Query 044478
Match_columns 232
No_of_seqs 159 out of 732
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 05:45:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044478.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044478hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g4d_A (+)-delta-cadinene synt 100.0 3.6E-71 1.2E-75 536.4 19.0 204 19-232 18-221 (554)
2 3m00_A Aristolochene synthase; 100.0 5.2E-71 1.8E-75 534.9 18.5 205 18-232 12-217 (550)
3 2ong_A 4S-limonene synthase; m 100.0 4.9E-70 1.7E-74 527.4 18.9 205 23-232 2-210 (543)
4 3n0f_A Isoprene synthase; terp 100.0 8.5E-70 2.9E-74 527.0 16.1 203 22-232 14-219 (555)
5 2j5c_A 1,8-cineole synthase; t 100.0 8.8E-70 3E-74 528.3 13.8 204 19-232 31-237 (569)
6 1n1b_A (+)-bornyl diphosphate 100.0 5.3E-69 1.8E-73 521.0 16.4 206 22-232 5-216 (549)
7 3p5p_A Taxadiene synthase; cla 100.0 3.7E-52 1.3E-56 415.7 13.8 161 69-232 243-412 (764)
8 3sdr_A Alpha-bisabolene syntha 100.0 5.7E-52 1.9E-56 416.8 14.2 161 69-232 295-469 (817)
9 3s9v_A Abietadiene synthase, c 100.0 6.5E-52 2.2E-56 414.9 13.7 162 69-232 267-441 (785)
10 3pya_A ENT-copalyl diphosphate 100.0 9.7E-51 3.3E-55 403.3 14.5 179 51-232 220-415 (727)
11 3sdr_A Alpha-bisabolene syntha 98.0 2.3E-06 7.8E-11 86.5 2.4 49 18-66 20-68 (817)
12 1pd3_A Nonstructural protein N 61.3 5.3 0.00018 27.2 2.4 33 52-86 16-48 (58)
13 3s9v_A Abietadiene synthase, c 55.4 6.2 0.00021 39.7 2.9 40 27-66 5-45 (785)
14 2kng_A Protein LSR2; DNA-bindi 51.4 9 0.00031 26.1 2.3 28 131-175 22-49 (55)
15 1c07_A Protein (epidermal grow 30.9 1.3E+02 0.0045 20.7 7.1 30 70-103 24-53 (95)
16 1fi6_A EH domain protein REPS1 29.9 1.2E+02 0.0041 20.8 5.6 69 59-139 9-82 (92)
17 1qjt_A EH1, epidermal growth f 28.4 1.6E+02 0.0053 20.8 6.3 64 71-145 26-89 (99)
18 1b0n_B Protein (SINI protein); 23.3 69 0.0024 21.7 3.1 26 75-103 14-39 (57)
19 3qqa_A CMER; alpha-helical, he 21.7 99 0.0034 23.4 4.2 34 138-171 51-84 (216)
No 1
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=3.6e-71 Score=536.42 Aligned_cols=204 Identities=46% Similarity=0.851 Sum_probs=180.9
Q ss_pred hhccccCCCCCCCCccccccccCCCCccchhHHHHHHHHHHHHHHHHHhccCCccchhhhhHHHHHHhCcccccHHHHHH
Q 044478 19 KESTRRSANFDPTIWGDYFLSYTGDFKESGDASVKHQELKKEIRTMLRADINKPSQTKLDLIDDIQRLGVSYHFESEIDE 98 (232)
Q Consensus 19 ~~~~R~~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~~LkeeVr~ml~~~~~d~~~~~L~lID~lqRLGI~yhFe~EI~~ 98 (232)
....||+||||||+|||+||++ +.....+.+.+++++||+|||+||.+...|++ ++|+|||+||||||+|||++||++
T Consensus 18 ~~~~R~~~~~~ps~W~~~fl~~-~~~~~~~~~~~~~e~Lk~eVr~~l~~~~~~~~-~~l~lID~lqrLGi~~hF~~EI~~ 95 (554)
T 3g4d_A 18 KDEMRPKADFQPSIWGDLFLNC-PDKNIDAETEKRHQQLKEEVRKMIVAPMANST-QKLAFIDSVQRLGVSYHFTKEIED 95 (554)
T ss_dssp -------CCCCCCTTTTTTTSC-CC---CHHHHHHHHHHHHHHHHHHHSCCSSHH-HHHHHHHHHHHTTCGGGCHHHHHH
T ss_pred CCCCCCCCCCCccccccccccC-CCchhhHHHHHHHHHHHHHHHHHHHhcccCHH-HHHHHHHHHHHcCchhhhHHHHHH
Confidence 3446999999999999999998 43323347899999999999999975346899 999999999999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCcccchhhHHHHHHHHhhcccccccccccccccccccccccchhhcHHHHHHHHHHhhcCCCC
Q 044478 99 ILQKMHEANQDCDLGDDENVQELYYISLQFRLLRQNGYKISAADVFNSFKDSNGNFKSFLKRDIRGMLSLYEAAHLRVHG 178 (232)
Q Consensus 99 ~L~~i~~~~~~~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~~DvF~~Fkd~~G~Fk~~l~~Dv~glLsLYeAS~L~~~g 178 (232)
+|++||+. . . ..+. |||+|||+|||||||||+|| ||||++|+|++|+|++++.+||+|||+|||||||+++|
T Consensus 96 ~L~~i~~~-~-~--~~~~---dl~~~al~FRlLR~hGy~VS-~dvf~~F~~~~g~F~~~l~~d~~glL~LYeAs~l~~~g 167 (554)
T 3g4d_A 96 ELENIYHN-N-N--DAEN---DLYTTSIRFRLLREHGYNVS-CDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHG 167 (554)
T ss_dssp HHHHHHHS-C-C--CTTC---CHHHHHHHHHHHHHTTCCCC-GGGGGGGBCTTSSBCHHHHHCHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHhc-c-C--CCCC---CHHHHHHHHHHHHhcCCCCC-hhHHhhhcccCCCcccccccchHHHHHHHHHHhCCCCC
Confidence 99999986 2 1 1224 99999999999999999999 99999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHcCCCCCCCCChhHHhhcccCC
Q 044478 179 ENILNEALTFTVTHLESFTSQSNTQLAAQVNRALNRPIRKSLPRLEAKHYMPIY 232 (232)
Q Consensus 179 E~iLdeA~~Ft~~~L~~~~~~~~~~l~~~V~~aL~~P~h~~l~RleaR~yI~~Y 232 (232)
|+|||+|+.||+++|++.++.++++|+++|+|||++|+||++|||||||||++|
T Consensus 168 E~iLdeA~~fs~~~L~~~~~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y 221 (554)
