BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044482
(345 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 131/216 (60%), Gaps = 7/216 (3%)
Query: 131 IEFYKTMHIMDCIYLTMLPMMLNLFNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASCL 190
I F K + Y P +FN+ M +H+ I MKKILE Y GF+ LK LVDV
Sbjct: 152 IPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGT 211
Query: 191 GANMSLIVNTYPQITGINFDLPYVIKNAPC---VEHVEGDMFVNVPSGQAIFTKSVLLNW 247
GA ++ IV+ YP I GINFDLP+VI++AP VEHV GDMFV++P A+F K + +W
Sbjct: 212 GAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDW 271
Query: 248 SDEQCLKILKNCYDALPKSRKHGRTQLRSKRGLPESPEFSSINRNILTLDIVMYDLFPQA 307
SDE CLK LKNCY+ALP + K + ++ LP +P+ S + ++ +D++M P
Sbjct: 272 SDEHCLKFLKNCYEALPDNGK----VIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGG 327
Query: 308 KGRTAGEFKALAMAAGFGTIKVICRSYCYWVIEFYK 343
K RT EF+ LA AGF KV C ++ +++EF K
Sbjct: 328 KERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Query: 6 GLHLFDYASKDARLQNLFNQSMHNHTAI----------GFEELNELVDVAGGLGVNMSLI 55
G+ F+Y D R +FN+ M +H+ I GFE L LVDV GG G ++ I
Sbjct: 159 GMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTI 218
Query: 56 VNTYSQIRGINFDLPHVIENASSSP 80
V+ Y I+GINFDLPHVIE+A S P
Sbjct: 219 VSKYPTIKGINFDLPHVIEDAPSYP 243
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 77 SSSPVSRNISTIDVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICRAYCYWVIEFYK 135
SS ++ + IDV+M PG KERT +EF LA GAGF KV C A+ +++EF K
Sbjct: 305 DSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 134/223 (60%), Gaps = 18/223 (8%)
Query: 124 RAYCYWVIEFYKTMHIMDCIYLTMLPMMLNLFNQSMQNHTAIVMKKILEIYKGFKELKKL 183
+AY + +++ T H ++ +FN+ M +++ I MKKILE+Y GF+ L +
Sbjct: 159 KAYGMNIFDYHGTDHRIN-----------KVFNKGMSSNSTITMKKILEMYNGFEGLTTI 207
Query: 184 VDVASCLGANMSLIVNTYPQITGINFDLPYVIKNAPC---VEHVEGDMFVNVPSGQAIFT 240
VDV GA S+IV YP I INFDLP+VI++AP VEH+ GDMF VP G AIF
Sbjct: 208 VDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFI 267
Query: 241 KSVLLNWSDEQCLKILKNCYDALPKSRKHGRTQLRSKRGLPESPEFSSINRNILTLDIVM 300
K + +WSDE CLK+LKNCY ALP HG+ + ++ LP SP+ S + ++ D +M
Sbjct: 268 KWICHDWSDEHCLKLLKNCYAALP---DHGKV-IVAEYILPPSPDPSIATKVVIHTDALM 323
Query: 301 YDLFPQAKGRTAGEFKALAMAAGFGTIKVICRSYCYWVIEFYK 343
P K RT EF+ALAMA+GF KV ++ +V+EF K
Sbjct: 324 LAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Query: 6 GLHLFDYASKDARLQNLFNQSMHNHTAI----------GFEELNELVDVAGGLGVNMSLI 55
G+++FDY D R+ +FN+ M +++ I GFE L +VDV GG G S+I
Sbjct: 162 GMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMI 221
Query: 56 VNTYSQIRGINFDLPHVIENASS 78
V Y I INFDLPHVI++A +
Sbjct: 222 VAKYPSINAINFDLPHVIQDAPA 244
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 89 DVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICRAYCYWVIEFYKT 136
D +M PG KERT +EF ALA+ +GF KV A+ +V+EF KT
Sbjct: 320 DALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLKT 367
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 125/219 (57%), Gaps = 13/219 (5%)
Query: 131 IEFYKTMHIMDCIYLTMLPMMLNLFNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASCL 190
