECSSSSEEEEEET
T ss_pred CcceEeCCCEEEEEEecCCCeEEEEEC
Confidence 346799999999986 4799999874
No 195
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=53.26 E-value=13 Score=30.17 Aligned_cols=24 Identities=29% Similarity=0.538 Sum_probs=19.8
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~gWw~g~~ 51 (73)
T 2ebp_A 26 DSLKLKKGDIIDIISKPPMGTWMGLL 51 (73)
T ss_dssp SBCCBCSSCEEEEEECCSSSCEEEEC
T ss_pred CccCCCCCCEEEEEEeCCCCeEEEEE
Confidence 456799999999987 579999953
No 196
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=53.15 E-value=16 Score=28.84 Aligned_cols=25 Identities=24% Similarity=0.349 Sum_probs=20.5
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. ++|||.|...
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 44 (69)
T 1ruw_A 18 SELPLKKGDIVFISRDEPSGWSLAKLL 44 (69)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEET
T ss_pred CcccCCCCCEEEEEEecCCCeEEEEEC
Confidence 356799999999976 5799999765
No 197
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=53.03 E-value=16 Score=28.92 Aligned_cols=23 Identities=26% Similarity=0.595 Sum_probs=19.4
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
..-.|+.||.|.+.. +++||.|.
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~~Ww~g~ 42 (65)
T 1b07_A 18 EDLPFKKGDILRIRDKPEEQWWNAE 42 (65)
T ss_dssp TBCCBCTTCEEEEEECSSSSEEEEE
T ss_pred CccCCcCCCEEEEEEecCCCeEEEE
Confidence 346799999999987 47999997
No 198
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.94 E-value=13 Score=30.78 Aligned_cols=24 Identities=25% Similarity=0.309 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEee----CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW----SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~----~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|.+
T Consensus 23 ~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~ 50 (85)
T 2dlp_A 23 SLLSFHRGDLIKLLPVATLEPGWQFGSA 50 (85)
T ss_dssp SBCCBCTTCEEEECCCSCCCTTEEEEES
T ss_pred CCccCcCCCEEEEEEccCCCCCeEEEEE
Confidence 356799999999984 589999975
No 199
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=52.75 E-value=15 Score=29.45 Aligned_cols=24 Identities=21% Similarity=0.565 Sum_probs=20.1
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (73)
T 2dbm_A 22 GELGFKEGDIITLTNQIDENWYEGML 47 (73)
T ss_dssp TCCCBCTTCEEECCBCSSSSEEEEEE
T ss_pred CCccCCCCCEEEEEEecCCCEEEEEE
Confidence 456799999999976 689999975
No 200
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=52.45 E-value=13 Score=31.08 Aligned_cols=25 Identities=24% Similarity=0.540 Sum_probs=20.3
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. +++||.|.+.
T Consensus 34 ~eLsf~~GDiI~V~~~~~~gWw~G~~~ 60 (83)
T 2ke9_A 34 TALNVRAGDVITVLEQHPDGRWKGHIH 60 (83)
T ss_dssp TBCCBCTTCEEEESCSSCSSCEEEEEC
T ss_pred CcccccCCCEEEEEEecCCCeEEEEEC
Confidence 346799999999975 4699999965
No 201
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=52.40 E-value=20 Score=27.16 Aligned_cols=24 Identities=29% Similarity=0.797 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (58)
T 2drm_A 18 DELTFKEGDTIIVHQKDPAGWWEGEL 43 (58)
T ss_dssp TBCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 346799999999977 479999986
No 202
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=52.30 E-value=18 Score=29.37 Aligned_cols=24 Identities=13% Similarity=0.350 Sum_probs=19.8
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (78)
T 2yuo_A 22 DELGFRKNDIITIISQKDEHCWVGEL 47 (78)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccCCCCCEEEEEEecCCCEEEEEE
Confidence 356799999999986 689999873
No 203
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.11 E-value=16 Score=29.03 Aligned_cols=24 Identities=38% Similarity=0.664 Sum_probs=19.9
Q ss_pred CCCCCcCCCCEEEEee--CCCeeEEE
Q 044464 477 REDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 477 ~~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
.....|+.||.|.+.. +++||.|.
T Consensus 22 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~ 47 (70)
T 2ega_A 22 NSELSLQAGEVVDVIEKNESGWWFVS 47 (70)
T ss_dssp SSSCCCCTTCBCEEEEECTTSEEEEE
T ss_pred CCcccCCCCCEEEEEEccCCCeEEEE
Confidence 3456799999999976 68999996
No 204
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=52.09 E-value=18 Score=29.60 Aligned_cols=24 Identities=17% Similarity=0.520 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (80)
T 2pqh_A 17 REVTMKKGDILTLLNSTNKDWWKVEV 42 (80)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CccCCCCCCEEEEEEecCCCEEEEEE
Confidence 346789999999987 579999976
No 205
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.09 E-value=19 Score=29.51 Aligned_cols=24 Identities=25% Similarity=0.575 Sum_probs=19.6
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 23 ~eLs~~~Gd~i~vl~~~~~gWw~g~~ 48 (80)
T 2ekh_A 23 SEISFPAGVEVQVLEKQESGWWYVRF 48 (80)
T ss_dssp TSCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CccCcCCCCEEEEEEeCCCCeEEEEE
Confidence 356799999999976 579999973
No 206
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=51.92 E-value=19 Score=27.93 Aligned_cols=25 Identities=24% Similarity=0.606 Sum_probs=20.4
Q ss_pred CCCCcCCCCEEEEeeC-CCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWWS-DGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~-DGWWeGVV~ 502 (686)
..-.|+.||.|.+... ++||.|...
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~Ww~g~~~ 47 (65)
T 1w1f_A 22 DDLSFKKGEKMKVLEEHGEWWKAKSL 47 (65)
T ss_dssp SCCCBCTTCEEEEEEECSSEEEEEET
T ss_pred CcCCCCCCCEEEEEEcCCCEEEEEEC
Confidence 3567999999999665 899999873
No 207
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.61 E-value=31 Score=28.95 Aligned_cols=47 Identities=11% Similarity=0.072 Sum_probs=36.3
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
...|.+|+-|-++-.| |-.|.+||.+++ +.+++|+|.|= -+-|+...
T Consensus 7 ~~~f~eGqdVLarWsD----GlfYlGtV~kV~~~~~~ClV~FeD~--------s~~wv~~k 55 (68)
T 2e5p_A 7 GPRLWEGQDVLARWTD----GLLYLGTIKKVDSAREVCLVQFEDD--------SQFLVLWK 55 (68)
T ss_dssp CCCCCTTCEEEEECTT----SSEEEEEEEEEETTTTEEEEEETTT--------EEEEEETT
T ss_pred CcccccCCEEEEEecC----CcEEEeEEEEEecCCcEEEEEEccC--------Ceeeeeee
Confidence 3689999999887543 678999999987 57899998762 24677753
No 208
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=51.47 E-value=18 Score=27.35 Aligned_cols=22 Identities=50% Similarity=0.995 Sum_probs=18.4
Q ss_pred CCCCcCCCCEEEEee--CCCeeEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEG 499 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeG 499 (686)
..-.|+.||.|.+.. ++|||.|
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~W~~g 39 (58)
T 4e6r_A 16 DELSLVXGSRVTVMEXCSDGWWRG 39 (58)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEE
T ss_pred CEeeEeCCCEEEEeEcCCCCEEEE
Confidence 346799999999976 4699999
No 209
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.36 E-value=18 Score=29.43 Aligned_cols=23 Identities=39% Similarity=0.783 Sum_probs=19.4
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
...|+.||.|.+.. +++||.|..
T Consensus 33 eLsf~~Gd~i~v~~~~~~gWw~g~~ 57 (78)
T 2ed0_A 33 ELSFQEGAIIYVIKKNDDGWYEGVM 57 (78)
T ss_dssp BCCBCSSCEEEEEEECSSSEEEEEE
T ss_pred cccccCCCEEEEEEeCCCCEEEEEE
Confidence 46799999999976 579999983
No 210
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=51.32 E-value=30 Score=30.57 Aligned_cols=42 Identities=7% Similarity=-0.076 Sum_probs=33.7
Q ss_pred CCCCcCCCCEEEEeeCCCeeEEEEEEEecC-CCCeEEEEECCc
Q 044464 478 EDLSLGIGTAVDAWWSDGWWEGVVIGVDSS-STDNLQVYLSGE 519 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~DGWWeGVV~kv~~~-g~~ky~VyFpGe 519 (686)
....|.+|+.|=|++++-|.++.|+++... +...|.|.+.|-
T Consensus 22 ~~~~~~vG~kv~v~~~~~~yeAeIl~ir~~~g~~~YYVHY~g~ 64 (94)
T 2rnz_A 22 SVDDIIIKCQCWVQKNDEERLAEILSINTRKAPPKFYVHYVNY 64 (94)
T ss_dssp CGGGCCTTEEEEEECSSCEEEEEEEEEECSSSSCEEEEECTTS
T ss_pred ccccccCCCEEEEEECCEEEEEEEEEEEEcCCCcEEEEEeCCc
Confidence 345799999999999999999999998632 334788888773
No 211
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.23 E-value=21 Score=29.23 Aligned_cols=24 Identities=21% Similarity=0.648 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 25 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 50 (81)
T 2ysq_A 25 RELAFKAGDVIKVLDASNKDWWWGQI 50 (81)
T ss_dssp SSCCCCTTCEEEEEECCSSSEEEEEC
T ss_pred CcCCCCCCCEEEEEEEcCcCEEEEEE
Confidence 456799999999987 589999984
No 212
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=50.98 E-value=17 Score=27.63 Aligned_cols=24 Identities=25% Similarity=0.365 Sum_probs=19.3
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
.-.|+.||.|.+.. ++|||.|...
T Consensus 17 eLs~~~Gd~i~v~~~~~~gW~~g~~~ 42 (59)
T 1yn8_A 17 ELRLAEGDIVFISYKHGQGWLVAENE 42 (59)
T ss_dssp BCCBCTTCEEEEEEEEETTEEEEECT
T ss_pred CcCCCCCCEEEEEEcCCCCeEEEEEC
Confidence 46789999999855 6789999754
No 213
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=50.86 E-value=13 Score=33.07 Aligned_cols=25 Identities=28% Similarity=0.515 Sum_probs=21.2
Q ss_pred CCCCcCCCCEEEEeeC---CC--eeEEEEE
Q 044464 478 EDLSLGIGTAVDAWWS---DG--WWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~---DG--WWeGVV~ 502 (686)
..-.|+.||.|.+... +| ||.|.+.
T Consensus 37 ~ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~ 66 (108)
T 1i1j_A 37 RFLTIHRGQVVYVFSKLKGRGRLFWGGSVQ 66 (108)
T ss_dssp TBCCBCTTCEEEEEEEECGGGTTEEEEEEB
T ss_pred CccccCCCCEEEEEEecCCCCCCEEEEEEC
Confidence 3567999999999876 67 9999976
No 214
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.81 E-value=17 Score=28.76 Aligned_cols=25 Identities=20% Similarity=0.611 Sum_probs=20.5
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
....|+.||.|.+.. +++||.|...
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 49 (71)
T 2dnu_A 23 DEIGFEKGVTVEVIRKNLEGWWYIRYL 49 (71)
T ss_dssp TBCCBCTTCEEEECCCCSSSEEEEEET
T ss_pred CCCcCCCCCEEEEeECCCCCeEEEEEC
Confidence 346799999999976 5899999765
No 215
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=50.61 E-value=18 Score=28.64 Aligned_cols=23 Identities=22% Similarity=0.583 Sum_probs=19.4
Q ss_pred CCCCcCCCCEEEEeeC----CCeeEEE
Q 044464 478 EDLSLGIGTAVDAWWS----DGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~----DGWWeGV 500 (686)
..-.|+.||.|.+... +|||.|.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~~~Ww~g~ 47 (71)
T 1u5s_A 21 EELNFEKGETMEVIEKPENDPEWWKCK 47 (71)
T ss_dssp SBCCCCSSCCEEEEECCCTTTCEEEEE
T ss_pred CcccCCCCCEEEEEECCCCCCCCEEEE
Confidence 3467999999999874 7999997
No 216
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.08 E-value=18 Score=30.27 Aligned_cols=24 Identities=50% Similarity=0.818 Sum_probs=20.5
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 32 ~eLs~~~Gd~i~v~~~~~~gWw~g~~ 57 (88)
T 2cub_A 32 DELSLIKGTKVIVMEKCSDGWWRGSY 57 (88)
T ss_dssp TBCCCCTTEEEEEEEECTTSEEEEEE
T ss_pred CCcCCCCCCEEEEEEccCCCeEEEEE
Confidence 456799999999987 589999986
No 217
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=50.03 E-value=19 Score=28.27 Aligned_cols=23 Identities=26% Similarity=0.401 Sum_probs=19.5
Q ss_pred CCCCcCCCCEEEEeeC--CCeeEEE
Q 044464 478 EDLSLGIGTAVDAWWS--DGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~--DGWWeGV 500 (686)
..-.|+.||.|.+... ++||.|.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~g~ 41 (67)
T 1gl5_A 17 HDLRLERGQEYIILEKNDLHWWRAR 41 (67)
T ss_dssp SBCCBCTTCEEEEEECSSSSEEEEE
T ss_pred CeecCCcCCEEEEEEccCCCcEEEE
Confidence 3567999999999874 7999997
No 218
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=49.88 E-value=22 Score=28.52 Aligned_cols=23 Identities=13% Similarity=0.494 Sum_probs=19.7
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
..-.|+.||.|.+.. +++||.|.
T Consensus 14 ~eLs~~~Gd~i~v~~~~~~~Ww~g~ 38 (73)
T 2kxd_A 14 REVTMKKGDILTLLNSTNKDWWKVE 38 (73)
T ss_dssp CCCCBCTTCEEEEEECCSSSEEEEE
T ss_pred CEeeEcCCCEEEEEEecCCCEEEEE
Confidence 456799999999987 58999996
No 219
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=49.84 E-value=19 Score=28.39 Aligned_cols=24 Identities=21% Similarity=0.887 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (69)
T 4esr_A 21 DELTIHRGDIIRVFFKDNEDWWYGSI 46 (69)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CcCCCCCCCEEEEEEecCCCeEEEEe
Confidence 346799999999986 479999975
No 220
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=49.81 E-value=31 Score=32.00 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=27.6
Q ss_pred CCCEEEEeeCCC--eeEEEEEEEecCCCCeEEEEECCc
Q 044464 484 IGTAVDAWWSDG--WWEGVVIGVDSSSTDNLQVYLSGE 519 (686)
Q Consensus 484 vGD~VDAw~~DG--WWeGVV~kv~~~g~~ky~VyFpGe 519 (686)
+|.+|=|-|.+- |..|+|++.. ++++|.|.|...