T 3g4d_A 168 EDILDEAISFTTHHLSLAVASLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVY 221 (554)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTCCTTHHHHHHHHHHCCTTTSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHhCCCccCCchHHHHHHHHHHh
Confidence 999999999999999998887888999999999999999999999999999987
No 2
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=5.2e-71 Score=534.91 Aligned_cols=205 Identities=43% Similarity=0.755 Sum_probs=187.1
Q ss_pred hhhccccCCCCCCCCccccccccCCCCccchhHHHHHHHHHHHHHHHHHhccCCccchhhhhHHHHHHhCcccccHHHHH
Q 044478 18 EKESTRRSANFDPTIWGDYFLSYTGDFKESGDASVKHQELKKEIRTMLRADINKPSQTKLDLIDDIQRLGVSYHFESEID 97 (232)
Q Consensus 18 ~~~~~R~~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~~LkeeVr~ml~~~~~d~~~~~L~lID~lqRLGI~yhFe~EI~ 97 (232)
.....||+||||||+|||+||++.+.....+.+.+++++||+|||+||.+...+++ ++|+|||+||||||+|||++||+
T Consensus 12 ~~~~~R~~~~~~ps~W~d~fl~~~~~~~~~~~~~~~~e~Lk~eVr~~l~~~~~~~~-~~L~lID~lqrLGi~~hF~~EI~ 90 (550)
T 3m00_A 12 EEEIVRPVADFSPSLWGDQFLSFSIKNQVAEKYAKEIEALKEQTRNMLLATGMKLA-DTLNLIDTIERLGISYHFEKEID 90 (550)
T ss_dssp ----CCCCCCCCCCTTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHTCSSCCHH-HHHHHHHHHHHTTCGGGCHHHHH
T ss_pred ccccCCCCCCCCcccccccccccCCcchhhHHHHHHHHHHHHHHHHHHHhcccCHH-HHHHHHHHHHHcCchhhhHHHHH
Confidence 44456999999999999999997654333347899999999999999964346899 99999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCcccchhhHHHHHHHHhhcccccccccccccccccccccccchhhcHHHHHHHHHHhhcCCC
Q 044478 98 EILQKMHEANQDCDLGDDENVQELYYISLQFRLLRQNGYKISAADVFNSFKDSNGNFKSFLKRDIRGMLSLYEAAHLRVH 177 (232)
Q Consensus 98 ~~L~~i~~~~~~~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~~DvF~~Fkd~~G~Fk~~l~~Dv~glLsLYeAS~L~~~ 177 (232)
++|++||+.|. .+. |||+|||+|||||||||+|| ||||++|+|++|+|++++.+||+|||+|||||||+++
T Consensus 91 ~~L~~i~~~~~-----~~~---dl~~~al~FRLLR~hGy~VS-~dvf~~F~~~~G~F~~~l~~d~~glL~LYeAs~l~~~ 161 (550)
T 3m00_A 91 DILDQIYNQNS-----NCN---DLCTSALQFRLLRQHGFNIS-PEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTH 161 (550)
T ss_dssp HHHHHHHHHCC-----CCS---SHHHHHHHHHHHHHTTCCCC-GGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHhcc-----cCC---CHHHHHHHHHHHHhcCCCCC-hHHhhhccccCCCccccchhchHHHHHHHHHHhcCCC
Confidence 99999999876 234 99999999999999999999 9999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHcCCCCCCCCChhHHhhccc-CC
Q 044478 178 GENILNEALTFTVTHLESFTSQSNTQLAAQVNRALNRPIRKSLPRLEAKHYMP-IY 232 (232)
Q Consensus 178 gE~iLdeA~~Ft~~~L~~~~~~~~~~l~~~V~~aL~~P~h~~l~RleaR~yI~-~Y 232 (232)
||+|||+|+.||+++|++.+++++++|+++|+|||++|+||++|||||||||+ +|
T Consensus 162 gE~iLdeA~~fs~~~L~~~~~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~~Y 217 (550)
T 3m00_A 162 ADDILEDALAFSTIHLESAAPHLKSPLREQVTHALEQCLHKGVPRVETRFFISSIY 217 (550)
T ss_dssp TCGGGTTHHHHHHHHHHHHGGGCCTTHHHHHHHHHHSCSTTSCHHHHHHHHHHHTG
T ss_pred CcHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHhCCCccCCchHHHHHHHHHHHh
Confidence 99999999999999999988878889999999999999999999999999999 77
No 3
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=4.9e-70 Score=527.43 Aligned_cols=205 Identities=33% Similarity=0.570 Sum_probs=185.7
Q ss_pred ccCCCCCCCCccccccccCCCCccchhHHHHHHHHHHHHHHHHHhccCCccchhhhhHHHHHHhCcccccHHHHHHHHHH
Q 044478 23 RRSANFDPTIWGDYFLSYTGDFKESGDASVKHQELKKEIRTMLRADINKPSQTKLDLIDDIQRLGVSYHFESEIDEILQK 102 (232)
Q Consensus 23 R~~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~~LkeeVr~ml~~~~~d~~~~~L~lID~lqRLGI~yhFe~EI~~~L~~ 102 (232)
||++||+||+|||+||++.+.....+.+.+++++||++||+|+.+ ..|++ ++|+|||+||||||+|||++||+++|++
T Consensus 2 r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~Lk~~V~~~~~~-~~d~~-~~l~liD~lqrLGi~~hF~~EI~~~L~~ 79 (543)
T 2ong_A 2 RRSGNYNPSRWDVNFIQSLLSDYKEDKHVIRASELVTLVKMELEK-ETDQI-RQLELIDDLQRMGLSDHFQNEFKEILSS 79 (543)
T ss_dssp CCCCCCCCCSSCHHHHHHCCCSSCSTHHHHHHHHHHHHHHHHHHH-CCCHH-HHHHHHHHHHHTTGGGTTHHHHHHHHHH
T ss_pred CCCCCCCCCcCCcccccCCCchhhhhHHHHHHHHHHHHHHHHHhc-ccCHH-HHHHHHHHHHhCCchhhhHHHHHHHHHH
Confidence 899999999999999986433222237899999999999999987 45899 9999999999999999999999999999
Q ss_pred HHhhccCC--CCCCCCcccchhhHHHHHHHHhhcccccccccccccccccccccccchhhcHHHHHHHHHHhhcCCCCch
Q 044478 103 MHEANQDC--DLGDDENVQELYYISLQFRLLRQNGYKISAADVFNSFKDSNGNFKSFLKRDIRGMLSLYEAAHLRVHGEN 180 (232)
Q Consensus 103 i~~~~~~~--~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~~DvF~~Fkd~~G~Fk~~l~~Dv~glLsLYeAS~L~~~gE~ 180 (232)
||+.|..+ |+.. . ..|||+|||+|||||||||+|| ||||++|||++|+|++++.+||+|||+|||||||+++||+
