Query 044471
Match_columns 493
No_of_seqs 283 out of 1708
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 05:40:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044471.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044471hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x0b_A Renin; hydrolase-hormon 100.0 3.1E-60 1.1E-64 483.6 24.3 308 71-435 51-383 (383)
2 3vla_A EDGP; extracellular, in 100.0 4.3E-59 1.5E-63 480.1 30.0 338 70-436 8-400 (413)
3 3psg_A Pepsinogen; hydrolase(a 100.0 1.6E-59 5.4E-64 477.3 26.3 306 71-435 46-370 (370)
4 3fv3_A SAPP1P-secreted asparti 100.0 1E-58 3.5E-63 467.1 31.6 307 71-444 3-338 (339)
5 1tzs_A Cathepsin E; hydrolase, 100.0 1.1E-58 3.7E-63 468.8 30.4 310 82-443 20-350 (351)
6 1j71_A Candidapepsin, aspartic 100.0 2.6E-58 8.9E-63 463.0 28.4 314 71-445 3-334 (334)
7 1mpp_A Pepsin; hydrolase(acid 100.0 5.4E-58 1.9E-62 465.6 30.1 317 70-440 7-360 (361)
8 2qzx_A Candidapepsin-5; aspart 100.0 6.1E-58 2.1E-62 461.8 29.3 317 71-445 3-341 (342)
9 3pvk_A Candidapepsin-2; hydrol 100.0 1.6E-57 5.4E-62 459.0 28.7 310 84-445 11-341 (342)
10 3cms_A Chymosin B; hydrolase, 100.0 7.9E-58 2.7E-62 457.4 25.3 298 82-435 11-323 (323)
11 1am5_A Pepsin, acid proteinase 100.0 2.5E-57 8.7E-62 454.0 27.8 297 82-435 9-324 (324)
12 2apr_A Rhizopuspepsin; hydrola 100.0 8E-57 2.7E-61 450.3 31.2 299 82-435 12-324 (325)
13 3k1w_A Renin; protease, altern 100.0 8.8E-58 3E-62 460.7 24.3 309 70-435 7-340 (341)
14 1dpj_A Proteinase A; proteinas 100.0 5E-57 1.7E-61 452.8 29.6 298 82-435 10-329 (329)
15 4aa9_A Chymosin; hydrolase, as 100.0 2.2E-57 7.7E-62 453.7 24.5 298 82-435 8-320 (320)
16 3aup_A SBG7S, BG, basic 7S glo 100.0 1.4E-56 4.9E-61 461.4 30.2 340 70-438 9-396 (403)
17 1miq_A Plasmepsin; aspartic pr 100.0 5.7E-57 2E-61 459.3 26.4 296 82-435 59-374 (375)
18 1htr_B Gastricsin; aspartyl pr 100.0 1.3E-56 4.5E-61 449.7 27.1 300 82-435 9-329 (329)
19 3c9x_A Trichoderma reesei aspa 100.0 1.8E-56 6.1E-61 448.6 26.2 302 82-434 12-329 (329)
20 1oew_A Endothiapepsin; hydrola 100.0 1.7E-56 5.8E-61 448.7 25.7 300 83-434 13-329 (329)
21 3qvc_A Histo-aspartic protease 100.0 1.9E-56 6.5E-61 463.7 26.0 296 82-435 134-449 (451)
22 1qdm_A Prophytepsin; aspartic 100.0 2.7E-56 9.1E-61 466.6 26.6 311 71-434 42-477 (478)
23 1yg9_A Aspartic protease BLA G 100.0 6.5E-56 2.2E-60 444.5 25.8 295 82-435 14-329 (330)
24 2bju_A Plasmepsin II; aspartic 100.0 3.5E-56 1.2E-60 461.1 23.0 304 72-435 129-450 (453)
25 3lpj_A Beta-secretase 1; alzhe 100.0 2.7E-55 9.3E-60 458.7 29.9 318 84-445 73-432 (455)
26 2ewy_A Beta-secretase 2; BACE2 100.0 2E-54 6.8E-59 442.9 30.8 318 84-445 12-367 (383)
27 1t6e_X Xylanase inhibitor; two 100.0 1.6E-54 5.4E-59 442.9 28.1 318 82-436 11-374 (381)
28 2qp8_A Beta-secretase 1; BACE1 100.0 3.3E-54 1.1E-58 443.0 30.4 317 84-445 20-379 (395)
29 3vf3_A Beta-secretase 1; struc 100.0 3.5E-54 1.2E-58 443.8 29.4 318 84-445 27-386 (402)
30 1ibq_A Aspergillopepsin; aspar 100.0 5.2E-54 1.8E-58 429.9 28.2 296 83-435 12-325 (325)
31 1wkr_A Polyporopepsin; hydrola 100.0 6.2E-54 2.1E-58 432.3 27.1 290 84-438 11-336 (340)
32 1izd_A Aspartic proteinase; su 100.0 1.1E-53 3.7E-58 427.2 25.2 292 83-434 13-322 (323)
33 1bxo_A Protein (penicillopepsi 100.0 8.8E-54 3E-58 427.9 23.1 292 83-434 13-322 (323)
34 1b5f_A Protein (cardosin A); h 100.0 5.9E-43 2E-47 334.3 17.8 217 82-345 10-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 9.7E-38 3.3E-42 298.9 21.8 218 206-435 5-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 3.9E-23 1.3E-27 167.7 8.1 83 82-195 10-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 8.4E-17 2.9E-21 127.9 8.0 81 353-435 2-87 (87)
38 2i1a_A DNA damage-inducible pr 94.0 0.19 6.5E-06 42.8 8.4 99 298-432 31-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 92.5 0.19 6.6E-06 43.0 5.9 107 289-433 23-134 (148)
40 2hs1_A HIV-1 protease; ultra-h 80.8 2 7E-05 33.7 4.7 27 88-116 10-36 (99)
41 1fmb_A EIAV protease; hydrolas 79.5 1.8 6.3E-05 34.3 4.1 26 88-115 10-35 (104)
42 3ec0_A Protease; HIV-2, inhibi 75.8 3.4 0.00011 32.4 4.5 27 88-116 10-36 (99)
43 2i1a_A DNA damage-inducible pr 73.9 2.5 8.7E-05 35.6 3.8 30 84-115 24-53 (148)
44 3liy_A Protease; hydrolase, hy 71.3 3.4 0.00012 33.1 3.6 30 89-118 13-45 (116)
45 2hah_A Protease, retropepsin; 66.4 5.3 0.00018 32.3 3.8 25 88-115 16-40 (116)
46 3s8i_A Protein DDI1 homolog 1; 63.7 5.7 0.00019 33.6 3.7 30 85-116 23-52 (148)
47 3sqf_A Protease; folded monome 58.6 9.6 0.00033 30.6 4.0 28 88-117 11-38 (114)
48 3slz_A GAG-Pro-POL polyprotein 48.2 21 0.00071 29.5 4.5 28 87-116 23-50 (132)
49 2rsp_A RSV protease; hydrolase 43.1 24 0.00084 28.7 4.1 23 93-117 27-49 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 40.9 23 0.00078 31.5 3.9 26 88-115 10-35 (203)
51 1lya_A Cathepsin D; lysosomal 39.5 28 0.00094 26.8 3.8 16 319-334 29-44 (97)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 22.2 94 0.0032 27.5 4.6 26 88-115 114-139 (203)
53 1bxo_A Protein (penicillopepsi 21.7 86 0.0029 29.6 4.7 39 279-334 6-44 (323)
54 1ibq_A Aspergillopepsin; aspar 21.5 94 0.0032 29.4 4.9 40 279-335 5-44 (325)
55 1wkr_A Polyporopepsin; hydrola 21.2 71 0.0024 30.4 4.0 15 319-333 28-42 (340)
56 3fv3_A SAPP1P-secreted asparti 20.8 71 0.0024 30.4 3.9 36 282-333 5-42 (339)
57 1izd_A Aspartic proteinase; su 20.6 95 0.0032 29.3 4.7 40 279-335 6-45 (323)
58 2k1k_A Ephrin type-A receptor 20.6 44 0.0015 21.0 1.5 8 464-471 7-14 (38)
59 1j71_A Candidapepsin, aspartic 20.3 74 0.0025 30.3 3.9 15 319-333 28-42 (334)
No 1
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.1e-60 Score=483.56 Aligned_cols=308 Identities=26% Similarity=0.460 Sum_probs=259.3
Q ss_pred eeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC----CCCCCCCCcccCCcCCCCCCCccceec
Q 044471 71 VDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN----GCPGTSGLQIQLNFFDPSSSSTASLVR 146 (493)
Q Consensus 71 ~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~----~C~~~~~~~~~~~~y~p~~SsT~~~v~ 146 (493)
...|+.+ +.+.+|+++|+||||||+|+|++||||+++||+|..|. .|..+ +.|||++|+||+.
T Consensus 51 ~~~~l~n----~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~-------~~y~~~~SsT~~~-- 117 (383)
T 2x0b_A 51 SSVILTN----YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH-------KLFDASDSSSYKH-- 117 (383)
T ss_dssp CEEEEEE----ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTS-------CCBCGGGCTTCEE--
T ss_pred ceEeeee----cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCC-------CCCCCCCCCcEEE--
Confidence 3456654 45689999999999999999999999999999999996 58776 8999999999983
Q ss_pred cCCccccCCCCCCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCC
Q 044471 147 CSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDR 226 (493)
Q Consensus 147 C~~~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~ 226 (493)
++|.|.++|++|+ ++|++++|+|++++.. +. +.|||++.+.+.. +...
T Consensus 118 ---------------------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~g~~-f~~~ 165 (383)
T 2x0b_A 118 ---------------------NGTELTLRYSTGT-VSGFLSQDIITVGGIT--------VT-QMFGEVTEMPALP-FMLA 165 (383)
T ss_dssp ---------------------EEEEEEEECSSCE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECCHHH-HTTC
T ss_pred ---------------------CCcEEEEEcCCcc-EEEEEEeeEEEEcCce--------EE-EEEEEEEecCCcc-cccC
Confidence 4589999999998 6999999999998643 55 8999999876532 1245
Q ss_pred CcceEEeeCCCCCc------HHHHHHhCCCCC-cceEEeecCCCCC----cceEEeCCCCC----CCeEEecCCCCCCee
Q 044471 227 AVDGIFGFGQQSMS------VISQLSSQGLTP-RVFSHCLKGDSNG----GGILVLGEIVE----PNIVYSPLVPSQPHY 291 (493)
Q Consensus 227 ~~~GIlGLg~~~~s------~~~qL~~~g~i~-~~FS~~l~~~~~~----~G~l~fGg~d~----~~~~~~pl~~~~~~y 291 (493)
.+|||||||++..+ ++++|++||+|+ ++||+||++.... +|.|+|||+|+ +++.|+|+. ...+|
T Consensus 166 ~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w 244 (383)
T 2x0b_A 166 EFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVW 244 (383)
T ss_dssp SSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSC
T ss_pred CCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceE
Confidence 67999999998654 789999999996 8999999886433 79999999994 689999998 57899
Q ss_pred eEEEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEe
Q 044471 292 NLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNF 371 (493)
Q Consensus 292 ~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f 371 (493)
+|.|++|.|+++.+. ...+..+|+||||+++++|++++++|.+++++.. ....+.++|+....+|+|+|+|
T Consensus 245 ~v~l~~i~v~~~~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~--~~g~~~v~C~~~~~~P~i~f~~ 315 (383)
T 2x0b_A 245 QIQMKGVSVGSSTLL-------CEDGCLALVDTGASYISGSTSSIEKLMEALGAKK--RLFDYVVKCNEGPTLPDISFHL 315 (383)
T ss_dssp EEEECEEEESSCCCB-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE--CSSCEEEEGGGTTTCCCEEEEE
T ss_pred EEEEeEEEeCCceEE-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc--cCCcEEEeccccccCceEEEEE
Confidence 999999999987642 2345689999999999999999999999998766 3344667888777899999999
Q ss_pred cCCcEEEecCcccEEEecccCCeeEEEEEEEecC------CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 372 AGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQ------GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 372 ~gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~------~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
+|.+++|+|++|+++... .+...|.++|+..+ +.||||++|||++|+|||++++|||||+++
T Consensus 316 -~g~~~~l~~~~yi~~~~~-~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 316 -GGKEYTLTSADYVFQESY-SSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp -TTEEEEECHHHHBCCCCC-CTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -CCEEEEECHHHhEeeccC-CCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 889999999999987532 12334555787642 689999999999999999999999999863
No 2
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=4.3e-59 Score=480.06 Aligned_cols=338 Identities=22% Similarity=0.375 Sum_probs=272.8
Q ss_pred ceeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCC
Q 044471 70 VVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSD 149 (493)
Q Consensus 70 ~~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~ 149 (493)
.+.+|+.+. ..+++|+++|+||||||+|.|++||||+++||+|.+| .+|+|++.++|.+
T Consensus 8 ~~~~pv~~d---~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s 66 (413)
T 3vla_A 8 ALVVPVKKD---ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRT 66 (413)
T ss_dssp EEEEEEEEC---TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTS
T ss_pred cEEEEeeec---CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCc
Confidence 566777654 3578999999999999999999999999999999865 2589999999999
Q ss_pred ccccCCCCCCCC--------CCCCCCCCceeEEEc-CCCCeEEEEEEEEEEEeeeccCCccc-cccCcceEEEeEeeccC
Q 044471 150 QRCSLGLNTADS--------GCSSESNQCSYTFQY-GDGSGTSGYYVADFLHLDTILQGSLT-TNSTAQIMFGCSTMQTG 219 (493)
Q Consensus 150 ~~C~~~~~~~~~--------~c~~~~~~~~~~~~Y-g~Gs~~~G~~~~D~v~~~~~~~~~~~-~~~~~~~~FG~~~~~~~ 219 (493)
+.|.....+... .|. ++.|.|.+.| +||+.+.|++++|+|+|+...+.... ...+.++.|||++.+..
T Consensus 67 ~~C~~~~~~~~~~c~s~~~~~c~--~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~ 144 (413)
T 3vla_A 67 SQCSLSGSIACGDCFNGPRPGCN--NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLL 144 (413)
T ss_dssp HHHHHTTCCEEECCSSCCBTTBC--SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGG
T ss_pred ccccccccCCCcccccCCCCCCC--CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccc
Confidence 999876544322 343 4679999999 58888899999999999864433210 12357899999998632
Q ss_pred CCCCCCCCcceEEeeCCCCCcHHHHHHhCCCCCcceEEeecCCCCCcceEEeCCCCC---------CC-eEEecCCCCC-
Q 044471 220 DLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVE---------PN-IVYSPLVPSQ- 288 (493)
Q Consensus 220 ~~~~~~~~~~GIlGLg~~~~s~~~qL~~~g~i~~~FS~~l~~~~~~~G~l~fGg~d~---------~~-~~~~pl~~~~- 288 (493)
.. ....+|||||||++.+|++.||.+++.++++||+||.+....+|.|+||++|. ++ ++|+||+.++
T Consensus 145 ~g--~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~ 222 (413)
T 3vla_A 145 QN--LASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPV 222 (413)
T ss_dssp TT--SCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSS
T ss_pred cC--cccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCc
Confidence 11 13568999999999999999999999888899999998656789999999873 35 9999998552
Q ss_pred ------------CeeeEEEeEEEEcCEEeecCCCccccc--CCCcEEEeccCcceeccHHHHHHHHHHHHhhccc-----
Q 044471 289 ------------PHYNLNLQSISVNGQTLSIDPSAFSTS--SNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQ----- 349 (493)
Q Consensus 289 ------------~~y~v~l~~i~v~~~~~~~~~~~~~~~--~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~----- 349 (493)
.+|+|+|++|+|+++.+.++++.+... .+.++||||||++++||+++|++|.++|.+++..
T Consensus 223 ~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~ 302 (413)
T 3vla_A 223 STSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITR 302 (413)
T ss_dssp CCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCc
Confidence 699999999999999998887666543 2468999999999999999999999999987641
Q ss_pred -CccccccCCCCc---------CccceEEEEecC-CcEEEecCcccEEEecccCCeeEEEEEEEecC----Cceeechhh
Q 044471 350 -SVRPVLTKGNHT---------AIFPQISFNFAG-GASLILNAQEYLIQQNSVGGTAVWCIGIQKIQ----GQTILGDLV 414 (493)
Q Consensus 350 -~~~~~~~~~~~~---------~~~P~i~f~f~g-g~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~----~~~ILG~~f 414 (493)
........|... ..+|+|+|+|.| +++++|++++|+++.. .+.+|++|...+ +.||||+.|
T Consensus 303 ~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~----~~~~Cl~~~~~~~~~~~~~IlGd~f 378 (413)
T 3vla_A 303 VASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN----DNVVCLGVVDGGSNLRTSIVIGGHQ 378 (413)
T ss_dssp ECCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE----TTEEEECEEEEESSCSSSEEECHHH
T ss_pred CCCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC----CCcEEEEEEecCCCcccceeEehhh
Confidence 111122345432 378999999965 4899999999999753 246789998764 579999999
Q ss_pred hcceEEEEECCCCEEEEEeCCC
Q 044471 415 LKDKIFVYDLAGQRIGWSNYDC 436 (493)
Q Consensus 415 l~~~yvvfD~~~~~igfA~~~c 436 (493)
||++|+|||++++|||||++.+
T Consensus 379 l~~~~vvfD~~~~riGfa~~~~ 400 (413)
T 3vla_A 379 LEDNLVQFDLATSRVGFSGTLL 400 (413)
T ss_dssp HTTEEEEEETTTTEEEEEEEGG
T ss_pred hcCeEEEEECCCCEEEEEEecc
Confidence 9999999999999999998643
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.6e-59 Score=477.32 Aligned_cols=306 Identities=27% Similarity=0.489 Sum_probs=258.1
Q ss_pred eeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC--CCCCCCCCcccCCcCCCCCCCccceeccC
Q 044471 71 VDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN--GCPGTSGLQIQLNFFDPSSSSTASLVRCS 148 (493)
Q Consensus 71 ~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~v~C~ 148 (493)
...|+++ +.+.+|+++|+||||||+|+|++||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 46 ~~~~l~n----~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~-------~~y~~~~SsT~~~---- 110 (370)
T 3psg_A 46 GDEPLEN----YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDH-------NQFNPDDSSTFEA---- 110 (370)
T ss_dssp CCCTTGG----GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS-------CCBCGGGCTTCEE----
T ss_pred ceeccee----ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCC-------CCCCCccCcCcEE----
Confidence 4455544 56789999999999999999999999999999999997 47665 8999999999984
Q ss_pred CccccCCCCCCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCc
Q 044471 149 DQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAV 228 (493)
Q Consensus 149 ~~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~ 228 (493)
.+|.|.+.|++|+ +.|.+++|+|++++.. +.++.|||++.+.+.. +....+
T Consensus 111 -------------------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~-~~~~~~ 161 (370)
T 3psg_A 111 -------------------TSQELSITYGTGS-MTGILGYDTVQVGGIS--------DTNQIFGLSETEPGSF-LYYAPF 161 (370)
T ss_dssp -------------------EEEEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGG-GGGCSC
T ss_pred -------------------CCcEEEEEeCCce-EEEEEEEEEEeeCCcc--------cCCeEEEEEEeecccc-cccCCc
Confidence 4578999999999 6999999999998654 5789999999886632 234567
Q ss_pred ceEEeeCCCCC------cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCC----CCCeEEecCCCCCCeeeEEEeE
Q 044471 229 DGIFGFGQQSM------SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIV----EPNIVYSPLVPSQPHYNLNLQS 297 (493)
Q Consensus 229 ~GIlGLg~~~~------s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d----~~~~~~~pl~~~~~~y~v~l~~ 297 (493)
|||||||++.. +++++|++||+|+ ++||+||.+....+|.|+|||+| ++++.|+|+. .+.+|.|.+++
T Consensus 162 dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~ 240 (370)
T 3psg_A 162 DGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDS 240 (370)
T ss_dssp SEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECE
T ss_pred cceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeE
Confidence 99999999765 4789999999996 89999999875568999999999 4799999998 56899999999
Q ss_pred EEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEE
Q 044471 298 ISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASL 377 (493)
Q Consensus 298 i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~ 377 (493)
|.|+++.+.. ..+..+||||||+++++|++++++|.+++++... ....|.++|+....+|+|+|+| ||.++
T Consensus 241 i~v~g~~~~~-------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~-~~g~~~v~C~~~~~lP~i~f~~-~g~~~ 311 (370)
T 3psg_A 241 ITMDGETIAC-------SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-SDGEMVISCSSIDSLPDIVFTI-DGVQY 311 (370)
T ss_dssp EESSSSEEEC-------TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-TTCCEECCGGGGGGCCCEEEEE-TTEEE
T ss_pred EEECCEEEec-------CCCceEEEcCCCCcEECCHHHHHHHHHHhCCccc-CCCcEEEECCCcccCCcEEEEE-CCEEE
Confidence 9999987642 2456899999999999999999999999987653 3345778898777899999999 89999
Q ss_pred EecCcccEEEecccCCeeEEEEEEEecC------CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 378 ILNAQEYLIQQNSVGGTAVWCIGIQKIQ------GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 378 ~l~p~~y~~~~~~~~~~~~~cl~i~~~~------~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
+|++++|+++ . .+.|.++|+..+ +.||||++|||++|+|||++++|||||+++
T Consensus 312 ~l~~~~yi~~-~----~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 312 PLSPSAYILQ-D----DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp EECHHHHEEE-C----SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EECHHHhccc-C----CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 9999999998 2 235666787642 369999999999999999999999999974
No 4
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1e-58 Score=467.12 Aligned_cols=307 Identities=27% Similarity=0.432 Sum_probs=266.0
Q ss_pred eeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEe-----CCCCCCCCCCCCCcccCCcCCCCCCCcccee
Q 044471 71 VDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVS-----CSSCNGCPGTSGLQIQLNFFDPSSSSTASLV 145 (493)
Q Consensus 71 ~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~-----~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v 145 (493)
+++|+.+. ++.|+++|+||||||+++|++||||+++||+ |..|..|..+ +.|||++|+|++..
