Citrus Sinensis ID: 044476

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
Protein Sequence
MAATTTTETMISRAKPPRTTKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFVKAGGGGGVLDMPAWAAKEPRTIEFWTDVAERGRRVLARCGSRGRWWRAGCENTHVGLECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRTGRGSVERHVRLLSLVLLRAGWSKEDVVYSLNLQDHGSFNGLDSKEGKSNKSQHPRKCSKEGDDDHQKSSVKQLGHVHALPLAVLR
Secondary Structure (PSIPRED)
cccccccccccccccccccccEEEEEHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccHHHHHHHcccccccccccccccHHHHHHHHccccccccHHcccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEcccEEEEcccHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccEccccccccccccccccccEEEcHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHccccccHHHHHHHHHcccccccccccccccHHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccEEEEcccEEcccccccccccEEEEEcccEEEEcHcHHHHHHHHccccccccccccccccccccccccEEEEHHHHHHccccEEccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccHHHccccccccccccccccccHHHHHHHccccccccHHHHHHHHHcccHHEcc
Coil and Loop (DISEMBL)
maattttetmisrakpprttklVCFSYAAYAKNLIDHLkslnipilpglndaefsdiestfnftfppdlRSILreglpagpafpnwrsssHQQLRILVklpvlslsknvslnnfwsvswgqrpqnnNDALSLIKKLLdkapllvpiyrncyvpstpnmagnpvfyidtEEVRVLSFDLAGFFKQVDEFVkagggggvldmpawaakeprtieFWTDVAERGRRVLARCgsrgrwwragcenthvgLECCMDEVFWRlrdggwreEEVREMMMVVdchddptsevqlvgdrtgrgsVERHVRLLSLVLLRAGWSKEDVVYSLnlqdhgsfngldskegksnksqhprkcskegdddhqkssvkqlghvhalplavlr
Flexible Loop (DISEMBL)
maattttetmisrakpprttkLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWsvswgqrpqNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFVKAGGGGGVLDMPAWAAKEPRTIEFWTDVAERGRRVLarcgsrgrwwragCENTHVGLECCMDEVFWRLRDGGWREEEVREMMMVVdchddptsevqlvgdrtgrgsverHVRLLSLVLLRAGWSKEDVVYSLNLQDHGSfngldskegksnksqhprkcskegdddhqkssvkqlghvhalplavlr
Low Complexity Region (SEG)
MAATTTTETMISRAKPPRTTKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFVKAGGGGGVLDMPAWAAKEPRTIEFWTDVAERGRRVLARCGSRGRWWRAGCENTHVGLECCMDEVFWRLRDGGWreeevremmmvvDCHDDPTSEVQLVGDRTGRGSverhvrllslvllrAGWSKEDVVYSLNLQDHGSFNGLDSKEGKSNKSQHPRKCSKEGDDDHQKSSVKQLGHVHALPLAVLR
Disordered region (IsUnstruct)
*******************TKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEF**************WAAKEPRTIEFWTDVAERGRRVLARCGSRGRWWRAGCENTHVGLECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRTGRGSVERHVRLLSLVLLRAGWSKEDVVYSLNLQD***************************************************
Disordered Region (DISOPRED)
************************FSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVD*********************PRTIEFWTD*****************************LECCMDEVFWRLRDGGWREEEVREMMM*****************RTGRGSVERHVRLLSLVLLRAGWSKEDVVYSLNLQDHGS***********************************LGHVHALPLAVLR
Disordered Region (DISEMBL)
**************KPPRTTKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFVKAGGGGGVLDMPAWAAKEPRTIEFWTDVAERGRRVLARCGSRGRWWRAGCENTHVGLECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRTGRGSVERHVRLLSLVLLRAGWSKEDVVYSLNLQDHGSFNGLDS******************************GHVHALPLAVLR
Disordered Region (DISPRO)
*******************TKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFVK***************KEPRTIEFWTDVAERGRRVLAR****GRW*****ENTHVGLECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRTGRGSVERHVRLLSLVLLRAGWSKEDVVYSLNLQDHGSFNGLDSKEGKSNKSQHPRKCSKEGDDDHQKSSVKQLGHVHALPLAVLR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAATTTTETMISRAKPPRTTKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFVKAGGGGGVLDMPAWAAKEPRTIEFWTDVAERGRRVLARCGSRGRWWRAGCENTHVGLECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRTGRGSVERHVRLLSLVLLRAGWSKEDVVYSLNLQDHGSFNGLDSKEGKSNKSQHPRKCSKEGDDDHQKSSVKQLGHVHALPLAVLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	376
224095001	348	predicted protein [Populus trichocarpa]	0.882	0.954	0.564	1e-100
255582413	374	conserved hypothetical protein [Ricinus	0.904	0.909	0.547	3e-95
449451563	365	PREDICTED: uncharacterized protein LOC10	0.816	0.841	0.525	2e-90
449499893	259	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.603	0.876	0.572	5e-69
357482459	314	hypothetical protein MTR_5g014810 [Medic	0.787	0.942	0.447	3e-62
297821503	321	hypothetical protein ARALYDRAFT_900728 [	0.797	0.934	0.401	4e-52
168035032	372	predicted protein [Physcomitrella patens	0.789	0.798	0.369	1e-51
168063785	395	predicted protein [Physcomitrella patens	0.787	0.749	0.346	6e-51
168005714	382	predicted protein [Physcomitrella patens	0.680	0.670	0.355	3e-46
357482915	395	hypothetical protein MTR_5g017410 [Medic	0.848	0.807	0.325	1e-45

>gi|224095001|ref|XP_002310322.1| predicted protein [Populus trichocarpa] gi|222853225|gb|EEE90772.1| predicted protein [Populus trichocarpa]

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/370 (56%), Positives = 260/370 (70%), Gaps = 38/370 (10%)

Query: 14  AKPPRTTKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSIL 73
           A   + T LVCFS+AAYAK L+DHLKSLNIPILPGL D+EF+ IESTF+FTFPPDLRSIL
Sbjct: 2   AATKKNTVLVCFSFAAYAKTLLDHLKSLNIPILPGLTDSEFTSIESTFHFTFPPDLRSIL 61

Query: 74  REGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLI 133
           +EGLP GP FPNWRSSS QQL+IL+ LP L+L KN+SLNNFW  SWG RPQ+ N AL   
Sbjct: 62  QEGLPIGPHFPNWRSSSLQQLQILLNLPSLNLCKNISLNNFWVDSWGHRPQDTNKALDFA 121

Query: 134 KKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFVKAG- 192
           K+ LDKAP+LVPIYRNCY+PS+PN++GNPVF++D E+V VLSFD+  FF+QVD F++ G 
Sbjct: 122 KQFLDKAPVLVPIYRNCYIPSSPNVSGNPVFHVDDEQVCVLSFDVTRFFQQVD-FLQVGF 180