T Consensus 80 i~~~~~~~~~~~~~-~-~~dl~~~al~FRlLR~hGy~vs-~dvf~~Fk~~~g~F~~~l~~d~~glL~Ly~As~l~~~gE~ 156 (543)
T 2ong_A 80 IYLDHHYYKNPFPK-E-ERDLYSTSLAFRLLREHGFQVA-QEVFDSFKNEEGEFKESLSDDTRGLLQLYEASFLLTEGET 156 (543)
T ss_dssp HHHTTTCCCSSCCC-C-CCCHHHHHHHHHHHHHTTCCCC-GGGGGGGBCTTSSBCTTGGGCHHHHHHHHHHHTTCCSSCH
T ss_pred HHHhhccccccccc-c-cCCHHHHHHHHHHHHHcCCCcc-HHHHhcccCCCCCccchhhhccHHHHHHHHHHHcCCCChH
Confidence 99977531 1111 1 3499999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhc-C-ChhHHHHHHHHcCCCCCCCCChhHHhhcccCC
Q 044478 181 ILNEALTFTVTHLESFTSQ-S-NTQLAAQVNRALNRPIRKSLPRLEAKHYMPIY 232 (232)
Q Consensus 181 iLdeA~~Ft~~~L~~~~~~-~-~~~l~~~V~~aL~~P~h~~l~RleaR~yI~~Y 232 (232)
|||||+.||++||++.+.+ + +++|+++|+|||++|+||+|||||||+||++|
T Consensus 157 iL~eA~~Ft~~~L~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y 210 (543)
T 2ong_A 157 TLESAREFATKFLEEKVNEGGVDGDLLTRIAYSLDIPLHWRIKRPNAPVWIEWY 210 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHSCTTTSCSTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHhhhHhccchHHHHHHHHHHh
Confidence 9999999999999999886 5 88999999999999999999999999999987
No 4
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=8.5e-70 Score=526.98 Aligned_cols=203 Identities=39% Similarity=0.628 Sum_probs=179.3
Q ss_pred cccCCCCCCCCccccccccCCCCccchhHHHHHHHHHHHHHHHHHhccC-CccchhhhhHHHHHHhCcccccHHHHHHHH
Q 044478 22 TRRSANFDPTIWGDYFLSYTGDFKESGDASVKHQELKKEIRTMLRADIN-KPSQTKLDLIDDIQRLGVSYHFESEIDEIL 100 (232)
Q Consensus 22 ~R~~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~~LkeeVr~ml~~~~~-d~~~~~L~lID~lqRLGI~yhFe~EI~~~L 100 (232)
.|++|||+||+|||+||++.+.....+.+.+++++||+|||+||.+ .. +++ ++|+|||+||||||+|||++||+++|
T Consensus 14 ~~~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~e~Lk~eVr~~l~~-~~~~~~-~~L~lID~lqRLGi~~hF~~EI~~~L 91 (555)
T 3n0f_A 14 ARRSADYEPNSWDYDFLLSSDTDESIEVYKDKAKKLEAEVRREINN-EKAEFL-TLLELIDNVQRLGLGYRFESDIRRAL 91 (555)
T ss_dssp ---CCCCCCCTTCHHHHTCC-----CHHHHHHHHHHHHHHHHHHHC-TTSCHH-HHHHHHHHHHHTTCGGGSHHHHHHHH
T ss_pred cCCCCCCCcccccccccccCCcchhhHHHHHHHHHHHHHHHHHHHh-cccCHH-HHHHHHHHHHHcCchhhhHHHHHHHH
Confidence 4999999999999999997543323348999999999999999975 45 789 99999999999999999999999999
Q ss_pred HHHHhhcc-CCCCCCCCcccchhhHHHHHHHHhhcccccccccccccccccccccccchhhcHHHHHHHHHHhhcCCCCc
Q 044478 101 QKMHEANQ-DCDLGDDENVQELYYISLQFRLLRQNGYKISAADVFNSFKDSNGNFKSFLKRDIRGMLSLYEAAHLRVHGE 179 (232)
Q Consensus 101 ~~i~~~~~-~~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~~DvF~~Fkd~~G~Fk~~l~~Dv~glLsLYeAS~L~~~gE 179 (232)
++||+... ..| ... |||+|||+|||||||||+|| ||||++|+|++|+|++++.+||+|||+|||||||+++||
T Consensus 92 ~~i~~~~~~~~~--~~~---DL~~~Al~FRLLR~hGy~VS-~dvF~~F~d~~G~F~~~l~~dv~glL~LYeAs~l~~~gE 165 (555)
T 3n0f_A 92 DRFVSSGGFDGV--TKT---SLHATALSFRLLRQHGFEVS-QEAFSGFKDQNGNFLENLKEDTKAILSLYEASFLALEGE 165 (555)
T ss_dssp HHHHHTCHHHHH--TTT---CHHHHHHHHHHHHHTTCCCC-GGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTC
T ss_pred HHHHhhcccccc--ccC---CHHHHHHHHHHHHhcCCCcC-hHHHhcccccCccchhhhhhhhHHHHHHHHHHhcccCCc
Confidence 99997410 011 123 99999999999999999999 999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhh-cCChhHHHHHHHHcCCCCCCCCChhHHhhcccCC
Q 044478 180 NILNEALTFTVTHLESFTS-QSNTQLAAQVNRALNRPIRKSLPRLEAKHYMPIY 232 (232)
Q Consensus 180 ~iLdeA~~Ft~~~L~~~~~-~~~~~l~~~V~~aL~~P~h~~l~RleaR~yI~~Y 232 (232)
+|||+|+.||+++|++.+. .++++|+++|+|||++||||+|||||||+||++|
T Consensus 166 ~iLdeA~~Fs~~~L~~~~~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y 219 (555)
T 3n0f_A 166 NILDEARVFAISHLKELSEEKIGKELAEQVNHALELPLHRRTQRLEAVWSIEAY 219 (555)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHCHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHhcCCcccCchHHHHHHHHHHh
Confidence 9999999999999998765 5688999999999999999999999999999987
No 5
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=8.8e-70 Score=528.33 Aligned_cols=204 Identities=32% Similarity=0.553 Sum_probs=160.9
Q ss_pred hhccccCCCCCCCCccccccccCCCCccchhHHHHHHHHHHHHHHHHHhccCCccchhhhhHHHHHHhCcccccHHHHHH
Q 044478 19 KESTRRSANFDPTIWGDYFLSYTGDFKESGDASVKHQELKKEIRTMLRADINKPSQTKLDLIDDIQRLGVSYHFESEIDE 98 (232)
Q Consensus 19 ~~~~R~~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~~LkeeVr~ml~~~~~d~~~~~L~lID~lqRLGI~yhFe~EI~~ 98 (232)
.+..||++||+||+|||+||++.+.....+.+.+++++||++||+|+.+ ..|++ ++|+|||+||||||+|||++||++
