Query 044483
Match_columns 235
No_of_seqs 146 out of 2009
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 05:50:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044483.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044483hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b93_B Ankyrin repeat domain-c 100.0 7E-31 2.4E-35 224.1 12.7 162 25-209 68-230 (269)
2 4gpm_A Engineered protein OR26 100.0 7.3E-30 2.5E-34 203.9 16.3 145 44-211 6-150 (169)
3 3b7b_A Euchromatic histone-lys 100.0 4E-29 1.4E-33 206.5 13.9 196 4-227 22-234 (237)
4 1yyh_A HN1;, notch 1, ankyrin 100.0 1.8E-28 6.1E-33 205.8 17.9 187 3-211 33-237 (253)
5 2rfm_A Putative ankyrin repeat 100.0 1.1E-28 3.9E-33 198.4 14.2 151 37-210 30-180 (192)
6 2f8y_A Notch homolog 1, transl 100.0 7.5E-28 2.6E-32 197.1 18.4 151 38-210 54-204 (223)
7 3v31_A Ankyrin repeat family A 100.0 2.6E-28 8.9E-33 191.9 14.9 147 41-210 2-148 (167)
8 2rfa_A Transient receptor pote 100.0 1.5E-28 5E-33 202.7 13.9 167 38-210 33-210 (232)
9 2dzn_A Probable 26S proteasome 100.0 6.2E-28 2.1E-32 197.9 17.6 173 4-210 13-187 (228)
10 1oy3_D Transcription factor in 100.0 6.6E-29 2.3E-33 209.4 11.5 178 4-210 20-238 (282)
11 3hra_A Ankyrin repeat family p 100.0 8.7E-28 3E-32 193.7 17.3 151 38-210 35-191 (201)
12 2f8y_A Notch homolog 1, transl 100.0 5.9E-28 2E-32 197.7 16.0 168 21-210 2-171 (223)
13 2rfa_A Transient receptor pote 100.0 4.9E-28 1.7E-32 199.5 15.4 152 41-210 2-167 (232)
14 3v30_A DNA-binding protein rfx 100.0 5.3E-28 1.8E-32 191.0 14.6 147 42-210 2-148 (172)
15 1awc_B Protein (GA binding pro 100.0 6.6E-28 2.3E-32 187.4 14.9 145 42-210 2-146 (153)
16 3aji_A 26S proteasome non-ATPa 100.0 1.2E-27 4.1E-32 196.9 16.7 168 5-210 18-185 (231)
17 1ikn_D Protein (I-kappa-B-alph 100.0 1.9E-28 6.4E-33 203.0 11.4 175 19-210 17-197 (236)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 5.1E-28 1.8E-32 203.0 13.9 169 20-210 33-203 (253)
19 2etb_A Transient receptor pote 100.0 5.4E-28 1.8E-32 202.6 14.0 164 38-211 39-235 (256)
20 2xai_A ASB-9, ankyrin repeat a 100.0 2.6E-27 8.8E-32 199.8 17.1 181 4-209 14-211 (261)
21 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.5E-27 5E-32 185.4 14.1 145 42-210 2-146 (156)
22 3jxi_A Vanilloid receptor-rela 100.0 1.6E-27 5.5E-32 199.9 15.3 167 39-210 43-238 (260)
23 3aji_A 26S proteasome non-ATPa 100.0 1.9E-27 6.7E-32 195.6 15.2 150 38-210 69-218 (231)
24 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.9E-27 9.9E-32 186.8 15.5 148 40-210 12-159 (169)
25 1ihb_A P18-INK4C(INK6), cyclin 99.9 2E-27 6.7E-32 185.5 14.2 148 41-211 4-151 (162)
26 4hbd_A KN motif and ankyrin re 99.9 1E-27 3.4E-32 204.7 13.6 157 35-211 104-264 (276)
27 1k1a_A B-cell lymphoma 3-encod 99.9 2.9E-28 9.8E-33 201.3 9.7 114 80-209 115-228 (241)
28 3twr_A Tankyrase-2; ankyrin re 99.9 7.7E-28 2.6E-32 188.8 11.6 149 39-210 5-153 (165)
29 1oy3_D Transcription factor in 99.9 2E-27 6.7E-32 200.4 14.6 155 37-210 4-205 (282)
30 1sw6_A Regulatory protein SWI6 99.9 2.7E-28 9.2E-33 213.0 9.4 162 26-208 113-327 (327)
31 3ljn_A Hypothetical protein; a 99.9 2.7E-27 9.3E-32 208.1 15.2 189 4-210 31-257 (364)
32 2dzn_A Probable 26S proteasome 99.9 7E-27 2.4E-31 191.6 16.1 150 42-210 2-153 (228)
33 1k1a_A B-cell lymphoma 3-encod 99.9 2.8E-27 9.7E-32 195.3 13.4 154 38-210 42-196 (241)
34 2xai_A ASB-9, ankyrin repeat a 99.9 7.5E-27 2.5E-31 196.9 16.0 150 36-210 30-179 (261)
35 3d9h_A CDNA FLJ77766, highly s 99.9 1.2E-26 3.9E-31 198.7 17.2 146 40-210 90-235 (285)
36 3kea_A K1L; tropism, ANK repea 99.9 1.2E-26 4.2E-31 198.6 17.3 146 41-210 61-208 (285)
37 3ljn_A Hypothetical protein; a 99.9 9.2E-27 3.1E-31 204.7 16.6 180 18-210 28-224 (364)
38 1n11_A Ankyrin; clathrin, BAND 99.9 8.3E-27 2.8E-31 209.5 16.0 148 40-210 243-390 (437)
39 4b93_B Ankyrin repeat domain-c 99.9 6.6E-27 2.3E-31 199.4 14.4 146 42-210 52-198 (269)
40 1s70_B 130 kDa myosin-binding 99.9 6.5E-27 2.2E-31 199.5 14.3 153 38-206 69-274 (299)
41 2pnn_A Transient receptor pote 99.9 9E-27 3.1E-31 197.1 15.0 168 38-210 50-246 (273)
42 3b7b_A Euchromatic histone-lys 99.9 2.1E-26 7.1E-31 190.1 16.4 170 20-211 21-191 (237)
43 3f6q_A Integrin-linked protein 99.9 3.2E-27 1.1E-31 188.0 10.5 148 41-210 4-151 (179)
44 3d9h_A CDNA FLJ77766, highly s 99.9 3E-26 1E-30 196.1 16.9 151 36-210 53-203 (285)
45 1n11_A Ankyrin; clathrin, BAND 99.9 3.1E-26 1E-30 205.8 17.6 149 39-210 209-357 (437)
46 3utm_A Tankyrase-1; tankyrase, 99.9 4.4E-26 1.5E-30 197.3 17.9 173 22-210 70-293 (351)
47 3hra_A Ankyrin repeat family p 99.9 3E-26 1E-30 184.6 15.7 150 40-209 3-152 (201)
48 4gpm_A Engineered protein OR26 99.9 1.1E-26 3.8E-31 185.3 12.5 130 37-184 32-161 (169)
49 3kea_A K1L; tropism, ANK repea 99.9 2.6E-27 9E-32 202.8 8.8 147 37-210 26-174 (285)
50 2fo1_E LIN-12 protein; beta-ba 99.9 4.6E-26 1.6E-30 202.1 16.4 164 38-211 195-360 (373)
51 1wdy_A 2-5A-dependent ribonucl 99.9 1.1E-25 3.8E-30 189.1 17.2 151 39-211 102-267 (285)
52 2etb_A Transient receptor pote 99.9 1.8E-26 6.1E-31 193.3 12.2 152 42-208 2-183 (256)
53 1s70_B 130 kDa myosin-binding 99.9 5.7E-26 1.9E-30 193.7 15.4 149 39-210 37-245 (299)
54 1wdy_A 2-5A-dependent ribonucl 99.9 2.1E-25 7.3E-30 187.4 18.5 192 4-210 16-232 (285)
55 2pnn_A Transient receptor pote 99.9 1.2E-26 4.1E-31 196.3 10.7 163 37-210 8-197 (273)
56 1ikn_D Protein (I-kappa-B-alph 99.9 3.9E-27 1.3E-31 195.0 6.9 155 38-210 4-164 (236)
57 2vge_A RELA-associated inhibit 99.9 6.8E-27 2.3E-31 194.7 5.9 155 38-210 17-201 (229)
58 3v30_A DNA-binding protein rfx 99.9 3.3E-25 1.1E-29 174.9 15.2 159 4-200 13-171 (172)
59 3eu9_A Huntingtin-interacting 99.9 4.6E-25 1.6E-29 181.1 16.4 184 4-210 20-223 (240)
60 3utm_A Tankyrase-1; tankyrase, 99.9 3.3E-25 1.1E-29 191.8 15.9 167 21-210 35-260 (351)
61 2fo1_E LIN-12 protein; beta-ba 99.9 1E-25 3.6E-30 199.8 12.8 157 35-210 159-326 (373)
62 3eu9_A Huntingtin-interacting 99.9 7E-25 2.4E-29 180.1 16.5 169 20-210 19-190 (240)
63 3jxi_A Vanilloid receptor-rela 99.9 7.5E-26 2.6E-30 189.7 10.8 156 40-210 3-189 (260)
64 1ycs_B 53BP2, P53BP2; ankyrin 99.9 9.2E-26 3.1E-30 188.2 9.9 148 40-211 3-153 (239)
65 1bi7_B P16INK4A, MTS1, multipl 99.9 2E-25 6.8E-30 174.2 10.9 144 38-205 8-152 (156)
66 4g8k_A 2-5A-dependent ribonucl 99.9 1.3E-24 4.5E-29 189.0 17.2 165 41-211 58-287 (337)
67 1d9s_A Cyclin-dependent kinase 99.9 1.9E-24 6.4E-29 164.9 13.1 129 36-183 6-135 (136)
68 3t8k_A Uncharacterized protein 99.9 1.4E-25 4.7E-30 181.6 6.9 147 42-210 6-167 (186)
69 4g8k_A 2-5A-dependent ribonucl 99.9 9.7E-24 3.3E-28 183.5 18.1 149 38-211 164-315 (337)
70 1ihb_A P18-INK4C(INK6), cyclin 99.9 4E-24 1.4E-28 166.6 13.0 128 38-183 34-161 (162)
71 1ycs_B 53BP2, P53BP2; ankyrin 99.9 7.5E-25 2.6E-29 182.6 7.8 174 19-210 14-194 (239)
72 1awc_B Protein (GA binding pro 99.9 7.8E-24 2.7E-28 164.2 11.6 140 4-178 13-152 (153)
73 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.2E-23 1.5E-27 162.8 15.9 144 4-181 25-168 (169)
74 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.5E-23 1.2E-27 154.0 13.6 125 41-183 1-125 (126)
75 3v31_A Ankyrin repeat family A 99.9 7.5E-23 2.6E-27 160.6 15.6 146 4-183 14-159 (167)
76 2jab_A H10-2-G3; HER2, darpin, 99.9 2.7E-23 9.1E-28 158.5 12.3 125 39-181 11-135 (136)
77 3f6q_A Integrin-linked protein 99.9 2.7E-23 9.3E-28 165.2 12.4 156 4-197 16-171 (179)
78 2rfm_A Putative ankyrin repeat 99.9 1.5E-23 5E-28 168.4 10.2 144 21-182 46-190 (192)
79 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3.2E-23 1.1E-27 160.8 11.3 124 38-181 32-155 (156)
80 1d9s_A Cyclin-dependent kinase 99.9 1.6E-23 5.5E-28 159.7 9.4 117 76-210 7-124 (136)
81 4hbd_A KN motif and ankyrin re 99.9 1.2E-23 4.2E-28 179.3 9.0 150 42-211 76-230 (276)
82 3twr_A Tankyrase-2; ankyrin re 99.9 3.2E-23 1.1E-27 162.4 10.2 126 39-183 39-164 (165)
83 2b0o_E UPLC1; arfgap, structur 99.9 2.7E-23 9.4E-28 179.9 10.8 148 42-210 151-299 (301)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 4.7E-23 1.6E-27 157.1 10.8 116 78-210 11-126 (136)
85 3aaa_C Myotrophin, protein V-1 99.9 4.8E-23 1.6E-27 154.3 8.7 113 79-208 5-117 (123)
86 3c5r_A BARD-1, BRCA1-associate 99.9 4.3E-23 1.5E-27 157.1 8.5 117 77-210 6-122 (137)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.8E-22 9.5E-27 149.0 12.6 114 80-210 1-114 (126)
88 1sw6_A Regulatory protein SWI6 99.9 6.1E-23 2.1E-27 179.0 7.7 151 43-210 98-296 (327)
89 1bi7_B P16INK4A, MTS1, multipl 99.9 1.9E-22 6.5E-27 157.2 8.6 117 77-211 8-125 (156)
90 3deo_A Signal recognition part 99.9 1.8E-22 6.1E-27 161.5 7.9 116 79-212 42-158 (183)
91 3c5r_A BARD-1, BRCA1-associate 99.9 1.3E-22 4.4E-27 154.5 5.9 128 37-182 5-132 (137)
92 3ui2_A Signal recognition part 99.9 4.5E-22 1.6E-26 166.6 9.6 131 40-210 43-173 (244)
93 2aja_A Ankyrin repeat family p 99.9 2.3E-23 7.8E-28 186.0 1.6 148 39-211 89-239 (376)
94 3ehr_A Osteoclast-stimulating 99.9 3.6E-22 1.2E-26 164.0 7.5 113 80-209 72-185 (222)
95 3deo_A Signal recognition part 99.9 9.5E-22 3.2E-26 157.3 9.5 131 40-210 42-172 (183)
96 3ehr_A Osteoclast-stimulating 99.9 6.2E-22 2.1E-26 162.5 7.4 121 41-184 72-198 (222)
97 3aaa_C Myotrophin, protein V-1 99.8 1.4E-21 4.9E-26 146.2 8.2 113 40-170 5-117 (123)
98 1dcq_A PYK2-associated protein 99.8 1.3E-21 4.4E-26 167.5 9.0 132 42-183 130-262 (278)
99 3ui2_A Signal recognition part 99.8 1.7E-21 5.9E-26 163.1 9.0 144 41-211 14-158 (244)
100 3t8k_A Uncharacterized protein 99.8 1.6E-21 5.6E-26 157.5 8.2 127 40-182 36-177 (186)
101 2vge_A RELA-associated inhibit 99.8 1E-21 3.5E-26 163.4 7.1 116 78-210 18-136 (229)
102 3jue_A Arfgap with coiled-coil 99.8 3.2E-20 1.1E-24 165.2 12.7 151 40-210 197-350 (368)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.7E-20 9.2E-25 132.7 9.7 81 123-211 2-82 (93)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.3E-20 2.5E-24 130.4 10.4 92 80-183 1-92 (93)
105 3lvq_E ARF-GAP with SH3 domain 99.8 6.2E-20 2.1E-24 168.8 12.4 142 42-206 132-276 (497)
106 1dcq_A PYK2-associated protein 99.8 2.2E-19 7.5E-24 153.6 12.2 160 40-210 64-251 (278)
107 2aja_A Ankyrin repeat family p 99.8 1.3E-20 4.6E-25 168.1 2.2 145 42-211 65-213 (376)
108 3jue_A Arfgap with coiled-coil 99.8 4.6E-19 1.6E-23 157.7 11.8 115 81-210 199-314 (368)
109 2l6b_A NR1C; ankyrin, consensu 99.8 9.3E-20 3.2E-24 134.5 5.9 108 77-201 5-112 (115)
110 2b0o_E UPLC1; arfgap, structur 99.8 5.8E-19 2E-23 152.7 11.4 118 82-210 152-272 (301)
111 3lvq_E ARF-GAP with SH3 domain 99.8 5.7E-19 1.9E-23 162.4 11.4 118 82-210 133-253 (497)
112 2zgd_A 3 repeat synthetic anky 99.8 3E-18 1E-22 126.1 8.8 81 122-210 23-103 (110)
113 2l6b_A NR1C; ankyrin, consensu 99.7 3.4E-18 1.2E-22 126.0 7.2 110 36-163 3-112 (115)
114 2zgd_A 3 repeat synthetic anky 99.7 5.9E-17 2E-21 119.1 8.5 90 77-178 20-109 (110)
115 1gp8_A Protein (scaffolding pr 21.3 67 0.0023 18.3 2.2 20 125-144 15-34 (40)
No 1
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=7e-31 Score=224.06 Aligned_cols=162 Identities=15% Similarity=0.170 Sum_probs=134.5
Q ss_pred cccccCCCc-cccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHH
Q 044483 25 NLEIFSPNP-ESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFV 103 (235)
Q Consensus 25 ~~~~l~~~~-~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll 103 (235)
.++.|+..+ +.+..+.+|+||||+|+..|+.+++++|++.+++ ....+..|.||+|+|+..++. +++++|+
T Consensus 68 ~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~------~~~~~~~g~t~l~~a~~~~~~--~~~~~Ll 139 (269)
T 4b93_B 68 RLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGAN------AGARNADQAVPLHLACQQGHF--QVVKCLL 139 (269)
T ss_dssp -------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC------TTCCCTTCCCHHHHHHHHTCH--HHHHHHH
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC------cCccCCCCCCccccccccChH--HHHHHHH
Confidence 344444322 3344556799999999999999999999988762 234467789999999999987 9999999
Q ss_pred hcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhcc
Q 044483 104 KKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMR 183 (235)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~ 183 (235)
+.+++.+. .+..|+||||+||..|+.++|++|++.++++ +.+|..|+||||+|+..|+.++|++|++.++
T Consensus 140 ~~g~~~n~-------~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv---n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga 209 (269)
T 4b93_B 140 DSNAKPNK-------KDLSGNTPLIYACSGGHHELVALLLQHGASI---NASNNKGNTALHEAVIEKHVFVVELLLLHGA 209 (269)
T ss_dssp HTTCCSCC-------CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT---TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HCCCCCCC-------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC---CccccCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 98876542 2334899999999999999999999998876 8999999999999999999999999999876
Q ss_pred ccccccccCCCCCCCcHHHHHHhCCC
Q 044483 184 LSVPKWASRIDKKGYTLLHHVADMKH 209 (235)
Q Consensus 184 ~~~~~~~~~~d~~G~TpLHlAa~~g~ 209 (235)
+ ++.+|.+|+||||+|+++|+
T Consensus 210 d-----~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 210 S-----VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp C-----SCCCCTTSCCSGGGSCTTCH
T ss_pred C-----CCCcCCCCCCHHHHHHhCCc
Confidence 4 99999999999999999887
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=7.3e-30 Score=203.85 Aligned_cols=145 Identities=19% Similarity=0.224 Sum_probs=129.7
Q ss_pred hHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCc
Q 044483 44 SIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAF 123 (235)
Q Consensus 44 t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g 123 (235)
++|+.||+.|+.++++.|++.+++ .+..+..|.||||+|+..+.. +++++|++.+++... .+..|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad------vn~~d~~g~t~l~~a~~~~~~--~~~~~ll~~gad~~~-------~d~~g 70 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD------VNASDSDGRTPLHHAAENGHK--EVVKLLISKGADVNA-------KDSDG 70 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-------CCTTS
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHcCCH--HHHHHHHhcccchhh-------hccCC
Confidence 579999999999999999998872 345577899999999999987 999999998876542 23359
Q ss_pred chHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHH
Q 044483 124 RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHH 203 (235)
Q Consensus 124 ~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHl 203 (235)
+||||+||..|+.++|++|++.++++ +.+|.+|+||||+|+..|+.++|++|++.+++ ++.+|.+|+||||+
T Consensus 71 ~TpLh~A~~~g~~~~v~~Ll~~gadv---n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-----~~~~d~~G~TpL~~ 142 (169)
T 4gpm_A 71 RTPLHHAAENGHKEVVKLLISKGADV---NAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-----VNTSDSDGRTPLDL 142 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCcCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----ccccCCCCCCHHHH
Confidence 99999999999999999999998886 89999999999999999999999999998764 89999999999999
Q ss_pred HHhCCCCC
Q 044483 204 VADMKHYK 211 (235)
Q Consensus 204 Aa~~g~~~ 211 (235)
|++.|+.+
T Consensus 143 A~~~g~~~ 150 (169)
T 4gpm_A 143 AREHGNEE 150 (169)
T ss_dssp HHHTTCHH
T ss_pred HHHcCCHH
Confidence 99999974
No 3
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=4e-29 Score=206.47 Aligned_cols=196 Identities=15% Similarity=0.160 Sum_probs=143.6
Q ss_pred cHHHHHHHHHhhCCCCC----------------CccccccccCCCc-cccCCCCCCchHHHHHHhcCcHHHHHHHHhhCh
Q 044483 4 NADKLLKMLVKETPCLG----------------DGEQNLEIFSPNP-ESSTTSSDKISIISLGLGKGNMLKAKKLVDFSA 66 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~-~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~ 66 (235)
+.-++|++|++....+. +..+.++.|+..+ .....+..|.||||.|+..|+.++++.|++.++
T Consensus 22 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 101 (237)
T 3b7b_A 22 GHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ 101 (237)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred CcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 34578899998753221 2334445555432 223344558888888888888888888887763
Q ss_pred hhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhC
Q 044483 67 GELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQH 146 (235)
Q Consensus 67 ~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~ 146 (235)
...+..+..|.||||+|+..++. +++++|++.++.... .+..|.||||+|+..|+.+++++|++.+
T Consensus 102 -----~~~~~~~~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 167 (237)
T 3b7b_A 102 -----MDVNCQDDGGWTPMIWATEYKHV--DLVKLLLSKGSDINI-------RDNEENICLHWAAFSGCVDIAEILLAAK 167 (237)
T ss_dssp -----CCTTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHHCCHHHHHHHHTTT
T ss_pred -----CCcccCCCCCCCHHHHHHHcCCH--HHHHHHHHCCCCCCc-------cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 12233456778899988888866 889988887765431 2234889999999999999999999887
Q ss_pred CCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCCCCCCCCChHHhhHHHH
Q 044483 147 PQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEEL 226 (235)
Q Consensus 147 ~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~~~~~~~~~~~~~~~~~ 226 (235)
++. +.+|..|.||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|+..|+. ..++|+.+++
T Consensus 168 ~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-----~~~~d~~g~t~l~~A~~~~~~------~~~~~l~~~l 233 (237)
T 3b7b_A 168 CDL---HAVNIHGDSPLHIAARENRYDCVVLFLSRDSD-----VTLKNKEGETPLQCASLNSQV------WSALQMSKAL 233 (237)
T ss_dssp CCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----TTCCCTTSCCHHHHSCTTCHH------HHHHHHHHHH
T ss_pred CCC---CCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC-----CCccCCCCCCHHHHHHHHHHH------HHHHHHHHHh
Confidence 775 78888899999999999999999999987654 888889999999999888875 2567777766
Q ss_pred H
Q 044483 227 Q 227 (235)
Q Consensus 227 ~ 227 (235)
+
T Consensus 234 ~ 234 (237)
T 3b7b_A 234 Q 234 (237)
T ss_dssp H
T ss_pred h
Confidence 4
No 4
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=1.8e-28 Score=205.81 Aligned_cols=187 Identities=9% Similarity=0.076 Sum_probs=134.6
Q ss_pred CcHHHHHHHHHhhCCCCC-----------------CccccccccCCCc-cccCCCCCCchHHHHHHhcCcHHHHHHHHhh
Q 044483 3 RNADKLLKMLVKETPCLG-----------------DGEQNLEIFSPNP-ESSTTSSDKISIISLGLGKGNMLKAKKLVDF 64 (235)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~~~-~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~ 64 (235)
.+..++|++|++..+.+. +..+.++.|+..+ .....+..|.||||.|+..|+.++++.|++.
T Consensus 33 ~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 112 (253)
T 1yyh_A 33 EDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 112 (253)
T ss_dssp -------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHS
T ss_pred CCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 455677888887654332 2333445554322 2333445688888888888888888888877
Q ss_pred ChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHH
Q 044483 65 SAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIH 144 (235)
Q Consensus 65 ~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~ 144 (235)
++ ......+..|.||||+|+..++. +++++|++.++.... .+..|+||||+|+..|+.+++++|++
T Consensus 113 ~~-----~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~d~~g~t~L~~A~~~~~~~~v~~Ll~ 178 (253)
T 1yyh_A 113 RA-----TDLDARMHDGTTPLILAARLAVE--GMLEDLINSHADVNA-------VDDLGKSALHWAAAVNNVDAAVVLLK 178 (253)
T ss_dssp TT-----SCTTCCCTTCCCHHHHHHHHTCS--SHHHHHHHTTCCTTC-------BCTTSCBHHHHHHHHTCHHHHHHHHH
T ss_pred CC-----CCccccCCCCCcHHHHHHHcChH--HHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 65 22334466788999999999988 999999997765432 22348999999999999999999999
Q ss_pred hCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCCC
Q 044483 145 QHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHYK 211 (235)
Q Consensus 145 ~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~~ 211 (235)
.+++. +.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|++.|+..
T Consensus 179 ~ga~~---~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~tpl~~A~~~g~~~ 237 (253)
T 1yyh_A 179 NGANK---DMQNNREETPLFLAAREGSYETAKVLLDHFAN-----RDITDHMDRLPRDIAQERMHHD 237 (253)
T ss_dssp TTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTCHH
T ss_pred cCCCC---CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-----ccccccCCCCHHHHHHHcCCHH
Confidence 88776 88999999999999999999999999998764 8899999999999999999963
No 5
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.1e-28 Score=198.40 Aligned_cols=151 Identities=13% Similarity=0.060 Sum_probs=132.1
Q ss_pred CCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcc
Q 044483 37 TTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYK 116 (235)
Q Consensus 37 ~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~ 116 (235)
..+..|+||||.|+..|+.++++.|++.+. ..+..+..|.||||+|+..++. +++++|++.++....
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~------~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~----- 96 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFD------KLEDKDIEGSTALIWAVKNNRL--GIAEKLLSKGSNVNT----- 96 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHC------CTTCCCTTSCCHHHHHHHTTCH--HHHHHHHHHTCCTTC-----
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhcc------ccccccccCccHHHHHHHcCCH--HHHHHHHHCCCCCCC-----
Confidence 455679999999999999999999998765 1234466789999999999977 999999998765431
Q ss_pred cccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCC
Q 044483 117 KDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKK 196 (235)
Q Consensus 117 ~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 196 (235)
.+..|.||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..
T Consensus 97 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~ 166 (192)
T 2rfm_A 97 --KDFSGKTPLMWSIIFGYSEMSYFLLEHGANV---NDRNLEGETPLIVASKYGRSEIVKKLLELGAD-----ISARDLT 166 (192)
T ss_dssp --CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS---SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCBCTT
T ss_pred --CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCcCCC
Confidence 2334899999999999999999999988776 89999999999999999999999999998754 8999999
Q ss_pred CCcHHHHHHhCCCC
Q 044483 197 GYTLLHHVADMKHY 210 (235)
Q Consensus 197 G~TpLHlAa~~g~~ 210 (235)
|+||||+|+..|+.
T Consensus 167 g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 167 GLTAEASARIFGRQ 180 (192)
T ss_dssp SCBHHHHHHHTTCH
T ss_pred CCCHHHHHHHhCcH
Confidence 99999999999986
No 6
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=7.5e-28 Score=197.07 Aligned_cols=151 Identities=10% Similarity=0.062 Sum_probs=123.9
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccc
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKK 117 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~ 117 (235)
.+..|.||||.|+..|+.++++.|++.++ ......+..|.||||+|+..++. +++++|++.++....
T Consensus 54 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~------ 120 (223)
T 2f8y_A 54 QDNMGRTPLHAAVSADAQGVFQILIRNRA-----TDLDARMHDGTTPLILAARLAVE--GMLEDLINSHADVNA------ 120 (223)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHBTT-----SCTTCCCTTCCCHHHHHHHHTCH--HHHHHHHHTTCCTTC------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCcccCCCCCCcHHHHHHHhCcH--HHHHHHHHcCCCCcC------
Confidence 44568899999999999999988888765 22344466788999999998877 999999987765431
Q ss_pred ccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCC
Q 044483 118 DKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKG 197 (235)
Q Consensus 118 ~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 197 (235)
.+..|+||||+|+..|+.+++++|++.+++. +.+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|
T Consensus 121 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g 191 (223)
T 2f8y_A 121 -VDDLGKSALHWAAAVNNVDAAVVLLKNGANK---DMQNNREETPLFLAAREGSYETAKVLLDHFAN-----RDITDHMD 191 (223)
T ss_dssp -BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTC
T ss_pred -cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-----CccccccC
Confidence 2234889999999999999999999987775 78889999999999999999999999988754 88889999
Q ss_pred CcHHHHHHhCCCC
Q 044483 198 YTLLHHVADMKHY 210 (235)
Q Consensus 198 ~TpLHlAa~~g~~ 210 (235)
.||||+|+..|+.