Query: 193 ------GGGGVLDMPAWAAKEPRTIEFWTDVAERGRRVLARCGSRGRWWR-AGCENTHVG 245
                      +++PAWAA E R IEFWT+VAERGRRV+AR G+  RWW+  G  + H  
Sbjct: 181 PIRSSRNENVSMNVPAWAATEARKIEFWTEVAERGRRVVAR-GNTPRWWKDVGGGSDHFE 239

Query: 246 LECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRTGRGSVER-----HV 300
           L  C++EVFWRLRDGGWREEEVREMM   D        ++  G   G    ++     H 
Sbjct: 240 LRECLEEVFWRLRDGGWREEEVREMMNGCD------QGIRENGGGCGTTKFDKEDVFWHG 293

Query: 301 RLLSLVLLRAGWSKEDVVYSLNLQDHGSFNGLDSKEGKSNKSQHPRKCSKEGDDDHQKSS 360
           R+ S+VLLRAG S EDVV+ L+L++                 Q P  CS+E DDDH+K+S
Sbjct: 294 RMWSIVLLRAGRSMEDVVHLLDLEE----------------LQPPNSCSRE-DDDHKKNS 336

Query: 361 VKQLGHVHAL 370
           +KQL  + +L
Sbjct: 337 IKQLMKLRSL 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582413|ref|XP_002531995.1| conserved hypothetical protein [Ricinus communis] gi|223528354|gb|EEF30394.1| conserved hypothetical protein [Ricinus communis]

 Score =  355 bits (910), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 203/371 (54%), Positives = 253/371 (68%), Gaps = 31/371 (8%)

Query: 21  KLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAG 80
           KL CFS+AAYAK LID+L+SLNIPILPGL D EF+ IES F+F+FPPDLRSIL+EGLP G
Sbjct: 12  KLACFSFAAYAKTLIDNLRSLNIPILPGLTDQEFTSIESNFHFSFPPDLRSILQEGLPVG 71

Query: 81  PAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDKA 140
           P FPNWRSSS QQL++L+ LP L+LSKN++ NNFW  SWG RP ++   L+  K+L  KA
Sbjct: 72  PLFPNWRSSSPQQLQLLLNLPFLNLSKNITHNNFWVDSWGYRPDDSQQMLATSKRLFTKA 131

Query: 141 PLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFVKAGGG------ 194
           P+LVPIY NCY+PS+PN AGNPVFY+D   VRVL+FDLA FF++  E  K G G      
Sbjct: 132 PVLVPIYGNCYIPSSPNTAGNPVFYVDDCSVRVLNFDLARFFQEA-ELFKTGTGRVNNFN 190

Query: 195 ----------GGVLDMPAWAAKEPRTIEFWTDVAERGRRVLARCGSRGRWWRAGCENTHV 244
                        ++ PAWAA + R +EFWT+VAERGR+V+AR  + G WW  G      
Sbjct: 191 WRRNYHHSYNKVSINAPAWAATKARKVEFWTEVAERGRKVVARADTLG-WWNGGEYLEDS 249

Query: 245 GLECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGD----RTGRGSVERHV 300
            L  C+++VFW+LRDGGWREE+VREMMM+  C +   +     GD    + G+  V  HV
Sbjct: 250 SLGDCLEDVFWKLRDGGWREEDVREMMMIDGCDEKRENGCGGDGDGGRVQNGKLDVVWHV 309

Query: 301 RLLSLVLLRAGWSKEDVVYSLNLQD-HGSFNGLDSKEGKSNKSQHPRKCSKEGDDDHQKS 359
           R+LS+VLLRAGWS+EDVVYSL+LQD   S   LD           P     E D+DHQKS
Sbjct: 310 RVLSVVLLRAGWSREDVVYSLDLQDLEDSKCCLDFPP--------PNTSCAEQDEDHQKS 361

Query: 360 SVKQLGHVHAL 370
           S+KQL H+ +L
Sbjct: 362 SIKQLMHLQSL 372

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451563|ref|XP_004143531.1| PREDICTED: uncharacterized protein LOC101204059 [Cucumis sativus]

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/331 (52%), Positives = 225/331 (67%), Gaps = 24/331 (7%)

Query: 1   MAATTTTETMISRAKPPRTTKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIEST 60
           MA  T T        PPR  KL CFS+AAYAK +IDHLKSL IP+ PGL+D EF+ +EST
Sbjct: 1   MATATVT------VNPPRP-KLACFSFAAYAKTVIDHLKSLQIPVHPGLSDPEFTSVEST 53

Query: 61  FNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWG 120
           F F+FPPDLRSIL+EGLP G  FPNWRSSS QQL IL+ LP   L K +S   FW  SWG
Sbjct: 54  FRFSFPPDLRSILQEGLPIGSGFPNWRSSSTQQLHILINLPKFCLLKEISQRKFWCQSWG 113

Query: 121 QRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAG 180
            +P + NDA++L K+ LD+AP+LVPIY+N Y+PS PNMAGNPVF++D  E+RV SFDLAG
Sbjct: 114 AQPDDTNDAVALAKQFLDRAPVLVPIYKNWYIPSAPNMAGNPVFHLDDGEIRVSSFDLAG 173

Query: 181 FFKQVDEFVKAGGGGG---VLDMPAWAAKEPRTIEFWTDVAERGRRVLARCGSRGRWWRA 237
           FF Q  E+ + G       V+D PAWAA E R +EFWT+VA R ++   R  + G WW  
Sbjct: 174 FF-QTHEYSQLGKAETDRLVIDSPAWAATEARAVEFWTEVASR-KKATGREVTEG-WWNE 230

Query: 238 GCENTHVGLECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRTGRGSVE 297
           G     +GL+ C+++VFW+LR+GGWREE+VR+MMM +D HD    +           ++E
Sbjct: 231 G--EFEMGLDGCLEDVFWKLREGGWREEDVRDMMM-MDRHDRSLEQ--------NEATME 279

Query: 298 RHVRLLSLVLLRAGWSKEDVVYSLNLQDHGS 328
           +    +  +LL  GWS++DVVYSL+L+ H +
Sbjct: 280 KLRVSVCEILLSGGWSRDDVVYSLDLEGHSA 310

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449499893|ref|XP_004160946.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101229907 [Cucumis sativus]

 Score =  267 bits (683), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 138/241 (57%), Positives = 168/241 (69%), Gaps = 14/241 (5%)

Query: 1   MAATTTTETMISRAKPPRTTKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIEST 60
           MA  T T        PPR  KL CFS+AAYAK +IDHLKSL IP+ PGL+D EF+ +EST
Sbjct: 1   MATATVT------VNPPRP-KLACFSFAAYAKTVIDHLKSLQIPVHPGLSDPEFTSVEST 53