T Consensus 31 ~~~~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~Lk~~Vr~~~~~-~~d~~-~~l~lID~lqrLGi~~hFe~EI~~ 108 (569)
T 2j5c_A 31 KDRWIRTGGYQPTLWDFSTIQSFDSEYKEEKHLMRAAGMIDQVKMMLQE-EVDSI-RRLELIDDLRRLGISCHFEREIVE 108 (569)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHHHH-CCCHH-HHHHHHHHHHHHTCGGGGHHHHHH
T ss_pred ccccCCCCCCCCCcCCcccccCCCchhhhHHHHHHHHHHHHHHHHHHhc-cccHH-HHHHHHHHHHhCCchhhhHHHHHH
Confidence 3446999999999999999986433222237899999999999999987 45899 999999999999999999999999
Q ss_pred HHHHHH-hhccCCCCCCCCcccchhhHHHHHHHHhhccccccccccccccccccc-ccccchhhcHHHHHHHHHHhhcCC
Q 044478 99 ILQKMH-EANQDCDLGDDENVQELYYISLQFRLLRQNGYKISAADVFNSFKDSNG-NFKSFLKRDIRGMLSLYEAAHLRV 176 (232)
Q Consensus 99 ~L~~i~-~~~~~~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~~DvF~~Fkd~~G-~Fk~~l~~Dv~glLsLYeAS~L~~ 176 (232)
+|++|| +.+.. ... |||+|||+|||||||||+|| ||||++|||++| +|++++.+||+|||+|||||||++
T Consensus 109 ~L~~i~~~~~~~----~~~---Dl~~~al~FRlLR~hGy~Vs-~dvF~~Fkd~~G~~F~~~l~~dv~glL~LY~As~l~~ 180 (569)
T 2j5c_A 109 ILNSKYYTNNEI----DER---DLYSTALRFRLLRQYDFSVS-QEVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLSA 180 (569)
T ss_dssp HHHHHTTSSCCS----CTT---CHHHHHHHHHHHHHTTCCCC-GGGGGGGBCSSSSSBCGGGGGCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhccCc----ccC---ChhhhhHHhHHHHhcCCCcC-HHHHhcccCCCCCccccchhhccHHHHHHHHHHhcCC
Confidence 999999 75431 223 99999999999999999999 999999999999 999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHhhcC-ChhHHHHHHHHcCCCCCCCCChhHHhhcccCC
Q 044478 177 HGENILNEALTFTVTHLESFTSQS-NTQLAAQVNRALNRPIRKSLPRLEAKHYMPIY 232 (232)
Q Consensus 177 ~gE~iLdeA~~Ft~~~L~~~~~~~-~~~l~~~V~~aL~~P~h~~l~RleaR~yI~~Y 232 (232)
+||+|||||+.||++||++.+.++ +++|+++|++||++||||+|||||||+||++|
T Consensus 181 ~gE~iLdeA~~Ft~~~L~~~~~~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y 237 (569)
T 2j5c_A 181 QGEETLRLARDFATKFLQKRVLVDKDINLLSSIERALELPTHWRVQMPNARSFIDAY 237 (569)
T ss_dssp TTCHHHHHHHHHHHHTTSSCC----CHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHhcCccccCcHHHHHHHHHHHh
Confidence 999999999999999999988766 89999999999999999999999999999987
No 6
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=5.3e-69 Score=520.96 Aligned_cols=206 Identities=33% Similarity=0.599 Sum_probs=173.6
Q ss_pred cccCCCCCCCCccccccccCCCCc-cchhHHHHHHHHHHHHHHHHHhccCCccchhhhhHHHHHHhCcccccHHHHHHHH
Q 044478 22 TRRSANFDPTIWGDYFLSYTGDFK-ESGDASVKHQELKKEIRTMLRADINKPSQTKLDLIDDIQRLGVSYHFESEIDEIL 100 (232)
Q Consensus 22 ~R~~a~~~PsiW~d~fl~~~~~~~-~~~~~~~~~~~LkeeVr~ml~~~~~d~~~~~L~lID~lqRLGI~yhFe~EI~~~L 100 (232)
.||+|||+||+|||+||+ ++..+ ..+.+.+++++||++||+|+.+ ..|++ ++|+|||+||||||+|||++||+++|
T Consensus 5 ~r~~~~~~ps~W~~~fl~-s~~~~~~~~~~~~~~~~Lk~~V~~~~~~-~~d~~-~~l~lvD~lqrLGi~~hF~~EI~~~L 81 (549)
T 1n1b_A 5 IRRSGNYQPALWDSNYIQ-SLNTPYTEERHLDRKAELIVQVRILLKE-KMEPV-QQLELIHDLKYLGLSDFFQDEIKEIL 81 (549)
T ss_dssp ----------CCCHHHHH-HCCCSTTSHHHHHHHHHHHHHHHHHHHS-CCCHH-HHHHHHHHHHHTTCGGGGHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCccc-CCCcchhhhHHHHHHHHHHHHHHHHHhc-ccCHH-HHHHhHHHHHhCCchhhhHHHHHHHH
Confidence 499999999999999995 33222 2237899999999999999986 45899 99999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCcccchhhHHHHHHHHhhccccccccccccccccccc-ccccchhhcHHHHHHHHHHhhcCCCCc
Q 044478 101 QKMHEANQDCDLGDDENVQELYYISLQFRLLRQNGYKISAADVFNSFKDSNG-NFKSFLKRDIRGMLSLYEAAHLRVHGE 179 (232)
Q Consensus 101 ~~i~~~~~~~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~~DvF~~Fkd~~G-~Fk~~l~~Dv~glLsLYeAS~L~~~gE 179 (232)
++||+.+..++ .....+.|||+|||+|||||||||+|| ||||++|||++| +|++++.+||+|||+|||||||+++||
T Consensus 82 ~~i~~~~~~~~-~~~~~~~dl~~~al~FRlLR~hGy~Vs-~dvf~~Fk~~~g~~F~~~l~~d~~glL~LY~As~l~~~gE 159 (549)
T 1n1b_A 82 GVIYNEHKCFH-NNEVEKMDLYFTALGFRLLRQHGFNIS-QDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGE 159 (549)
T ss_dssp HHHHHHCHHHH-HCCCCSCCHHHHHHHHHHHHHTTCCCC-GGGGGGGBCTTSSSBCGGGGGCHHHHHHHHHHHTTCCTTC
T ss_pred HHHHhhhcccc-ccccccCChhhchhhhhHHHhcCCCcC-HHHHhhccCCCCCccchhhhhccHHHHHHHHHHhcCCCCh
Confidence 99998753210 011112399999999999999999999 999999999999 999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhc---C-ChhHHHHHHHHcCCCCCCCCChhHHhhcccCC
Q 044478 180 NILNEALTFTVTHLESFTSQ---S-NTQLAAQVNRALNRPIRKSLPRLEAKHYMPIY 232 (232)
Q Consensus 180 ~iLdeA~~Ft~~~L~~~~~~---~-~~~l~~~V~~aL~~P~h~~l~RleaR~yI~~Y 232 (232)
+|||||+.||++||++.+.+ + +++|+++|+|||++|+||+|||||||+||++|