T Consensus 3 i~~~l~~~-----~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~ 70 (339)
T 3fv3_A 3 ISLSLINE-----GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSS-------GTFTPSSSSSYKNL 70 (339)
T ss_dssp EEEEEEEC-----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTT-------CCBCGGGCTTCEEE
T ss_pred eeeEEEcC-----CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCC-------CcCCCccCcceeeC
Confidence 45666543 4689999999999999999999999999998 6666678776 89999999999844
Q ss_pred ccCCccccCCCCCCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCC
Q 044471 146 RCSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSD 225 (493)
Q Consensus 146 ~C~~~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~ 225 (493)
.|.|.+.|++|+.+.|.+++|+|+|++.. +.++.|||++..++
T Consensus 71 -----------------------~~~~~i~Yg~gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~------ 113 (339)
T 3fv3_A 71 -----------------------GAAFTIRYGDGSTSQGTWGKDTVTINGVS--------ITGQQIADVTQTSV------ 113 (339)
T ss_dssp -----------------------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEESS------
T ss_pred -----------------------CceEEEEECCCceEEEEEEEEEEEECCEE--------ECceEEEEEEecCC------
Confidence 47899999999889999999999998654 57899999998754
Q ss_pred CCcceEEeeCCCCCc----------------HHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCCC----CCeEEecC
Q 044471 226 RAVDGIFGFGQQSMS----------------VISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPL 284 (493)
Q Consensus 226 ~~~~GIlGLg~~~~s----------------~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl 284 (493)
.+||||||++..+ |+++|++||+|+ ++||+||++.....|.|+|||+|+ +++.|+|+
T Consensus 114 --~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~ 191 (339)
T 3fv3_A 114 --DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQV 191 (339)
T ss_dssp --SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEB
T ss_pred --CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEec
Confidence 4899999987542 899999999997 799999998766789999999984 68999999
Q ss_pred CCCCCeeeEEEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhccc---CccccccCCCCc
Q 044471 285 VPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQ---SVRPVLTKGNHT 361 (493)
Q Consensus 285 ~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~---~~~~~~~~~~~~ 361 (493)
. ...+|.|++++|.|+++.+.. ...++|||||++++||++++++|.+++++.+.. ....+.++|..
T Consensus 192 ~-~~~~~~v~l~~i~v~g~~~~~---------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~- 260 (339)
T 3fv3_A 192 T-SSQALTISLASVNLKGSSFSF---------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDCNT- 260 (339)
T ss_dssp C-CSSSCEEEEEEEEESSCEEEE---------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEECTTC-
T ss_pred c-cCccEEEEEEEEEECCEeecC---------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEEecCC-
Confidence 8 456999999999999988753 256999999999999999999999999987753 34556778874
Q ss_pred CccceEEEEecCCcEEEecCcccEEEecccCCeeEEEEEEEecCCceeechhhhcceEEEEECCCCEEEEEeCCCCCCcc
Q 044471 362 AIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVN 441 (493)
Q Consensus 362 ~~~P~i~f~f~gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~~~~ 441 (493)
..+|+|+|+|.+|.+++|++++|+++.. .+.|+++|++ .+.||||++|||++|+|||++++|||||+++|+.+++
T Consensus 261 ~~~p~i~f~f~~g~~~~v~~~~~~~~~~----~~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~ 335 (339)
T 3fv3_A 261 DTSGTTVFNFGNGAKITVPNTEYVYQNG----DGTCLWGIQP-SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDSS 335 (339)
T ss_dssp CCCSEEEEEETTSCEEEEEGGGGEEECS----SSCEEESEEE-CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCC
T ss_pred CCCCcEEEEECCCCEEEECHHHheeeCC----CCeEEEEEEe-CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCccc
Confidence 5689999999668999999999999742 3568899988 5789999999999999999999999999999999888
Q ss_pred eee
Q 044471 442 VST 444 (493)
Q Consensus 442 i~~ 444 (493)
|.+
T Consensus 336 i~~ 338 (339)
T 3fv3_A 336 ISA 338 (339)
T ss_dssp EEE
T ss_pred eEE
Confidence 875
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-58 Score=468.77 Aligned_cols=310 Identities=28% Similarity=0.464 Sum_probs=255.9
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC--CCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN--GCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTA 159 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~ 159 (493)
+.+++|+++|+||||+|++.|++||||+++||+|..|. .|..+ +.|||++|+|++
T Consensus 20 ~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~---------------- 76 (351)
T 1tzs_A 20 YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTH-------SRFQPSQSSTYS---------------- 76 (351)
T ss_dssp GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS-------CCBCGGGCTTCB----------------
T ss_pred cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCC-------CcCCcccCcceE----------------
Confidence 45689999999999999999999999999999999997 68776 899999999997
Q ss_pred CCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC
Q 044471 160 DSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM 239 (493)
Q Consensus 160 ~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 239 (493)
..+|.|.+.|++|+ +.|.+++|+|++++.. +.++.|||++.+.+.. +.....+||||||++..
T Consensus 77 -------~~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~ 139 (351)
T 1tzs_A 77 -------QPGQSFSIQYGTGS-LSGIIGADQVSVEGLT--------VVGQQFGESVTEPGQT-FVDAEFDGILGLGYPSL 139 (351)
T ss_dssp -------CCSCEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGG-GGGCSCSEEEECSCGGG
T ss_pred -------ECCCEEEEEeCCCC-eEEEEEEeEEEECCeE--------ECCeEEEEEEeccccc-cccCCCceEEecCCccc
Confidence 46689999999998 6999999999998643 5679999999876532 12356799999999865
Q ss_pred c------HHHHHHhCCCCC-cceEEeecCCCCC--cceEEeCCCC----CCCeEEecCCCCCCeeeEEEeEEEEcCEEee
Q 044471 240 S------VISQLSSQGLTP-RVFSHCLKGDSNG--GGILVLGEIV----EPNIVYSPLVPSQPHYNLNLQSISVNGQTLS 306 (493)
Q Consensus 240 s------~~~qL~~~g~i~-~~FS~~l~~~~~~--~G~l~fGg~d----~~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~ 306 (493)
+ ++++|++||+|+ ++||+||++.... +|.|+||++| ++++.|+|+. ...+|.|.|++|.|+++.+.
T Consensus 140 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~ 218 (351)
T 1tzs_A 140 AVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIALDNIQVGGTVMF 218 (351)
T ss_dssp SGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEEEEEEETTEEEE
T ss_pred cccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEeCEEEECCceEE
Confidence 4 889999999996 8999999886443 7999999999 3789999998 46799999999999998753
Q ss_pred cCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEE
Q 044471 307 IDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLI 386 (493)
Q Consensus 307 ~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~ 386 (493)
......+||||||++++||++++++|.+++++.... ..+.++|.....+|+|+|+| +|.+++|++++|++
T Consensus 219 -------~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~--g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~yi~ 288 (351)
T 1tzs_A 219 -------CSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVD--GEYAVECANLNVMPDVTFTI-NGVPYTLSPTAYTL 288 (351)
T ss_dssp -------CTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECS--SSEEECGGGGGGSCCEEEEE-TTEEEEECTTTSEE
T ss_pred -------cCCCceEEeccCCcceeCCHHHHHHHHHHhCCcccC--CeEEEeCCCCccCCcEEEEE-CCEEEEECHHHhEe
Confidence 124567999999999999999999999999876654 55777887767899999999 88999999999998
Q ss_pred EecccCCeeEEEEEEEec------CCceeechhhhcceEEEEECCCCEEEEEeCCCCCCccee
Q 044471 387 QQNSVGGTAVWCIGIQKI------QGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVS 443 (493)
Q Consensus 387 ~~~~~~~~~~~cl~i~~~------~~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~~~~i~ 443 (493)
+... .+...|.++|+.. .+.||||++|||++|+|||++++|||||+++|....+||
T Consensus 289 ~~~~-~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~~~~~ 350 (351)
T 1tzs_A 289 LDFV-DGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSHPQFE 350 (351)
T ss_dssp CC------CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--------
T ss_pred eccC-CCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccchhhc
Confidence 7532 1223455578864 268999999999999999999999999999998777665
No 6
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.6e-58 Score=462.98 Aligned_cols=314 Identities=25% Similarity=0.403 Sum_probs=260.9
Q ss_pred eeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCC--CCCCCCC--CCCCcccCCcCCCCCCCccceec
Q 044471 71 VDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCS--SCNGCPG--TSGLQIQLNFFDPSSSSTASLVR 146 (493)
Q Consensus 71 ~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~--~C~~C~~--~~~~~~~~~~y~p~~SsT~~~v~ 146 (493)
+++|+.+. +.+|+++|+||||+|+++|++||||+++||+|. .|..|.. ....|...+.|||++|+|++.
T Consensus 3 ~~~~l~~~-----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~-- 75 (334)
T 1j71_A 3 VPTTLINE-----GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQN-- 75 (334)
T ss_dssp EEEEEEEC-----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEE--
T ss_pred eeEEEecC-----CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCccc--
Confidence 45566542 478999999999999999999999999999876 6764321 011222348999999999984
Q ss_pred cCCccccCCCCCCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCC
Q 044471 147 CSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDR 226 (493)
Q Consensus 147 C~~~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~ 226 (493)
.+|.|.+.|++|+.++|.+++|+|++++.. +.++.|||++...
T Consensus 76 ---------------------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~-------- 118 (334)
T 1j71_A 76 ---------------------LNQDFSIEYGDLTSSQGSFYKDTVGFGGIS--------IKNQQFADVTTTS-------- 118 (334)
T ss_dssp ---------------------EEEEEEEEBTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES--------
T ss_pred ---------------------CCCceEEEECCCCEEEEEEEEEEEEECCEE--------EccEEEEEEEecC--------
Confidence 357899999999988999999999998643 5789999998763
Q ss_pred CcceEEeeCCCCC--------cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCCC----CCeEEecCCCCCCeeeE
Q 044471 227 AVDGIFGFGQQSM--------SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPLVPSQPHYNL 293 (493)
Q Consensus 227 ~~~GIlGLg~~~~--------s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v 293 (493)
..+||||||++.. +++.+|++||+|+ ++||+||++.....|.|+||++|+ +++.|+|+. ...+|.|
T Consensus 119 ~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v 197 (334)
T 1j71_A 119 VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRV 197 (334)
T ss_dssp SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECC-CSSSCEE
T ss_pred CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEcc-CCCeEEE
Confidence 3589999999754 7999999999996 799999987656789999999985 579999998 4569999
Q ss_pred EEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccc-cCCCCcCccceEEEEec
Q 044471 294 NLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVL-TKGNHTAIFPQISFNFA 372 (493)
Q Consensus 294 ~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~-~~~~~~~~~P~i~f~f~ 372 (493)
.+++|.|+++.+.. ...+||||||++++||++++++|.+++.+.++.....|. .+|+ .+|+|+|+|.
T Consensus 198 ~l~~i~v~g~~~~~---------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~C~---~~p~i~f~f~ 265 (334)
T 1j71_A 198 HLGSINFDGTSVST---------NADVVLDSGTTITYFSQSTADKFARIVGATWDSRNEIYRLPSCD---LSGDAVFNFD 265 (334)
T ss_dssp EEEEEEETTEEEEE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEETTTTEEECSSSC---CCSEEEEEES
T ss_pred EEeEEEECCEeccC---------CccEEEeCCCCcEecCHHHHHHHHHHcCCcccCCCceEEEEcCC---CCCceEEEEc
Confidence 99999999988753 246999999999999999999999999988754444565 7784 3899999997
Q ss_pred CCcEEEecCcccEEEecccCCeeEEEEEEEecCCceeechhhhcceEEEEECCCCEEEEEeCCCCCCcceeec
Q 044471 373 GGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVSTT 445 (493)
Q Consensus 373 gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~~~~i~~~ 445 (493)
||.+++|++++|+++... ...|.++++.. +.||||++|||++|+|||++++|||||+++|+.++||+++
T Consensus 266 ~g~~~~i~~~~y~~~~~~---~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~i 334 (334)
T 1j71_A 266 QGVKITVPLSELILKDSD---SSICYFGISRN-DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSDISAL 334 (334)
T ss_dssp TTCEEEEEGGGGEEECSS---SSCEEESEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCCEEEC
T ss_pred CCcEEEECHHHheeecCC---CCeeEEEEeEC-CCcEEChHhhccEEEEEECCCCEEEEEecCCCCccceEEC
Confidence 789999999999998531 12355667765 6799999999999999999999999999999998888763
No 7
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=5.4e-58 Score=465.61 Aligned_cols=317 Identities=24% Similarity=0.394 Sum_probs=266.4
Q ss_pred ceeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC---CCCCCCCCcccCCcCCCCCCCccceec
Q 044471 70 VVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN---GCPGTSGLQIQLNFFDPSSSSTASLVR 146 (493)
Q Consensus 70 ~~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~---~C~~~~~~~~~~~~y~p~~SsT~~~v~ 146 (493)
....|+.+ +.+++|+++|+||||+|+++|+|||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 7 ~~~~~l~~----~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~-- 73 (361)
T 1mpp_A 7 VDTPGLYD----FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK-------RFFDPSSSSTFKE-- 73 (361)
T ss_dssp EEEEEEEE----TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS-------CCBCGGGCTTCEE--
T ss_pred cceEEeec----CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC-------CcCCCccCCceEe--
Confidence 44566654 44689999999999999999999999999999999998 79876 8999999999984
Q ss_pred cCCccccCCCCCCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccC-----CC
Q 044471 147 CSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTG-----DL 221 (493)
Q Consensus 147 C~~~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~-----~~ 221 (493)
.+|.|.+.|++|+ +.|.+++|+|+|++.. +.++.|||++.+++ ..
T Consensus 74 ---------------------~~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~~~~~ 123 (361)
T 1mpp_A 74 ---------------------TDYNLNITYGTGG-ANGIYFRDSITVGGAT--------VKQQTLAYVDNVSGPTAEQSP 123 (361)
T ss_dssp ---------------------EEEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEESGGGSSCT
T ss_pred ---------------------cCCeEEEEECCce-EEEEEEEEEEEECCEE--------EeceEEEEEEeccCccccccc
Confidence 3478999999999 6999999999998643 57899999998876 22
Q ss_pred CCCCCCcceEEeeCCCCC------------cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCC----CCCeEEecC
Q 044471 222 TKSDRAVDGIFGFGQQSM------------SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIV----EPNIVYSPL 284 (493)
Q Consensus 222 ~~~~~~~~GIlGLg~~~~------------s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d----~~~~~~~pl 284 (493)
+.....+||||||++.. +++++|++||+|+ ++||+||.+. ...|.|+||++| ++++.|+|+
T Consensus 124 -~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~ 201 (361)
T 1mpp_A 124 -DSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDV 201 (361)
T ss_dssp -TCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEEC
T ss_pred -cccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEc
Confidence 22456799999998743 4778999999996 8999999875 558999999998 378999999
Q ss_pred CCCCC---eeeEEEeEEEEcCEEeecCCCcccccCCCcEE-EeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCC
Q 044471 285 VPSQP---HYNLNLQSISVNGQTLSIDPSAFSTSSNKGTI-VDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNH 360 (493)
Q Consensus 285 ~~~~~---~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~i-iDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~ 360 (493)
..... +|.|.|++|.|+++.+.. .....+| |||||++++||++++++|.+++.+.+......+..+|..
T Consensus 202 ~~~~~~~~~~~v~l~~i~v~~~~~~~-------~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~ 274 (361)
T 1mpp_A 202 LKSRGGYFFWDAPVTGVKIDGSDAVS-------FDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATESQQGYTVPCSK 274 (361)
T ss_dssp EEETTEEEEEEEEEEEEEETTEEEEE-------EEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEEETTEEEEEHHH
T ss_pred ccCCCceeEEEEEEeEEEECCeeecc-------CCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcccCCCCcEEEECCC
Confidence 85444 999999999999987642 1245799 999999999999999999999988665444556678876
Q ss_pred cCcc-ceEEEEec-C-----CcEEEecCcccEEEecccCCeeEEEEEEEecC-CceeechhhhcceEEEEECCCCEEEEE
Q 044471 361 TAIF-PQISFNFA-G-----GASLILNAQEYLIQQNSVGGTAVWCIGIQKIQ-GQTILGDLVLKDKIFVYDLAGQRIGWS 432 (493)
Q Consensus 361 ~~~~-P~i~f~f~-g-----g~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~-~~~ILG~~fl~~~yvvfD~~~~~igfA 432 (493)
...+ |+|+|+|. | |.+++|+|++|+++... +...|.++|++.. +.||||++|||++|+|||++++|||||
T Consensus 275 ~~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~--~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa 352 (361)
T 1mpp_A 275 YQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDK--SGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFA 352 (361)
T ss_dssp HTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSS--SSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEE
T ss_pred cccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCC--CCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEE
Confidence 5677 99999993 4 78999999999998532 2335556888754 789999999999999999999999999
Q ss_pred eCCCCCCc
Q 044471 433 NYDCSMSV 440 (493)
Q Consensus 433 ~~~c~~~~ 440 (493)
+++|+.+.
T Consensus 353 ~~~~~~~~ 360 (361)
T 1mpp_A 353 PLASGYEN 360 (361)
T ss_dssp EBCTTTCC
T ss_pred EcccCCCC
Confidence 99999754
No 8
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=6.1e-58 Score=461.84 Aligned_cols=317 Identities=23% Similarity=0.377 Sum_probs=260.7
Q ss_pred eeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCC--CCCCCCC--CCCCcccCCcCCCCCCCccceec
Q 044471 71 VDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCS--SCNGCPG--TSGLQIQLNFFDPSSSSTASLVR 146 (493)
Q Consensus 71 ~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~--~C~~C~~--~~~~~~~~~~y~p~~SsT~~~v~ 146 (493)
+++++.+ .+++|+++|+||||+|+++|+|||||+++||+|. .|..|.. ....|...+.|||++|+|++.
T Consensus 3 v~~~l~~-----~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~-- 75 (342)
T 2qzx_A 3 VAVTLHN-----EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQN-- 75 (342)
T ss_dssp EEEEEEE-----CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEE--
T ss_pred eeEEEec-----CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCccc--
Confidence 4555543 2478999999999999999999999999999866 6764321 111233348999999999984
Q ss_pred cCCccccCCCCCCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCC
Q 044471 147 CSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDR 226 (493)
Q Consensus 147 C~~~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~ 226 (493)
.+|.|.+.|++|+.++|.+++|+|++++.. +.++.|||++...