T Consensus 192 ~t~l~~A~~~~~~ 204 (223)
T 2f8y_A 192 RLPRDIAQERMHH 204 (223)
T ss_dssp CCHHHHHHHTTCH
T ss_pred CCHHHHHHHhcch
Confidence 9999999999986
No 7
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=2.6e-28 Score=191.90 Aligned_cols=147 Identities=12% Similarity=0.105 Sum_probs=130.2
Q ss_pred CCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccc
Q 044483 41 DKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKN 120 (235)
Q Consensus 41 ~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~ 120 (235)
.|.||||.|+..|+.++++.|++.+. ..+..+..|.||||+|+..++. +++++|++.++.... .+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~------~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~~ 66 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQEN------VINHTDEEGFTPLMWAAAHGQI--AVVEFLLQNGADPQL-------LG 66 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSS------CTTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-------CC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCC------CcCCCCCCCCCHHHHHHHCCCH--HHHHHHHHcCCCCCC-------cC
Confidence 47999999999999999999998876 2344567889999999999977 999999998765432 23
Q ss_pred cCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcH
Q 044483 121 WAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTL 200 (235)
Q Consensus 121 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 200 (235)
..|.||||+|+..|+.+++++|++.+++. +..|..|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~ 138 (167)
T 3v31_A 67 KGRESALSLACSKGYTDIVKMLLDCGVDV---NEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-----PTIETDSGYNS 138 (167)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCC---CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCH
Confidence 34899999999999999999999998876 89999999999999999999999999998754 88999999999
Q ss_pred HHHHHhCCCC
Q 044483 201 LHHVADMKHY 210 (235)
Q Consensus 201 LHlAa~~g~~ 210 (235)
||+|+..|+.
T Consensus 139 l~~A~~~~~~ 148 (167)
T 3v31_A 139 MDLAVALGYR 148 (167)
T ss_dssp HHHHHHHTCH
T ss_pred HHHHHHcCcH
Confidence 9999999986
No 8
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=1.5e-28 Score=202.71 Aligned_cols=167 Identities=12% Similarity=0.084 Sum_probs=132.2
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcc-
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYK- 116 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~- 116 (235)
.+.+|+||||+|+..|+.++++.|++.+++.... .....+..|.||||+|+..++. +++++|++.++.........
T Consensus 33 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~~~~~~~ 109 (232)
T 2rfa_A 33 RGAMGETALHIAALYDNLEAAMVLMEAAPELVFE-PMTSELYEGQTALHIAVINQNV--NLVRALLARGASVSARATGSV 109 (232)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC-CCCSTTTTTCCHHHHHHHTTCH--HHHHHHHHTTCCTTCCCCSGG
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccc-cccccCCCCcCHHHHHHHcCCH--HHHHHHHhCCCCCCcccCCcc
Confidence 4567999999999999999999999988732100 0022355789999999999977 99999999877654211000
Q ss_pred -----cccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHH----HHHHHhccccc-
Q 044483 117 -----KDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVF----ELIMKDMRLSV- 186 (235)
Q Consensus 117 -----~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv----~~Ll~~~~~~~- 186 (235)
...+..|.||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++ ++|++.+++..
T Consensus 110 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~ 186 (232)
T 2rfa_A 110 FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI---RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHL 186 (232)
T ss_dssp GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSS
T ss_pred eeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhh
Confidence 001224899999999999999999999998876 89999999999999999999988 99998876311
Q ss_pred cccccCCCCCCCcHHHHHHhCCCC
Q 044483 187 PKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 187 ~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
....+.+|..|+||||+|++.|+.
T Consensus 187 ~~~~~~~~~~g~tpl~~A~~~g~~ 210 (232)
T 2rfa_A 187 KSLELVPNNQGLTPFKLAGVEGNI 210 (232)
T ss_dssp CCGGGCCCTTSCCHHHHHHHHTCH
T ss_pred hhhhccCCCCCCCHHHHHHHcCCH
Confidence 111268999999999999999996
No 9
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=6.2e-28 Score=197.94 Aligned_cols=173 Identities=16% Similarity=0.021 Sum_probs=124.4
Q ss_pred cHHHHHHHHHhhCCCCCCccccccccCCCccccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCC
Q 044483 4 NADKLLKMLVKETPCLGDGEQNLEIFSPNPESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGN 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t 83 (235)
+.-++|++|++..+... ...+.+|.||||.|+..|+.++++.|++.+++. .+....+..|.|
T Consensus 13 g~~~~v~~Ll~~~~~~~---------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~~~~g~t 74 (228)
T 2dzn_A 13 NEFFKVQELLHSKPSLL---------------LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV---NLDDYPDDSGWT 74 (228)
T ss_dssp TCHHHHHHHHHHCGGGT---------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTC---CGGGCCCTTSCC
T ss_pred CCHHHHHHHHhcCcccc---------------ccCCCCCCCHHHHHHHcCCHHHHHHHHhccccc---cccccCCCCCCC
Confidence 44577888887754321 113456888888888888888888888876310 111113556778
Q ss_pred hhhHHHhcCCChHHHHHHHHhcC--CcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCCh
Q 044483 84 MIKAKKFVDFSAGELVELFVKKD--CTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQN 161 (235)
Q Consensus 84 ~Lh~A~~~~~~~~~iv~~Ll~~~--~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~t 161 (235)
|||+|+..++. +++++|++.+ .... ..+..|.||||+|+..|+.+++++|++.+.+. +.+|..|+|
T Consensus 75 ~L~~A~~~~~~--~~~~~Ll~~g~~~~~~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t 142 (228)
T 2dzn_A 75 PFHIACSVGNL--EVVKSLYDRPLKPDLN-------KITNQGVTCLHLAVGKKWFEVSQFLIENGASV---RIKDKFNQI 142 (228)
T ss_dssp HHHHHHHHCCH--HHHHHHHSSSSCCCTT-------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS---CCCCTTSCC
T ss_pred HHHHHHHcCCH--HHHHHHHhCCCCcccc-------cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc---cccCCCCCC
Confidence 88888888866 8888888765 3221 12234788888888888888888888877665 778888888
Q ss_pred HHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 162 ILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 162 pLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
|||+|+..|+.+++++|++.+. .+++.+|..|+||||+|+..|+.
T Consensus 143 ~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~d~~g~t~L~~A~~~~~~ 187 (228)
T 2dzn_A 143 PLHRAASVGSLKLIELLCGLGK----SAVNWQDKQGWTPLFHALAEGHG 187 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTC----CCSCCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHcCCHHHHHHHHhcCc----ccccCcCCCCCCHHHHHHHcCCH
Confidence 8888888888888888887762 23778888888888888888875
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=6.6e-29 Score=209.44 Aligned_cols=178 Identities=13% Similarity=0.043 Sum_probs=140.3
Q ss_pred cHHHHHHHHHhhCCCCCCccccccccCCCccccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCC
Q 044483 4 NADKLLKMLVKETPCLGDGEQNLEIFSPNPESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGN 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t 83 (235)
+.-++|++|++..+... .....+..|.||||+|+..|+.++++.|++.+++ .+..+..|.|
T Consensus 20 g~~~~v~~Ll~~g~~~~-------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~g~t 80 (282)
T 1oy3_D 20 QHEPFLDFLLGFSAGHE-------------YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG------VLVAERGGHT 80 (282)
T ss_dssp TCHHHHHHHHHHHTTSG-------------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------SSCCCTTSCC
T ss_pred CCHHHHHHHHhcCCCcc-------------cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCC
Confidence 34567777777543210 0223456799999999999999999999998872 2344678899
Q ss_pred hhhHHHhcCCChHHHHHHHHhcCCcchhhh----------------------------------------hcccccccCc
Q 044483 84 MIKAKKFVDFSAGELVELFVKKDCTNKAVH----------------------------------------NYKKDKNWAF 123 (235)
Q Consensus 84 ~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~----------------------------------------~~~~~~~~~g 123 (235)
|||+|+..++. +++++|++.++...... ..-...+..|
T Consensus 81 pL~~A~~~~~~--~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 81 ALHLACRVRAH--TCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp HHHHHTTTTCH--HHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred HHHHHHHcCCc--chhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 99999999977 99999998654311000 0001123459
Q ss_pred chHHHHHHHcCCHHHHHHHHHhCCCccccccCCC-CCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHH
Q 044483 124 RLTLLFAASNGITEILKEIIHQHPQAILLDNLNE-KEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLH 202 (235)
Q Consensus 124 ~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~-~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLH 202 (235)
.||||+|+..|+.+++++|++.+++. +..+. .|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-----~~~~d~~g~tpL~ 230 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDAGADL---NKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-----PTARMYGGRTPLG 230 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCT---TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHH
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-----CcccccCCCCHHH
Confidence 99999999999999999999998886 67765 499999999999999999999998764 9999999999999
Q ss_pred HHHhCCCC
Q 044483 203 HVADMKHY 210 (235)
Q Consensus 203 lAa~~g~~ 210 (235)
+|++.|+.
T Consensus 231 ~A~~~~~~ 238 (282)
T 1oy3_D 231 SALLRPNP 238 (282)
T ss_dssp HHHTSSCH
T ss_pred HHHHcCCc
Confidence 99999995
No 11
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=8.7e-28 Score=193.66 Aligned_cols=151 Identities=17% Similarity=0.132 Sum_probs=129.7
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHh-cCCcchhhhhcc
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVK-KDCTNKAVHNYK 116 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~-~~~~~~~~~~~~ 116 (235)
.+.+|.||||.|+..|+.++++.|++.+++ .+..+..|.||||+|+..++. +++++|++ .+....
T Consensus 35 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~--~~~~~Ll~~~~~~~~------ 100 (201)
T 3hra_A 35 VDTEGNTPLNIAVHNNDIEIAKALIDRGAD------INLQNSISDSPYLYAGAQGRT--EILAYMLKHATPDLN------ 100 (201)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHHSCCCTT------
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCH--HHHHHHHhccCcccc------
Confidence 345699999999999999999999998772 234567789999999999977 99999995 433322
Q ss_pred cccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCC-----HHHHHHHHHhcccccccccc
Q 044483 117 KDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQ-----YKVFELIMKDMRLSVPKWAS 191 (235)
Q Consensus 117 ~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~-----~~iv~~Ll~~~~~~~~~~~~ 191 (235)
..+..|.||||+|+..|+.+++++|++.++..+ +..|..|+||||+|+..++ .+++++|++.+++ ++
T Consensus 101 -~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~-----~~ 172 (201)
T 3hra_A 101 -KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDI--DFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD-----QS 172 (201)
T ss_dssp -CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCT--TCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC-----TT
T ss_pred -cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc--CCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCC-----CC
Confidence 123348999999999999999999999985555 8999999999999999998 9999999998764 89
Q ss_pred CCCCCCCcHHHHHHhCCCC
Q 044483 192 RIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 192 ~~d~~G~TpLHlAa~~g~~ 210 (235)
.+|..|+||||+|++.|+.
T Consensus 173 ~~~~~g~t~l~~A~~~~~~ 191 (201)
T 3hra_A 173 IKDNSGRTAMDYANQKGYT 191 (201)
T ss_dssp CCCTTSCCHHHHHHHHTCH
T ss_pred ccCCCCCCHHHHHHHcCCH
Confidence 9999999999999999986
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=5.9e-28 Score=197.69 Aligned_cols=168 Identities=15% Similarity=0.164 Sum_probs=139.0
Q ss_pred CccccccccCCCccccCC--CCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHH
Q 044483 21 DGEQNLEIFSPNPESSTT--SSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGEL 98 (235)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~--~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~i 98 (235)
+..+.++.|+........ +.+|.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..++. ++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~--~~ 73 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD------ANIQDNMGRTPLHAAVSADAQ--GV 73 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCH--HH
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCH--HH
Confidence 556777777765443322 46699999999999999999999988762 234467789999999999977 99
Q ss_pred HHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHH
Q 044483 99 VELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELI 178 (235)
Q Consensus 99 v~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~L 178 (235)
+++|++.+..... ..+..|.||||+|+..|+.+++++|++.+++. +..|..|+||||+|+..|+.+++++|
T Consensus 74 v~~Ll~~~~~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~L 144 (223)
T 2f8y_A 74 FQILIRNRATDLD------ARMHDGTTPLILAARLAVEGMLEDLINSHADV---NAVDDLGKSALHWAAAVNNVDAAVVL 144 (223)
T ss_dssp HHHHHHBTTSCTT------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT---TCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCCCcc------cCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC---cCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 9999997653321 12334899999999999999999999988776 88999999999999999999999999
Q ss_pred HHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 179 MKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 179 l~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
++.+.+ ++.+|..|+||||+|+..|+.
T Consensus 145 l~~g~~-----~~~~~~~g~t~L~~A~~~~~~ 171 (223)
T 2f8y_A 145 LKNGAN-----KDMQNNREETPLFLAAREGSY 171 (223)
T ss_dssp HHTTCC-----TTCCCTTCCCHHHHHHHHTCH
T ss_pred HHcCCC-----CCCcCCCCcCHHHHHHHcCCH
Confidence 998754 899999999999999999995
No 13
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=4.9e-28 Score=199.55 Aligned_cols=152 Identities=11% Similarity=0.059 Sum_probs=128.3
Q ss_pred CCchHHHHHHhcCcHHHHHHHHhh-ChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccc
Q 044483 41 DKISIISLGLGKGNMLKAKKLVDF-SAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDK 119 (235)
Q Consensus 41 ~G~t~Lh~A~~~g~~~~~~~ll~~-~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~ 119 (235)
.|+||||.|+..|+.++++.|++. +. ..+..+..|.||||+|+..|+. +++++|++.++..... .....
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~------~~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~--~~~~~ 71 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGC------EVHQRGAMGETALHIAALYDNL--EAAMVLMEAAPELVFE--PMTSE 71 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCS------CTTCCCTTSCCHHHHHHHTTCH--HHHHHHHHHCGGGGGC--CCCST
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCC------CcccCCCCCCCHHHHHHHcCCH--HHHHHHHHcCchhccc--ccccc
Confidence 589999999999999999999987 44 2344577899999999999977 9999999977654211 11122
Q ss_pred ccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCC-------------CCChHHHHHHHcCCHHHHHHHHHhccccc
Q 044483 120 NWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE-------------KEQNILHVSVKRRQYKVFELIMKDMRLSV 186 (235)
Q Consensus 120 ~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~-------------~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~ 186 (235)
+..|+||||+|+..|+.+++++|++.+++. +..+. .|+||||+|+..|+.+++++|++.+++
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-- 146 (232)
T 2rfa_A 72 LYEGQTALHIAVINQNVNLVRALLARGASV---SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD-- 146 (232)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC--
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHhCCCCC---CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC--
Confidence 345999999999999999999999988775 55544 799999999999999999999998764
Q ss_pred cccccCCCCCCCcHHHHHHhCCCC
Q 044483 187 PKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 187 ~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
++.+|..|+||||+|+..|+.
T Consensus 147 ---~~~~d~~g~t~L~~A~~~~~~ 167 (232)
T 2rfa_A 147 ---IRAQDSLGNTVLHILILQPNK 167 (232)
T ss_dssp ---TTCCCTTSCCHHHHHHTCSCH
T ss_pred ---CCCCCCCCCCHHHHHHHcCCh
Confidence 999999999999999999986
No 14
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=5.3e-28 Score=191.02 Aligned_cols=147 Identities=13% Similarity=0.065 Sum_probs=128.8
Q ss_pred CchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccccc
Q 044483 42 KISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNW 121 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~ 121 (235)
+.||||.|+..|+.++++.++..++ ...+..+..|.||||+|+..++. ++|++|++.++.... .+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~~~ 67 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGD-----NLVNKPDERGFTPLIWASAFGEI--ETVRFLLEWGADPHI-------LAK 67 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCS-----GGGGCCCTTSCCHHHHHHHTTCH--HHHHHHHHHTCCTTC-------CCT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCc-----ccccCCCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCchh-------hcc
Confidence 4689999999999999999999887 33455577889999999999977 999999998775532 223
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHH
Q 044483 122 AFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLL 201 (235)
Q Consensus 122 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 201 (235)
.|+||||+|+..|+.+++++|++.+.+. +..|..|+||||+|+..|+.+++++|++.+++ ++.+|..|+|||
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~t~l 139 (172)
T 3v30_A 68 ERESALSLASTGGYTDIVGLLLERDVDI---NIYDWNGGTPLLYAVRGNHVKCVEALLARGAD-----LTTEADSGYTPM 139 (172)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHH
T ss_pred cCCCHHHHHHHCCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----ccccCCCCCCHH
Confidence 4899999999999999999999988776 89999999999999999999999999998754 899999999999
Q ss_pred HHHHhCCCC
Q 044483 202 HHVADMKHY 210 (235)
Q Consensus 202 HlAa~~g~~ 210 (235)
|+|+..|+.
T Consensus 140 ~~A~~~~~~ 148 (172)
T 3v30_A 140 DLAVALGYR 148 (172)
T ss_dssp HHHHHHTCH
T ss_pred HHHHHhCcH
Confidence 999999986
No 15
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=6.6e-28 Score=187.37 Aligned_cols=145 Identities=14% Similarity=0.075 Sum_probs=128.0
Q ss_pred CchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccccc
Q 044483 42 KISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNW 121 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~ 121 (235)
+.||||.|+..|+.++++.|++.+++ + ..+..|.||||+|+..|+. +++++|++.++.... .+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~-----~--~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~~~ 65 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP-----F--TTDWLGTSPLHLAAQYGHF--STTEVLLRAGVSRDA-------RTK 65 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC-----C--CCCTTCCCHHHHHHHHTCH--HHHHHHHTTTCCTTC-------CCT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC-----C--CcCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCC-------CCC
Confidence 47999999999999999999998762 2 1366789999999999977 999999998765431 233
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHH
Q 044483 122 AFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLL 201 (235)
Q Consensus 122 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 201 (235)
.|+||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|+|||
T Consensus 66 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~t~l 137 (153)
T 1awc_B 66 VDRTPLHMAASEGHANIVEVLLKHGADV---NAKDMLKMTALHWATEHNHQEVVELLIKYGAD-----VHTQSKFCKTAF 137 (153)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----ccccCCCCCCHH
Confidence 4899999999999999999999988776 89999999999999999999999999998764 899999999999
Q ss_pred HHHHhCCCC
Q 044483 202 HHVADMKHY 210 (235)
Q Consensus 202 HlAa~~g~~ 210 (235)
|+|+..|+.
T Consensus 138 ~~A~~~~~~ 146 (153)
T 1awc_B 138 DISIDNGNE 146 (153)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHcCCH
Confidence 999999986
No 16
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=1.2e-27 Score=196.87 Aligned_cols=168 Identities=16% Similarity=0.155 Sum_probs=104.5
Q ss_pred HHHHHHHHHhhCCCCCCccccccccCCCccccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCCh
Q 044483 5 ADKLLKMLVKETPCLGDGEQNLEIFSPNPESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNM 84 (235)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~ 84 (235)
.-+.|++|+++.+... ...+.+|.||||.|+..|+.++++.|++.+. ..+..+..|.||
T Consensus 18 ~~~~v~~ll~~~~~~~---------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~------~~~~~~~~g~t~ 76 (231)
T 3aji_A 18 KLDELKERILADKSLA---------------TRTDQDSRTALHWACSAGHTEIVEFLLQLGV------PVNDKDDAGWSP 76 (231)
T ss_dssp CHHHHHHHHHHCGGGG---------------GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC------CSCCCCTTSCCH
T ss_pred CHHHHHHHHHhchhhh---------------hcCCCCCCCHHHHHHHcCcHHHHHHHHHhCC------CCCCcCCCCCCH
Confidence 3456777777654321 1223456777777777777777777766654 122334556677
Q ss_pred hhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHH
Q 044483 85 IKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILH 164 (235)
Q Consensus 85 Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh 164 (235)
||+|+..++. +++++|++.++.... .+..|.||||+|+..|+.+++++|++.+.+. +..|..|.||||
T Consensus 77 L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L~ 144 (231)
T 3aji_A 77 LHIAASAGXD--EIVKALLVKGAHVNA-------VNQNGCTPLHYAASKNRHEIAVMLLEGGANP---DAKDHYDATAMH 144 (231)
T ss_dssp HHHHHHHTCH--HHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHH
T ss_pred HHHHHHcCHH--HHHHHHHHcCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCcHHH
Confidence 7777776655 777777765554321 1223667777777777777777777665554 566666777777
Q ss_pred HHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 165 VSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 165 ~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.
T Consensus 145 ~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~ 185 (231)
T 3aji_A 145 RAAAKGNLKMVHILLFYKAS-----TNIQDTEGNTPLHLACDEERV 185 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-----SCCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHhcCCC-----ccccCCCCCCHHHHHHHCCCH
Confidence 77777777777777765543 666667777777777776663
No 17
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=1.9e-28 Score=203.02 Aligned_cols=175 Identities=11% Similarity=0.046 Sum_probs=141.4
Q ss_pred CCCccccccccCCCcc-----ccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCC
Q 044483 19 LGDGEQNLEIFSPNPE-----SSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDF 93 (235)
Q Consensus 19 ~~~~~~~~~~l~~~~~-----~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~ 93 (235)
..+..+.++.++.... ....+..|.||||.|+..|+.++++.|++.+. ..+..+..|.||||+|+..++
T Consensus 17 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~ 90 (236)
T 1ikn_D 17 IHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC------DPELRDFRGNTPLHLACEQGC 90 (236)
T ss_dssp HTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCC------CSCCCCTTCCCHHHHHHHHTC
T ss_pred HcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHcCC
Confidence 4456677777775432 34455669999999999999999999998876 223446788999999999997
Q ss_pred ChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCC-CCChHHHHHHHcCCH
Q 044483 94 SAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE-KEQNILHVSVKRRQY 172 (235)
Q Consensus 94 ~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~-~g~tpLh~Av~~g~~ 172 (235)
. +++++|++.+...... ......+..|.||||+|+..|+.+++++|++.+++. +.++. .|+||||+|+..|+.
T Consensus 91 ~--~~v~~Ll~~~~~~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~~g~tpL~~A~~~~~~ 164 (236)
T 1ikn_D 91 L--ASVGVLTQSCTTPHLH-SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV---NAQEPCNGRTALHLAVDLQNP 164 (236)
T ss_dssp H--HHHHHHHHSTTTTSSS-CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT---TCCCTTTCCCHHHHHHHTTCH
T ss_pred H--HHHHHHHhcccchhHH-HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCCHHHHHHHcCCH
Confidence 7 9999999976532110 001122345999999999999999999999998886 78887 999999999999999
Q ss_pred HHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 173 KVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 173 ~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
+++++|++.+++ ++.+|..|+||||+|+..|+.
T Consensus 165 ~~v~~Ll~~ga~-----~~~~~~~g~tpl~~A~~~~~~ 197 (236)
T 1ikn_D 165 DLVSLLLKCGAD-----VNRVTYQGYSPYQLTWGRPST 197 (236)
T ss_dssp HHHHHHHTTTCC-----SCCCCTTCCCGGGGCTTSSCH
T ss_pred HHHHHHHHcCCC-----CCcccCCCCCHHHHHHccCch
Confidence 999999998764 899999999999999999996
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=5.1e-28 Score=203.00 Aligned_cols=169 Identities=15% Similarity=0.165 Sum_probs=131.5
Q ss_pred CCccccccccCCCccccC--CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHH
Q 044483 20 GDGEQNLEIFSPNPESST--TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGE 97 (235)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~--~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~ 97 (235)
.+..+.++.|+..+.... .+.+|.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..++. +
T Consensus 33 ~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~--~ 104 (253)
T 1yyh_A 33 EDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD------ANIQDNMGRTPLHAAVSADAQ--G 104 (253)
T ss_dssp -------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCH--H
T ss_pred CCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCH--H
Confidence 346777888876544332 356799999999999999999999998762 234467789999999999977 9
Q ss_pred HHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHH
Q 044483 98 LVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFEL 177 (235)
Q Consensus 98 iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~ 177 (235)
++++|++.+..... ..+..|.||||+|+..|+.+++++|++.+++. +..|..|+||||+|+..|+.+++++
T Consensus 105 ~v~~Ll~~~~~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~d~~g~t~L~~A~~~~~~~~v~~ 175 (253)
T 1yyh_A 105 VFQILIRNRATDLD------ARMHDGTTPLILAARLAVEGMLEDLINSHADV---NAVDDLGKSALHWAAAVNNVDAAVV 175 (253)
T ss_dssp HHHHHHHSTTSCTT------CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT---TCBCTTSCBHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHcCCCCcc------ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999997653321 12334899999999999999999999988776 8999999999999999999999999
Q ss_pred HHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 178 IMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 178 Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
|++.+++ ++.+|..|+||||+|+..|+.
T Consensus 176 Ll~~ga~-----~~~~~~~g~tpL~~A~~~~~~ 203 (253)
T 1yyh_A 176 LLKNGAN-----KDMQNNREETPLFLAAREGSY 203 (253)
T ss_dssp HHHTTCC-----TTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHcCCC-----CCCcCCCCCCHHHHHHHCCCH
Confidence 9998764 899999999999999999995
No 19
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=5.4e-28 Score=202.58 Aligned_cols=164 Identities=12% Similarity=0.064 Sum_probs=130.3
Q ss_pred CCCCCchHHHHHHhc---CcHHHHHHHHhhChhhH--HHHhcc---ccccCCCChhhHHHhcCCChHHHHHHHHhcCCcc
Q 044483 38 TSSDKISIISLGLGK---GNMLKAKKLVDFSAGEL--NELLLK---KDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTN 109 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~---g~~~~~~~ll~~~~~~~--~~~l~~---~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~ 109 (235)
.+.+|+||||.|+.. |+.++++.|++.+++.- ..++.. ..+..|.||||+|+..|+. ++|++|++.+++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~--~~v~~Ll~~ga~~ 116 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSL--QCVKLLVENGADV 116 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCH--HHHHHHHHTTCCT
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCH--HHHHHHHHcCCCC
Confidence 456799999999999 99999999998876210 000000 1135689999999999977 9999999988765
Q ss_pred hhhhhcc------cccccCcchHHHHHHHcCCHHHHHHHHH---hCCCccccccCCCCCChHHHHHHH--cCCHH-----
Q 044483 110 KAVHNYK------KDKNWAFRLTLLFAASNGITEILKEIIH---QHPQAILLDNLNEKEQNILHVSVK--RRQYK----- 173 (235)
Q Consensus 110 ~~~~~~~------~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~---~~~~~~~~~~~d~~g~tpLh~Av~--~g~~~----- 173 (235)
....... ...+..|.||||+|+..|+.+++++|++ .+.+. +.+|..|+||||+|+. .++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~---n~~d~~g~TpLh~A~~~~~~~~~~~~~~ 193 (256)
T 2etb_A 117 HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL---EATDSLGNTVLHALVMIADNSPENSALV 193 (256)
T ss_dssp TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT---TCCCTTSCCHHHHHHHHCCSCHHHHHHH
T ss_pred CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc---CccCCCCCCHHHHHHHcccCCchhhHHH
Confidence 4211000 0001128999999999999999999999 77665 8999999999999999 88888
Q ss_pred --HHHHHHHhccccccccc-------cCCCCCCCcHHHHHHhCCCCC
Q 044483 174 --VFELIMKDMRLSVPKWA-------SRIDKKGYTLLHHVADMKHYK 211 (235)
Q Consensus 174 --iv~~Ll~~~~~~~~~~~-------~~~d~~G~TpLHlAa~~g~~~ 211 (235)
++++|++.+++ + +.+|..|+||||+|++.|+..
T Consensus 194 ~~iv~~Ll~~ga~-----~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 235 (256)
T 2etb_A 194 IHMYDGLLQMGAR-----LCPTVQLEEISNHQGLTPLKLAAKEGKIE 235 (256)
T ss_dssp HHHHHHHHHHHHH-----HSTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCC-----cccccccccccCCCCCCHHHHHHHhCCHH
Confidence 99999998864 6 889999999999999999963
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=199.77 Aligned_cols=181 Identities=12% Similarity=0.068 Sum_probs=103.3
Q ss_pred cHHHHHHHHHhhCCCCC----------------CccccccccCCCc-cccCCCCCCchHHHHHHhcCcHHHHHHHHhhCh
Q 044483 4 NADKLLKMLVKETPCLG----------------DGEQNLEIFSPNP-ESSTTSSDKISIISLGLGKGNMLKAKKLVDFSA 66 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~-~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~ 66 (235)
+.-++|++|++....+. +..+.++.|+... .....+.+|.||||.|+..|+.++++.|++.++
T Consensus 14 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (261)
T 2xai_A 14 GHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA 93 (261)
T ss_dssp TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 34578888888643211 2222233333221 222233446666666666666666666665554
Q ss_pred hhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhC
Q 044483 67 GELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQH 146 (235)
Q Consensus 67 ~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~ 146 (235)
+ +. ....|.||||+|+..|+. +++++|++.+++... .+..|.||||+|+..|+.+++++|++.+
T Consensus 94 ~-----~~--~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 157 (261)
T 2xai_A 94 S-----VQ--PESDLASPIHEAARRGHV--ECVNSLIAYGGNIDH-------KISHLGTPLYLACENQQRACVKKLLESG 157 (261)
T ss_dssp C-----SS--CSCTTCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-------CBTTTBCHHHHHHHTTCHHHHHHHHHHT
T ss_pred C-----CC--CCCCCCCHHHHHHHcCcH--HHHHHHHHcCCCCCc-------CCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 1 11 123356666666666655 666666665544321 1223667777777777777777777666
Q ss_pred CCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCC
Q 044483 147 PQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKH 209 (235)
Q Consensus 147 ~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~ 209 (235)
++. +. |..|+||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|+..++
T Consensus 158 ~~~---~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad-----~~~~d~~g~tpl~~A~~~~~ 211 (261)
T 2xai_A 158 ADV---NQ-GKGQDSPLHAVARTASEELACLLMDFGAD-----TQAKNAEGKRPVELVPPESP 211 (261)
T ss_dssp CCT---TC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCGGGGSCTTCT
T ss_pred CCC---CC-CCCCCChHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCChhhhcccccc
Confidence 554 43 56667777777777777777777766543 66677777777777765554
No 21
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.5e-27 Score=185.36 Aligned_cols=145 Identities=12% Similarity=0.122 Sum_probs=125.3
Q ss_pred CchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccccc
Q 044483 42 KISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNW 121 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~ 121 (235)
|.||||.|+..|+.++++.|++... ...+..+..|.||||+ +..|+. +++++|++.++.... .+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~-~~~~~~--~~v~~Ll~~g~~~~~-------~~~ 66 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHREL-----VHPDALNRFGKTALQV-MMFGST--AIALELLKQGASPNV-------QDT 66 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTC-----CCTTCCCTTSCCHHHH-SCTTCH--HHHHHHHHTTCCTTC-------CCT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhC-----cCccccCCCCCcHHHH-HHcCCH--HHHHHHHHCCCCCCC-------cCC
Confidence 6799999999999999999998742 1223446778999999 887866 999999998776532 233
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHH
Q 044483 122 AFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLL 201 (235)
Q Consensus 122 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 201 (235)
.|+||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++. .+ ++.+|.+|+|||
T Consensus 67 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-----~~~~~~~g~t~l 137 (156)
T 1bd8_A 67 SGTSPVHDAARTGFLDTLKVLVEHGADV---NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD-----LHRRDARGLTPL 137 (156)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCS---CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-----TTCCCTTSCCHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCC---CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC-----CCCcCCCCCCHH
Confidence 4899999999999999999999988776 89999999999999999999999999986 43 899999999999
Q ss_pred HHHHhCCCC
Q 044483 202 HHVADMKHY 210 (235)
Q Consensus 202 HlAa~~g~~ 210 (235)
|+|+..|+.