I F K + Y P +FN+ M+NH+ I+ KK+LE+Y GF+ L LVDV +
Sbjct: 153 IPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGV 212
Query: 191 GANMSLIVNTYPQITGINFDLPYVIKNA---PCVEHVEGDMFVNVPSGQAIFTKSVLLNW 247
GA ++ I YP I G+NFDLP+VI A P V HV GDMF VPSG I K +L +W
Sbjct: 213 GATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDW 272
Query: 248 SDEQCLKILKNCYDALPKSRKHGRTQLRSKRGLPESPEFSSINRNILTLDIVMYDLFPQA 307
SD+ C +LKNCYDALP HG+ L + LP +PE + ++ + +D++M P
Sbjct: 273 SDQHCATLLKNCYDALP---AHGKVVL-VQCILPVNPEANPSSQGVFHVDMIMLAHNPGG 328
Query: 308 KGRTAGEFKALAMAAGFGTIKVICRSYCY---WVIEFYK 343
+ R EF+ALA AGF +K +Y Y W IEF K
Sbjct: 329 RERYEREFQALARGAGFTGVK---STYIYANAWAIEFTK 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 6 GLHLFDYASKDARLQNLFNQSMHNHTAI----------GFEELNELVDVAGGLGVNMSLI 55
G+ F+Y D R +FN+ M NH+ I GFE L LVDV GG+G ++ I
Sbjct: 160 GMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAI 219
Query: 56 VNTYSQIRGINFDLPHVIENASSSP 80
Y I+G+NFDLPHVI A P
Sbjct: 220 AAHYPTIKGVNFDLPHVISEAPQFP 244
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 75 NASSSPVSRNISTIDVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICRAYCYWVIEFY 134
N ++P S+ + +D++M PG +ER EF ALA GAGF +K W IEF
Sbjct: 304 NPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFT 363
Query: 135 K 135
K
Sbjct: 364 K 364
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 130/218 (59%), Gaps = 10/218 (4%)
Query: 131 IEFYKTMH-IMDCIYLTMLPMMLNLFNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASC 189
I+ +K +H + ++ M +FN+SM + A MK++LEIY GF+ + LVDV
Sbjct: 160 IDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGG 219
Query: 190 LGANMSLIVNTYPQITGINFDLPYVIKNAP---CVEHVEGDMFVNVPSGQAIFTKSVLLN 246
G N+ LI++ YP I GINFDLP VI+NAP +EHV GDMF +VP G A+ K+V N
Sbjct: 220 SGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHN 279
Query: 247 WSDEQCLKILKNCYDALPKSRKHGRTQLRSKRGLPESPEFSSINRNILTLDIVMYDLFPQ 306
WSDE+C++ L NC+ AL + K + LPE P S ++ + TLD +M+ +
Sbjct: 280 WSDEKCIEFLSNCHKALSPNGKVIIVEFI----LPEEPNTSEESKLVSTLDNLMF-ITVG 334
Query: 307 AKGRTAGEFKALAMAAGFGTIKVICRSY-CYWVIEFYK 343
+ RT +++ L+ +GF +V CR++ V+EFYK
Sbjct: 335 GRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Query: 5 NGLHLFDYASKDARLQNLFNQSMHNHTAI----------GFEELNELVDVAGGLGVNMSL 54
+G+ +++ KD ++ +FN+SM + A GFE ++ LVDV GG G N+ L
Sbjct: 167 HGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLEL 226
Query: 55 IVNTYSQIRGINFDLPHVIENA 76
I++ Y I+GINFDLP VIENA
Sbjct: 227 IISKYPLIKGINFDLPQVIENA 248
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 65 INFDLPHVIENASSSPVSRNISTIDVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICR 124
+ F LP E ++S S+ +ST+D +M+ + G +ERT +++ L+ +GF +V CR
Sbjct: 305 VEFILP---EEPNTSEESKLVSTLDNLMF-ITVGGRERTEKQYEKLSKLSGFSKFQVACR 360
Query: 125 AY-CYWVIEFYK 135
A+ V+EFYK
Sbjct: 361 AFNSLGVMEFYK 372
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 154 LFNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASCLGANMSLIVNTYPQITGINFDLPY 213
+FN+S + A K+ LEIY GF+ + LVDV G N+ LI++ YP I GINFDLP