T Consensus 76 ---------------------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~-------- 118 (342)
T 2qzx_A 76 ---------------------LNTRFDIKYGDGSYAKGKLYKDTVGIGGVS--------VRDQLFANVWSTS-------- 118 (342)
T ss_dssp ---------------------EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEEC--------
T ss_pred ---------------------CCCcEEEEeCCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEecC--------
Confidence 347899999999988999999999998643 5789999998763
Q ss_pred CcceEEeeCCCCC--------cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCCC----CCeEEecCCCCCCeeeE
Q 044471 227 AVDGIFGFGQQSM--------SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPLVPSQPHYNL 293 (493)
Q Consensus 227 ~~~GIlGLg~~~~--------s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v 293 (493)
..+||||||++.. +++.+|++||+|+ ++||+||++.....|.|+||++|+ +++.|+|+. ...+|.|
T Consensus 119 ~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v 197 (342)
T 2qzx_A 119 ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPIT-SEKKLTV 197 (342)
T ss_dssp SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEE
T ss_pred CCcCEEEEccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEecc-CCceEEE
Confidence 3589999999754 7999999999996 799999987656689999999984 689999998 4569999
Q ss_pred EEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcc--c-CccccccCCCCcCccceEEEE
Q 044471 294 NLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVS--Q-SVRPVLTKGNHTAIFPQISFN 370 (493)
Q Consensus 294 ~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~--~-~~~~~~~~~~~~~~~P~i~f~ 370 (493)
.|++|.|+++.+.. ...+||||||++++||++++++|.+++.+.+. . ....+..+|+ .+|+|+|+
T Consensus 198 ~l~~i~v~g~~~~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~---~~p~i~f~ 265 (342)
T 2qzx_A 198 GLRSVNVRGRNVDA---------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVADCK---TSGTIDFQ 265 (342)
T ss_dssp EEEEEEETTEEEEE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEECTT---CCCEEEEE
T ss_pred EEeEEEECCEecCC---------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEEECC---CCCcEEEE
Confidence 99999999988753 24699999999999999999999999988763 2 2225667784 38999999
Q ss_pred ecCCcEEEecCcccEEEeccc--CCeeEEEEEEEecCCceeechhhhcceEEEEECCCCEEEEEeCCCCCCcceeec
Q 044471 371 FAGGASLILNAQEYLIQQNSV--GGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVSTT 445 (493)
Q Consensus 371 f~gg~~~~l~p~~y~~~~~~~--~~~~~~cl~i~~~~~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~~~~i~~~ 445 (493)
|.||.+++|++++|+++.... ++...|.++++.. +.||||++|||++|+|||++++|||||+++|+.+++|+++
T Consensus 266 f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~i 341 (342)
T 2qzx_A 266 FGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES-EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSESDIVAI 341 (342)
T ss_dssp ETTTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC-SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred ECCCcEEEEcHHHhcccccccCCCCCCccEEEEecC-CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCCCeEEc
Confidence 977899999999999874211 1223455567665 5799999999999999999999999999999999999876
No 9
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.6e-57 Score=458.97 Aligned_cols=310 Identities=24% Similarity=0.402 Sum_probs=256.8
Q ss_pred ceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCC--CCCCCCC--CCCcccCCcCCCCCCCccceeccCCccccCCCCCC
Q 044471 84 VGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSS--CNGCPGT--SGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTA 159 (493)
Q Consensus 84 ~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~--C~~C~~~--~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~ 159 (493)
+++|+++|+||||||+++|++||||+++||+|.. |..|... ...|...+.|||++|+|++..
T Consensus 11 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~-------------- 76 (342)
T 3pvk_A 11 QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDL-------------- 76 (342)
T ss_dssp SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEE--------------
T ss_pred CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeec--------------
Confidence 4789999999999999999999999999998764 6444221 112223489999999999854
Q ss_pred CCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCC-
Q 044471 160 DSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQS- 238 (493)
Q Consensus 160 ~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~- 238 (493)
+|.|.+.|++|+.+.|.+++|+|+|++.. +.++.|||++... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~--------~~~GilGLg~~~~ 131 (342)
T 3pvk_A 77 ---------NTPFKIGYGDGSSSQGTLYKDTVGFGGVS--------IKNQVLADVDSTS--------IDQGILGVGYKTN 131 (342)
T ss_dssp ---------EEEEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES--------SSSCEEECSCGGG
T ss_pred ---------CCeEEEEecCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEccC--------CCccEEEecCccc
Confidence 47899999999988999999999998644 5689999998764 358999999986
Q ss_pred ------CcHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEEeec
Q 044471 239 ------MSVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQTLSI 307 (493)
Q Consensus 239 ------~s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~ 307 (493)
.+++.+|++||+|+ ++||+||++.+...|.|+|||+|+ +++.|+|+. ...+|.|.+++|.|+++.+..
T Consensus 132 ~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~~ 210 (342)
T 3pvk_A 132 EAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVT-SDRELRISLGSVEVSGKTINT 210 (342)
T ss_dssp CSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEEE
T ss_pred cccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecC-ccceEEEEEeEEEECCEEecC
Confidence 46999999999996 799999988766789999999984 689999998 456999999999999998753
Q ss_pred CCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCc---cccccCCCCcCccceEEEEecCCcEEEecCccc
Q 044471 308 DPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSV---RPVLTKGNHTAIFPQISFNFAGGASLILNAQEY 384 (493)
Q Consensus 308 ~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~---~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y 384 (493)
+ +..++|||||++++||++++++|.+++++.+.... ..+..+|. ..|+|+|+|.+|.+++||+++|
T Consensus 211 ~--------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~vp~~~~ 279 (342)
T 3pvk_A 211 D--------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEVDCN---LSGDVVFNFSKNAKISVPASEF 279 (342)
T ss_dssp E--------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEEEECSC---CCSEEEEEESTTCEEEEEGGGG
T ss_pred C--------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEEEEecC---CCCceEEEECCCCEEEEcHHHh
Confidence 2 35799999999999999999999999988775432 23677885 3599999996589999999999
Q ss_pred EEEecccCC--eeEEEEEEEecCCceeechhhhcceEEEEECCCCEEEEEeCCCCCCcceeec
Q 044471 385 LIQQNSVGG--TAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMSVNVSTT 445 (493)
Q Consensus 385 ~~~~~~~~~--~~~~cl~i~~~~~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~~~~i~~~ 445 (493)
+++....++ ...|.+++++. +.||||++|||++|+|||++++|||||+++|+.+++|.++
T Consensus 280 ~~~~~~~~g~~~~~C~~~i~~~-~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~iv~i 341 (342)
T 3pvk_A 280 AASLQGDDGQPYDKCQLLFDVN-DANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSISAL 341 (342)
T ss_dssp EEC----------CEEESEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred eeeccccCCCcCCeeEEEEeeC-CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCCCEEEe
Confidence 987432122 24566777774 7899999999999999999999999999999988888775
No 10
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=7.9e-58 Score=457.37 Aligned_cols=298 Identities=26% Similarity=0.444 Sum_probs=253.4
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCC--CCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSC--NGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTA 159 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C--~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~ 159 (493)
+.+++|+++|+||||||+++|++||||+++||+|..| ..|..+ +.|||++|+|++.
T Consensus 11 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~--------------- 68 (323)
T 3cms_A 11 YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNH-------QRFDPRKSSTFQN--------------- 68 (323)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEE---------------
T ss_pred ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCC-------CCCCCccCCCeEE---------------
Confidence 4568999999999999999999999999999999999 468766 8999999999984
Q ss_pred CCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC
Q 044471 160 DSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM 239 (493)
Q Consensus 160 ~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 239 (493)
.+|.|.+.|++|+ +.|.+++|+|++++.. +.++.|||++.+.+.. +.....+||||||++..
T Consensus 69 --------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~ 130 (323)
T 3cms_A 69 --------LGKPLSIHYGTGS-MQGILGYDTVTVSNIV--------DIQQTVGLSTQEPGDF-FTYAEFDGILGMAYPSL 130 (323)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHH-HHHSSCSEEEECSCGGG
T ss_pred --------CCcEEEEEeCCCC-eEEEEEEEEEEECCeE--------EeccEEEEEEeccccc-ccccCCceEEecCcchh
Confidence 4578999999998 6999999999998643 5679999999875521 11235699999998754
Q ss_pred ------cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEEeecC
Q 044471 240 ------SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQTLSID 308 (493)
Q Consensus 240 ------s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~ 308 (493)
+++++|++||+|+ ++||+||++... .|.|+||++|+ +++.|+|+. ...+|.|.+++|.|+++.+..+
T Consensus 131 s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~ 208 (323)
T 3cms_A 131 ASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQ-ESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVACE 208 (323)
T ss_dssp SCTTCCCHHHHHHHTTCSSSSEEEEECCTTSS-CEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEEST
T ss_pred hccCCCCHHHHHHHCCCCCCCEEEEEECCCCC-CEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeecC
Confidence 4899999999995 899999987643 39999999994 689999998 4679999999999999887532
Q ss_pred CCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEEEe
Q 044471 309 PSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQ 388 (493)
Q Consensus 309 ~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~~ 388 (493)
....+||||||++++||++++++|.+++++.... ...+..+|.....+|+|+|+| +|.+++|+|++|+++.
T Consensus 209 -------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~-~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y~~~~ 279 (323)
T 3cms_A 209 -------GGCQAILDTGTSKLVGPSSDILNIQQAIGATQNQ-YGEFDIDCDNLSYMPTVVFEI-NGKMYPLTPSAYTSQD 279 (323)
T ss_dssp -------TCEEEEECTTCCSEEECHHHHHHHHHHHTCEEET-TTEEEECTTCTTTSCCEEEEE-TTEEEEECHHHHEEEE
T ss_pred -------CCcEEEEecCCccEeCCHHHHHHHHHHhCCeecC-CCcEEEECCCCccCceEEEEE-CCEEEEECHHHhccCC
Confidence 3467999999999999999999999999876433 344667898777899999999 8899999999999972
Q ss_pred cccCCeeEEEEEEEecC--CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 389 NSVGGTAVWCIGIQKIQ--GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 389 ~~~~~~~~~cl~i~~~~--~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
...|.++|+..+ +.||||++|||++|+|||++++|||||+++
T Consensus 280 -----~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 280 -----QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp -----TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -----CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 235556788763 789999999999999999999999999864
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.5e-57 Score=453.96 Aligned_cols=297 Identities=27% Similarity=0.460 Sum_probs=255.2
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC--CCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN--GCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTA 159 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~ 159 (493)
+.+++|+++|+||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~--------------- 66 (324)
T 1am5_A 9 EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNH-------NKFKPRQSSTYVE--------------- 66 (324)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTS-------CCBCGGGCTTCEE---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCC-------CcCCCccCCCeEe---------------
Confidence 45689999999999999999999999999999999997 58766 8999999999984
Q ss_pred CCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC
Q 044471 160 DSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM 239 (493)
Q Consensus 160 ~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 239 (493)
.+|.|.+.|++|+. .|.+++|+|++++.. +.++.|||++.+.+... .....+||||||++..
T Consensus 67 --------~~~~~~i~Yg~Gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~ 128 (324)
T 1am5_A 67 --------TGKTVDLTYGTGGM-RGILGQDTVSVGGGS--------DPNQELGESQTEPGPFQ-AAAPFDGILGLAYPSI 128 (324)
T ss_dssp --------EEEEEEEECSSCEE-EEEEEEEEEESSSSC--------EEEEEEEEEEECCSTTT-TTCSSSEEEECSCGGG
T ss_pred --------CCcEEEEEECCCCe-EEEEEECceeECCcE--------EcccEEEEEEecccccc-cCCCCceEEecCCccc
Confidence 45789999999985 999999999998643 57899999998866432 3456799999999754
Q ss_pred ------cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCC----CCCeEEecCCCCCCeeeEEEeEEEEcCEEeecC
Q 044471 240 ------SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIV----EPNIVYSPLVPSQPHYNLNLQSISVNGQTLSID 308 (493)
Q Consensus 240 ------s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d----~~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~ 308 (493)
+++++|++||+|+ ++||+||++....+|.|+||++| ++++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~- 206 (324)
T 1am5_A 129 AAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAAC- 206 (324)
T ss_dssp CGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECCC-
T ss_pred cccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceeec-
Confidence 4889999999995 89999999875568999999999 3789999997 467999999999999987531
Q ss_pred CCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEEEe
Q 044471 309 PSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQ 388 (493)
Q Consensus 309 ~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~~ 388 (493)
.. ..+||||||++++||++++++|.+++++. .....+..+|.....+|+|+|+| +|.+++|+|++|+++.
T Consensus 207 ------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~--~~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y~~~~ 276 (324)
T 1am5_A 207 ------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS--ENQGEMMGNCASVQSLPDITFTI-NGVKQPLPPSAYIEGD 276 (324)
T ss_dssp ------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE--ECCCCEECCTTSSSSSCCEEEEE-TTEEEEECHHHHEEES
T ss_pred ------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc--ccCCcEEEeCCCcccCCcEEEEE-CCEEEEECHHHhcccC
Confidence 12 67999999999999999999999999876 33345677898777899999999 8899999999999974
Q ss_pred cccCCeeEEEEEEEecC------CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 389 NSVGGTAVWCIGIQKIQ------GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 389 ~~~~~~~~~cl~i~~~~------~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
...|.++|+..+ +.||||++|||++|+|||++++|||||+++
T Consensus 277 -----~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 277 -----QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp -----SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred -----CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 234556888642 679999999999999999999999999874
No 12
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=8e-57 Score=450.34 Aligned_cols=299 Identities=24% Similarity=0.426 Sum_probs=250.8
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADS 161 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~ 161 (493)
+.+.+|+++|+||||+|++.|++||||+++||+|..|..| .+ ..+.|||++|+|++.
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~-----~~~~y~~~~SsT~~~----------------- 68 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GS-----GQTKYDPNQSSTYQA----------------- 68 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CT-----TSCCBCGGGCTTCEE-----------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hc-----CCCCCCcccCCCeee-----------------
Confidence 3468999999999999999999999999999999999988 22 137999999999983
Q ss_pred CCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC--
Q 044471 162 GCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM-- 239 (493)
Q Consensus 162 ~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 239 (493)
..|.|.++|++|+.+.|.+++|+|++++.. +.++.|||++.+++.+. ....+||||||++..
T Consensus 69 ------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~f~--~~~~~GilGLg~~~~s~ 132 (325)
T 2apr_A 69 ------DGRTWSISYGDGSSASGILAKDNVNLGGLL--------IKGQTIELAKREAASFA--SGPNDGLLGLGFDTITT 132 (325)
T ss_dssp ------EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TSSCSEEEECSCGGGCS
T ss_pred ------CCCEEEEEECCCCCEEEEEEEEEEEECCEE--------ECcEEEEEEeccCcccc--cCCCceEEEeCCccccc
Confidence 458999999999988999999999998643 56789999998766442 234799999998754
Q ss_pred -----cHHHHHHhCCCCC-cceEEeecCC-CCCcceEEeCCCC----CCCeEEecCCCCCCeeeEEEeEEEEcCEEeecC
Q 044471 240 -----SVISQLSSQGLTP-RVFSHCLKGD-SNGGGILVLGEIV----EPNIVYSPLVPSQPHYNLNLQSISVNGQTLSID 308 (493)
Q Consensus 240 -----s~~~qL~~~g~i~-~~FS~~l~~~-~~~~G~l~fGg~d----~~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~ 308 (493)
+++++|++||+|+ ++||+||.+. ....|.|+||++| ++++.|+|+.++..+|.|.+++|+|++ .+.
T Consensus 133 ~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~~-- 209 (325)
T 2apr_A 133 VRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-STV-- 209 (325)
T ss_dssp STTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EEE--
T ss_pred ccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Eec--
Confidence 4899999999885 8999999653 3457999999998 478999999866789999999999999 331
Q ss_pred CCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEEEe
Q 044471 309 PSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQ 388 (493)
Q Consensus 309 ~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~~ 388 (493)
.....+||||||++++||+++|+++++++.+.+... ..+.++|.. ..+|+|+|+| +|.+++||+++|+++.
T Consensus 210 ------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~-g~~~~~C~~-~~~p~i~f~f-~g~~~~ip~~~~~~~~ 280 (325)
T 2apr_A 210 ------ASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD-GTYTISCDT-SAFKPLVFSI-NGASFQVSPDSLVFEE 280 (325)
T ss_dssp ------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-SCEEECSCG-GGCCCEEEEE-TTEEEEECGGGGEEEE
T ss_pred ------CCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC-CeEEEECCC-CCCCcEEEEE-CCEEEEECHHHEEEcC
Confidence 234589999999999999999999999998876544 456778863 3489999999 5569999999999874
Q ss_pred cccCCeeEEEEEEEecC-CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 389 NSVGGTAVWCIGIQKIQ-GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 389 ~~~~~~~~~cl~i~~~~-~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
. ...|.++|+..+ +.||||++|||++|+|||++++|||||+++
T Consensus 281 ~----~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 281 F----QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp E----TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred C----CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 2 234545577654 789999999999999999999999999863
No 13
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=8.8e-58 Score=460.65 Aligned_cols=309 Identities=26% Similarity=0.447 Sum_probs=261.6
Q ss_pred ceeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC----CCCCCCCCcccCCcCCCCCCCcccee
Q 044471 70 VVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN----GCPGTSGLQIQLNFFDPSSSSTASLV 145 (493)
Q Consensus 70 ~~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~----~C~~~~~~~~~~~~y~p~~SsT~~~v 145 (493)
.+..|+.+ +.+.+|+++|+||||||+++|++||||+++||+|..|. .|..+ +.|||++|+|++
T Consensus 7 ~~~~~l~n----~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~-------~~y~~~~SsT~~-- 73 (341)
T 3k1w_A 7 TSSVILTN----YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH-------KLFDASDSSSYK-- 73 (341)
T ss_dssp CEEEEEEE----ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTS-------CCBCGGGCTTCE--
T ss_pred CccccceE----ccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCC-------CCCCCCcCcCee--
Confidence 45667755 45689999999999999999999999999999999998 57655 899999999998
Q ss_pred ccCCccccCCCCCCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCC
Q 044471 146 RCSDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSD 225 (493)
Q Consensus 146 ~C~~~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~ 225 (493)
...|.|.+.|++|+ ++|.+++|+|+|++.. + ++.|||++..++.. +..
T Consensus 74 ---------------------~~~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v-~~~fg~~~~~~~~~-~~~ 121 (341)
T 3k1w_A 74 ---------------------HNGTELTLRYSTGT-VSGFLSQDIITVGGIT--------V-TQMFGEVTEMPALP-FML 121 (341)
T ss_dssp ---------------------EEEEEEEEEETTEE-EEEEEEEEEEEETTEE--------E-EEEEEEEEECCHHH-HTT
T ss_pred ---------------------ECCCEEEEEECCcE-EEEEEEEEEEEECCce--------e-eEEEEEEEEccccc-ccc
Confidence 34589999999999 7999999999998644 5 79999999876531 124
Q ss_pred CCcceEEeeCCCCCc------HHHHHHhCCCCC-cceEEeecCCC----CCcceEEeCCCCC----CCeEEecCCCCCCe
Q 044471 226 RAVDGIFGFGQQSMS------VISQLSSQGLTP-RVFSHCLKGDS----NGGGILVLGEIVE----PNIVYSPLVPSQPH 290 (493)
Q Consensus 226 ~~~~GIlGLg~~~~s------~~~qL~~~g~i~-~~FS~~l~~~~----~~~G~l~fGg~d~----~~~~~~pl~~~~~~ 290 (493)
...+||||||++..+ ++++|++||+|+ ++||+||.+.. ..+|.|+||++|+ +++.|+|+. +..+
T Consensus 122 ~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~ 200 (341)
T 3k1w_A 122 AEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGV 200 (341)
T ss_dssp CSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTS
T ss_pred CCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCE
Confidence 567999999998654 899999999996 89999998764 3479999999994 689999998 6789
Q ss_pred eeEEEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEE
Q 044471 291 YNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFN 370 (493)
Q Consensus 291 y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~ 370 (493)
|.|.+++|.|+++.+.. .....++|||||++++||++++++|.+++++...... |.++|.....+|+|+|+
T Consensus 201 w~v~l~~i~v~~~~~~~-------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~~g--~~~~C~~~~~~p~i~f~ 271 (341)
T 3k1w_A 201 WQIQMKGVSVGSSTLLC-------EDGCLALVDTGASYISGSTSSIEKLMEALGAKKRLFD--YVVKCNEGPTLPDISFH 271 (341)
T ss_dssp CEEEECCEEETTEEEEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSSC--EEEEGGGGGGCCCEEEE
T ss_pred EEEEEeEEEECCEEeec-------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeecCCC--eEEeCCCCCcCCcEEEE
Confidence 99999999999987532 2346799999999999999999999999988765443 77889877789999999
Q ss_pred ecCCcEEEecCcccEEEecccCCeeEEEEEEEec-----C-CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 371 FAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKI-----Q-GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 371 f~gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~-----~-~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
| +|.+++|+|++|+++... .+...|.++|+.. . +.||||++|||++|+|||++++|||||+++
T Consensus 272 f-~g~~~~l~~~~~~~~~~~-~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 272 L-GGKEYTLTSADYVFQESY-SSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp E-TTEEEEECHHHHBCCSCC-CTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred E-CCEEEEECHHHheeEccC-CCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9 789999999999987532 2234555678873 1 689999999999999999999999999986
No 14
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=5e-57 Score=452.81 Aligned_cols=298 Identities=26% Similarity=0.464 Sum_probs=253.6
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCC--CCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNG--CPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTA 159 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~--C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~ 159 (493)
+.+++|+++|+||||+|+++|++||||+++||+|..|.. |..+ +.|||++|+|++
T Consensus 10 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~---------------- 66 (329)
T 1dpj_A 10 YLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH-------SKYDHEASSSYK---------------- 66 (329)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCE----------------
T ss_pred cCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc-------CcCCcccCcCeE----------------
Confidence 456899999999999999999999999999999999986 7766 899999999998
Q ss_pred CCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC
Q 044471 160 DSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM 239 (493)
Q Consensus 160 ~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 239 (493)
.+.|.|.+.|++|+ ++|.+++|+|++++.. +.++.|||++.+.+.. +.....+||||||++..