T Consensus 138 ~~A~~~~~~ 146 (156)
T 1bd8_A 138 ELALQRGAQ 146 (156)
T ss_dssp HHHHHSCCH
T ss_pred HHHHHcCcH
Confidence 999999986
No 22
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=1.6e-27 Score=199.88 Aligned_cols=167 Identities=15% Similarity=0.165 Sum_probs=129.0
Q ss_pred CCCCchHHHHHH---hcCcHHHHHHHHhhChhh--HHHHhcc---ccccCCCChhhHHHhcCCChHHHHHHHHhcCCcch
Q 044483 39 SSDKISIISLGL---GKGNMLKAKKLVDFSAGE--LNELLLK---KDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNK 110 (235)
Q Consensus 39 ~~~G~t~Lh~A~---~~g~~~~~~~ll~~~~~~--~~~~l~~---~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~ 110 (235)
+.+|.||||.|+ ..|+.++++.|++.+.+. +..++.. ..+..|.||||+|+..|+. ++|++|++.+++..
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~--~~v~~Ll~~ga~~~ 120 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCK--HYVELLVEKGADVH 120 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCH--HHHHHHHHTTCCTT
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCH--HHHHHHHhCCCCcC
Confidence 356999999999 789999999999876521 1111111 1134789999999999977 99999999887654
Q ss_pred hhhhc-------ccccccCcchHHHHHHHcCCHHHHHHHHH---hCCCccccccCCCCCChHHHHHHHcCC---------
Q 044483 111 AVHNY-------KKDKNWAFRLTLLFAASNGITEILKEIIH---QHPQAILLDNLNEKEQNILHVSVKRRQ--------- 171 (235)
Q Consensus 111 ~~~~~-------~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~---~~~~~~~~~~~d~~g~tpLh~Av~~g~--------- 171 (235)
..... ....+..|+||||+|+..|+.++|++|++ .+.+. +.+|..|+||||+|+..|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~---~~~d~~g~TpLh~A~~~~~~~~~~~~~~ 197 (260)
T 3jxi_A 121 AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL---RRQDSRGNTVLHALVAIADNTRENTKFV 197 (260)
T ss_dssp CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT---TCCCTTSCCHHHHHHHHCCSSHHHHHHH
T ss_pred ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC---cccCCCCCcHHHHHHHhccCchhHHHHH
Confidence 21100 00000248999999999999999999999 66665 8999999999999999888
Q ss_pred HHHHHHHHHhccccc--cccccCCCCCCCcHHHHHHhCCCC
Q 044483 172 YKVFELIMKDMRLSV--PKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 172 ~~iv~~Ll~~~~~~~--~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
.+++++|++.+++.. ....+.+|..|+||||+|++.|+.
T Consensus 198 ~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 198 TKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp HHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 799999999876400 001178999999999999999996
No 23
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=1.9e-27 Score=195.58 Aligned_cols=150 Identities=11% Similarity=0.063 Sum_probs=130.9
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccc
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKK 117 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~ 117 (235)
.+..|.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..++. +++++|++.++....
T Consensus 69 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~------ 134 (231)
T 3aji_A 69 KDDAGWSPLHIAASAGXDEIVKALLVKGAH------VNAVNQNGCTPLHYAASKNRH--EIAVMLLEGGANPDA------ 134 (231)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC------
T ss_pred cCCCCCCHHHHHHHcCHHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCC------
Confidence 445699999999999999999999998762 234466789999999999977 999999998775432
Q ss_pred ccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCC
Q 044483 118 DKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKG 197 (235)
Q Consensus 118 ~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 197 (235)
.+..|.||||+|+..|+.+++++|++.+.+. +.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|
T Consensus 135 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g 205 (231)
T 3aji_A 135 -KDHYDATAMHRAAAKGNLKMVHILLFYKAST---NIQDTEGNTPLHLACDEERVEEAKFLVTQGAS-----IYIENKEE 205 (231)
T ss_dssp -CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS---CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----SCCCCTTS
T ss_pred -cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc---cccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCC
Confidence 2334899999999999999999999988776 88999999999999999999999999998764 89999999
Q ss_pred CcHHHHHHhCCCC
Q 044483 198 YTLLHHVADMKHY 210 (235)
Q Consensus 198 ~TpLHlAa~~g~~ 210 (235)
+||||+|+..|+.
T Consensus 206 ~t~l~~A~~~~~~ 218 (231)
T 3aji_A 206 KTPLQVAKGGLGL 218 (231)
T ss_dssp CCHHHHSCHHHHH
T ss_pred CCHHHHHHhhHHH
Confidence 9999999987765
No 24
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=2.9e-27 Score=186.84 Aligned_cols=148 Identities=18% Similarity=0.157 Sum_probs=130.0
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccc
Q 044483 40 SDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDK 119 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~ 119 (235)
..+.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..++. +++++|++.++.... .
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~ 76 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGAD------VNAEDASGWTPLHLAAFNGHL--EIVEVLLKNGADVNA-------V 76 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-------C
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCc-------c
Confidence 4589999999999999999999998762 234467789999999999977 999999998775431 2
Q ss_pred ccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCc
Q 044483 120 NWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYT 199 (235)
Q Consensus 120 ~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 199 (235)
+..|.||||+|+..|+.+++++|++.+++. +..|..|+||||+|+..|+.+++++|++.+.+ ++.+|..|.|
T Consensus 77 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t 148 (169)
T 2y1l_E 77 DHAGMTPLRLAALFGHLEIVEVLLKNGADV---NANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD-----VNAQDKFGKT 148 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCC
Confidence 334899999999999999999999988776 88999999999999999999999999998754 8899999999
Q ss_pred HHHHHHhCCCC
Q 044483 200 LLHHVADMKHY 210 (235)
Q Consensus 200 pLHlAa~~g~~ 210 (235)
|||+|++.|+.
T Consensus 149 ~l~~A~~~~~~ 159 (169)
T 2y1l_E 149 AFDISIDNGNE 159 (169)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHhCCH
Confidence 99999999986
No 25
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2e-27 Score=185.53 Aligned_cols=148 Identities=12% Similarity=0.134 Sum_probs=127.8
Q ss_pred CCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccc
Q 044483 41 DKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKN 120 (235)
Q Consensus 41 ~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~ 120 (235)
...||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+. ++. +++++|++.++.... .+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~------~~~~~~~g~t~L~~A~~-~~~--~~v~~Ll~~g~~~~~-------~~ 67 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN------VNAQNGFGRTALQVMKL-GNP--EIARRLLLRGANPDL-------KD 67 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC------TTCCCTTSCCHHHHCCS-SCH--HHHHHHHHTTCCTTC-------CC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC------ccccCccCccHHHHHHc-CcH--HHHHHHHHcCCCCCC-------CC
Confidence 367999999999999999999987762 23446778999999998 766 999999998775531 23
Q ss_pred cCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcH
Q 044483 121 WAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTL 200 (235)
Q Consensus 121 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 200 (235)
..|+||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++.+.. .++.+|..|+||
T Consensus 68 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~~g~t~ 140 (162)
T 1ihb_A 68 RTGFAVIHDAARAGFLDTLQTLLEFQADV---NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS----NVGHRNHKGDTA 140 (162)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC----CTTCCCTTSCCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC----CCCCcCCCCCcH
Confidence 34899999999999999999999988776 89999999999999999999999999998753 368899999999
Q ss_pred HHHHHhCCCCC
Q 044483 201 LHHVADMKHYK 211 (235)
Q Consensus 201 LHlAa~~g~~~ 211 (235)
||+|+..|+..
T Consensus 141 l~~A~~~~~~~ 151 (162)
T 1ihb_A 141 CDLARLYGRNE 151 (162)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHcCCHH
Confidence 99999999863
No 26
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=1e-27 Score=204.69 Aligned_cols=157 Identities=15% Similarity=0.147 Sum_probs=132.1
Q ss_pred ccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcC---CChHHHHHHHHhcCCcchh
Q 044483 35 SSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVD---FSAGELVELFVKKDCTNKA 111 (235)
Q Consensus 35 ~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~---~~~~~iv~~Ll~~~~~~~~ 111 (235)
.+..+.+|+||||.|+..|+.++++.|++.++ ...+..+..|.||||+|+... ....+++++|++.+.....
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~ 178 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGV-----CKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAK 178 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSC-----CCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-----CcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccc
Confidence 34556779999999999999999999999876 233455778999999999431 1244999999997754431
Q ss_pred hhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHH-hccccccccc
Q 044483 112 VHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMK-DMRLSVPKWA 190 (235)
Q Consensus 112 ~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~-~~~~~~~~~~ 190 (235)
.+..|+||||+|+..|+.++|++|++.+++. +.+|..|+||||+|+..|+.+++++|++ .+. ++
T Consensus 179 -------~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~---n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ga-----d~ 243 (276)
T 4hbd_A 179 -------ASQAGQTALMLAVSHGRVDVVKALLACEADV---NVQDDDGSTALMCACEHGHKEIAGLLLAVPSC-----DI 243 (276)
T ss_dssp -------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTC-----CT
T ss_pred -------cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC---CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC-----CC
Confidence 2234899999999999999999999998886 8999999999999999999999999998 554 48
Q ss_pred cCCCCCCCcHHHHHHhCCCCC
Q 044483 191 SRIDKKGYTLLHHVADMKHYK 211 (235)
Q Consensus 191 ~~~d~~G~TpLHlAa~~g~~~ 211 (235)
+.+|..|+||||+|+..|+..
T Consensus 244 ~~~d~~g~TpL~~A~~~g~~~ 264 (276)
T 4hbd_A 244 SLTDRDGSTALMVALDAGQSE 264 (276)
T ss_dssp TCCCTTSCCHHHHHHHHTCHH
T ss_pred cCcCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999863
No 27
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=2.9e-28 Score=201.31 Aligned_cols=114 Identities=13% Similarity=0.107 Sum_probs=53.9
Q ss_pred CCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCC
Q 044483 80 NKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE 159 (235)
Q Consensus 80 ~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g 159 (235)
.|.||||+|+..++. +++++|++.++..... ....|.||||+|+..|+.+++++|++.+++. +..|..|
T Consensus 115 ~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g 183 (241)
T 1k1a_A 115 DGLTALHVAVNTECQ--ETVQLLLERGADIDAV------DIKSGRSPLIHAVENNSLSMVQLLLQHGANV---NAQMYSG 183 (241)
T ss_dssp TSCCHHHHHHHHTCH--HHHHHHHHTTCCTTCC------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCBCTTS
T ss_pred CCCcHHHHHHHcCCH--HHHHHHHHcCCCcccc------cccCCCcHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCC
Confidence 344555555554443 5555555444332210 0012445555555555555555555544443 4445555
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCC
Q 044483 160 QNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKH 209 (235)
Q Consensus 160 ~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~ 209 (235)
+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..|+
T Consensus 184 ~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 184 SSALHSASGRGLLPLVRTLVRSGAD-----SSLKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCTTTTCSSHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcCCC-----CCCcCCCCCCHHHHHHhcCc
Confidence 5555555555555555555554432 44455555555555555444
No 28
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=7.7e-28 Score=188.83 Aligned_cols=149 Identities=15% Similarity=0.152 Sum_probs=128.2
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccc
Q 044483 39 SSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKD 118 (235)
Q Consensus 39 ~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~ 118 (235)
+.+|.||||.|+..|+.++++.|++..+ ......+..|.||||+|+..++. +++++|++.++....
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~------- 70 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQS-----VNCRDIEGRQSTPLHFAAGYNRV--SVVEYLLQHGADVHA------- 70 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTT-----TTCCCTTTTCCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-------
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCC-----CCccccccCCCCHHHHHHHcChH--HHHHHHHhcCCCCCc-------
Confidence 4568999999999999999999998655 23344466778999999999977 999999998775531
Q ss_pred cccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCC
Q 044483 119 KNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGY 198 (235)
Q Consensus 119 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 198 (235)
.+..|+||||+|+..|+.+++++|++.+.+. +..|..|+||||+|+..|+.+++++|++.+.+ ++.+|..|+
T Consensus 71 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~ 142 (165)
T 3twr_A 71 KDKGGLVPLHNACSYGHYEVAELLVKHGAVV---NVADLWKFTPLHEAAAKGKYEICKLLLQHGAD-----PTKKNRDGN 142 (165)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSC
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCC
Confidence 2334899999999999999999999988776 89999999999999999999999999998754 899999999
Q ss_pred cHHHHHHhCCCC
Q 044483 199 TLLHHVADMKHY 210 (235)
Q Consensus 199 TpLHlAa~~g~~ 210 (235)
||||+|+. |+.
T Consensus 143 t~l~~a~~-~~~ 153 (165)
T 3twr_A 143 TPLDLVKD-GDT 153 (165)
T ss_dssp CTGGGSCT-TCH
T ss_pred ChhHhHhc-CCh
Confidence 99999876 664
No 29
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=2e-27 Score=200.40 Aligned_cols=155 Identities=15% Similarity=0.109 Sum_probs=130.0
Q ss_pred CCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcc
Q 044483 37 TTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYK 116 (235)
Q Consensus 37 ~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~ 116 (235)
..+.+|+||||.|+..|+.+++++|++.+++. ...+..+..|.||||+|+..|+. ++|++|++.++....
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~ga~~~~----- 73 (282)
T 1oy3_D 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGH---EYLDLQNDLGQTALHLAAILGEA--STVEKLYAAGAGVLV----- 73 (282)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTS---GGGGCCCTTSCCHHHHHHHHTCH--HHHHHHHHTTCCSSC-----
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc---ccccccCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCC-----
Confidence 35567999999999999999999999876520 11344567889999999999987 999999998876542
Q ss_pred cccccCcchHHHHHHHcCCHHHHHHHHHhCCCc----------------------------------------------c
Q 044483 117 KDKNWAFRLTLLFAASNGITEILKEIIHQHPQA----------------------------------------------I 150 (235)
Q Consensus 117 ~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~----------------------------------------------~ 150 (235)
.+..|+||||+|+..|+.+++++|++.++.. +
T Consensus 74 --~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (282)
T 1oy3_D 74 --AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL 151 (282)
T ss_dssp --CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGT
T ss_pred --CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcC
Confidence 2334899999999999999999999876541 3
Q ss_pred ccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCC-CCCcHHHHHHhCCCC
Q 044483 151 LLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDK-KGYTLLHHVADMKHY 210 (235)
Q Consensus 151 ~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~-~G~TpLHlAa~~g~~ 210 (235)
+..|..|+||||+|+..|+.+++++|++.+.+ ++..+. .|+||||+|+..|+.
T Consensus 152 --~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~~g~tpL~~A~~~~~~ 205 (282)
T 1oy3_D 152 --EAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-----LNKPEPTCGRTPLHLAVEAQAA 205 (282)
T ss_dssp --TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-----TTCCCTTTCCCHHHHHHHTTCH
T ss_pred --CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCcCHHHHHHHcCCH
Confidence 67788999999999999999999999998764 888875 599999999999995
No 30
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=2.7e-28 Score=213.00 Aligned_cols=162 Identities=9% Similarity=-0.005 Sum_probs=127.6
Q ss_pred ccccCCC-ccccC-CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCC---ChHHHHH
Q 044483 26 LEIFSPN-PESST-TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDF---SAGELVE 100 (235)
Q Consensus 26 ~~~l~~~-~~~~~-~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~---~~~~iv~ 100 (235)
++.|+.. .+... .+.+|+||||+|+..|+.+++++|++.+++ .+..+..|.||||+|+..|+ . ++++
T Consensus 113 ~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad------~n~~d~~g~TpLh~A~~~g~~~~~--~~~~ 184 (327)
T 1sw6_A 113 NDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN------RLYGDNMGESCLVKAVKSVNNYDS--GTFE 184 (327)
T ss_dssp HHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTBCCTTCCCHHHHHHHSSHHHHT--TCHH
T ss_pred HHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHhcccccH--HHHH
Confidence 3444433 22333 566799999999999999999999999872 24557789999999999886 4 6677
Q ss_pred HHHhcCCcchhhhhcccccccCcchHHHHHHH----cCCHHHHHHHHHhCCC----------------------------
Q 044483 101 LFVKKDCTNKAVHNYKKDKNWAFRLTLLFAAS----NGITEILKEIIHQHPQ---------------------------- 148 (235)
Q Consensus 101 ~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~----~g~~~iv~~Ll~~~~~---------------------------- 148 (235)
.|++.+.... + ..+..|+||||+|++ .|+.+++++|++....
T Consensus 185 ~ll~~~~~~~---~---~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g 258 (327)
T 1sw6_A 185 ALLDYLYPCL---I---LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER 258 (327)
T ss_dssp HHHHHHGGGG---G---EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred HHHHhhhccc---c---CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccC
Confidence 7776432211 1 123459999999999 9999999999976320
Q ss_pred ----------------ccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCC
Q 044483 149 ----------------AILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMK 208 (235)
Q Consensus 149 ----------------~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g 208 (235)
.+ +.+|..|+||||+|+..|+.++|++|++.+++ ++.+|..|+||||+|++.|
T Consensus 259 ~t~L~~a~~~~~Ll~~~~--n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad-----~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 259 KDSILENLDLKWIIANML--NAQDSNGDTCLNIAARLGNISIVDALLDYGAD-----PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp -CHHHHHCSHHHHHHHTT--TCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC-----TTCCCTTSCCGGGGTCC--
T ss_pred CChhHHHHHHHHHHHhCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCCCHHHHHHhcC
Confidence 14 88899999999999999999999999998865 9999999999999999876
No 31
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=2.7e-27 Score=208.10 Aligned_cols=189 Identities=13% Similarity=0.023 Sum_probs=143.8
Q ss_pred cHHHHHHHHHhhCCCC----------------CCccccccccCCCccccCCCCCCchHHHHHHhcCcHHHHHHHHhh---
Q 044483 4 NADKLLKMLVKETPCL----------------GDGEQNLEIFSPNPESSTTSSDKISIISLGLGKGNMLKAKKLVDF--- 64 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~--- 64 (235)
+.-++|++|++....+ .++.+.++.|+.... .....+|.||||.|+..|+.++++.|++.
T Consensus 31 g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 109 (364)
T 3ljn_A 31 GQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGE-VHSLWHGQKPIHLAVMANKTDLVVALVEGAKE 109 (364)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC-CCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CccccCCCCHHHHHHHcCCHHHHHHHHHhccc
Confidence 3457889999874322 133344555553322 33334688888888888888888888876
Q ss_pred -ChhhHHHHhc------------cccccCCCChhhHHHhcC--CChHHHHHHHHhcCCcchhhhhcccccccCcchHHHH
Q 044483 65 -SAGELNELLL------------KKDCTNKGNMIKAKKFVD--FSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLF 129 (235)
Q Consensus 65 -~~~~~~~~l~------------~~~~~~~~t~Lh~A~~~~--~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~ 129 (235)
+.. .+.++. +..+..|.||||+|+..| +. ++|++|++.+++... .+..|+||||+
T Consensus 110 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~--~~v~~Ll~~ga~~~~-------~d~~g~t~L~~ 179 (364)
T 3ljn_A 110 RGQM-PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYL--EMIKILVQLGASPTA-------KDKADETPLMR 179 (364)
T ss_dssp HTCC-HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGH--HHHHHHHHHTCCTTC-------CCTTSCCHHHH
T ss_pred cCCC-HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchH--HHHHHHHHcCCCCcc-------cCCCCCCHHHH
Confidence 221 111111 013557899999999999 65 999999998876542 23348999999
Q ss_pred HHHcCCHHHHHHHHHhCCCc----cccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHH
Q 044483 130 AASNGITEILKEIIHQHPQA----ILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVA 205 (235)
Q Consensus 130 Aa~~g~~~iv~~Ll~~~~~~----~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa 205 (235)
|+..|+.++|++|++.+++. + +..|..|+||||+|+..|+.++|++|++.+++ ++.+|..|+||||+|+
T Consensus 180 A~~~g~~~~v~~Ll~~g~~~~~~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-----~~~~d~~g~tpL~~A~ 252 (364)
T 3ljn_A 180 AMEFRNREALDLMMDTVPSKSSLRL--DYANKQGNSHLHWAILINWEDVAMRFVEMGID-----VNMEDNEHTVPLYLSV 252 (364)
T ss_dssp HHHTTCHHHHHHHHHHCSCSSSCCT--TCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC-----TTCCCTTSCCHHHHHH
T ss_pred HHHcCCHHHHHHHHhcccccccccc--cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHH
Confidence 99999999999999988772 3 88999999999999999999999999998764 8999999999999999
Q ss_pred hCCCC
Q 044483 206 DMKHY 210 (235)
Q Consensus 206 ~~g~~ 210 (235)
..|+.
T Consensus 253 ~~g~~ 257 (364)
T 3ljn_A 253 RAAMV 257 (364)
T ss_dssp HTCCH
T ss_pred HhChH
Confidence 99995
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=7e-27 Score=191.63 Aligned_cols=150 Identities=14% Similarity=0.147 Sum_probs=128.6
Q ss_pred CchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccccc
Q 044483 42 KISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNW 121 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~ 121 (235)
|+||||.|+..|+.++++.|++.++ ......+..|.||||+|+..|+. +++++|++.++..... . ..+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~~~~~~~~-~---~~~~ 70 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKP-----SLLLQKDQDGRIPLHWSVSFQAH--EITSFLLSKMENVNLD-D---YPDD 70 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCG-----GGTTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTCTTCCGG-G---CCCT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCc-----cccccCCCCCCCHHHHHHHcCCH--HHHHHHHhcccccccc-c---cCCC
Confidence 7899999999999999999999887 34444577889999999999977 9999999987433211 1 1233
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHhC--CCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCc
Q 044483 122 AFRLTLLFAASNGITEILKEIIHQH--PQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYT 199 (235)
Q Consensus 122 ~g~TpLh~Aa~~g~~~iv~~Ll~~~--~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 199 (235)
.|+||||+|+..|+.+++++|++.+ ++. +..|..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+|
T Consensus 71 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t 142 (228)
T 2dzn_A 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDL---NKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-----VRIKDKFNQI 142 (228)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHSSSSCCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----SCCCCTTSCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccc---ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-----ccccCCCCCC
Confidence 5899999999999999999999987 444 88899999999999999999999999998754 8999999999
Q ss_pred HHHHHHhCCCC
Q 044483 200 LLHHVADMKHY 210 (235)
Q Consensus 200 pLHlAa~~g~~ 210 (235)
|||+|+..|+.
T Consensus 143 ~L~~A~~~~~~ 153 (228)
T 2dzn_A 143 PLHRAASVGSL 153 (228)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHcCCH
Confidence 99999999985
No 33
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=2.8e-27 Score=195.32 Aligned_cols=154 Identities=10% Similarity=0.038 Sum_probs=129.4
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccc
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKK 117 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~ 117 (235)
.+..|.||||.|+..|+.++++.|++.+.+ ....+..|.||||+|+..++. +++++|++.+.......+
T Consensus 42 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~--~~~~~Ll~~~~~~~~~~~--- 110 (241)
T 1k1a_A 42 YNNLRQTPLHLAVITTLPSVVRLLVTAGAS------PMALDRHGQTAAHLACEHRSP--TCLRALLDSAAPGTLDLE--- 110 (241)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHHSCTTSCCTT---
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCcccccc---
Confidence 455699999999999999999999998762 233466789999999999977 999999986652110001
Q ss_pred ccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCC-CCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCC
Q 044483 118 DKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKK 196 (235)
Q Consensus 118 ~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d-~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 196 (235)
..+..|.||||+|+..|+.+++++|++.+++. +..+ ..|.||||+|+..|+.+++++|++.+.+ ++.+|..
T Consensus 111 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~ 182 (241)
T 1k1a_A 111 ARNYDGLTALHVAVNTECQETVQLLLERGADI---DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-----VNAQMYS 182 (241)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCBCTT
T ss_pred ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc---ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCC
Confidence 12335899999999999999999999998876 6777 8899999999999999999999998754 8999999
Q ss_pred CCcHHHHHHhCCCC
Q 044483 197 GYTLLHHVADMKHY 210 (235)
Q Consensus 197 G~TpLHlAa~~g~~ 210 (235)
|+||||+|+..|+.
T Consensus 183 g~t~L~~A~~~~~~ 196 (241)
T 1k1a_A 183 GSSALHSASGRGLL 196 (241)
T ss_dssp SCBHHHHHHHHTCH
T ss_pred CCCHHHHHHHcCCH
Confidence 99999999999985
No 34
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=7.5e-27 Score=196.93 Aligned_cols=150 Identities=14% Similarity=0.095 Sum_probs=130.4
Q ss_pred cCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhc
Q 044483 36 STTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNY 115 (235)
Q Consensus 36 ~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~ 115 (235)
...+.+|.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..|+. +++++|++.++....
T Consensus 30 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~---- 97 (261)
T 2xai_A 30 NIITADHVSPLHEACLGGHLSCVKILLKHGAQ------VNGVTADWHTPLFNACVSGSW--DCVNLLLQHGASVQP---- 97 (261)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCH--HHHHHHHHTTCCSSC----
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCH--HHHHHHHHCCCCCCC----
Confidence 34556799999999999999999999998762 234467889999999999977 999999998775431
Q ss_pred ccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCC
Q 044483 116 KKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDK 195 (235)
Q Consensus 116 ~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 195 (235)
...|.||||+|+..|+.+++++|++.+++. +..|..|+||||+|+..|+.+++++|++.+.+ ++. |.
T Consensus 98 ----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~-~~ 164 (261)
T 2xai_A 98 ----ESDLASPIHEAARRGHVECVNSLIAYGGNI---DHKISHLGTPLYLACENQQRACVKKLLESGAD-----VNQ-GK 164 (261)
T ss_dssp ----SCTTCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC-----TTC-CB
T ss_pred ----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC---CcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC-----CCC-CC
Confidence 123889999999999999999999998876 89999999999999999999999999998764 664 89
Q ss_pred CCCcHHHHHHhCCCC
Q 044483 196 KGYTLLHHVADMKHY 210 (235)
Q Consensus 196 ~G~TpLHlAa~~g~~ 210 (235)
.|+||||+|+..|+.
T Consensus 165 ~g~t~Lh~A~~~~~~ 179 (261)
T 2xai_A 165 GQDSPLHAVARTASE 179 (261)
T ss_dssp TTBCHHHHHHHHTCH
T ss_pred CCCChHHHHHHcCCH
Confidence 999999999999995
No 35
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=1.2e-26 Score=198.66 Aligned_cols=146 Identities=14% Similarity=0.080 Sum_probs=83.4
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccc
Q 044483 40 SDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDK 119 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~ 119 (235)
.+|.||||+|+..|+.++++.|++.+. ..+..+..|.||||+|+..++. +++++|++.++....
T Consensus 90 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga------~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------- 153 (285)
T 3d9h_A 90 ADHVSPLHEACLGGHLSCVKILLKHGA------QVNGVTADWHTPLFNACVSGSW--DCVNLLLQHGASVQP-------- 153 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTC------CSSCCCTTCCCHHHHHHHHTCH--HHHHHHHHTTCCSSC--------
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHcCHH--HHHHHHHHCCCCCCC--------
Confidence 446666666666666666666666554 1122344555666666666654 666666665443321
Q ss_pred ccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCc
Q 044483 120 NWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYT 199 (235)
Q Consensus 120 ~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 199 (235)
...|.||||+|+..|+.+++++|++.+++. +..|..|+||||+|+..|+.+++++|++.+.+ ++ .|..|+|
T Consensus 154 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~-~~~~g~t 224 (285)
T 3d9h_A 154 ESDLASPIHEAARRGHVECVNSLIAYGGNI---DHKISHLGTPLYLACENQQRACVKKLLESGAD-----VN-QGKGQDS 224 (285)
T ss_dssp SCTTSCHHHHHHHHTCHHHHHHHHHTTCCT---TCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-----TT-CCBTTBC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-----CC-CCCCCCC
Confidence 112556666666666666666666655544 55566666666666666666666666655432 33 2556666
Q ss_pred HHHHHHhCCCC
Q 044483 200 LLHHVADMKHY 210 (235)
Q Consensus 200 pLHlAa~~g~~ 210 (235)
|||+|+..|+.