T Consensus 7 ~G~rV~AkWsdn~~yYpG~V~~~~--~~~ky~V~FdDg 42 (123)
T 2g3r_A 7 VGLRVVAKWSSNGYFYSGKITRDV--GAGKYKLLFDDG 42 (123)
T ss_dssp TTCEEEEECTTTCCEEEEEEEEEE--ETTEEEEEETTS
T ss_pred cceEEEEEeccCCcCcccEEEEec--cCCeEEEEEcCC
Confidence 688888866554 9999999864 689999999863
No 221
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=55.26 E-value=3.5 Score=42.31 Aligned_cols=25 Identities=40% Similarity=0.665 Sum_probs=19.9
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVVIG 503 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV~k 503 (686)
.-.|+.||.|.+.. ++|||.|.+.+
T Consensus 255 eLs~~~Gd~i~v~~~~~~gWw~g~~~g 281 (303)
T 2lqn_A 255 ALALEVGDIVKVTRMNINGQWEGEVNG 281 (303)
Confidence 35788999999975 57999998644
No 222
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=49.63 E-value=4 Score=41.81 Aligned_cols=94 Identities=12% Similarity=0.104 Sum_probs=0.0
Q ss_pred ccccccccCCCCCCEEEEEecCCcceeeEEEEEEEEeeCCeEEEEeCcccCCCCCCcc----------------------
Q 044464 387 EFLPWYSAMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQKQMKVRYDDVQDEDGSGNL---------------------- 444 (686)
Q Consensus 387 ~~q~~~~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~~ky~VeY~dL~deDgs~~L---------------------- 444 (686)
..+....+.|++|+.|+|+...++ .|+.|+......+-+-..|-.+...-.....
T Consensus 157 ~~~~~~eLsf~~Gd~i~v~~~~~~---~Ww~g~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~~ss~~ss~s~p~p~s~p 233 (308)
T 3qwy_A 157 TGERETDLPFEQGERLEILSKTNQ---DWWEARNALGTTGLVPANYVQIQMEFHNDRTSKGASQSSIGSSGGGAERFSSA 233 (308)
T ss_dssp CCSSTTBCCBCTTCEEEEEECCSS---SEEEEECTTSCEEEEEGGGEEEC------------------------------
T ss_pred cCCCCCcCcCCCCCEEEEEEcCCC---CeEEEEeCCCCeeEecccccccccccccCccccccccCCCCCccccccccccc
Q ss_pred -------------eEEEecccccCCCccCCCCCCCCCcCCCCCCCC--CCCCcCCCCEEEEeeC--CCeeEEEE
Q 044464 445 -------------EEWIPVYKVAKPDKLGMRCSDRPTIRPTPPDNR--EDLSLGIGTAVDAWWS--DGWWEGVV 501 (686)
Q Consensus 445 -------------~EwV~~sr~a~pd~~g~R~~~R~~IRP~PP~~~--~~~~~~vGD~VDAw~~--DGWWeGVV 501 (686)
..... .+....|... ..-.|+.||.|.+.-. +|||+|.+
T Consensus 234 s~~sp~p~~~~~~~~~a~------------------alyd~~~~~~~~~ELs~~~Gd~i~v~~~~~~~ww~g~~ 289 (308)
T 3qwy_A 234 STSSDNIELQPRLPAKAK------------------VTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGMYKAEL 289 (308)
T ss_dssp --------------------------------------------------------------------------
T ss_pred cccCcccccccccccccc------------------cccccccccCCcccceeCCCCEEEEEEEcCCCcEEEEE
No 223
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.55 E-value=18 Score=29.48 Aligned_cols=23 Identities=35% Similarity=0.732 Sum_probs=19.4
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
....|+.||.|.+.. +++||.|.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~ 46 (79)
T 2yun_A 22 DELNLEKGDIVIIHEKKEEGWWFGS 46 (79)
T ss_dssp TBCCBCTTCEEEEEECCSSSCEEEE
T ss_pred CCcCCCCCCEEEEEEcCCCCEEEEE
Confidence 356799999999987 47999998
No 224
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=49.45 E-value=12 Score=29.55 Aligned_cols=23 Identities=35% Similarity=0.596 Sum_probs=19.6
Q ss_pred CCCcCCCCEEEEeeC---CCeeEEEE
Q 044464 479 DLSLGIGTAVDAWWS---DGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~---DGWWeGVV 501 (686)
.-.|+.||.|.+... ++||.|..
T Consensus 26 eLsf~~Gd~i~v~~~~~~~~Ww~g~~ 51 (70)
T 1gcq_C 26 FLRLNPGDIVELTKAEAEHNWWEGRN 51 (70)
T ss_dssp BCCBCTTCEEEEEECCTTCSEEEEEE
T ss_pred cCCcCCCCEEEEEeCCCCCCCeEEEe
Confidence 467999999999875 69999974
No 225
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=49.04 E-value=10 Score=31.66 Aligned_cols=23 Identities=26% Similarity=0.528 Sum_probs=19.3
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
...|+.||.|.+.. ++|||.|.+
T Consensus 34 eLsf~~Gd~I~Vl~~~~~gWw~g~~ 58 (79)
T 1z9q_A 34 ELNFKAGDVIFLLSRINKDWLEGTV 58 (79)
T ss_dssp BCCCCTTCCBCCCEESSSSEEEEEE
T ss_pred cccccCCCEEEEeEecCCCEEEEEE
Confidence 46789999999876 689999984
No 226
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=48.95 E-value=18 Score=32.22 Aligned_cols=25 Identities=32% Similarity=0.508 Sum_probs=20.9
Q ss_pred CCCCcCCCCEEEEee-------CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW-------SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~-------~DGWWeGVV~ 502 (686)
....|+.||.|.+.. ++|||.|...
T Consensus 59 dELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~ 90 (115)
T 1bb9_A 59 DELQLKAGDVVLVIPFQNPEEQDEGWLMGVKE 90 (115)
T ss_dssp TBCCBCTTCEEEEECCSCGGGCCTTEEEEEEH
T ss_pred CccCcCCCCEEEEeeccCCcccCCCeEEEEeC
Confidence 346799999999987 5799999875
No 227
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=48.84 E-value=26 Score=27.05 Aligned_cols=24 Identities=29% Similarity=0.759 Sum_probs=19.8
Q ss_pred CCCCcCCCCEEEEeeC--CCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWWS--DGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~--DGWWeGVV 501 (686)
..-.|+.||.|.+... ++||.|..
T Consensus 24 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 49 (65)
T 3ulr_B 24 DEISFDPDDIITNIEMIDDGWWRGVC 49 (65)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CEeeEecCCEEEEEEecCCCEEEEEE
Confidence 3467999999999774 79999984
No 228
>2l1t_A Uncharacterized protein; putative C-DI-GMP binding, GSU3033, PILZ, structural genomic biology, protein structure initiative; NMR {Geobacter sulfurreducens}
Probab=48.81 E-value=94 Score=28.23 Aligned_cols=86 Identities=15% Similarity=0.196 Sum_probs=54.7
Q ss_pred ccccCCCCCCEEEEEecCCcceeeEEE--EEEEEeeCCeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCC
Q 044464 391 WYSAMYKVNAKIELLCQDSGIRGCWFR--CIVLQVSQKQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPT 468 (686)
Q Consensus 391 ~~~~~FkvG~~VEV~S~EeGfrGsWF~--AtVIk~~~~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~ 468 (686)
.+...|.+|++|||----. .|-+|+ |.|..++++-+.++ +|
T Consensus 8 ~Y~~yF~~gqrv~V~ipL~--~~~~F~dwAiIt~~~~dli~lq------------------Ls----------------- 50 (109)
T 2l1t_A 8 EYGRYFEQLQKVNLTVRLG--DTGSFDGTAAITSLKGSLAWLE------------------LF----------------- 50 (109)
T ss_dssp SGGGTCCTTCEEEEEEEET--TTEEEEEEEEEEEEETTEEEEC------------------CS-----------------
T ss_pred HHHHhcCCCcEEEEEEEcC--CCCeEcCceEEEEecCCEEEEE------------------ee-----------------
Confidence 3567999999999963211 134444 55555666555544 22
Q ss_pred cCCCCCCCCCCCCcCCCCEEEEeeCCCe----eEEEEEEEecCCCCeEEEEECCc
Q 044464 469 IRPTPPDNREDLSLGIGTAVDAWWSDGW----WEGVVIGVDSSSTDNLQVYLSGE 519 (686)
Q Consensus 469 IRP~PP~~~~~~~~~vGD~VDAw~~DGW----WeGVV~kv~~~g~~ky~VyFpGe 519 (686)
|=.-|. +..+.+|..+|+-..-|| ..|+|+.. .++..++++|-|+
T Consensus 51 -rd~LP~---~v~l~~G~~l~v~~~~g~~~y~C~~iv~~~--~~~~~l~iRLvG~ 99 (109)
T 2l1t_A 51 -GAEQPP---PNTLSEGAEVSVSVWTGGALCRCDGRVETL--RDDRQFAIRLVGR 99 (109)
T ss_dssp -SSCCCC---TTTCCTTCEEEEEEEETTEEEEEEEECCSB--CSSSCEEEEEEEE
T ss_pred -cccCCC---ceeEecccEEEEEEccCCCEEEEEEEEEEe--cCCcEEEEEEeec
Confidence 222232 356889999998555554 56777765 4688999999874
No 229
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.73 E-value=65 Score=27.07 Aligned_cols=41 Identities=32% Similarity=0.418 Sum_probs=32.9
Q ss_pred CCcCCCCEEEEeeCCC-eeEEEEEEEecCCCCeEEEEECCcce
Q 044464 480 LSLGIGTAVDAWWSDG-WWEGVVIGVDSSSTDNLQVYLSGESL 521 (686)
Q Consensus 480 ~~~~vGD~VDAw~~DG-WWeGVV~kv~~~g~~ky~VyFpGe~d 521 (686)
..|.+|+-|=|-|.|| ...|.|.+|. ....++.|.|....+
T Consensus 8 ~~f~eGqdVLarWsDGlfYlGtV~kV~-~~~~~ClV~FeD~s~ 49 (68)
T 2e5p_A 8 PRLWEGQDVLARWTDGLLYLGTIKKVD-SAREVCLVQFEDDSQ 49 (68)
T ss_dssp CCCCTTCEEEEECTTSSEEEEEEEEEE-TTTTEEEEEETTTEE
T ss_pred cccccCCEEEEEecCCcEEEeEEEEEe-cCCcEEEEEEccCCe
Confidence 4689999999955555 6899999997 467889999986443
No 230
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=48.60 E-value=15 Score=29.60 Aligned_cols=24 Identities=33% Similarity=0.802 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 25 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 50 (76)
T 1ujy_A 25 DELSVCKGDIIYVTRVEEGGWWEGTL 50 (76)
T ss_dssp TSCCBCSSCCEEESSCCSSSCEEEEE
T ss_pred CcccCCCCCEEEEEEecCCCEEEEEE
Confidence 356799999999976 589999984
No 231
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=48.53 E-value=27 Score=33.57 Aligned_cols=44 Identities=20% Similarity=0.333 Sum_probs=32.9
Q ss_pred CCCCEEEEeeCC-Cee-EEEEEEEecCCCCeEEEEECCcceEEEeecCC
Q 044464 483 GIGTAVDAWWSD-GWW-EGVVIGVDSSSTDNLQVYLSGESLFLNVNKND 529 (686)
Q Consensus 483 ~vGD~VDAw~~D-GWW-eGVV~kv~~~g~~ky~VyFpGe~del~f~~sd 529 (686)
.+|..|=|-|.+ ++| .|+|+... ++++|.|.|.. +...++...+
T Consensus 10 ~iG~rVfArWsd~~yyYpG~V~~~~--~~~~Y~V~FdD-G~~k~v~~~d 55 (156)
T 1ssf_A 10 FVGLRVVAKWSSNGYFYSGKITRDV--GAGKYKLLFDD-GYECDVLGKD 55 (156)
T ss_dssp STTCEEEECSSCSSEEEEEEEEECC--TTTEEEEECTT-SCEEEEETTT
T ss_pred hhccEEEEEcCCCCcccccEEEEec--cCCEEEEEEcC-CCeeEeeccc
Confidence 689999996655 688 99999974 78999999985 3334444443
No 232
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A
Probab=48.43 E-value=11 Score=31.11 Aligned_cols=25 Identities=28% Similarity=0.517 Sum_probs=19.7
Q ss_pred CCCCCcCCCCEEEEee-----------------CCCeeEEEE
Q 044464 477 REDLSLGIGTAVDAWW-----------------SDGWWEGVV 501 (686)
Q Consensus 477 ~~~~~~~vGD~VDAw~-----------------~DGWWeGVV 501 (686)
...-.|+.||.|.+.. +.|||.|+.
T Consensus 19 ~~eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~ 60 (83)
T 3i5r_A 19 EEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYN 60 (83)
T ss_dssp TTBCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEE
T ss_pred CCccccCCCCEEEEeeccccccccccccccCCCCCccEEEEe
Confidence 3456799999999984 339999964
No 233
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=47.81 E-value=26 Score=26.85 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=19.5
Q ss_pred CCCCcCCCCEEEEee---CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW---SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~---~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~~W~~~~~ 46 (63)
T 3eg3_A 20 NTLSITKGEKLRVLGYNHNGEWCEAQT 46 (63)
T ss_dssp SBCCBCTTCEEEEEEECTTSSEEEEEE
T ss_pred CccCCCCCCEEEEEEeCCCCCeEEEEE
Confidence 346799999999986 356999976
No 234
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.71 E-value=19 Score=29.43 Aligned_cols=25 Identities=24% Similarity=0.459 Sum_probs=20.4
Q ss_pred CCCCcCCCCEEEEee-CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW-SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~-~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. +++||.|...
T Consensus 32 ~eLs~~~Gd~i~v~~~~~gW~~g~~~ 57 (79)
T 1x6b_A 32 DEVTLQQADVVLVLQQEDGWLYGERL 57 (79)
T ss_dssp SBCCCCTTEEEEEEEEETTEEEEEET
T ss_pred CCcCCCCCCEEEEEEeCCCEEEEEEC
Confidence 346789999999865 6899999874
No 235
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=47.65 E-value=18 Score=29.52 Aligned_cols=24 Identities=21% Similarity=0.649 Sum_probs=19.8
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 32 ~eLsf~~Gd~i~Vl~~~~~gWw~g~~ 57 (72)
T 2l0a_A 32 NELTFKAGEIITVLDDSDPNWWKGET 57 (72)
T ss_dssp TBCCBCTTCEEEEEEEEETTEEEEEC
T ss_pred CccCCCCCCEEEEEEecCCCEEEEEE
Confidence 346799999999976 579999974
No 236
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=47.41 E-value=22 Score=29.99 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=31.4
Q ss_pred CCcCCCCEEEEeeC----CCeeEEEEEEEecC-CCCeEEEEECC
Q 044464 480 LSLGIGTAVDAWWS----DGWWEGVVIGVDSS-STDNLQVYLSG 518 (686)
Q Consensus 480 ~~~~vGD~VDAw~~----DGWWeGVV~kv~~~-g~~ky~VyFpG 518 (686)
..|.+|+.|-+++. +-|.++.|+++... +...|.|.|.|
T Consensus 4 ~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~g 47 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYG 47 (76)
T ss_dssp CCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETT
T ss_pred cccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCC
Confidence 46899999999987 47999999998632 22368999988
No 237
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=47.28 E-value=19 Score=28.61 Aligned_cols=25 Identities=24% Similarity=0.635 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVIG 503 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~k 503 (686)
..-.|+.||.|.+ . ++|||.|....
T Consensus 25 ~eLs~~~Gd~i~v-~~~~~~Ww~g~~~~ 51 (72)
T 2kgt_A 25 EELSFRAGDVFHV-ARKEEQWWWATLLD 51 (72)
T ss_dssp TSCBCCTTCCEEE-EEECSSCEEEEEEC
T ss_pred CCcCCCCCCEEEE-eeCCCCEEEEEEcC
Confidence 3467899999999 5 58999998763
No 238
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=47.25 E-value=24 Score=28.79 Aligned_cols=23 Identities=17% Similarity=0.484 Sum_probs=19.8
Q ss_pred CCCcCCCCEEEEeeCC-------CeeEEEE
Q 044464 479 DLSLGIGTAVDAWWSD-------GWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D-------GWWeGVV 501 (686)
.-.|+.||.|.+.... +||.|..