T Consensus 67 -------~~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~-f~~~~~~GilGLg~~~~ 129 (329)
T 1dpj_A 67 -------ANGTEFAIQYGTGS-LEGYISQDTLSIGDLT--------IPKQDFAEATSEPGLT-FAFGKFDGILGLGYDTI 129 (329)
T ss_dssp -------EEEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCHHH-HTTCSCSEEEECSCGGG
T ss_pred -------ECCcEEEEEECCce-EEEEEEEEEEEECCeE--------ECCeEEEEEEecCccc-cccCCcceEEEeCCchh
Confidence 34589999999995 7999999999998643 5679999999876521 12346799999999765
Q ss_pred c------HHHHHHhCCCCC-cceEEeecCCC---CCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEEe
Q 044471 240 S------VISQLSSQGLTP-RVFSHCLKGDS---NGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQTL 305 (493)
Q Consensus 240 s------~~~qL~~~g~i~-~~FS~~l~~~~---~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~~ 305 (493)
+ ++.+|++||+|+ ++||+||.+.. ..+|.|+||++|+ +++.|+|+. ...+|.|.+++|.|+++.+
T Consensus 130 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~ 208 (329)
T 1dpj_A 130 SVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDEYA 208 (329)
T ss_dssp CGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEE
T ss_pred hccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCeEe
Confidence 4 678999999996 89999997642 2479999999994 689999997 5679999999999999887
Q ss_pred ecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccE
Q 044471 306 SIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYL 385 (493)
Q Consensus 306 ~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~ 385 (493)
.. .+..+||||||++++||++++++|.+++++. ......|.++|.....+|+|+|+| +|.+++|+|++|+
T Consensus 209 ~~--------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~-~~~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y~ 278 (329)
T 1dpj_A 209 EL--------ESHGAAIDTGTSLITLPSGLAEMINAEIGAK-KGWTGQYTLDCNTRDNLPDLIFNF-NGYNFTIGPYDYT 278 (329)
T ss_dssp EC--------SSCEEEECTTCSCEEECHHHHHHHHHHHTCE-ECTTSSEEECGGGGGGCCCEEEEE-TTEEEEECTTTSE
T ss_pred cC--------CCccEEeeCCCCcEECCHHHHHHHHHHhCCc-cCCCCeEEEECCCCCcCCcEEEEE-CCEEEEECHHHhE
Confidence 42 3467999999999999999999999999765 334456777898777899999999 7899999999999
Q ss_pred EEecccCCeeEEEEEEEec----C--CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 386 IQQNSVGGTAVWCIGIQKI----Q--GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 386 ~~~~~~~~~~~~cl~i~~~----~--~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
++.. ..|.++|+.. . +.||||++|||++|+|||++++|||||+++
T Consensus 279 ~~~~-----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 279 LEVS-----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEET-----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ecCC-----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 9752 3455578764 1 689999999999999999999999999864
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.2e-57 Score=453.68 Aligned_cols=298 Identities=26% Similarity=0.451 Sum_probs=256.0
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC--CCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN--GCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTA 159 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~ 159 (493)
+.+.+|+++|+||||||+++|++||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 8 ~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~--------------- 65 (320)
T 4aa9_A 8 YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNH-------HRFDPRKSSTFRN--------------- 65 (320)
T ss_dssp CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEE---------------
T ss_pred ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCC-------CCCCCCCCcCeEc---------------
Confidence 45789999999999999999999999999999999998 47665 8999999999984
Q ss_pred CCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC
Q 044471 160 DSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM 239 (493)
Q Consensus 160 ~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 239 (493)
.+|.|.+.|++|+ ++|.+++|+|++++.. +.++.|||++...+... .....+||||||++..
T Consensus 66 --------~~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~ 127 (320)
T 4aa9_A 66 --------LGKPLSIHYGTGS-MEGFLGYDTVTVSNIV--------DPNQTVGLSTEQPGEVF-TYSEFDGILGLAYPSL 127 (320)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHH-HSCCCSEEEECSCGGG
T ss_pred --------CCcEEEEEECCcE-EEEEEEEEEEEECCEe--------ecCeEEEEEEEcccccc-cccCcccEEecCcccc
Confidence 3478999999999 6999999999998644 57799999998765321 2345799999998754
Q ss_pred ------cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEEeecC
Q 044471 240 ------SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQTLSID 308 (493)
Q Consensus 240 ------s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~ 308 (493)
+++++|++||+|+ ++||+||.+. ..+|.|+||++|+ +++.|+|+. +..+|.|.+++|.|+++.+..+
T Consensus 128 s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~ 205 (320)
T 4aa9_A 128 ASEYSVPVFDNMMDRHLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTINGVAVACV 205 (320)
T ss_dssp SCTTCCCHHHHHHHTTCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEETTEEEEST
T ss_pred cccCCCCHHHHHHhCCCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEECCEEeccC
Confidence 4899999999996 8999999986 5689999999994 689999997 5789999999999999887532
Q ss_pred CCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEEEe
Q 044471 309 PSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQ 388 (493)
Q Consensus 309 ~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~~ 388 (493)
....++|||||++++||++++++|.+++++.... ...+.++|.....+|+|+|+| +|.+++|++++|+.+.
T Consensus 206 -------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~-~g~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~ 276 (320)
T 4aa9_A 206 -------GGCQAILDTGTSVLFGPSSDILKIQMAIGATENR-YGEFDVNCGNLRSMPTVVFEI-NGRDYPLSPSAYTSKD 276 (320)
T ss_dssp -------TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEECT-TSCEEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEE
T ss_pred -------CCcEEEEECCCCcEECCHHHHHHHHHHhCCcccC-CCcEEEeCCCCCcCceEEEEE-CCEEEEECHHHhccCC
Confidence 3467999999999999999999999999776543 345778898777899999999 8899999999999762
Q ss_pred cccCCeeEEEEEEEecC--CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 389 NSVGGTAVWCIGIQKIQ--GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 389 ~~~~~~~~~cl~i~~~~--~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
...|.++|+... +.||||++|||++|+|||++++|||||+++
T Consensus 277 -----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 -----QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp -----TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred -----CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 245656788754 679999999999999999999999999974
No 16
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.4e-56 Score=461.42 Aligned_cols=340 Identities=21% Similarity=0.409 Sum_probs=263.5
Q ss_pred ceeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCC
Q 044471 70 VVDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSD 149 (493)
Q Consensus 70 ~~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~ 149 (493)
.+.+|+..+ +.+++|+++|.||||||+|.|+|||||+++||+|.+| .+|+|++.++|.+
T Consensus 9 ~~~~pl~~~---~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~C~s 67 (403)
T 3aup_A 9 LVVLPVQND---GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPFCHS 67 (403)
T ss_dssp CEEEEEEEC---TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCCTTB
T ss_pred cEEEeeecC---CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccCCCC
Confidence 345677632 3568999999999999999999999999999998754 3589999999999
Q ss_pred ccccCCCCCC--------CCCCCCCCCCceeEEEcC-CCCeEEEEEEEEEEEeeeccCCc---cccccCcceEEEeEeec
Q 044471 150 QRCSLGLNTA--------DSGCSSESNQCSYTFQYG-DGSGTSGYYVADFLHLDTILQGS---LTTNSTAQIMFGCSTMQ 217 (493)
Q Consensus 150 ~~C~~~~~~~--------~~~c~~~~~~~~~~~~Yg-~Gs~~~G~~~~D~v~~~~~~~~~---~~~~~~~~~~FG~~~~~ 217 (493)
+.|.....+. .+.|. +..|.|.+.|+ ||+.+.|++++|+|+|++..+.. .....+.++.|||++.+
T Consensus 68 ~~C~~~~~~~c~~c~~~~~s~~~--~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~ 145 (403)
T 3aup_A 68 TQCSRANTHQCLSCPAASRPGCH--KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSF 145 (403)
T ss_dssp HHHHHTTCCCEEECSSSCBTTBC--SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGG
T ss_pred ccccCccccCccccCCCCCCCCC--CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCccc
Confidence 9998765441 23453 46899999998 78889999999999998743221 00123678999999987
Q ss_pred cCCCCCCCCCcceEEeeCCCCCcHHHHHHhCCCCCcceEEeecCCCCCcceEEeCCCCC-------C-----CeEEecCC
Q 044471 218 TGDLTKSDRAVDGIFGFGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVE-------P-----NIVYSPLV 285 (493)
Q Consensus 218 ~~~~~~~~~~~~GIlGLg~~~~s~~~qL~~~g~i~~~FS~~l~~~~~~~G~l~fGg~d~-------~-----~~~~~pl~ 285 (493)
..... .....+||||||++.++++.||++..+.+++||+||.+....+|.|+||+ |+ + ++.|+|++
T Consensus 146 ~~~~~-~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~ 223 (403)
T 3aup_A 146 LVQKG-LPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLT 223 (403)
T ss_dssp GGSSS-SSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECE
T ss_pred ccccC-CCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccc
Confidence 54311 13567999999999999999997665556899999988656789999999 62 4 89999998
Q ss_pred CC-CCeeeEEEeEEEEcCEEe-ecCCCccc--ccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccC-------cccc
Q 044471 286 PS-QPHYNLNLQSISVNGQTL-SIDPSAFS--TSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQS-------VRPV 354 (493)
Q Consensus 286 ~~-~~~y~v~l~~i~v~~~~~-~~~~~~~~--~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~-------~~~~ 354 (493)
.+ ..+|.|.|++|.|+++.+ .++...+. .....++||||||++++||+++|++|.+++.+++... ...+
T Consensus 224 ~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 303 (403)
T 3aup_A 224 ITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGL 303 (403)
T ss_dssp ECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSC
T ss_pred cCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCc
Confidence 54 379999999999999988 66654442 1234579999999999999999999999997654321 1235
Q ss_pred ccCCCCcCccceEEEEecCC--cEEEecCcccEEEecccCCeeEEEEEEEecC----CceeechhhhcceEEEEECCCCE
Q 044471 355 LTKGNHTAIFPQISFNFAGG--ASLILNAQEYLIQQNSVGGTAVWCIGIQKIQ----GQTILGDLVLKDKIFVYDLAGQR 428 (493)
Q Consensus 355 ~~~~~~~~~~P~i~f~f~gg--~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~----~~~ILG~~fl~~~yvvfD~~~~~ 428 (493)
.++|.....+|+|+|+|.|+ ++++|++++|+++.. .+..|++|+..+ +.||||+.|||++|+|||++++|
T Consensus 304 c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~----~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~r 379 (403)
T 3aup_A 304 CFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQ----PGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSR 379 (403)
T ss_dssp EECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-------CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTE
T ss_pred eEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcC----CCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCE
Confidence 56776556899999999655 699999999999753 234677998865 57999999999999999999999
Q ss_pred EEE-------EeCCCCC
Q 044471 429 IGW-------SNYDCSM 438 (493)
Q Consensus 429 igf-------A~~~c~~ 438 (493)
||| ++.+|+.
T Consensus 380 IGf~A~~~~~~~~~C~~ 396 (403)
T 3aup_A 380 VGFSTSSLHSHGVKCAD 396 (403)
T ss_dssp EEEESSCGGGGTCCGGG
T ss_pred EEEecccccccCCCccc
Confidence 999 5556654
No 17
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5.7e-57 Score=459.30 Aligned_cols=296 Identities=23% Similarity=0.401 Sum_probs=254.2
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC--CCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN--GCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTA 159 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~ 159 (493)
+.+++|+++|+||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 59 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~--------------- 116 (375)
T 1miq_A 59 VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIK-------NLYDSSKSKSYEK--------------- 116 (375)
T ss_dssp TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGS-------CCBCGGGCTTCEE---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCC-------CcCCCccCCceEE---------------
Confidence 45689999999999999999999999999999999996 68766 8999999999984
Q ss_pred CCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEee----ccCCCCCCCCCcceEEeeC
Q 044471 160 DSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTM----QTGDLTKSDRAVDGIFGFG 235 (493)
Q Consensus 160 ~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~----~~~~~~~~~~~~~GIlGLg 235 (493)
.+|.|.+.|++|+ +.|.+++|+|++++.. +.+ .|||++. ++ .+ .....+||||||
T Consensus 117 --------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~-~Fg~~~~~~~~~~-~f--~~~~~dGilGLg 175 (375)
T 1miq_A 117 --------DGTKVDITYGSGT-VKGFFSKDLVTLGHLS--------MPY-KFIEVTDTDDLEP-IY--SSVEFDGILGLG 175 (375)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEE-EEEEEEECGGGTT-HH--HHSCCCEEEECS
T ss_pred --------CCcEEEEEeCCCe-EEEEEEEEEEEEcCce--------ECc-EEEEEEecccccc-cc--ccCCCceEEeCC
Confidence 4578999999999 6999999999998643 567 9999998 44 22 124579999999
Q ss_pred CCCC------cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEE
Q 044471 236 QQSM------SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQT 304 (493)
Q Consensus 236 ~~~~------s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~ 304 (493)
++.. +++++|++||+|+ ++||+||.+.+..+|.|+|||+|+ +++.|+|+. +..+|.|.++ |.|+++.
T Consensus 176 ~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~-i~v~g~~ 253 (375)
T 1miq_A 176 WKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDLD-VHFGKQT 253 (375)
T ss_dssp SCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEEE-EEETTEE
T ss_pred CCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEEE-EEECCEE
Confidence 9865 4899999999996 899999998655689999999994 689999997 5789999999 9999987
Q ss_pred eecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEEEecCccc
Q 044471 305 LSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEY 384 (493)
Q Consensus 305 ~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y 384 (493)
+ ....+||||||++++||++++++|.+++++.+......+..+|.. ..+|+|+|+| +|.+++|+|++|
T Consensus 254 ~----------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~-~~~P~i~f~f-~g~~~~l~~~~y 321 (375)
T 1miq_A 254 M----------EKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDN-KEMPTLEFKS-ANNTYTLEPEYY 321 (375)
T ss_dssp E----------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEECTTSSCEEEETTC-TTCCCEEEEC-SSCEEEECGGGS
T ss_pred c----------ccceEEecCCCccEEcCHHHHHHHHHHhCCcccCCCCeEEEECCC-CCCCcEEEEE-CCEEEEECHHHh
Confidence 6 235799999999999999999999999988665555557778876 7899999999 889999999999
Q ss_pred EEEecccCCeeEEEEEEEecC---CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 385 LIQQNSVGGTAVWCIGIQKIQ---GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 385 ~~~~~~~~~~~~~cl~i~~~~---~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
+++... .+...|.++|++.+ +.||||++|||++|+|||++++|||||+++
T Consensus 322 i~~~~~-~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 322 MNPILE-VDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EEESSS-SSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EeeccC-CCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 998532 13345656898876 689999999999999999999999999874
No 18
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.3e-56 Score=449.73 Aligned_cols=300 Identities=28% Similarity=0.520 Sum_probs=254.9
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCC--CCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNG--CPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTA 159 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~--C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~ 159 (493)
+.+++|+++|+||||+|+++|++||||+++||+|..|.. |..+ +.|||++|+|++.
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~--------------- 66 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSH-------SRFNPSESSTYST--------------- 66 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEE---------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCC-------CcCCCccCCCeEE---------------
Confidence 346899999999999999999999999999999999974 8766 8999999999984
Q ss_pred CCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC
Q 044471 160 DSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM 239 (493)
Q Consensus 160 ~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 239 (493)
.+|.|.+.|++|+. .|.+++|+|++++.. +.++.|||++.+.+... .....+||||||++..
T Consensus 67 --------~~~~~~i~Yg~gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~ 128 (329)
T 1htr_B 67 --------NGQTFSLQYGSGSL-TGFFGYDTLTVQSIQ--------VPNQEFGLSENEPGTNF-VYAQFDGIMGLAYPAL 128 (329)
T ss_dssp --------EEEEEEEEETTEEE-EEEEEEEEEEETTEE--------EEEEEEEEESSCSSGGG-GGCSCCEEEECCCCSC
T ss_pred --------CCcEEEEEeCCCCe-EEEEEeeeEEEcceE--------ECceEEEEEEEcccccc-ccCCCceEEecCCCcc
Confidence 45789999999985 999999999998643 56799999998765321 2356799999999865
Q ss_pred ------cHHHHHHhCCCCC-cceEEeecCCCCC-cceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEEeec
Q 044471 240 ------SVISQLSSQGLTP-RVFSHCLKGDSNG-GGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQTLSI 307 (493)
Q Consensus 240 ------s~~~qL~~~g~i~-~~FS~~l~~~~~~-~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~ 307 (493)
+++++|++||+|+ ++||+||++.... +|.|+||++|+ +++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (329)
T 1htr_B 129 SVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASGW 207 (329)
T ss_dssp CCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECCT
T ss_pred cccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceeee
Confidence 4899999999995 8999999886444 79999999994 689999998 568999999999999987531
Q ss_pred CCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEEE
Q 044471 308 DPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQ 387 (493)
Q Consensus 308 ~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~ 387 (493)
......+||||||++++||++++++|.+++++..... ..+..+|.....+|+|+|+| +|.+++|+|++|+++
T Consensus 208 ------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~~-g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y~~~ 279 (329)
T 1htr_B 208 ------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDEY-GQFLVNCNSIQNLPSLTFII-NGVEFPLPPSSYILS 279 (329)
T ss_dssp ------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEECTT-SCEEECGGGGGGSCCEEEEE-TTEEEEECHHHHEEE
T ss_pred ------cCCCceEEEecCCccEECCHHHHHHHHHHhCCeecCC-CeEEEeCCCcccCCcEEEEE-CCEEEEECHHHhccc
Confidence 1235689999999999999999999999998765433 34667887767899999999 889999999999998
Q ss_pred ecccCCeeEEEEEEEecC------C-ceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 388 QNSVGGTAVWCIGIQKIQ------G-QTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 388 ~~~~~~~~~~cl~i~~~~------~-~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
.. +.|.++|+..+ + .||||++|||++|+|||++++|||||+++
T Consensus 280 ~~-----g~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 280 NN-----GYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CS-----SCEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC-----CEEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 53 34555787642 4 79999999999999999999999999864
No 19
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.8e-56 Score=448.57 Aligned_cols=302 Identities=26% Similarity=0.430 Sum_probs=248.6
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADS 161 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~ 161 (493)
+.+++|+++|+||||+|+++|++||||+++||+|..|..|..+ ..+.|||++|+|++.+
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~-----~~~~y~~~~SsT~~~~---------------- 70 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT-----GHAIYTPSKSSTSKKV---------------- 70 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCGGGCTTCEEC----------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC-----CCCcCCcccCcCceEc----------------
Confidence 3468999999999999999999999999999999999876422 1289999999999854
Q ss_pred CCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC--
Q 044471 162 GCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM-- 239 (493)
Q Consensus 162 ~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 239 (493)
+.|.|.+.|++|+.++|.+++|+|++++.. +.++.|||++.+++.+. .....+||||||++..
T Consensus 71 ------~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 71 ------SGASWSISYGDGSSSSGDVYTDKVTIGGFS--------VNTQGVESATRVSTEFV-QDTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp ------TTCBEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCC
T ss_pred ------CCCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EcceEEEEEEecCcccc-ccCCCceeEEeCcccccc
Confidence 347899999999988999999999998643 56799999998765432 1245799999998643
Q ss_pred -------cHHHHHHhCCCCCcceEEeecCCCCCcceEEeCCCC----CCCeEEecCCCCCCeeeEEEeEEEEcCEEeecC
Q 044471 240 -------SVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIV----EPNIVYSPLVPSQPHYNLNLQSISVNGQTLSID 308 (493)
Q Consensus 240 -------s~~~qL~~~g~i~~~FS~~l~~~~~~~G~l~fGg~d----~~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~ 308 (493)
+++++|+++ +-+++||+||.+. .+|.|+||++| ++++.|+|+.++..+|.|.|++|.|+++.+.
T Consensus 136 ~~~~~~~~~~~~l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~-- 210 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASS-LAEPLFTADLRHG--QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN-- 210 (329)
T ss_dssp CBSSCCCCHHHHHHTT-SSSSEEEEECCSS--SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--
T ss_pred cCCCCCCCHHHHHHHh-cCCCEEEEEecCC--CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--
Confidence 378999986 3358999999863 57999999998 4789999998667899999999999997652
Q ss_pred CCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHh-hcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEEE
Q 044471 309 PSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITS-SVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQ 387 (493)
Q Consensus 309 ~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~-~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~ 387 (493)
.....+||||||++++||++++++|.+++.+ .++.....|.++|. ..+|+|+|+| +|.+++||+++|+++
T Consensus 211 ------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~~~~~~~~~~~C~--~~~P~i~f~f-~g~~~~ip~~~~~~~ 281 (329)
T 3c9x_A 211 ------RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQYDNQQEGVVFDCD--EDLPSFSFGV-GSSTITIPGDLLNLT 281 (329)
T ss_dssp ------SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEEETTTTEEEEETT--CCCCCEEEEE-TTEEEEECGGGGEEE
T ss_pred ------CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEEcCCCCEEEEECC--CCCCcEEEEE-CCEEEEECHHHeeee
Confidence 2345799999999999999999999999844 34433445667885 5789999999 789999999999987
Q ss_pred ecccCCeeEEEEEEEecC--CceeechhhhcceEEEEECCCCEEEEEeC
Q 044471 388 QNSVGGTAVWCIGIQKIQ--GQTILGDLVLKDKIFVYDLAGQRIGWSNY 434 (493)
Q Consensus 388 ~~~~~~~~~~cl~i~~~~--~~~ILG~~fl~~~yvvfD~~~~~igfA~~ 434 (493)
... ++...|.++|+..+ +.||||++|||++|+|||++++|||||+.