Query: 61  FNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWG 120
           F F+FPPDLRSIL+EGLP G  FPNWRSSS QQL IL+ LP   L K +S   FW  SWG
Sbjct: 54  FRFSFPPDLRSILQEGLPIGSGFPNWRSSSTQQLHILINLPNC-LLKEISQRKFWCQSWG 112

Query: 121 QRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAG 180
            +P + NDA++L K+ LD+AP+LVPIY+N Y+PS PNMAGNPVF++D  E+RV SFDLAG
Sbjct: 113 AQPDDTNDAVALAKQFLDRAPVLVPIYKNWYIPSAPNMAGNPVFHLDDGEIRVSSFDLAG 172

Query: 181 FFKQVDEFVKAGGGGG---VLDMPAWAAKEPRTIEFWTDVAERGRRVLARCGSRGRWWRA 237
           FF Q  E+ + G       V+D PAWAA E R +EFWT+VA R ++   R  + G WW  
Sbjct: 173 FF-QTHEYSQLGKAETDRLVIDSPAWAATEARAVEFWTEVASR-KKATGREVTEG-WWNE 229

Query: 238 G 238
           G
Sbjct: 230 G 230

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357482459|ref|XP_003611516.1| hypothetical protein MTR_5g014810 [Medicago truncatula] gi|355512851|gb|AES94474.1| hypothetical protein MTR_5g014810 [Medicago truncatula]

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 153/342 (44%), Positives = 210/342 (61%), Gaps = 46/342 (13%)

Query: 6   TTETMIS--------RAKPPRTTK--LVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFS 55
           TT T I+        + KPP   K   +CFS+  YA +LI +LKS NI I  GL ++EF 
Sbjct: 2   TTTTFITNKETKNDEKTKPPLRPKKRRICFSFTTYANDLIQNLKSSNIIIEQGLTESEFQ 61

Query: 56  DIESTFNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFW 115
            +ES FN  FPPDL +IL++GLP  P FPNWRSSSHQQL+IL+ +PV S+ + V  N+FW
Sbjct: 62  HLESKFNLKFPPDLHAILQQGLPVSPGFPNWRSSSHQQLQILLNIPVSSILRRVKNNSFW 121

Query: 116 SVSWGQRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYID-TEEVRVL 174
             SWG  P+   D L+  +++LD AP LVPI+R+CY+P  P + GNPVFY+D + +VR++
Sbjct: 122 HPSWGPIPK---DKLTAAQRILDPAPQLVPIFRHCYIPMNPFVTGNPVFYVDHSGDVRLV 178

Query: 175 SFDLAGFFKQVDEFVKAGGGGGV--LDMPAWAAKEPRTIEFWTDVAERGRRVLARCGSRG 232
            +D+ GFF+        G   GV  +D P WAA+E R IE WT+VA+ GR      G RG
Sbjct: 179 GYDIVGFFRD------GGFLDGVEEVDDPVWAAREARRIEVWTEVAD-GR------GERG 225

Query: 233 -RWWRAGCENTHVGLECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRT 291
            +WW    ++    +  CMD V  RLR+GGW+EEE++EMMM+ +  +             
Sbjct: 226 WKWW---WDDRRGVVGRCMDGVLRRLREGGWKEEEIQEMMMMNEDEEGEKKH-------- 274

Query: 292 GRGSVERHVRLLSLVLLRAGWSKEDVVYSLNLQDHGSFNGLD 333
                E+HV +L L LLRAGWS+ED+VYSL +    S+  L+
Sbjct: 275 -----EKHVSVLGLELLRAGWSREDIVYSLGVDVGNSWLDLE 311

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821503|ref|XP_002878634.1| hypothetical protein ARALYDRAFT_900728 [Arabidopsis lyrata subsp. lyrata] gi|297324473|gb|EFH54893.1| hypothetical protein ARALYDRAFT_900728 [Arabidopsis lyrata subsp. lyrata]

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/369 (40%), Positives = 196/369 (53%), Gaps = 69/369 (18%)

Query: 1   MAATTTTETMISRAKPPRTTKLVCFSYAAYAKNLIDHLKS-LNIPILPGLNDAEFSDIES 59
           +   TT     S  KPP            Y K +I+HLKS   I + PGL + E S +ES
Sbjct: 12  LGHITTDPIRSSSVKPPS---------PVYYKTIINHLKSQTGIHVSPGLTNQEISAVES 62

Query: 60  TFNFTFPPDLRSILREGLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSW 119
           +  F+FP DLRSIL+ GLP G  FP WR+ S+   R  + LP+L+LS+ V  N FW  SW
Sbjct: 63  SLGFSFPLDLRSILQTGLPVGTNFPIWRTGSN---RNHLLLPLLNLSQIVVRNGFWVDSW 119

Query: 120 GQRPQNNNDALSLIKKLLDKAPLLVPIYRNCYVPS-TPNMAGNPVFYIDTEEVRVLSFDL 178
           G RP N+++AL L+KKL++ AP+LVP++ + YVPS TPN+AGNPVF ID + VR LS D+
Sbjct: 120 GIRPGNDSEALLLVKKLIEIAPVLVPVFGDFYVPSTTPNLAGNPVFQIDGDGVRELSCDV 179

Query: 179 AGFFKQVDEFVKAGGGGGVLDMPAWAAKEPRTIEFWTDVAERGRRVLARCGSRGRWWRAG 238
           AGF K          G G  ++     +  R +EFW+DVAERGR V+AR  +R  W   G
Sbjct: 180 AGFLK----------GLGRSEVQTEDRRRRRRVEFWSDVAERGRFVVARDTTRDWWSALG 229

Query: 239 CENTHVGLECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRTGRGSVER 298
            E    GL  C+D+ FW+LR+GGW E+EVR+MMM+     D     Q    R        
Sbjct: 230 LE----GLRECLDDAFWKLREGGWTEDEVRDMMMMDGVDRDTWCTKQQTQSR-------- 277

Query: 299 HVRLLSLVLLRAGWSKEDVVYSLNLQDHGSFNGLDSKEGKSNKSQHPRKCSKEGDDDHQK 358
                            DVVY        +F G    EG  +       C++E  +DHQK
Sbjct: 278 -----------------DVVY--------AFGGEGMDEGDED------TCTEE--EDHQK 304

Query: 359 SSVKQLGHV 367
             V  L H+
Sbjct: 305 REVTTLRHL 313

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168035032|ref|XP_001770015.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678736|gb|EDQ65191.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/330 (36%), Positives = 180/330 (54%), Gaps = 33/330 (10%)

Query: 20  TKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPA 79
           T+ V FS++AYA+++IDHLK   +PI  GL+D EF  IE+T+ FTFPPDL+ IL+EGLP 
Sbjct: 42  TRRVFFSFSAYARSVIDHLKKCEVPIAEGLSDEEFEKIEATYGFTFPPDLKGILQEGLPT 101