Sbjct: 184 IFNKSXVDVCATEXKRXLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQ 243
Query: 214 VIKNAP---CVEHVEGDMFVNVPSGQAIFTKSVLLNWSDEQCLKILKNCYDALPKSRKHG 270
VI+NAP +EHV GD F +VP G A K+V NWSDE+C++ L NC+ AL + K
Sbjct: 244 VIENAPPLSGIEHVGGDXFASVPQGDAXILKAVCHNWSDEKCIEFLSNCHKALSPNGKVI 303
Query: 271 RTQLRSKRGLPESPEFSSINRNILTLDIVMYDLFPQAKGRTAGEFKALAMAAGFGTIKVI 330
+ LPE P S ++ + TLD + + + + RT +++ L+ +GF +V
Sbjct: 304 IVEFI----LPEEPNTSEESKLVSTLDNLXF-ITVGGRERTEKQYEKLSKLSGFSKFQVA 358
Query: 331 CRSY-CYWVIEFYK 343
CR++ V EFYK
Sbjct: 359 CRAFNSLGVXEFYK 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 10/82 (12%)
Query: 5 NGLHLFDYASKDARLQNLFNQSMHNHTAI----------GFEELNELVDVAGGLGVNMSL 54
+G+ +++ KD + +FN+S + A GFE ++ LVDV GG G N+ L
Sbjct: 167 HGVTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYTGFEGISTLVDVGGGSGRNLEL 226
Query: 55 IVNTYSQIRGINFDLPHVIENA 76
I++ Y I+GINFDLP VIENA
Sbjct: 227 IISKYPLIKGINFDLPQVIENA 248
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 65 INFDLPHVIENASSSPVSRNISTIDVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICR 124
+ F LP E ++S S+ +ST+D + + + G +ERT +++ L+ +GF +V CR
Sbjct: 305 VEFILP---EEPNTSEESKLVSTLDNLXF-ITVGGRERTEKQYEKLSKLSGFSKFQVACR 360
Query: 125 AY-CYWVIEFYK 135
A+ V EFYK
Sbjct: 361 AFNSLGVXEFYK 372
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 6/191 (3%)
Query: 155 FNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASCLGANMSLIVNTYPQITGINFDLPYV 214
FN +M + + ++ + + F L+ +VDV G +I T+P++ I FD P V
Sbjct: 164 FNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQV 223
Query: 215 IKN---APCVEHVEGDMFVNVPSGQAIFTKSVLLNWSDEQCLKILKNCYDALPKSRKHGR 271
++N + + +V GDMF ++P+ A+ K +L NW+D+ CL+ILK C +A+ K G+
Sbjct: 224 VENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGK 283
Query: 272 TQLRSKRGLPESPEFSSINRNILTLDIVMYDLFPQAKGRTAGEFKALAMAAGFGTIKVIC 331
+ + + + + + + L +D+ M L K R E+K L + AGF K+
Sbjct: 284 VTIIDMV-IDKKKDENQVTQIKLLMDVNMACL--NGKERNEEEWKKLFIEAGFQHYKISP 340
Query: 332 RSYCYWVIEFY 342
+ +IE Y
Sbjct: 341 LTGFLSLIEIY 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 6 GLHLFDYASKDARLQNLFNQSMHNHTAI----------GFEELNELVDVAGGLGVNMSLI 55
G +D+ K+ FN +M + + + F+ L +VDV GG G +I
Sbjct: 147 GSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKII 206
Query: 56 VNTYSQIRGINFDLPHVIENASSSPVSRNISTIDVVMYNLFPGA 99
T+ +++ I FD P V+EN S S N++ + M+ P A
Sbjct: 207 CETFPKLKCIVFDRPQVVENLSG---SNNLTYVGGDMFTSIPNA 247
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 105/202 (51%), Gaps = 6/202 (2%)
Query: 144 YLTMLPMMLNLFNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASCLGANMSLIVNTYPQ 203
+L P L+N ++ + + ++ + + F+ L+ +VDV G +I T+P+
Sbjct: 158 FLNKNPEYNTLYNDALASDSKMINLAMKDCNLVFEGLESIVDVGGGNGTTGKIICETFPK 217
Query: 204 ITGINFDLPYVIKN---APCVEHVEGDMFVNVPSGQAIFTKSVLLNWSDEQCLKILKNCY 260
+T + FD P V++N + + +V GDMF++VP A+ K+VL +W+D+ C+KILK C
Sbjct: 218 LTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPKADAVLLKAVLHDWTDKDCIKILKKCK 277
Query: 261 DALPKSRKHGRTQLRSKRGLPESPEFSSINRNILTLDIVMYDLFPQAKGRTAGEFKALAM 320