T Consensus 282 ~~~-~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 282 PLE-EGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp ESS-TTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred ccC-CCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 421 22344545687764 78999999999999999999999999974
No 20
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.7e-56 Score=448.72 Aligned_cols=300 Identities=25% Similarity=0.417 Sum_probs=248.1
Q ss_pred cceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCCC
Q 044471 83 VVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSG 162 (493)
Q Consensus 83 ~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~~ 162 (493)
.+++|+++|+||||+|+++|++||||+++||+|..|..|.. ..+.|||++|+|++.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~---------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLS---------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecC----------------
Confidence 46789999999999999999999999999999999987643 13899999999998653
Q ss_pred CCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC---
Q 044471 163 CSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM--- 239 (493)
Q Consensus 163 c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 239 (493)
.|.|.+.|++|+.++|.+++|+|++++.. +.++.|||++.+++.+. .....+||||||++..
T Consensus 71 ------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 71 ------GATWSISYGDGSSSSGDVYTDTVSVGGLT--------VTGQAVESAKKVSSSFT-EDSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp ------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCCC
T ss_pred ------CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EeeeEEEEEEecCcccc-ccCCCceEEEecccccccc
Confidence 37899999999988999999999998643 57899999998765432 1245799999998654
Q ss_pred ------cHHHHHHhCCCCCcceEEeecCCCCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEEeecCC
Q 044471 240 ------SVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDP 309 (493)
Q Consensus 240 ------s~~~qL~~~g~i~~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~~ 309 (493)
+++++|+++ +-+++||+||.+. .+|.|+||++|+ +++.|+|+.+++.+|.|.+++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--- 209 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS-LDSPVFTADLGYH--APGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--- 209 (329)
T ss_dssp BSSCCCCHHHHHTTT-SSSSEEEEECCSS--SCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE---
T ss_pred CcCCCCCHHHHHHHh-ccCcEEEEEccCC--CCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc---
Confidence 378999987 3358999999863 579999999993 689999998667899999999999997653
Q ss_pred CcccccCCCcEEEeccCcceeccHHHHHHHHHHHH-hhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEEEe
Q 044471 310 SAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAIT-SSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQ 388 (493)
Q Consensus 310 ~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~-~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~~ 388 (493)
.....+||||||++++||++++++|.+++. +.++.....|..+|. ..+|+|+|+| ||.+++||+++|+++.
T Consensus 210 -----~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~ip~~~~~~~~ 281 (329)
T 1oew_A 210 -----STSIDGIADTGTTLLYLPATVVSAYWAQVSGAKSSSSVGGYVFPCS--ATLPSFTFGV-GSARIVIPGDYIDFGP 281 (329)
T ss_dssp -----EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCEEETTTTEEEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEE
T ss_pred -----CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcEEcCCCCEEEEECC--CCCCcEEEEE-CCEEEEECHHHeeeee
Confidence 124579999999999999999999999984 444433445667885 5789999999 8999999999999874
Q ss_pred cccCCeeEEEEEEEecC--CceeechhhhcceEEEEEC-CCCEEEEEeC
Q 044471 389 NSVGGTAVWCIGIQKIQ--GQTILGDLVLKDKIFVYDL-AGQRIGWSNY 434 (493)
Q Consensus 389 ~~~~~~~~~cl~i~~~~--~~~ILG~~fl~~~yvvfD~-~~~~igfA~~ 434 (493)
.. ++...|.++|+..+ +.||||++|||++|+|||+ +++|||||+.
T Consensus 282 ~~-~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 282 IS-TGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp SS-TTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred cC-CCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 21 22345555677654 7899999999999999999 9999999974
No 21
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.9e-56 Score=463.66 Aligned_cols=296 Identities=20% Similarity=0.367 Sum_probs=257.7
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC--CCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN--GCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTA 159 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~ 159 (493)
+.+.+|+++|+||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 134 ~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~-------~~ydps~SsT~~~--------------- 191 (451)
T 3qvc_A 134 LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESK-------NHYDSSKSKTYEK--------------- 191 (451)
T ss_dssp GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTS-------CCBCGGGCTTCEE---------------
T ss_pred cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCC-------CCCCCCCCccccc---------------
Confidence 45789999999999999999999999999999999994 68776 8999999999983
Q ss_pred CCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEee----ccCCCCCCCCCcceEEeeC
Q 044471 160 DSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTM----QTGDLTKSDRAVDGIFGFG 235 (493)
Q Consensus 160 ~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~----~~~~~~~~~~~~~GIlGLg 235 (493)
.+|.|.+.|++|+ +.|.+++|+|++++.. +. +.|||++. +++ +. ....+||||||
T Consensus 192 --------~~~~f~i~YgdGs-~~G~~~~Dtv~igg~~--------v~-~~Fg~a~~t~~~~~~-f~--~~~~dGILGLg 250 (451)
T 3qvc_A 192 --------DDTPVKLTSKAGT-ISGIFSKDLVTIGKLS--------VP-YKFIEMTEIVGFEPF-YS--ESDVDGVFGLG 250 (451)
T ss_dssp --------EEEEEEEECSSEE-EEEEEEEEEEEETTEE--------EE-EEEEEEEEEEECTTH-HH--HSCCCEEEECS
T ss_pred --------CCCEEEEEECCCE-EEEEEEEEEEEECCEE--------EE-EEEEEEEeccccCCC-cc--CCCCCEEEecC
Confidence 4579999999999 7999999999998654 56 89999998 555 32 34579999999
Q ss_pred CCCC------cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEE
Q 044471 236 QQSM------SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQT 304 (493)
Q Consensus 236 ~~~~------s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~ 304 (493)
++.. +++++|++||+|+ ++||+||.+.+..+|.|+|||+|+ +++.|+|+. ++.+|.|.++ |.|+++
T Consensus 251 ~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~l~-I~Vgg~- 327 (451)
T 3qvc_A 251 WKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVDLD-VHFGNV- 327 (451)
T ss_dssp SBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEEEE-EEETTE-
T ss_pred CCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEEEE-EEECCc-
Confidence 9754 5899999999996 799999998766789999999994 689999998 6789999999 999987
Q ss_pred eecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEEEecCccc
Q 044471 305 LSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEY 384 (493)
Q Consensus 305 ~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y 384 (493)
. .....++|||||++++||++++++|.+++++........|.++|. ...+|+|+|+| ||.+++|||++|
T Consensus 328 ~---------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~~~g~y~v~C~-~~~~P~itf~f-gg~~i~lp~~~y 396 (451)
T 3qvc_A 328 S---------SKKANVILDSATSVITVPTEFFNQFVESASVFKVPFLSLYVTTCG-NTKLPTLEYRS-PNKVYTLEPKQY 396 (451)
T ss_dssp E---------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECTTSSCEEEETT-CTTCCCEEEEE-TTEEEEECHHHH
T ss_pred c---------CCCceEEEeCCCccccCCHHHHHHHHHHcCCeecCCCCeEEeeCC-cCcCCcEEEEE-CCEEEEEcHHHh
Confidence 1 124579999999999999999999999998876665566778897 67899999999 899999999999
Q ss_pred EEEecccCCeeEEEEEEEecC---CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 385 LIQQNSVGGTAVWCIGIQKIQ---GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 385 ~~~~~~~~~~~~~cl~i~~~~---~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
+++... .+...|.+++++.+ +.||||++|||++|+|||++++|||||+++
T Consensus 397 i~~~~~-~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 397 LEPLEN-IFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEECTT-TSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred eeeccc-CCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 998643 23457778898875 679999999999999999999999999974
No 22
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.7e-56 Score=466.58 Aligned_cols=311 Identities=25% Similarity=0.446 Sum_probs=254.1
Q ss_pred eeeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC---CCCCCCCCcccCCcCCCCCCCccceecc
Q 044471 71 VDFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN---GCPGTSGLQIQLNFFDPSSSSTASLVRC 147 (493)
Q Consensus 71 ~~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~---~C~~~~~~~~~~~~y~p~~SsT~~~v~C 147 (493)
..+|+.+ +.+++|+++|+||||||+|+|+|||||+++||+|..|. .|..+ +.|||++|+||+
T Consensus 42 ~~~~l~n----~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~-------~~y~~~~SsT~~---- 106 (478)
T 1qdm_A 42 DIVALKN----YMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLH-------SRYKAGASSTYK---- 106 (478)
T ss_dssp CSGGGCC----GGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGS-------CCBCGGGCTTCB----
T ss_pred ceEEeEe----ccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCC-------CCCCcccCCCee----
Confidence 3455654 45689999999999999999999999999999999996 58766 899999999997
Q ss_pred CCccccCCCCCCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCC
Q 044471 148 SDQRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRA 227 (493)
Q Consensus 148 ~~~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~ 227 (493)
..++.|.+.|++|+ ++|++++|+|++++.. +.++.|||++.+.+.. +....
T Consensus 107 -------------------~~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~-f~~~~ 157 (478)
T 1qdm_A 107 -------------------KNGKPAAIQYGTGS-IAGYFSEDSVTVGDLV--------VKDQEFIEATKEPGIT-FLVAK 157 (478)
T ss_dssp -------------------CCCCEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCBSH-HHHCS
T ss_pred -------------------eCCcEEEEEcCCCC-eEEEEEEEEEEECCeE--------ECCEEEEEEEecCCcc-ccccc
Confidence 45689999999998 6999999999998644 5678999999876531 11345
Q ss_pred cceEEeeCCCCCc------HHHHHHhCCCCC-cceEEeecCCC--CCcceEEeCCCCC----CCeEEecCCCCCCeeeEE
Q 044471 228 VDGIFGFGQQSMS------VISQLSSQGLTP-RVFSHCLKGDS--NGGGILVLGEIVE----PNIVYSPLVPSQPHYNLN 294 (493)
Q Consensus 228 ~~GIlGLg~~~~s------~~~qL~~~g~i~-~~FS~~l~~~~--~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~ 294 (493)
++||||||++..+ ++.+|++||+|+ ++||+||++.. ..+|.|+||++|+ +++.|+|+. ...+|.|.
T Consensus 158 ~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v~ 236 (478)
T 1qdm_A 158 FDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQFD 236 (478)
T ss_dssp SSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEEE
T ss_pred ccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEEE
Confidence 7999999998765 678999999996 89999998752 3579999999995 579999997 56799999
Q ss_pred EeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhc---------------------------
Q 044471 295 LQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSV--------------------------- 347 (493)
Q Consensus 295 l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~--------------------------- 347 (493)
+++|.|+++.+.++ ..+..+||||||+++++|++++++|.+++++..
T Consensus 237 l~~i~v~g~~~~~~------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p 310 (478)
T 1qdm_A 237 MGDVLVGGKSTGFC------AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQP 310 (478)
T ss_dssp ECCEEETTEECSTT------TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCH
T ss_pred EeEEEECCEEEeec------CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccCh
Confidence 99999999887543 235689999999999999999999999886531
Q ss_pred ----------------------------------------------------------------------------ccCc
Q 044471 348 ----------------------------------------------------------------------------SQSV 351 (493)
Q Consensus 348 ----------------------------------------------------------------------------~~~~ 351 (493)
....
T Consensus 311 ~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~ 390 (478)
T 1qdm_A 311 KKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPM 390 (478)
T ss_dssp HHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSS
T ss_pred hhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCC
Confidence 0012
Q ss_pred cccccCCCCcCccceEEEEecCCcEEEecCcccEEEecccCCeeEEEEEEEecC------CceeechhhhcceEEEEECC
Q 044471 352 RPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQ------GQTILGDLVLKDKIFVYDLA 425 (493)
Q Consensus 352 ~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~------~~~ILG~~fl~~~yvvfD~~ 425 (493)
..+.++|+....+|+|+|+| ||++++|+|++|+++... ++...|..+|+..+ +.||||+.|||++|+|||++
T Consensus 391 g~~~v~C~~~~~lP~i~f~~-gg~~~~l~p~~yi~~~~~-~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~ 468 (478)
T 1qdm_A 391 GESAVDCGSLGSMPDIEFTI-GGKKFALKPEEYILKVGE-GAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYG 468 (478)
T ss_dssp SCCEECGGGGTTCCCEEEEE-TTEEEEECHHHHEEECSC-GGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETT
T ss_pred CeEEeecccccccccEEEEE-CCEEEEEChHHhEEEccC-CCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECC
Confidence 23556776667899999999 889999999999998542 11234445677532 67999999999999999999
Q ss_pred CCEEEEEeC
Q 044471 426 GQRIGWSNY 434 (493)
Q Consensus 426 ~~~igfA~~ 434 (493)
++|||||++
T Consensus 469 ~~rIGfA~a 477 (478)
T 1qdm_A 469 KLRIGFAKA 477 (478)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEeC
Confidence 999999986
No 23
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=6.5e-56 Score=444.55 Aligned_cols=295 Identities=18% Similarity=0.302 Sum_probs=251.8
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC--CC--CCCCCCcccCCcCCCCCCCccceeccCCccccCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN--GC--PGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLN 157 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~--~C--~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~ 157 (493)
+.+.+|+++|+|| +|+++|++||||+++||+|..|. .| ..+ +.|||++| |++.
T Consensus 14 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~-------~~y~~~~S-T~~~------------- 70 (330)
T 1yg9_A 14 FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNL-------QKYEKLKP-KYIS------------- 70 (330)
T ss_dssp EECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTC-------CCCCCSSC-EEEE-------------
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCccccc-------CccCCCCC-ceEE-------------
Confidence 5568999999999 89999999999999999999997 68 665 89999999 9973
Q ss_pred CCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCC
Q 044471 158 TADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQ 237 (493)
Q Consensus 158 ~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~ 237 (493)
.++.|.+.|++|+. .|.+++|+|++++.. +.++.|||++.+...+ .....+||||||++
T Consensus 71 ----------~~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--------~~~~~fg~~~~~~~~f--~~~~~~GilGLg~~ 129 (330)
T 1yg9_A 71 ----------DGNVQVKFFDTGSA-VGRGIEDSLTISQLT--------TSQQDIVLADELSQEV--CILSADVVVGIAAP 129 (330)
T ss_dssp ----------EEEEEEEETTTEEE-EEEEEEEEEEETTEE--------EEEEEEEEEEEECTHH--HHTTCSEEEECSCT
T ss_pred ----------CCCEEEEEECCceE-EEEEEEEEEEECCEE--------EcCeEEEEEEEccccc--ccccCceEEEcCcc
Confidence 45789999999996 999999999998643 5679999999873322 12457999999998
Q ss_pred CCc-------HHHHHHhCCCCCcceEEeecCCCCC--cceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEE
Q 044471 238 SMS-------VISQLSSQGLTPRVFSHCLKGDSNG--GGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQT 304 (493)
Q Consensus 238 ~~s-------~~~qL~~~g~i~~~FS~~l~~~~~~--~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~ 304 (493)
..+ ++++|++||+|+++||+||++.... +|.|+||++|+ +++.|+|+. +..+|.|.+++|.|+++.
T Consensus 130 ~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~ 208 (330)
T 1yg9_A 130 GCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDTT 208 (330)
T ss_dssp TSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTEE
T ss_pred hhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCEE
Confidence 766 8999999998888999999876333 79999999994 689999998 678999999999999987
Q ss_pred eecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCcc-cc-ccCCCCcCccceEEEEecCCcEEEecCc
Q 044471 305 LSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVR-PV-LTKGNHTAIFPQISFNFAGGASLILNAQ 382 (493)
Q Consensus 305 ~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~-~~-~~~~~~~~~~P~i~f~f~gg~~~~l~p~ 382 (493)
+. ..+..+||||||++++||++++++|.+++++....... .| .++|.....+|+|+|+| ||.+++|+|+
T Consensus 209 ~~--------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~~g~~~~~~~~C~~~~~~p~i~f~f-gg~~~~l~~~ 279 (330)
T 1yg9_A 209 VA--------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVEKTTTRRICKLDCSKIPSLPDVTFVI-NGRNFNISSQ 279 (330)
T ss_dssp EE--------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEEECSSCEEEEECGGGGGGSCCEEEEE-TTEEEEECHH
T ss_pred Ec--------CCCcEEEEecCCccccCCHHHHHHHHHHhCCcccCCCceEEEEEECCCccccCcEEEEE-CCEEEEECHH
Confidence 63 23467999999999999999999999999876544331 45 67887667899999999 8999999999
Q ss_pred ccEEEecccCCeeEEEEEEEecC--CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 383 EYLIQQNSVGGTAVWCIGIQKIQ--GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 383 ~y~~~~~~~~~~~~~cl~i~~~~--~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
+|+++. ...|.++|++.. +.||||++|||++|+|||++++|||||+++
T Consensus 280 ~y~~~~-----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 280 YYIQQN-----GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp HHEEEE-----TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HhcccC-----CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 999975 235556888643 689999999999999999999999999874
No 24
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=3.5e-56 Score=461.10 Aligned_cols=304 Identities=21% Similarity=0.388 Sum_probs=254.4
Q ss_pred eeeccCCCccccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC--CCCCCCCCcccCCcCCCCCCCccceeccCC
Q 044471 72 DFSVEGTYDPFVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN--GCPGTSGLQIQLNFFDPSSSSTASLVRCSD 149 (493)
Q Consensus 72 ~~~~~~~~~~~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~ 149 (493)
..|+.+ +.+++|+++|+||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 129 ~~~L~n----~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~-------~~ydps~SsT~~~----- 192 (453)
T 2bju_A 129 NIELVD----FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTK-------HLYDSSKSRTYEK----- 192 (453)
T ss_dssp EEEEEE----ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGS-------CCBCGGGCTTCEE-----
T ss_pred ceeeEe----cCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCC-------CcCCCccCCceeE-----
Confidence 455543 45689999999999999999999999999999999996 67765 8999999999984
Q ss_pred ccccCCCCCCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeecc--CCCCCCCCC
Q 044471 150 QRCSLGLNTADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQT--GDLTKSDRA 227 (493)
Q Consensus 150 ~~C~~~~~~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~--~~~~~~~~~ 227 (493)
.+|.|.+.|++|+ +.|.+++|+|++++.. +. +.|||++.++ +... ....
T Consensus 193 ------------------~~~~~~i~YgdGs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~~~g~~f-~~~~ 243 (453)
T 2bju_A 193 ------------------DGTKVEMNYVSGT-VSGFFSKDLVTVGNLS--------LP-YKFIEVIDTNGFEPTY-TAST 243 (453)
T ss_dssp ------------------EEEEEEEECSSSE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECGGGTTHH-HHSS
T ss_pred ------------------CCcEEEEEcCCCC-eEEEEEEEEEEEeCcE--------EE-EEEEEEEEecccCccc-cccC
Confidence 4578999999999 6999999999998643 56 8999999876 4321 1245
Q ss_pred cceEEeeCCCCC------cHHHHHHhCCCCC-cceEEeecCCCCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEe
Q 044471 228 VDGIFGFGQQSM------SVISQLSSQGLTP-RVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQ 296 (493)
Q Consensus 228 ~~GIlGLg~~~~------s~~~qL~~~g~i~-~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~ 296 (493)
.+||||||++.. +++++|++||+|+ ++||+||.+.+..+|.|+|||+|+ +++.|+|+. ...+|.|.++
T Consensus 244 ~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~ 322 (453)
T 2bju_A 244 FDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD 322 (453)
T ss_dssp CCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE
T ss_pred CceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE
Confidence 799999999754 4889999999996 899999998655689999999994 689999997 5679999999
Q ss_pred EEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcE
Q 044471 297 SISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGAS 376 (493)
Q Consensus 297 ~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~ 376 (493)
|.|++ .+ . ....+||||||++++||++++++|.+++++........+..+|.. ..+|+|+|+| +|.+
T Consensus 323 -I~Vgg-~~-~--------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~~~g~~~~v~C~~-~~~P~itf~f-gg~~ 389 (453)
T 2bju_A 323 -AHVGN-IM-L--------EKANCIVDSGTSAITVPTDFLNKMLQNLDVIKVPFLPFYVTLCNN-SKLPTFEFTS-ENGK 389 (453)
T ss_dssp -EEETT-EE-E--------EEEEEEECTTCCSEEECHHHHHHHTTTSSCEECTTSSCEEEETTC-TTCCCEEEEC-SSCE
T ss_pred -EEECc-EE-e--------ccccEEEcCCCCeEecCHHHHHHHHHHhCCcccCCCceEEEecCC-CCCCcEEEEE-CCEE
Confidence 99999 33 1 245799999999999999999999999877533222256778876 7899999999 8899
Q ss_pred EEecCcccEEEecccCCeeEEEEEEEecC---CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 377 LILNAQEYLIQQNSVGGTAVWCIGIQKIQ---GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 377 ~~l~p~~y~~~~~~~~~~~~~cl~i~~~~---~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
++|+|++|+++... ++...|.++|++.+ +.||||++|||++|+|||++++|||||+++
T Consensus 390 ~~l~~~~yi~~~~~-~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 390 YTLEPEYYLQHIED-VGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp EEECHHHHEEECTT-TSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhEeeccc-CCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999999998532 13345656888775 589999999999999999999999999975
No 25
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.7e-55 Score=458.66 Aligned_cols=318 Identities=23% Similarity=0.363 Sum_probs=253.8
Q ss_pred ceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCCCC
Q 044471 84 VGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSGC 163 (493)
Q Consensus 84 ~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~~c 163 (493)
+..|+++|+||||+|+|+|+|||||+++||+|..| |..+ +.|||++|+||+.