T Consensus 24 ELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~ 53 (69)
T 1nm7_A 24 EVALKKGDLMAILSKKDPLGRDSDWWKVRT 53 (69)
T ss_dssp CCCCCTTCEEEECCSSSSSCCSSSCEEEEE
T ss_pred ccCCCCCCEEEEEecCCCCCCCCCeeEEEe
Confidence 5679999999998763 9999986
No 239
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=47.07 E-value=19 Score=28.72 Aligned_cols=22 Identities=32% Similarity=0.780 Sum_probs=18.7
Q ss_pred CCcCCCCEEEEee--CCCeeEEEE
Q 044464 480 LSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 480 ~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
-.|+.||.|.+.. +++||.|..
T Consensus 21 Ls~~~Gd~i~v~~~~~~~Ww~g~~ 44 (60)
T 2lx7_A 21 LRFAAGELITLLQVPDGGWWEGEK 44 (60)
T ss_dssp CCCCTTCEEEBSCCCTTSCEEEEC
T ss_pred ccCCCCCEEEEeEecCCCeEEEEe
Confidence 5799999999975 579999974
No 240
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.05 E-value=15 Score=30.02 Aligned_cols=23 Identities=30% Similarity=0.700 Sum_probs=19.8
Q ss_pred CCCcCCCCEEEEeeC----CCeeEEEE
Q 044464 479 DLSLGIGTAVDAWWS----DGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~----DGWWeGVV 501 (686)
...|+.||.|.+... ++||.|..
T Consensus 33 eLsf~~Gd~i~v~~~~~~~~~Ww~g~~ 59 (80)
T 2d8h_A 33 DLNFQAGDRITVISKTDSHFDWWEGKL 59 (80)
T ss_dssp BCEECTTCEEEEEECCSCSSSEEEEEE
T ss_pred eeeEcCCCEEEEeECcCCCCCeEEEEE
Confidence 457899999999875 79999987
No 241
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=46.92 E-value=26 Score=28.23 Aligned_cols=24 Identities=25% Similarity=0.498 Sum_probs=19.7
Q ss_pred CCCCcCCCCEEEEee---CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW---SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~---~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 25 ~eLs~~~Gd~i~v~~~~~~~gW~~g~~ 51 (77)
T 2enm_A 25 NELTVTEGEIITVTNPNVGGGWLEGKN 51 (77)
T ss_dssp SBCCCCTTCEEEEEESCCSSSEEEEEC
T ss_pred CeecCCCCCEEEEeEccCCCCeEEEEE
Confidence 346799999999985 489999973
No 242
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.67 E-value=19 Score=30.13 Aligned_cols=24 Identities=38% Similarity=0.638 Sum_probs=19.3
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|.+
T Consensus 33 ~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 58 (88)
T 2dbk_A 33 TALALEVGDIVKVTRMNINGQWEGEV 58 (88)
T ss_dssp SBCCBCTTCEEEEEEECTTSCEEEEC
T ss_pred CcccCCCCCEEEEEEecCCCEEEEEe
Confidence 346799999999976 579999943
No 243
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=46.50 E-value=27 Score=26.61 Aligned_cols=24 Identities=25% Similarity=0.538 Sum_probs=19.9
Q ss_pred CCCCcCCCCEEEEeeC--CCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWWS--DGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~--DGWWeGVV 501 (686)
..-.|+.||.|.+... ++||.|..
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~~~~ 46 (62)
T 3ngp_A 21 RELTVKKGDILTLLNSTNKDWWKIEV 46 (62)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccCCCCCEEEEeEecCCCeEEEEE
Confidence 3567999999999875 79999973
No 244
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=46.39 E-value=18 Score=28.38 Aligned_cols=24 Identities=29% Similarity=0.543 Sum_probs=19.5
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. ++|||.|..
T Consensus 25 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 50 (68)
T 1s1n_A 25 GDLTFKKGEILLVIEKKPDGWWIAKD 50 (68)
T ss_dssp SCCCBCSSEEEEECSCCSSSEEEEEC
T ss_pred CcCCCCCCCEEEEEEcCCCCeEEEEE
Confidence 356799999999976 479999983
No 245
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=46.18 E-value=25 Score=28.91 Aligned_cols=25 Identities=28% Similarity=0.625 Sum_probs=20.6
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. ++|||.|...
T Consensus 20 ~eLs~~~Gd~i~vl~~~~~~Ww~g~~~ 46 (79)
T 3cqt_A 20 DDLSFHKGEKFQILNSSEGDWWEARSL 46 (79)
T ss_dssp TBCCBCTTCEEEEEECTTSSEEEEEET
T ss_pred CcCCCCCCCEEEEEEecCCCeEEEEEC
Confidence 356799999999975 5799999874
No 246
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=45.68 E-value=26 Score=26.52 Aligned_cols=25 Identities=12% Similarity=0.233 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEeeC---CCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWWS---DGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~---DGWWeGVV~ 502 (686)
..-.|+.||.|.+... ++||.|...
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~~W~~g~~~ 43 (58)
T 1zuu_A 16 DEITITPGDKISLVARDTGSGWTKINND 43 (58)
T ss_dssp TBCCBCTTCCEEEEECCSSSSEEEEEET
T ss_pred CcccCCCCCEEEEeEcCCCCCCEEEEEC
Confidence 3467999999999864 599999863
No 247
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=45.40 E-value=25 Score=28.61 Aligned_cols=23 Identities=17% Similarity=0.412 Sum_probs=19.5
Q ss_pred CCCCcCCCCEEEEeeC------CCeeEEE
Q 044464 478 EDLSLGIGTAVDAWWS------DGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~------DGWWeGV 500 (686)
....|+.||.|.+... ++||.|.
T Consensus 28 ~eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~ 56 (79)
T 1uhc_A 28 NELSVSANQKLKILEFKDVTGNTEWWLAE 56 (79)
T ss_dssp SBCCBCTTCEEEEEESCCTTSCTTEEEEE
T ss_pred CccCCCCCCEEEEEECCCCCCCCCeEEEE
Confidence 3567999999999874 7999995
No 248
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=45.10 E-value=30 Score=31.13 Aligned_cols=38 Identities=11% Similarity=-0.005 Sum_probs=31.4
Q ss_pred CcCCCCEEEEeeCC---CeeEEEEEEEecCCCCeEEEEECCcce
Q 044464 481 SLGIGTAVDAWWSD---GWWEGVVIGVDSSSTDNLQVYLSGESL 521 (686)
Q Consensus 481 ~~~vGD~VDAw~~D---GWWeGVV~kv~~~g~~ky~VyFpGe~d 521 (686)
.|++|..+||-..- -+|.++|+++. +.++.|.|.|-..
T Consensus 13 ~F~~GMKLEAvD~~~p~~icvATV~~v~---g~rl~v~fDGw~~ 53 (107)
T 1wjq_A 13 GFQKKMKLEVVDKRNPMFIRVATVADTD---DHRVKVHFDGWNN 53 (107)
T ss_dssp SCCSSCEEEEECTTCTTCEEEEEEEEEC---SSCEEEECSSSCG
T ss_pred cCCCCCEEEEEcCCCCCcEEeEEEEEec---CCEEEEEeCCCCC
Confidence 49999999997654 59999999994 7899999998543
No 249
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=44.84 E-value=12 Score=29.46 Aligned_cols=23 Identities=39% Similarity=1.046 Sum_probs=19.1
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
..-.|+.||.|.+.. +++||.|.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~ 46 (68)
T 1wi7_A 22 DELELKVGDIIEVVGEVEEGWWEGV 46 (68)
T ss_dssp TBCCBCTTCEECCCEEEETTEEEEC
T ss_pred CCccCcCCCEEEEEEcCCCCeEEEE
Confidence 346789999999876 58999997
No 250
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=44.30 E-value=29 Score=27.49 Aligned_cols=23 Identities=17% Similarity=0.513 Sum_probs=19.4
Q ss_pred CCCCcCCCCEEEEeeC--CCeeEEE
Q 044464 478 EDLSLGIGTAVDAWWS--DGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~--DGWWeGV 500 (686)
....|..||.|.+... ++||.|.
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~Ww~g~ 44 (73)
T 3thk_A 20 REVTMKKGDILTLLNSTNKDWWKVE 44 (73)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEE
T ss_pred CccCCCCCCEEEEEECCCCCeEEEE
Confidence 3467999999999874 7999997
No 251
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=44.18 E-value=25 Score=28.77 Aligned_cols=24 Identities=13% Similarity=0.378 Sum_probs=19.0
Q ss_pred CCCCcCCCCEEEEee--CCC-eeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDG-WWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DG-WWeGVV 501 (686)
..-.|+.||.|.+.. +++ ||.|..
T Consensus 25 ~eLsf~~Gd~i~v~~~~~~~gWw~g~~ 51 (80)
T 2i0n_A 25 SLLPFKRNDIITITFKDQENKWFMGQL 51 (80)
T ss_dssp SSCCBCSSEEEEEEEESSSSSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCCEEEEEE
Confidence 356799999999977 345 999973
No 252
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=44.08 E-value=23 Score=29.72 Aligned_cols=23 Identities=13% Similarity=0.494 Sum_probs=19.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
....|..||.|.+.. ++|||.|.
T Consensus 32 ~eLsf~~Gd~i~Vl~~~~~gWw~g~ 56 (83)
T 1neg_A 32 REVTMKKGDILTLLNSTNKDWWKVE 56 (83)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEE
T ss_pred CccccCCCCEEEEEEecCCCEEEEE
Confidence 346799999999987 57999993
No 253
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.83 E-value=15 Score=29.72 Aligned_cols=24 Identities=29% Similarity=0.631 Sum_probs=20.1
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 25 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 50 (76)
T 2epd_A 25 QELSFRRGDVLRLHERASSDWWRGEH 50 (76)
T ss_dssp TBCEECTTCEEEEEEEEETTEEEEEE
T ss_pred CccCCCCCCEEEEEEeCCCCEEEEEE
Confidence 346789999999976 589999986
No 254
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=43.82 E-value=28 Score=28.98 Aligned_cols=23 Identities=22% Similarity=0.583 Sum_probs=19.3
Q ss_pred CCCCcCCCCEEEEeeC----CCeeEEE
Q 044464 478 EDLSLGIGTAVDAWWS----DGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~----DGWWeGV 500 (686)
....|+.||.|.+... ++||.|.
T Consensus 32 ~eLs~~~Gd~i~v~~~~~~~~~Ww~g~ 58 (91)
T 1wx6_A 32 EELNFEKGETMEVIEKPENDPEWWKCK 58 (91)
T ss_dssp SBCCCCTTCEEEEEECCSSCTTEEEEE
T ss_pred CcccCCCCCEEEEEECCCCCCCcEEEE
Confidence 3567999999999864 6999996
No 255
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=43.51 E-value=29 Score=26.73 Aligned_cols=24 Identities=25% Similarity=0.536 Sum_probs=19.3
Q ss_pred CCCCcCCCCEEEEee-CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW-SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~-~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|.-
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~Ww~g~~ 45 (62)
T 2iim_A 21 GDLGFEKGEQLRILEQSGEWWKAQS 45 (62)
T ss_dssp TBCCBCTTCEEEEEECCSSEEEEEE
T ss_pred CCcCCCCCCEEEEEEcCCCEEEEEE
Confidence 346799999999976 459999975
No 256
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=43.35 E-value=17 Score=29.24 Aligned_cols=23 Identities=39% Similarity=0.715 Sum_probs=18.9
Q ss_pred CCCCcCCCCEEEEee---CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW---SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~---~DGWWeGV 500 (686)
....|+.||.|.+.. +++||.|.
T Consensus 25 ~eLsf~~Gd~i~v~~~~~~~~Ww~g~ 50 (72)
T 1ugv_A 25 SELSFTAGTVFDNVHPSQEPGWLEGT 50 (72)
T ss_dssp SBCCBCTTCEEBSCCBCSSTTEEEEE
T ss_pred CEeCCcCCCEEEEEEecCCCCeEEEE
Confidence 356799999999864 57999997
No 257
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=43.29 E-value=27 Score=28.26 Aligned_cols=25 Identities=24% Similarity=0.363 Sum_probs=19.8
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. ++|||.|...
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~gWw~g~~~ 46 (73)
T 2lcs_A 20 NELRLAEGDIVFISYKHGQGWLVAENE 46 (73)
T ss_dssp TBCCBCTTCEEEEEEEETTTEEEEECT
T ss_pred CccCCcCCCEEEEEEEcCCCEEEEEEC
Confidence 346789999999854 6799999764
No 258
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=43.11 E-value=47 Score=29.11 Aligned_cols=41 Identities=7% Similarity=-0.079 Sum_probs=33.6
Q ss_pred CCCcCCCCEEEEeeCCCeeEEEEEEEecC-CCCeEEEEECCc
Q 044464 479 DLSLGIGTAVDAWWSDGWWEGVVIGVDSS-STDNLQVYLSGE 519 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~DGWWeGVV~kv~~~-g~~ky~VyFpGe 519 (686)
...|.+|+.|=|++++-|.++.|+++... +...|.|.+.|-
T Consensus 21 ~~~~~vG~kv~v~~~~~~y~AkIl~ir~~~~~~~YyVHY~g~ 62 (92)
T 2ro0_A 21 VDDIIIKCQCWVQKNDEERLAEILSINTRKAPPKFYVHYVNY 62 (92)
T ss_dssp TTSCCTTCEEEEEETTEEEEEEEEEEECSSSSCEEEEEETTS
T ss_pred cccccCCCEEEEEECCEEEEEEEEEEEEcCCCcEEEEEeCCc
Confidence 45699999999999999999999998632 345788888873
No 259
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=42.70 E-value=28 Score=32.02 Aligned_cols=24 Identities=33% Similarity=0.804 Sum_probs=20.0
Q ss_pred CCCCcCCCCEEEEee---CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW---SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~---~DGWWeGVV 501 (686)
..-.|+.||.|.+.. ++|||.|.+
T Consensus 20 ~ELsf~~Gd~i~Vl~~~~~~gWw~g~~ 46 (142)
T 2kbt_A 20 SELSLKEGDIIKILNKKGQQGWWRGEI 46 (142)
T ss_dssp SBCCCCTTCEEEEEECCCSSSEEEEEE
T ss_pred CcCCCCCCCEEEEEEecCCCCeEEEEE
Confidence 356799999999986 479999985
No 260
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=42.57 E-value=21 Score=28.38 Aligned_cols=23 Identities=26% Similarity=0.592 Sum_probs=18.7
Q ss_pred CCCCcCCCCEEEEee-CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW-SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~-~DGWWeGV 500 (686)
....|+.||.|.+.. +++||.|.