T Consensus 225 ~L~~A~~~~~~ 235 (285)
T 3d9h_A 225 PLHAVVRTASE 235 (285)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHcCCH
Confidence 66666666653
No 36
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=1.2e-26 Score=198.63 Aligned_cols=146 Identities=12% Similarity=0.042 Sum_probs=87.3
Q ss_pred CCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccc
Q 044483 41 DKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKN 120 (235)
Q Consensus 41 ~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~ 120 (235)
+|.||||.|+..|+.+++++|++.+++ .+..+..|.||||+|+..|+. +++++|++.+++... .+
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~d~~g~t~L~~A~~~g~~--~~v~~Ll~~ga~~~~-------~~ 125 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLD------DSQFDDKGNTALYYAVDSGNM--QTVKLFVKKNWRLMF-------YG 125 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHHCGGGGG-------CS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCcCCCCCcHHHHHHHcCCH--HHHHHHHhcCCCCCc-------cC
Confidence 456666666666666666665555441 122344556666666666654 666666665544321 11
Q ss_pred cCc-chHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCc
Q 044483 121 WAF-RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYT 199 (235)
Q Consensus 121 ~~g-~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 199 (235)
..| .||||+|+..|+.+++++|++.++... +. ..|+||||+|+..|+.+++++|++.+++ ++.+|..|+|
T Consensus 126 ~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~--~~g~t~L~~A~~~g~~~~v~~Ll~~gad-----~n~~~~~g~t 196 (285)
T 3kea_A 126 KTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--DL--AILLSCIHITIKNGHVDMMILLLDYMTS-----TNTNNSLLFI 196 (285)
T ss_dssp SSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC--CC--STHHHHHHHHHHTTCHHHHHHHHHHHHH-----TCTTCCCBCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCccc--cc--cCCccHHHHHHHcChHHHHHHHHHcCCC-----CCcccCCCCC
Confidence 224 566666666666666666666655432 11 1566777777777777777777766543 6777777777
Q ss_pred H-HHHHHhCCCC
Q 044483 200 L-LHHVADMKHY 210 (235)
Q Consensus 200 p-LHlAa~~g~~ 210 (235)
| ||+|+..|+.
T Consensus 197 ~~L~~A~~~~~~ 208 (285)
T 3kea_A 197 PDIKLAIDNKDI 208 (285)
T ss_dssp TTHHHHHHHTCH
T ss_pred hHHHHHHHcCCH
Confidence 6 7777777775
No 37
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=9.2e-27 Score=204.73 Aligned_cols=180 Identities=13% Similarity=0.120 Sum_probs=143.5
Q ss_pred CCCCccccccccCCCc-cccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChH
Q 044483 18 CLGDGEQNLEIFSPNP-ESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAG 96 (235)
Q Consensus 18 ~~~~~~~~~~~l~~~~-~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~ 96 (235)
+..++.+.++.|+... +....+..|.||||+|+..|+.+++++|++.++ ......|.||||+|+..|+.
T Consensus 28 a~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--------~~~~~~g~t~L~~A~~~g~~-- 97 (364)
T 3ljn_A 28 ARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGE--------VHSLWHGQKPIHLAVMANKT-- 97 (364)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC--------CCCCBTTBCHHHHHHHTTCH--
T ss_pred HHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC--------CccccCCCCHHHHHHHcCCH--
Confidence 3446677777777532 344455669999999999999999999998876 22345788999999999977
Q ss_pred HHHHHHHhc----CCcchhhhhc----------ccccccCcchHHHHHHHcC--CHHHHHHHHHhCCCccccccCCCCCC
Q 044483 97 ELVELFVKK----DCTNKAVHNY----------KKDKNWAFRLTLLFAASNG--ITEILKEIIHQHPQAILLDNLNEKEQ 160 (235)
Q Consensus 97 ~iv~~Ll~~----~~~~~~~~~~----------~~~~~~~g~TpLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~~~d~~g~ 160 (235)
++|++|++. +......... ....+..|.||||+|+..| +.++|++|++.+.+. +..|..|+
T Consensus 98 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~---~~~d~~g~ 174 (364)
T 3ljn_A 98 DLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP---TAKDKADE 174 (364)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT---TCCCTTSC
T ss_pred HHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC---cccCCCCC
Confidence 999999986 4433210000 0002335899999999999 999999999998776 89999999
Q ss_pred hHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 161 NILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 161 tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
||||+|+..|+.+++++|++.+......+++.+|..|+||||+||..|+.
T Consensus 175 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~ 224 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWE 224 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCH
Confidence 99999999999999999999876434445889999999999999999995
No 38
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=8.3e-27 Score=209.52 Aligned_cols=148 Identities=11% Similarity=0.116 Sum_probs=110.7
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccc
Q 044483 40 SDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDK 119 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~ 119 (235)
..|.||||.|+..|+.++++.|++.+++ .+..+..|.||||+|+..++. +++++|++.++..+. .
T Consensus 243 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~------~~~~~~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~-------~ 307 (437)
T 1n11_A 243 VQGVTPLHLAAQEGHAEMVALLLSKQAN------GNLGNKSGLTPLHLVAQEGHV--PVADVLIKHGVMVDA-------T 307 (437)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCC------TTCCCTTCCCHHHHHHHHTCH--HHHHHHHHHTCCTTC-------C
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCCC------CCCCCCCCCCHHHHHHHcCCH--HHHHHHHhCCccCCC-------C
Confidence 3456666666666666666655554431 122355677888888888766 888888876654431 2
Q ss_pred ccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCc
Q 044483 120 NWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYT 199 (235)
Q Consensus 120 ~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 199 (235)
+..|+||||+|+..|+.++|++|++.+++. +.+|..|+||||+|+..|+.++|++|++.+++ ++.+|.+|+|
T Consensus 308 ~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~---n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~-----~~~~~~~g~t 379 (437)
T 1n11_A 308 TRMGYTPLHVASHYGNIKLVKFLLQHQADV---NAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS-----PNEVSSDGTT 379 (437)
T ss_dssp CSSCCCHHHHHHHSSCSHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----SCCCCSSSCC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCC---CCCCCCCCCHHHHHHHCChHHHHHHHHHCcCC-----CCCCCCCCCC
Confidence 334889999999999999999999887776 88888899999999999999999999988764 8888899999
Q ss_pred HHHHHHhCCCC
Q 044483 200 LLHHVADMKHY 210 (235)
Q Consensus 200 pLHlAa~~g~~ 210 (235)
|||+|++.|+.
T Consensus 380 ~l~~A~~~g~~ 390 (437)
T 1n11_A 380 PLAIAKRLGYI 390 (437)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHcCcH
Confidence 99999998873
No 39
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=6.6e-27 Score=199.39 Aligned_cols=146 Identities=14% Similarity=0.165 Sum_probs=107.3
Q ss_pred CchHHHHHHhcCcHH-HHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccc
Q 044483 42 KISIISLGLGKGNML-KAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKN 120 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~-~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~ 120 (235)
|.||||.|+..++.+ +++.|+..+.+ .+..+..|.||||+|+..|+. ++|++|++.+++... .+
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gad------vn~~d~~G~TpLh~A~~~g~~--~~v~~Ll~~~a~~~~-------~~ 116 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLG------VNVTSQDGSSPLHVAALHGRA--DLIPLLLKHGANAGA-------RN 116 (269)
T ss_dssp -----------------------CCCC------TTCCCTTSCCHHHHHHHTTCT--THHHHHHHTTCCTTC-------CC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHcCcH--HHHHHHHhcCCCcCc-------cC
Confidence 555555555554432 34444444331 123366789999999999988 999999998775542 23
Q ss_pred cCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcH
Q 044483 121 WAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTL 200 (235)
Q Consensus 121 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 200 (235)
..|.||+|+|+..|+.+++++|++.++++ +.+|..|+||||+||..|+.++|++|++.+++ ++.+|..|+||
T Consensus 117 ~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~---n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad-----vn~~~~~g~t~ 188 (269)
T 4b93_B 117 ADQAVPLHLACQQGHFQVVKCLLDSNAKP---NKKDLSGNTPLIYACSGGHHELVALLLQHGAS-----INASNNKGNTA 188 (269)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCS---CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC-----TTCBCTTSCBH
T ss_pred CCCCCccccccccChHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCccccCCCcH
Confidence 34899999999999999999999988876 89999999999999999999999999998764 99999999999
Q ss_pred HHHHHhCCCC
Q 044483 201 LHHVADMKHY 210 (235)
Q Consensus 201 LHlAa~~g~~ 210 (235)
||+||..|+.
T Consensus 189 Lh~A~~~g~~ 198 (269)
T 4b93_B 189 LHEAVIEKHV 198 (269)
T ss_dssp HHHHHHTTCH
T ss_pred HHHHHHcCCH
Confidence 9999999995
No 40
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=6.5e-27 Score=199.54 Aligned_cols=153 Identities=16% Similarity=0.165 Sum_probs=111.5
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcc-
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYK- 116 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~- 116 (235)
.+.+|.||||.|+..|+.+++++|++.+++ .+..+..|.||||+|+..|+. ++|++|++.++.........
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~g~tpL~~A~~~g~~--~~v~~Ll~~g~~~~~~~~~g~ 140 (299)
T 1s70_B 69 ANVDGLTALHQACIDDNVDMVKFLVENGAN------INQPDNEGWIPLHAAASCGYL--DIAEYLISQGAHVGAVNSEGD 140 (299)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCH--HHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCcHHHHHHHcCCH--HHHHHHHhCCCCCCCcCCCCC
Confidence 345688888888888888888888887762 233456678888888888876 88888888665432110000
Q ss_pred ----------------------------------------------------cccccCcchHHHHHHHcCCHHHHHHHHH
Q 044483 117 ----------------------------------------------------KDKNWAFRLTLLFAASNGITEILKEIIH 144 (235)
Q Consensus 117 ----------------------------------------------------~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~ 144 (235)
...+..|.||||+||..|+.+++++|++
T Consensus 141 t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 220 (299)
T 1s70_B 141 TPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ 220 (299)
T ss_dssp CHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred CHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 0011247788888888888888888888
Q ss_pred hCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHh
Q 044483 145 QHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVAD 206 (235)
Q Consensus 145 ~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~ 206 (235)
.+++. +.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|++
T Consensus 221 ~g~d~---~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad-----~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 221 ARYDV---NIKDYDGWTPLHAAAHWGKEEACRILVENLCD-----MEAVNKVGQTAFDVADE 274 (299)
T ss_dssp TTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCTTTSCCS
T ss_pred cCCCC---CCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHH
Confidence 77665 77788888888888888888888888887653 77888888888888854
No 41
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=9e-27 Score=197.07 Aligned_cols=168 Identities=16% Similarity=0.112 Sum_probs=129.8
Q ss_pred CCCCCchHHHHHHhc---CcHHHHHHHHhhChhh--HHHHhccc---cccCCCChhhHHHhcCCChHHHHHHHHhcCCcc
Q 044483 38 TSSDKISIISLGLGK---GNMLKAKKLVDFSAGE--LNELLLKK---DCTNKGNMIKAKKFVDFSAGELVELFVKKDCTN 109 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~---g~~~~~~~ll~~~~~~--~~~~l~~~---~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~ 109 (235)
.+..|.||||.|+.. |+.+++++|++.+++. +..++... .+..|.||||+|+..|+. ++|++|++.+++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~--~~v~~Ll~~ga~~ 127 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNM--TLVTLLVENGADV 127 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCH--HHHHHHHHTTCCT
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCH--HHHHHHHHCCCCc
Confidence 356799999999987 9999999999986521 11112211 245789999999999977 9999999988765
Q ss_pred hhhhhc-------ccccccCcchHHHHHHHcCCHHHHHHHHH---hCCCccccccCCCCCChHHHHHHHcCC--------
Q 044483 110 KAVHNY-------KKDKNWAFRLTLLFAASNGITEILKEIIH---QHPQAILLDNLNEKEQNILHVSVKRRQ-------- 171 (235)
Q Consensus 110 ~~~~~~-------~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~---~~~~~~~~~~~d~~g~tpLh~Av~~g~-------- 171 (235)
...... ....+..|.||||+|+..|+.+++++|++ .+.+. +.+|..|+||||+|+..|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~---~~~d~~g~tpLh~A~~~~~~~~~~~~~ 204 (273)
T 2pnn_A 128 QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI---SARDSVGNTVLHALVEVADNTVDNTKF 204 (273)
T ss_dssp TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT---TCCCTTSCCHHHHHHHHCCSCHHHHHH
T ss_pred CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc---eeeCCCCCcHHHHHHHccCcchhHHHH
Confidence 421110 00001248999999999999999999999 66665 8999999999999999998
Q ss_pred -HHHHHHHHHhccccc--cccccCCCCCCCcHHHHHHhCCCC
Q 044483 172 -YKVFELIMKDMRLSV--PKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 172 -~~iv~~Ll~~~~~~~--~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
.+++++|++.+++.. ...++.+|..|+||||+|++.|+.
T Consensus 205 ~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 205 VTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence 799999999876400 001135899999999999999996
No 42
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=2.1e-26 Score=190.12 Aligned_cols=170 Identities=12% Similarity=0.121 Sum_probs=134.8
Q ss_pred CCccccccccCCCc-cccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHH
Q 044483 20 GDGEQNLEIFSPNP-ESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGEL 98 (235)
Q Consensus 20 ~~~~~~~~~l~~~~-~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~i 98 (235)
.+..+.++.|+..+ .....+.+|.||||.|+..|+.++++.|++.+. ..+..+..|.||||+|+..++. ++
T Consensus 21 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~--~~ 92 (237)
T 3b7b_A 21 AGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGA------LVDPKDAEGSTCLHLAAKKGHY--EV 92 (237)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC------CCCCCCTTSCCHHHHHHHTTCH--HH
T ss_pred cCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCC------CCCCCCCCCCcHHHHHHHcCCH--HH
Confidence 35566677776543 334445668999999999999999988888766 2233466788999999998876 99
Q ss_pred HHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHH
Q 044483 99 VELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELI 178 (235)
Q Consensus 99 v~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~L 178 (235)
+++|++.+..... ..+..|.||||+|+..|+.+++++|++.+++. +..|..|.||||+|+..|+.+++++|
T Consensus 93 ~~~Ll~~~~~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~L 163 (237)
T 3b7b_A 93 VQYLLSNGQMDVN------CQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI---NIRDNEENICLHWAAFSGCVDIAEIL 163 (237)
T ss_dssp HHHHHTTTCCCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred HHHHHhCCCCCcc------cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 9999986632221 12234889999999999999999999988776 88899999999999999999999999
Q ss_pred HHhccccccccccCCCCCCCcHHHHHHhCCCCC
Q 044483 179 MKDMRLSVPKWASRIDKKGYTLLHHVADMKHYK 211 (235)
Q Consensus 179 l~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~~ 211 (235)
++.+.+ ++.+|..|+||||+|+..|+..
T Consensus 164 l~~g~~-----~~~~~~~g~t~L~~A~~~~~~~ 191 (237)
T 3b7b_A 164 LAAKCD-----LHAVNIHGDSPLHIAARENRYD 191 (237)
T ss_dssp HTTTCC-----TTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHcCCC-----CCCcCCCCCCHHHHHHHhCCHh
Confidence 988754 8889999999999999999863
No 43
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=3.2e-27 Score=188.04 Aligned_cols=148 Identities=18% Similarity=0.128 Sum_probs=127.9
Q ss_pred CCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccc
Q 044483 41 DKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKN 120 (235)
Q Consensus 41 ~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~ 120 (235)
++.+|||.|+..|+.++++.|++..+ ...+..+..|.||||+|+..++. +++++|++.++.... .+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~~ 69 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTE-----NDLNQGDDHGFSPLHWACREGRS--AVVEMLIMRGARINV-------MN 69 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTT-----SCTTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-------CC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCc-----ccccccCCCCCCHHHHHHHcCcH--HHHHHHHHcCCCCCC-------cC
Confidence 57899999999999999999998765 23345577889999999999977 999999998776542 23
Q ss_pred cCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcH
Q 044483 121 WAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTL 200 (235)
Q Consensus 121 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 200 (235)
..|.||||+|+..|+.+++++|++.+++. +..|..|+||||+|+..|+.+++++|++.+++ ++.+|..|.||
T Consensus 70 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~tp 141 (179)
T 3f6q_A 70 RGDDTPLHLAASHGHRDIVQKLLQYKADI---NAVNEHGNVPLHYACFWGQDQVAEDLVANGAL-----VSICNKYGEMP 141 (179)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----SSBCCTTSCCG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----cchhccCCCCc
Confidence 34899999999999999999999998776 89999999999999999999999999998764 89999999999
Q ss_pred HHHHHhCCCC
Q 044483 201 LHHVADMKHY 210 (235)
Q Consensus 201 LHlAa~~g~~ 210 (235)
||+|+..|+.
T Consensus 142 l~~A~~~~~~ 151 (179)
T 3f6q_A 142 VDKAKAPLRE 151 (179)
T ss_dssp GGGSCHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998774
No 44
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=3e-26 Score=196.10 Aligned_cols=151 Identities=9% Similarity=0.043 Sum_probs=130.2
Q ss_pred cCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhc
Q 044483 36 STTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNY 115 (235)
Q Consensus 36 ~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~ 115 (235)
...+.+|+||||.|+..|+.++++.|++.+. ..+..+..|.||||+|+..|+. ++|++|++.++....
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~ga~~~~---- 120 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGW------AVNIITADHVSPLHEACLGGHL--SCVKILLKHGAQVNG---- 120 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC------CSCEECTTCCCHHHHHHHTTCH--HHHHHHHHTTCCSSC----
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCC------CCCCcCCCCCCHHHHHHHCCcH--HHHHHHHHCCCCCCC----
Confidence 3456679999999999999999999999876 2244567889999999999977 999999998765531
Q ss_pred ccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCC
Q 044483 116 KKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDK 195 (235)
Q Consensus 116 ~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 195 (235)
.+..|+||||+|+..|+.+++++|++.+++. +. +..|.||||+|+..|+.+++++|++.+.+ ++.+|.
T Consensus 121 ---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~d~ 188 (285)
T 3d9h_A 121 ---VTADWHTPLFNACVSGSWDCVNLLLQHGASV---QP-ESDLASPIHEAARRGHVECVNSLIAYGGN-----IDHKIS 188 (285)
T ss_dssp ---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS---SC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCBT
T ss_pred ---CCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC---CC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCcCC
Confidence 2334899999999999999999999988775 43 44599999999999999999999998754 899999
Q ss_pred CCCcHHHHHHhCCCC
Q 044483 196 KGYTLLHHVADMKHY 210 (235)
Q Consensus 196 ~G~TpLHlAa~~g~~ 210 (235)
.|+||||+|+..|+.
T Consensus 189 ~g~t~L~~A~~~~~~ 203 (285)
T 3d9h_A 189 HLGTPLYLACENQQR 203 (285)
T ss_dssp TTBCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCcH
Confidence 999999999999996
No 45
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=3.1e-26 Score=205.83 Aligned_cols=149 Identities=15% Similarity=0.211 Sum_probs=121.9
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccc
Q 044483 39 SSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKD 118 (235)
Q Consensus 39 ~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~ 118 (235)
..+|.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..|+. ++|++|++.++....
T Consensus 209 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~------- 273 (437)
T 1n11_A 209 AWNGYTPLHIAAKQNQVEVARSLLQYGGS------ANAESVQGVTPLHLAAQEGHA--EMVALLLSKQANGNL------- 273 (437)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCH--HHHHHHHTTTCCTTC-------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHCCCH--HHHHHHHhcCCCCCC-------
Confidence 34477777777777777777777766551 233356778999999998877 999999987765431
Q ss_pred cccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCC
Q 044483 119 KNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGY 198 (235)
Q Consensus 119 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 198 (235)
.+..|.||||+|+..|+.+++++|++.+.+. +.+|..|+||||+|+..|+.++|++|++.+++ ++.+|..|+
T Consensus 274 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-----~n~~~~~g~ 345 (437)
T 1n11_A 274 GNKSGLTPLHLVAQEGHVPVADVLIKHGVMV---DATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-----VNAKTKLGY 345 (437)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT---TCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCC-----TTCCCTTSC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCccC---CCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-----CCCCCCCCC
Confidence 2334899999999999999999999998776 88999999999999999999999999998764 899999999
Q ss_pred cHHHHHHhCCCC
Q 044483 199 TLLHHVADMKHY 210 (235)
Q Consensus 199 TpLHlAa~~g~~ 210 (235)
||||+|++.|+.
T Consensus 346 t~L~~A~~~g~~ 357 (437)
T 1n11_A 346 SPLHQAAQQGHT 357 (437)
T ss_dssp CHHHHHHHTTCH
T ss_pred CHHHHHHHCChH
Confidence 999999999995
No 46
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=4.4e-26 Score=197.30 Aligned_cols=173 Identities=13% Similarity=0.129 Sum_probs=135.7
Q ss_pred ccccccccCCCc-cccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHH
Q 044483 22 GEQNLEIFSPNP-ESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVE 100 (235)
Q Consensus 22 ~~~~~~~l~~~~-~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~ 100 (235)
..+.++.|+..+ .....+..|.||||.|+..|+.++++.|++.+++ .+..+..|.||||+|+..++. ++++
T Consensus 70 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~--~~v~ 141 (351)
T 3utm_A 70 RVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC------VNAMDLWQFTPLHEAASKNRV--EVCS 141 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCH--HHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCH--HHHH
Confidence 344455555432 2333456699999999999999999999988762 233466788999999999977 9999
Q ss_pred HHHhcCCcchhhhhc-----------------------------------------------ccccccCcchHHHHHHHc
Q 044483 101 LFVKKDCTNKAVHNY-----------------------------------------------KKDKNWAFRLTLLFAASN 133 (235)
Q Consensus 101 ~Ll~~~~~~~~~~~~-----------------------------------------------~~~~~~~g~TpLh~Aa~~ 133 (235)
+|++.++........ ....+..|.||||+|+..
T Consensus 142 ~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~ 221 (351)
T 3utm_A 142 LLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVAS 221 (351)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHC
T ss_pred HHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHH
Confidence 999977654321000 001123488999999999
Q ss_pred ---CCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 134 ---GITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 134 ---g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
+..+++++|++.+.+. +.+|..|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.
T Consensus 222 ~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~n~~d~~g~t~L~~A~~~~~~ 293 (351)
T 3utm_A 222 LHPKRKQVAELLLRKGANV---NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK-----MNALDSLGQTALHRAALAGHL 293 (351)
T ss_dssp CSTTHHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTCH
T ss_pred hCccHHHHHHHHHHcCCCc---CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCcCCCCCCHHHHHHHcCcH
Confidence 6689999999988776 88999999999999999999999999998754 899999999999999999995
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=3e-26 Score=184.63 Aligned_cols=150 Identities=15% Similarity=0.196 Sum_probs=129.8
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccc
Q 044483 40 SDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDK 119 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~ 119 (235)
..+.||||.|+..|+.+.++.++..++ ...+..+..|.||||+|+..++. +++++|++.+++... .
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~ 68 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTT-----YQVDEVDTEGNTPLNIAVHNNDI--EIAKALIDRGADINL-------Q 68 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTT-----CCTTCCCTTSCCHHHHHHHHTCH--HHHHHHHHTTCCTTC-------C
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCC-----CCCCCCCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCC-------C
Confidence 358999999999999999999988765 23344567889999999999977 999999998876542 2
Q ss_pred ccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCc
Q 044483 120 NWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYT 199 (235)
Q Consensus 120 ~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 199 (235)
+..|.||||+|+..|+.+++++|++.++..+ +..|..|.||||+|+..|+.+++++|++.+. .+++.+|..|+|
T Consensus 69 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~~g~t 142 (201)
T 3hra_A 69 NSISDSPYLYAGAQGRTEILAYMLKHATPDL--NKHNRYGGNALIPAAEKGHIDNVKLLLEDGR----EDIDFQNDFGYT 142 (201)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT--TCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC----CCTTCCCTTSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccCccc--ccccCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCcCCCCCCCCC
Confidence 3348999999999999999999997776655 8999999999999999999999999999872 248999999999
Q ss_pred HHHHHHhCCC
Q 044483 200 LLHHVADMKH 209 (235)
Q Consensus 200 pLHlAa~~g~ 209 (235)
|||+|+..|+
T Consensus 143 ~L~~A~~~~~ 152 (201)
T 3hra_A 143 ALIEAVGLRE 152 (201)
T ss_dssp HHHHHHHSSC
T ss_pred HHHHHHHhcc
Confidence 9999999987
No 48
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.94 E-value=1.1e-26 Score=185.30 Aligned_cols=130 Identities=19% Similarity=0.213 Sum_probs=112.6
Q ss_pred CCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcc
Q 044483 37 TTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYK 116 (235)
Q Consensus 37 ~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~ 116 (235)
..+.+|+||||.|+..++.++++.|++.+.+ .+..+..|.||||+|+..|+. ++|++|++.+++.+.
T Consensus 32 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad------~~~~d~~g~TpLh~A~~~g~~--~~v~~Ll~~gadvn~----- 98 (169)
T 4gpm_A 32 ASDSDGRTPLHHAAENGHKEVVKLLISKGAD------VNAKDSDGRTPLHHAAENGHK--EVVKLLISKGADVNA----- 98 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-----
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHhcccc------hhhhccCCCCHHHHHHHcCCH--HHHHHHHHCcCCCCC-----
Confidence 4556799999999999999999999998872 244577889999999999987 999999998876542
Q ss_pred cccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccc
Q 044483 117 KDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRL 184 (235)
Q Consensus 117 ~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~ 184 (235)
.+..|+||||+||..|+.++|++|++.+++. +.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 99 --~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~---~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 99 --KDSDGRTPLHHAAENGHKEVVKLLISKGADV---NTSDSDGRTPLDLAREHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp --CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHTC---
T ss_pred --CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc---cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 2335999999999999999999999998886 89999999999999999999999999999874
No 49
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=2.6e-27 Score=202.81 Aligned_cols=147 Identities=9% Similarity=0.053 Sum_probs=126.5
Q ss_pred CCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcc
Q 044483 37 TTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYK 116 (235)
Q Consensus 37 ~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~ 116 (235)
..+.+|.||||.|+..|+.++++.|++.+++ +. ..+|.||||+|+..|+. ++|++|++.+++...
T Consensus 26 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~---~~~g~t~L~~A~~~g~~--~~v~~Ll~~ga~~~~----- 90 (285)
T 3kea_A 26 KADVHGHSASYYAIADNNVRLVCTLLNAGAL-----KN---LLENEFPLHQAATLEDT--KIVKILLFSGLDDSQ----- 90 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-----GS---CCTTCCHHHHHTTSSSC--HHHHHHHHTTCCTTC-----
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----CC---CCCCCCHHHHHHHcCCH--HHHHHHHHCCCCCCC-----
Confidence 4556799999999999999999999998872 22 22589999999999988 999999998876542
Q ss_pred cccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCC-ChHHHHHHHcCCHHHHHHHHHhccccccccccCCCC
Q 044483 117 KDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE-QNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDK 195 (235)
Q Consensus 117 ~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g-~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 195 (235)
.+..|+||||+|+..|+.+++++|++.+++. +..|..| .||||+|+..|+.+++++|++.+.. ..|.
T Consensus 91 --~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~ 158 (285)
T 3kea_A 91 --FDDKGNTALYYAVDSGNMQTVKLFVKKNWRL---MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS-------TFDL 158 (285)
T ss_dssp --CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG---GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT-------TCCC
T ss_pred --cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC---CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc-------cccc
Confidence 2334899999999999999999999998776 8899999 8999999999999999999998742 2343
Q ss_pred -CCCcHHHHHHhCCCC
Q 044483 196 -KGYTLLHHVADMKHY 210 (235)
Q Consensus 196 -~G~TpLHlAa~~g~~ 210 (235)
.|+||||+|+..|+.
T Consensus 159 ~~g~t~L~~A~~~g~~ 174 (285)
T 3kea_A 159 AILLSCIHITIKNGHV 174 (285)
T ss_dssp STHHHHHHHHHHTTCH
T ss_pred cCCccHHHHHHHcChH
Confidence 899999999999995
No 50
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.94 E-value=4.6e-26 Score=202.10 Aligned_cols=164 Identities=11% Similarity=0.060 Sum_probs=130.3
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCC-ChHHHHHHHHhcCCcchhhhh-c
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDF-SAGELVELFVKKDCTNKAVHN-Y 115 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~-~~~~iv~~Ll~~~~~~~~~~~-~ 115 (235)
.+..|.||||.|+..|+.++++.|++.+.. ....+..+..|.||||+|+..+. ...+++++|++.++....... .
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~ 271 (373)
T 2fo1_E 195 YNKSERSALHQAAANRDFGMMVYMLNSTKL---KGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR 271 (373)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHTTSHHH---HHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGG
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHhcCcc---ccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccc
Confidence 445688999999999999999888876520 01223446788999999998862 244999999998775542100 0
Q ss_pred ccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCC
Q 044483 116 KKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDK 195 (235)
Q Consensus 116 ~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 195 (235)
....+..|+||||+||..|+.++|++|++.++..+ +.+|..|+||||+|+..|+.++|++|++.+++ ++.+|.
T Consensus 272 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-----~~~~d~ 344 (373)
T 2fo1_E 272 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK--DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-----VEAVDA 344 (373)
T ss_dssp TSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----SSCCCS
T ss_pred cCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc--cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----ccCCCC
Confidence 01123358999999999999999999999875555 89999999999999999999999999998764 999999
Q ss_pred CCCcHHHHHHhCCCCC
Q 044483 196 KGYTLLHHVADMKHYK 211 (235)
Q Consensus 196 ~G~TpLHlAa~~g~~~ 211 (235)
.|+||||+|+..|+..