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~~-------~~y~~~~SsT~~~------------------- 124 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLH-------RYYQRQLSSTYRD------------------- 124 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCS-------CCCCGGGCTTCEE-------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cccC-------CcccCCCCCCccc-------------------
Confidence 45899999999999999999999999999999988 6554 8999999999984
Q ss_pred CCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC----
Q 044471 164 SSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM---- 239 (493)
Q Consensus 164 ~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 239 (493)
.+|.|.+.|++|+. .|.+++|+|+|++.. +....+.|+|+....+.+. .....+||||||++..
T Consensus 125 ----~~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~------~~~~~~~~~~~~~~~~~~~-~~~~~dGIlGLg~~~~s~~~ 192 (455)
T 3lpj_A 125 ----LRKGVYVPYTQGKW-EGELGTDLVSIPHGP------NVTVRANIAAITESDKFFI-NGSNWEGILGLAYAEIARPD 192 (455)
T ss_dssp ----EEEEEEEECSSCEE-EEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSC
T ss_pred ----CCccEEEEeCCeEE-EEEEEEEEEEECCCc------ceeeEEEEEEEEccCcccc-cCCCcceEEEeCcccccccc
Confidence 34789999999995 999999999998421 0112367898887765432 2356799999998643
Q ss_pred ----cHHHHHHhCCCCCcceEEeecCC----------CCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEc
Q 044471 240 ----SVISQLSSQGLTPRVFSHCLKGD----------SNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVN 301 (493)
Q Consensus 240 ----s~~~qL~~~g~i~~~FS~~l~~~----------~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~ 301 (493)
+++++|++|++|+++||+||.+. ...+|.|+||++|+ +++.|+|+. ...+|.|.+++|.|+
T Consensus 193 ~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~ 271 (455)
T 3lpj_A 193 DSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEIN 271 (455)
T ss_dssp TTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEEET
T ss_pred CCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEEEEC
Confidence 58899999999988999999753 24579999999994 689999998 468999999999999
Q ss_pred CEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccC--c----cccccCCCCcC-----ccceEEEE
Q 044471 302 GQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQS--V----RPVLTKGNHTA-----IFPQISFN 370 (493)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~--~----~~~~~~~~~~~-----~~P~i~f~ 370 (493)
++.+.++...+ ....+||||||++++||++++++|.+++.+..... . ..+...|.... .+|+|+|+
T Consensus 272 g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~ 348 (455)
T 3lpj_A 272 GQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLY 348 (455)
T ss_dssp TEECCCCGGGG---GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEE
T ss_pred CEEcccccccc---CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEE
Confidence 99987654433 24679999999999999999999999999986421 1 11245676533 49999999
Q ss_pred ecCCc-----EEEecCcccEEEecccCCeeEEEEE--EEecCCceeechhhhcceEEEEECCCCEEEEEeCCCCCC--cc
Q 044471 371 FAGGA-----SLILNAQEYLIQQNSVGGTAVWCIG--IQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSMS--VN 441 (493)
Q Consensus 371 f~gg~-----~~~l~p~~y~~~~~~~~~~~~~cl~--i~~~~~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~~--~~ 441 (493)
|.|+. +++|+|++|+++....++....|++ +....+.||||++|||++|+|||++++|||||+++|+.. .+
T Consensus 349 f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~ 428 (455)
T 3lpj_A 349 LMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFR 428 (455)
T ss_dssp EECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSC
T ss_pred EcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccccccccC
Confidence 95443 5999999999986532221234554 444447899999999999999999999999999999753 44
Q ss_pred eeec
Q 044471 442 VSTT 445 (493)
Q Consensus 442 i~~~ 445 (493)
+.++
T Consensus 429 i~~i 432 (455)
T 3lpj_A 429 TAAV 432 (455)
T ss_dssp CCEE
T ss_pred ccee
Confidence 4443
No 26
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2e-54 Score=442.92 Aligned_cols=318 Identities=23% Similarity=0.391 Sum_probs=252.3
Q ss_pred ceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCCCC
Q 044471 84 VGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSGC 163 (493)
Q Consensus 84 ~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~~c 163 (493)
+..|+++|+||||+|+++|+|||||+++||+|..|..|. +.|||++|+|++..
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~---------~~f~~~~SsT~~~~------------------ 64 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTERSSTYRSK------------------ 64 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS---------CCCCGGGCTTCEEE------------------
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc---------cCcccccCccceeC------------------
Confidence 468999999999999999999999999999999887652 78999999999844
Q ss_pred CCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC----
Q 044471 164 SSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM---- 239 (493)
Q Consensus 164 ~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 239 (493)
+|.|.++|++|+. +|++++|+|+|++... ....+.|+|.....+.+. .....+||||||++.+
T Consensus 65 -----~~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~dGilGLg~~~~s~~~ 131 (383)
T 2ewy_A 65 -----GFDVTVKYTQGSW-TGFVGEDLVTIPKGFN------TSFLVNIATIFESENFFL-PGIKWNGILGLAYATLAKPS 131 (383)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEEETTTEE------EEEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSC
T ss_pred -----CceEEEEECCcEE-EEEEEEEEEEECCCcc------ceeEEEEEEEEeecceee-ccCcCceEEecCchhccccc
Confidence 4789999999995 9999999999974211 012467888776555332 2346799999998754
Q ss_pred ----cHHHHHHhCCCCCcceEEeecC-------CCCCcceEEeCCCC----CCCeEEecCCCCCCeeeEEEeEEEEcCEE
Q 044471 240 ----SVISQLSSQGLTPRVFSHCLKG-------DSNGGGILVLGEIV----EPNIVYSPLVPSQPHYNLNLQSISVNGQT 304 (493)
Q Consensus 240 ----s~~~qL~~~g~i~~~FS~~l~~-------~~~~~G~l~fGg~d----~~~~~~~pl~~~~~~y~v~l~~i~v~~~~ 304 (493)
+++++|++|+.++++||+||.+ ....+|.|+||++| ++++.|+|+. ...+|+|.+++|.|+++.
T Consensus 132 ~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~ 210 (383)
T 2ewy_A 132 SSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGGQS 210 (383)
T ss_dssp TTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETTEE
T ss_pred ccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECCEE
Confidence 4788999999887899999964 23457999999998 4789999998 467999999999999999
Q ss_pred eecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCc------cccccCCCCc-----CccceEEEEecC
Q 044471 305 LSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSV------RPVLTKGNHT-----AIFPQISFNFAG 373 (493)
Q Consensus 305 ~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~------~~~~~~~~~~-----~~~P~i~f~f~g 373 (493)
+.++...+ ....+||||||++++||++++++|.+++.+...... ..+...|... ..+|+|+|+|.|
T Consensus 211 ~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g 287 (383)
T 2ewy_A 211 LNLDCREY---NADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRD 287 (383)
T ss_dssp CCCCTTTT---TSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEEC
T ss_pred cccccccc---CCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECC
Confidence 87665443 246799999999999999999999999998764311 1124566532 368999999955
Q ss_pred C-----cEEEecCcccEEEecccCCeeEEE-EEEEecCCceeechhhhcceEEEEECCCCEEEEEeCCCCC--Ccceeec
Q 044471 374 G-----ASLILNAQEYLIQQNSVGGTAVWC-IGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSM--SVNVSTT 445 (493)
Q Consensus 374 g-----~~~~l~p~~y~~~~~~~~~~~~~c-l~i~~~~~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~--~~~i~~~ 445 (493)
+ .+++|+|++|+.+....++...|. +++.+.++.||||++|||++|+|||++++|||||+++|+. +.+|+++
T Consensus 288 ~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i 367 (383)
T 2ewy_A 288 ENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAGAAVSEI 367 (383)
T ss_dssp SSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEESSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBSSSCBCEEE
T ss_pred CCCCceEEEEEChHHheeecccCCCCceeEEEEecCCCCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCcCCcceeee
Confidence 3 379999999998753222223443 3566555789999999999999999999999999999974 5777776
No 27
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.6e-54 Score=442.95 Aligned_cols=318 Identities=19% Similarity=0.405 Sum_probs=250.0
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADS 161 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~ 161 (493)
+.+.+|+++|+|||| |+|||||+++||+|..|. +++.++|.++.|.....+...
T Consensus 11 ~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~---------------------~~~~~~C~s~~C~~~~~~~~~ 64 (381)
T 1t6e_X 11 PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ---------------------PPAEIPCSSPTCLLANAYPAP 64 (381)
T ss_dssp TTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC---------------------CCCCCBTTSHHHHHHHSSCCT
T ss_pred CCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC---------------------CCCccCCCCchhccccCCCCC
Confidence 457899999999998 999999999999987541 356678888888754433334
Q ss_pred CCCC-------CCCCc-eeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEe
Q 044471 162 GCSS-------ESNQC-SYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFG 233 (493)
Q Consensus 162 ~c~~-------~~~~~-~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlG 233 (493)
.|+. .+..| .|.++|+||+.++|++++|+|++++..+.....+...++.|||++.+...-. ....|||||
T Consensus 65 sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~--~~~~dGIlG 142 (381)
T 1t6e_X 65 GCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL--PRGSTGVAG 142 (381)
T ss_dssp TCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS--CTTEEEEEE
T ss_pred CCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC--CCCCceEEE
Confidence 5543 13456 5999999999879999999999996543222222223457899987632111 356899999
Q ss_pred eCCCCCcHHHHHHhCCCCCcceEEeecCCCCCcceEEeCCCCC------CCeEEecCCCC--CCeeeEEEeEEEEcCEEe
Q 044471 234 FGQQSMSVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVE------PNIVYSPLVPS--QPHYNLNLQSISVNGQTL 305 (493)
Q Consensus 234 Lg~~~~s~~~qL~~~g~i~~~FS~~l~~~~~~~G~l~fGg~d~------~~~~~~pl~~~--~~~y~v~l~~i~v~~~~~ 305 (493)
||++.++++.||+++++++++||+||.+. .+|.|+||+++. +++.|+|++.+ .++|.|+|++|+|+++.+
T Consensus 143 Lg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~ 220 (381)
T 1t6e_X 143 LANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRV 220 (381)
T ss_dssp CSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEEC
T ss_pred eCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEe
Confidence 99999999999999997789999999875 579999999874 68999999854 357889999999999998
Q ss_pred ecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhccc------------CccccccCCCCc---------Ccc
Q 044471 306 SIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQ------------SVRPVLTKGNHT---------AIF 364 (493)
Q Consensus 306 ~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~------------~~~~~~~~~~~~---------~~~ 364 (493)
.++...|. +.++||||||++++||+++|++|.+++.+++.. ........|... ..+
T Consensus 221 ~~~~~~~~---~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 297 (381)
T 1t6e_X 221 PVPEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAV 297 (381)
T ss_dssp CCCTTCSC---TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECC
T ss_pred cCCHHHcc---CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcC
Confidence 77665553 467999999999999999999999999886631 011122455432 268
Q ss_pred ceEEEEecCCcEEEecCcccEEEecccCCeeEEEEEEEecC---------CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 365 PQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQ---------GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 365 P~i~f~f~gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~---------~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
|+|+|+|.||++++|++++|+++.. .+.+|++|+..+ +.||||+.|||++|+|||++++|||||+++
T Consensus 298 P~i~f~f~gg~~~~l~~~~y~~~~~----~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 298 PNVQLGLDGGSDWTMTGKNSMVDVK----QGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp CCEEEEETTSCEEEECHHHHEEEEE----TTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred CeEEEEECCCcEEEeCCCeEEEEcC----CCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 9999999667999999999999753 246789998754 479999999999999999999999999976
Q ss_pred C
Q 044471 436 C 436 (493)
Q Consensus 436 c 436 (493)
.
T Consensus 374 ~ 374 (381)
T 1t6e_X 374 H 374 (381)
T ss_dssp T
T ss_pred C
Confidence 4
No 28
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=3.3e-54 Score=442.96 Aligned_cols=317 Identities=22% Similarity=0.366 Sum_probs=253.0
Q ss_pred ceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCCCC
Q 044471 84 VGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSGC 163 (493)
Q Consensus 84 ~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~~c 163 (493)
+..|+++|+||||+|+++|+|||||+++||+|..|..| + +.|||++|+|++..
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~--~-------~~y~~~~SsT~~~~------------------ 72 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL--H-------RYYQRQLSSTYRDL------------------ 72 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC--S-------CCCCGGGCTTCEEE------------------
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc--c-------CCcCcccCCCceeC------------------
Confidence 46899999999999999999999999999999988654 2 78999999999844
Q ss_pred CCCCCCceeEEEcCCCCeEEEEEEEEEEEeee-ccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC---
Q 044471 164 SSESNQCSYTFQYGDGSGTSGYYVADFLHLDT-ILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM--- 239 (493)
Q Consensus 164 ~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~-~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 239 (493)
.|.|.++|++|+. +|.+++|+|++++ ... ...+.|++.....+.+. .....+||||||++..
T Consensus 73 -----~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~~-------~~~~~~~~~~~~~~~f~-~~~~~dGIlGLg~~~~s~~ 138 (395)
T 2qp8_A 73 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPNV-------TVRANIAAITESDKFFI-NGSNWEGILGLAYAEIARP 138 (395)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCSC-------EEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSS
T ss_pred -----CceEEEEECCcEE-EEEEEeEEEEECCCCCc-------eEEEEEEEEEccCcccc-cccCccceEEcCchhhccC
Confidence 4789999999996 9999999999973 221 12356888776555332 2346799999998654
Q ss_pred -----cHHHHHHhCCCCCcceEEeecCC----------CCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEE
Q 044471 240 -----SVISQLSSQGLTPRVFSHCLKGD----------SNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISV 300 (493)
Q Consensus 240 -----s~~~qL~~~g~i~~~FS~~l~~~----------~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v 300 (493)
+++++|++|+.++++||+||.+. ...+|.|+||++|+ +++.|+|+. +..+|.|.|++|+|
T Consensus 139 ~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v 217 (395)
T 2qp8_A 139 DDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEI 217 (395)
T ss_dssp CTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEEE
T ss_pred CCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEEE
Confidence 48899999999988999999753 13579999999994 689999998 46799999999999
Q ss_pred cCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCc---c---ccccCCCCc-----CccceEEE
Q 044471 301 NGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSV---R---PVLTKGNHT-----AIFPQISF 369 (493)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~---~---~~~~~~~~~-----~~~P~i~f 369 (493)
+++.+.++...+ ....+||||||++++||+++|++|.+++.+...... . .+...|... ..+|+|+|
T Consensus 218 ~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f 294 (395)
T 2qp8_A 218 NGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISL 294 (395)
T ss_dssp TTEECCCCGGGG---GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEE
T ss_pred CCEEcccCcccc---CCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEE
Confidence 999987655433 235799999999999999999999999998764321 1 123456542 25899999
Q ss_pred EecCCc-----EEEecCcccEEEecccCCe-eEEE-EEEEecCCceeechhhhcceEEEEECCCCEEEEEeCCCCC--Cc
Q 044471 370 NFAGGA-----SLILNAQEYLIQQNSVGGT-AVWC-IGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSM--SV 440 (493)
Q Consensus 370 ~f~gg~-----~~~l~p~~y~~~~~~~~~~-~~~c-l~i~~~~~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~--~~ 440 (493)
+|.|+. +++|+|++|+.+....++. ..|. +++.+.++.||||++|||++|+|||++++|||||+++|+. +.
T Consensus 295 ~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~ 374 (395)
T 2qp8_A 295 YLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEF 374 (395)
T ss_dssp EEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSS
T ss_pred EEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCCCCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCCC
Confidence 996543 7999999999986431122 3443 5777655789999999999999999999999999999984 56
Q ss_pred ceeec
Q 044471 441 NVSTT 445 (493)
Q Consensus 441 ~i~~~ 445 (493)
+|+++
T Consensus 375 ~i~~i 379 (395)
T 2qp8_A 375 RTAAV 379 (395)
T ss_dssp CCCEE
T ss_pred cccee
Confidence 66665
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.5e-54 Score=443.81 Aligned_cols=318 Identities=23% Similarity=0.357 Sum_probs=250.5
Q ss_pred ceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCCCC
Q 044471 84 VGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSGC 163 (493)
Q Consensus 84 ~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~~c 163 (493)
+..|+++|+||||||+++|+|||||+++||+|.+| |..+ +.|||++|+|++.
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~~-------~~y~~~~SsT~~~------------------- 78 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLH-------RYYQRQLSSTYRD------------------- 78 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCS-------CCCCGGGCTTCEE-------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cccc-------CCcCcccCccccc-------------------
Confidence 35899999999999999999999999999999988 5444 8999999999984
Q ss_pred CCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCC-----
Q 044471 164 SSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQS----- 238 (493)
Q Consensus 164 ~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~----- 238 (493)
.+|.|.+.|++|+. .|.+++|+|+|++... ....+.|++.....+.+. .....+||||||++.
T Consensus 79 ----~~~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~------~~~~~~~~~~~~~~~~~~-~~~~~dGIlGLg~~~~s~~~ 146 (402)
T 3vf3_A 79 ----LRKGVYVPYTQGKW-EGELGTDLVSIPHGPN------VTVRANIAAITESDKFFI-NGSNWEGILGLAYAEIARPD 146 (402)
T ss_dssp ----EEEEEEEECSSCEE-EEEEEEEEEECTTSCS------CEEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSC
T ss_pred ----CCCEEEEEECcEEE-EEEEEEEEEEECCccc------cceeeeEEEEEccccccc-cCCCccceEEcCchhhcccC
Confidence 45789999999995 9999999999984210 012345888877665432 235679999999864
Q ss_pred ---CcHHHHHHhCCCCCcceEEeecCC----------CCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEc
Q 044471 239 ---MSVISQLSSQGLTPRVFSHCLKGD----------SNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVN 301 (493)
Q Consensus 239 ---~s~~~qL~~~g~i~~~FS~~l~~~----------~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~ 301 (493)
.+++++|++|++|+++||+||.+. ...+|.|+||++|+ +++.|+|+. ...+|.|.+++|.|+
T Consensus 147 ~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~ 225 (402)
T 3vf3_A 147 DSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEIN 225 (402)
T ss_dssp TTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEEET
T ss_pred CcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEEEC
Confidence 358899999999988999999742 34579999999994 689999998 467999999999999
Q ss_pred CEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhccc---Ccc---ccccCCCCcC-----ccceEEEE
Q 044471 302 GQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQ---SVR---PVLTKGNHTA-----IFPQISFN 370 (493)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~---~~~---~~~~~~~~~~-----~~P~i~f~ 370 (493)
++.+.++...+ ....+||||||++++||++++++|.+++.+.... ... .+...|.... .+|+|+|+
T Consensus 226 g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~ 302 (402)
T 3vf3_A 226 GQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLY 302 (402)
T ss_dssp TEECCCCGGGG---GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEE
T ss_pred CEEeccccccc---CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEE
Confidence 99987654433 2467999999999999999999999999998531 111 1245675433 69999999
Q ss_pred ecCCc-----EEEecCcccEEEecccCCeeEEEE--EEEecCCceeechhhhcceEEEEECCCCEEEEEeCCCCC--Ccc
Q 044471 371 FAGGA-----SLILNAQEYLIQQNSVGGTAVWCI--GIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSM--SVN 441 (493)
Q Consensus 371 f~gg~-----~~~l~p~~y~~~~~~~~~~~~~cl--~i~~~~~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~--~~~ 441 (493)
|.|+. +++|+|++|+.+....++....|+ ++....+.||||++|||++|+|||++++|||||+++|+. +.+
T Consensus 303 f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~ 382 (402)
T 3vf3_A 303 LMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFR 382 (402)
T ss_dssp EECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCSSC
T ss_pred EecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccCcccCcc
Confidence 95443 599999999998543111123454 455444789999999999999999999999999999995 455
Q ss_pred eeec
Q 044471 442 VSTT 445 (493)
Q Consensus 442 i~~~ 445 (493)
++++
T Consensus 383 i~~i 386 (402)
T 3vf3_A 383 TAAV 386 (402)
T ss_dssp BCEE
T ss_pred cccc
Confidence 5444
No 30
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=5.2e-54 Score=429.94 Aligned_cols=296 Identities=26% Similarity=0.401 Sum_probs=245.3
Q ss_pred cceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCC--CCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCC
Q 044471 83 VVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGC--PGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTAD 160 (493)
Q Consensus 83 ~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C--~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~ 160 (493)
.+++|+++|+|| +|+++|++||||+++||+|..|..| ..+ +.|||++|+ ++
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~-------~~y~~~~Ss-~~----------------- 64 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGH-------DLYTPSSSA-TK----------------- 64 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTS-------CCCBCCSSC-EE-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCC-------CCCCchhcC-Cc-----------------
Confidence 357899999999 8999999999999999999999865 344 899999998 54
Q ss_pred CCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCCc
Q 044471 161 SGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSMS 240 (493)
Q Consensus 161 ~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~s 240 (493)
.+.|.|.++|++|+.++|.+++|+|++++.. +.++.|||++.+++.+. .....+||||||++..+
T Consensus 65 ------~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s 129 (325)
T 1ibq_A 65 ------LSGYSWDISYGDGSSASGDVYRDTVTVGGVT--------TNKQAVEAASKISSEFV-QDTANDGLLGLAFSSIN 129 (325)
T ss_dssp ------CTTCBEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH-TSTTCCEEEECSCGGGC
T ss_pred ------cCCCEEEEEeCCCCEEEEEEEEeEEEECCEE--------EcceEEEEEEecCcccc-ccCCCceEEEeCccccc
Confidence 3568999999999988999999999998643 57799999998765432 22467999999997543
Q ss_pred ---------HHHHHHhCCCCCcceEEeecCCCCCcceEEeCCCC----CCCeEEecCCCCCCeeeEEEeEEEEcCEEeec
Q 044471 241 ---------VISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIV----EPNIVYSPLVPSQPHYNLNLQSISVNGQTLSI 307 (493)
Q Consensus 241 ---------~~~qL~~~g~i~~~FS~~l~~~~~~~G~l~fGg~d----~~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~ 307 (493)
++++|+++ +.+++||+||.+. .+|.|+||++| ++++.|+|+.++..+|.|++++|.|+++.+.