+A+ K G+ + + E + + + + L +++ + + K R E+K L +
Sbjct: 278 EAVTSDGKRGKV-IVIDMVINEKKDENQLTQIKLLMNVTISCV--NGKERNEEEWKKLFI 334
Query: 321 AAGFGTIKVICRSYCYWVIEFY 342
AGF K+ + +IE Y
Sbjct: 335 EAGFQDYKISPFTGLMSLIEIY 356
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 6 GLHLFDYASKDARLQNLFNQSMHNHTA----------IGFEELNELVDVAGGLGVNMSLI 55
G L+++ +K+ L+N ++ + + + FE L +VDV GG G +I
Sbjct: 152 GCDLWEFLNKNPEYNTLYNDALASDSKMINLAMKDCNLVFEGLESIVDVGGGNGTTGKII 211
Query: 56 VNTYSQIRGINFDLPHVIENASSS 79
T+ ++ + FD P V+EN S
Sbjct: 212 CETFPKLTCVVFDRPKVVENLCGS 235
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
Query: 152 LNLFNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASCLGANMSLIVNTYPQITGINFDL 211
L++F +M + + + + E + F+ L+ LVDV G LI +P + FD
Sbjct: 166 LSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ 225
Query: 212 PYVIKNAPCVEH---VEGDMFVNVPSGQAIFTKSVLLNWSDEQCLKILKNCYDALPKSRK 268
P V+ N E+ V GDMF ++PS A+ K VL +W+DEQ LKILKN +A+ K
Sbjct: 226 PQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGK 285
Query: 269 HGRTQLRSKRGLPESPEFSSINRNILTLDIVMYDLFPQAKGRTAGEFKALAMAAGFGTIK 328
G+ + + E+ + + L D+VM +F K RT E++ L AGF + K
Sbjct: 286 DGKVIIID-ISIDETSDDRGLTELQLDYDLVMLTMF-LGKERTKQEWEKLIYDAGFSSYK 343
Query: 329 VICRSYCYWVIEFY 342
+ S +IE Y
Sbjct: 344 ITPISGFKSLIEVY 357
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 89 DVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICRAYCYWVIEFY 134
D+VM +F G KERT +E+ L AGF + K+ + +IE Y
Sbjct: 313 DLVMLTMFLG-KERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY 357
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
Query: 152 LNLFNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASCLGANMSLIVNTYPQITGINFDL 211
L++F +M + + + + E + F+ L+ LVDV G LI +P + FD
Sbjct: 162 LSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ 221
Query: 212 PYVIKNAPCVEH---VEGDMFVNVPSGQAIFTKSVLLNWSDEQCLKILKNCYDALPKSRK 268
P V+ N E+ V GDMF ++PS A+ K VL +W+DEQ LKILKN +A+ K
Sbjct: 222 PQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGK 281
Query: 269 HGRTQLRSKRGLPESPEFSSINRNILTLDIVMYDLFPQAKGRTAGEFKALAMAAGFGTIK 328
G+ + + E+ + + L D+VM +F K RT E++ L AGF + K
Sbjct: 282 DGKVIIID-ISIDETSDDRGLTELQLDYDLVMLTMF-LGKERTKQEWEKLIYDAGFSSYK 339
Query: 329 VICRSYCYWVIEFY 342
+ S +IE Y
Sbjct: 340 ITPISGFKSLIEVY 353
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 89 DVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICRAYCYWVIEFY 134
D+VM +F G KERT +E+ L AGF + K+ + +IE Y
Sbjct: 309 DLVMLTMFLG-KERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY 353
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
Query: 152 LNLFNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASCLGANMSLIVNTYPQITGINFDL 211
L++F +M + + + + E + F+ L+ LVDV G LI +P + FD
Sbjct: 165 LSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ 224
Query: 212 PYVIKNAPCVEH---VEGDMFVNVPSGQAIFTKSVLLNWSDEQCLKILKNCYDALPKSRK 268
P V+ N E+ V GDMF ++PS A+ K VL +W+DEQ LKILKN +A+ K
Sbjct: 225 PQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGK 284