Query: 80  GPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDK 139
           G  FPNWR+ + QQLR+ + LP+L L   V+ + FW   WG RP   + A+ + +  L K
Sbjct: 102 GSGFPNWRTGNVQQLRMRINLPILRLLHEVAHSRFWWKPWGPRPLEIDHAVRIARSALRK 161

Query: 140 APLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFK-------------QVD 186
           APLLVP++ +CY+ S PN AGNPVF +    V    +D+A FF+             ++D
Sbjct: 162 APLLVPMHGHCYISSAPNDAGNPVFLVYQNNVVYCGYDVADFFEREAFRAHDGEPPFELD 221

Query: 187 EFVKAGGGGGVLD----------MPAWAAKEPRTIEFWTDVAERGRR----VLARCGSRG 232
           E+  +      L           +P WAA+ PR IEFW+++ ++ ++     L  C +  
Sbjct: 222 EWQGSMTSEKSLPPKALINLSMAIPPWAARSPRRIEFWSELVDKYQKQRNDSLKECRTLP 281

Query: 233 RWWRAGCENTHVGLECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRTG 292
                  E++   L    +E+   LR GGW E ++ +MM   D    P    Q +     
Sbjct: 282 P--TPNLESSK-WLTGYFEEMSLVLRQGGWEENDISDMM---DPKASPEFWNQQLDAEAV 335

Query: 293 RGSVERHVRLLSLVLLRAGWSKEDVVYSLN 322
             ++ R V LLS  L +AGWS  DV  ++ 
Sbjct: 336 LVTLAREVELLSTSLKKAGWSVPDVTETMK 365

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168063785|ref|XP_001783849.1| predicted protein [Physcomitrella patens subsp. patens] gi|162664627|gb|EDQ51339.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 194/358 (54%), Gaps = 62/358 (17%)

Query: 17  PRTTKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREG 76
           P  T+ V FS++AYA++++D LK   +PI  GL+D EF  IE+T+  TFPPDL+ IL EG
Sbjct: 43  PPGTRRVFFSFSAYARSVLDKLKKCKVPIAEGLSDEEFERIEATYGITFPPDLKGILHEG 102

Query: 77  LPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKL 136
           LP G  FPNWR+ +   L + + LPV+ L + V+ ++FW  +WG RP++ N A+ + +  
Sbjct: 103 LPVGAGFPNWRAGNRDHLSMRINLPVVGLLREVANSSFWWKAWGPRPKDINQAVRIARSA 162

Query: 137 LDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFV--KAGGG 194
           + K+P+LVP+Y +CY+PS+PN+AGNPVF++  +      +D+A FF + + F+  K   G
Sbjct: 163 IRKSPILVPMYGHCYIPSSPNLAGNPVFFVYQKNAVYCGYDVADFFNR-EAFLSHKFEFG 221

Query: 195 GGVLDMPAWA----------------------AKEPRTIEFWTDVAER-GRRVLARCGSR 231
             + DM ++                       A+ PR IEFW+D+A++  +++ +R    
Sbjct: 222 DLMYDMGSFRNEKSIEGGALEHANRDVDFEPDARTPRRIEFWSDLADKVHKQIFSRVEGF 281

Query: 232 GRWWRAG-------CENTHVGLE------------CCMDEVFWRLRDGGWREEEVREMMM 272
               R          ++T+  LE              +DE+   LR GGWRE+++ +M++
Sbjct: 282 SSPRRQDFNLLKPRTDSTNENLEEQDGIKPSKWLNVYLDEISLVLRQGGWREDDINDMIV 341

Query: 273 VV-------DCHDDPTSEVQLVGDRTGRGSVERHVRLLSLVLLRAGWSKEDVVYSLNL 323
                      HD   SE  LV       S+ R V LLS  L RAGWS  DV  ++ +
Sbjct: 342 SESPSKRWNQQHD---SEAVLV-------SLAREVELLSTSLKRAGWSVPDVTETMKM 389

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168005714|ref|XP_001755555.1| predicted protein [Physcomitrella patens subsp. patens] gi|162693262|gb|EDQ79615.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 157/295 (53%), Gaps = 39/295 (13%)

Query: 17  PRTTKLVCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREG 76
           P  T+ V FS++AYA+N++D LKS  +PI  GL+D EF  IE+TF  TFPPDL+ IL E 
Sbjct: 43  PPGTRRVFFSFSAYARNVVDKLKSCKVPISEGLSDEEFDKIEATFGITFPPDLKGILHEA 102

Query: 77  LPAGPAFPNWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKL 136
           LP G  FPNWR+ S   L + + LP++ L + V+ ++FW  +WG RP +   A+ + +  
Sbjct: 103 LPVGAGFPNWRAGSRDHLSMRINLPIVGLLREVANSSFWWKAWGPRPTDTKLAVRVARTA 162

Query: 137 LDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVD---------- 186
           L ++P+LVPIY +CY+PS+P +AGNPVF+   + V    +D+A FF + D          
Sbjct: 163 LRRSPILVPIYGHCYIPSSPGLAGNPVFFAYQKNVVFCGYDVADFFDREDFESSDDITKY 222

Query: 187 -EFVKAGGGGGVL---DMPAWAAKEPRTIEFWTDVAERGRRVLARCG------------- 229
              V+      +L    M    A+  R IEFW+D+AE+  +  A  G             
Sbjct: 223 PHIVEKSLPSEILINVSMVQRDARTSRHIEFWSDLAEKVHKQFAVHGESFFSPEKIVSDS 282

Query: 230 ------------SRGRWWRAGCENTHVGLECCMDEVFWRLRDGGWREEEVREMMM 272
                        R R        +   L   +DE+   LR GGWRE+++ +M++
Sbjct: 283 SKRSSSPVKKHPERDRMEEKNEAQSLRWLNGYLDEISLVLRQGGWREDDINDMIV 337

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357482915|ref|XP_003611744.1| hypothetical protein MTR_5g017410 [Medicago truncatula] gi|355513079|gb|AES94702.1| hypothetical protein MTR_5g017410 [Medicago truncatula]

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 185/350 (52%), Gaps = 31/350 (8%)

Query: 25  FSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAGPAFP 84
           FS+++    +I  L +  + + PGL+DAEF+  E+ F+F FPPDLR+IL  G+P GP FP
Sbjct: 42  FSFSSVVDKVITQLHNSGVQVQPGLSDAEFARAEAEFSFVFPPDLRAILAAGIPVGPGFP 101

Query: 85  NWRSSSHQ-QLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDKAPLL 143
           +WRS++ + +LR  + LP+ ++S  ++ N FWS SWG RP     AL + +  L KAPLL
Sbjct: 102 DWRSTAARLRLRASLDLPIAAISFQIARNAFWSKSWGLRPSEPEKALKIARNALKKAPLL 161