T Consensus 130 ~~~p~~~~~~~~~l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~- 205 (325)
T 1ibq_A 130 TVQPKAQTTFFDTVKSQ-LDSPLFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS- 205 (325)
T ss_dssp CCBSSCCCCHHHHHGGG-SSSSEEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB-
T ss_pred ccCcCCCCCHHHHHHHh-cCCcEEEEEecCC--CCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc-
Confidence 78999987 3358999999863 47999999998 4789999998667899999999999997652
Q ss_pred CCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHH-hhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEE
Q 044471 308 DPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAIT-SSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLI 386 (493)
Q Consensus 308 ~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~-~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~ 386 (493)
.....+||||||++++||++++++|.+++. +........+.++|. ..+|+|+|+| ||.+++||+++|++
T Consensus 206 -------~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~ 275 (325)
T 1ibq_A 206 -------SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQESYEAGGYVFSCS--TDLPDFTVVI-GDYKAVVPGKYINY 275 (325)
T ss_dssp -------SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBCCSSSSSCEEETT--CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred -------CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceEcCcCCeEEEEcC--CCCCcEEEEE-CCEEEEECHHHhcc
Confidence 234689999999999999999999999984 444433445667885 5789999999 89999999999998
Q ss_pred EecccCCeeEEEEEEEecC--CceeechhhhcceEEEEECCCCEEEEEeCC
Q 044471 387 QQNSVGGTAVWCIGIQKIQ--GQTILGDLVLKDKIFVYDLAGQRIGWSNYD 435 (493)
Q Consensus 387 ~~~~~~~~~~~cl~i~~~~--~~~ILG~~fl~~~yvvfD~~~~~igfA~~~ 435 (493)
+... .+...|.++|+..+ +.||||++|||++|+|||++++|||||++.
T Consensus 276 ~~~~-~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 276 APVS-TGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp EESS-TTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cccC-CCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 7421 12345555687754 789999999999999999999999999863
No 31
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.2e-54 Score=432.27 Aligned_cols=290 Identities=25% Similarity=0.400 Sum_probs=245.1
Q ss_pred ceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCCCCC
Q 044471 84 VGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTADSGC 163 (493)
Q Consensus 84 ~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~~~c 163 (493)
+..|+++|+||||+|+++|+|||||+++||+|. +.|+|++|+++
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~--------------------- 54 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSA--------------------- 54 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEE---------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCccc---------------------
Confidence 368999999999999999999999999999874 58999888764
Q ss_pred CCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC----
Q 044471 164 SSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM---- 239 (493)
Q Consensus 164 ~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 239 (493)
.+|.|.+.|++|+ ++|.+++|+|+|++.. +.++.|||++.+.+ + ...+||||||++..
T Consensus 55 ----~~~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~--------v~~~~fg~~~~~~~-~----~~~~GilGLg~~~~s~~~ 116 (340)
T 1wkr_A 55 ----TSDKVSVTYGSGS-FSGTEYTDTVTLGSLT--------IPKQSIGVASRDSG-F----DGVDGILGVGPVDLTVGT 116 (340)
T ss_dssp ----EEEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEES-C----TTCSEEEECSCGGGGTTS
T ss_pred ----cCceEEEEECCcE-EEEEEEEEEEEECCEE--------EcceEEEEEEccCC-C----cCCCcEEECCcccccccc
Confidence 3478999999998 6999999999998643 57899999998765 2 24799999998653
Q ss_pred ----------cHHHHHHhCCCCC-cceEEeecCC---CCCcceEEeCCCC----CCCeEEecCCCC---CCeeeEEEeEE
Q 044471 240 ----------SVISQLSSQGLTP-RVFSHCLKGD---SNGGGILVLGEIV----EPNIVYSPLVPS---QPHYNLNLQSI 298 (493)
Q Consensus 240 ----------s~~~qL~~~g~i~-~~FS~~l~~~---~~~~G~l~fGg~d----~~~~~~~pl~~~---~~~y~v~l~~i 298 (493)
+++++|++||+|+ ++||+||.+. ....|.|+||++| ++++.|+|+..+ ..+|.|. ++|
T Consensus 117 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 117 LSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp EESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeE
Confidence 4689999999996 8999999864 2357999999998 378999999864 5799999 999
Q ss_pred EEcC-EEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCCCCcCccceEEEEecCCcEE
Q 044471 299 SVNG-QTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKGNHTAIFPQISFNFAGGASL 377 (493)
Q Consensus 299 ~v~~-~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~ 377 (493)
.|++ +.+.. ...+||||||++++||++++++|.+++++.++.....+.++|.....+|+|+|+| +|.++
T Consensus 196 ~v~~~~~l~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~~~g~~~~~C~~~~~~p~i~f~f-~g~~~ 265 (340)
T 1wkr_A 196 RYGSSTSILS---------STAGIVDTGTTLTLIASDAFAKYKKATGAVADNNTGLLRLTTAQYANLQSLFFTI-GGQTF 265 (340)
T ss_dssp EETTTEEEEE---------EEEEEECTTBCSEEECHHHHHHHHHHHTCEECTTTSSEEECHHHHHTCCCEEEEE-TTEEE
T ss_pred EECCCeEccC---------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcCCCCeEEeeccccccCCcEEEEE-CCEEE
Confidence 9998 77631 2479999999999999999999999998877665566778887666899999999 88999
Q ss_pred EecCcccEEEeccc---C-CeeEEEEEEEecC------CceeechhhhcceEEEEECCCCEEEEEeCCCCC
Q 044471 378 ILNAQEYLIQQNSV---G-GTAVWCIGIQKIQ------GQTILGDLVLKDKIFVYDLAGQRIGWSNYDCSM 438 (493)
Q Consensus 378 ~l~p~~y~~~~~~~---~-~~~~~cl~i~~~~------~~~ILG~~fl~~~yvvfD~~~~~igfA~~~c~~ 438 (493)
+|+|++|+++.... + ....||+++.+.+ ..||||++|||++|+|||++++|||||+++|+.
T Consensus 266 ~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 336 (340)
T 1wkr_A 266 ELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTT 336 (340)
T ss_dssp EECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTT
T ss_pred EEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCC
Confidence 99999999864321 1 1346878887632 469999999999999999999999999999985
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.1e-53 Score=427.15 Aligned_cols=292 Identities=26% Similarity=0.413 Sum_probs=242.5
Q ss_pred cceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCC--CCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCC
Q 044471 83 VVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGC--PGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTAD 160 (493)
Q Consensus 83 ~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C--~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~ 160 (493)
.+.+|+++|+|| ||+++|+|||||+++||+|..|..| ..+ +.|||++|+ ++
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~-------~~y~~~~Ss-~~----------------- 65 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGH-------DYYTPGSSA-QK----------------- 65 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTC-------CCBCCCTTC-EE-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCC-------CCCCccccC-Cc-----------------
Confidence 357899999999 8999999999999999999999865 444 899999998 54
Q ss_pred CCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC-
Q 044471 161 SGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM- 239 (493)
Q Consensus 161 ~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~- 239 (493)
.++|.|.+.|++|+.++|.+++|+|++++.. +.++.|||++.+++.+. .....+||||||++..
T Consensus 66 ------~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s 130 (323)
T 1izd_A 66 ------IDGATWSISYGDGSSASGDVYKDKVTVGGVS--------YDSQAVESAEKVSSEFT-QDTANDGLLGLAFSSIN 130 (323)
T ss_dssp ------EEEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH-HCTTCCEEEECSCGGGC
T ss_pred ------cCCCeEEEEcCCCCeEEEEEEEEEEEECCEE--------ECceEEEEEEecccccc-ccCCCceEEecCccccc
Confidence 2458999999999988999999999998644 56799999998765432 1245799999999754
Q ss_pred --------cHHHHHHhCCCCCcceEEeecCCCCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEEeec
Q 044471 240 --------SVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQTLSI 307 (493)
Q Consensus 240 --------s~~~qL~~~g~i~~~FS~~l~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~ 307 (493)
+++++|+++ +.+++||+||.+. .+|.|+||++|+ +++.|+|+.++..+|.|++++|+|++ .+.
T Consensus 131 ~~~p~~~~~~~~~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~- 205 (323)
T 1izd_A 131 TVQPTPQKTFFDNVKSS-LSEPIFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS- 205 (323)
T ss_dssp CCBSSCCCCHHHHHGGG-SSSSEEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE-
T ss_pred ccCCCCCCCHHHHHHHh-ccCcEEEEEccCC--CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc-
Confidence 378999987 3358999999864 479999999995 57999999866789999999999999 542
Q ss_pred CCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHH-hhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEE
Q 044471 308 DPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAIT-SSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLI 386 (493)
Q Consensus 308 ~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~-~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~ 386 (493)
.....+||||||++++||++++++|.+++. +.++.....+.++|. ..+|+|+|+| ||.+++||+++|++
T Consensus 206 -------~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~ 275 (323)
T 1izd_A 206 -------SDSITGIADTGTTLLLLDDSIVDAYYEQVNGASYDSSQGGYVFPSS--ASLPDFSVTI-GDYTATVPGEYISF 275 (323)
T ss_dssp -------CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEEETTTTEEEEETT--CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred -------CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEEcCcCCEEEEECC--CCCceEEEEE-CCEEEecCHHHeEE
Confidence 234679999999999999999999999985 444433445667785 5789999999 89999999999998
Q ss_pred EecccCCeeEEEEEEEecC--CceeechhhhcceEEEEECCCCEEEEEeC
Q 044471 387 QQNSVGGTAVWCIGIQKIQ--GQTILGDLVLKDKIFVYDLAGQRIGWSNY 434 (493)
Q Consensus 387 ~~~~~~~~~~~cl~i~~~~--~~~ILG~~fl~~~yvvfD~~~~~igfA~~ 434 (493)
+.. +...|.++|++.+ +.||||++|||++|+|||++++|||||++
T Consensus 276 ~~~---~~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 276 ADV---GNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp EEC---STTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ecC---CCCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 742 2334545588764 78999999999999999999999999986
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=8.8e-54 Score=427.94 Aligned_cols=292 Identities=22% Similarity=0.382 Sum_probs=242.9
Q ss_pred cceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCCCC--CCCCCCcccCCcCCCCCCCccceeccCCccccCCCCCCC
Q 044471 83 VVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCNGC--PGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNTAD 160 (493)
Q Consensus 83 ~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~~C--~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~~~ 160 (493)
.+.+|+++|+|| ||+++|++||||+++||+|..|..| ..+ +.|||++|+ ++
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~-------~~y~~~~Ss-~~----------------- 65 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGH-------SVYNPSATG-KE----------------- 65 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTS-------CCBCHHHHC-EE-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCC-------CCCCcccCC-cc-----------------
Confidence 357899999999 9999999999999999999999865 344 899999998 54
Q ss_pred CCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC-
Q 044471 161 SGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM- 239 (493)
Q Consensus 161 ~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~- 239 (493)
.++|.|+++|++|+.++|.+++|+|++++.. +.++.|||++.+++.+. .....+||||||++..
T Consensus 66 ------~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s 130 (323)
T 1bxo_A 66 ------LSGYTWSISYGDGSSASGNVFTDSVTVGGVT--------AHGQAVQAAQQISAQFQ-QDTNNDGLLGLAFSSIN 130 (323)
T ss_dssp ------EEEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH-TCTTCSEEEECSCGGGC
T ss_pred ------cCCCeEEEEeCCCCeEEEEEEEEEEEECCEE--------ECcEEEEEEEecCcccc-cCCCCceEEEeCccccc
Confidence 2458999999999988999999999998643 57799999998765432 2246799999998643
Q ss_pred --------cHHHHHHhCCCCCcceEEeecCCCCCcceEEeCCCC----CCCeEEecCCCCCCeeeEEEeEEEEcCEEeec
Q 044471 240 --------SVISQLSSQGLTPRVFSHCLKGDSNGGGILVLGEIV----EPNIVYSPLVPSQPHYNLNLQSISVNGQTLSI 307 (493)
Q Consensus 240 --------s~~~qL~~~g~i~~~FS~~l~~~~~~~G~l~fGg~d----~~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~ 307 (493)
+++++|+++ +.+++||+||++. .+|.|+||++| ++++.|+|+.++..+|.|++++|+|++ ..
T Consensus 131 ~~~~~~~~~~~~~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~-- 204 (323)
T 1bxo_A 131 TVQPQSQTTFFDTVKSS-LAQPLFAVALKHQ--QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QS-- 204 (323)
T ss_dssp CCBSSCCCCHHHHHGGG-BSSSEEEEECCSS--SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EE--
T ss_pred ccccCCCCCHHHHHHHh-cCCcEEEEEEeCC--CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-cc--
Confidence 478999987 3348999999863 47999999999 478999999866789999999999998 21
Q ss_pred CCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHH-hhcccCccccccCCCCcCccceEEEEecCCcEEEecCcccEE
Q 044471 308 DPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAIT-SSVSQSVRPVLTKGNHTAIFPQISFNFAGGASLILNAQEYLI 386 (493)
Q Consensus 308 ~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~-~~~~~~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~ 386 (493)
.....+||||||++++||++++++|.+++. +..+.....+.++|. ..+|+|+|+| ||.+++||+++|++
T Consensus 205 -------~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~~~~g~~~~~C~--~~~P~i~f~f-gg~~~~l~~~~~~~ 274 (323)
T 1bxo_A 205 -------GDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDSNAGGYVFDCS--TNLPDFSVSI-SGYTATVPGSLINY 274 (323)
T ss_dssp -------EEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEEETTTTEEEECTT--CCCCCEEEEE-TTEEEEECHHHHEE
T ss_pred -------CCCceEEEeCCCCceeCCHHHHHHHHHhCCCceEcCcCCEEEEECC--CCCceEEEEE-CCEEEEECHHHeEE
Confidence 134579999999999999999999999984 444434445667885 5789999999 89999999999998
Q ss_pred EecccCCeeEEEEEEEecC--CceeechhhhcceEEEEECCCCEEEEEeC
Q 044471 387 QQNSVGGTAVWCIGIQKIQ--GQTILGDLVLKDKIFVYDLAGQRIGWSNY 434 (493)
Q Consensus 387 ~~~~~~~~~~~cl~i~~~~--~~~ILG~~fl~~~yvvfD~~~~~igfA~~ 434 (493)
+.. ++...|.++|++.+ +.||||++|||++|+|||++++|||||++
T Consensus 275 ~~~--~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 275 GPS--GDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp EEC--SSSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred ecc--CCCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 753 22345556688764 78999999999999999999999999986
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=5.9e-43 Score=334.34 Aligned_cols=217 Identities=28% Similarity=0.464 Sum_probs=185.5
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC---CCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN---GCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLNT 158 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~---~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~~ 158 (493)
+.+.+|+++|+||||+|+++|+|||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 10 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~-------------- 68 (239)
T 1b5f_A 10 DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAH-------SMYESSDSSTYKE-------------- 68 (239)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTS-------CCBCGGGCTTCEE--------------
T ss_pred cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCC-------CCCCCccCCCeee--------------
Confidence 45689999999999999999999999999999999996 57766 8999999999984
Q ss_pred CCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeeeccCCccccccCcceEEEeEeeccCCCCCCCCCcceEEeeCCCC
Q 044471 159 ADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDTILQGSLTTNSTAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQS 238 (493)
Q Consensus 159 ~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~ 238 (493)
.+|.|.+.|++|+ +.|.+++|+|++++.. +.++.|||+..+.+.. +.....+||||||++.
T Consensus 69 ---------~~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~-f~~~~~~GilGLg~~~ 129 (239)
T 1b5f_A 69 ---------NGTFGAIIYGTGS-ITGFFSQDSVTIGDLV--------VKEQDFIEATDEADNV-FLHRLFDGILGLSFQT 129 (239)
T ss_dssp ---------EEEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHH-HTTCSCCEEEECSCCS
T ss_pred ---------CCcEEEEEECCCc-EEEEEEEEEEEECCcE--------EccEEEEEEEeccCcc-ccccCcceEEecCccc
Confidence 3478999999998 6999999999998643 5679999998865421 1235679999999998
Q ss_pred Cc--HHHHHHhCCCCC-cceEEeecCC--CCCcceEEeCCCCC----CCeEEecCCCCCCeeeEEEeEEEEcCEEeecCC
Q 044471 239 MS--VISQLSSQGLTP-RVFSHCLKGD--SNGGGILVLGEIVE----PNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDP 309 (493)
Q Consensus 239 ~s--~~~qL~~~g~i~-~~FS~~l~~~--~~~~G~l~fGg~d~----~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~~ 309 (493)
.+ ++.+|++|++|+ ++||+||.+. ...+|.|+||++|+ +++.|+|+. ...+|.|.|++|.|+++.+.++.
T Consensus 130 ~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~ 208 (239)
T 1b5f_A 130 ISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGFCA 208 (239)
T ss_dssp SSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCTTT
T ss_pred cccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEecccC
Confidence 76 678899999996 8999999874 24579999999994 579999997 46799999999999998875432
Q ss_pred CcccccCCCcEEEeccCcceeccHHHHHHHHHHHHh
Q 044471 310 SAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITS 345 (493)
Q Consensus 310 ~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~ 345 (493)
....+||||||++++||++++++|.+++++
T Consensus 209 ------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 209 ------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp ------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred ------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 346799999999999999999999998865
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=9.7e-38 Score=298.87 Aligned_cols=218 Identities=23% Similarity=0.368 Sum_probs=180.7
Q ss_pred CcceEEEeEeeccCCCCCCCCCcceEEeeCCCCC------cHHHHHHhCCCCC-cceEEeecCCCCC--cceEEeCCCCC
Q 044471 206 TAQIMFGCSTMQTGDLTKSDRAVDGIFGFGQQSM------SVISQLSSQGLTP-RVFSHCLKGDSNG--GGILVLGEIVE 276 (493)
Q Consensus 206 ~~~~~FG~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~qL~~~g~i~-~~FS~~l~~~~~~--~G~l~fGg~d~ 276 (493)
+.++.|||++.+++.. +.....+||||||++.. +++++|++||+|+ ++||+||++.... +|.|+||++|+
T Consensus 5 v~~~~Fg~~~~~~~~~-f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~ 83 (241)
T 1lya_B 5 VERQVFGEATKQPGIT-FIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDS 83 (241)
T ss_dssp EEEEEEEEEEECCSST-TTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCCG
T ss_pred ECCeEEEEEEEccCCc-cccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcCH
Confidence 5679999999887643 23456899999999764 4789999999996 8999999886443 79999999994
Q ss_pred ----CCeEEecCCCCCCeeeEEEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCcc
Q 044471 277 ----PNIVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVR 352 (493)
Q Consensus 277 ----~~~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~ 352 (493)
+++.|+|+. +..+|.|.+++|+|+++.+. ......+||||||+++++|++++++|.+++++..... .