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~Ww~g~ 46 (69)
T 1uhf_A 23 GDLTFTEGEEILVTQKDGEWWTGS 46 (69)
T ss_dssp SBCCBCTTCEEEECEEETTEEEEC
T ss_pred CccCCCCCCEEEEEEeCCCEEEEE
Confidence 456799999999855 67999996
No 261
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.40 E-value=82 Score=26.12 Aligned_cols=43 Identities=28% Similarity=0.390 Sum_probs=35.0
Q ss_pred CCCCcCCCCEEEEeeCCC-eeEEEEEEEecCCCCeEEEEECCcce
Q 044464 478 EDLSLGIGTAVDAWWSDG-WWEGVVIGVDSSSTDNLQVYLSGESL 521 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~DG-WWeGVV~kv~~~g~~ky~VyFpGe~d 521 (686)
+...|.+|+-|=|-|.|| ...|.|++|. ....++.|.|....+
T Consensus 4 g~~~f~eGqdVLarWsDGlfYlgtV~kV~-~~~~~ClV~FeD~s~ 47 (63)
T 2e5q_A 4 GSSGLTEGQYVLCRWTDGLYYLGKIKRVS-SSKQSCLVTFEDNSK 47 (63)
T ss_dssp SCCCCCTTCEEEEECTTSCEEEEEECCCC-STTSEEEEEETTSCE
T ss_pred CccceecCCEEEEEecCCCEEEEEEEEEe-cCCCEEEEEEccCce
Confidence 456799999999977665 8999999996 467889999986544
No 262
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.25 E-value=31 Score=27.89 Aligned_cols=25 Identities=16% Similarity=0.561 Sum_probs=20.4
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVVIG 503 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV~k 503 (686)
...|+.||.|.+.. +++||.|....
T Consensus 25 eLs~~~Gd~i~vl~~~~~gWw~g~~~~ 51 (75)
T 2egc_A 25 TAGFQEGVSMEVLERNPNGWWYCQILD 51 (75)
T ss_dssp SCCBCTTCEEEECEECTTSEEEEEECC
T ss_pred cCCCCCCCEEEEEEcCCCCeEEEEeCC
Confidence 46799999999976 67899998753
No 263
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.23 E-value=23 Score=28.41 Aligned_cols=24 Identities=38% Similarity=0.847 Sum_probs=19.6
Q ss_pred CCCCcCCCCEEEEeeC----CCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWWS----DGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~----DGWWeGVV 501 (686)
..-.|+.||.|.+... ++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 49 (73)
T 2dm1_A 22 RELSLREGDVVRIYSRIGGDQGWWKGET 49 (73)
T ss_dssp TBCCBCTTCEEECCBSSSSSSSCEEEEE
T ss_pred CcCCCCCCCEEEEEEecCCCCCeEEEEE
Confidence 4567999999999874 39999974
No 264
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=42.09 E-value=30 Score=27.78 Aligned_cols=24 Identities=21% Similarity=0.534 Sum_probs=19.4
Q ss_pred CCCCcCCCCEEEEee-CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW-SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~-~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|..
T Consensus 25 ~eLs~~~Gd~i~v~~~~~~Ww~g~~ 49 (74)
T 1j3t_A 25 NHLNFSKHDIITVLEQQENWWFGEV 49 (74)
T ss_dssp TBCCBCTTCEEEEEEECSSEEEEES
T ss_pred CccCCCCCCEEEEEecCCCEEEEEE
Confidence 346799999999865 469999984
No 265
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=42.09 E-value=29 Score=29.90 Aligned_cols=47 Identities=11% Similarity=0.068 Sum_probs=37.4
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
...|..|+-|=++..| |-.|.+||++++ +.+|+|+|.|= -+-|+...
T Consensus 24 ~~~f~eGeDVLarwsD----GlfYLGTI~kV~~~~e~ClV~F~D~--------S~~W~~~k 72 (79)
T 2m0o_A 24 RPRLWEGQDVLARWTD----GLLYLGTIKKVDSAREVCLVQFEDD--------SQFLVLWK 72 (79)
T ss_dssp CCCCCTTCEEEBCCTT----SCCCEEEEEEEETTTTEEEEEETTS--------CEEEEETT
T ss_pred cceeccCCEEEEEecC----CCEEeEEEEEeccCCCEEEEEEcCC--------CeEEEEee
Confidence 4689999999998764 678999999986 57899999772 25688753
No 266
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=42.09 E-value=16 Score=33.79 Aligned_cols=105 Identities=17% Similarity=0.268 Sum_probs=62.3
Q ss_pred cCCCCCCEEEEEecCCcceeeEEEEEEEEeeC-CeEEEEeCcccCCCCCCcceEEEecccccCCCccCCCCCCCCCcCCC
Q 044464 394 AMYKVNAKIELLCQDSGIRGCWFRCIVLQVSQ-KQMKVRYDDVQDEDGSGNLEEWIPVYKVAKPDKLGMRCSDRPTIRPT 472 (686)
Q Consensus 394 ~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~~-~ky~VeY~dL~deDgs~~L~EwV~~sr~a~pd~~g~R~~~R~~IRP~ 472 (686)
..+++|+.|=.+.. -|-.|+|+|+.+.. ..|.|.|+|=.- -..+....+ .. +--.|=-
T Consensus 5 ~~v~vGq~V~ak~~----ngryy~~~V~~~~~~~~y~V~F~DgS~-------s~dl~PedI-----vs-----~dc~~~G 63 (123)
T 2xdp_A 5 KVISVGQTVITKHR----NTRYYSCRVMAVTSQTFYEVMFDDGSF-------SRDTFPEDI-----VS-----RDCLKLG 63 (123)
T ss_dssp CCCCTTCCCCCCCC----CCCCCCCEEEEEEEEEEEEEEETTSCE-------EEEECGGGB-----CS-----SCHHHHC
T ss_pred cccccCCEEEEECC----CCcEEeEEEEEEeeEEEEEEEcCCCCc-------cCCCCHhHc-----cc-----ccccccC
Confidence 46789999886643 38899999999864 568888886321 111211100 00 0011111
Q ss_pred CCCCCCCCCcCCCCEEEEeeCCCee-EEEEEEEecCCCCeEEEEECCcceEEEeecCCC
Q 044464 473 PPDNREDLSLGIGTAVDAWWSDGWW-EGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDL 530 (686)
Q Consensus 473 PP~~~~~~~~~vGD~VDAw~~DGWW-eGVV~kv~~~g~~ky~VyFpGe~del~f~~sdL 530 (686)
| -.+|+.|.+-|.||== .|+..+.. ....|+|.|... .++.+++.++
T Consensus 64 p--------P~~G~~V~V~W~DG~~y~a~f~g~~--~~~~YtV~FeDg-s~~~~kR~~i 111 (123)
T 2xdp_A 64 P--------PAEGEVVQVKWPDGKLYGAKYFGSN--IAHMYQVEFEDG-SQIAMKREDI 111 (123)
T ss_dssp C--------CCTTCEEEEECTTSCEEEEEEEEEE--EEEEEEEECTTS-CEEEEEGGGC
T ss_pred C--------CCCCCEEEEEcCCCCEEeEEEeeee--eEEEEEEEECCC-CeEEecHHHc
Confidence 2 2378999998876643 45555543 245799999864 4566666554
No 267
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=41.57 E-value=28 Score=26.48 Aligned_cols=24 Identities=25% Similarity=0.594 Sum_probs=19.2
Q ss_pred CCCCcCCCCEEEEeeC---CCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWWS---DGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~---DGWWeGVV 501 (686)
..-.|+.||.|.+... ++||.|..
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~~W~~g~~ 44 (60)
T 2x3w_D 18 DELSFKAGDELTKLGEEDEQGWCRGRL 44 (60)
T ss_dssp SBCCBCTTCEEEECSCCCSSSEEEEEC
T ss_pred CcccCCCCCEEEEEEccCCCCceEEEe
Confidence 3567999999999764 39999974
No 268
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.26 E-value=66 Score=26.68 Aligned_cols=47 Identities=17% Similarity=0.230 Sum_probs=35.8
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee--CCeEEEEeCcccCCCCCCcceEEEecc
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS--QKQMKVRYDDVQDEDGSGNLEEWIPVY 451 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~--~~ky~VeY~dL~deDgs~~L~EwV~~s 451 (686)
...|.+|+-|-++-. -|-.|.+||++++ +.+++|+|.|- + +-||...
T Consensus 5 ~~~f~eGqdVLarWs----DGlfYlgtV~kV~~~~~~ClV~FeD~-----s---~~wv~~k 53 (63)
T 2e5q_A 5 SSGLTEGQYVLCRWT----DGLYYLGKIKRVSSSKQSCLVTFEDN-----S---KYWVLWK 53 (63)
T ss_dssp CCCCCTTCEEEEECT----TSCEEEEEECCCCSTTSEEEEEETTS-----C---EEEEEGG
T ss_pred ccceecCCEEEEEec----CCCEEEEEEEEEecCCCEEEEEEccC-----c---eeEEEee
Confidence 357999999988733 2678999999987 57899998762 2 4688753
No 269
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=41.24 E-value=34 Score=29.35 Aligned_cols=24 Identities=33% Similarity=0.616 Sum_probs=20.1
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
.-.|+.||.|.+.. +++||.|...
T Consensus 43 eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 68 (109)
T 2yt6_A 43 DLSFKKGERFQIINNTEGDWWEARSI 68 (109)
T ss_dssp SCCCCTTCEEEEEECSCTTCEEEEES
T ss_pred ccCCCCCCEEEEEEccCCCcEEEEEC
Confidence 45789999999975 6899999864
No 270
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=39.87 E-value=32 Score=28.56 Aligned_cols=25 Identities=28% Similarity=0.581 Sum_probs=20.8
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
....|..||.|.+.. +++||.|...
T Consensus 21 ~eLsf~~Gd~i~vl~~~~~~Ww~g~~~ 47 (84)
T 4ag1_C 21 TDLSFHKGEKFQILEFGPGDWWEARSL 47 (84)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred CcccccCCCEEEEEEecCCCeEEEEEC
Confidence 346799999999987 4799999884
No 271
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=39.71 E-value=29 Score=27.10 Aligned_cols=22 Identities=14% Similarity=0.510 Sum_probs=18.6
Q ss_pred CCCcCCCCEEEEee--CCCeeEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
.-.|+.||.|.+.. +++||.|.
T Consensus 5 eLs~~~Gd~i~v~~~~~~~Ww~g~ 28 (63)
T 1tuc_A 5 EVTMKKGDILTLLNSTNKDWWKVE 28 (63)
T ss_dssp CCCBCTTCEEEEEECCSSSEEEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEEEE
Confidence 45689999999987 58999995
No 272
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=39.58 E-value=16 Score=31.31 Aligned_cols=25 Identities=36% Similarity=0.982 Sum_probs=20.8
Q ss_pred CCCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 477 REDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 477 ~~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
.....|+.||.|.+.- +++||.|..
T Consensus 32 ~~eLsf~~Gd~i~V~~~~~~gWw~g~~ 58 (92)
T 2o2o_A 32 DDELELKVGDIIEVVGEVEEGWWEGVL 58 (92)
T ss_dssp SSCCCBCSSCEEECCCGGGSSCBCCEE
T ss_pred CccccccCCCEEEEeEecCCCEEEEEE
Confidence 3456899999999987 589999985
No 273
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=45.75 E-value=6.2 Score=34.12 Aligned_cols=39 Identities=13% Similarity=0.114 Sum_probs=32.4
Q ss_pred CCcCCCCEEEEeeCCCeeEEEEEEEecC-CCCeEEEEECC
Q 044464 480 LSLGIGTAVDAWWSDGWWEGVVIGVDSS-STDNLQVYLSG 518 (686)
Q Consensus 480 ~~~~vGD~VDAw~~DGWWeGVV~kv~~~-g~~ky~VyFpG 518 (686)
..|.+|+.|-+++.+-|.++.|+++... +...|.|.|.|
T Consensus 11 ~~~~~Gekv~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~G 50 (85)
T 2lrq_A 11 TLFVDGERVLCFHGPLIYEAKVLKTKPDATPVEYYIHYAG 50 (85)
Confidence 3589999999999999999999998632 24578888888
No 274
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=39.43 E-value=36 Score=31.51 Aligned_cols=39 Identities=18% Similarity=0.299 Sum_probs=31.9
Q ss_pred CCcCCCCEEEEeeC-CCeeEEEEEEEec---CCCCeEEEEECC
Q 044464 480 LSLGIGTAVDAWWS-DGWWEGVVIGVDS---SSTDNLQVYLSG 518 (686)
Q Consensus 480 ~~~~vGD~VDAw~~-DGWWeGVV~kv~~---~g~~ky~VyFpG 518 (686)
..|.+|+.|-+++. +-|.++.|+++.. .+...|.|.|.|
T Consensus 11 ~~~~vGe~v~~~~~d~~~y~AkIl~i~~~~~~~~~~YyVHY~g 53 (133)
T 1wgs_A 11 VTVEIGETYLCRRPDSTWHSAEVIQSRVNDQEGREEFYVHYVG 53 (133)
T ss_dssp CCCCTTSEEEEEETTTEEEEEEEEEEEEETTTTEEEEEEECTT
T ss_pred cccCCCCEEEEEeCCCCEEEEEEEEEEeccCCCceEEEEeccC
Confidence 35889999999996 6999999999863 244578888888
No 275
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=38.69 E-value=18 Score=28.37 Aligned_cols=24 Identities=25% Similarity=0.357 Sum_probs=19.5
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
....|+.||.|.+.. +++||.|.-
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 48 (67)
T 1aww_A 23 NDLQLRKGDEYFILEESNLPWWRARD 48 (67)
T ss_dssp SSCCCCSSCEEECCCCCSSSEECCBC
T ss_pred CCccCCCCCEEEEEEccCCCcEEEEE
Confidence 456799999999976 579999973
No 276
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.48 E-value=19 Score=28.68 Aligned_cols=25 Identities=20% Similarity=0.249 Sum_probs=19.3
Q ss_pred CCCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 477 REDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 477 ~~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
...-.|+.||.|.+.. +++||.|..
T Consensus 22 ~~eLsf~~Gd~i~v~~~~~~~W~~g~~ 48 (71)
T 2gqi_A 22 TDEISFLKGDMFIVHNELEDGWMWVTN 48 (71)
T ss_dssp SSCCCCCTTCBCCCCEECSSSCEEEEC
T ss_pred CCCCCCCCCCEEEEEEecCCCEEEEEE
Confidence 3456788999988854 689999974
No 277
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=44.21 E-value=6.8 Score=36.03 Aligned_cols=49 Identities=20% Similarity=0.276 Sum_probs=38.7
Q ss_pred cCCCCEEEEeeCCCeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcc
Q 044464 482 LGIGTAVDAWWSDGWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRI 532 (686)
Q Consensus 482 ~~vGD~VDAw~~DGWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRp 532 (686)
+.+|..|=|=|.|+|.|..|.+|. -.-++.|+|........+...+++-
T Consensus 7 L~VGTeVSAKyrGAFCEAkIk~V~--r~vKcKV~~k~~~~~~~v~d~~ikG 55 (118)
T 2lcd_A 7 LTVGTDVSAKYRGAFCEAKIKTVK--RLVKVKVLLKQDNTTQLVQDDQVKG 55 (118)
Confidence 679999999999999999999985 4668889998655555565555543
No 278
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=37.89 E-value=30 Score=34.47 Aligned_cols=24 Identities=33% Similarity=0.491 Sum_probs=20.5
Q ss_pred CCCcCCCCEEEEee-------CCCeeEEEEE
Q 044464 479 DLSLGIGTAVDAWW-------SDGWWEGVVI 502 (686)
Q Consensus 479 ~~~~~vGD~VDAw~-------~DGWWeGVV~ 502 (686)
...|+.||.|.+.. ++|||.|.+.