Query: 144 VPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFVKAGGGGGVL----- 198
           +PI+ +CY+PS P++AGNP+FY+D   +    FDL+ FF++   F ++     +L     
Sbjct: 162 IPIFNHCYIPSNPSLAGNPIFYVDENRIFCCGFDLSDFFQRESLFRRSESDPKILMKQRS 221

Query: 199 -------DMPAWA-------AKEPRTIEFWTDVAERGRR---VLARCGSRGRWWRAGCEN 241
                     A++        + PR +EFWT+ A   RR   + +   S  R++     +
Sbjct: 222 VSEKSAGSSTAFSRRSLDTGGRTPRWVEFWTEAATDRRRRNSLSSESTSPERFFDIPPRS 281

Query: 242 THVG-LECCMDEVFWRLRDGGWREEEVREMMMVVDCHDDPTSEVQLVGDRTGRGSVERHV 300
              G ++  +D++   L+ GGW E ++ EM+ V  C      E+ ++ ++    ++    
Sbjct: 282 VIPGWVDEYIDKIGSVLKAGGWSEPDITEMVQVSACGFF-EGEMVMLDNQALLDALLLKA 340

Query: 301 RLLSLVLLRAGWSKEDVVYSLNLQDHGSFNGLDSKEGKSNKSQHPRKCSK 350
              S  L +AGWS E+V  +L       F+    KE K  K   P    K
Sbjct: 341 DRFSDSLRKAGWSSEEVSEALG------FDFRPEKERKPVKKLSPELVEK 384

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	376
TAIR|locus:2062245	325	AT2G22790 "AT2G22790" [Arabido	0.590	0.683	0.475	3.3e-53
TAIR|locus:2158128	394	AT5G67020 "AT5G67020" [Arabido	0.470	0.449	0.422	1.5e-43
TAIR|locus:2074870	403	AT3G50340 "AT3G50340" [Arabido	0.470	0.439	0.411	6.6e-41

TAIR|locus:2062245 AT2G22790 "AT2G22790" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
 Identities = 114/240 (47%), Positives = 152/240 (63%)

Query:    26 SYAAYAKNLIDHLKS-LNIPILPGLNDAEFSDIESTFNFTFPPDLRSILREGLPAGPAFP 84
             S   Y K +++H KS     + PGL + E S +ES+  F+FP DLRSIL+ GLP G  FP
Sbjct:    28 SSPVYYKTIVNHFKSQTGNHVSPGLTNQEISAVESSHGFSFPLDLRSILQTGLPVGTNFP 87

Query:    85 NWRSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNNDALSLIKKLLDKAPLLV 144
             NWR+ S++   +L  LP+L+LS++V  N FW  SWG RP N+ +ALSL+KKL++ AP+LV
Sbjct:    88 NWRTGSNRN-NLL--LPLLNLSQHVVRNGFWVDSWGIRPGNDAEALSLVKKLIEIAPVLV 144

Query:   145 PIYRNCYVPST-PNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEFVKAGGGGGVLDMPAW 203
             P+Y + YVPST PN+AGNPVF ID + VR LS D+ GF K +       G          
Sbjct:   145 PVYGDFYVPSTTPNLAGNPVFQIDGDGVRELSCDVVGFLKGI-------GRSETPTEDRR 197

Query:   204 AAKEPRTIEFWTDVAERGRRVLARCGSRGRWWRA-GCENTHVGLECCMDEVFWRLRDGGW 262
               + PR +EFW+DVAE  R V+AR  +R  WW A G E    GL  C+D+ FW+LR+ GW
Sbjct:   198 RRRRPRRVEFWSDVAEGWRFVVARDYTRD-WWSALGFE----GLTACLDDAFWKLREAGW 252

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2158128 AT5G67020 "AT5G67020" [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
 Identities = 76/180 (42%), Positives = 113/180 (62%)

Query:    12 SRAKPPRTTKL--VCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDL 69
             +RA  P T  +     S++ +A  +I+HLK+  I I PGL+D EF+ +E+ F FTFPPDL
Sbjct:    24 ARAAAPSTPTIRNSLQSFSPFADKVINHLKNSGIKIQPGLSDTEFARVEAEFGFTFPPDL 83

Query:    70 RSILREGLPAGPAFPNWRS-SSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNND 128
             R IL  GL  G  FP+WRS  +   LR ++ LPV ++S  ++ N+ W  SWG +P +   
Sbjct:    84 RVILSAGLSVGAGFPDWRSPGARLHLRAMIDLPVAAVSFQIAKNSLWCKSWGLKPPDPEK 143

Query:   129 ALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEF 188
             AL + +  L +APLL+PI+ +CY+P  P++AGNPVF+ID   +     DL+ FF++   F
Sbjct:   144 ALRVARNALKRAPLLIPIFDHCYIPCNPSLAGNPVFFIDETRIFCCGSDLSEFFERESAF 203

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2074870 AT3G50340 "AT3G50340" [Arabidopsis thaliana (taxid:3702)]

 Score = 397 (144.8 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
 Identities = 74/180 (41%), Positives = 111/180 (61%)

Query:    12 SRAKPPRTTKL--VCFSYAAYAKNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDL 69
             +RA  P T  +     S+++ A  +I HL +  I + PGL D+EF+  E+ F F FPPDL
Sbjct:    24 ARAAAPTTPTVRNSLVSFSSLADQVISHLHTSRIQVQPGLTDSEFARAEAEFAFAFPPDL 83

Query:    70 RSILREGLPAGPAFPNWRS-SSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRPQNNND 128
             R++L  GLP G  FP+WRS  +   LR ++ LP+ ++S  ++ N  WS SWG RP +   
Sbjct:    84 RAVLTAGLPVGAGFPDWRSPGARLHLRAMIDLPIAAVSFQIARNTLWSKSWGLRPSDPEK 143

Query:   129 ALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYIDTEEVRVLSFDLAGFFKQVDEF 188
             AL + +  L +APL++PI+ +CY+P  P++AGNPVFYID   +     DL+ FF++   F
Sbjct:   144 ALRVARNALKRAPLMIPIFDHCYIPCNPSLAGNPVFYIDETRIFCCGSDLSDFFERESVF 203

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_VII001242 hypothetical protein (348 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	376
PF09346	130	SMI1_KNR4: SMI1 / KNR4 family (SUKH-1); InterPro:	96.94
smart00860	129	SMI1_KNR4 SMI1 / KNR4 family. Proteins in this fam	96.84
PF14567	132	SUKH_5: SMI1-KNR4 cell-wall; PDB: 2PAG_A.	96.17
PF14568	120	SUKH_6: SMI1-KNR4 cell-wall; PDB: 2PRV_A.	95.47
COG4282	191	SMI1 Protein involved in beta-1,3-glucan synthesis	91.48