Query: 269 HGRTQLRSKRGLPESPEFSSINRNILTLDIVMYDLFPQAKGRTAGEFKALAMAAGFGTIK 328
G+ + + E+ + + L D+VM +F K RT E++ L AGF + K
Sbjct: 285 DGKVIIID-ISIDETSDDRGLTELQLDYDLVMLTMF-LGKERTKQEWEKLIYDAGFSSYK 342
Query: 329 VICRSYCYWVIEFY 342
+ S +IE Y
Sbjct: 343 ITPISGFKSLIEVY 356
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 89 DVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICRAYCYWVIEFY 134
D+VM +F G KERT +E+ L AGF + K+ + +IE Y
Sbjct: 312 DLVMLTMFLG-KERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVY 356
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 6/202 (2%)
Query: 144 YLTMLPMMLNLFNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASCLGANMSLIVNTYPQ 203
+L P FN + + + ++ + + F L+ +VDV G +I T+P+
Sbjct: 153 FLDKNPEYNTSFNDAXASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPK 212
Query: 204 ITGINFDLPYVIKN---APCVEHVEGDMFVNVPSGQAIFTKSVLLNWSDEQCLKILKNCY 260
+ I FD P V++N + + +V GD F ++P+ A+ K +L NW+D+ CL+ILK C
Sbjct: 213 LKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVLLKYILHNWTDKDCLRILKKCK 272
Query: 261 DALPKSRKHGRTQLRSKRGLPESPEFSSINRNILTLDIVMYDLFPQAKGRTAGEFKALAM 320
+A+ K G+ + + + + + + + L D+ L K R E+K L +
Sbjct: 273 EAVTNDGKRGKVTIIDXV-IDKKKDENQVTQIKLLXDVNXACL--NGKERNEEEWKKLFI 329
Query: 321 AAGFGTIKVICRSYCYWVIEFY 342
AGF K+ + +IE Y
Sbjct: 330 EAGFQHYKISPLTGFLSLIEIY 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 6 GLHLFDYASKDARLQNLFNQSMHNHTAI----------GFEELNELVDVAGGLGVNMSLI 55
G +D+ K+ FN + + + + F+ L +VDV GG G +I
Sbjct: 147 GSGFWDFLDKNPEYNTSFNDAXASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKII 206
Query: 56 VNTYSQIRGINFDLPHVIENASSS 79
T+ +++ I FD P V+EN S S
Sbjct: 207 CETFPKLKCIVFDRPQVVENLSGS 230
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 170 ILEIYKGFKELKKLVDVASCLGANMSLIVNTYPQITGINFDLPYVIK----NAPCVEH-- 223
IL F + DV G + ++ +P + G+ D V+ +AP V
Sbjct: 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRW 234
Query: 224 --VEGDMFVNVPSGQAIFTKSVLLNWSDEQCLKILKNCYDALPKSRKHGR 271
VEGD VP K +L NW DE ++IL NC P HGR
Sbjct: 235 KVVEGDFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVXP---AHGR 281
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 221 VEHVEGDMFVNVP-SGQAIFTKSVLLNWSDEQCLKILKNCYDALPKSRKHGRTQLRSKRG 279
V+ VEGD F +P AI VLLNW D ++IL C +AL GR + +
Sbjct: 235 VDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG---GRILIHERDD 291
Query: 280 LPESPEFSSINRNILTLDIVMYDLFPQAKGRTAGEFKALAMAAGF 324
L E +S N LD+ M +F RT ++ LA +AG
Sbjct: 292 LHE----NSFNEQFTELDLRML-VFLGGALRTREKWDGLAASAGL 331
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 177 FKELKKLVDVASCLGANMSLIVNTYPQITGINFDLPYVIKNA----------PCVEHVEG 226
+ ++ ++DV G ++ I P + G +L + A V EG
Sbjct: 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEG 239
Query: 227 DMFVNVP-SGQAIFTKSVLLNWSDEQCLKILKNCYDAL-PKSR 267
D F +P + + VLLNWSDE L IL+ C AL P R
Sbjct: 240 DFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGR 282
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 224 VEGDMFVNVP-SGQAIFTKSVLLNWSDEQCLKILKNCYDAL-PKSR 267
EGD F +P + + VLLNWSDE L IL+ C AL P R