T Consensus 158 ELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~ 188 (213)
T 1mv3_A 158 ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKE 188 (213)
T ss_dssp CCCBCSSCEEEECCCSCGGGSCTTEEEEEEH
T ss_pred cCCcCCCCEEEEeecCCCCccCCCeeEEEeC
Confidence 45799999999987 5799999875
No 279
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=37.81 E-value=32 Score=26.33 Aligned_cols=22 Identities=18% Similarity=0.394 Sum_probs=18.5
Q ss_pred CCCcCCCCEEEEee-CCCeeEEE
Q 044464 479 DLSLGIGTAVDAWW-SDGWWEGV 500 (686)
Q Consensus 479 ~~~~~vGD~VDAw~-~DGWWeGV 500 (686)
.-.|+.||.|.+.. +++||.|.
T Consensus 17 eLs~~~Gd~i~v~~~~~~Ww~~~ 39 (60)
T 1i07_A 17 ELSVMKDDVLEILDDRRQWWKVR 39 (60)
T ss_dssp BCCBCTTCEEEECGGGCCEEEEE
T ss_pred cccCCCCCEEEEEEcCCCeEEEE
Confidence 46789999999965 68999996
No 280
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=37.64 E-value=41 Score=26.84 Aligned_cols=24 Identities=17% Similarity=0.309 Sum_probs=19.5
Q ss_pred CCCCcCCCCEEEEee-CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW-SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~-~DGWWeGVV 501 (686)
..-.|+.||.|.+.. +++||.|..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~Ww~g~~ 46 (72)
T 2jw4_A 22 QELDIKKNERLWLLDDSKSWWRVRN 46 (72)
T ss_dssp TSCCCCTTCEEEEEECSSSSEEEEC
T ss_pred CcccCCCCCEEEEEECCCCEEEEEE
Confidence 356799999999976 469999974
No 281
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A
Probab=36.98 E-value=22 Score=29.94 Aligned_cols=25 Identities=32% Similarity=0.484 Sum_probs=19.7
Q ss_pred CCCCCcCCCCEEEEee---------------CC--CeeEEEE
Q 044464 477 REDLSLGIGTAVDAWW---------------SD--GWWEGVV 501 (686)
Q Consensus 477 ~~~~~~~vGD~VDAw~---------------~D--GWWeGVV 501 (686)
...-.|+.||.|.+.. .+ |||.|..
T Consensus 25 ~~ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~ 66 (90)
T 3o5z_A 25 PEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLN 66 (90)
T ss_dssp TTBCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEE
T ss_pred CCccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEe
Confidence 3456899999999983 24 9999985
No 282
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.52 E-value=43 Score=27.48 Aligned_cols=23 Identities=17% Similarity=0.371 Sum_probs=18.8
Q ss_pred CCCcCCCCEEEEee--CC-CeeEEEE
Q 044464 479 DLSLGIGTAVDAWW--SD-GWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~D-GWWeGVV 501 (686)
...|+.||.|.+.. ++ +||.|..
T Consensus 33 eLsf~~Gd~i~v~~~~~~~~Ww~g~~ 58 (81)
T 1x6g_A 33 ELAFRKGDVVTILEACENKSWYRVKH 58 (81)
T ss_dssp CCCBCTTCEEEEEECCCSSSEEEEEE
T ss_pred CCCCCCCCEEEEEeccCCCCeEEEEe
Confidence 46799999999977 34 9999973
No 283
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.16 E-value=33 Score=27.84 Aligned_cols=24 Identities=8% Similarity=0.209 Sum_probs=19.7
Q ss_pred CCCcCCCCEEEEeeC---CCeeEEEEE
Q 044464 479 DLSLGIGTAVDAWWS---DGWWEGVVI 502 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~---DGWWeGVV~ 502 (686)
...|+.||.|.+... ++||.|...
T Consensus 29 eLs~~~Gd~i~v~~~~~~~~Ww~g~~~ 55 (78)
T 2dl5_A 29 ELTIEEHEVLEVIEDGDMEDWVKARNK 55 (78)
T ss_dssp BCCBCSSEEEEEEECCSSSSEEEEECT
T ss_pred CCCCCCCCEEEEEeccCCCCcEEEEeC
Confidence 467899999999874 799999753
No 284
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=35.87 E-value=97 Score=30.26 Aligned_cols=51 Identities=18% Similarity=0.384 Sum_probs=39.2
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEEee---CCeEEEEeCcccCCCCCCcceE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS---QKQMKVRYDDVQDEDGSGNLEE 446 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~---~~ky~VeY~dL~deDgs~~L~E 446 (686)
...|.+|+.|=.+=-+ .-|.|+|+|+..- .+.|.|++++=.+++|..+..+
T Consensus 114 ~~~f~~G~~VLAlYP~---TT~FY~A~V~~~p~~~~~~y~L~FEdde~~dG~sp~~~ 167 (180)
T 3mea_A 114 EALFQKEQLVLALYPQ---TTCFYRALIHAPPQRPQDDYSVLFEDTSYADGYSPPLN 167 (180)
T ss_dssp GGSCCTTCEEEEECTT---SSEEEEEEEEECCSSTTCCEEEEEBCTTSTTSBCCCEE
T ss_pred cccCCCCCEEEEeCCC---CceeeEEEEecCCCCCCCcEEEEEcCCCccCCCCCCcE
Confidence 4679999999998555 5799999999863 3689999998766666544443
No 285
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=35.39 E-value=41 Score=27.92 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=0.0
Q ss_pred cCCCCCCCCCCCCcCCCCEEEEeeC-CCeeEEE
Q 044464 469 IRPTPPDNREDLSLGIGTAVDAWWS-DGWWEGV 500 (686)
Q Consensus 469 IRP~PP~~~~~~~~~vGD~VDAw~~-DGWWeGV 500 (686)
+-+..|.....-.|..||.|.+... ++||.|.
T Consensus 9 lydy~~~~~~eLs~~~Gd~i~v~~~~~~Ww~g~ 41 (90)
T 3reb_B 9 LYDYVSWSPDDLSFQKGDQMVVLEESGEWWKAR 41 (90)
T ss_dssp SSCBCCSSTTBCCBCTTCEEEEEECSSSEEEEE
T ss_pred CCccCcCCcCcCCCCCCCEEEEEEeCCCEEEEE
No 286
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=35.00 E-value=36 Score=27.33 Aligned_cols=24 Identities=17% Similarity=0.493 Sum_probs=19.2
Q ss_pred CCCCcCCCCEEEEeeC---CCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWWS---DGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~---DGWWeGVV 501 (686)
..-.|+.||.|.+... ++||.|..
T Consensus 24 ~eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 50 (74)
T 1gbq_A 24 DELSFKRGDILKVLNEECDQNWYKAEL 50 (74)
T ss_dssp TBCCBCTTCEEECCBCSSCSSEEEEEE
T ss_pred CeeeEcCCCEEEEeEecCCCCEEEEEE
Confidence 3467999999999774 48999984
No 287
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.68 E-value=51 Score=25.93 Aligned_cols=24 Identities=21% Similarity=0.309 Sum_probs=19.3
Q ss_pred CCCCcCCCCEEEEeeC---CCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWWS---DGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~---DGWWeGVV 501 (686)
..-.|+.||.|.+... +|||.|..
T Consensus 22 ~eLs~~~Gd~i~vl~~~~~~gW~~~~~ 48 (70)
T 2ct4_A 22 GTISMAEGEDLSLMEEDKGDGWTRVRR 48 (70)
T ss_dssp TCCCBCTTCEEEEEECCSSSCEEEEEC
T ss_pred CcCCCCCCCEEEEEeccCCCCeEEEEe
Confidence 3567999999999874 57999974
No 288
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=34.51 E-value=63 Score=28.88 Aligned_cols=39 Identities=13% Similarity=0.100 Sum_probs=31.2
Q ss_pred CCcCCCCEEEEee-----CCCeeEEEEEEEecC------CCCeEEEEECC
Q 044464 480 LSLGIGTAVDAWW-----SDGWWEGVVIGVDSS------STDNLQVYLSG 518 (686)
Q Consensus 480 ~~~~vGD~VDAw~-----~DGWWeGVV~kv~~~------g~~ky~VyFpG 518 (686)
..|.+|+.|=+|+ ..-|+++.|+++... +...|.|.|.|
T Consensus 18 ~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~G 67 (101)
T 3m9q_A 18 PLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQG 67 (101)
T ss_dssp CCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETT
T ss_pred CcccCCCEEEEEecCCCCCCcceEeEEEEEEecCCccccCceEEEEEeCC
Confidence 3488999999999 478999999999631 12478898887
No 289
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=34.08 E-value=39 Score=30.09 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=0.0
Q ss_pred cCCCCCCCCCCCCcCCCCEEEEee-CCCeeEEEE
Q 044464 469 IRPTPPDNREDLSLGIGTAVDAWW-SDGWWEGVV 501 (686)
Q Consensus 469 IRP~PP~~~~~~~~~vGD~VDAw~-~DGWWeGVV 501 (686)
+-..-+.....-.|+.||.|.+.. ++|||.|..
T Consensus 65 lydy~a~~~~eLsf~~Gd~i~vl~~~~gWw~g~~ 98 (119)
T 2rqr_A 65 IYNFQGSGAPQLSLQIGDVVRIQETCGDWYRGYL 98 (119)
T ss_dssp CSCBCCCSTTBCCBCTTCEEEEEEEETTEEEEEE
T ss_pred ccccCCCCCCcccCcCCCEEEEEEcCCCEEEEEE
No 290
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=33.69 E-value=54 Score=26.78 Aligned_cols=24 Identities=29% Similarity=0.576 Sum_probs=19.4
Q ss_pred CCCcCCCCEEEEee-CCCeeEEEEE
Q 044464 479 DLSLGIGTAVDAWW-SDGWWEGVVI 502 (686)
Q Consensus 479 ~~~~~vGD~VDAw~-~DGWWeGVV~ 502 (686)
.-.|+.||.|.+.. .++||.|...
T Consensus 41 eLs~~~Gd~i~v~~~~~~Ww~g~~~ 65 (86)
T 2oi3_A 41 DLSFQKGDQMVVLEESGEWWKARSL 65 (86)
T ss_dssp CCCCCTTCEEEEEEESSSEEEEEET
T ss_pred cCcCCCCCEEEEEEcCCCeEEEEEC
Confidence 45789999999965 3699999874
No 291
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=33.58 E-value=32 Score=27.23 Aligned_cols=20 Identities=15% Similarity=0.380 Sum_probs=0.0
Q ss_pred CcCCCCEEEEee-CCCeeEEE
Q 044464 481 SLGIGTAVDAWW-SDGWWEGV 500 (686)
Q Consensus 481 ~~~vGD~VDAw~-~DGWWeGV 500 (686)
.|+.||.|.+.. +++||.|.
T Consensus 25 sf~~Gd~i~v~~~~~~Ww~g~ 45 (70)
T 2vkn_A 25 SFEQNEILQVSDIEGRWWKAR 45 (70)
T ss_dssp CBCTTCEEEEECTTSSEEEEE
T ss_pred cCCCCCEEEEEEcCCCeEEEE
No 292
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=32.80 E-value=54 Score=25.87 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=0.0
Q ss_pred cCCCCCCCCCCCCcCCCCEEEEeeC-CCeeEEE
Q 044464 469 IRPTPPDNREDLSLGIGTAVDAWWS-DGWWEGV 500 (686)
Q Consensus 469 IRP~PP~~~~~~~~~vGD~VDAw~~-DGWWeGV 500 (686)
+-...+.....-.|+.||.|.+... ++||.|.
T Consensus 14 lydy~~~~~~eLs~~~Gd~i~v~~~~~~Ww~~~ 46 (68)
T 2k2m_A 14 NYDFQARNSSELSVKQRDVLEVLDDSRKWWKVR 46 (68)
T ss_dssp SSCBCCCSSSBCCBCTTCEEEEEECSSSEEEEE
T ss_pred CccCCCCCCCcccCCCCCEEEEEEcCCCeEEEE
No 293
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=31.93 E-value=16 Score=29.03 Aligned_cols=25 Identities=20% Similarity=0.561 Sum_probs=20.0
Q ss_pred CCCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 477 REDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 477 ~~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
.....|+.||.|.+.. +++||.|..
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (71)
T 1hsq_A 20 EDELTFIKSAIIQNVEKQEGGWWRGDY 46 (71)
T ss_dssp SSSCCCCTTCCCBSCCCBTTTEECCBC
T ss_pred CCccCCCCCCEEEEEEecCCCEEEEEE
Confidence 3456789999998876 689999975
No 294
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=31.76 E-value=24 Score=28.72 Aligned_cols=22 Identities=14% Similarity=0.510 Sum_probs=18.6
Q ss_pred CCCcCCCCEEEEee--CCCeeEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
...|+.||.|.+.. +++||.|.
T Consensus 7 eLs~~~Gd~i~v~~~~~~~Ww~g~ 30 (77)
T 2jmc_A 7 EVTMKKGDILTLLNSTNKDWWKVE 30 (77)
T ss_dssp CCCCCTTCEEECCCCCCSSCCCEE
T ss_pred ccCCCCCCEEEEEEecCCCEEEEE
Confidence 45789999999987 58999996
No 295
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.51 E-value=58 Score=28.26 Aligned_cols=42 Identities=12% Similarity=0.069 Sum_probs=33.4
Q ss_pred CCCcCCCCEEEEee-----CCCeeEEEEEEEecC-CCCeEEEEECCcc
Q 044464 479 DLSLGIGTAVDAWW-----SDGWWEGVVIGVDSS-STDNLQVYLSGES 520 (686)
Q Consensus 479 ~~~~~vGD~VDAw~-----~DGWWeGVV~kv~~~-g~~ky~VyFpGe~ 520 (686)
...|.+|+.|-|++ ++-|.++.|+++... +...|.|.|.|-+
T Consensus 7 ~~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~N 54 (87)
T 2eko_A 7 GGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFN 54 (87)
T ss_dssp SCSCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSC
T ss_pred cccccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCC
Confidence 35689999999998 779999999998632 3457888888743
No 296
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=30.94 E-value=51 Score=27.33 Aligned_cols=22 Identities=18% Similarity=0.322 Sum_probs=18.3
Q ss_pred CCCcCCCCEEEEee-CCCeeEEE
Q 044464 479 DLSLGIGTAVDAWW-SDGWWEGV 500 (686)
Q Consensus 479 ~~~~~vGD~VDAw~-~DGWWeGV 500 (686)
...|..||.|.+.. +++||.|.
T Consensus 47 eLs~~~Gd~i~v~~~~~~Ww~g~ 69 (86)
T 2jxb_A 47 ELDIKKNERLWLLDDSKTWWRVR 69 (86)
T ss_dssp BCCCCTTEEEEEEECCSSEEEEE
T ss_pred EeccCCCCEEEEEecCCCeEEEE
Confidence 45789999999976 46999997
No 297
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=30.92 E-value=28 Score=27.63 Aligned_cols=26 Identities=35% Similarity=0.777 Sum_probs=21.2
Q ss_pred CCCCcCCCCEEEEeeC-CCeeEEEEEE
Q 044464 478 EDLSLGIGTAVDAWWS-DGWWEGVVIG 503 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~-DGWWeGVV~k 503 (686)
..-.|..||.|.+... +|||.|...+
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~W~~g~~~~ 52 (74)
T 2m0y_A 26 DELSLQIGDTVHILETYEGWYRGYTLR 52 (74)
T ss_dssp SBCCEETTEEEEEEEBSSSCEEEEESS
T ss_pred CcccCCCCCEEEEEEcCCCeEEEEECC
Confidence 3467999999999775 6999998854
No 298
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=30.84 E-value=35 Score=27.57 Aligned_cols=23 Identities=17% Similarity=0.484 Sum_probs=19.2
Q ss_pred CCCcCCCCEEEEeeCC-------CeeEEEE
Q 044464 479 DLSLGIGTAVDAWWSD-------GWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D-------GWWeGVV 501 (686)
.-.|+.||.|.+.... +||.|..