T Consensus 345 ~g~t~l~~A~~~g~~~ 360 (373)
T 2fo1_E 345 TDHTARQLAQANNHHN 360 (373)
T ss_dssp SSCCHHHHHHHTTCHH
T ss_pred CCCCHHHHHHHcCCHH
Confidence 9999999999999963
No 51
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=1.1e-25 Score=189.15 Aligned_cols=151 Identities=13% Similarity=0.095 Sum_probs=120.1
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccc---------cccCCCChhhHHHhcCCChHHHHHHHHhc-CCc
Q 044483 39 SSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKK---------DCTNKGNMIKAKKFVDFSAGELVELFVKK-DCT 108 (235)
Q Consensus 39 ~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~---------~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~-~~~ 108 (235)
+..|.||||.|+..|+.++++.|++.+.+ +... .+..|.||||+|+..++. +++++|++. ++.
T Consensus 102 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~~~~~ 174 (285)
T 1wdy_A 102 DFYGFTAFMEAAVYGKVKALKFLYKRGAN-----VNLRRKTKEDQERLRKGGATALMDAAEKGHV--EVLKILLDEMGAD 174 (285)
T ss_dssp CTTCCBHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH--HHHHHHHHTSCCC
T ss_pred CcccCCHHHHHHHhCCHHHHHHHHHhCCC-----cccccccHHHHHhhccCCCcHHHHHHHcCCH--HHHHHHHHhcCCC
Confidence 34466666666666666666666665441 1111 045678999999999977 999999985 654
Q ss_pred chhhhhcccccccCcchHHHHHHHcCC----HHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHH-hcc
Q 044483 109 NKAVHNYKKDKNWAFRLTLLFAASNGI----TEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMK-DMR 183 (235)
Q Consensus 109 ~~~~~~~~~~~~~~g~TpLh~Aa~~g~----~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~-~~~ 183 (235)
... .+..|+||||+|+..|+ .+++++|++.+.+. +.+|..|+||||+|+..|+.+++++|++ .+.
T Consensus 175 ~~~-------~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~ 244 (285)
T 1wdy_A 175 VNA-------CDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV---NVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 244 (285)
T ss_dssp TTC-------CCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS---SCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSC
T ss_pred CCc-------cCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCC---CCcCCCCCcHHHHHHHcCCHHHHHHHHhccCC
Confidence 431 23348999999999999 99999999988876 8999999999999999999999999998 443
Q ss_pred ccccccccCCCCCCCcHHHHHHhCCCCC
Q 044483 184 LSVPKWASRIDKKGYTLLHHVADMKHYK 211 (235)
Q Consensus 184 ~~~~~~~~~~d~~G~TpLHlAa~~g~~~ 211 (235)
+++.+|..|+||||+|++.|+.+
T Consensus 245 -----~~~~~~~~g~t~l~~A~~~~~~~ 267 (285)
T 1wdy_A 245 -----EINDTDSDGKTALLLAVELKLKK 267 (285)
T ss_dssp -----CTTCCCTTSCCHHHHHHHTTCHH
T ss_pred -----CccccCCCCCcHHHHHHHcCcHH
Confidence 48999999999999999999863
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=1.8e-26 Score=193.29 Aligned_cols=152 Identities=12% Similarity=0.066 Sum_probs=120.9
Q ss_pred CchHHHHHHhcCcHHHH----HHHHhhChhhHHHHhcc---ccccCCCChhhHHHhc---CCChHHHHHHHHhcCCcchh
Q 044483 42 KISIISLGLGKGNMLKA----KKLVDFSAGELNELLLK---KDCTNKGNMIKAKKFV---DFSAGELVELFVKKDCTNKA 111 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~~~----~~ll~~~~~~~~~~l~~---~~~~~~~t~Lh~A~~~---~~~~~~iv~~Ll~~~~~~~~ 111 (235)
|+||||.|+..|+.+.+ ++++..+. .+.. ..+..|.||||+|+.. |+. ++|++|++.++....
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~-----~i~~~~~~~d~~g~t~L~~A~~~~~~g~~--~~v~~Ll~~g~~~~~ 74 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSK-----YLTDSAYTEGSTGKTCLMKAVLNLQDGVN--ACIMPLLQIDKDSGN 74 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTC-----CTTSGGGSBTTTTBCHHHHHHHTCBTTBC--TTHHHHHHHHHHTTC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCC-----CcccccccCCCCCCCHHHHHHHccccchH--HHHHHHHhcCCcccc
Confidence 89999999999999744 55555554 1211 1467889999999998 888 999999986654321
Q ss_pred hh---hc-ccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCC-------------CChHHHHHHHcCCHHH
Q 044483 112 VH---NY-KKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEK-------------EQNILHVSVKRRQYKV 174 (235)
Q Consensus 112 ~~---~~-~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~-------------g~tpLh~Av~~g~~~i 174 (235)
.. +. ..+.+..|+||||+|+..|+.+++++|++.+++. +..|.. |+||||+|+..|+.++
T Consensus 75 ~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~ 151 (256)
T 2etb_A 75 PKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV---HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDV 151 (256)
T ss_dssp SSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHH
T ss_pred hhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC---CcccccccccccccccccCCCCHHHHHHHcCCHHH
Confidence 10 00 0012235999999999999999999999998776 777776 9999999999999999
Q ss_pred HHHHHH---hccccccccccCCCCCCCcHHHHHHhCC
Q 044483 175 FELIMK---DMRLSVPKWASRIDKKGYTLLHHVADMK 208 (235)
Q Consensus 175 v~~Ll~---~~~~~~~~~~~~~d~~G~TpLHlAa~~g 208 (235)
+++|++ .++ +++.+|.+|+||||+|+..|
T Consensus 152 v~~Ll~~~~~ga-----~~n~~d~~g~TpLh~A~~~~ 183 (256)
T 2etb_A 152 VTYLLENPHQPA-----SLEATDSLGNTVLHALVMIA 183 (256)
T ss_dssp HHHHHHCSSCCC-----CTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHHhccccCC-----CcCccCCCCCCHHHHHHHcc
Confidence 999999 665 49999999999999999943
No 53
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=5.7e-26 Score=193.70 Aligned_cols=149 Identities=17% Similarity=0.197 Sum_probs=126.8
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccc
Q 044483 39 SSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKD 118 (235)
Q Consensus 39 ~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~ 118 (235)
..+|.||||.||..|+.++++.|++.+.+ .+..+..|.||||+|+..|+. ++|++|++.++....
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~ga~~~~------- 101 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGAD------INYANVDGLTALHQACIDDNV--DMVKFLVENGANINQ------- 101 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCC------TTCBCTTCCBHHHHHHHTTCH--HHHHHHHHTTCCTTC-------
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHcCCH--HHHHHHHHCCCCCCC-------
Confidence 34689999999999999999999998872 234567789999999999977 999999998876542
Q ss_pred cccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccC-------------------------------------------
Q 044483 119 KNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNL------------------------------------------- 155 (235)
Q Consensus 119 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~------------------------------------------- 155 (235)
.+..|+||||+|+..|+.++|++|++.+++. +..
T Consensus 102 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 178 (299)
T 1s70_B 102 PDNEGWIPLHAAASCGYLDIAEYLISQGAHV---GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML 178 (299)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH
Confidence 2334899999999999999999999987654 333
Q ss_pred -----------------CCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 156 -----------------NEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 156 -----------------d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.
T Consensus 179 ~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-----~~~~d~~g~tpL~~A~~~~~~ 245 (299)
T 1s70_B 179 RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-----VNIKDYDGWTPLHAAAHWGKE 245 (299)
T ss_dssp HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-----TTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-----CCCcCCCCCcHHHHHHhcCCH
Confidence 34688999999999999999999998754 899999999999999999994
No 54
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=2.1e-25 Score=187.38 Aligned_cols=192 Identities=13% Similarity=0.098 Sum_probs=120.2
Q ss_pred cHHHHHHHHHhhCCCCCC-----------------ccccccccCCCc-cccCCCCCCchHHHHHHhcCcHHHHHHHHhhC
Q 044483 4 NADKLLKMLVKETPCLGD-----------------GEQNLEIFSPNP-ESSTTSSDKISIISLGLGKGNMLKAKKLVDFS 65 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~~l~~~~-~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~ 65 (235)
+.-++|++|++..+.+.. ..+.++.|+..+ .....+.+|.||||.|+..|+.++++.|++.+
T Consensus 16 g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (285)
T 1wdy_A 16 EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 445788999887654322 222233333222 22233445677777777777777777766665
Q ss_pred hhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcc---cccccCcchHHHHHHHcCCHHHHHHH
Q 044483 66 AGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYK---KDKNWAFRLTLLFAASNGITEILKEI 142 (235)
Q Consensus 66 ~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~---~~~~~~g~TpLh~Aa~~g~~~iv~~L 142 (235)
.+ .+..+..|.||||+|+..++. +++++|++.++......... ...+..|.||||+|+..|+.+++++|
T Consensus 96 ~~------~~~~~~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 167 (285)
T 1wdy_A 96 AD------VNECDFYGFTAFMEAAVYGKV--KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL 167 (285)
T ss_dssp CC------TTCBCTTCCBHHHHHHHTTCH--HHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHH
T ss_pred CC------CCccCcccCCHHHHHHHhCCH--HHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHH
Confidence 41 123345566777777777755 77777777655433110000 00023467777777777777777777
Q ss_pred HHhCCCccccccCCCCCChHHHHHHHcCC----HHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 143 IHQHPQAILLDNLNEKEQNILHVSVKRRQ----YKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 143 l~~~~~~~~~~~~d~~g~tpLh~Av~~g~----~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
++..+..+ +..|..|+||||+|+..++ .+++++|++.+.+ ++.+|..|+||||+|++.|+.
T Consensus 168 l~~~~~~~--~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~ 232 (285)
T 1wdy_A 168 LDEMGADV--NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-----VNVRGERGKTPLILAVEKKHL 232 (285)
T ss_dssp HHTSCCCT--TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-----SSCCCTTSCCHHHHHHHTTCH
T ss_pred HHhcCCCC--CccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC-----CCCcCCCCCcHHHHHHHcCCH
Confidence 77655566 7777777777777777777 7777777776643 777778888888888888776
No 55
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=1.2e-26 Score=196.30 Aligned_cols=163 Identities=12% Similarity=0.108 Sum_probs=125.3
Q ss_pred CCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhc---cccccCCCChhhHHHhc---CCChHHHHHHHHhcCCcch
Q 044483 37 TTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLL---KKDCTNKGNMIKAKKFV---DFSAGELVELFVKKDCTNK 110 (235)
Q Consensus 37 ~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~---~~~~~~~~t~Lh~A~~~---~~~~~~iv~~Ll~~~~~~~ 110 (235)
..+..|+||||.|+..|+.++++.|++...+.-. .+. ...+..|.||||+|+.. |+. ++|++|++.++...
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~~~~~~~~g~tpL~~A~~~~~~g~~--~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKK-RLTDSEFKDPETGKTCLLKAMLNLHNGQN--DTIALLLDVARKTD 84 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCC-CTTSGGGSCTTTCCCHHHHHHHSCBTTBC--HHHHHHHHHHHHTT
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhccc-ccCCcccccCcCCCCHHHHHHHHHhcCCh--HHHHHHHHhhcccc
Confidence 3456699999999999999999888864320000 010 02256789999999986 777 99999999765321
Q ss_pred hh---hhc-ccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCC--------------CCChHHHHHHHcCCH
Q 044483 111 AV---HNY-KKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE--------------KEQNILHVSVKRRQY 172 (235)
Q Consensus 111 ~~---~~~-~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~--------------~g~tpLh~Av~~g~~ 172 (235)
.. .+. ....+..|+||||+|+..|+.++|++|++.+++. +..+. .|+||||+|+..|+.
T Consensus 85 ~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 161 (273)
T 2pnn_A 85 SLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV---QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL 161 (273)
T ss_dssp CHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH
T ss_pred chhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc---CccccccccccccccccccCCCCHHHHHHHcCCH
Confidence 10 010 0112335999999999999999999999998776 77776 799999999999999
Q ss_pred HHHHHHHH---hccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 173 KVFELIMK---DMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 173 ~iv~~Ll~---~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
+++++|++ .+. +++.+|.+|+||||+|+..|+.
T Consensus 162 ~~v~~Ll~~~~~ga-----d~~~~d~~g~tpLh~A~~~~~~ 197 (273)
T 2pnn_A 162 AIVKFLLQNSWQPA-----DISARDSVGNTVLHALVEVADN 197 (273)
T ss_dssp HHHHHHHHCSSCCC-----CTTCCCTTSCCHHHHHHHHCCS
T ss_pred HHHHHHHhcccCCC-----CceeeCCCCCcHHHHHHHccCc
Confidence 99999999 665 4999999999999999999984
No 56
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=3.9e-27 Score=195.04 Aligned_cols=155 Identities=14% Similarity=0.192 Sum_probs=125.8
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccc
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKK 117 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~ 117 (235)
.+.+|.||||.|+..|+.++++.|++...... ...+..+..|.||||+|+..++. ++|++|++.++....
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~------ 73 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDL--AFLNFQNNLQQTPLHLAVITNQP--EIAEALLGAGCDPEL------ 73 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----C--CCCCCCCTTCCCHHHHHHHTTCH--HHHHCCCSCCCCSCC------
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccH--HHhhccCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCC------
Confidence 45679999999999999999988887654100 01234466789999999999977 999999998776542
Q ss_pred ccccCcchHHHHHHHcCCHHHHHHHHHhCCC-----ccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccC
Q 044483 118 DKNWAFRLTLLFAASNGITEILKEIIHQHPQ-----AILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASR 192 (235)
Q Consensus 118 ~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~-----~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~ 192 (235)
.+..|+||||+|+..|+.+++++|++.++. .+ +..|..|.||||+|+..|+.+++++|++.+.+ ++.
T Consensus 74 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~ 145 (236)
T 1ikn_D 74 -RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSIL--KATNYNGHTCLHLASIHGYLGIVELLVSLGAD-----VNA 145 (236)
T ss_dssp -CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGG--GCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-----TTC
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHh--hccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCC
Confidence 233489999999999999999999998753 23 78899999999999999999999999998764 888
Q ss_pred CCC-CCCcHHHHHHhCCCC
Q 044483 193 IDK-KGYTLLHHVADMKHY 210 (235)
Q Consensus 193 ~d~-~G~TpLHlAa~~g~~ 210 (235)
+|. .|+||||+|+..|+.
T Consensus 146 ~~~~~g~tpL~~A~~~~~~ 164 (236)
T 1ikn_D 146 QEPCNGRTALHLAVDLQNP 164 (236)
T ss_dssp CCTTTCCCHHHHHHHTTCH
T ss_pred CCCCCCCCHHHHHHHcCCH
Confidence 887 999999999999995
No 57
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=6.8e-27 Score=194.74 Aligned_cols=155 Identities=8% Similarity=-0.061 Sum_probs=130.0
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccc
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKK 117 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~ 117 (235)
...+|.||||.|+..|+.++++.|++.+++ .+..+..|.||||+|+..|+. ++|++|++.+++.+.
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~d~~g~tpLh~A~~~g~~--~~v~~Ll~~ga~~n~------ 82 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKEMND------PSQPNEEGITALHNAICGANY--SIVDFLITAGANVNS------ 82 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHHSSC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC------
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhcCCC------CCCCCCCCCCHHHHHHHcCCH--HHHHHHHHCCCCCCC------
Confidence 345689999999999999999999998762 234567889999999999977 999999998876542
Q ss_pred ccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCC-CCCChHHHHH--HHcCCHHHHHHHHHhccccc--------
Q 044483 118 DKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVS--VKRRQYKVFELIMKDMRLSV-------- 186 (235)
Q Consensus 118 ~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d-~~g~tpLh~A--v~~g~~~iv~~Ll~~~~~~~-------- 186 (235)
.+..|+||||+|+..|+.+++++|++.+++. +..+ ..|+||||+| +..|+.+++++|++.+++..
T Consensus 83 -~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~---~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~ 158 (229)
T 2vge_A 83 -PDSHGWTPLHCAASCNDTVICMALVQHGAAI---FATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVY 158 (229)
T ss_dssp -CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT---TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEE
T ss_pred -CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc---ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchH
Confidence 2334999999999999999999999998886 6765 6999999999 99999999999998764221
Q ss_pred -------------------cccccCCCCCCCcHHHHHHhCCCC
Q 044483 187 -------------------PKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 187 -------------------~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
...++.+|.+|+||||+|+..|+.
T Consensus 159 ~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~ 201 (229)
T 2vge_A 159 ALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQE 201 (229)
T ss_dssp ESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEE
T ss_pred HHHHHhhccccccCccccccccccccCCCcccHHHHHHHcCCc
Confidence 112567899999999999999995
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=3.3e-25 Score=174.93 Aligned_cols=159 Identities=11% Similarity=0.139 Sum_probs=124.6
Q ss_pred cHHHHHHHHHhhCCCCCCccccccccCCCccccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCC
Q 044483 4 NADKLLKMLVKETPCLGDGEQNLEIFSPNPESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGN 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t 83 (235)
+.-++|++|+++.+.. ....+..|.||||.|+..|+.+++++|++.+.+ .+..+..|.|
T Consensus 13 g~~~~v~~ll~~~~~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t 71 (172)
T 3v30_A 13 GELDQLKEHLRKGDNL---------------VNKPDERGFTPLIWASAFGEIETVRFLLEWGAD------PHILAKERES 71 (172)
T ss_dssp TCHHHHHHHHTTCSGG---------------GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTCCC
T ss_pred CCHHHHHHHHHcCccc---------------ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------chhhcccCCC
Confidence 3446666776654321 123345799999999999999999999998762 2344667899
Q ss_pred hhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHH
Q 044483 84 MIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNIL 163 (235)
Q Consensus 84 ~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpL 163 (235)
|||+|+..++. +++++|++.++.... .+..|+||||+|+..|+.+++++|++.+++. +.+|..|+|||
T Consensus 72 ~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~g~t~l 139 (172)
T 3v30_A 72 ALSLASTGGYT--DIVGLLLERDVDINI-------YDWNGGTPLLYAVRGNHVKCVEALLARGADL---TTEADSGYTPM 139 (172)
T ss_dssp HHHHHHHTTCH--HHHHHHHTTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHH
T ss_pred HHHHHHHCCCH--HHHHHHHHcCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc---cccCCCCCCHH
Confidence 99999999977 999999998776542 2334899999999999999999999988776 88999999999
Q ss_pred HHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcH
Q 044483 164 HVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTL 200 (235)
Q Consensus 164 h~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 200 (235)
|+|+..|+.+++++|++.+.. ....+..|.||
T Consensus 140 ~~A~~~~~~~~~~~L~~~~~~-----~~~~~~~~~~p 171 (172)
T 3v30_A 140 DLAVALGYRKVQQVIENHILK-----LFQSNLVPADP 171 (172)
T ss_dssp HHHHHHTCHHHHHHHHHHHHH-----HSCC-------
T ss_pred HHHHHhCcHHHHHHHHHHHHH-----HhcccCCCCCC
Confidence 999999999999999998764 77788888887
No 59
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=4.6e-25 Score=181.12 Aligned_cols=184 Identities=11% Similarity=0.067 Sum_probs=130.6
Q ss_pred cHHHHHHHHHhhCCCCC----------------CccccccccCCCccccC--CCCCCchHHHHHHhcCcHHHHHHHHhhC
Q 044483 4 NADKLLKMLVKETPCLG----------------DGEQNLEIFSPNPESST--TSSDKISIISLGLGKGNMLKAKKLVDFS 65 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~~~~~--~~~~G~t~Lh~A~~~g~~~~~~~ll~~~ 65 (235)
+.-+++++|++....+. +..+.++.|+..+.... ....|.||||.|+..|+.++++.|++.+
T Consensus 20 g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g 99 (240)
T 3eu9_A 20 GIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYG 99 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcC
Confidence 45678899988754322 23333444443322211 1223788888888888888888877766
Q ss_pred hhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCC-HHHHHHHHH
Q 044483 66 AGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGI-TEILKEIIH 144 (235)
Q Consensus 66 ~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~-~~iv~~Ll~ 144 (235)
.+ .+..+..|.||||+|+..++. +++++|++.++.... .+..|.||||+|+..|+ .+++++|++
T Consensus 100 ~~------~~~~~~~g~t~l~~A~~~~~~--~~~~~Ll~~~~~~~~-------~~~~g~t~l~~a~~~~~~~~~~~~L~~ 164 (240)
T 3eu9_A 100 AD------PSLIDGEGCSCIHLAAQFGHT--SIVAYLIAKGQDVDM-------MDQNGMTPLMWAAYRTHSVDPTRLLLT 164 (240)
T ss_dssp CC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred CC------CcccCCCCCCHHHHHHHcCHH--HHHHHHHhcCCCccc-------cCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence 51 223355677888888888766 888888887664431 22347888888886665 778888888
Q ss_pred hCCCccccccCCC-CCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 145 QHPQAILLDNLNE-KEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 145 ~~~~~~~~~~~d~-~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
.+.+. +..+. .|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|++.|+.
T Consensus 165 ~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~l~~A~~~~~~ 223 (240)
T 3eu9_A 165 FNVSV---NLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN-----VDAQNIKGESALDLAKQRKNV 223 (240)
T ss_dssp TTCCT---TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-----TTCBCTTSCBHHHHHHHTTCH
T ss_pred cCCCc---chhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCcH
Confidence 77665 66665 889999999999999999999988754 888899999999999999886
No 60
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=3.3e-25 Score=191.77 Aligned_cols=167 Identities=17% Similarity=0.153 Sum_probs=133.5
Q ss_pred CccccccccCCCc--cccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHH
Q 044483 21 DGEQNLEIFSPNP--ESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGEL 98 (235)
Q Consensus 21 ~~~~~~~~l~~~~--~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~i 98 (235)
+..+.++.++... .....+..|.||||+|+..|+.++++.|++.+.+ .+..+..|.||||+|+..|+. ++
T Consensus 35 g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~--~i 106 (351)
T 3utm_A 35 GNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD------VHAKDKGGLVPLHNACSYGHY--EV 106 (351)
T ss_dssp TCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCH--HH
T ss_pred CCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCcHHHHHHHCCCH--HH
Confidence 3444444444322 2233456699999999999999999999998772 234467889999999999977 99
Q ss_pred HHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCcccccc------------------------
Q 044483 99 VELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDN------------------------ 154 (235)
Q Consensus 99 v~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~------------------------ 154 (235)
+++|++.++.... .+..|+||||+|+..|+.+++++|++.+++. +.
T Consensus 107 v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~~~l~~a~~~~~~~~~~~~ 176 (351)
T 3utm_A 107 TELLLKHGACVNA-------MDLWQFTPLHEAASKNRVEVCSLLLSHGADP---TLVNCHGKSAVDMAPTPELRERLTYE 176 (351)
T ss_dssp HHHHHHTTCCTTC-------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHCSSHHHHHHHHHH
T ss_pred HHHHHHCCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---ccccCCCCcchHHHhhhhhHHHHHhh
Confidence 9999998775542 2334899999999999999999999987664 32
Q ss_pred ------------------------------CCCCCChHHHHHHHc---CCHHHHHHHHHhccccccccccCCCCCCCcHH
Q 044483 155 ------------------------------LNEKEQNILHVSVKR---RQYKVFELIMKDMRLSVPKWASRIDKKGYTLL 201 (235)
Q Consensus 155 ------------------------------~d~~g~tpLh~Av~~---g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 201 (235)
.+..|.||||+|+.. +..+++++|++.+.+ ++.+|..|+|||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~L 251 (351)
T 3utm_A 177 FKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN-----VNEKNKDFMTPL 251 (351)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC-----TTCCCTTCCCHH
T ss_pred hcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC-----cCCcCCCCCCHH
Confidence 346688999999999 558999999998754 899999999999
Q ss_pred HHHHhCCCC
Q 044483 202 HHVADMKHY 210 (235)
Q Consensus 202 HlAa~~g~~ 210 (235)
|+|+..|+.
T Consensus 252 ~~A~~~g~~ 260 (351)
T 3utm_A 252 HVAAERAHN 260 (351)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHcCCH
Confidence 999999995
No 61
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=1e-25 Score=199.76 Aligned_cols=157 Identities=10% Similarity=0.050 Sum_probs=129.4
Q ss_pred ccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcC---Ccchh
Q 044483 35 SSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKD---CTNKA 111 (235)
Q Consensus 35 ~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~---~~~~~ 111 (235)
....+.+|.||||.|+..|+.+++++|++.+++ .+..+..|.||||+|+..|+. +++++|++.+ +...
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~------~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~- 229 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD------PTIYNKSERSALHQAAANRDF--GMMVYMLNSTKLKGDIE- 229 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------SCCCCTTCCCHHHHHHHTTCH--HHHHHHTTSHHHHHTTS-
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC------CcccCCCCCCHHHHHHHCCCH--HHHHHHHhcCccccChh-
Confidence 344556799999999999999999999998772 234467789999999999977 9999999864 2221
Q ss_pred hhhcccccccCcchHHHHHHHcC---CHHHHHHHHHhCCCccc-----cccCCCCCChHHHHHHHcCCHHHHHHHHHhcc
Q 044483 112 VHNYKKDKNWAFRLTLLFAASNG---ITEILKEIIHQHPQAIL-----LDNLNEKEQNILHVSVKRRQYKVFELIMKDMR 183 (235)
Q Consensus 112 ~~~~~~~~~~~g~TpLh~Aa~~g---~~~iv~~Ll~~~~~~~~-----~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~ 183 (235)
..+..|.||||+|+..| +.+++++|++.+++.-. .+..|..|+||||+|+..|+.++|++|++.+.
T Consensus 230 ------~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 303 (373)
T 2fo1_E 230 ------ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG 303 (373)
T ss_dssp ------CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC
T ss_pred ------hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcC
Confidence 12345999999999998 89999999999877510 01367799999999999999999999998752
Q ss_pred ccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 184 LSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 184 ~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
.+++.+|..|+||||+|+..|+.
T Consensus 304 ----~~~n~~d~~g~TpL~~A~~~g~~ 326 (373)
T 2fo1_E 304 ----SNKDKQDEDGKTPIMLAAQEGRI 326 (373)
T ss_dssp ----CCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ----CCccCcCCCCCCHHHHHHHcCCH
Confidence 34999999999999999999995
No 62
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=7e-25 Score=180.05 Aligned_cols=169 Identities=11% Similarity=0.020 Sum_probs=128.0
Q ss_pred CCccccccccCCCc-cccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHH
Q 044483 20 GDGEQNLEIFSPNP-ESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGEL 98 (235)
Q Consensus 20 ~~~~~~~~~l~~~~-~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~i 98 (235)
.+..+.++.|+..+ .....+..|.||||.|+..|+.++++.|++.++ ......+..|.||||+|+..++. ++
T Consensus 19 ~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-----~~~~~~~~~~~t~L~~A~~~~~~--~~ 91 (240)
T 3eu9_A 19 YGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGA-----IVDQLGGDLNSTPLHWATRQGHL--SM 91 (240)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCBTTTTBCHHHHHHHHTCH--HH
T ss_pred cCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCC-----cchhhcCCcCCChhHHHHHcCCH--HH
Confidence 45556666666432 333445668899999999999999998888776 23333445578999999988876 89
Q ss_pred HHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCC-HHHHHH
Q 044483 99 VELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQ-YKVFEL 177 (235)
Q Consensus 99 v~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~-~~iv~~ 177 (235)
+++|++.++.... .+..|.||||+|+..|+.+++++|++.+++. +..|..|.||||+|+..++ .+++++
T Consensus 92 v~~Ll~~g~~~~~-------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~g~t~l~~a~~~~~~~~~~~~ 161 (240)
T 3eu9_A 92 VVQLMKYGADPSL-------IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV---DMMDQNGMTPLMWAAYRTHSVDPTRL 161 (240)
T ss_dssp HHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHCCSSTTHHH
T ss_pred HHHHHHcCCCCcc-------cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc---cccCCCCCcHHHHHHHhCChHHHHHH
Confidence 9999887665431 2234789999999999999999999887765 7888889999999986666 788888
Q ss_pred HHHhccccccccccCCCC-CCCcHHHHHHhCCCC
Q 044483 178 IMKDMRLSVPKWASRIDK-KGYTLLHHVADMKHY 210 (235)
Q Consensus 178 Ll~~~~~~~~~~~~~~d~-~G~TpLHlAa~~g~~ 210 (235)
|++.+.+ ++..+. .|+||||+|+..|+.