T Consensus 160 ~iL~eA~~Ft~~~L~~~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y 216 (549)
T 1n1b_A 160 DTLELAREFATKCLQKKLDEGGNEIDENLLLWIRHSLDLPLHWRIQSVEARWFIDAY 216 (549)
T ss_dssp HHHHHHHHHHHHHHHHHTC------CHHHHHHHHHHHHSCGGGCCTTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCcHHHHHHHHhcCchhcCchHHHHHHHHHHh
Confidence 99999999999999998875 5 88999999999999999999999999999987
No 7
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=3.7e-52 Score=415.72 Aligned_cols=161 Identities=32% Similarity=0.528 Sum_probs=146.7
Q ss_pred cCCccchhhhhHHHHHHhCcccccHHHHHHHHHHHHhhccC---CCCCCCCcccchhhHHHHHHHHhhcccccccccccc
Q 044478 69 INKPSQTKLDLIDDIQRLGVSYHFESEIDEILQKMHEANQD---CDLGDDENVQELYYISLQFRLLRQNGYKISAADVFN 145 (232)
Q Consensus 69 ~~d~~~~~L~lID~lqRLGI~yhFe~EI~~~L~~i~~~~~~---~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~~DvF~ 145 (232)
+.+++ ++|+|||+||||||+|||++||+++|+.||+.|.. ++ +.++...||++|||+|||||||||+|| ||||+
T Consensus 243 P~d~~-e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~-~~~~~~~Dl~~tAl~FRlLR~~Gy~VS-~dvf~ 319 (764)
T 3p5p_A 243 SIDLL-ERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGW-GRDSLVPDLNTTALGLRTLRMHGYNVS-SDVLN 319 (764)
T ss_dssp CCHHH-HHHHHHHHHHHHTCGGGGHHHHHHHHHHHHHTCCTTCCCS-STTCSSCCHHHHHHHHHHHHHTTCCCC-GGGGG
T ss_pred CCcHH-HHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhccccc-ccCCCCCCHHHHHHHHHHHHhcCCCcc-HhHHH
Confidence 36789 99999999999999999999999999999997753 11 112334599999999999999999999 99999
Q ss_pred cccccccccccc---hhhcHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHhh---cCChhHHHHHHHHcCCCCCCC
Q 044478 146 SFKDSNGNFKSF---LKRDIRGMLSLYEAAHLRVHGENILNEALTFTVTHLESFTS---QSNTQLAAQVNRALNRPIRKS 219 (232)
Q Consensus 146 ~Fkd~~G~Fk~~---l~~Dv~glLsLYeAS~L~~~gE~iLdeA~~Ft~~~L~~~~~---~~~~~l~~~V~~aL~~P~h~~ 219 (232)
+|+|++|+|+++ +.+||+|||+|||||||+++||+|||||+.||++||++.+. .++++|+++|+|||++|||++
T Consensus 320 ~F~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~L~~eV~~aL~~P~~~~ 399 (764)
T 3p5p_A 320 NFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKISTNTKLFKEIEYVVEYPWHMS 399 (764)
T ss_dssp GGBCTTSCBCSCTTCSCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHHTSCSSSHHHHHHHHHHHSCGGGC
T ss_pred hhhcCCCCccccccccccccHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHhcCchhcc
Confidence 999999999974 68999999999999999999999999999999999999875 257889999999999999999
Q ss_pred CChhHHhhcccCC
Q 044478 220 LPRLEAKHYMPIY 232 (232)
Q Consensus 220 l~RleaR~yI~~Y 232 (232)
|||||||+||++|
T Consensus 400 l~Rlear~yI~~Y 412 (764)
T 3p5p_A 400 IPRLEARSYIDSY 412 (764)
T ss_dssp CHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHh
Confidence 9999999999988
No 8
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=5.7e-52 Score=416.78 Aligned_cols=161 Identities=35% Similarity=0.569 Sum_probs=143.6
Q ss_pred cCCccchhhhhHHHHHHhCcccccHHHHHHHHHHHHhhccC---CCCCCCCcccchhhHHHHHHHHhhcccccccccccc
Q 044478 69 INKPSQTKLDLIDDIQRLGVSYHFESEIDEILQKMHEANQD---CDLGDDENVQELYYISLQFRLLRQNGYKISAADVFN 145 (232)
Q Consensus 69 ~~d~~~~~L~lID~lqRLGI~yhFe~EI~~~L~~i~~~~~~---~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~~DvF~ 145 (232)
+.+++ ++|+|||+||||||+|||++||+++|++||+.|.. ++ +.+....||++|||+|||||||||+|| ||||+
T Consensus 295 P~d~~-e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~-~~~~~~~Dl~~tAl~FRlLR~~Gy~VS-~dvf~ 371 (817)
T 3sdr_A 295 PVDLL-ERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGW-GRLNPIADLETTALGFRLLRLHRYNVS-PAIFD 371 (817)
T ss_dssp CCHHH-HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHCCTTCCCS-STTCSSCCHHHHHHHHHHHHHTTCCCC-GGGGG
T ss_pred CCcHH-HHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhccccc-ccCCCCCCHHHHHHHHHHHHHcCCCcc-HhHHH
Confidence 36789 99999999999999999999999999999998753 11 112334599999999999999999999 99999
Q ss_pred cccccccccccch---hhcHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHhhc--------CChhHHHHHHHHcCC
Q 044478 146 SFKDSNGNFKSFL---KRDIRGMLSLYEAAHLRVHGENILNEALTFTVTHLESFTSQ--------SNTQLAAQVNRALNR 214 (232)
Q Consensus 146 ~Fkd~~G~Fk~~l---~~Dv~glLsLYeAS~L~~~gE~iLdeA~~Ft~~~L~~~~~~--------~~~~l~~~V~~aL~~ 214 (232)
+|+|++|+|++++ .+||+|||+|||||||+++||+|||||+.||++||++.+.. ++++|+++|+|||++
T Consensus 372 ~F~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~~~~~~~~~L~~eV~~aL~~ 451 (817)
T 3sdr_A 372 NFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSAWNNKQNLSQEIKYALKT 451 (817)