T Consensus 31 eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~ 60 (80)
T 2v1r_A 31 EVALKKGDLMAILSKKDPLGRDSDWWKVRT 60 (80)
T ss_dssp BCCBCTTCEEEEEEEECTTSCEEEEEEEEC
T ss_pred EecCCCCCEEEEEECCCCCCCCCCcEEEEe
Confidence 5679999999998753 8999975
No 299
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}
Probab=30.30 E-value=48 Score=30.76 Aligned_cols=23 Identities=26% Similarity=0.641 Sum_probs=19.7
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
.-.|+.||.|.+.. +++||.|..
T Consensus 134 eLsf~~Gd~i~v~~~~~~~Ww~g~~ 158 (174)
T 3qwx_X 134 DLPFEQGERLEILSKTNQDWWEARN 158 (174)
T ss_dssp BCCBCTTCEEEEEECCSSSEEEEEC
T ss_pred ccccccCCEEEEEEccCCCeEEEEE
Confidence 46799999999987 479999985
No 300
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=29.85 E-value=58 Score=25.00 Aligned_cols=24 Identities=13% Similarity=0.390 Sum_probs=19.6
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|+..++ -|+.|+.
T Consensus 22 eLs~~~Gd~i~v~~~~~----~Ww~g~~ 45 (62)
T 2iim_A 22 DLGFEKGEQLRILEQSG----EWWKAQS 45 (62)
T ss_dssp BCCBCTTCEEEEEECCS----SEEEEEE
T ss_pred CcCCCCCCEEEEEEcCC----CEEEEEE
Confidence 57899999999998853 4888764
No 301
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=29.75 E-value=36 Score=28.37 Aligned_cols=23 Identities=17% Similarity=0.484 Sum_probs=19.2
Q ss_pred CCCcCCCCEEEEeeCC-------CeeEEEE
Q 044464 479 DLSLGIGTAVDAWWSD-------GWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D-------GWWeGVV 501 (686)
.-.|+.||.|.+.... |||.|..
T Consensus 31 eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~ 60 (92)
T 1jqq_A 31 EVALKKGDLMAILSKKDPLGRDSDWWKVRT 60 (92)
T ss_dssp BCCBCTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred CcCCCCCCEEEEEECCCCCCCCCCCeEEEe
Confidence 4678999999997752 9999986
No 302
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=29.38 E-value=51 Score=32.39 Aligned_cols=24 Identities=25% Similarity=0.763 Sum_probs=19.6
Q ss_pred CCCCcCCCCEEEEeeC--CCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWWS--DGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~--DGWWeGVV 501 (686)
..-.|..||.|.+... +|||.|..
T Consensus 17 ~el~~~~gd~i~v~~~~~~~w~~~~~ 42 (283)
T 3jv3_A 17 DELAFSKGQIINVLNKEDPDWWKGEV 42 (283)
T ss_dssp TBCCBCTTCEEEEEECCSTTEEEEEE
T ss_pred CcCCCCCCCEEEEEecCCCCEEEEEE
Confidence 3467999999999865 69999963
No 303
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=29.28 E-value=47 Score=26.61 Aligned_cols=27 Identities=11% Similarity=0.282 Sum_probs=0.0
Q ss_pred CCCCCCCCcCCCCEEEEeeC-CCeeEEE
Q 044464 474 PDNREDLSLGIGTAVDAWWS-DGWWEGV 500 (686)
Q Consensus 474 P~~~~~~~~~vGD~VDAw~~-DGWWeGV 500 (686)
+.....-.|+.||.|.+... ++||.|.
T Consensus 15 a~~~~ELsf~~Gd~i~vl~~~~~Ww~~~ 42 (67)
T 2b86_A 15 AQQDQELDIKKNERLWLLDDSKTWWRVR 42 (67)
T ss_dssp CSSTTSCCBCTTCEEEEEECSSSSCEEE
T ss_pred CCCCCccccCCCCEEEEEecCCCeEEEE
No 304
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=29.17 E-value=83 Score=28.58 Aligned_cols=39 Identities=13% Similarity=0.230 Sum_probs=31.8
Q ss_pred CCcCCCCEEEEeeCC-----CeeEEEEEEEecCC------CCeEEEEECC
Q 044464 480 LSLGIGTAVDAWWSD-----GWWEGVVIGVDSSS------TDNLQVYLSG 518 (686)
Q Consensus 480 ~~~~vGD~VDAw~~D-----GWWeGVV~kv~~~g------~~ky~VyFpG 518 (686)
..|.+|+.|=+|+.+ -|.++.|+++.... ...|.|.|.|
T Consensus 18 ~~F~~GEkVLc~hgd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~G 67 (110)
T 3m9p_A 18 FKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNG 67 (110)
T ss_dssp CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETT
T ss_pred CcccCCCEEEEEcCCCCCCCCceeeEEEEEEeccCcccccceEEEEEECC
Confidence 569999999999997 99999999986321 1368888877
No 305
>2pd0_A Hypothetical protein; structural genomics, structural genomics consortium, SGC, UN function; HET: MES; 2.30A {Cryptosporidium parvum}
Probab=28.91 E-value=11 Score=37.89 Aligned_cols=29 Identities=21% Similarity=0.224 Sum_probs=26.4
Q ss_pred EEEEeeccCCCccceeeccccccchhhHhhhcC
Q 044464 271 HLCTRQFRSNRLKPFDLSKLHGYHDQPILSLLN 303 (686)
Q Consensus 271 ~~C~rq~~n~~vKpFditql~GY~~QeIl~~l~ 303 (686)
-||+|||++. |--|.+.+|..++.++-++
T Consensus 26 ~Fa~RQfd~~----y~gt~I~~~~keeF~~kvn 54 (223)
T 2pd0_A 26 SFALRQFVEG----YRGSYIPRMSPYEFLRNVN 54 (223)
T ss_dssp GGGGGGGSTT----CSSCCCCSSCHHHHHHHHH
T ss_pred HHHHHhCCCC----CCceecCCCCHHHHHHHHH
Confidence 5899999987 9999999999999998885
No 306
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}
Probab=28.65 E-value=69 Score=28.49 Aligned_cols=25 Identities=16% Similarity=0.343 Sum_probs=20.4
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
..-.|+.||.|.+.. +++||.|...
T Consensus 18 ~ELsf~~Gd~i~vl~~~~~~Ww~g~~~ 44 (120)
T 2kym_A 18 DELDVSPGENLSICAHYDYEWFIAKPI 44 (120)
T ss_dssp TCCCBCTTCEEEEEEEETTTEEEEEES
T ss_pred CccCCCCCCEEEEEEecCCCEEEEEEC
Confidence 346799999999975 6899999863
No 307
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.63 E-value=68 Score=25.18 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=0.0
Q ss_pred cCCCCCCCCCCCCcCCCCEEEEeeCC-CeeEEE
Q 044464 469 IRPTPPDNREDLSLGIGTAVDAWWSD-GWWEGV 500 (686)
Q Consensus 469 IRP~PP~~~~~~~~~vGD~VDAw~~D-GWWeGV 500 (686)
+-+..+.......|+.||.|.+...+ +||.|.
T Consensus 13 lydy~~~~~~eLs~~~Gd~i~v~~~~~~Ww~~~ 45 (68)
T 1wxb_A 13 LYDFTARNANELSVLKDEVLEVLEDGRQWWKLR 45 (68)
T ss_dssp SSCBCCSSSSBCCBCTTCEEEEEECSSSEEEEE
T ss_pred CccCCCCCCCccCCCCCCEEEEEEcCCCEEEEE
No 308
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=28.55 E-value=57 Score=25.15 Aligned_cols=24 Identities=21% Similarity=0.531 Sum_probs=20.4
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|+... .-|+.|+.
T Consensus 23 eLs~~~Gd~i~v~~~~----~~Ww~g~~ 46 (65)
T 1w1f_A 23 DLSFKKGEKMKVLEEH----GEWWKAKS 46 (65)
T ss_dssp CCCBCTTCEEEEEEEC----SSEEEEEE
T ss_pred cCCCCCCCEEEEEEcC----CCEEEEEE
Confidence 5789999999999876 56988875
No 309
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=28.36 E-value=52 Score=31.27 Aligned_cols=23 Identities=22% Similarity=0.637 Sum_probs=19.3
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
.-.|+.||.|.+.. ++|||.|..
T Consensus 174 eL~~~~Gd~i~v~~~~~~~W~~g~~ 198 (217)
T 1gri_A 174 ELGFRRGDFIHVMDNSDPNWWKGAC 198 (217)
T ss_dssp BCCCCTTCEEEEEECCSSSEEEEEC
T ss_pred cCCCCCCCEEEEEEeCCCCeEEEEE
Confidence 45789999999976 469999986
No 310
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.64 E-value=59 Score=26.78 Aligned_cols=23 Identities=22% Similarity=0.225 Sum_probs=18.8
Q ss_pred CCCcCCCCEEEEeeC--CCeeEEEE
Q 044464 479 DLSLGIGTAVDAWWS--DGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~--DGWWeGVV 501 (686)
...|+.||.|.+... ++||.|..
T Consensus 35 eLs~~~Gd~i~v~~~~~~~Ww~~~~ 59 (85)
T 2yuq_A 35 ELALRRNEEYCLLDSSEIHWWRVQD 59 (85)
T ss_dssp BCCCCBTEEEEEEECCSSSEEEEEC
T ss_pred cCCCCCCCEEEEEEecCCCeEEEEE
Confidence 357899999999875 69999964
No 311
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=27.58 E-value=61 Score=24.36 Aligned_cols=24 Identities=8% Similarity=0.221 Sum_probs=19.5
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCI 419 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~At 419 (686)
.+.|++|+.|+|....+ ..|+.|+
T Consensus 17 eLs~~~Gd~i~v~~~~~---~~Ww~g~ 40 (57)
T 1cka_A 17 DLPFKKGDILRIRDKPE---EQWWNAE 40 (57)
T ss_dssp BCCBCTTCEEEEEECSS---SSEEEEE
T ss_pred CCCCCCCCEEEEEEecC---CCcEEEE
Confidence 57899999999998754 4588776
No 312
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=27.53 E-value=1.1e+02 Score=32.94 Aligned_cols=40 Identities=15% Similarity=0.319 Sum_probs=33.3
Q ss_pred cccCCCCCCEEEEEecCCcceeeEEEEEEEEee-CCeEEEEeCc
Q 044464 392 YSAMYKVNAKIELLCQDSGIRGCWFRCIVLQVS-QKQMKVRYDD 434 (686)
Q Consensus 392 ~~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk~~-~~ky~VeY~d 434 (686)
....|++|+.|=.+--+ .-|.|+|+|.... .+.|.|+|.+
T Consensus 454 ~~~~~~~~~~v~a~~p~---tt~fy~a~v~~~~~~~~~~~~f~~ 494 (522)
T 3mp6_A 454 PTKNYPPGTKVLARYPE---TTTFYPAIVIGTKRDGTCRLRFDG 494 (522)
T ss_dssp CCCCCCTTCEEEEECTT---CSEEEEEEEEEECTTSCEEEEETT
T ss_pred cccCCCCCCEEEEECCC---CcceEeEEEecCCCCCeEEEEecC
Confidence 35789999999988555 5799999999963 4679999988
No 313
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=27.42 E-value=75 Score=24.92 Aligned_cols=32 Identities=16% Similarity=0.320 Sum_probs=0.0
Q ss_pred cCCCCCCCCCCCCcCCCCEEEEeeCC-CeeEEE
Q 044464 469 IRPTPPDNREDLSLGIGTAVDAWWSD-GWWEGV 500 (686)
Q Consensus 469 IRP~PP~~~~~~~~~vGD~VDAw~~D-GWWeGV 500 (686)
+-+.-+.....-.|..||.|.+...+ +||.|.
T Consensus 13 lydy~~~~~~eLs~~~Gd~i~v~~~~~~Ww~~~ 45 (68)
T 1wxt_A 13 LYEFEARNPRELTVVQGEKLEVLDHSKRWWLVK 45 (68)
T ss_dssp SSCBCCCSSSBCCBCTTCEEEEEECSSSEEEEE
T ss_pred CceECCCCcCcCCCCCCCEEEEEEcCCCEEEEE
No 314
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=27.12 E-value=53 Score=31.23 Aligned_cols=24 Identities=25% Similarity=0.647 Sum_probs=20.3
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|..||.|.+.. ++|||.|..
T Consensus 26 ~eLs~~~Gd~i~vl~~~~~gWw~g~~ 51 (193)
T 1ng2_A 26 SEMALSTGDVVEVVEKSESGWWFCQM 51 (193)
T ss_dssp TCCCBCTTCEEEEEECCTTSCCEEEE
T ss_pred CcCCCCCCCEEEEEEecCCCeEEEEE
Confidence 456799999999987 479999994
No 315
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=26.83 E-value=74 Score=24.34 Aligned_cols=27 Identities=19% Similarity=0.272 Sum_probs=22.1
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQ 422 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk 422 (686)
.+.|++|+.|+|+...+ +.|+.|+...
T Consensus 17 eLs~~~Gd~i~v~~~~~---~~Ww~g~~~~ 43 (65)
T 2oaw_A 17 EVTMKKGDILTLLNSTN---KDWWKVEVKI 43 (65)
T ss_dssp BCCBCTTCEEEEEECCS---SSEEEEEEEE
T ss_pred CCCCCCCCEEEEEEcCC---CCEEEEEEcc
Confidence 57899999999998653 5699888763
No 316
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=26.65 E-value=62 Score=25.46 Aligned_cols=24 Identities=8% Similarity=0.221 Sum_probs=19.7
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCI 419 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~At 419 (686)
.+.|++|+.|+|+...+ +-|+.|+
T Consensus 19 eLsf~~Gd~i~v~~~~~---~~Ww~g~ 42 (65)
T 1b07_A 19 DLPFKKGDILRIRDKPE---EQWWNAE 42 (65)
T ss_dssp BCCBCTTCEEEEEECSS---SSEEEEE
T ss_pred ccCCcCCCEEEEEEecC---CCeEEEE
Confidence 57899999999998754 4688776
No 317
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.29 E-value=79 Score=25.72 Aligned_cols=24 Identities=17% Similarity=0.533 Sum_probs=19.4
Q ss_pred CCCcCCCCEEEEee-CCCeeEEEEE
Q 044464 479 DLSLGIGTAVDAWW-SDGWWEGVVI 502 (686)
Q Consensus 479 ~~~~~vGD~VDAw~-~DGWWeGVV~ 502 (686)
...|+.||.|.+.. +++||.|...
T Consensus 33 eLs~~~Gd~i~v~~~~~~Ww~~~~~ 57 (79)
T 2cud_A 33 PPIFRRGEKLRVISDEGGWWKAISL 57 (79)
T ss_dssp CCSSCTTCEEEEEEEETTEEEEEET
T ss_pred cCCCCCCCEEEEEecCCCeEEEEEC
Confidence 46789999999876 4699999754
No 318
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=26.09 E-value=50 Score=27.93 Aligned_cols=23 Identities=26% Similarity=0.765 Sum_probs=19.1
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGV 500 (686)
....|+.||.|.+.. +++||.|.