T Consensus 162 L~~~~~~-----~~~~~~~~g~t~L~~A~~~~~~ 190 (240)
T 3eu9_A 162 LLTFNVS-----VNLGDKYHKNTALHWAVLAGNT 190 (240)
T ss_dssp HHHTTCC-----TTCCCTTTCCCHHHHHHHHTCH
T ss_pred HHhcCCC-----cchhhccCCCcHHHHHHHcCCH
Confidence 8887653 777776 899999999998885
No 63
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=7.5e-26 Score=189.70 Aligned_cols=156 Identities=10% Similarity=0.081 Sum_probs=121.8
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHh----hChhhHHHHhcccc---ccCCCChhhHHH---hcCCChHHHHHHHHhcCCcc
Q 044483 40 SDKISIISLGLGKGNMLKAKKLVD----FSAGELNELLLKKD---CTNKGNMIKAKK---FVDFSAGELVELFVKKDCTN 109 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~~~~~~ll~----~~~~~~~~~l~~~~---~~~~~t~Lh~A~---~~~~~~~~iv~~Ll~~~~~~ 109 (235)
..|+||||.|+..|+.+.++.|++ .+. .+.... +..|.||||+|+ ..|+. ++|++|++.++..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~-----~~~~~~~~~~~~g~t~L~~A~~~~~~g~~--~~v~~Ll~~g~~~ 75 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKK-----RLTDEEFREPSTGKTCLPKALLNLSAGRN--DTIPILLDIAEKT 75 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTC-----CTTSGGGSCTTTCCCHHHHHHTSCBTTBC--THHHHHHHHHHHT
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCC-----CcchhhhhccCCCCcHHHHHHHHhhcCCH--HHHHHHHHhcccc
Confidence 458999999999999996655554 444 111111 256899999999 56877 9999999865432
Q ss_pred hhhh---hc-ccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCC--------------CCCChHHHHHHHcCC
Q 044483 110 KAVH---NY-KKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLN--------------EKEQNILHVSVKRRQ 171 (235)
Q Consensus 110 ~~~~---~~-~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d--------------~~g~tpLh~Av~~g~ 171 (235)
.... +. ....+..|+||||+||..|+.++|++|++.+++. +..| ..|+||||+|+..|+
T Consensus 76 ~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~ 152 (260)
T 3jxi_A 76 GNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV---HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ 152 (260)
T ss_dssp TCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTC
T ss_pred cchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc---CccccccccCcccccccccCCCCHHHHHHHcCC
Confidence 1100 00 0111225899999999999999999999988776 7777 689999999999999
Q ss_pred HHHHHHHHH---hccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 172 YKVFELIMK---DMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 172 ~~iv~~Ll~---~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
.+++++|++ .++ +++.+|..|+||||+|++.|+.
T Consensus 153 ~~~v~~Ll~~~~~ga-----~~~~~d~~g~TpLh~A~~~~~~ 189 (260)
T 3jxi_A 153 PHIVHYLTENGHKQA-----DLRRQDSRGNTVLHALVAIADN 189 (260)
T ss_dssp HHHHHHHHHCSSCCC-----CTTCCCTTSCCHHHHHHHHCCS
T ss_pred HHHHHHHHhccccCC-----CCcccCCCCCcHHHHHHHhccC
Confidence 999999999 655 4999999999999999998874
No 64
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=9.2e-26 Score=188.20 Aligned_cols=148 Identities=10% Similarity=-0.005 Sum_probs=99.8
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccc
Q 044483 40 SDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDK 119 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~ 119 (235)
..|.||||.|+..|+.++++.|++.+.+ +. .+..+.||||.|+..|+. ++|++|++.+++... .
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~-----~~--~~~~~~t~L~~A~~~g~~--~~v~~Ll~~g~~~~~-------~ 66 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMR-----VK--FNPLPLALLLDSSLEGEF--DLVQRIIYEVDDPSL-------P 66 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCH--HHHHHHTSTTSSCCC-------C
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCC-----cc--cCchhhHHHHHHHHcCCH--HHHHHHHHcCCCCCC-------c
Confidence 4699999999999999999999988872 21 135578999999999977 999999998775431 2
Q ss_pred ccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCC-
Q 044483 120 NWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGY- 198 (235)
Q Consensus 120 ~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~- 198 (235)
+..|+||||+||..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|.
T Consensus 67 d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~~~~ 138 (239)
T 1ycs_B 67 NDEGITALHNAVCAGHTEIVKFLVQFGVNV---NAADSDGWTPLHCAASCNNVQVCKFLVESGAA-----VFAMTYSDMQ 138 (239)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCSSSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----cceecCCCCc
Confidence 334899999999999999999999998876 89999999999999999999999999998764 888887777
Q ss_pred cHHHHH--HhCCCCC
Q 044483 199 TLLHHV--ADMKHYK 211 (235)
Q Consensus 199 TpLHlA--a~~g~~~ 211 (235)
||||+| +..|+..
T Consensus 139 t~l~~a~~~~~g~~~ 153 (239)
T 1ycs_B 139 TAADKCEEMEEGYTQ 153 (239)
T ss_dssp CHHHHCCSSSTTCCC
T ss_pred chHHHHHHhhhccHH
Confidence 999999 7777753
No 65
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=2e-25 Score=174.20 Aligned_cols=144 Identities=9% Similarity=0.035 Sum_probs=107.3
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccc
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKK 117 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~ 117 (235)
....|.||||.|+..|+.++++.|++.+. ..+..+..|.||||+|+ .++. +++++|++.++....
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~-~~~~--~~v~~Ll~~g~~~~~------ 72 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGA------NPNAPNSYGRRPIQVMM-MGSA--RVAELLLLHGAEPNC------ 72 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTC------CTTCCCSSSCCTTTSSC-TTCH--HHHHHHHTTTCCCCC------
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCC------CCCCCCCCCCCHHHHHH-cCCH--HHHHHHHHcCCCCCC------
Confidence 34569999999999999999999998876 22344668899999985 6655 999999998775542
Q ss_pred ccccCcch-HHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCC
Q 044483 118 DKNWAFRL-TLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKK 196 (235)
Q Consensus 118 ~~~~~g~T-pLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 196 (235)
.+..|+| |||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..
T Consensus 73 -~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~---~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~ 143 (156)
T 1bi7_B 73 -ADPATLTRPVHDAAREGFLDTLVVLHRAGARL---DVRDAWGRLPVDLAEELGHRDVARYLRAAAGG-----TRGSNHA 143 (156)
T ss_dssp -CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS---SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------
T ss_pred -cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC-----CCccCcC
Confidence 2334888 999999999999999999998876 89999999999999999999999999998764 9999999
Q ss_pred CCcHHHHHH
Q 044483 197 GYTLLHHVA 205 (235)
Q Consensus 197 G~TpLHlAa 205 (235)
|.||.+-+.
T Consensus 144 g~t~~~~~~ 152 (156)
T 1bi7_B 144 RIDAAEGPS 152 (156)
T ss_dssp ---------
T ss_pred cCcccccCC
Confidence 999987543
No 66
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=1.3e-24 Score=189.04 Aligned_cols=165 Identities=15% Similarity=0.116 Sum_probs=119.0
Q ss_pred CCchHHHHHHhcCcHHHHHHHHhhChhh----------------------HHHHhcc-----ccccCCCChhhHHHhcCC
Q 044483 41 DKISIISLGLGKGNMLKAKKLVDFSAGE----------------------LNELLLK-----KDCTNKGNMIKAKKFVDF 93 (235)
Q Consensus 41 ~G~t~Lh~A~~~g~~~~~~~ll~~~~~~----------------------~~~~l~~-----~~~~~~~t~Lh~A~~~~~ 93 (235)
.|+||||+|+..|+.+++++|++.+++. ...++.. ..+..|.||||+|+..++
T Consensus 58 ~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~ 137 (337)
T 4g8k_A 58 GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 137 (337)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTC
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCc
Confidence 4899999999999999999999876521 1111111 124568899999999998
Q ss_pred ChHHHHHHHHhcCCcchhhhhcc---cccccCcchHHHHHHHcCCHHHHHHHHHhCCCcc--------------------
Q 044483 94 SAGELVELFVKKDCTNKAVHNYK---KDKNWAFRLTLLFAASNGITEILKEIIHQHPQAI-------------------- 150 (235)
Q Consensus 94 ~~~~iv~~Ll~~~~~~~~~~~~~---~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~-------------------- 150 (235)
. +++++|++.++......... ...+..|.||||+||+.|+.++|++|+++.+..+
T Consensus 138 ~--~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~ 215 (337)
T 4g8k_A 138 V--KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD 215 (337)
T ss_dssp H--HHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT
T ss_pred H--HHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc
Confidence 7 99999999877554211110 1123358999999999999999999996532111
Q ss_pred ---------c------cccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCCC
Q 044483 151 ---------L------LDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHYK 211 (235)
Q Consensus 151 ---------~------~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~~ 211 (235)
+ .+.+|..|+||||+|+..|+.+++++|+... ..+++.+|.+|+||||+|++.|+..
T Consensus 216 ~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~----~~~vn~~d~~G~TpL~~A~~~g~~~ 287 (337)
T 4g8k_A 216 SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE----HIEINDTDSDGKTALLLAVELKLKK 287 (337)
T ss_dssp TTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTST----TCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred ccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc----CCcccCcCCCCCCHHHHHHHcCCHH
Confidence 0 1345667788888888888888888887642 2347888888888888888888863
No 67
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=1.9e-24 Score=164.92 Aligned_cols=129 Identities=9% Similarity=0.063 Sum_probs=111.5
Q ss_pred cCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhc
Q 044483 36 STTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNY 115 (235)
Q Consensus 36 ~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~ 115 (235)
...+..|.||||.|+..|+.++++.|++.+. ..+..+..|.||||+|+. ++. +++++|++.++....
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~-~~~--~~v~~Ll~~g~~~~~---- 72 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGA------DPNALNRFGRRPIQVMMM-GSA--QVAELLLLHGAEPNC---- 72 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTCCTTTTTSTT-SCH--HHHHHHHHHTCCSSC----
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCC------CcCCcCCCCCCHHHHHHc-CCH--HHHHHHHHCCCCCCC----
Confidence 3455679999999999999999999999876 223446788999999999 876 999999998775531
Q ss_pred ccccccC-cchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhcc
Q 044483 116 KKDKNWA-FRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMR 183 (235)
Q Consensus 116 ~~~~~~~-g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~ 183 (235)
.+.. |+||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++.++
T Consensus 73 ---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 73 ---ADPATLTRPVHDAAREGFLDTLVVLHRAGARL---DVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp ---CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC---CCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred ---cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 2334 799999999999999999999988876 8999999999999999999999999999864
No 68
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=1.4e-25 Score=181.58 Aligned_cols=147 Identities=14% Similarity=0.071 Sum_probs=122.6
Q ss_pred CchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCC--hHHHHHHHHhcCCcchhhhhccccc
Q 044483 42 KISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFS--AGELVELFVKKDCTNKAVHNYKKDK 119 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~--~~~iv~~Ll~~~~~~~~~~~~~~~~ 119 (235)
+.++|+.|++.|+.+.++.++..+. ...++..|.||||+|+..++. ..+++++|++.|++.+. .
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~-------~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-------~ 71 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY-------EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS-------R 71 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS-------SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-------C
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc-------ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-------C
Confidence 5678999999999999888877654 111235689999999998864 23699999999887652 2
Q ss_pred ccCcchHHHHHHHcCC------HHHHHHHHHhCCCccccccCCCCCC-hHHHHHHHcCC-----HHHHHHHHH-hccccc
Q 044483 120 NWAFRLTLLFAASNGI------TEILKEIIHQHPQAILLDNLNEKEQ-NILHVSVKRRQ-----YKVFELIMK-DMRLSV 186 (235)
Q Consensus 120 ~~~g~TpLh~Aa~~g~------~~iv~~Ll~~~~~~~~~~~~d~~g~-tpLh~Av~~g~-----~~iv~~Ll~-~~~~~~ 186 (235)
+..|+||||+|+..|+ .+++++|++.++++ +.+|..|+ ||||+|+..+. .+++++|++ .+++
T Consensus 72 d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi---n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad-- 146 (186)
T 3t8k_A 72 TKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI---TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-- 146 (186)
T ss_dssp CTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS---SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC--
T ss_pred CCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC---CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC--
Confidence 3359999999999997 68999999998886 99999999 99999999554 569999998 7754
Q ss_pred cccccCCCCCCCcHHHHHHhCCCC
Q 044483 187 PKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 187 ~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
++.+|..|+||||+|++.|+.
T Consensus 147 ---~~~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 147 ---LLIKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp ---TTCCCTTSCCHHHHHHTTTCH
T ss_pred ---CcccCCCCCCHHHHHHHcCCH
Confidence 999999999999999999986
No 69
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=9.7e-24 Score=183.53 Aligned_cols=149 Identities=13% Similarity=0.093 Sum_probs=120.9
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhh-ChhhHHHHhccccccCCCChhhHHHhcCCC-h-HHHHHHHHhcCCcchhhhh
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDF-SAGELNELLLKKDCTNKGNMIKAKKFVDFS-A-GELVELFVKKDCTNKAVHN 114 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~-~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~-~-~~iv~~Ll~~~~~~~~~~~ 114 (235)
....|.||||.|+..|+.+++++|+.. +. ..+..+..|.|++|.++..+.. . .+++++|++.|++.+.
T Consensus 164 ~~~~g~T~L~~A~~~g~~~~v~~LL~~~ga------d~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~--- 234 (337)
T 4g8k_A 164 LRKGGATALMDAAEKGHVEVLKILLDEMGA------DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV--- 234 (337)
T ss_dssp CTTCSCCHHHHHHHHTCHHHHHHHHHHSCC------CTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTC---
T ss_pred ccCCCCcHHHHHHHCCCHHHHHHHHhccCC------CcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCC---
Confidence 345699999999999999999999964 44 2244567788999988766542 1 2588999998876542
Q ss_pred cccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCC
Q 044483 115 YKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRID 194 (235)
Q Consensus 115 ~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d 194 (235)
.+..|+||||+|+..|+.++++.|+...+..+ +.+|..|+||||+|++.|+.++|++|+++|++ ++
T Consensus 235 ----~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~v--n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd-----~n--- 300 (337)
T 4g8k_A 235 ----RGERGKTPLILAVEKKHLGLVQRLLEQEHIEI--NDTDSDGKTALLLAVELKLKKIAELLCKRGAS-----TD--- 300 (337)
T ss_dssp ----CCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCT--TCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS-----ST---
T ss_pred ----cCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcc--cCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CC---
Confidence 23348999999999999999999998655555 99999999999999999999999999998753 44
Q ss_pred CCCCcHHHHHHhCCCCC
Q 044483 195 KKGYTLLHHVADMKHYK 211 (235)
Q Consensus 195 ~~G~TpLHlAa~~g~~~ 211 (235)
+.||||+|++.|+..
T Consensus 301 --~~~~L~~A~~~~~~~ 315 (337)
T 4g8k_A 301 --CGDLVMTARRNYDHS 315 (337)
T ss_dssp --TCCHHHHHHHTTCHH
T ss_pred --CCCHHHHHHHcCCHH
Confidence 457999999999963
No 70
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=4e-24 Score=166.64 Aligned_cols=128 Identities=13% Similarity=0.084 Sum_probs=111.0
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccc
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKK 117 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~ 117 (235)
.+..|.||||.|+. |+.++++.|++.+. ..+..+..|.||||+|+..++. +++++|++.+++...
T Consensus 34 ~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~------ 98 (162)
T 1ihb_A 34 QNGFGRTALQVMKL-GNPEIARRLLLRGA------NPDLKDRTGFAVIHDAARAGFL--DTLQTLLEFQADVNI------ 98 (162)
T ss_dssp CCTTSCCHHHHCCS-SCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHHTCH--HHHHHHHHTTCCTTC------
T ss_pred cCccCccHHHHHHc-CcHHHHHHHHHcCC------CCCCCCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCC------
Confidence 45579999999999 99999999999876 2234467789999999999977 999999998775432
Q ss_pred ccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhcc
Q 044483 118 DKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMR 183 (235)
Q Consensus 118 ~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~ 183 (235)
.+..|+||||+|+..|+.+++++|++.+++.+ +..|..|+||||+|+..|+.+++++|+++|+
T Consensus 99 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 99 -EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNV--GHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp -CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCC--CCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 23348999999999999999999999999866 8999999999999999999999999999874
No 71
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=7.5e-25 Score=182.65 Aligned_cols=174 Identities=6% Similarity=-0.093 Sum_probs=126.2
Q ss_pred CCCccccccccCCCccccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHH
Q 044483 19 LGDGEQNLEIFSPNPESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGEL 98 (235)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~i 98 (235)
..+..+.++.++...........|.||||.|+..|+.++++.|++.++ ..+..+..|.||||+|+..|+. ++
T Consensus 14 ~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~------~~~~~d~~g~t~L~~A~~~g~~--~~ 85 (239)
T 1ycs_B 14 RTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVD------DPSLPNDEGITALHNAVCAGHT--EI 85 (239)
T ss_dssp -----------------------CHHHHHHHHHHTCHHHHHHHTSTTS------SCCCCCTTSCCHHHHHHHHTCH--HH
T ss_pred hhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHcCCH--HH
Confidence 344555566666544333334568999999999999999999998876 2244567889999999999987 99
Q ss_pred HHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCC-hHHHHH--HHcCCHHHH
Q 044483 99 VELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ-NILHVS--VKRRQYKVF 175 (235)
Q Consensus 99 v~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~-tpLh~A--v~~g~~~iv 175 (235)
|++|++.+++.+. .+..|+||||+||..|+.+++++|++.+++. +..+..|. ||||+| +..|+.+++
T Consensus 86 v~~Ll~~ga~~~~-------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~~~~t~l~~a~~~~~g~~~~~ 155 (239)
T 1ycs_B 86 VKFLVQFGVNVNA-------ADSDGWTPLHCAASCNNVQVCKFLVESGAAV---FAMTYSDMQTAADKCEEMEEGYTQCS 155 (239)
T ss_dssp HHHHHHHTCCTTC-------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCSSSCCCHHHHCCSSSTTCCCHH
T ss_pred HHHHHHcCCCCCc-------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc---ceecCCCCcchHHHHHHhhhccHHHH
Confidence 9999998776542 2334999999999999999999999998886 77887776 999999 889999999
Q ss_pred HHHHHhccccc----cccccCCCCCCCcHHHHHHhCCCC
Q 044483 176 ELIMKDMRLSV----PKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 176 ~~Ll~~~~~~~----~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
++|++.++... .......|..|.||+++|.+.|..
T Consensus 156 ~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~ 194 (239)
T 1ycs_B 156 QFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDC 194 (239)
T ss_dssp HHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCE
T ss_pred HHHHHhhhcccccccceEEEEeccCCCCCCcccccCCCE
Confidence 99999876411 111233488999999999999984
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.90 E-value=7.8e-24 Score=164.24 Aligned_cols=140 Identities=14% Similarity=0.167 Sum_probs=116.6
Q ss_pred cHHHHHHHHHhhCCCCCCccccccccCCCccccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCC
Q 044483 4 NADKLLKMLVKETPCLGDGEQNLEIFSPNPESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGN 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t 83 (235)
+.-++|++|++..+.. ..+..|.||||.|+..|+.++++.|++.+.+ .+..+..|.|
T Consensus 13 g~~~~v~~Ll~~g~~~-----------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t 69 (153)
T 1awc_B 13 GQDDEVRILMANGAPF-----------------TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS------RDARTKVDRT 69 (153)
T ss_dssp TCHHHHHHHHHHTCCC-----------------CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC------TTCCCTTCCC
T ss_pred CCHHHHHHHHHcCCCC-----------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCC
Confidence 3456788888765421 1244699999999999999999999988762 2344667899
Q ss_pred hhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHH
Q 044483 84 MIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNIL 163 (235)
Q Consensus 84 ~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpL 163 (235)
|||+|+..++. +++++|++.+++... .+..|+||||+|+..|+.+++++|++.+++. +.+|..|+|||
T Consensus 70 ~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~g~t~l 137 (153)
T 1awc_B 70 PLHMAASEGHA--NIVEVLLKHGADVNA-------KDMLKMTALHWATEHNHQEVVELLIKYGADV---HTQSKFCKTAF 137 (153)
T ss_dssp HHHHHHHHTCH--HHHHHHHTTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHH
T ss_pred HHHHHHHcChH--HHHHHHHHcCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc---cccCCCCCCHH
Confidence 99999999977 999999998776542 2334899999999999999999999998876 88999999999
Q ss_pred HHHHHcCCHHHHHHH
Q 044483 164 HVSVKRRQYKVFELI 178 (235)
Q Consensus 164 h~Av~~g~~~iv~~L 178 (235)
|+|+..|+.+++++|
T Consensus 138 ~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 138 DISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999987
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.90 E-value=4.2e-23 Score=162.80 Aligned_cols=144 Identities=14% Similarity=0.184 Sum_probs=118.8
Q ss_pred cHHHHHHHHHhhCCCCCCccccccccCCCccccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCC
Q 044483 4 NADKLLKMLVKETPCLGDGEQNLEIFSPNPESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGN 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t 83 (235)
+.-++|++|++..+.+ ...+.+|.||||.|+..|+.++++.|++.+.+ .+..+..|.|
T Consensus 25 g~~~~v~~Ll~~g~~~----------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t 82 (169)
T 2y1l_E 25 GRDDEVRILMANGADV----------------NAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD------VNAVDHAGMT 82 (169)
T ss_dssp TCHHHHHHHHHTTCCT----------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCC
T ss_pred CCHHHHHHHHHCCCCC----------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCC
Confidence 3456777777764321 22345799999999999999999999998762 2344667899
Q ss_pred hhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHH
Q 044483 84 MIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNIL 163 (235)
Q Consensus 84 ~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpL 163 (235)
|||+|+..++. +++++|++.++.... .+..|+||||+|+..|+.+++++|++.+++. +.+|..|.|||
T Consensus 83 ~L~~A~~~~~~--~~~~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~l 150 (169)
T 2y1l_E 83 PLRLAALFGHL--EIVEVLLKNGADVNA-------NDMEGHTPLHLAAMFGHLEIVEVLLKNGADV---NAQDKFGKTAF 150 (169)
T ss_dssp HHHHHHHTTCH--HHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHH
T ss_pred HHHHHHHcCCH--HHHHHHHHcCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHH
Confidence 99999999977 999999998775532 2334899999999999999999999998876 88999999999
Q ss_pred HHHHHcCCHHHHHHHHHh
Q 044483 164 HVSVKRRQYKVFELIMKD 181 (235)
Q Consensus 164 h~Av~~g~~~iv~~Ll~~ 181 (235)
|+|+..|+.+++++|++.
T Consensus 151 ~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 151 DISIDNGNEDLAEILQKL 168 (169)
T ss_dssp HHHHHTTCHHHHHHHHTC
T ss_pred HHHHHhCCHHHHHHHHHc
Confidence 999999999999999874
No 74
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=3.5e-23 Score=153.95 Aligned_cols=125 Identities=18% Similarity=0.253 Sum_probs=108.4
Q ss_pred CCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccc
Q 044483 41 DKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKN 120 (235)
Q Consensus 41 ~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~ 120 (235)
+|.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..++. +++++|++.++.... .+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~------~~~~~~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~-------~~ 65 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------VNAKDKNGRTPLHLAARNGHL--EVVKLLLEAGADVNA-------KD 65 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC------TTCCCTTSCCHHHHHHHHTCH--HHHHHHHHTTCCTTC-------CC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHHcCcH--HHHHHHHHcCCCCcc-------cC
Confidence 489999999999999999999988762 233466789999999999977 999999997765431 23
Q ss_pred cCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhcc
Q 044483 121 WAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMR 183 (235)
Q Consensus 121 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~ 183 (235)
..|.||||+|+..|+.+++++|++.+++. +.+|..|.||||+|+..|+.+++++|++.++
T Consensus 66 ~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 66 KNGRTPLHLAARNGHLEVVKLLLEAGADV---NAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 34899999999999999999999988776 8899999999999999999999999999874
No 75
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=7.5e-23 Score=160.56 Aligned_cols=146 Identities=10% Similarity=0.143 Sum_probs=120.3
Q ss_pred cHHHHHHHHHhhCCCCCCccccccccCCCccccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCC
Q 044483 4 NADKLLKMLVKETPCLGDGEQNLEIFSPNPESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGN 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t 83 (235)
+.-++|++|++..+. ....+..|.||||.|+..|+.++++.|++.+.+ .+..+..|.|
T Consensus 14 g~~~~v~~ll~~~~~----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t 71 (167)
T 3v31_A 14 GEMLYLATRIEQENV----------------INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD------PQLLGKGRES 71 (167)
T ss_dssp TCHHHHHHHHHHSSC----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCC
T ss_pred CCHHHHHHHHHcCCC----------------cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------CCCcCCCCCc
Confidence 345677777766322 122345799999999999999999999998762 2334677889
Q ss_pred hhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHH
Q 044483 84 MIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNIL 163 (235)
Q Consensus 84 ~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpL 163 (235)
|||+|+..++. +++++|++.++.... .+..|+||||+|+..|+.+++++|++.+++. +..|..|+|||
T Consensus 72 ~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~l 139 (167)
T 3v31_A 72 ALSLACSKGYT--DIVKMLLDCGVDVNE-------YDWNGGTPLLYAVHGNHVKCVKMLLESGADP---TIETDSGYNSM 139 (167)
T ss_dssp HHHHHHHHTCH--HHHHHHHHHTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHH
T ss_pred HHHHHHHcCCH--HHHHHHHHCCCCCCc-------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHH
Confidence 99999999977 999999998775542 2334899999999999999999999988776 88999999999
Q ss_pred HHHHHcCCHHHHHHHHHhcc
Q 044483 164 HVSVKRRQYKVFELIMKDMR 183 (235)
Q Consensus 164 h~Av~~g~~~iv~~Ll~~~~ 183 (235)
|+|+..|+.+++++|++++.
T Consensus 140 ~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 140 DLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHH
Confidence 99999999999999998764
No 76
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=2.7e-23 Score=158.46 Aligned_cols=125 Identities=15% Similarity=0.085 Sum_probs=107.3
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccc
Q 044483 39 SSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKD 118 (235)
Q Consensus 39 ~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~ 118 (235)
...|.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..++. +++++|++.+++...
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~------- 75 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD------VNAKDEYGLTPLYLATAHGHL--EIVEVLLKNGADVNA------- 75 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCH--HHHHHHHHTTCCTTC-------
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCc-------
Confidence 34589999999999999999999998762 234467789999999999977 999999998775432
Q ss_pred cccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHh
Q 044483 119 KNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKD 181 (235)
Q Consensus 119 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~ 181 (235)
.+..|+||||+|+..|+.+++++|++.+++. +..|..|+||||+|+..|+.+++++|++.
T Consensus 76 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 76 VDAIGFTPLHLAAFIGHLEIAEVLLKHGADV---NAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---cCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 2234899999999999999999999988776 88999999999999999999999999975
No 77
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.90 E-value=2.7e-23 Score=165.22 Aligned_cols=156 Identities=11% Similarity=0.037 Sum_probs=126.2
Q ss_pred cHHHHHHHHHhhCCCCCCccccccccCCCccccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCC
Q 044483 4 NADKLLKMLVKETPCLGDGEQNLEIFSPNPESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGN 83 (235)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t 83 (235)
+.-++|++|+++.+.. ....+..|.||||.|+..|+.++++.|++.+.+ .+..+..|.|
T Consensus 16 g~~~~v~~ll~~~~~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t 74 (179)
T 3f6q_A 16 GNAVAVRLWLDNTEND---------------LNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR------INVMNRGDDT 74 (179)
T ss_dssp TCHHHHHHHHHCTTSC---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCC
T ss_pred CCHHHHHHHHhcCccc---------------ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------CCCcCCCCCC
Confidence 3456777777765431 123445699999999999999999999998762 2344677899
Q ss_pred hhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHH
Q 044483 84 MIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNIL 163 (235)
Q Consensus 84 ~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpL 163 (235)
|||+|+..++. +++++|++.+++... .+..|.||||+|+..|+.+++++|++.+++. +..|..|+|||
T Consensus 75 ~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~g~tpl 142 (179)
T 3f6q_A 75 PLHLAASHGHR--DIVQKLLQYKADINA-------VNEHGNVPLHYACFWGQDQVAEDLVANGALV---SICNKYGEMPV 142 (179)
T ss_dssp HHHHHHHTTCH--HHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS---SBCCTTSCCGG
T ss_pred HHHHHHHcCCH--HHHHHHHHcCCCCCc-------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc---chhccCCCCcH
Confidence 99999999977 999999998876542 2334899999999999999999999998876 89999999999
Q ss_pred HHHHHcCCHHHHHHHHHhccccccccccCCCCCC
Q 044483 164 HVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKG 197 (235)
Q Consensus 164 h~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 197 (235)
|+|+..++.+++++|++.+++ ++..+..+
T Consensus 143 ~~A~~~~~~~~~~~L~~~g~~-----~~~~~~~~ 171 (179)
T 3f6q_A 143 DKAKAPLRELLRERAEKMGQN-----LNRIPYKD 171 (179)
T ss_dssp GGSCHHHHHHHHHHHHHTTCC-----CSCBCCCC
T ss_pred HHHHHHHHHHHHHHHHHhhcC-----cccCCccc
Confidence 999999999999999998764 55544433
No 78
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.89 E-value=1.5e-23 Score=168.41 Aligned_cols=144 Identities=10% Similarity=0.104 Sum_probs=117.8
Q ss_pred CccccccccCCCc-cccCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHH
Q 044483 21 DGEQNLEIFSPNP-ESSTTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELV 99 (235)
Q Consensus 21 ~~~~~~~~l~~~~-~~~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv 99 (235)
+..+.++.|+... .....+..|.||||.|+..|+.++++.|++.+++ .+..+..|.||||+|+..++. +++
T Consensus 46 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~--~~v 117 (192)
T 2rfm_A 46 GMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN------VNTKDFSGKTPLMWSIIFGYS--EMS 117 (192)
T ss_dssp TCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTSCCHHHHHHHHTCH--HHH
T ss_pred CCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCcHHHHHHHcCCH--HHH
Confidence 4445555555322 2233455699999999999999999999998762 234467789999999999977 999
Q ss_pred HHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHH
Q 044483 100 ELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIM 179 (235)
Q Consensus 100 ~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll 179 (235)
++|++.++.... .+..|.||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|+
T Consensus 118 ~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 118 YFLLEHGANVND-------RNLEGETPLIVASKYGRSEIVKKLLELGADI---SARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHHHHTTCCSSC-------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT---TCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHCCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 999998776541 2334899999999999999999999988776 899999999999999999999999999
Q ss_pred Hhc
Q 044483 180 KDM 182 (235)
Q Consensus 180 ~~~ 182 (235)
+.+
T Consensus 188 ~~~ 190 (192)
T 2rfm_A 188 EVR 190 (192)
T ss_dssp HHH
T ss_pred hcc
Confidence 864
No 79
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.89 E-value=3.2e-23 Score=160.75 Aligned_cols=124 Identities=10% Similarity=0.139 Sum_probs=106.9
Q ss_pred CCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccc
Q 044483 38 TSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKK 117 (235)
Q Consensus 38 ~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~ 117 (235)
.+..|.||||. +..|+.++++.|++.+.+ .+..+..|.||||+|+..|+. +++++|++.+++...