T ss_dssp GGBCC--CBCCCSSCHHHHHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTSGGGGSHHHHHTTHHHHHHHHHHC
T ss_pred HHhhcCCCceechhhhchhhHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhccccccccccCCcHHHHHHHHhcC
Confidence 9999999999865 69999999999999999999999999999999999997753 236799999999999
Q ss_pred CCCCCCChhHHhhcccCC
Q 044478 215 PIRKSLPRLEAKHYMPIY 232 (232)
Q Consensus 215 P~h~~l~RleaR~yI~~Y 232 (232)
|||++|||||||+||++|
T Consensus 452 P~~~~l~Rlear~yI~~Y 469 (817)
T 3sdr_A 452 SWHASVPRVEAKRYCQVY 469 (817)
T ss_dssp CSTTCCHHHHHHHHHTTC
T ss_pred chhccChHHHHHHHHHHh
Confidence 999999999999999998
No 9
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=6.5e-52 Score=414.93 Aligned_cols=162 Identities=31% Similarity=0.540 Sum_probs=146.2
Q ss_pred cCCccchhhhhHHHHHHhCcccccHHHHHHHHHHHHhhccCCCC--CCCCcccchhhHHHHHHHHhhccccccccccccc
Q 044478 69 INKPSQTKLDLIDDIQRLGVSYHFESEIDEILQKMHEANQDCDL--GDDENVQELYYISLQFRLLRQNGYKISAADVFNS 146 (232)
Q Consensus 69 ~~d~~~~~L~lID~lqRLGI~yhFe~EI~~~L~~i~~~~~~~~~--~~~~~~~dL~~~AL~FRLLRqhGy~VS~~DvF~~ 146 (232)
+.+++ ++|+|||+||||||+|||++||+++|+.||+.|...-. ..+..+.||++|||+|||||||||+|| ||||++
T Consensus 267 P~d~~-e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS-~dvf~~ 344 (785)
T 3s9v_A 267 PLDLF-ERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVS-SDVLKT 344 (785)
T ss_dssp CCHHH-HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCC-GGGGGG
T ss_pred CCcHH-HHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhccccccccCCCCCHHHHHHHHHHHHhcCCCCC-HHHHHH
Confidence 35789 99999999999999999999999999999998753100 112334599999999999999999999 999999
Q ss_pred ccccccccccch---hhcHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHhhc--------CChhHHHHHHHHcCCC
Q 044478 147 FKDSNGNFKSFL---KRDIRGMLSLYEAAHLRVHGENILNEALTFTVTHLESFTSQ--------SNTQLAAQVNRALNRP 215 (232)
Q Consensus 147 Fkd~~G~Fk~~l---~~Dv~glLsLYeAS~L~~~gE~iLdeA~~Ft~~~L~~~~~~--------~~~~l~~~V~~aL~~P 215 (232)
|+|++|+|++++ .+||+|||+|||||||+++||+|||||+.||++||++.+.. ++++|+++|+|||++|
T Consensus 345 F~d~~g~F~~~~~e~~~dv~g~L~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~d~~~~~~~L~~eV~~aL~~P 424 (785)
T 3s9v_A 345 FRDENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAFKKNIRGEVEYALKYP 424 (785)
T ss_dssp GBCTTSCBCSSTTCCCCCHHHHHHHHHHHTSCCTTCHHHHHHHHHHHHHHHHHTTTCCTTCTTCSSSCHHHHHHHHHHSC
T ss_pred HHhcCCCeeeccccccccccccHHHHhHhhcCCCCcHHHHHHHHHHHHHHHHHHhccccccccccCCcHHHHHHHHhCCc
Confidence 999999999866 69999999999999999999999999999999999997653 4678999999999999
Q ss_pred CCCCCChhHHhhcccCC
Q 044478 216 IRKSLPRLEAKHYMPIY 232 (232)
Q Consensus 216 ~h~~l~RleaR~yI~~Y 232 (232)
||++|||||||+||++|
T Consensus 425 ~~~~l~RleaR~yI~~Y 441 (785)
T 3s9v_A 425 WHKSMPRLEARSYIENY 441 (785)
T ss_dssp GGGCCHHHHHHHHHHHC
T ss_pred cccCchHHHHHHHHHHh
Confidence 99999999999999988
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=100.00 E-value=9.7e-51 Score=403.25 Aligned_cols=179 Identities=32% Similarity=0.502 Sum_probs=155.1
Q ss_pred HHHHHHHHHHHHHHHHhc----cCCccchhhhhHHHHHHhCcccccHHHHHHHHHHHHhhccCCCC--CCCCcccchhhH
Q 044478 51 SVKHQELKKEIRTMLRAD----INKPSQTKLDLIDDIQRLGVSYHFESEIDEILQKMHEANQDCDL--GDDENVQELYYI 124 (232)
Q Consensus 51 ~~~~~~LkeeVr~ml~~~----~~d~~~~~L~lID~lqRLGI~yhFe~EI~~~L~~i~~~~~~~~~--~~~~~~~dL~~~ 124 (232)
.+..+-|+..|+++.... +.+++ ++|+|||+||||||+|||++||+++|+.||+.|..... ..+..+.||++|
T Consensus 220 ~~~l~YL~~~v~k~~g~VP~~yP~d~~-e~L~lID~LqRLGIs~hFe~EI~~~L~~i~~~~~~~g~~~~~~~~~~DL~~t 298 (727)
T 3pya_A 220 SNCLEYLRNAVKRFNGGVPNVFPVDLF-EHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDT 298 (727)
T ss_dssp HHHHHHHHHHHHHTTTCCCSSCCCHHH-HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHTCCTTCCCSSSSCSCCCHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCCcHH-HHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcCcccccCCCCCCHHHH
Confidence 456678888888865332 36889 99999999999999999999999999999998642100 112234599999
Q ss_pred HHHHHHHhhcccccccccccccccccccccccc---hhhcHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHhhc--
Q 044478 125 SLQFRLLRQNGYKISAADVFNSFKDSNGNFKSF---LKRDIRGMLSLYEAAHLRVHGENILNEALTFTVTHLESFTSQ-- 199 (232)
Q Consensus 125 AL~FRLLRqhGy~VS~~DvF~~Fkd~~G~Fk~~---l~~Dv~glLsLYeAS~L~~~gE~iLdeA~~Ft~~~L~~~~~~-- 199 (232)
||+|||||||||+|| ||||++|+ ++|+|++. +.+|++|||+|||||||+++||+|||||+.||+++|++.+..