T Consensus 84 ~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~-------~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~-g 154 (241)
T 1lya_B 84 KYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTL-------CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQ-G 154 (241)
T ss_dssp GGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEE-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEET-T
T ss_pred HHcCCceEEEECc-cccEEEEEEeEEEECCeeEe-------ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeeccC-C
Confidence 689999998 56899999999999987642 1245679999999999999999999999998765433 3
Q ss_pred ccccCCCCcCccceEEEEecCCcEEEecCcccEEEecccCCeeEEEEEEEec------CCceeechhhhcceEEEEECCC
Q 044471 353 PVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKI------QGQTILGDLVLKDKIFVYDLAG 426 (493)
Q Consensus 353 ~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~------~~~~ILG~~fl~~~yvvfD~~~ 426 (493)
.+.++|.....+|+|+|+| +|.+++|+|++|+++... .+...|.++|++. .+.||||++|||++|+|||+++
T Consensus 155 ~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~-~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~ 232 (241)
T 1lya_B 155 EYMIPCEKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQ-AGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDN 232 (241)
T ss_dssp EEEEEGGGGGGSCCEEEEE-TTEEEEECTTTSEEEETT-TTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEEETTT
T ss_pred cEEEECCCCccCCeEEEEE-CCEEEEECHHHhEEEccC-CCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEEECCC
Confidence 4667887767899999999 889999999999998642 2234555578874 2689999999999999999999
Q ss_pred CEEEEEeCC
Q 044471 427 QRIGWSNYD 435 (493)
Q Consensus 427 ~~igfA~~~ 435 (493)
+|||||+++
T Consensus 233 ~~igfA~~~ 241 (241)
T 1lya_B 233 NRVGFAEAA 241 (241)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEEcC
Confidence 999999864
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.88 E-value=3.9e-23 Score=167.65 Aligned_cols=83 Identities=35% Similarity=0.666 Sum_probs=75.3
Q ss_pred ccceeEEEEEEeCCCCeEEEEEEecCCCeeEEeCCCCC----CCCCCCCCcccCCcCCCCCCCccceeccCCccccCCCC
Q 044471 82 FVVGLYYTKVQLGSPPREFHVQIDTGSDVLWVSCSSCN----GCPGTSGLQIQLNFFDPSSSSTASLVRCSDQRCSLGLN 157 (493)
Q Consensus 82 ~~~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~C~----~C~~~~~~~~~~~~y~p~~SsT~~~v~C~~~~C~~~~~ 157 (493)
+.+.+|+++|.||||||+|.|+|||||+++||+|..|. .|..+ +.|||++|+|++.
T Consensus 10 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~-------~~y~p~~SsT~~~------------- 69 (97)
T 1lya_A 10 YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIH-------HKYNSDKSSTYVK------------- 69 (97)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTS-------CCBCGGGCTTCEE-------------
T ss_pred CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCC-------CCCCchhCCCcee-------------
Confidence 45689999999999999999999999999999999997 58766 8999999999984
Q ss_pred CCCCCCCCCCCCceeEEEcCCCCeEEEEEEEEEEEeee
Q 044471 158 TADSGCSSESNQCSYTFQYGDGSGTSGYYVADFLHLDT 195 (493)
Q Consensus 158 ~~~~~c~~~~~~~~~~~~Yg~Gs~~~G~~~~D~v~~~~ 195 (493)
.+|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 70 ----------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 70 ----------NGTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ----------EEEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ----------CCCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 3478999999999 79999999999974
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.67 E-value=8.4e-17 Score=127.94 Aligned_cols=81 Identities=21% Similarity=0.429 Sum_probs=67.2
Q ss_pred ccccCCCCcCccceEEEEecCCcEEEecCcccEEEecccCCeeEEEEEEEecC-----CceeechhhhcceEEEEECCCC
Q 044471 353 PVLTKGNHTAIFPQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQ-----GQTILGDLVLKDKIFVYDLAGQ 427 (493)
Q Consensus 353 ~~~~~~~~~~~~P~i~f~f~gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~-----~~~ILG~~fl~~~yvvfD~~~~ 427 (493)
.|.++|+....+|+|+|+| ||.+++|+|++|+++... .+...|.++|+..+ +.||||+.|||++|+|||++++
T Consensus 2 ~y~v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~-~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 2 ELQVDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGK-GEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CCEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESC-TTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTT
T ss_pred cEEEECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccC-CCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCC
Confidence 3667887767899999999 899999999999998642 22345556788742 6899999999999999999999
Q ss_pred EEEEEeCC
Q 044471 428 RIGWSNYD 435 (493)
Q Consensus 428 ~igfA~~~ 435 (493)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999863
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.01 E-value=0.19 Score=42.79 Aligned_cols=99 Identities=14% Similarity=0.138 Sum_probs=56.8
Q ss_pred EEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCcccc-ccC---CCC-cCccceEEEEec
Q 044471 298 ISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPV-LTK---GNH-TAIFPQISFNFA 372 (493)
Q Consensus 298 i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~-~~~---~~~-~~~~P~i~f~f~ 372 (493)
+.|||+.+. +++|||.+.+.++++..+.+ +-......... ... ... .......++.+
T Consensus 31 v~InG~~~~-------------~LvDTGAs~s~is~~~a~~l----gl~~~~~~~~~~~a~g~g~~~~~~~~~~~~i~i- 92 (148)
T 2i1a_A 31 IEINNYPVK-------------AFVDTGAQTTIMSTRLAKKT----GLSRMIDKRFIGEARGVGTGKIIGRIHQAQVKI- 92 (148)
T ss_dssp EEETTEEEE-------------EEECTTCSSCEEEHHHHHHH----TGGGGCBCCCC-----------CEEEEEEEEEE-
T ss_pred EEECCEEEE-------------EEEECCCCccccCHHHHHHc----CCCccCCcceEEEEecCCCcccccEEEEEEEEE-
Confidence 678888653 89999999999998766553 22111000000 000 000 11112234555
Q ss_pred CCcEEEecCcccEEEecccCCeeEEEEEEEecCCceeechhhhcceEEEEECCCCEEEEE
Q 044471 373 GGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQGQTILGDLVLKDKIFVYDLAGQRIGWS 432 (493)
Q Consensus 373 gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~~~~ILG~~fl~~~yvvfD~~~~~igfA 432 (493)
|+..+.+ -+.+.+.+...|||..||+++-+..|+.+++|-|.
T Consensus 93 g~~~~~~------------------~~~vl~~~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 93 ETQYIPC------------------SFTVLDTDIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp TTEEEEE------------------EEEEECSSCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CCEEece------------------eEEEecCCCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 4433211 11222212346999999999999999999999996
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.50 E-value=0.19 Score=42.96 Aligned_cols=107 Identities=21% Similarity=0.248 Sum_probs=61.3
Q ss_pred CeeeEEEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHHHHHHHHHHHhhcccCccccccCC--CC--cCcc
Q 044471 289 PHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAAYDPLINAITSSVSQSVRPVLTKG--NH--TAIF 364 (493)
Q Consensus 289 ~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~i~~~i~~~~~~~~~~~~~~~--~~--~~~~ 364 (493)
.++.|+ ..|||+.+. +++|||.+.+.++.+..+.+- +....+.. ....... .. ....
T Consensus 23 ~~l~v~---~~Ing~~v~-------------~LVDTGAs~s~Is~~~A~rlG--L~~~~~~~-~~~~a~g~G~~~~~g~v 83 (148)
T 3s8i_A 23 TMLYIN---CKVNGHPLK-------------AFVDSGAQMTIMSQACAERCN--IMRLVDRR-WAGVAKGVGTQRIIGRV 83 (148)
T ss_dssp CCCEEE---EEETTEEEE-------------EEECTTCSSCEEEHHHHHHTT--CGGGEEGG-GCEECCC---CEEEEEE
T ss_pred CEEEEE---EEECCEEEE-------------EEEeCCCCcEeeCHHHHHHcC--CccccCcc-eeEEEEcCCccEEEEEE
Confidence 345554 447888764 899999999999998766652 11000110 0000000 00 1112
Q ss_pred ceEEEEecCCcEEEecCcccEEEecccCCeeEEEEEEEecC-CceeechhhhcceEEEEECCCCEEEEEe
Q 044471 365 PQISFNFAGGASLILNAQEYLIQQNSVGGTAVWCIGIQKIQ-GQTILGDLVLKDKIFVYDLAGQRIGWSN 433 (493)
Q Consensus 365 P~i~f~f~gg~~~~l~p~~y~~~~~~~~~~~~~cl~i~~~~-~~~ILG~~fl~~~yvvfD~~~~~igfA~ 433 (493)
+...+.+ |+..+ .|-+.+.+.. -..|||..||+++-.+.|++++++-|..
T Consensus 84 ~~~~I~I-g~~~~------------------~~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 84 HLAQIQI-EGDFL------------------QCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp EEEEEEE-TTEEE------------------EEEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred EEEEEEE-CCEEE------------------EEEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 2334444 33321 1223333333 3469999999999999999999998865
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=80.80 E-value=2 Score=33.70 Aligned_cols=27 Identities=19% Similarity=0.275 Sum_probs=23.8
Q ss_pred EEEEEeCCCCeEEEEEEecCCCeeEEeCC
Q 044471 88 YTKVQLGSPPREFHVQIDTGSDVLWVSCS 116 (493)
Q Consensus 88 ~~~i~iGTP~q~~~v~lDTGSs~lWV~~~ 116 (493)
++.|.|| .|.+.+++|||.+++-+...
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 4679999 89999999999999998754
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=79.54 E-value=1.8 Score=34.32 Aligned_cols=26 Identities=27% Similarity=0.355 Sum_probs=23.3
Q ss_pred EEEEEeCCCCeEEEEEEecCCCeeEEeC
Q 044471 88 YTKVQLGSPPREFHVQIDTGSDVLWVSC 115 (493)
Q Consensus 88 ~~~i~iGTP~q~~~v~lDTGSs~lWV~~ 115 (493)
++.|.|| .|.+.+++|||.+++-+..
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 4789999 8999999999999999873
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=75.78 E-value=3.4 Score=32.42 Aligned_cols=27 Identities=22% Similarity=0.217 Sum_probs=23.7
Q ss_pred EEEEEeCCCCeEEEEEEecCCCeeEEeCC
Q 044471 88 YTKVQLGSPPREFHVQIDTGSDVLWVSCS 116 (493)
Q Consensus 88 ~~~i~iGTP~q~~~v~lDTGSs~lWV~~~ 116 (493)
++.|.|| .|.+..++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 4679999 89999999999999988654
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=73.93 E-value=2.5 Score=35.57 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=26.2
Q ss_pred ceeEEEEEEeCCCCeEEEEEEecCCCeeEEeC
Q 044471 84 VGLYYTKVQLGSPPREFHVQIDTGSDVLWVSC 115 (493)
Q Consensus 84 ~~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~ 115 (493)
.+.+++++.|+ .+++++++|||++.+-+..
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 36789999998 7899999999999988764
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=71.28 E-value=3.4 Score=33.11 Aligned_cols=30 Identities=27% Similarity=0.437 Sum_probs=24.6
Q ss_pred EEEEeC---CCCeEEEEEEecCCCeeEEeCCCC
Q 044471 89 TKVQLG---SPPREFHVQIDTGSDVLWVSCSSC 118 (493)
Q Consensus 89 ~~i~iG---TP~q~~~v~lDTGSs~lWV~~~~C 118 (493)
+.|.|| +|+|.+..++|||-+++-+....+
T Consensus 13 vtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 13 IKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred EEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 455555 889999999999999999986543
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=66.43 E-value=5.3 Score=32.27 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=22.1
Q ss_pred EEEEEeCCCCeEEEEEEecCCCeeEEeC
Q 044471 88 YTKVQLGSPPREFHVQIDTGSDVLWVSC 115 (493)
Q Consensus 88 ~~~i~iGTP~q~~~v~lDTGSs~lWV~~ 115 (493)
++ |.|| .|.+..++|||.+++-+.-
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 35 9999 8999999999999998874
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=63.73 E-value=5.7 Score=33.62 Aligned_cols=30 Identities=13% Similarity=0.345 Sum_probs=26.5
Q ss_pred eeEEEEEEeCCCCeEEEEEEecCCCeeEEeCC
Q 044471 85 GLYYTKVQLGSPPREFHVQIDTGSDVLWVSCS 116 (493)
Q Consensus 85 ~~Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~ 116 (493)
..|++++.|. .+++++++|||++..-+...
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 4688999998 89999999999999988754
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=58.56 E-value=9.6 Score=30.60 Aligned_cols=28 Identities=25% Similarity=0.307 Sum_probs=24.3
Q ss_pred EEEEEeCCCCeEEEEEEecCCCeeEEeCCC
Q 044471 88 YTKVQLGSPPREFHVQIDTGSDVLWVSCSS 117 (493)
Q Consensus 88 ~~~i~iGTP~q~~~v~lDTGSs~lWV~~~~ 117 (493)
.+.+.|| .|.+..+||||-+++-+...+
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 4678999 899999999999999997654
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=48.17 E-value=21 Score=29.48 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=24.0
Q ss_pred EEEEEEeCCCCeEEEEEEecCCCeeEEeCC
Q 044471 87 YYTKVQLGSPPREFHVQIDTGSDVLWVSCS 116 (493)
Q Consensus 87 Y~~~i~iGTP~q~~~v~lDTGSs~lWV~~~ 116 (493)
-++.+.|+ .|.+..++|||.+++-+...
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 45779999 89999999999999988654
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=43.07 E-value=24 Score=28.69 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=19.5
Q ss_pred eCCCCeEEEEEEecCCCeeEEeCCC
Q 044471 93 LGSPPREFHVQIDTGSDVLWVSCSS 117 (493)
Q Consensus 93 iGTP~q~~~v~lDTGSs~lWV~~~~ 117 (493)
|| .|.+..++|||-+++-+...+
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 55 688899999999999998654
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=40.92 E-value=23 Score=31.54 Aligned_cols=26 Identities=19% Similarity=0.293 Sum_probs=23.2
Q ss_pred EEEEEeCCCCeEEEEEEecCCCeeEEeC
Q 044471 88 YTKVQLGSPPREFHVQIDTGSDVLWVSC 115 (493)
Q Consensus 88 ~~~i~iGTP~q~~~v~lDTGSs~lWV~~ 115 (493)
.+.|.|| .|.+..++|||.+++-+..
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 5789999 8999999999999998863
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=39.52 E-value=28 Score=26.82 Aligned_cols=16 Identities=19% Similarity=0.420 Sum_probs=14.1
Q ss_pred cEEEeccCcceeccHH
Q 044471 319 GTIVDTGTTLAYLTEA 334 (493)
Q Consensus 319 ~~iiDSGTt~~~lp~~ 334 (493)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 3899999999999964
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=22.20 E-value=94 Score=27.53 Aligned_cols=26 Identities=19% Similarity=0.293 Sum_probs=23.1
Q ss_pred EEEEEeCCCCeEEEEEEecCCCeeEEeC
Q 044471 88 YTKVQLGSPPREFHVQIDTGSDVLWVSC 115 (493)
Q Consensus 88 ~~~i~iGTP~q~~~v~lDTGSs~lWV~~ 115 (493)
.+++.|| .|.+..++|||.+++-+..
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred cEEEEEC--CEEEeeeecccCCceeeec
Confidence 5789999 7999999999999998854
No 53
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=21.65 E-value=86 Score=29.62 Aligned_cols=39 Identities=21% Similarity=0.380 Sum_probs=26.5
Q ss_pred eEEecCCCCCCeeeEEEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHH
Q 044471 279 IVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEA 334 (493)
Q Consensus 279 ~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 334 (493)
+...|+. ....|.+ .|.||.+.+ .++||||++.+++|..
T Consensus 6 v~~~~~~-~~~~Y~~---~i~iG~Q~~-------------~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 6 ATNTPTA-NDEEYIT---PVTIGGTTL-------------NLNFDTGSADLWVFST 44 (323)
T ss_dssp EEEEECG-GGSCEEE---EEEETTEEE-------------EEEEETTCCCEEECBT
T ss_pred eeeeecC-CCCEEEE---EEEECCEEE-------------EEEEeCCCcceEEecC
Confidence 3444553 3445654 467776554 3899999999999974
No 54
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=21.49 E-value=94 Score=29.38 Aligned_cols=40 Identities=23% Similarity=0.270 Sum_probs=26.8
Q ss_pred eEEecCCCCCCeeeEEEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHH
Q 044471 279 IVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAA 335 (493)
Q Consensus 279 ~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~ 335 (493)
+.-.|+. ....|.++ |.||.+.+ .++||||++.+++|..-
T Consensus 5 v~~~~~~-~~~~Y~~~---i~iG~Q~~-------------~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 5 AVTTPQN-NDEEYLTP---VTVGKSTL-------------HLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEECT-TTSCEEEE---EEEBTEEE-------------EEEEETTCCCEEEECTT
T ss_pred EEeEEcC-CCCEEEEE---EEECCEEE-------------EEEEeCCCccceEeeCC
Confidence 3344543 34556544 66776554 38999999999999753
No 55
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=21.24 E-value=71 Score=30.43 Aligned_cols=15 Identities=33% Similarity=0.594 Sum_probs=13.6
Q ss_pred cEEEeccCcceeccH
Q 044471 319 GTIVDTGTTLAYLTE 333 (493)
Q Consensus 319 ~~iiDSGTt~~~lp~ 333 (493)
.++||||++.+++|.
T Consensus 28 ~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 28 SLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEETTCCCCEECS
T ss_pred EEEEeCCChhheecC
Confidence 489999999999985
No 56
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=20.75 E-value=71 Score=30.37 Aligned_cols=36 Identities=28% Similarity=0.492 Sum_probs=24.3
Q ss_pred ecCCCCCCeeeEEEeEEEEcC--EEeecCCCcccccCCCcEEEeccCcceeccH
Q 044471 282 SPLVPSQPHYNLNLQSISVNG--QTLSIDPSAFSTSSNKGTIVDTGTTLAYLTE 333 (493)
Q Consensus 282 ~pl~~~~~~y~v~l~~i~v~~--~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~ 333 (493)
+|+......|.++ |.||. +.+ .++||||++.+++|.
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~Q~~-------------~v~~DTGSs~~Wv~~ 42 (339)
T 3fv3_A 5 LSLINEGPSYASK---VSVGSNKQQQ-------------TVIIDTGSSDFWVVD 42 (339)
T ss_dssp EEEEECSSSEEEE---EEETTTTEEE-------------EEEEETTCCCEEEEE
T ss_pred eEEEcCCCEEEEE---EEEcCCCcEE-------------EEEEeCCCCceEEec
Confidence 4554444556554 66763 333 489999999999985
No 57
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=20.63 E-value=95 Score=29.34 Aligned_cols=40 Identities=23% Similarity=0.385 Sum_probs=26.6
Q ss_pred eEEecCCCCCCeeeEEEeEEEEcCEEeecCCCcccccCCCcEEEeccCcceeccHHH
Q 044471 279 IVYSPLVPSQPHYNLNLQSISVNGQTLSIDPSAFSTSSNKGTIVDTGTTLAYLTEAA 335 (493)
Q Consensus 279 ~~~~pl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~ 335 (493)
+...|+. ....|.+ .|.||.+.+ .++||||++.+++|..-
T Consensus 6 v~~~~~~-~~~~Y~~---~i~iG~q~~-------------~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 6 VTTNPTS-NDEEYIT---QVTVGDDTL-------------GLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEECG-GGCCEEE---EEEETTEEE-------------EEEEETTCCCEEECBTT
T ss_pred eeeeEcC-CCCEEEE---EEEECCEEE-------------EEEEcCCCcceEEecCC
Confidence 3344553 3445554 467775554 38999999999999753
No 58
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=20.62 E-value=44 Score=20.99 Aligned_cols=8 Identities=0% Similarity=-0.371 Sum_probs=3.3
Q ss_pred CCcccccc
Q 044471 464 SRRNVPQK 471 (493)
Q Consensus 464 ~~~~~~~~ 471 (493)
+.+...+.
T Consensus 7 ~ls~GaIA 14 (38)
T 2k1k_A 7 GLTGGEIV 14 (38)
T ss_dssp TCCHHHHH
T ss_pred CCCCCcee
Confidence 33444444
No 59
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=20.28 E-value=74 Score=30.26 Aligned_cols=15 Identities=20% Similarity=0.563 Sum_probs=13.5
Q ss_pred cEEEeccCcceeccH
Q 044471 319 GTIVDTGTTLAYLTE 333 (493)
Q Consensus 319 ~~iiDSGTt~~~lp~ 333 (493)
.++||||++.+++|.
T Consensus 28 ~v~~DTGSs~~Wv~~ 42 (334)
T 1j71_A 28 TVVIDTGSSDLWVVD 42 (334)
T ss_dssp EEEEETTCCCEEEEE
T ss_pred EEEEcCCCCCEEEec
Confidence 489999999999985
Done!