T Consensus 32 ~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~------ 96 (156)
T 1bd8_A 32 LNRFGKTALQV-MMFGSTAIALELLKQGAS------PNVQDTSGTSPVHDAARTGFL--DTLKVLVEHGADVNV------ 96 (156)
T ss_dssp CCTTSCCHHHH-SCTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCSCC------
T ss_pred cCCCCCcHHHH-HHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHcCcH--HHHHHHHHcCCCCCC------
Confidence 34569999999 999999999999998762 244567889999999999977 999999998775532
Q ss_pred ccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHh
Q 044483 118 DKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKD 181 (235)
Q Consensus 118 ~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~ 181 (235)
.+..|+||||+|+..|+.+++++|++. ++. +.+|..|+||||+|+..|+.+++++|+++
T Consensus 97 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~---~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 97 -PDGTGALPIHLAVQEGHTAVVSFLAAE-SDL---HRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp -CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT---TCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred -cCCCCCcHHHHHHHhChHHHHHHHHhc-cCC---CCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 233489999999999999999999987 555 88999999999999999999999999974
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=1.6e-23 Score=159.70 Aligned_cols=117 Identities=9% Similarity=0.021 Sum_probs=103.7
Q ss_pred ccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccC
Q 044483 76 KDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNL 155 (235)
Q Consensus 76 ~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~ 155 (235)
..+..|.||||+|+..++. +++++|++.++.... .+..|+||||+|+. |+.+++++|++.+++. +.+
T Consensus 7 ~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~---~~~ 73 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQV--ETVRQLLEAGADPNA-------LNRFGRRPIQVMMM-GSAQVAELLLLHGAEP---NCA 73 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCH--HHHHHHHHTTCCTTC-------CCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS---SCC
T ss_pred CCCCCCccHHHHHHHcCCH--HHHHHHHHcCCCcCC-------cCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC---CCc
Confidence 3466789999999999977 999999998765431 23348999999999 9999999999998886 899
Q ss_pred CCC-CChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 156 NEK-EQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 156 d~~-g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
|.. |+||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~tpl~~A~~~~~~ 124 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGFLDTLVVLHRAGAR-----LDVCDAWGRLPVDLAEEQGHR 124 (136)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHTCCC-----CCCCSSSSSCHHHHHHHHTCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCCHHHHHHHcCCH
Confidence 999 99999999999999999999998754 899999999999999999985
No 81
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.89 E-value=1.2e-23 Score=179.29 Aligned_cols=150 Identities=11% Similarity=0.066 Sum_probs=126.6
Q ss_pred CchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccccc
Q 044483 42 KISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNW 121 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~ 121 (235)
+++++|.|+..|+.+.++.++....+ ...+..+..|.||||+|+..|+. ++|++|++.+..... ..+.
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~----~~~n~~d~~g~T~Lh~A~~~g~~--~~v~~Ll~~g~~~~~------~~~~ 143 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLD----YVVNIADSNGNTALHYSVSHANF--PVVQQLLDSGVCKVD------KQNR 143 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHH----HHHTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTSCCCTT------CCCT
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHh----hcCcCCCCCCCCHHHHHHHCCCH--HHHHHHHHCCCCcCC------CCCC
Confidence 67888999999999988887765442 23455677899999999999977 999999998763221 1233
Q ss_pred CcchHHHHHH-----HcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCC
Q 044483 122 AFRLTLLFAA-----SNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKK 196 (235)
Q Consensus 122 ~g~TpLh~Aa-----~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 196 (235)
.|+||||+|+ ..|+.+++++|++.+... +..|..|+||||+|+..|+.++|++|++.+++ ++.+|.+
T Consensus 144 ~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~---~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-----~n~~d~~ 215 (276)
T 4hbd_A 144 AGYSPIMLTALATLKTQDDIETVLQLFRLGNIN---AKASQAGQTALMLAVSHGRVDVVKALLACEAD-----VNVQDDD 215 (276)
T ss_dssp TSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT---CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTT
T ss_pred CCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc---cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----CCCCCCC
Confidence 5999999999 779999999999988665 78899999999999999999999999998764 9999999
Q ss_pred CCcHHHHHHhCCCCC
Q 044483 197 GYTLLHHVADMKHYK 211 (235)
Q Consensus 197 G~TpLHlAa~~g~~~ 211 (235)
|+||||+|+..|+..
T Consensus 216 G~TpLh~A~~~g~~~ 230 (276)
T 4hbd_A 216 GSTALMCACEHGHKE 230 (276)
T ss_dssp SCCHHHHHHHHTCHH
T ss_pred CCCHHHHHHHCCCHH
Confidence 999999999999963
No 82
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.89 E-value=3.2e-23 Score=162.40 Aligned_cols=126 Identities=15% Similarity=0.124 Sum_probs=107.5
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccc
Q 044483 39 SSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKD 118 (235)
Q Consensus 39 ~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~ 118 (235)
...|.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..++. +++++|++.++....
T Consensus 39 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~------- 103 (165)
T 3twr_A 39 EGRQSTPLHFAAGYNRVSVVEYLLQHGAD------VHAKDKGGLVPLHNACSYGHY--EVAELLVKHGAVVNV------- 103 (165)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-------
T ss_pred ccCCCCHHHHHHHcChHHHHHHHHhcCCC------CCccCCCCCCHHHHHHHcCcH--HHHHHHHhCCCCCCC-------
Confidence 34589999999999999999999998762 234466789999999999977 999999998876542
Q ss_pred cccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhcc
Q 044483 119 KNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMR 183 (235)
Q Consensus 119 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~ 183 (235)
.+..|+||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+. |+.+++++|++.++
T Consensus 104 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 104 ADLWKFTPLHEAAAKGKYEICKLLLQHGADP---TKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 2334899999999999999999999998776 8999999999999877 89999999998753
No 83
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=2.7e-23 Score=179.93 Aligned_cols=148 Identities=14% Similarity=0.034 Sum_probs=113.2
Q ss_pred CchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCC-ChHHHHHHHHhcCCcchhhhhcccccc
Q 044483 42 KISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDF-SAGELVELFVKKDCTNKAVHNYKKDKN 120 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~-~~~~iv~~Ll~~~~~~~~~~~~~~~~~ 120 (235)
+.++||.|+..|+.+.++.|+..+++.-..+.....+..|.||||+|+..+. ..++++++|++.+++.+. .+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~-------~d 223 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA-------KA 223 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC-------CC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC-------CC
Confidence 5688999999999999999998776310000000136678999999998721 244999999998876542 23
Q ss_pred cCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcH
Q 044483 121 WAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTL 200 (235)
Q Consensus 121 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 200 (235)
..|+||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++.+++ .|+||
T Consensus 224 ~~G~TpLh~A~~~g~~~~v~~Ll~~gad~---~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----------~g~tp 289 (301)
T 2b0o_E 224 ADGNTALHYAALYNQPDCLKLLLKGRALV---GTVNEAGETALDIARKKHHKECEELLEQAQAG-----------TFAFP 289 (301)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCC---SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----------TTSSC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----------CCCCh
Confidence 34999999999999999999999988876 89999999999999999999999999998642 58999
Q ss_pred HHHHHhCCCC
Q 044483 201 LHHVADMKHY 210 (235)
Q Consensus 201 LHlAa~~g~~ 210 (235)
||+|++.|+.
T Consensus 290 Lh~A~~~g~~ 299 (301)
T 2b0o_E 290 LHVDYSWVIS 299 (301)
T ss_dssp CC--------
T ss_pred hHHHHhcCCc
Confidence 9999999985
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.89 E-value=4.7e-23 Score=157.07 Aligned_cols=116 Identities=15% Similarity=0.145 Sum_probs=102.4
Q ss_pred ccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCC
Q 044483 78 CTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE 157 (235)
Q Consensus 78 ~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~ 157 (235)
...+.||||+|+..|+. +++++|++.+++... .+..|+||||+||..|+.+++++|++.+++. +..|.
T Consensus 11 ~~~~~t~l~~A~~~g~~--~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~d~ 78 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQD--DEVRILMANGADVNA-------KDEYGLTPLYLATAHGHLEIVEVLLKNGADV---NAVDA 78 (136)
T ss_dssp -CHHHHHHHHHHHHTCH--HHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCT
T ss_pred cccccHHHHHHHHhCCH--HHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CcCCC
Confidence 34567999999999987 999999998765431 2334899999999999999999999988776 88999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 158 KEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 158 ~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
.|.||||+|+..|+.+++++|++.+.+ ++.+|.+|+||||+|+..|+.
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~tpl~~A~~~~~~ 126 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHGAD-----VNAQDKFGKTAFDISIGNGNE 126 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-----CcCcCCCCCCHHHHHHHCCCH
Confidence 999999999999999999999998754 889999999999999999986
No 85
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=4.8e-23 Score=154.25 Aligned_cols=113 Identities=14% Similarity=0.048 Sum_probs=97.4
Q ss_pred cCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCC
Q 044483 79 TNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEK 158 (235)
Q Consensus 79 ~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~ 158 (235)
..+.||||+|+..|+. +++++|++.++.... .+..|+||||+||..|+.+++++|++.+++. +.+|..
T Consensus 5 ~~~~~~l~~A~~~~~~--~~v~~ll~~~~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~d~~ 72 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDL--DEVKDYVAKGEDVNR-------TLEGGRKPLHYAADCGQLEILEFLLLKGADI---NAPDKH 72 (123)
T ss_dssp --CHHHHHHHHHTTCH--HHHHHHHHTTCCTTS-------CCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT---TCCCTT
T ss_pred cccchHHHHHHHcCCH--HHHHHHHHcCCCcCc-------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---CcCCCC
Confidence 3467999999999977 999999997765431 2334899999999999999999999988776 899999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCC
Q 044483 159 EQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMK 208 (235)
Q Consensus 159 g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g 208 (235)
|+||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|+..+
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLSKGAD-----KTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHhCCHH
Confidence 99999999999999999999998754 8999999999999995443
No 86
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=4.3e-23 Score=157.15 Aligned_cols=117 Identities=11% Similarity=0.124 Sum_probs=102.9
Q ss_pred cccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCC
Q 044483 77 DCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLN 156 (235)
Q Consensus 77 ~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d 156 (235)
.+..|.||||+|+..|+. +++++|++.++.... .+..|+||||+|+..|+.+++++|++.+.+. +.+|
T Consensus 6 ~~~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~ 73 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDI--PSVEYLLQNGSDPNV-------KDHAGWTPLHEACNHGHLKVVELLLQHKALV---NTTG 73 (137)
T ss_dssp CCTTCCCHHHHHHHHTCH--HHHHHHHHTTCCSCC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCC
T ss_pred cCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCc-------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc---cCcC
Confidence 356789999999999977 999999998765431 2334899999999999999999999988776 8899
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 157 EKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 157 ~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
..|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..++.
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~tpl~~A~~~~~~ 122 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLSYGAS-----RNAVNIFGLRPVDYTDDESMK 122 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCGGGGCCCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHhhccHH
Confidence 9999999999999999999999998754 899999999999999987764
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=2.8e-22 Score=149.01 Aligned_cols=114 Identities=23% Similarity=0.283 Sum_probs=101.3
Q ss_pred CCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCC
Q 044483 80 NKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE 159 (235)
Q Consensus 80 ~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g 159 (235)
+|.||||.|+..|+. +++++|++.++.... .+..|.||||+|+..|+.+++++|++.+++. +.+|..|
T Consensus 1 ~g~t~L~~A~~~~~~--~~v~~Ll~~~~~~~~-------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~g 68 (126)
T 1n0r_A 1 NGRTPLHLAARNGHL--EVVKLLLEAGADVNA-------KDKNGRTPLHLAARNGHLEVVKLLLEAGADV---NAKDKNG 68 (126)
T ss_dssp CCCCHHHHHHHHTCH--HHHHHHHHHTCCTTC-------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTS
T ss_pred CCccHHHHHHHcCcH--HHHHHHHHcCCCCCC-------cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC---cccCCCC
Confidence 478999999999977 999999997765431 2334899999999999999999999988776 8899999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 160 QNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 160 ~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.
T Consensus 69 ~t~l~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~l~~A~~~~~~ 114 (126)
T 1n0r_A 69 RTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGRTPLHLAARNGHL 114 (126)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCH
T ss_pred CcHHHHHHHcChHHHHHHHHHcCCC-----CcccCCCCCCHHHHHHHcCcH
Confidence 9999999999999999999998754 889999999999999999986
No 88
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=6.1e-23 Score=179.01 Aligned_cols=151 Identities=11% Similarity=-0.020 Sum_probs=118.6
Q ss_pred chHHHHHHhcCcHHHHHHHHhhChhhHHHHhccc-cccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccccc
Q 044483 43 ISIISLGLGKGNMLKAKKLVDFSAGELNELLLKK-DCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNW 121 (235)
Q Consensus 43 ~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~-~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~ 121 (235)
.+++|+|+..+..++++.|++.+. .+ +. .+..|.||||+|+..|+. ++|++|++.|++... .+.
T Consensus 98 ~~~~~~a~~~~~~~~~~~l~~~g~-----dv-n~~~d~~g~TpLh~Aa~~g~~--~~v~~Ll~~Gad~n~-------~d~ 162 (327)
T 1sw6_A 98 QQQQHVSFDSLLQEVNDAFPNTQL-----NL-NIPVDEHGNTPLHWLTSIANL--ELVKHLVKHGSNRLY-------GDN 162 (327)
T ss_dssp ------CHHHHHHHHHHHCTTSCC-----CS-CSCCSTTCCCHHHHHHHTTCH--HHHHHHHHTTCCTTB-------CCT
T ss_pred cchhHHHHHhhHHHHHHHHHhcCC-----Cc-ccccCCCCCcHHHHHHHcCCH--HHHHHHHHcCCCCCC-------cCC
Confidence 445688998888888888887766 22 33 577899999999999977 999999998876542 233
Q ss_pred CcchHHHHHHHcCC---HHHHHHHHHhCCCccccccCCCCCChHHHHHHH----cCCHHHHHHHHHhccccc--------
Q 044483 122 AFRLTLLFAASNGI---TEILKEIIHQHPQAILLDNLNEKEQNILHVSVK----RRQYKVFELIMKDMRLSV-------- 186 (235)
Q Consensus 122 ~g~TpLh~Aa~~g~---~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~----~g~~~iv~~Ll~~~~~~~-------- 186 (235)
.|+||||+|+..|+ .++++.|++.....+ +.+|..|+||||+|+. .|+.+++++|++.+....
T Consensus 163 ~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~--~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i 240 (327)
T 1sw6_A 163 MGESCLVKAVKSVNNYDSGTFEALLDYLYPCL--ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI 240 (327)
T ss_dssp TCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGG--GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCE
T ss_pred CCCCHHHHHHHhcccccHHHHHHHHHhhhccc--cCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHH
Confidence 59999999999999 788888888764445 8999999999999999 999999999997642000
Q ss_pred --------------------------------cccccCCCCCCCcHHHHHHhCCCC
Q 044483 187 --------------------------------PKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 187 --------------------------------~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
..+++.+|..|+||||+||+.|+.
T Consensus 241 ~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~ 296 (327)
T 1sw6_A 241 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNI 296 (327)
T ss_dssp EEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCH
T ss_pred HhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCH
Confidence 003889999999999999999996
No 89
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=1.9e-22 Score=157.20 Aligned_cols=117 Identities=9% Similarity=0.056 Sum_probs=102.2
Q ss_pred cccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCC
Q 044483 77 DCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLN 156 (235)
Q Consensus 77 ~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d 156 (235)
....|.||||+|+..|+. ++|++|++.++.... .+..|+||||+|+ .|+.+++++|++.+.+. +.+|
T Consensus 8 ~~~~~~t~L~~A~~~g~~--~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~---~~~d 74 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRV--EEVRALLEAGANPNA-------PNSYGRRPIQVMM-MGSARVAELLLLHGAEP---NCAD 74 (156)
T ss_dssp --CCSTTHHHHHHHHTCH--HHHHHHHTTTCCTTC-------CCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC---CCCC
T ss_pred CCccchHHHHHHHHcCCH--HHHHHHHHcCCCCCC-------CCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC---CCcC
Confidence 356788999999999987 999999998765431 2335899999986 99999999999988776 8999
Q ss_pred CCCCh-HHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCCC
Q 044483 157 EKEQN-ILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHYK 211 (235)
Q Consensus 157 ~~g~t-pLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~~ 211 (235)
..|+| |||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..|+..
T Consensus 75 ~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~tpl~~A~~~~~~~ 125 (156)
T 1bi7_B 75 PATLTRPVHDAAREGFLDTLVVLHRAGAR-----LDVRDAWGRLPVDLAEELGHRD 125 (156)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHHHTCC-----SSCCCTTCCCHHHHHHHHTCHH
T ss_pred CCCCcHHHHHHHHCCCHHHHHHHHHcCCC-----CcccCCCCCCHHHHHHHhCHHH
Confidence 99999 99999999999999999998764 8999999999999999999963
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=1.8e-22 Score=161.49 Aligned_cols=116 Identities=15% Similarity=0.096 Sum_probs=101.1
Q ss_pred cCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCC-C
Q 044483 79 TNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLN-E 157 (235)
Q Consensus 79 ~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d-~ 157 (235)
..|.||||+|+..|+. ++++.|++ ++..+. .+..|+||||+|+..|+.+++++|++.+++. +..| .
T Consensus 42 ~~g~t~L~~A~~~g~~--~~v~~Ll~-~~~~~~-------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~ 108 (183)
T 3deo_A 42 SEYETPWWTAARKADE--QALSQLLE-DRDVDA-------VDENGRTALLFVAGLGSDKCVRLLAEAGADL---DHRDMR 108 (183)
T ss_dssp HHHHHHHHHHHHTTCH--HHHHHHTT-TSCTTC-------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCSS
T ss_pred CCCCCHHHHHHHcCCH--HHHHHHHh-cCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CcCCCC
Confidence 4567999999999977 99999998 554331 2335999999999999999999999998876 7777 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCCCC
Q 044483 158 KEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHYKE 212 (235)
Q Consensus 158 ~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~~~ 212 (235)
.|+||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|++.|+...
T Consensus 109 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~tpl~~A~~~~~~~~ 158 (183)
T 3deo_A 109 GGLTALHMAAGYVRPEVVEALVELGAD-----IEVEDERGLTALELAREILKTTP 158 (183)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHHHTCC-----TTCCCTTSCCHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHhcCcHHHHHHHHHcCCC-----CcCCCCCCCCHHHHHHHhccCcc
Confidence 899999999999999999999998764 89999999999999999988753
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=1.3e-22 Score=154.53 Aligned_cols=128 Identities=13% Similarity=0.081 Sum_probs=107.2
Q ss_pred CCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcc
Q 044483 37 TTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYK 116 (235)
Q Consensus 37 ~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~ 116 (235)
..+.+|.||||.|+..|+.++++.|++.+. ..+..+..|.||||+|+..++. +++++|++.++....
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~----- 71 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGS------DPNVKDHAGWTPLHEACNHGHL--KVVELLLQHKALVNT----- 71 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTC------CSCCCCTTSCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-----
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCcCCCCCCCHHHHHHHcCCH--HHHHHHHHcCCcccC-----
Confidence 456679999999999999999999998876 2234467889999999999977 999999998775432
Q ss_pred cccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhc
Q 044483 117 KDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDM 182 (235)
Q Consensus 117 ~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~ 182 (235)
.+..|+||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..+..+++.+|.+..
T Consensus 72 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 72 --TGYQNDSPLHDAAKNGHVDIVKLLLSYGASR---NAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp --CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred --cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 2234899999999999999999999988776 899999999999999999999888877643
No 92
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=4.5e-22 Score=166.65 Aligned_cols=131 Identities=9% Similarity=-0.028 Sum_probs=99.9
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccc
Q 044483 40 SDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDK 119 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~ 119 (235)
.+|.||||.|+..|+.++++.|++ +. ..+..+..|.||||+|+..|+. ++|++|++.+++.+...
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~------~~~~~d~~g~t~L~~A~~~g~~--~~v~~Ll~~ga~~~~~~------ 107 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DR------DVDAVDENGRTALLFVAGLGSD--KCVRLLAEAGADLDHRD------ 107 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TC------CTTCBCTTSCBHHHHHHHHTCH--HHHHHHHHTTCCTTCCC------
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CC------CCCCcCCCCCCHHHHHHHCCCH--HHHHHHHHcCCCCCcCC------
Confidence 348999999999999999998887 44 2234566788999999998877 99999998877654211
Q ss_pred ccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCc
Q 044483 120 NWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYT 199 (235)
Q Consensus 120 ~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 199 (235)
+..|+||||+||..|+.++|++|++.+++. +.+|..|+||||+|+..+ .+..|.|
T Consensus 108 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~d~~g~t~l~~A~~~~----------------------~~~~~~~ 162 (244)
T 3ui2_A 108 MRGGLTALHMAAGYVRPEVVEALVELGADI---EVEDERGLTALELAREIL----------------------KTTPKGN 162 (244)
T ss_dssp SSSCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHH----------------------TTCCCSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCcHHHHHHHHH----------------------hccCCCC
Confidence 124889999999999999999999887776 788899999999987411 1134677
Q ss_pred HHHHHHhCCCC
Q 044483 200 LLHHVADMKHY 210 (235)
Q Consensus 200 pLHlAa~~g~~ 210 (235)
|||+|+..|+.
T Consensus 163 ~l~~a~~~g~~ 173 (244)
T 3ui2_A 163 PMQFGRRIGLE 173 (244)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHcChH
Confidence 77777777763
No 93
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=2.3e-23 Score=186.03 Aligned_cols=148 Identities=9% Similarity=0.011 Sum_probs=115.4
Q ss_pred CCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccc
Q 044483 39 SSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKD 118 (235)
Q Consensus 39 ~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~ 118 (235)
+.+++||||.|+..|+.++++.|++.++.. ......+..+.||||+|+..|+. ++|++|++.+++.... +.. .
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~---~~~~~~~~~~~tpL~~Aa~~G~~--eiv~~Ll~~gad~~~~-~i~-~ 161 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSD---EIVKVIQAENYQAFRLAAENGHL--HVLNRLCELAPTEIMA-MIQ-A 161 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CC---SSCC--CHHHHHHHHHHHHTTCH--HHHHHHHHSCTTTHHH-HHS-H
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcH---HHHHHhccCCCCHHHHHHHcCCH--HHHHHHHhCCCCcccc-ccC-C
Confidence 345789999999999999999999876510 00001133456899999999987 9999999987642110 110 1
Q ss_pred cccCcchHHHHHHHcCCHHHHHHHHHhCCCcccccc--CCCCCChHHHHHH-HcCCHHHHHHHHHhccccccccccCCCC
Q 044483 119 KNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDN--LNEKEQNILHVSV-KRRQYKVFELIMKDMRLSVPKWASRIDK 195 (235)
Q Consensus 119 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~--~d~~g~tpLh~Av-~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 195 (235)
. ++||||+||.+|+.++|++|++.+++. +. .|..|+||||+|+ .+|+.++|++|++.++
T Consensus 162 ~---~~TpLh~Aa~~G~~eiv~~Ll~~ga~~---~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga------------ 223 (376)
T 2aja_A 162 E---NYHAFRLAAENGHLHVLNRLCELAPTE---ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV------------ 223 (376)
T ss_dssp H---HHHHHHHHHHTTCHHHHHHHHHSCGGG---HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH------------
T ss_pred C---CCCHHHHHHHCCCHHHHHHHHHcCCcc---chhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC------------
Confidence 1 269999999999999999999998875 45 7888999999999 9999999999998652
Q ss_pred CCCcHHHHHHhCCCCC
Q 044483 196 KGYTLLHHVADMKHYK 211 (235)
Q Consensus 196 ~G~TpLHlAa~~g~~~ 211 (235)
.|+||||+|+..|+..
T Consensus 224 ~~~taL~~Aa~~g~~e 239 (376)
T 2aja_A 224 MLAYAEIHEFEYGEKY 239 (376)
T ss_dssp HHHHHHHCTTTTTTTT
T ss_pred ccchHHHHHHHCCCHH
Confidence 2899999999999964
No 94
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=3.6e-22 Score=163.97 Aligned_cols=113 Identities=10% Similarity=0.075 Sum_probs=53.7
Q ss_pred CCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHh-CCCccccccCCCC
Q 044483 80 NKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQ-HPQAILLDNLNEK 158 (235)
Q Consensus 80 ~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~d~~ 158 (235)
.|.||||+|+..|+. ++|++|++.++.... .+..|+||||+||..|+.++|++|++. +.+. +.+|..
T Consensus 72 ~g~t~L~~A~~~g~~--~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~---~~~d~~ 139 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNL--SWLRECLDNRVGVNG-------LDKAGSTALYWACHGGHKDIVEMLFTQPNIEL---NQQNKL 139 (222)
T ss_dssp EESCHHHHHHHHTCH--HHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC---CCCCTT
T ss_pred ccccccccccccCcH--HHHHHHHhCCCCccc-------cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc---cccCCC
Confidence 344555555555443 555555544433220 111245555555555555555555544 2222 445555
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCC
Q 044483 159 EQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKH 209 (235)
Q Consensus 159 g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~ 209 (235)
|+||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|+..|+
T Consensus 140 g~tpL~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~t~l~~A~~~~~ 185 (222)
T 3ehr_A 140 GDTALHAAAWKGYADIVQLLLAKGAR-----TDLRNIEKKLAFDMATNAAC 185 (222)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCC-----SCCCCTTSCCHHHHCCSHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-----CccccCCCCCHHHHhcchhH
Confidence 55555555555555555555554432 44455555555555555444
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=9.5e-22 Score=157.26 Aligned_cols=131 Identities=9% Similarity=-0.024 Sum_probs=108.9
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccc
Q 044483 40 SDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDK 119 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~ 119 (235)
.+|.||||.|+..|+.++++.|++ +. ..+..+..|.||||+|+..|+. +++++|++.+++.+.. .
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~------~~~~~d~~g~t~L~~A~~~~~~--~~v~~Ll~~ga~~~~~------~ 106 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DR------DVDAVDENGRTALLFVAGLGSD--KCVRLLAEAGADLDHR------D 106 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TS------CTTCCCTTSCCHHHHHHHHTCH--HHHHHHHHTTCCTTCC------C
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cC------CCCCcCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCcC------C
Confidence 359999999999999999999998 54 2244567899999999999987 9999999988765421 1
Q ss_pred ccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCc
Q 044483 120 NWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYT 199 (235)
Q Consensus 120 ~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 199 (235)
+..|+||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..++. ..+.|
T Consensus 107 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~---~~~d~~g~tpl~~A~~~~~~----------------------~~~~~ 161 (183)
T 3deo_A 107 MRGGLTALHMAAGYVRPEVVEALVELGADI---EVEDERGLTALELAREILKT----------------------TPKGN 161 (183)
T ss_dssp SSSSCCHHHHHHHTTCHHHHHHHHHHTCCT---TCCCTTSCCHHHHHHHHHHT----------------------CCCCS
T ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHcCCCC---cCCCCCCCCHHHHHHHhccC----------------------ccccc
Confidence 134899999999999999999999998876 89999999999999863221 34678
Q ss_pred HHHHHHhCCCC
Q 044483 200 LLHHVADMKHY 210 (235)
Q Consensus 200 pLHlAa~~g~~ 210 (235)
||++|+..|+.
T Consensus 162 ~l~~a~~~~~~ 172 (183)
T 3deo_A 162 PMQFGRRIGLE 172 (183)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHcCHH
Confidence 99999998875
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=6.2e-22 Score=162.52 Aligned_cols=121 Identities=12% Similarity=0.085 Sum_probs=96.7
Q ss_pred CCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhcccccc-----CCCChhhHHHhcCCChHHHHHHHHhc-CCcchhhhh
Q 044483 41 DKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCT-----NKGNMIKAKKFVDFSAGELVELFVKK-DCTNKAVHN 114 (235)
Q Consensus 41 ~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~-----~~~t~Lh~A~~~~~~~~~iv~~Ll~~-~~~~~~~~~ 114 (235)
.|.||||.|+..|+. ++++.++....+. .|.||||+|+..|+. ++|++|++. ++....
T Consensus 72 ~g~t~L~~A~~~g~~-----------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~~g~~~~~--- 135 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNL-----------SWLRECLDNRVGVNGLDKAGSTALYWACHGGHK--DIVEMLFTQPNIELNQ--- 135 (222)
T ss_dssp EESCHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH--HHHHHHTTSTTCCCCC---
T ss_pred ccccccccccccCcH-----------HHHHHHHhCCCCccccCCCCCCHHHHHHHcCCH--HHHHHHHcCCCCCccc---
Confidence 378999999999985 5666677765432 478999999999977 999999986 665431
Q ss_pred cccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccc
Q 044483 115 YKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRL 184 (235)
Q Consensus 115 ~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~ 184 (235)
.+..|+||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..|+.++++.|+..++.