T Consensus 299 AL~FRLLRqhGy~VS-~DvF~~Fk-~~G~F~~~~~e~~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~ 376 (727)
T 3pya_A 299 AMAFRLLRQHGYQVS-ADVFKNFE-KEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREE 376 (727)
T ss_dssp HHHHHHHHHTTCCCC-GGGGGGGE-ETTEECSSTTCCCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCC-HHHHHhcc-CCCcccccccccccccHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999 99999999 88999943 368999999999999999999999999999999999987642
Q ss_pred ------CChhHHHHHHHHcCCCCCCCCChhHHhhcccCC
Q 044478 200 ------SNTQLAAQVNRALNRPIRKSLPRLEAKHYMPIY 232 (232)
Q Consensus 200 ------~~~~l~~~V~~aL~~P~h~~l~RleaR~yI~~Y 232 (232)
++++|+++|+|||++|+||+||||||||||++|
T Consensus 377 ~~dkw~~~~~L~~~V~~aL~~P~~~~l~RleaR~yI~~Y 415 (727)
T 3pya_A 377 LIDKWIIMKDLPGEIGFALEIPWYASLPRVETRFYIDQY 415 (727)
T ss_dssp CCCSSEECSCHHHHHHHHHHSCGGGCCHHHHHHHHHHHC
T ss_pred cccccccCCcHHHHHHHHhcCcHhcCChHHHHHHHHHHh
Confidence 257899999999999999999999999999988
No 11
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=97.96 E-value=2.3e-06 Score=86.48 Aligned_cols=49 Identities=24% Similarity=0.331 Sum_probs=27.3
Q ss_pred hhhccccCCCCCCCCccccccccCCCCccchhHHHHHHHHHHHHHHHHH
Q 044478 18 EKESTRRSANFDPTIWGDYFLSYTGDFKESGDASVKHQELKKEIRTMLR 66 (232)
Q Consensus 18 ~~~~~R~~a~~~PsiW~d~fl~~~~~~~~~~~~~~~~~~LkeeVr~ml~ 66 (232)
.++..||+|||+||+|+++|+++.......+.+.+++++|+++||+||.
T Consensus 20 ~~~~~Rrsany~Ps~W~~~~i~sl~~~~~~~~~~~~~~~Lie~VK~~l~ 68 (817)
T 3sdr_A 20 TSGLIRRTANPHPNVWGYDLVHSLKSPYIDSSYRERAEVLVSEIKAMLN 68 (817)
T ss_dssp ---------------CHHHHHHTCCCGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCCCCCCCCCCCeeeccCCcccchhHHHHHHHHHHHHHHHhc
Confidence 3445699999999999999998643322334889999999999999997
No 12
>1pd3_A Nonstructural protein NS2; influenza virus A, NEP/NS2, unknown function; 2.60A {Influenza a virus} SCOP: a.30.3.1
Probab=61.27 E-value=5.3 Score=27.16 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhHHHHHHh
Q 044478 52 VKHQELKKEIRTMLRADINKPSQTKLDLIDDIQRL 86 (232)
Q Consensus 52 ~~~~~LkeeVr~ml~~~~~d~~~~~L~lID~lqRL 86 (232)
+++.-|.+|||..|.. +.+++ +++.++.+||-|
T Consensus 16 EeIRwlIeE~Rh~Lk~-Tensf-eQItfmqalQLl 48 (58)
T 1pd3_A 16 EEIRWLIEEVRHRLKI-TENSF-EQITFMQALQLL 48 (58)
T ss_dssp HHHHHHHHHHHHTCCC-CTTSH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-hhchH-HHHHHHHHHHHH
Confidence 4566677888887764 57899 999999888865
No 13
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=55.39 E-value=6.2 Score=39.70 Aligned_cols=40 Identities=28% Similarity=0.533 Sum_probs=16.5
Q ss_pred CCCCCCcccccccc-CCCCccchhHHHHHHHHHHHHHHHHH
Q 044478 27 NFDPTIWGDYFLSY-TGDFKESGDASVKHQELKKEIRTMLR 66 (232)
Q Consensus 27 ~~~PsiW~d~fl~~-~~~~~~~~~~~~~~~~LkeeVr~ml~ 66 (232)
+|+|++|++.++.. .++......+.++++.|++++|+||.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 45 (785)
T 3s9v_A 5 EFPPGFWKDDLIDSLTSSHKVAASDEKRIETLISEIKNMFR 45 (785)
T ss_dssp ----------------------CCHHHHHHHHHHHHHHHHH
T ss_pred cCCcccCcccccccCCCccccCcchhHHHHHHHHHHHHHhh
Confidence 78999999999974 33332222678899999999999995
No 14
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=51.39 E-value=9 Score=26.13 Aligned_cols=28 Identities=32% Similarity=0.580 Sum_probs=21.1
Q ss_pred HhhcccccccccccccccccccccccchhhcHHHHHHHHHHhhcC
Q 044478 131 LRQNGYKISAADVFNSFKDSNGNFKSFLKRDIRGMLSLYEAAHLR 175 (232)
Q Consensus 131 LRqhGy~VS~~DvF~~Fkd~~G~Fk~~l~~Dv~glLsLYeAS~L~ 175 (232)
-|.+||.|| +-|... ..+++-|+|+++-
T Consensus 22 Ar~nG~~Vs----------dRGRIp-------~~V~eAY~aA~~~ 49 (55)
T 2kng_A 22 ARRNGHNVS----------TRGRIP-------ADVIDAYHAATLE 49 (55)
T ss_dssp HHHTTCCCC----------SSSCCC-------HHHHHHHHHHHHH
T ss_pred HHHcCCcCC----------CCCCCC-------HHHHHHHHHcCCc
Confidence 578999999 457653 5667789988764
No 15
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=30.87 E-value=1.3e+02 Score=20.74 Aligned_cols=30 Identities=10% Similarity=0.153 Sum_probs=21.1
Q ss_pred CCccchhhhhHHHHHHhCcccccHHHHHHHHHHH