>PF09346 SMI1_KNR4: SMI1 / KNR4 family (SUKH-1); InterPro: IPR018958 Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation [, ]

Probab=96.94  E-value=0.00058  Score=54.74  Aligned_cols=28  Identities=21%  Similarity=0.533  Sum_probs=20.9

Q ss_pred             CCCHHHHHHHHHHcCccCCchHHHHHHh
Q 044476           48 GLNDAEFSDIESTFNFTFPPDLRSILRE   75 (376)
Q Consensus        48 GLSd~Ef~~IEa~fgF~FPpDlRa~L~~   75 (376)
                      ++|++||+.+|+++|++||+++|.||+.
T Consensus         1 p~t~~~I~~~E~~lg~~LP~~yk~fl~~   28 (130)
T PF09346_consen    1 PATEEEIQELEEKLGVRLPDDYKEFLKE   28 (130)
T ss_dssp             ---HHHHHHHHHHHTS---HHHHHHHH-
T ss_pred             CCCHHHHHHHHHHhCCCCcHHHHHHHHh
Confidence            5899999999999999999999999995

Yeast members of this family are involved in the regulation of cell wall assembly. Saccharomyces cerevisiae (Baker's yeast) protein KNR4 (SMI1) has a regulatory role in chitin deposition and in cell wall assembly []. It was originally identified as a regulator of chitin synthase expression (acting as a repressor) [] and of 1,3-beta-glucan synthase levels []. It was shown to localise in patches at presumptive bud sites in unbudded cells and at the incipient bud site during bud emergence []. KNR4 is believed to connect the PKC1-SLT2 MAPK pathway with cell proliferation. It has been shown to interact with BCK2, a gene involved in cell cycle progression in S. cerevisiae (forming a complex) to allow PKC1 to coordinate the cell cycle (cell proliferation) with cell wall integrity [, ]. PKC1 plays an essential role in cell wall integrity and cell proliferation through a bifurcated PKC1/mitogen-activated protein (MAP) kinase pathway. KNR4 also interacts with the tyrosine-tRNA synthetase protein encoded by TYS1 and is involved in sporulation process []. Note: previously reported evidence that KNR4 may interact with nuclear matrix-association region [] may be due to an artefact [].; PDB: 3D5P_A 2ICG_A.

>smart00860 SMI1_KNR4 SMI1 / KNR4 family

Probab=96.84  E-value=0.0011  Score=51.36  Aligned_cols=29  Identities=17%  Similarity=0.399  Sum_probs=27.3

Q ss_pred             CCCHHHHHHHHHHcCccCCchHHHHHHhc
Q 044476           48 GLNDAEFSDIESTFNFTFPPDLRSILREG   76 (376)
Q Consensus        48 GLSd~Ef~~IEa~fgF~FPpDlRa~L~~G   76 (376)
                      |.|++||.++|+.+|++||+|+|.||+.-
T Consensus         1 ~~s~~~i~~~e~~lg~~LP~~y~~f~~~~   29 (129)
T smart00860        1 PASEEEIAELEKKLGIKLPEDYKEFLLLH   29 (129)
T ss_pred             CCCHHHHHHHHHHHCCCCCHHHHHHHHHc
Confidence            57999999999999999999999999984

Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation.

>PF14567 SUKH_5: SMI1-KNR4 cell-wall; PDB: 2PAG_A

Probab=96.17  E-value=0.0046  Score=54.93  Aligned_cols=45  Identities=24%  Similarity=0.561  Sum_probs=30.5

Q ss_pred             HHHHHHHHhCC--cccCCC-CCHHHHHHHHHHcCccCCchHHHHHHhc
Q 044476           32 KNLIDHLKSLN--IPILPG-LNDAEFSDIESTFNFTFPPDLRSILREG   76 (376)
Q Consensus        32 ~~ii~~L~~~G--v~i~pG-LSd~Ef~~IEa~fgF~FPpDlRa~L~~G   76 (376)
                      ..||+.|++.+  ++..-+ =|+++|..+|+..||.||+|+|+||...
T Consensus         2 ~~~i~~L~~~~e~~~~~l~lpd~e~I~~~Ee~L~i~lP~eyk~fL~~~   49 (132)
T PF14567_consen    2 EDIIERLKELNEPVPVPLELPDDEQIVEAEEQLGISLPEEYKEFLLEA   49 (132)
T ss_dssp             HHHHHHHHHH----SS------HHHHHHHHHHHT----HHHHHHHHHH
T ss_pred             hHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHC
Confidence            46899999954  555434 5899999999999999999999999986

>PF14568 SUKH_6: SMI1-KNR4 cell-wall; PDB: 2PRV_A

Probab=95.47  E-value=0.01  Score=47.96  Aligned_cols=25  Identities=24%  Similarity=0.585  Sum_probs=20.4

Q ss_pred             HHHHHHHHHHcCccCCchHHHHHHh
Q 044476           51 DAEFSDIESTFNFTFPPDLRSILRE   75 (376)
Q Consensus        51 d~Ef~~IEa~fgF~FPpDlRa~L~~   75 (376)
                      |++|..+|+++|++||.|+|.||..
T Consensus         1 ee~I~~~E~~Lg~~lP~~Yk~fL~~   25 (120)
T PF14568_consen    1 EEEIEEAEKKLGVKLPEDYKEFLKE   25 (120)
T ss_dssp             -HHHHHHHHHHTS---HHHHHHHHH
T ss_pred             ChHHHHHHHHhCCCCCHHHHHHHHH
Confidence            6899999999999999999999997

>COG4282 SMI1 Protein involved in beta-1,3-glucan synthesis [Carbohydrate transport and metabolism]

Probab=91.48  E-value=0.2  Score=46.97  Aligned_cols=36  Identities=28%  Similarity=0.401  Sum_probs=33.0

Q ss_pred             hCCcccCCCCCHHHHHHHHHHcCccCCchHHHHHHh
Q 044476           40 SLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILRE   75 (376)
Q Consensus        40 ~~Gv~i~pGLSd~Ef~~IEa~fgF~FPpDlRa~L~~   75 (376)
                      .+-..+.||-|-..|+++|+.||.+||||.|+.|+.
T Consensus        24 dl~~~l~pgat~~di~~aE~dlg~tlPpdvResl~i   59 (191)
T COG4282          24 DLLPFLRPGATCGDIQRAEADLGRTLPPDVRESLAI   59 (191)
T ss_pred             ccccccCCCccHHHHHHHHHHhcCcCChHHHHHHHh
Confidence            344789999999999999999999999999999987

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	376
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 45/317 (14%), Positives = 90/317 (28%), Gaps = 93/317 (29%)

Query: 69  LRSILREGLPAGPAFPNW-----RSSSHQQLRILVKLPVLSLSKNVSLNNFWSVSWGQRP 123
             S   +       F  W      +S    L +L KL +  +  N +  +  S +     
Sbjct: 171 CLSYKVQCKMDFKIF--WLNLKNCNSPETVLEMLQKL-LYQIDPNWTSRSDHSSNI---K 224