T Consensus 136 ----~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 136 ----QNKLGDTALHAAAWKGYADIVQLLLAKGART---DLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp ----CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS---CCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred ----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---ccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 2335899999999999999999999998886 89999999999999999999999999987753
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.85 E-value=1.4e-21 Score=146.18 Aligned_cols=113 Identities=12% Similarity=0.079 Sum_probs=95.0
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhccccc
Q 044483 40 SDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDK 119 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~ 119 (235)
..|.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..++. +++++|++.+++... .
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~------~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~-------~ 69 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGED------VNRTLEGGRKPLHYAADCGQL--EILEFLLLKGADINA-------P 69 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCC------TTSCCTTSSCHHHHHHHTTCH--HHHHHHHTTTCCTTC-------C
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC------cCccCCCCCcHHHHHHHcCCH--HHHHHHHHcCCCCCc-------C
Confidence 4689999999999999999999988762 234466789999999999977 999999998776532 2
Q ss_pred ccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcC
Q 044483 120 NWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRR 170 (235)
Q Consensus 120 ~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g 170 (235)
+..|+||||+|+..|+.+++++|++.+++. +.+|..|+||||+|+..+
T Consensus 70 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 70 DKHHITPLLSAVYEGHVSCVKLLLSKGADK---TVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHhCCHH
Confidence 334899999999999999999999998876 899999999999994433
No 98
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=1.3e-21 Score=167.52 Aligned_cols=132 Identities=10% Similarity=0.093 Sum_probs=109.5
Q ss_pred CchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCC-ChHHHHHHHHhcCCcchhhhhcccccc
Q 044483 42 KISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDF-SAGELVELFVKKDCTNKAVHNYKKDKN 120 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~-~~~~iv~~Ll~~~~~~~~~~~~~~~~~ 120 (235)
..++|+.|+..|+.+.+..++..+.+....++....+..|.||||+|+..+. ...+++++|++.+++.+. .+
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-------~d 202 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-------QT 202 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-------CC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc-------cC
Confidence 5689999999999999999998877432222233446778999999999832 234999999998876542 23
Q ss_pred cCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhcc
Q 044483 121 WAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMR 183 (235)
Q Consensus 121 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~ 183 (235)
..|+||||+||..|+.++|++|++.+++. +.+|..|+||||+|+..|+.+++++|++.++
T Consensus 203 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad~---~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 203 GKGSTALHYCCLTDNAECLKLLLRGKASI---EIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 34999999999999999999999988876 8999999999999999999999999999875
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=1.7e-21 Score=163.12 Aligned_cols=144 Identities=13% Similarity=0.054 Sum_probs=113.9
Q ss_pred CCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccc
Q 044483 41 DKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKN 120 (235)
Q Consensus 41 ~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~ 120 (235)
.|.+++.+++..|+.+....+..... ..+..|.||||+|+..|+. ++|++|++ ++..+. .+
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~---------~~~~~g~t~L~~A~~~g~~--~~v~~Ll~-~~~~~~-------~d 74 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAA---------DVVSEYETPWWTAARKADE--QALSQLLE-DRDVDA-------VD 74 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCH---------HHHHHHHHHHHHHHTTTCH--HHHHHTTT-TCCTTC-------BC
T ss_pred CCccHHHHHHHcCCCccccccccccc---------ccccCCCCHHHHHHHcCCH--HHHHHHHc-CCCCCC-------cC
Confidence 45666667777776543322221111 1134578999999999977 99999998 654331 23
Q ss_pred cCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCC-CCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCc
Q 044483 121 WAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYT 199 (235)
Q Consensus 121 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d-~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 199 (235)
..|+||||+||..|+.++|++|++.+++. +..| ..|+||||+|+..|+.+++++|++.+++ ++.+|..|+|
T Consensus 75 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~d~~g~t 146 (244)
T 3ui2_A 75 ENGRTALLFVAGLGSDKCVRLLAEAGADL---DHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-----IEVEDERGLT 146 (244)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCCT---TCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCC---CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCc
Confidence 35999999999999999999999998886 7777 8899999999999999999999998764 8999999999
Q ss_pred HHHHHHhCCCCC
Q 044483 200 LLHHVADMKHYK 211 (235)
Q Consensus 200 pLHlAa~~g~~~ 211 (235)
|||+|++.++..
T Consensus 147 ~l~~A~~~~~~~ 158 (244)
T 3ui2_A 147 ALELAREILKTT 158 (244)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhcc
Confidence 999999987764
No 100
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=1.6e-21 Score=157.50 Aligned_cols=127 Identities=13% Similarity=0.013 Sum_probs=106.2
Q ss_pred CCCchHHHHHHhcCcH----HHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCCh----HHHHHHHHhcCCcchh
Q 044483 40 SDKISIISLGLGKGNM----LKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSA----GELVELFVKKDCTNKA 111 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~----~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~----~~iv~~Ll~~~~~~~~ 111 (235)
..|+||||+|+..|+. +++++|++.++ ..+..+..|.||||+|+..++.. .+++++|++.|++.+.
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Ga------dvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~ 109 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGA------DIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA 109 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTC------CSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCC------CCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc
Confidence 3599999999999985 58999999887 23455788999999999988642 4889999999887652
Q ss_pred hhhcccccccCcc-hHHHHHHHcC-----CHHHHHHHHH-hCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhc
Q 044483 112 VHNYKKDKNWAFR-LTLLFAASNG-----ITEILKEIIH-QHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDM 182 (235)
Q Consensus 112 ~~~~~~~~~~~g~-TpLh~Aa~~g-----~~~iv~~Ll~-~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~ 182 (235)
.+..|+ ||||+|+..| +.+++++|++ .+++. +.+|..|+||||+|++.|+.++|++|....
T Consensus 110 -------~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~---~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 110 -------LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL---LIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp -------CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT---TCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred -------cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 223488 9999999954 4679999999 77776 999999999999999999999999998764
No 101
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.85 E-value=1e-21 Score=163.37 Aligned_cols=116 Identities=12% Similarity=-0.009 Sum_probs=101.1
Q ss_pred ccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCC
Q 044483 78 CTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE 157 (235)
Q Consensus 78 ~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~ 157 (235)
...+.||||+|+..|+. ++|++|++.+++... .+..|+||||+||..|+.+++++|++.+++. +.+|.
T Consensus 18 ~~~~~t~L~~A~~~g~~--~~v~~Ll~~g~~~~~-------~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~---n~~d~ 85 (229)
T 2vge_A 18 RLNPLVLLLDAALTGEL--EVVQQAVKEMNDPSQ-------PNEEGITALHNAICGANYSIVDFLITAGANV---NSPDS 85 (229)
T ss_dssp TSCHHHHHHHHHHHTCH--HHHHHHHHHSSCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCT
T ss_pred ccchhHHHHHHHHcCCH--HHHHHHHhcCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCCCC
Confidence 44567899999999977 999999998775431 2335899999999999999999999998776 89999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhccccccccccCCC-CCCCcHHHHH--HhCCCC
Q 044483 158 KEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRID-KKGYTLLHHV--ADMKHY 210 (235)
Q Consensus 158 ~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d-~~G~TpLHlA--a~~g~~ 210 (235)
.|+||||+|+..|+.+++++|++.+++ ++.+| .+|+||||+| +..|+.
T Consensus 86 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~~g~tpL~~A~a~~~~~~ 136 (229)
T 2vge_A 86 HGWTPLHCAASCNDTVICMALVQHGAA-----IFATTLSDGATAFEKCDPYREGYA 136 (229)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCC-----TTCCCSSTTCCTGGGCCTTSTTHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-----cccccCCCCCCHHHHHHHHhcChH
Confidence 999999999999999999999998764 88876 6999999999 888875
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=3.2e-20 Score=165.20 Aligned_cols=151 Identities=10% Similarity=0.037 Sum_probs=108.6
Q ss_pred CCCchHHHHHHhc-CcHHHHHHHHhhChhhHHHHhccccc--cCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcc
Q 044483 40 SDKISIISLGLGK-GNMLKAKKLVDFSAGELNELLLKKDC--TNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYK 116 (235)
Q Consensus 40 ~~G~t~Lh~A~~~-g~~~~~~~ll~~~~~~~~~~l~~~~~--~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~ 116 (235)
..+.||||.|+.. |+.++++.|+..+++ + +..+ ..|.||||+|+..++. ++|++|++.+++.+.
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-----v-n~~~~~~~g~TpLh~Aa~~g~~--~iv~~LL~~Gadvn~----- 263 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGAD-----V-NWVNGGQDNATPLIQATAANSL--LACEFLLQNGANVNQ----- 263 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCC-----T-TCCCTTTTCCCHHHHHHHTTCH--HHHHHHHHTTCCTTC-----
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCC-----C-CccccccCCCCHHHHHHHCCCH--HHHHHHHHcCCCCCC-----
Confidence 3478999999999 999999999998872 2 2223 6788999999999977 999999998876542
Q ss_pred cccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCC
Q 044483 117 KDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKK 196 (235)
Q Consensus 117 ~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 196 (235)
.+..|+||||+|+..|+.+++++|++.+++. +..|..|+||||+|+..|+.+++++|+..+.. .......+..
T Consensus 264 --~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~---~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~--~~~~~~~~~~ 336 (368)
T 3jue_A 264 --ADSAGRGPLHHATILGHTGLACLFLKRGADL---GARDSEGRDPLTIAMETANADIVTLLRLAKMR--EAEAAQGQAG 336 (368)
T ss_dssp --CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------
T ss_pred --CCCCCCCHHHHHHHcCcHHHHHHHHHCcCCC---CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC--cccccccCCC
Confidence 2334899999999999999999999998876 89999999999999999999999999987632 2334456678
Q ss_pred CCcHHHHHHhCCCC
Q 044483 197 GYTLLHHVADMKHY 210 (235)
Q Consensus 197 G~TpLHlAa~~g~~ 210 (235)
|.|+|+++......
T Consensus 337 ~~t~l~i~~~~~~~ 350 (368)
T 3jue_A 337 DETYLDIFRDFSLM 350 (368)
T ss_dssp --------------
T ss_pred CCCHHHHHHHHHhh
Confidence 99999998887654
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=2.7e-20 Score=132.73 Aligned_cols=81 Identities=25% Similarity=0.338 Sum_probs=75.2
Q ss_pred cchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHH
Q 044483 123 FRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLH 202 (235)
Q Consensus 123 g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLH 202 (235)
|+||||+||..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++.+.+ ++.+|.+|+||||
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~---n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~t~l~ 73 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV---NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGRTPLH 73 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCCHHH
Confidence 789999999999999999999988776 89999999999999999999999999998764 8999999999999
Q ss_pred HHHhCCCCC
Q 044483 203 HVADMKHYK 211 (235)
Q Consensus 203 lAa~~g~~~ 211 (235)
+|+..|+.+
T Consensus 74 ~A~~~~~~~ 82 (93)
T 1n0q_A 74 LAARNGHLE 82 (93)
T ss_dssp HHHHTTCHH
T ss_pred HHHHcCCHH
Confidence 999999863
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=7.3e-20 Score=130.44 Aligned_cols=92 Identities=20% Similarity=0.274 Sum_probs=80.4
Q ss_pred CCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCC
Q 044483 80 NKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE 159 (235)
Q Consensus 80 ~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g 159 (235)
+|.||||+|+..++. +++++|++.+++.+. .+..|+||||+|+..|+.+++++|++.+++. +.+|..|
T Consensus 1 ~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~n~-------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~d~~g 68 (93)
T 1n0q_A 1 NGRTPLHLAARNGHL--EVVKLLLEAGADVNA-------KDKNGRTPLHLAARNGHLEVVKLLLEAGADV---NAKDKNG 68 (93)
T ss_dssp --CCHHHHHHHHTCH--HHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTS
T ss_pred CCCcHHHHHHHcCCH--HHHHHHHHcCCCCcc-------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CccCCCC
Confidence 368999999999977 999999998776542 2335899999999999999999999998876 8999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhcc
Q 044483 160 QNILHVSVKRRQYKVFELIMKDMR 183 (235)
Q Consensus 160 ~tpLh~Av~~g~~~iv~~Ll~~~~ 183 (235)
+||||+|+..|+.+++++|++.++
T Consensus 69 ~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 69 RTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999999998764
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=6.2e-20 Score=168.82 Aligned_cols=142 Identities=13% Similarity=0.052 Sum_probs=106.8
Q ss_pred CchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHh---cCCChHHHHHHHHhcCCcchhhhhcccc
Q 044483 42 KISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKF---VDFSAGELVELFVKKDCTNKAVHNYKKD 118 (235)
Q Consensus 42 G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~---~~~~~~~iv~~Ll~~~~~~~~~~~~~~~ 118 (235)
..+.||.|+..|+.++++.|+..+++.-........+..|.||||+|+. .|+. ++|++|++.|++.+.
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~--~~v~~Ll~~ga~vn~------- 202 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASL--PLVDFIIQNGGHLDA------- 202 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTH--HHHHHHHHHSCCTTC-------
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccH--HHHHHHHHcCCCCCc-------
Confidence 4578999999999999999999887210000001125678999999966 5655 999999998886542
Q ss_pred cccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCC
Q 044483 119 KNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGY 198 (235)
Q Consensus 119 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 198 (235)
.+..|+||||+||..|+.++|++|++.+++. +.+|..|+||||+|+..|+.+++++|++.+++ ++.
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~---~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-----~~~------ 268 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKGRALV---GTVNEAGETALDIARKKHHKECEELLEQAQAG-----TFA------ 268 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC---SCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---------------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC-----CCC------
Confidence 2335999999999999999999999998886 89999999999999999999999999998864 444
Q ss_pred cHHHHHHh
Q 044483 199 TLLHHVAD 206 (235)
Q Consensus 199 TpLHlAa~ 206 (235)
||+|.+..
T Consensus 269 ~~~h~~~~ 276 (497)
T 3lvq_E 269 FPLHVDYS 276 (497)
T ss_dssp --------
T ss_pred Ccceeecc
Confidence 56776654
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.80 E-value=2.2e-19 Score=153.63 Aligned_cols=160 Identities=11% Similarity=-0.011 Sum_probs=120.7
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHhhC-------h----h-hHHH------Hhcccccc-------CCCChhhHHHhcCCC
Q 044483 40 SDKISIISLGLGKGNMLKAKKLVDFS-------A----G-ELNE------LLLKKDCT-------NKGNMIKAKKFVDFS 94 (235)
Q Consensus 40 ~~G~t~Lh~A~~~g~~~~~~~ll~~~-------~----~-~~~~------~l~~~~~~-------~~~t~Lh~A~~~~~~ 94 (235)
.-+.++|+++...|+..+.+++...- + . .... .+.+.-.. ...++|+.|+..+..
T Consensus 64 ~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~d~ 143 (278)
T 1dcq_A 64 VLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTRDI 143 (278)
T ss_dssp CCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhccc
Confidence 34889999999999987766654211 0 0 0000 11111011 113689999999876
Q ss_pred hHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHc---CCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCC
Q 044483 95 AGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASN---GITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQ 171 (235)
Q Consensus 95 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~ 171 (235)
+.+..++..+....... .-..++..|+||||+||.. |+.+++++|++.+++. +.+|..|+||||+|+..|+
T Consensus 144 --~~~~~ll~~g~~~~~~~-~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i---n~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 144 --FGLLQAYADGVDLTEKI-PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL---DKQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp --HHHHHHHHTTCCTTSBC-CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT---TCCCTTCCCHHHHHHHTTC
T ss_pred --HHHHHHHHhhcchhhhc-cccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc---cccCCCCCCHHHHHHHcCC
Confidence 89999998776543110 0112234599999999999 9999999999998886 8999999999999999999
Q ss_pred HHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 172 YKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 172 ~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
.+++++|++.+++ ++.+|.+|+||||+|+..|+.
T Consensus 218 ~~~v~~Ll~~gad-----~~~~d~~g~tpL~~A~~~~~~ 251 (278)
T 1dcq_A 218 AECLKLLLRGKAS-----IEIANESGETPLDIAKRLKHE 251 (278)
T ss_dssp HHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCC-----CCCccCCCCCHHHHHHHcCCH
Confidence 9999999998765 999999999999999999996
No 107
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.79 E-value=1.3e-20 Score=168.10 Aligned_cols=145 Identities=10% Similarity=0.070 Sum_probs=105.1
Q ss_pred CchHHHHHHh-cCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccc
Q 044483 42 KISIISLGLG-KGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKN 120 (235)
Q Consensus 42 G~t~Lh~A~~-~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~ 120 (235)
+.++++.|.. .++.++++.++..+. .+.||||+|+..|+. ++|++|++.++...... ..+
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~-------------~~~T~Lh~Aa~~G~~--e~v~~Ll~~ga~~~~~~----~~~ 125 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGI-------------KSEVICFVAAITGCS--SALDTLCLLLTSDEIVK----VIQ 125 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTC-------------CHHHHHHHHHHHCCH--HHHHHHTTC--CCSSCC------C
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCC-------------CcCCHHHHHHHcCCH--HHHHHHHHcCCcHHHHH----Hhc
Confidence 4556666655 355555555544332 335999999999987 99999999776321100 112
Q ss_pred cCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccC--CCCCCC
Q 044483 121 WAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASR--IDKKGY 198 (235)
Q Consensus 121 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~--~d~~G~ 198 (235)
..|.||||+||.+|+.++|++|++.+++....+..+.+ +||||+|+.+|+.++|++|++.+++ ++. +|..|+
T Consensus 126 ~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~-----~~~~~~d~~g~ 199 (376)
T 2aja_A 126 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT-----EATAMIQAENY 199 (376)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG-----GHHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc-----cchhccCCCCC
Confidence 23789999999999999999999998752000222223 9999999999999999999998764 555 888999
Q ss_pred cHHHHHH-hCCCCC
Q 044483 199 TLLHHVA-DMKHYK 211 (235)
Q Consensus 199 TpLHlAa-~~g~~~ 211 (235)
||||+|| +.|+..
T Consensus 200 TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 200 YAFRWAAVGRGHHN 213 (376)
T ss_dssp HHHHHHHSTTCCHH
T ss_pred CHHHHHHHHCCCHH
Confidence 9999999 999964
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=4.6e-19 Score=157.71 Aligned_cols=115 Identities=10% Similarity=-0.007 Sum_probs=101.0
Q ss_pred CCChhhHHHhc-CCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCC
Q 044483 81 KGNMIKAKKFV-DFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE 159 (235)
Q Consensus 81 ~~t~Lh~A~~~-~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g 159 (235)
+.|+||.|+.. ++. +++++|++.+++.+.. +.+..|.||||+||..|+.++|++|++.+++. +..|..|
T Consensus 199 ~~t~L~~Aa~~~g~~--~~v~~LL~~Gadvn~~-----~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv---n~~d~~G 268 (368)
T 3jue_A 199 PGALLFRASGHPPSL--PTMADALAHGADVNWV-----NGGQDNATPLIQATAANSLLACEFLLQNGANV---NQADSAG 268 (368)
T ss_dssp HHHHHHHHTSSSCCH--HHHHHHHHTTCCTTCC-----CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCCTTS
T ss_pred CCcHHHHHHHccCCH--HHHHHHHHcCCCCCcc-----ccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC---CCCCCCC
Confidence 35799999998 766 9999999988765421 11134899999999999999999999998776 8999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 160 QNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 160 ~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
+||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|+..|+.
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~Gad-----~~~~d~~G~TpL~~A~~~g~~ 314 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRGAD-----LGARDSEGRDPLTIAMETANA 314 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHCcCC-----CCCcCCCCCCHHHHHHHCCCH
Confidence 9999999999999999999998764 899999999999999999996
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=9.3e-20 Score=134.49 Aligned_cols=108 Identities=14% Similarity=0.104 Sum_probs=91.8
Q ss_pred cccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCC
Q 044483 77 DCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLN 156 (235)
Q Consensus 77 ~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d 156 (235)
.+..|.||||+|+..++. +++++|++.++.... .+..|+||||+|+..|+.+++++|++.+++. +.+|
T Consensus 5 ~d~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~-------~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~d 72 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHA--EEVKKLLSKGADVNA-------RSKDGNTPLHLAAKNGHAEIVKLLLAKGADV---NARS 72 (115)
T ss_dssp CSCSSCCHHHHHHHHTCH--HHHHHHTTTTCCSSC-------CCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT---TCCC
T ss_pred cCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC---cccC
Confidence 356788999999999977 999999998765431 2334899999999999999999999988776 8899
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHH
Q 044483 157 EKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLL 201 (235)
Q Consensus 157 ~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 201 (235)
..|+||||+|+..|+.+++++|++.+++ ++.++..|.||-
T Consensus 73 ~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-----~n~~~~~~~~~~ 112 (115)
T 2l6b_A 73 KDGNTPEHLAKKNGHHEIVKLLDAKGAD-----VNARSWGSSHHH 112 (115)
T ss_dssp TTCCCTTHHHHTTTCHHHHHHHHTTSSS-----HHHHSCCCC---
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCC-----CCcCCccccccc
Confidence 9999999999999999999999998764 888999999873
No 110
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.78 E-value=5.8e-19 Score=152.70 Aligned_cols=118 Identities=15% Similarity=0.047 Sum_probs=99.9
Q ss_pred CChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHc---CCHHHHHHHHHhCCCccccccCCCC
Q 044483 82 GNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASN---GITEILKEIIHQHPQAILLDNLNEK 158 (235)
Q Consensus 82 ~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~d~~ 158 (235)
.++|+.|+..++. +.|+.|+..+.+..... .....+..|+||||+|+.. |+.+++++|++.++++ +.+|..
T Consensus 152 ~~~L~~A~~~g~~--~~v~~ll~~g~d~~~~~-~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv---n~~d~~ 225 (301)
T 2b0o_E 152 PQRLWTAICNRDL--LSVLEAFANGQDFGQPL-PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL---DAKAAD 225 (301)
T ss_dssp HHHHHHHHHTTCH--HHHHHHHHTTCCTTSCE-ECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT---TCCCTT
T ss_pred HHHHhhhhhccCH--HHHHHHHhcCCcccccC-CCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC---CCCCCC
Confidence 3569999999976 99999998776543210 0001234589999999997 9999999999998876 899999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 159 EQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 159 g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
|+||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|+..|+.
T Consensus 226 G~TpLh~A~~~g~~~~v~~Ll~~gad-----~~~~d~~G~TpL~~A~~~~~~ 272 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLLLKGRAL-----VGTVNEAGETALDIARKKHHK 272 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-----CSCCCTTSCCHHHHHHHHTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCCH
Confidence 99999999999999999999998764 899999999999999999996
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=5.7e-19 Score=162.39 Aligned_cols=118 Identities=15% Similarity=0.055 Sum_probs=101.5
Q ss_pred CChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHH---cCCHHHHHHHHHhCCCccccccCCCC
Q 044483 82 GNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAAS---NGITEILKEIIHQHPQAILLDNLNEK 158 (235)
Q Consensus 82 ~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~---~g~~~iv~~Ll~~~~~~~~~~~~d~~ 158 (235)
.+.||.|+..|+. ++|+.|++.+++.+... .....+..|+||||+||. .|+.++|++|++.+++. +.+|..
T Consensus 133 ~~~L~~A~~~g~~--~~v~~ll~~g~~~n~~~-~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v---n~~d~~ 206 (497)
T 3lvq_E 133 PQRLWTAICNRDL--LSVLEAFANGQDFGQPL-PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL---DAKAAD 206 (497)
T ss_dssp HHHHHHHHHHTCH--HHHHHHHHTTCCSSSCB-CCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT---TCCCSS
T ss_pred HHHHHHHHhccCH--HHHHHHHhhcccccCCC-CCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC---CccCCC
Confidence 3679999999977 99999999887654210 111123459999999976 99999999999999886 999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHHHHHHhCCCC
Q 044483 159 EQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLLHHVADMKHY 210 (235)
Q Consensus 159 g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLHlAa~~g~~ 210 (235)
|+||||+|+..|+.++|++|++.+++ ++.+|.+|+||||+|+..|+.
T Consensus 207 g~TpLh~A~~~g~~~~v~~Ll~~ga~-----~~~~d~~g~tpl~~A~~~~~~ 253 (497)
T 3lvq_E 207 GNTALHYAALYNQPDCLKLLLKGRAL-----VGTVNEAGETALDIARKKHHK 253 (497)
T ss_dssp SCCHHHHHTTTTCHHHHHHHHHTCCC-----CSCCCTTCCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCCH
Confidence 99999999999999999999998865 999999999999999999996
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=3e-18 Score=126.09 Aligned_cols=81 Identities=17% Similarity=0.203 Sum_probs=75.7
Q ss_pred CcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHHHHHHHcCCHHHHHHHHHhccccccccccCCCCCCCcHH
Q 044483 122 AFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVSVKRRQYKVFELIMKDMRLSVPKWASRIDKKGYTLL 201 (235)
Q Consensus 122 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpLh~Av~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 201 (235)
.|.||||+||..|+.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|+|||
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~i---~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~tpl 94 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGADV---AAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-----VXAQDKFGKTAF 94 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCC---CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----ccccccCCCcHH
Confidence 4889999999999999999999988775 88999999999999999999999999998754 899999999999
Q ss_pred HHHHhCCCC
Q 044483 202 HHVADMKHY 210 (235)
Q Consensus 202 HlAa~~g~~ 210 (235)
|+|+..|+.
T Consensus 95 ~~A~~~~~~ 103 (110)
T 2zgd_A 95 DISIDNGNE 103 (110)
T ss_dssp HHHHHHTCH
T ss_pred HHHHHcCCH
Confidence 999999986
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.74 E-value=3.4e-18 Score=126.02 Aligned_cols=110 Identities=16% Similarity=0.116 Sum_probs=90.5
Q ss_pred cCCCCCCchHHHHHHhcCcHHHHHHHHhhChhhHHHHhccccccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhc
Q 044483 36 STTSSDKISIISLGLGKGNMLKAKKLVDFSAGELNELLLKKDCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNY 115 (235)
Q Consensus 36 ~~~~~~G~t~Lh~A~~~g~~~~~~~ll~~~~~~~~~~l~~~~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~ 115 (235)
.+.+.+|.||||.|+..|+.++++.|++.+.+ .+..+..|.||||+|+..++. +++++|++.++....
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~--~~~~~Ll~~g~~~~~---- 70 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD------VNARSKDGNTPLHLAAKNGHA--EIVKLLLAKGADVNA---- 70 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC------SSCCCSSSCCTTHHHHTTTCH--HHHHHHTTTTCCTTC----
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCcH--HHHHHHHHcCCCCcc----
Confidence 45677899999999999999999999988762 234467889999999999977 999999998775431
Q ss_pred ccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCCChHH
Q 044483 116 KKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNIL 163 (235)
Q Consensus 116 ~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d~~g~tpL 163 (235)
.+..|+||||+|+..|+.+++++|++.+++. +.++..|.+|-
T Consensus 71 ---~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~---n~~~~~~~~~~ 112 (115)
T 2l6b_A 71 ---RSKDGNTPEHLAKKNGHHEIVKLLDAKGADV---NARSWGSSHHH 112 (115)
T ss_dssp ---CCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH---HHHSCCCC---
T ss_pred ---cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC---CcCCccccccc
Confidence 2334899999999999999999999988876 88899998873
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=5.9e-17 Score=119.09 Aligned_cols=90 Identities=14% Similarity=0.189 Sum_probs=77.4
Q ss_pred cccCCCChhhHHHhcCCChHHHHHHHHhcCCcchhhhhcccccccCcchHHHHHHHcCCHHHHHHHHHhCCCccccccCC
Q 044483 77 DCTNKGNMIKAKKFVDFSAGELVELFVKKDCTNKAVHNYKKDKNWAFRLTLLFAASNGITEILKEIIHQHPQAILLDNLN 156 (235)
Q Consensus 77 ~~~~~~t~Lh~A~~~~~~~~~iv~~Ll~~~~~~~~~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~d 156 (235)
.+..|.||||+|+..|+. +++++|++.++.... .+..|+||||+||..|+.+++++|++.+++. +.+|
T Consensus 20 ~~~~g~t~L~~A~~~g~~--~~v~~Ll~~g~~i~~-------~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~---~~~d 87 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQD--DEVRILMANGADVAA-------KDKNGSTPLHLAARNGHLEVVKLLLEAGADV---XAQD 87 (110)
T ss_dssp --CCHHHHHHHHHHHTCH--HHHHHHHHTTCCTTC-------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCC
T ss_pred cCCccchHHHHHHHcCCH--HHHHHHHHcCCCCCc-------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc---cccc
Confidence 356788999999999977 999999998765431 2334899999999999999999999988775 8999
Q ss_pred CCCChHHHHHHHcCCHHHHHHH
Q 044483 157 EKEQNILHVSVKRRQYKVFELI 178 (235)
Q Consensus 157 ~~g~tpLh~Av~~g~~~iv~~L 178 (235)
..|+||||+|+..|+.+++++|
T Consensus 88 ~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 88 KFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999986
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=21.26 E-value=67 Score=18.31 Aligned_cols=20 Identities=25% Similarity=0.199 Sum_probs=16.0
Q ss_pred hHHHHHHHcCCHHHHHHHHH
Q 044483 125 LTLLFAASNGITEILKEIIH 144 (235)
Q Consensus 125 TpLh~Aa~~g~~~iv~~Ll~ 144 (235)
.-+..||+.|..+.++.|-.
T Consensus 15 QqiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHH
Confidence 55688899999998888754
Done!