Q 044478 70 NKPSQTKLDLIDDIQRLGVSYHFESEIDEILQKM 103 (232)
Q Consensus 70 ~d~~~~~L~lID~lqRLGI~yhFe~EI~~~L~~i 103 (232)
+..+ ..=++...+.++|++ ++|+++++..+
T Consensus 24 dG~I-~~~el~~~l~~~g~~---~~~~~~i~~~~ 53 (95)
T 1c07_A 24 DGFV-SGLEVREIFLKTGLP---STLLAHIWSLC 53 (95)
T ss_dssp SSEE-CHHHHHHHHHTTTCC---HHHHHHHHHHH
T ss_pred CCcE-eHHHHHHHHHHcCCC---HHHHHHHHHHH
Confidence 3445 666788889999976 66777766544
No 16
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=29.85 E-value=1.2e+02 Score=20.78 Aligned_cols=69 Identities=14% Similarity=0.161 Sum_probs=38.6
Q ss_pred HHHHHHHHhc---cCCccchhhhhHHHHHHhCcccccHHHHHHHHHHHHhhccCCCCCCCCcccchh--hHHHHHHHHhh
Q 044478 59 KEIRTMLRAD---INKPSQTKLDLIDDIQRLGVSYHFESEIDEILQKMHEANQDCDLGDDENVQELY--YISLQFRLLRQ 133 (232)
Q Consensus 59 eeVr~ml~~~---~~d~~~~~L~lID~lqRLGI~yhFe~EI~~~L~~i~~~~~~~~~~~~~~~~dL~--~~AL~FRLLRq 133 (232)
++++.+|... .+..+ ..=++...+.++|++ ++|+++++..+ ..+ ++..+ |.. ..++.-.-.+|
T Consensus 9 ~~~~~~F~~~D~d~dG~I-~~~el~~~l~~~g~~---~~~~~~i~~~~---D~d---~dG~i--~~~EF~~~~~~~~~~~ 76 (92)
T 1fi6_A 9 QYYVNQFKTIQPDLNGFI-PGSAAKEFFTKSKLP---ILELSHIWELS---DFD---KDGAL--TLDEFCAAFHLVVARK 76 (92)
T ss_dssp HHHHHHHTTTCCSTTCEE-EHHHHHHHHHHHSSC---HHHHHHHHHHH---CTT---CSSEE--EHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcC-cHHHHHHHHHHcCCC---HHHHHHHHHHH---CCC---CCCCC--CHHHHHHHHHHHHHHH
Confidence 4555666432 23345 667788889999976 56777666543 111 12111 222 23343334568
Q ss_pred cccccc
Q 044478 134 NGYKIS 139 (232)
Q Consensus 134 hGy~VS 139 (232)
.|+.++
T Consensus 77 ~g~~lp 82 (92)
T 1fi6_A 77 NGYDLP 82 (92)
T ss_dssp HSCCCC
T ss_pred cCCCCC
Confidence 899988
No 17
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=28.41 E-value=1.6e+02 Score=20.78 Aligned_cols=64 Identities=14% Similarity=0.240 Sum_probs=39.8
Q ss_pred CccchhhhhHHHHHHhCcccccHHHHHHHHHHHHhhccCCCCCCCCcccchhhHHHHHHHHhhcccccccccccc
Q 044478 71 KPSQTKLDLIDDIQRLGVSYHFESEIDEILQKMHEANQDCDLGDDENVQELYYISLQFRLLRQNGYKISAADVFN 145 (232)
Q Consensus 71 d~~~~~L~lID~lqRLGI~yhFe~EI~~~L~~i~~~~~~~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~~DvF~ 145 (232)
..+ ..=++...+.++|++ ++|+++++..+=.. . +..+=-+=+..+|.-.-+.|+|+.++ .+.+.
T Consensus 26 G~I-s~~el~~~l~~~~l~---~~~l~~i~~~~D~d-~-----dG~i~~~EF~~~~~~~~~~~~g~~~~-~~~l~ 89 (99)
T 1qjt_A 26 GRV-LALDAAAFLKKSGLP---DLILGKIWDLADTD-G-----KGVLSKQEFFVALRLVACAQNGLEVS-LSSLS 89 (99)
T ss_dssp SCC-CSHHHHHHHHTSSSC---HHHHHHHHHHHCCS-S-----SSSCCSHHHHHHHHHHHHHTTTCCSS-GGGCS
T ss_pred CcC-CHHHHHHHHHHcCCC---HHHHHHHHHHHCCC-C-----CCcCCHHHHHHHHHHHHHHHcCCCCC-hhhcc
Confidence 445 566778888999976 66776666554111 1 11110033456777778899999999 66553
No 18
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=23.31 E-value=69 Score=21.65 Aligned_cols=26 Identities=19% Similarity=0.238 Sum_probs=22.4
Q ss_pred hhhhhHHHHHHhCcccccHHHHHHHHHHH
Q 044478 75 TKLDLIDDIQRLGVSYHFESEIDEILQKM 103 (232)
Q Consensus 75 ~~L~lID~lqRLGI~yhFe~EI~~~L~~i 103 (232)
+.+.||...+++|++ -+||.+.|...
T Consensus 14 ewl~LI~~Ak~lGls---leEIrefL~l~ 39 (57)
T 1b0n_B 14 EWVELMVEAKEANIS---PEEIRKYLLLN 39 (57)
T ss_dssp HHHHHHHHHHHTTCC---HHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCC---HHHHHHHHHHh
Confidence 889999999999998 58898888544
No 19
>3qqa_A CMER; alpha-helical, helix-turn-helix, DNA-binding, transcription regulation, transcription repressor, drug binding, transcri; HET: TCH; 2.20A {Campylobacter jejuni} PDB: 3hgy_A* 3qps_A* 2qco_A 3hgg_A*
Probab=21.69 E-value=99 Score=23.39 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=20.2
Q ss_pred cccccccccccccccccccchhhcHHHHHHHHHH
Q 044478 138 ISAADVFNSFKDSNGNFKSFLKRDIRGMLSLYEA 171 (232)
Q Consensus 138 VS~~DvF~~Fkd~~G~Fk~~l~~Dv~glLsLYeA 171 (232)
||..-++..|.++++=|..-+..-...+....++
T Consensus 51 vs~~tlY~~F~sK~~L~~~~~~~~~~~~~~~~~~ 84 (216)
T 3qqa_A 51 GSYSNIYDGFKSKEGLFFEILDDICKKHFHLIYS 84 (216)
T ss_dssp TSCCSSSCSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4434688999988776655554444444444433
Done!