T Consensus 49 ~eLs~~~Gd~i~v~~~~~~~Ww~g~ 73 (98)
T 1udl_A 49 DELSFSKGQLINVMNKDDPDWWQGE 73 (98)
T ss_dssp TSCCCCTTCEEEECBCCSSSEEBCB
T ss_pred CccCCcCCCEEEEEEecCCCEEEEE
Confidence 356799999999977 46999997
No 319
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=25.85 E-value=73 Score=24.49 Aligned_cols=26 Identities=15% Similarity=0.525 Sum_probs=19.7
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCI 419 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~At 419 (686)
.+.|++|+.|+|+..+.+ ...|+.|+
T Consensus 22 eLs~~~Gd~i~v~~~~~~-~~~W~~g~ 47 (64)
T 2jte_A 22 ELTFREGEIIHLISKETG-EAGWWKGE 47 (64)
T ss_dssp BCCBCTTCEEEEEESCSS-STTEEEEE
T ss_pred ccCCCCCCEEEEEECCCC-CCCEEEEE
Confidence 688999999999986422 23488886
No 320
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.81 E-value=63 Score=25.69 Aligned_cols=27 Identities=11% Similarity=0.142 Sum_probs=21.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCI 419 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~At 419 (686)
.+.|++|+.|+|+..+.....-|+.|+
T Consensus 24 eLsf~~Gd~i~v~~~~~~~~~~Ww~g~ 50 (73)
T 2dl7_A 24 ELSFPEGAIIRILNKENQDDDGFWEGE 50 (73)
T ss_dssp BCCBCTTCEEEEEECCCSSSSSCEEEE
T ss_pred cCCCCCCCEEEEEECCCCCCCCcEEEE
Confidence 588999999999987433345688886
No 321
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=25.33 E-value=72 Score=25.47 Aligned_cols=23 Identities=17% Similarity=0.253 Sum_probs=19.2
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCI 419 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~At 419 (686)
.+.|++|+.|+|+..++ -|+.++
T Consensus 26 eLs~~~Gd~i~v~~~~~----~Ww~g~ 48 (74)
T 1j3t_A 26 HLNFSKHDIITVLEQQE----NWWFGE 48 (74)
T ss_dssp BCCBCTTCEEEEEEECS----SEEEEE
T ss_pred ccCCCCCCEEEEEecCC----CEEEEE
Confidence 58899999999998864 388876
No 322
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=25.13 E-value=77 Score=23.92 Aligned_cols=26 Identities=15% Similarity=0.086 Sum_probs=20.5
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVL 421 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVI 421 (686)
.+.|++|+.|+|....+ +.|+.++..
T Consensus 16 eLs~~~Gd~i~v~~~~~---~~Ww~g~~~ 41 (58)
T 1jo8_A 16 ELTFVENDKIINIEFVD---DDWWLGELE 41 (58)
T ss_dssp BCCBCTTCEEEEEECCS---SSEEEEEET
T ss_pred CcccCCCCEEEEEEecC---CCcEEEEEC
Confidence 58899999999998644 458888754
No 323
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=24.88 E-value=64 Score=34.40 Aligned_cols=24 Identities=25% Similarity=0.656 Sum_probs=20.2
Q ss_pred CCCCcCCCCEEEEee--CCCeeEEEE
Q 044464 478 EDLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
..-.|..||.|.+.. ++|||.|.+
T Consensus 45 ~eL~~~~gd~i~v~~~~~~~Ww~g~~ 70 (466)
T 2pz1_A 45 QELGFKAGDVIEVMDATNREWWWGRV 70 (466)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CcCCCCCCCEEEEEEecCCCEEEEEE
Confidence 346799999999987 589999985
No 324
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=24.84 E-value=72 Score=24.09 Aligned_cols=25 Identities=16% Similarity=0.371 Sum_probs=20.2
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+ +-|+.++.
T Consensus 17 eLs~~~Gd~i~v~~~~~---~~Ww~g~~ 41 (58)
T 2bz8_A 17 ELTISVGEIITNIRKED---GGWWEGQI 41 (58)
T ss_dssp BCCBCTTCEEEEEECCT---TTEEEEEE
T ss_pred EeeECCCCEEEEEEeCC---CCEEEEEE
Confidence 58899999999998754 45888874
No 325
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=24.67 E-value=71 Score=24.01 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=20.6
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|+...++ .-|+.|+.
T Consensus 17 eLs~~~Gd~i~v~~~~~~--~~W~~g~~ 42 (58)
T 1zuu_A 17 EITITPGDKISLVARDTG--SGWTKINN 42 (58)
T ss_dssp BCCBCTTCCEEEEECCSS--SSEEEEEE
T ss_pred cccCCCCCEEEEeEcCCC--CCCEEEEE
Confidence 688999999999987652 24888875
No 326
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=24.21 E-value=78 Score=23.98 Aligned_cols=25 Identities=12% Similarity=0.292 Sum_probs=19.8
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+ .-|+.++.
T Consensus 20 eLs~~~Gd~i~v~~~~~---~~Ww~g~~ 44 (59)
T 2g6f_X 20 ELSFSKGDVIHVTRVEE---GGWWEGTH 44 (59)
T ss_dssp BCCBCTTCEEEEEEECT---TSEEEEEE
T ss_pred CcCCCCCCEEEEEEecC---CCEEEEEE
Confidence 58899999999998654 35888863
No 327
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=24.17 E-value=89 Score=24.92 Aligned_cols=26 Identities=19% Similarity=0.299 Sum_probs=19.5
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCI 419 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~At 419 (686)
.+.|++|+.|+|+..+. ...-|+.++
T Consensus 18 eLs~~~Gd~i~vl~~~~-~~~gWw~g~ 43 (69)
T 2ydl_A 18 ELTIKEGDIVTLINKDC-IDVGWWEGE 43 (69)
T ss_dssp BCCBCTTCEEEEEESCC-SSTTEEEEE
T ss_pred ccccCCCCEEEEEEcCC-CCCCEEEEE
Confidence 68899999999998731 123488886
No 328
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=24.05 E-value=89 Score=23.81 Aligned_cols=25 Identities=20% Similarity=0.371 Sum_probs=19.9
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|+...+ .-|+.|+.
T Consensus 19 eLs~~~Gd~i~v~~~~~---~~W~~g~~ 43 (61)
T 1y0m_A 19 ELTFTKSAIIQNVEKQD---GGWWRGDY 43 (61)
T ss_dssp BCCBCTTCEEEEEECCS---SSEEEEEE
T ss_pred CcCCcCCCEEEEEEecC---CCEEEEEE
Confidence 68899999999998754 35888764
No 329
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=23.99 E-value=77 Score=25.56 Aligned_cols=26 Identities=12% Similarity=0.221 Sum_probs=21.1
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVL 421 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVI 421 (686)
.+.|++|+.|+|+...+ .-|+.++..
T Consensus 23 eLs~~~Gd~i~v~~~~~---~gWw~g~~~ 48 (80)
T 1ue9_A 23 QLSLAPGQLILILKKNT---SGWWQGELQ 48 (80)
T ss_dssp BCCCCTTCEEEEEEECS---SSEEEEEEC
T ss_pred CCCCCCCCEEEEEEecC---CCcEEEEEC
Confidence 58899999999998754 459888755
No 330
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=23.67 E-value=84 Score=24.10 Aligned_cols=25 Identities=16% Similarity=0.302 Sum_probs=19.9
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+ +.|+.|+.
T Consensus 21 eLs~~~Gd~i~v~~~~~---~~Ww~g~~ 45 (62)
T 1uj0_A 21 ELTFKHGELITVLDDSD---ANWWQGEN 45 (62)
T ss_dssp BCCBCTTCEEEEEECCS---SSEEEEEE
T ss_pred CcCCCCCCEEEEEEeCC---CCEEEEEE
Confidence 58899999999998643 56888864
No 331
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=23.67 E-value=2.2e+02 Score=23.85 Aligned_cols=52 Identities=15% Similarity=0.154 Sum_probs=40.7
Q ss_pred CCCcCCCCEEEEeeCC-CeeEEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 479 DLSLGIGTAVDAWWSD-GWWEGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 479 ~~~~~vGD~VDAw~~D-GWWeGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
...|++||.|=+-... .==+|.|+++. ++.+.|+=.-+..++.+-..+||.+
T Consensus 15 rK~F~~GDHVkVi~G~~~getGlVV~v~---~d~v~v~SD~t~~Ei~V~~~dL~~~ 67 (69)
T 2do3_A 15 RKYFKMGDHVKVIAGRFEGDTGLIVRVE---ENFVILFSDLTMHELKVLPRDLQLC 67 (69)
T ss_dssp CSSCCTTCEEEESSSTTTTCEEEEEEEC---SSCEEEEESSSCSEEEECTTSEEES
T ss_pred eeeccCCCeEEEeccEEcCceEEEEEEe---CCEEEEEeCCCCCEEEEEhHHhhhh
Confidence 4679999999997531 11379999984 6677777778899999999999865
No 332
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=23.51 E-value=72 Score=24.99 Aligned_cols=27 Identities=19% Similarity=0.390 Sum_probs=20.7
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCI 419 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~At 419 (686)
.+.|++|+.|+|+.........|+.|+
T Consensus 19 eLs~~~Gd~i~v~~~~~~~~~~Ww~g~ 45 (69)
T 1wyx_A 19 ELSFRKGDIMTVLEQDTQGLDGWWLCS 45 (69)
T ss_dssp BCCBCTTCEEEEEETTGGGCTTEEEEE
T ss_pred ccCCcCCCEEEEeECCCCCCCCcEEEE
Confidence 588999999999987532234588887
No 333
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=23.35 E-value=89 Score=23.72 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=19.9
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|+.... .+-|+.++.
T Consensus 21 eLs~~~Gd~i~v~~~~~--~~~W~~~~~ 46 (63)
T 3eg3_A 21 TLSITKGEKLRVLGYNH--NGEWCEAQT 46 (63)
T ss_dssp BCCBCTTCEEEEEEECT--TSSEEEEEE
T ss_pred ccCCCCCCEEEEEEeCC--CCCeEEEEE
Confidence 58999999999998432 145888875
No 334
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=23.24 E-value=75 Score=24.33 Aligned_cols=25 Identities=12% Similarity=0.267 Sum_probs=19.4
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|+...+ .-|+.++.
T Consensus 19 eLs~~~Gd~i~v~~~~~---~~W~~g~~ 43 (62)
T 2fpe_A 19 ELELEVDDPLLVELQAE---DYWYEAYN 43 (62)
T ss_dssp BCCBCTTCEEEEEEECT---TSEEEEEE
T ss_pred cCcCCCCCEEEEEEecC---CCEEEEEE
Confidence 58899999999986543 45887763
No 335
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=23.22 E-value=89 Score=23.49 Aligned_cols=25 Identities=12% Similarity=0.340 Sum_probs=20.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+ .-|+.++.
T Consensus 17 eLs~~~Gd~i~v~~~~~---~~Ww~g~~ 41 (58)
T 1uti_A 17 ELGFRSGEVVEVLDSSN---PSWWTGRL 41 (58)
T ss_dssp BCCBCTTCEEEEEECCS---SSEEEEEE
T ss_pred CCCCCCCCEEEEEEECC---CCEEEEEE
Confidence 58899999999998643 45888774
No 336
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=22.65 E-value=1.2e+02 Score=22.50 Aligned_cols=26 Identities=15% Similarity=0.194 Sum_probs=20.4
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....++ .-|+.++.
T Consensus 16 eLs~~~Gd~i~v~~~~~~--~~W~~g~~ 41 (54)
T 2a28_A 16 EISIDPGDIITVIRGDDG--SGWTYGEC 41 (54)
T ss_dssp BCCBCTTCEEEEEECCCS--SSEEEEEE
T ss_pred CccCCCCCEEEEEEecCC--CCEEEEEE
Confidence 588999999999987642 24888875
No 337
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=22.48 E-value=56 Score=25.84 Aligned_cols=26 Identities=19% Similarity=0.520 Sum_probs=21.2
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVLQ 422 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVIk 422 (686)
.+.|++|+.|+|...++| |+.|+.++
T Consensus 27 eLs~~~Gd~i~v~~~~~~----W~~g~~~~ 52 (74)
T 2m0y_A 27 ELSLQIGDTVHILETYEG----WYRGYTLR 52 (74)
T ss_dssp BCCEETTEEEEEEEBSSS----CEEEEESS
T ss_pred cccCCCCCEEEEEEcCCC----eEEEEECC
Confidence 589999999999987543 99987653
No 338
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=22.41 E-value=90 Score=23.35 Aligned_cols=26 Identities=15% Similarity=0.146 Sum_probs=20.4
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVL 421 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVI 421 (686)
.+.|++|+.|+|....+ .-|+.|+..
T Consensus 17 eLs~~~Gd~i~v~~~~~---~gW~~g~~~ 42 (58)
T 1zuy_A 17 ELPLKKGDVIYITREEP---SGWSLGKLL 42 (58)
T ss_dssp BCCBCTTCEEEEEEECT---TSEEEEEES
T ss_pred cCCCCCCCEEEEEEecC---CCeEEEEEC
Confidence 57899999999998753 348887654
No 339
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=22.24 E-value=1.1e+02 Score=23.16 Aligned_cols=27 Identities=15% Similarity=0.341 Sum_probs=20.1
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+. ..-|+.|+.
T Consensus 19 eLs~~~Gd~i~v~~~~~~-~~~Ww~g~~ 45 (60)
T 1oot_A 19 DLPFRKGDVITILKKSDS-QNDWWTGRV 45 (60)
T ss_dssp BCCBCTTCEEEEEECCSC-TTSEEEEEE
T ss_pred EeeEcCCCEEEEEEeCCC-CCCeEEEEE
Confidence 588999999999986421 235888774
No 340
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=22.24 E-value=89 Score=24.04 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=20.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|+...+ +-|..|++
T Consensus 37 eLsf~~Gd~i~v~~~~~---~~Ww~g~~ 61 (62)
T 1g2b_A 37 EVTMKKGDILTLLNSTN---KDWWKVEV 61 (62)
T ss_dssp BCCBCTTCEEEEEECCS---SSEEEEEE
T ss_pred ccCCCCCCEEEEEEecC---CCEEEEEe
Confidence 68899999999998753 46887764
No 341
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=22.21 E-value=96 Score=23.23 Aligned_cols=25 Identities=8% Similarity=0.267 Sum_probs=20.1
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+ .-|+.|+.
T Consensus 18 eLs~~~Gd~i~v~~~~~---~~Ww~g~~ 42 (58)
T 2vwf_A 18 ELGFRRGDFIHVMDNSD---PNWWKGAC 42 (58)
T ss_dssp BCCBCTTCEEEEEECCS---SSEEEEEE
T ss_pred CcCCCCCCEEEEEEcCC---CCEEEEEE
Confidence 58899999999998643 45888875
No 342
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=21.99 E-value=99 Score=23.17 Aligned_cols=25 Identities=20% Similarity=0.419 Sum_probs=20.1
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+ .-|+.|+.