Sbjct: 237 AEGDFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGR 282
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 5 NGLHLFDYASKDARLQNLFNQSMHN---------HTAIGFEELNELVDVAGGLGVNMSLI 55
NG + +D + + LFN++ + A F VD+ GG G + +
Sbjct: 161 NGTSFWQLTHEDPKARELFNRAXGSVSLTEAGQVAAAYDFSGAATAVDIGGGRGSLXAAV 220
Query: 56 VNTYSQIRGINFDLPHVIENASSSPVSRNIS 86
++ + +RG + P V E A R ++
Sbjct: 221 LDAFPGLRGTLLERPPVAEEARELLTGRGLA 251
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 11/94 (11%)
Query: 181 KKLVDVASCLGANMSLIVNTYPQITGINFDLPYVIKNA----------PCVEHVEGDMFV 230
+ VDV G I+ P G+ D + A V V GDM
Sbjct: 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ 228
Query: 231 NVPSGQAIFTKSVLLNWSDEQC-LKILKNCYDAL 263
VPS I+ S ++ DE L++L NC +A+
Sbjct: 229 EVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAM 262
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 153 NLFNQSMQNHTAIVMKKILEIYKGFKELKKLVDVASCLGANMSLIVNTYPQITGINFDLP 212
NL+ + + A ++L +KK++DV +G + ++ +P++ +LP
Sbjct: 164 NLYFEEIHRSNAKFAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLP 223
Query: 213 YVIK--NAPCVEHVEGDMFVNV---------PSGQAIFTKSVLLNWSDEQCLKILKNCYD 261
I N E D + P A+ +L + +++ + K +D
Sbjct: 224 GAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFD 283
Query: 262 ALPKSRKHGRTQ-LRSKRGLPESPEFSSINRNILTLDIVMYDLFPQAKGRTAGEFKALAM 320
A+ R GR L PE+P F ++ IL + L + + R +K +
Sbjct: 284 AM---RSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQAR----YKEILE 336
Query: 321 AAGFGTIKVICRSYCYWVIEFYKP 344
+ G+ + ++ R Y + +++ KP
Sbjct: 337 SLGYKDVTMV-RKYDHLLVQAVKP 359
>pdb|3MCZ|A Chain A, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis.
pdb|3MCZ|B Chain B, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis
Length = 352
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 177 FKELKKLVDVASCLGANMSLIVNTYPQITGINFDLP 212
F + ++D+A G ++ ++ +PQ+TG +DLP
Sbjct: 177 FARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLP 212
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 35 FEELNELVDVAGGLGVNMSLIVNTYSQIRGINFDLPHVIENASSS 79
F ++D+AGG G ++ ++ + Q+ G +DLP + A +
Sbjct: 177 FARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKT 221
>pdb|3OTT|A Chain A, Crystal Structure Of The Extracellular Domain Of The
Putative One Component System Bt4673 From B.
Thetaiotaomicron
pdb|3OTT|B Chain B, Crystal Structure Of The Extracellular Domain Of The
Putative One Component System Bt4673 From B.
Thetaiotaomicron
Length = 758
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 5 NGLHLFDYASKDARLQNLFNQSMHNHTAIGFEELNELVDVAG--GLGVNMSLIVNTYSQI 62
NGL + D + DAR QN+ N+ T++ F+ + V + G G G++ S + TY
Sbjct: 577 NGLWIIDRKTMDARQQNMTNKRF---TSLLFDPKEDCVYLGGADGFGISHSNLEATYQPE 633
Query: 63 RGINFDLPHVIENASSSPVSRN 84
R I + I N SP +R+
Sbjct: 634 RPILLTALY-INNQLVSPRTRD 654
>pdb|3VA6|A Chain A, Crystal Structure Of The Extracellular Domain Of The
Putative Hybrid Two Component System Bt4673 From B.
Thetaiotaomicron
pdb|3VA6|B Chain B, Crystal Structure Of The Extracellular Domain Of The
Putative Hybrid Two Component System Bt4673 From B.