Query: 124 QNNNDALSLIKKLLDKAPLLVPIYRNCYVPSTPNMAGNPVFYI--DTEEVRVL-SFDLA- 179
              +   + +++LL   P     Y NC +             +  + +  +   +F+L+ 
Sbjct: 225 LRIHSIQAELRRLLKSKP-----YENCLL-------------VLLNVQNAKAWNAFNLSC 266

Query: 180 -----GFFKQVDEFVKAGGGGGV-LDMPAWAAKEPRTIEF---WTDV--------AERGR 222
                  FKQV +F+ A     + LD  +              + D              
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326

Query: 223 -RVLARCGSR-----GRW--WR-AGCENTHVGLECCMD--------EVFWRL---RDGG- 261
            R L+            W  W+   C+     +E  ++        ++F RL        
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386

Query: 262 ---------WREEEVREMMMVVD-CHD------DPTSE------VQLVGDRTGRGSVERH 299
                    W +    ++M+VV+  H        P         + L            H
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446

Query: 300 VRLLSLVLLRAGWSKED 316
             ++    +   +  +D
Sbjct: 447 RSIVDHYNIPKTFDSDD 463

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	376
2pag_A	135	Hypothetical protein; nysgx, target 10412I, novel	97.25
2icg_A	160	LIN2918 protein; hypothetical protein, structural	96.99
2prv_A	153	Uncharacterized protein YOBK; structural genomics,	96.76
3d5p_A	144	Putative glucan synthesis regulator of SMI1/KNR4;	96.35

>2pag_A Hypothetical protein; nysgx, target 10412I, novel fold, structural genomics, PSI-2 structure initiative; 1.60A {Pseudomonas syringae PV} SCOP: d.369.1.1

Probab=97.25  E-value=0.00032  Score=59.98  Aligned_cols=43  Identities=16%  Similarity=0.350  Sum_probs=36.4

Q ss_pred             HHHHHHHh--CC--cccCCCCCHHHHHHHHHHcCccCCchHHHHHHhc
Q 044476           33 NLIDHLKS--LN--IPILPGLNDAEFSDIESTFNFTFPPDLRSILREG   76 (376)
Q Consensus        33 ~ii~~L~~--~G--v~i~pGLSd~Ef~~IEa~fgF~FPpDlRa~L~~G   76 (376)
                      .||+.|++  ..  +.+.+- |+++|..+|+.+|++||+|+|.||..+
T Consensus         3 ~~ie~L~~~~~~~~~~~~~~-t~e~I~~~E~~Lgi~fP~dYk~fl~~~   49 (135)
T 2pag_A            3 EVIEQLREANEPVPVPLELP-DEDQLVEIEEQLFINIPFVFKEFLLTV   49 (135)
T ss_dssp             HHHHHHHHHCCCCSSCCCCC-CHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHCCCCCHHHHHHHHHC
Confidence            67888888  33  444444 999999999999999999999999997

>2icg_A LIN2918 protein; hypothetical protein, structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 1.65A {Listeria innocua} SCOP: d.369.1.1

Probab=96.99  E-value=0.0011  Score=56.72  Aligned_cols=46  Identities=7%  Similarity=0.058  Sum_probs=40.0

Q ss_pred             hHHHHHHHHHhCC--cccCCCCCHHHHHHHHHHcCccCCchHHHHHHh
Q 044476           30 YAKNLIDHLKSLN--IPILPGLNDAEFSDIESTFNFTFPPDLRSILRE   75 (376)
Q Consensus        30 ya~~ii~~L~~~G--v~i~pGLSd~Ef~~IEa~fgF~FPpDlRa~L~~   75 (376)
                      +-.+|.+.+.+..  +...+++|+++|..+|+.+|++||.|+|.||..
T Consensus         6 ~~~~i~~~i~~~~~~~~~~~~~s~~~I~~~E~~Lgi~lP~~Yk~fL~~   53 (160)
T 2icg_A            6 FLEEVDRLITLSGITFHASGTGTPELIKIYQDALGNEFPETYKLFLEK   53 (160)
T ss_dssp             HHHHHHHHHHHCCSCCBCCCCCCHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccccccCCCCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            4556777776665  677889999999999999999999999999998

>2prv_A Uncharacterized protein YOBK; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacillus subtilis} SCOP: d.369.1.1

Probab=96.76  E-value=0.0014  Score=55.98  Aligned_cols=43  Identities=19%  Similarity=0.322  Sum_probs=36.4

Q ss_pred             HHHHHHHHhCCcccCCCCCHHHHHHHHHHcCccCCchHHHHHHh
Q 044476           32 KNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILRE   75 (376)
Q Consensus        32 ~~ii~~L~~~Gv~i~pGLSd~Ef~~IEa~fgF~FPpDlRa~L~~   75 (376)
                      +++|+.+++.+ ...++.|+++|..+|+.+|++||.|+|.||..
T Consensus         8 ~~li~~~~~~~-~~~~~~see~I~~~E~~Lgi~lP~dYk~fLk~   50 (153)
T 2prv_A            8 ENFINENKQNA-IFTEGASHENIGRIEENLQCDLPNSYKWFLEK   50 (153)
T ss_dssp             HHHHHHHGGGC-EECCCCCHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred             HHHHHHhhhhc-ccCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence            45666666654 45679999999999999999999999999997

>3d5p_A Putative glucan synthesis regulator of SMI1/KNR4; STR genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Bacteroides fragilis nctc 9343}

Probab=96.35  E-value=0.0023  Score=54.31  Aligned_cols=33  Identities=27%  Similarity=0.312  Sum_probs=31.2

Q ss_pred             cccCCCCCHHHHHHHHHHcCccCCchHHHHHHh
Q 044476           43 IPILPGLNDAEFSDIESTFNFTFPPDLRSILRE   75 (376)
Q Consensus        43 v~i~pGLSd~Ef~~IEa~fgF~FPpDlRa~L~~   75 (376)
                      ....+++|++||..+|+.+|++||.|+|.||..
T Consensus         9 ~~~~~~~s~~~I~~~E~~lgi~lP~~Yk~fl~~   41 (144)
T 3d5p_A            9 WYKKDGASSASIDDVEKLLNTTLPKQYKSFLLW   41 (144)
T ss_dssp             EEECCCCCHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred             cccCCCCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            367899999999999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	376
d2prva1	152	Uncharacterized protein YobK {Bacillus subtilis [T	97.97
d2icga1	158	Uncharacterized protein Lin2918 {Listeria innocua	97.38
d2paga1	135	Hypothetical protein PSPTO5518 {Pseudomonas syring	96.88