T Consensus 18 eLs~~~Gd~i~v~~~~~---~~Ww~g~~ 42 (58)
T 1sem_A 18 ELAFKRGDVITLINKDD---PNWWEGQL 42 (58)
T ss_dssp BCCBCTTCEEEEEECSS---SSEEEEEE
T ss_pred CcCCCCCCEEEEEEecC---CCEEEEEE
Confidence 57899999999998743 45888875
No 343
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=21.94 E-value=59 Score=27.25 Aligned_cols=23 Identities=22% Similarity=0.472 Sum_probs=18.9
Q ss_pred CCCCcCCCCEEEEeeC------CCeeEEE
Q 044464 478 EDLSLGIGTAVDAWWS------DGWWEGV 500 (686)
Q Consensus 478 ~~~~~~vGD~VDAw~~------DGWWeGV 500 (686)
....|+.||.|.+... ++||.|.
T Consensus 32 ~eLsf~~Gd~i~v~~~~~~~~~~gWw~g~ 60 (93)
T 1wxu_A 32 EEISFRAGDMLNLALKEQQPKVRGWLLAS 60 (93)
T ss_dssp SBCCBCSSCBCEECCTTTSCSCSSCEEEE
T ss_pred CccCcCCCCEEEEEECCCCCCCCCcEEEE
Confidence 3567999999999875 3999995
No 344
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=21.58 E-value=98 Score=23.33 Aligned_cols=25 Identities=24% Similarity=0.316 Sum_probs=20.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+ .-|+.++.
T Consensus 18 eLs~~~Gd~i~v~~~~~---~~Ww~g~~ 42 (58)
T 1zx6_A 18 DLGLKPGDKVQLLEKLS---PEWYKGSC 42 (58)
T ss_dssp BCCBCTTCEEEEEEECS---SSEEEEEE
T ss_pred CccCCCCCEEEEEEecC---CCEEEEEE
Confidence 58899999999997643 45888874
No 345
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=21.17 E-value=1.2e+02 Score=22.84 Aligned_cols=26 Identities=19% Similarity=0.379 Sum_probs=19.3
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|.... ....|+.++.
T Consensus 18 eLs~~~Gd~i~v~~~~--~~~~Ww~g~~ 43 (60)
T 2v1q_A 18 ELTIKSGDKVYILDDK--KSKDWWMCQL 43 (60)
T ss_dssp BCCBCTTCEEEEEESS--SCSSEEEEEE
T ss_pred CccCCCCCEEEEEeCC--CCCCCEEEEE
Confidence 5789999999999862 1234887764
No 346
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=21.06 E-value=62 Score=36.15 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=20.8
Q ss_pred CCCCCcCCCCEEEEee--CCCeeEEEEE
Q 044464 477 REDLSLGIGTAVDAWW--SDGWWEGVVI 502 (686)
Q Consensus 477 ~~~~~~~vGD~VDAw~--~DGWWeGVV~ 502 (686)
...-.|+.||.|.+.- ++|||.|+..
T Consensus 456 ~dELs~~~GD~i~v~~~~~~gW~~G~~~ 483 (526)
T 2de0_X 456 ADEIPMEPGDIIGVAGNHWDGYSKGVNR 483 (526)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEEET
T ss_pred CCcCCcCCCCEEEEccccCCCeeEEEeC
Confidence 3456899999999965 5899999753
No 347
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=21.05 E-value=89 Score=25.46 Aligned_cols=25 Identities=16% Similarity=0.470 Sum_probs=20.8
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVL 421 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVI 421 (686)
.+.|++|+.|+|+... +-|+.|+.+
T Consensus 41 eLs~~~Gd~i~v~~~~----~~Ww~g~~~ 65 (86)
T 2oi3_A 41 DLSFQKGDQMVVLEES----GEWWKARSL 65 (86)
T ss_dssp CCCCCTTCEEEEEEES----SSEEEEEET
T ss_pred cCcCCCCCEEEEEEcC----CCeEEEEEC
Confidence 5789999999999887 369888763
No 348
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=20.94 E-value=88 Score=32.40 Aligned_cols=23 Identities=26% Similarity=0.528 Sum_probs=19.3
Q ss_pred CCCcCCCCEEEEee--CCCeeEEEE
Q 044464 479 DLSLGIGTAVDAWW--SDGWWEGVV 501 (686)
Q Consensus 479 ~~~~~vGD~VDAw~--~DGWWeGVV 501 (686)
.-.|+.||.|.+.. ++|||.|..
T Consensus 190 eLsf~~Gd~i~v~~~~~~~Ww~g~~ 214 (341)
T 2dyb_A 190 ELNFKAGDVIFLLSRINKDWLEGTV 214 (341)
T ss_dssp BCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred cCCccCCCEEEEEEecCCCEEEEEE
Confidence 45689999999976 689999983
No 349
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=20.93 E-value=97 Score=24.63 Aligned_cols=25 Identities=16% Similarity=0.308 Sum_probs=20.2
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|+...+ +.|+.|+.
T Consensus 29 eLs~~~Gd~i~v~~~~~---~~W~~g~~ 53 (73)
T 3c0c_A 29 ELGFREGDLITLTNQID---ENWYEGML 53 (73)
T ss_dssp BCCBCTTCEEEEEEECS---SSEEEEEE
T ss_pred CccCcCCCEEEEEEecC---CCEEEEEE
Confidence 68899999999998653 45888864
No 350
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=20.91 E-value=97 Score=25.31 Aligned_cols=26 Identities=19% Similarity=0.473 Sum_probs=21.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVL 421 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVI 421 (686)
.+.|++|+.|+|+...+ +.|+.|+.+
T Consensus 21 eLs~~~Gd~i~vl~~~~---~~Ww~g~~~ 46 (79)
T 3cqt_A 21 DLSFHKGEKFQILNSSE---GDWWEARSL 46 (79)
T ss_dssp BCCBCTTCEEEEEECTT---SSEEEEEET
T ss_pred cCCCCCCCEEEEEEecC---CCeEEEEEC
Confidence 58899999999998654 469888753
No 351
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=20.84 E-value=1e+02 Score=23.94 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=19.6
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCI 419 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~At 419 (686)
.+.|++|+.|+|+...+ .-|+.++
T Consensus 23 eLs~~~Gd~i~v~~~~~---~~Ww~g~ 46 (68)
T 2djq_A 23 DLKFNKGDVILLRRQLD---ENWYQGE 46 (68)
T ss_dssp CCCCCTTCEEEEEECCC---SSEEEEE
T ss_pred CccCCCCCEEEEEEecC---CCEEEEE
Confidence 58899999999998643 4588887
No 352
>1b8k_A NT3, protein (neurotrophin-3); complex (growth factor/growth factor), hormone/growth factor complex; 2.15A {Homo sapiens} SCOP: g.17.1.3 PDB: 1nt3_A 3buk_A* 1bnd_B
Probab=20.64 E-value=51 Score=30.41 Aligned_cols=31 Identities=26% Similarity=0.550 Sum_probs=23.9
Q ss_pred cc-cccccccccccCCeEEEEeeEEEEEecCCceeEe
Q 044464 154 CG-KQLKHFPAFCRNGTTISIQSFVFVMAKGENHYVA 189 (686)
Q Consensus 154 C~-Kr~kHY~sF~RnG~tIsVh~FVyv~aee~~~~vA 189 (686)
|+ =-.||+-|.|. ..|+||+.|..+.+..++
T Consensus 67 CrGID~rhwnS~C~-----tt~SyVrALt~~~~~~~~ 98 (119)
T 1b8k_A 67 CRGIDDKHWNSQCK-----TSQTYVRALTSENNKLVG 98 (119)
T ss_dssp CTTCCCSSCCCEEE-----EEEEEEEEEEESSSSCCE
T ss_pred ccCEecccccCeee-----CcEEEEEEEEEcCCCeee
Confidence 76 33569999997 489999999998875433
No 353
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.63 E-value=87 Score=25.49 Aligned_cols=25 Identities=20% Similarity=0.756 Sum_probs=19.8
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVL 421 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVI 421 (686)
.+.|++|+.|+|+..+ +-|+.|+.+
T Consensus 33 eLs~~~Gd~i~v~~~~----~~Ww~~~~~ 57 (79)
T 2cud_A 33 PPIFRRGEKLRVISDE----GGWWKAISL 57 (79)
T ss_dssp CCSSCTTCEEEEEEEE----TTEEEEEET
T ss_pred cCCCCCCCEEEEEecC----CCeEEEEEC
Confidence 5889999999999853 458888643
No 354
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.58 E-value=94 Score=25.40 Aligned_cols=25 Identities=12% Similarity=0.371 Sum_probs=20.1
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCI 419 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~At 419 (686)
.+.|++|+.|+|+...++ .-|+.|+
T Consensus 33 eLsf~~Gd~i~v~~~~~~--~~Ww~g~ 57 (81)
T 1x6g_A 33 ELAFRKGDVVTILEACEN--KSWYRVK 57 (81)
T ss_dssp CCCBCTTCEEEEEECCCS--SSEEEEE
T ss_pred CCCCCCCCEEEEEeccCC--CCeEEEE
Confidence 578999999999986543 3598886
No 355
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=20.43 E-value=1e+02 Score=23.47 Aligned_cols=25 Identities=24% Similarity=0.315 Sum_probs=20.0
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+ +-|+.++.
T Consensus 20 eLs~~~Gd~i~v~~~~~---~~W~~g~~ 44 (60)
T 1w70_A 20 ELNFKAGDVIFLLSRIN---KDWLEGTV 44 (60)
T ss_dssp BCCBCTTCEEEEEEECS---SSEEEEEE
T ss_pred CccCCCCCEEEEEEeCC---CCeEEEEE
Confidence 58899999999998753 45888873
No 356
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=20.41 E-value=1.2e+02 Score=23.98 Aligned_cols=26 Identities=19% Similarity=0.272 Sum_probs=19.7
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCI 419 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~At 419 (686)
.+.|++|+.|+|+..+ ....-|+.|+
T Consensus 25 eLs~~~Gd~i~v~~~~-~~~~~W~~g~ 50 (73)
T 2k9g_A 25 ELTIKEGDIVTLINKD-CIDVGWWEGE 50 (73)
T ss_dssp BCCBCTTCEEEEEECC-SSSTTEEEEE
T ss_pred eeeECCCCEEEEEECC-CCCCCEEEEE
Confidence 5889999999999863 1123488887
No 357
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=20.35 E-value=90 Score=24.61 Aligned_cols=25 Identities=12% Similarity=0.267 Sum_probs=19.5
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+ .-|+.++.
T Consensus 22 eLs~~~Gd~i~v~~~~~---~gW~~g~~ 46 (71)
T 2fpf_A 22 ELELEVDDPLLVELQAE---DYWYEAYN 46 (71)
T ss_dssp BCCBCTTCEEEEEEECT---TSEEEEEE
T ss_pred cccCcCCcEEEEeEecC---CCEEEEEE
Confidence 58899999999986544 45887763
No 358
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=20.28 E-value=1e+02 Score=24.72 Aligned_cols=25 Identities=8% Similarity=0.198 Sum_probs=19.9
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|....+ .-|+.+++
T Consensus 22 ELs~~~Gd~i~v~~~~~---~gWw~g~~ 46 (65)
T 2lj0_A 22 ELELRDGDIVDVMEKCD---DGWFVGTS 46 (65)
T ss_dssp BCCBCTTCEEEEEEECT---TSEEEEEE
T ss_pred CcCCCCCCEEEEeEeCC---CCEEEEEE
Confidence 68999999999997654 24888865
No 359
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=20.21 E-value=1.5e+02 Score=27.88 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=24.3
Q ss_pred CCcCCCCEEEEeeCCCeeEEEEEEEec
Q 044464 480 LSLGIGTAVDAWWSDGWWEGVVIGVDS 506 (686)
Q Consensus 480 ~~~~vGD~VDAw~~DGWWeGVV~kv~~ 506 (686)
..|.+|+.|=||+..-|+++.|+++..
T Consensus 8 ~~f~~gekvl~~hg~llYeAKVl~v~~ 34 (136)
T 2k3y_A 8 QEFALGGRVLAFHGPLMYEAKILKIWD 34 (136)
T ss_dssp GSCCTTSEEEEECSSCEEEEEEEEEEE
T ss_pred cccCCCCEEEEEECCeeEEEEEEEEEe
Confidence 358999999999999999999999863
No 360
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=20.14 E-value=1.1e+02 Score=24.20 Aligned_cols=25 Identities=20% Similarity=0.332 Sum_probs=20.2
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIV 420 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtV 420 (686)
.+.|++|+.|+|+...+ +.|+.|+.
T Consensus 19 eLsf~~Gd~i~v~~~~~---~~Ww~g~~ 43 (68)
T 2ew3_A 19 ELGFKEGDIITLTNQID---ENWYEGMI 43 (68)
T ss_dssp BCCBCTTCEEEEEEESS---SSEEEEEE
T ss_pred ccCCCCCCEEEEEEecC---CCEEEEEE
Confidence 58899999999998653 35888874
No 361
>1vq8_Q 50S ribosomal protein L21E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_Q* 1vq5_Q* 1vq6_Q* 1vq7_Q* 1s72_Q* 1vq9_Q* 1vqk_Q* 1vql_Q* 1vqm_Q* 1vqn_Q* 1vqo_Q* 1vqp_Q* 1yhq_Q* 1yi2_Q* 1yij_Q* 1yit_Q* 1yj9_Q* 1yjn_Q* 1yjw_Q* 2otj_Q* ...
Probab=20.11 E-value=1.6e+02 Score=26.09 Aligned_cols=53 Identities=17% Similarity=0.122 Sum_probs=39.8
Q ss_pred CCcCCCCEEEEeeCCCee-----------EEEEEEEecCCCCeEEEEECCcceEEEeecCCCcce
Q 044464 480 LSLGIGTAVDAWWSDGWW-----------EGVVIGVDSSSTDNLQVYLSGESLFLNVNKNDLRIS 533 (686)
Q Consensus 480 ~~~~vGD~VDAw~~DGWW-----------eGVV~kv~~~g~~ky~VyFpGe~del~f~~sdLRps 533 (686)
..|++||.||.--++.-. +|+|..+. ...--+.|.....+..+.+....||++
T Consensus 32 ~~yk~Gd~VdIk~~~svqKGmPhk~yHGkTG~V~~v~-~~AvgV~Vnk~vk~Kri~vr~eHik~s 95 (96)
T 1vq8_Q 32 EEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQ-GDAYKVDIVDGGKEKTIIVTAAHLRRQ 95 (96)
T ss_dssp CCCCTTCEEEECCCTTCCSSCCCGGGTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECGGGEEEC
T ss_pred HHcCCCCEEEEEecCCccCCCCcccCCCCCeEEEeEC-CCEEEEEEeecCCCcEEEeCHhHcccC
Confidence 579999999998877664 89999985 122245555566677888888888876
No 362
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=20.06 E-value=1.1e+02 Score=24.10 Aligned_cols=26 Identities=19% Similarity=0.473 Sum_probs=20.8
Q ss_pred ccCCCCCCEEEEEecCCcceeeEEEEEEE
Q 044464 393 SAMYKVNAKIELLCQDSGIRGCWFRCIVL 421 (686)
Q Consensus 393 ~~~FkvG~~VEV~S~EeGfrGsWF~AtVI 421 (686)
.+.|++|+.|+|....+ ..|+.++.+
T Consensus 31 eLs~~~Gd~i~v~~~~~---~~Ww~g~~~ 56 (73)
T 3h0h_A 31 DLSFHKGEKFQILNSSE---GDWWEARSL 56 (73)
T ss_dssp BCCBCTTCEEEEEECSS---SSEEEEEET
T ss_pred cceEeCCCEEEEEEecC---CCeEEEEEC
Confidence 68899999999998654 359888764
Done!