Thetaiotaomicron
Length = 758
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 5 NGLHLFDYASKDARLQNLFNQSMHNHTAIGFEELNELVDVAG--GLGVNMSLIVNTYSQI 62
NGL + D + DAR QN+ N+ T++ F+ + V + G G G++ S + TY
Sbjct: 577 NGLWIIDRKTMDARQQNMTNKRF---TSLLFDPKEDCVYLGGADGFGISHSNLEATYQPE 633
Query: 63 RGINFDLPHVIENASSSPVSRN 84
R I + I N SP +R+
Sbjct: 634 RPILLTALY-INNQLVSPRTRD 654
>pdb|2WV7|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 329
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 35 FEELNELVD-VAGGLGVNMSLIVNTYSQIRGINFDLPHV------IENASSSPVSRNIST 87
F NE +D VA G+G+ + + + Y+++ G PHV I N + R++S
Sbjct: 218 FTNTNEEIDIVAPGVGIKSTYLDSGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSE 277
Query: 88 IDVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICR 124
++ + + T F A A G GF T+ ++ R
Sbjct: 278 TEIYAQLV----RRATPIGFTAQAEGNGFLTLDLVER 310
>pdb|2X8J|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 327
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 35 FEELNELVD-VAGGLGVNMSLIVNTYSQIRGINFDLPHV------IENASSSPVSRNIST 87
F NE +D VA G+G+ + + + Y+++ G PHV I N + R++S
Sbjct: 218 FTNTNEEIDIVAPGVGIKSTYLDSGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSE 277
Query: 88 IDVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICR 124
++ + + T F A A G GF T+ ++ R
Sbjct: 278 TEIYAQLV----RRATPIGFTAQAEGNGFLTLDLVER 310
>pdb|2X8J|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
Length = 327
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 35 FEELNELVD-VAGGLGVNMSLIVNTYSQIRGINFDLPHV------IENASSSPVSRNIST 87
F NE +D VA G+G+ + + + Y+++ G PHV I N + R++S
Sbjct: 218 FTNTNEEIDIVAPGVGIKSTYLDSGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSE 277
Query: 88 IDVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICR 124
++ + + T F A A G GF T+ ++ R
Sbjct: 278 TEIYAQLV----RRATPIGFTAQAEGNGFLTLDLVER 310
>pdb|2XRM|A Chain A, Processed Intracellular Subtilisin From B. Clausii
Length = 311
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 35 FEELNELVD-VAGGLGVNMSLIVNTYSQIRGINFDLPHV------IENASSSPVSRNIST 87
F NE +D VA G+G+ + + + Y+++ G PHV I N + R++S
Sbjct: 200 FTNTNEEIDIVAPGVGIKSTYLDSGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSE 259
Query: 88 IDVVMYNLFPGAKERTMEEFNALAIGAGFGTIKVICR 124
++ + + T F A A G GF T+ ++ R
Sbjct: 260 TEIYAQLV----RRATPIGFTAQAEGNGFLTLDLVER 292
>pdb|3VDH|A Chain A, Crystal Structure Of A Putative Beta-1,4-Endoglucanase
CELLULASE From Prevotella Bryantii
pdb|3VDH|B Chain B, Crystal Structure Of A Putative Beta-1,4-Endoglucanase
CELLULASE From Prevotella Bryantii
Length = 353
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 32 AIGFEELN-------ELVDVAGGLGVNMSLIVNTYSQIRGI----NFDLP 70
A G+E LN + V GG +LIVNTY+ +G NF LP
Sbjct: 176 ASGYEALNNYAQDFVDAVRATGGNNATRNLIVNTYAAAKGENVLNNFXLP 225
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 224 VEGDMFVNVPSGQAIFTKS-VLLNWSDEQCLKILKNCYDA 262
V G F +P+G + S VL +W D + IL+ C +A
Sbjct: 224 VVGSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEA 263
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,937,518
Number of Sequences: 62578
Number of extensions: 396597
Number of successful extensions: 1182
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1113
Number of HSP's gapped (non-prelim): 59
length of query: 345
length of database: 14,973,337
effective HSP length: 100
effective length of query: 245
effective length of database: 8,715,537
effective search space: 2135306565
effective search space used: 2135306565
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.6 bits)