>d2prva1 d.369.1.1 (A:1-152) Uncharacterized protein YobK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: SMI1/KNR4-like
superfamily: SMI1/KNR4-like
family: SMI1/KNR4-like
domain: Uncharacterized protein YobK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.97  E-value=1.7e-05  Score=65.05  Aligned_cols=119  Identities=18%  Similarity=0.181  Sum_probs=71.8

Q ss_pred             HHHHHHHHhCCcccCCCCCHHHHHHHHHHcCccCCchHHHHHHh---cCCCCCCCCCCCCCCHHHHHHHHhhccccchhh
Q 044476           32 KNLIDHLKSLNIPILPGLNDAEFSDIESTFNFTFPPDLRSILRE---GLPAGPAFPNWRSSSHQQLRILVKLPVLSLSKN  108 (376)
Q Consensus        32 ~~ii~~L~~~Gv~i~pGLSd~Ef~~IEa~fgF~FPpDlRa~L~~---GLPvG~gFPdWR~~s~~~Lr~~L~~P~~gil~d  108 (376)
                      +++|+..+. +..+.+|.|+++|+++|+.+|++||+++|.||..   |...+..+..+.......+..            
T Consensus         7 ~~~i~~~~~-~~~~~~gas~e~I~~~E~~Lg~~LP~~Yk~fL~~~ng~~~~~~~~~~~~~~~~~~i~~------------   73 (152)
T d2prva1           7 ENFINENKQ-NAIFTEGASHENIGRIEENLQCDLPNSYKWFLEKYGAGGLFGVLVLGYNFDHASVVNR------------   73 (152)
T ss_dssp             HHHHHHHGG-GCEECCCCCHHHHHHHHHHHTSCCCHHHHHHHHHHCSEEETTEEECCCCSSSCHHHHH------------
T ss_pred             HHHHHHccc-ccccCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHcCCccccCceEeeccccchHHHHh------------
Confidence            345555555 3457899999999999999999999999999997   222222222222222221111            


Q ss_pred             ccccCCcccccCCCCCChhHHHHHHHHhhccCCceecccCC-----ccccCCCCCCCCceEEEeC--CCEEEEccchHHH
Q 044476          109 VSLNNFWSVSWGQRPQNNNDALSLIKKLLDKAPLLVPIYRN-----CYVPSTPNMAGNPVFYIDT--EEVRVLSFDLAGF  181 (376)
Q Consensus       109 Ve~n~fW~~sWG~RP~~~~eal~~Ar~~L~~aP~LVPIygH-----rYlPs~p~~aGnPVfSV~q--tDIi~yG~DLady  181 (376)
                                           ....++...-...+||++.+     |+..+.....-.||+.-+.  ..+..+..++.+|
T Consensus        74 ---------------------~~~~~~~~~~p~~~i~~~~~gg~~~~~d~~~~~~~~~~V~~~~~~~~~~~~iA~SF~ef  132 (152)
T d2prva1          74 ---------------------TNEYKEHYGLTDGLVVIEDVDYFAYCLDTNKMKDGECPVVEWDRVIGYQDTVADSFIEF  132 (152)
T ss_dssp             ---------------------HHHHHHHSCCCTTEEEEEECSSEEEEEETTSCBTTBCCEEEEETTTEEEEEEESSHHHH
T ss_pred             ---------------------hHHHHHhccCCCceEEEEcCCCCEEEEEeccCCCCCCCeEEEecCCCeEEEhhcCHHHH
Confidence                                 11122222234567787653     4444432222246766533  4678889999999


Q ss_pred             Hhh
Q 044476          182 FKQ  184 (376)
Q Consensus       182 f~r  184 (376)
                      |.+
T Consensus       133 L~~  135 (152)
T d2prva1         133 FYN  135 (152)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            975

>d2icga1 d.369.1.1 (A:1-158) Uncharacterized protein Lin2918 {Listeria innocua [TaxId: 1642]}

class: Alpha and beta proteins (a+b)
fold: SMI1/KNR4-like
superfamily: SMI1/KNR4-like
family: SMI1/KNR4-like
domain: Uncharacterized protein Lin2918
species: Listeria innocua [TaxId: 1642]

Probab=97.38  E-value=0.00012  Score=60.32  Aligned_cols=47  Identities=6%  Similarity=0.065  Sum_probs=41.6

Q ss_pred             hhHHHHHHHHHhCC--cccCCCCCHHHHHHHHHHcCccCCchHHHHHHh
Q 044476           29 AYAKNLIDHLKSLN--IPILPGLNDAEFSDIESTFNFTFPPDLRSILRE   75 (376)
Q Consensus        29 ~ya~~ii~~L~~~G--v~i~pGLSd~Ef~~IEa~fgF~FPpDlRa~L~~   75 (376)
                      +...+|-+.+...+  ....++-|+++|+++|+.+|++||+++|.||..
T Consensus         4 ~~~e~~~~~~~~~~~~~~~~~~at~E~I~~~E~~LG~~lP~~Yr~fL~~   52 (158)
T d2icga1           4 SFLEEVDRLITLSGITFHASGTGTPELIKIYQDALGNEFPETYKLFLEK   52 (158)
T ss_dssp             HHHHHHHHHHHHCCSCCBCCCCCCHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCccccCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence            45667888888888  456788999999999999999999999999998

>d2paga1 d.369.1.1 (A:1-135) Hypothetical protein PSPTO5518 {Pseudomonas syringae pv. tomato [TaxId: 323]}

class: Alpha and beta proteins (a+b)
fold: SMI1/KNR4-like
superfamily: SMI1/KNR4-like
family: SMI1/KNR4-like
domain: Hypothetical protein PSPTO5518
species: Pseudomonas syringae pv. tomato [TaxId: 323]

Probab=96.88  E-value=0.00046  Score=57.59  Aligned_cols=45  Identities=20%  Similarity=0.431  Sum_probs=36.5

Q ss_pred             HHHHHHHHhCC--cccCCCC-CHHHHHHHHHHcCccCCchHHHHHHhc
Q 044476           32 KNLIDHLKSLN--IPILPGL-NDAEFSDIESTFNFTFPPDLRSILREG   76 (376)
Q Consensus        32 ~~ii~~L~~~G--v~i~pGL-Sd~Ef~~IEa~fgF~FPpDlRa~L~~G   76 (376)
                      ..||+.|++..  +++...+ |+++|..+|+.+|++||+|+|.||...
T Consensus         2 ~eiie~L~~~~~~~p~~~e~pt~e~I~~~E~~lg~~~P~~yk~fl~~~   49 (135)
T d2paga1           2 EEVIEQLREANEPVPVPLELPDEDQLVEIEEQLFINIPFVFKEFLLTV   49 (135)
T ss_dssp             HHHHHHHHHHCCCCSSCCCCCCHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             hHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHh
Confidence            35777777663  4444444 999999999999999999999999985